Query         gi|254780951|ref|YP_003065364.1| hypothetical protein CLIBASIA_04250 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 49
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 13730
Date          Wed Jun  1 10:49:34 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780951.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1i25a_ g.3.6.2 (A:) Huwentoxi  14.2      25  0.0018   15.5   0.8   24   18-41      5-28  (37)
  2 d1ywfa1 c.45.1.5 (A:4-275) Pho   3.7      81  0.0059   13.0  -0.6   14   13-26    149-162 (272)
  3 d2q07a2 c.18.1.4 (A:244-393) U   3.5      90  0.0065   12.8  -0.4   10   17-26     19-28  (150)
  4 d1dsqa_ g.40.1.1 (A:) Nucleic    2.5 1.4E+02   0.011   11.8  -0.3   15   15-30      2-16  (26)
  5 d1d0da_ g.8.1.2 (A:) Anticoagu   1.5 3.2E+02   0.023   10.2   0.2   17   13-29      5-23  (60)
  6 d2fh1a3 d.109.1.1 (A:629-741)    1.5 2.4E+02   0.018   10.8  -0.5   14   14-27     10-23  (113)
  7 d1ecib_ a.33.1.1 (B:) Ectatomi   1.3 3.7E+02   0.027    9.9   1.2   20    8-27      3-22  (34)
  8 d1xria_ c.45.1.1 (A:) Putative   1.2 3.3E+02   0.024   10.1  -0.4   11   16-26     94-104 (151)
  9 d1oysa1 d.14.1.4 (A:1-151) Rib   1.1 4.2E+02   0.031    9.6   1.5   15   10-24    137-151 (151)
 10 d1avgi_ b.60.1.3 (I:) Thrombin   1.1   3E+02   0.022   10.3  -0.8   15   17-31    108-122 (142)

No 1  
>d1i25a_ g.3.6.2 (A:) Huwentoxin-II {Chinese bird spider (Selenocosmia huwena) [TaxId: 29017]}
Probab=14.20  E-value=25  Score=15.48  Aligned_cols=24  Identities=38%  Similarity=0.538  Sum_probs=16.8

Q ss_pred             HHHCCCCCCCHHHCCHHHCCCCCC
Q ss_conf             631136336211120111026100
Q gi|254780951|r   18 LFSCSSKKGGEKKGAEKKTSAPLK   41 (49)
Q Consensus        18 lfscsskkggekkgaekktsaplk   41 (49)
                      -|||.-+|.|++.-.+|+-+.-.+
T Consensus         5 s~scei~k~g~~pck~kkc~ggwk   28 (37)
T d1i25a_           5 SFSCEIEKEGDKPCKKKKCKGGWK   28 (37)
T ss_dssp             SSCSSSSBCSSSBCBCCCCCTTEE
T ss_pred             EEEEEECCCCCCCCCCCCCCCCCE
T ss_conf             688786006888776341777744


No 2  
>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=3.67  E-value=81  Score=13.04  Aligned_cols=14  Identities=36%  Similarity=0.494  Sum_probs=9.9

Q ss_pred             HHHHHHHHCCCCCC
Q ss_conf             76135631136336
Q gi|254780951|r   13 AISPLLFSCSSKKG   26 (49)
Q Consensus        13 aispllfscsskkg   26 (49)
                      .-.|+||.|+.-|.
T Consensus       149 ~~~pvL~HCtaGKD  162 (272)
T d1ywfa1         149 AGRPVLTHCFAGKD  162 (272)
T ss_dssp             TTCCEEEECSSSSS
T ss_pred             CCCCEEEECCCCCC
T ss_conf             59977985278883


No 3  
>d2q07a2 c.18.1.4 (A:244-393) Uncharacterized protein AF0587 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=3.54  E-value=90  Score=12.83  Aligned_cols=10  Identities=40%  Similarity=0.959  Sum_probs=4.8

Q ss_pred             HHHHCCCCCC
Q ss_conf             5631136336
Q gi|254780951|r   17 LLFSCSSKKG   26 (49)
Q Consensus        17 llfscsskkg   26 (49)
                      +|+-||.+|-
T Consensus        19 vllPCSa~KP   28 (150)
T d2q07a2          19 LLLPCTARKP   28 (150)
T ss_dssp             EEEECCSSSS
T ss_pred             EEEECCCCCC
T ss_conf             9953666788


No 4  
>d1dsqa_ g.40.1.1 (A:) Nucleic acid binding protein p14 {Mouse mammary tumor virus [TaxId: 11757]}
Probab=2.47  E-value=1.4e+02  Score=11.83  Aligned_cols=15  Identities=47%  Similarity=0.913  Sum_probs=8.4

Q ss_pred             HHHHHHCCCCCCCHHH
Q ss_conf             1356311363362111
Q gi|254780951|r   15 SPLLFSCSSKKGGEKK   30 (49)
Q Consensus        15 spllfscsskkggekk   30 (49)
                      .|.-|||. |.|--++
T Consensus         2 gpvcfscg-ktghikk   16 (26)
T d1dsqa_           2 GPVCFSCG-KTGHIKR   16 (26)
T ss_dssp             CCBCTTTC-CBSSCTT
T ss_pred             CCEEEECC-CCCCCHH
T ss_conf             98777568-7665113


No 5  
>d1d0da_ g.8.1.2 (A:) Anticoagulant protein, factor Xa inhibitor {Soft tick (Ornithodoros moubata) [TaxId: 6938]}
Probab=1.46  E-value=3.2e+02  Score=10.17  Aligned_cols=17  Identities=41%  Similarity=0.892  Sum_probs=10.9

Q ss_pred             HHHHHHH--HCCCCCCCHH
Q ss_conf             7613563--1136336211
Q gi|254780951|r   13 AISPLLF--SCSSKKGGEK   29 (49)
Q Consensus        13 aispllf--scsskkggek   29 (49)
                      .|.|--|  .|++..||++
T Consensus         5 cikp~d~~~~c~~~e~~~~   23 (60)
T d1d0da_           5 CIKPRDWIDECDSNEGGER   23 (60)
T ss_dssp             GSCCTTCCCCCCGGGTCEE
T ss_pred             CCCHHHHHHHCCCCCCCEE
T ss_conf             2383776754457778437


No 6  
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.46  E-value=2.4e+02  Score=10.75  Aligned_cols=14  Identities=50%  Similarity=0.880  Sum_probs=9.8

Q ss_pred             HHHHHHHCCCCCCC
Q ss_conf             61356311363362
Q gi|254780951|r   14 ISPLLFSCSSKKGG   27 (49)
Q Consensus        14 ispllfscsskkgg   27 (49)
                      -.|-||.|+..+|.
T Consensus        10 ~~prLf~~~~~~g~   23 (113)
T d2fh1a3          10 HPPRLFACSNKIGR   23 (113)
T ss_dssp             CCCEEEEEECTTSS
T ss_pred             CCCEEEEEECCCCC
T ss_conf             89879999869998


No 7  
>d1ecib_ a.33.1.1 (B:) Ectatomin subunit B, EB {Ant (Ectatomma tuberculatum), venom [TaxId: 39300]}
Probab=1.25  E-value=3.7e+02  Score=9.87  Aligned_cols=20  Identities=40%  Similarity=0.507  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHHCCCCCCC
Q ss_conf             89999761356311363362
Q gi|254780951|r    8 TVLMLAISPLLFSCSSKKGG   27 (49)
Q Consensus         8 tvlmlaispllfscsskkgg   27 (49)
                      |+.-|.|.|-|-|-..|-.|
T Consensus         3 tivklticptlksmakkceg   22 (34)
T d1ecib_           3 TIVKLTICPTLKSMAKKCEG   22 (34)
T ss_dssp             SHHHHHHHHHHHHHHTTBST
T ss_pred             CEEEEEECCHHHHHHHHCCC
T ss_conf             04788756008999987121


No 8  
>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=1.20  E-value=3.3e+02  Score=10.11  Aligned_cols=11  Identities=36%  Similarity=0.797  Sum_probs=0.0

Q ss_pred             HHHHHCCCCCC
Q ss_conf             35631136336
Q gi|254780951|r   16 PLLFSCSSKKG   26 (49)
Q Consensus        16 pllfscsskkg   26 (49)
                      |+||.|..-|+
T Consensus        94 pvlvHC~~Gkd  104 (151)
T d1xria_          94 PVLIHCKRGKH  104 (151)
T ss_dssp             SEEEECSSSSS
T ss_pred             CEEEECCCCCH
T ss_conf             77877489840


No 9  
>d1oysa1 d.14.1.4 (A:1-151) Ribonuclease PH, domain 1 {Bacillus subtilis [TaxId: 1423]}
Probab=1.12  E-value=4.2e+02  Score=9.61  Aligned_cols=15  Identities=27%  Similarity=0.370  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHCCCC
Q ss_conf             999761356311363
Q gi|254780951|r   10 LMLAISPLLFSCSSK   24 (49)
Q Consensus        10 lmlaispllfscssk   24 (49)
                      ||-|+.+|..+|+-|
T Consensus       137 L~dA~~~~~~~~~i~  151 (151)
T d1oysa1         137 MAIAIGKLIKAGTIK  151 (151)
T ss_dssp             HHHHHHHHHHTTSSS
T ss_pred             HHHHHHHHHHCCCCC
T ss_conf             999988898747859


No 10 
>d1avgi_ b.60.1.3 (I:) Thrombin inhibitor {Triatomine bug (Triatoma pallidipennis) [TaxId: 30077]}
Probab=1.09  E-value=3e+02  Score=10.30  Aligned_cols=15  Identities=13%  Similarity=0.109  Sum_probs=0.0

Q ss_pred             HHHHCCCCCCCHHHC
Q ss_conf             563113633621112
Q gi|254780951|r   17 LLFSCSSKKGGEKKG   31 (49)
Q Consensus        17 llfscsskkggekkg   31 (49)
                      |++||..+.++.+..
T Consensus       108 lVysC~~~~~~~~~d  122 (142)
T d1avgi_         108 LVCRSITFTSQPKED  122 (142)
T ss_dssp             EEEEEEEESSSCCCE
T ss_pred             EEEEEECCCCCCCCC
T ss_conf             999983159983332


Done!