PSIBLAST alignment of GI: 254780949 and protein with PDB id: 1y42
>gi|61680508|pdb|1Y42|X Chain X, Crystal Structure Of A C-Terminally Truncated Cyt-18 Protein Length = 392
>gi|164519509|pdb|2RKJ|A Chain A, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing Factor With A Group I Intron Rna Length = 392
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 107/357 (29%), Positives = 175/357 (49%), Gaps = 31/357 (8%)
Query: 5 KSDFLSILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
K + + ERG++ + + L + AY+G D TA SLH GHL LM LFW+
Sbjct: 33 KQNTWDLFEERGYVKDTAGTKEHIAELMRTRRIGAYVGIDPTAPSLHVGHLLPLMPLFWM 92
Query: 64 QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
G+K +L+GG T+ IGDP+ R +SR + S + N+ KI + + A
Sbjct: 93 YLEGYKAFTLIGGSTAKIGDPTGRLKSRDHLSSSDATMNMTKIHYQLKKLWENVDTQMRA 152
Query: 124 L-----------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
++NN W +++LR +G + MLS ++V++++ + +SF
Sbjct: 153 RGYEADWARKRGIVNNNHWWNKQPMLEVLRRVGHALRIGPMLSRDTVKNKMTQGDGVSFA 212
Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-----------------R 215
EF Y I+Q +D+ EL ++Q+GGSDQ+GNII G+++ + +
Sbjct: 213 EFTYPIMQGWDWFELFYQQGVQMQIGGSDQYGNIISGLEVVKAARESEPDPQERKYVTPK 272
Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
+ T PLLT +SG K GK+ AIWL+ TS ++F+ Y+ D +V + K
Sbjct: 273 TALDECVGFTVPLLTDSSGAKFGKSAGNAIWLDPYQTSVFDFYGYFVRRSDQEVENLLKL 332
Query: 276 LTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
T +P+SEI + + A+ +A E+ T+VHG++EA A +
Sbjct: 333 FTFMPISEITKTMEEHIKDPSKRVAQHTLAREVVTLVHGKQEASAAEDQHRMMYTGQ 389