Query gi|254780951|ref|YP_003065364.1| hypothetical protein CLIBASIA_04250 [Candidatus Liberibacter asiaticus str. psy62] Match_columns 49 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 13730 Date Wed Jun 1 10:49:34 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780951.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1i25a_ g.3.6.2 (A:) Huwentoxi 14.2 25 0.0018 15.5 0.8 24 18-41 5-28 (37) 2 d1ywfa1 c.45.1.5 (A:4-275) Pho 3.7 81 0.0059 13.0 -0.6 14 13-26 149-162 (272) 3 d2q07a2 c.18.1.4 (A:244-393) U 3.5 90 0.0065 12.8 -0.4 10 17-26 19-28 (150) 4 d1dsqa_ g.40.1.1 (A:) Nucleic 2.5 1.4E+02 0.011 11.8 -0.3 15 15-30 2-16 (26) 5 d1d0da_ g.8.1.2 (A:) Anticoagu 1.5 3.2E+02 0.023 10.2 0.2 17 13-29 5-23 (60) 6 d2fh1a3 d.109.1.1 (A:629-741) 1.5 2.4E+02 0.018 10.8 -0.5 14 14-27 10-23 (113) 7 d1ecib_ a.33.1.1 (B:) Ectatomi 1.3 3.7E+02 0.027 9.9 1.2 20 8-27 3-22 (34) 8 d1xria_ c.45.1.1 (A:) Putative 1.2 3.3E+02 0.024 10.1 -0.4 11 16-26 94-104 (151) 9 d1oysa1 d.14.1.4 (A:1-151) Rib 1.1 4.2E+02 0.031 9.6 1.5 15 10-24 137-151 (151) 10 d1avgi_ b.60.1.3 (I:) Thrombin 1.1 3E+02 0.022 10.3 -0.8 15 17-31 108-122 (142) No 1 >d1i25a_ g.3.6.2 (A:) Huwentoxin-II {Chinese bird spider (Selenocosmia huwena) [TaxId: 29017]} Probab=14.20 E-value=25 Score=15.48 Aligned_cols=24 Identities=38% Similarity=0.538 Sum_probs=16.8 Q ss_pred HHHCCCCCCCHHHCCHHHCCCCCC Q ss_conf 631136336211120111026100 Q gi|254780951|r 18 LFSCSSKKGGEKKGAEKKTSAPLK 41 (49) Q Consensus 18 lfscsskkggekkgaekktsaplk 41 (49) -|||.-+|.|++.-.+|+-+.-.+ T Consensus 5 s~scei~k~g~~pck~kkc~ggwk 28 (37) T d1i25a_ 5 SFSCEIEKEGDKPCKKKKCKGGWK 28 (37) T ss_dssp SSCSSSSBCSSSBCBCCCCCTTEE T ss_pred EEEEEECCCCCCCCCCCCCCCCCE T ss_conf 688786006888776341777744 No 2 >d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]} Probab=3.67 E-value=81 Score=13.04 Aligned_cols=14 Identities=36% Similarity=0.494 Sum_probs=9.9 Q ss_pred HHHHHHHHCCCCCC Q ss_conf 76135631136336 Q gi|254780951|r 13 AISPLLFSCSSKKG 26 (49) Q Consensus 13 aispllfscsskkg 26 (49) .-.|+||.|+.-|. T Consensus 149 ~~~pvL~HCtaGKD 162 (272) T d1ywfa1 149 AGRPVLTHCFAGKD 162 (272) T ss_dssp TTCCEEEECSSSSS T ss_pred CCCCEEEECCCCCC T ss_conf 59977985278883 No 3 >d2q07a2 c.18.1.4 (A:244-393) Uncharacterized protein AF0587 {Archaeoglobus fulgidus [TaxId: 2234]} Probab=3.54 E-value=90 Score=12.83 Aligned_cols=10 Identities=40% Similarity=0.959 Sum_probs=4.8 Q ss_pred HHHHCCCCCC Q ss_conf 5631136336 Q gi|254780951|r 17 LLFSCSSKKG 26 (49) Q Consensus 17 llfscsskkg 26 (49) +|+-||.+|- T Consensus 19 vllPCSa~KP 28 (150) T d2q07a2 19 LLLPCTARKP 28 (150) T ss_dssp EEEECCSSSS T ss_pred EEEECCCCCC T ss_conf 9953666788 No 4 >d1dsqa_ g.40.1.1 (A:) Nucleic acid binding protein p14 {Mouse mammary tumor virus [TaxId: 11757]} Probab=2.47 E-value=1.4e+02 Score=11.83 Aligned_cols=15 Identities=47% Similarity=0.913 Sum_probs=8.4 Q ss_pred HHHHHHCCCCCCCHHH Q ss_conf 1356311363362111 Q gi|254780951|r 15 SPLLFSCSSKKGGEKK 30 (49) Q Consensus 15 spllfscsskkggekk 30 (49) .|.-|||. |.|--++ T Consensus 2 gpvcfscg-ktghikk 16 (26) T d1dsqa_ 2 GPVCFSCG-KTGHIKR 16 (26) T ss_dssp CCBCTTTC-CBSSCTT T ss_pred CCEEEECC-CCCCCHH T ss_conf 98777568-7665113 No 5 >d1d0da_ g.8.1.2 (A:) Anticoagulant protein, factor Xa inhibitor {Soft tick (Ornithodoros moubata) [TaxId: 6938]} Probab=1.46 E-value=3.2e+02 Score=10.17 Aligned_cols=17 Identities=41% Similarity=0.892 Sum_probs=10.9 Q ss_pred HHHHHHH--HCCCCCCCHH Q ss_conf 7613563--1136336211 Q gi|254780951|r 13 AISPLLF--SCSSKKGGEK 29 (49) Q Consensus 13 aispllf--scsskkggek 29 (49) .|.|--| .|++..||++ T Consensus 5 cikp~d~~~~c~~~e~~~~ 23 (60) T d1d0da_ 5 CIKPRDWIDECDSNEGGER 23 (60) T ss_dssp GSCCTTCCCCCCGGGTCEE T ss_pred CCCHHHHHHHCCCCCCCEE T ss_conf 2383776754457778437 No 6 >d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Probab=1.46 E-value=2.4e+02 Score=10.75 Aligned_cols=14 Identities=50% Similarity=0.880 Sum_probs=9.8 Q ss_pred HHHHHHHCCCCCCC Q ss_conf 61356311363362 Q gi|254780951|r 14 ISPLLFSCSSKKGG 27 (49) Q Consensus 14 ispllfscsskkgg 27 (49) -.|-||.|+..+|. T Consensus 10 ~~prLf~~~~~~g~ 23 (113) T d2fh1a3 10 HPPRLFACSNKIGR 23 (113) T ss_dssp CCCEEEEEECTTSS T ss_pred CCCEEEEEECCCCC T ss_conf 89879999869998 No 7 >d1ecib_ a.33.1.1 (B:) Ectatomin subunit B, EB {Ant (Ectatomma tuberculatum), venom [TaxId: 39300]} Probab=1.25 E-value=3.7e+02 Score=9.87 Aligned_cols=20 Identities=40% Similarity=0.507 Sum_probs=0.0 Q ss_pred HHHHHHHHHHHHHCCCCCCC Q ss_conf 89999761356311363362 Q gi|254780951|r 8 TVLMLAISPLLFSCSSKKGG 27 (49) Q Consensus 8 tvlmlaispllfscsskkgg 27 (49) |+.-|.|.|-|-|-..|-.| T Consensus 3 tivklticptlksmakkceg 22 (34) T d1ecib_ 3 TIVKLTICPTLKSMAKKCEG 22 (34) T ss_dssp SHHHHHHHHHHHHHHTTBST T ss_pred CEEEEEECCHHHHHHHHCCC T ss_conf 04788756008999987121 No 8 >d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=1.20 E-value=3.3e+02 Score=10.11 Aligned_cols=11 Identities=36% Similarity=0.797 Sum_probs=0.0 Q ss_pred HHHHHCCCCCC Q ss_conf 35631136336 Q gi|254780951|r 16 PLLFSCSSKKG 26 (49) Q Consensus 16 pllfscsskkg 26 (49) |+||.|..-|+ T Consensus 94 pvlvHC~~Gkd 104 (151) T d1xria_ 94 PVLIHCKRGKH 104 (151) T ss_dssp SEEEECSSSSS T ss_pred CEEEECCCCCH T ss_conf 77877489840 No 9 >d1oysa1 d.14.1.4 (A:1-151) Ribonuclease PH, domain 1 {Bacillus subtilis [TaxId: 1423]} Probab=1.12 E-value=4.2e+02 Score=9.61 Aligned_cols=15 Identities=27% Similarity=0.370 Sum_probs=0.0 Q ss_pred HHHHHHHHHHHCCCC Q ss_conf 999761356311363 Q gi|254780951|r 10 LMLAISPLLFSCSSK 24 (49) Q Consensus 10 lmlaispllfscssk 24 (49) ||-|+.+|..+|+-| T Consensus 137 L~dA~~~~~~~~~i~ 151 (151) T d1oysa1 137 MAIAIGKLIKAGTIK 151 (151) T ss_dssp HHHHHHHHHHTTSSS T ss_pred HHHHHHHHHHCCCCC T ss_conf 999988898747859 No 10 >d1avgi_ b.60.1.3 (I:) Thrombin inhibitor {Triatomine bug (Triatoma pallidipennis) [TaxId: 30077]} Probab=1.09 E-value=3e+02 Score=10.30 Aligned_cols=15 Identities=13% Similarity=0.109 Sum_probs=0.0 Q ss_pred HHHHCCCCCCCHHHC Q ss_conf 563113633621112 Q gi|254780951|r 17 LLFSCSSKKGGEKKG 31 (49) Q Consensus 17 llfscsskkggekkg 31 (49) |++||..+.++.+.. T Consensus 108 lVysC~~~~~~~~~d 122 (142) T d1avgi_ 108 LVCRSITFTSQPKED 122 (142) T ss_dssp EEEEEEEESSSCCCE T ss_pred EEEEEECCCCCCCCC T ss_conf 999983159983332 Done!