RPSBLAST alignment of GI: 254780949 and protein with PDBid: 3hzr
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural genomics of pathogenic protozoa, MSGPP; 3.00A {Entamoeba histolytica} Length = 386
Score = 61.6 bits (149), Expect = 3e-10
Identities = 32/312 (10%), Positives = 80/312 (25%), Gaps = 47/312 (15%)
Query: 39 YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS-LMGGGTSIIGDPSFRDESRRMMRSQ 97
+I + L +LQ + + + ++ + +E+ +M
Sbjct: 86 FIQKYPQ-KEVALEEYITLEFARYLQDAFNIQVIIQILDDIKVLNREATINEASKMSN-- 142
Query: 98 EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
+ ++ + +G + + + + + L V + ++
Sbjct: 143 ---DLMKY-------ILAFGFNEDKTFIYTDYQYFGKMYRTISL--------VEKATAYN 184
Query: 158 SVRSRLKREQSLSFLEFNYMILQAYD-----FVELAKNYDCRLQMGGSDQWGNIICGIDL 212
V+ E S + + + + + L + +
Sbjct: 185 VVQPFFNFEYSDNIGKLASPSIMTASMFSQSYSHFFSSPARCLVLDSIKNVQFHSIIDQI 244
Query: 213 GERLKTPKLFALTSPL--LTTASGTKMGKTLSGAIWL-----------NKEMTSP----- 254
L + L + L + + +I L NK S
Sbjct: 245 ATTLNFIQPTVLFHKMVPLLSGVTKFDIPSDHNSILLSDNAKQVERKINKLAFSGGRNTT 304
Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITTMVHG 312
+ D ++ D K E+ E KKI++ + +
Sbjct: 305 EEHKKLGGQCDIDVSFQLLNIFSSDNAQVKDVEEKYSKGELLSGELKKIVSASMKDFIVA 364
Query: 313 REEAEKAATAAM 324
+ +K T A
Sbjct: 365 YDAKKKPITTAY 376