HHsearch results for GI: 254780949 and protein with PDBid: 3jxe_A
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.1e-37 Score=263.02 Aligned_cols=280 Identities=12% Similarity=0.104 Sum_probs=209.8
Q ss_pred HHHCCCHHHCCCHHHHHH-HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHC-CCEEEEEEECHHHCCCCCCCCCC
Q ss_conf 996892002299899999-8514981899984378762024348999999999985-98499998260111448898862
Q gi|254780949|r 12 LSERGFIHQISNPRELDI-LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDE 89 (418)
Q Consensus 12 L~~Rg~i~~~~~~~~l~~-~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~-Gh~~i~liG~~T~~IGDPsgk~~ 89 (418)
+..||++-.-.+-+.+-+ +-++++..+|+||+|||+ +||||++++++++++|+. |+.++++++|.++...++.
T Consensus 49 ~~rRgi~f~hrd~d~il~~~~~g~~~~vytG~~PSG~-lHLGh~i~~~~~~~~q~~~~~~~~i~iaD~~~~~~~~~---- 123 (392)
T 3jxe_A 49 FFRRKFFFSHRDYDLILKDYEEGRGFFLYTGRGPSGP-MHIGHIIPFFATKWLQEKFGVNLYIQITDDEKFLFKEN---- 123 (392)
T ss_dssp HHHTTSEEEEESHHHHHHHHHTTCCCEEEEEECCSSC-CBHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHCSS----
T ss_pred HHHCCEEEECCCHHHHHHHHHCCCCCEEEECCCCCCH-HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHCCCC----
T ss_conf 6752502003689999999972998089968689837-48998999999999997169866999961277652579----
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 10246889999999999999887653267776402330167523431346888752234478753478888740356883
Q gi|254780949|r 90 SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169 (418)
Q Consensus 90 ~R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~i 169 (418)
.+.+++..++.. .+..++..+-++.++.|..+++|.. +.+.. +.++++.....++.++.-..++
T Consensus 124 ----~~~~~~~~~~~e---~~~~~lA~GlDp~kt~i~~~s~~~~---~~~l~------~~l~~~~~~~~~~~~~~~~~~~ 187 (392)
T 3jxe_A 124 ----LTFDDTKRWAYD---NILDIIAVGFDPDKTFIFQNSEFTK---IYEMA------IPIAKKINFSMAKAVFGFTEQS 187 (392)
T ss_dssp ----CCHHHHHHHHHH---HHHHHHTTCCCTTSEEEEETTTSTH---HHHHH------HHHHHHSBHHHHHHHHCCCTTS
T ss_pred ----CCHHHHHHHHHH---HHHHHHHCCCCCCCEEEEECCCCHH---HHHHH------HHHHHHCCHHHHHHCCCCCCCC
T ss_conf ----999999999999---9999998089920359997131157---78887------8898515516665311244455
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCC---HHHHHHHHCCCC
Q ss_conf 15788989898999999985429702015412588998889999731679717983110236871---022354310123
Q gi|254780949|r 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG---TKMGKTLSGAIW 246 (418)
Q Consensus 170 s~~EF~Y~llQayD~~~L~~~~~~~iqiGGsDQwgNi~~G~eLir~~~~~~~~glT~PLLt~~dG---~KmgKS~~naIw 246 (418)
++.+|+||+|||+|.++++.+ ++..||.||+.++..+||+++|++..+...++.|++.+..| +|++++.+|+|+
T Consensus 188 ~~g~~~YP~lQaaDil~~~~~---~~VPvG~DQ~~h~~LtRdia~r~n~~~~~~~~~~~ip~l~G~~gKmssS~~~s~I~ 264 (392)
T 3jxe_A 188 KIGMIFFPAIQIAPTFFERKR---CLIPAAIDQDPYWRLQRDFAESLGYYKTAALHSKFVPSLTSLSGKMSASKPETAIY 264 (392)
T ss_dssp BHHHHHHHHHHHGGGGSSSSC---EEEEEEGGGHHHHHHHHHHTGGGTSCCCEEEEECCCCCSSCSSSCCCTTSGGGCCB
T ss_pred CCCCCCCCHHHHCCHHCCCCC---EEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 655446703332320113567---06324477789999999999752788873345432335688766665467888745
Q ss_pred CCC----------------CCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHH-H--CCCCHHHHHHHHHHH
Q ss_conf 334----------------579979999988620788898799750688856755543332-1--022026889899999
Q gi|254780949|r 247 LNK----------------EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ-G--KEINEAKKIIATEIT 307 (418)
Q Consensus 247 Ld~----------------~~tSPy~fyQf~~n~~D~dV~kyLklfT~l~l~EI~~l~~~~-~--~~pr~aKk~LA~EiT 307 (418)
|.. ...++++.++++-|.++..|..|+++|+..+.++++++.+.- + -.+.++|+.||+.|+
T Consensus 265 L~D~pe~i~~KI~k~~~~~g~~~~~e~~~~~g~p~~~~v~~~l~~f~~~d~~~l~e~~~~y~~G~l~~ge~K~~lae~l~ 344 (392)
T 3jxe_A 265 LTDSPEDVEKKVWKFTLTGGRPTLKEQREKGGEPEKCVVFKWLEIFFEEDDKKLKERYYACKNGELTCGECKRYLISKIQ 344 (392)
T ss_dssp TTCCHHHHHHHHHTCC--------------------CHHHHHHHHTTCCCHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 05899999999974137899860001100368843347999999873899999999999875489898999999999999
Q ss_pred HHHHHHCH
Q ss_conf 97300000
Q gi|254780949|r 308 TMVHGREE 315 (418)
Q Consensus 308 ~lvHGe~~ 315 (418)
++++.-..
T Consensus 345 ~~l~~~~e 352 (392)
T 3jxe_A 345 EFLKEHQR 352 (392)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99899999