RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= gi|254780951|ref|YP_003065364.1| hypothetical protein CLIBASIA_04250 [Candidatus Liberibacter asiaticus str. psy62] (49 letters) >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Score = 28.0 bits (61), Expect = 0.54 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 1/14 (7%) Query: 28 EKKGAEKKTSAPLK 41 EK+ A KK A LK Sbjct: 18 EKQ-ALKKLQASLK 30 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.311 0.127 0.343 Gapped Lambda K H 0.267 0.0427 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 346,176 Number of extensions: 8525 Number of successful extensions: 11 Number of sequences better than 10.0: 1 Number of HSP's gapped: 11 Number of HSP's successfully gapped: 1 Length of query: 49 Length of database: 5,693,230 Length adjustment: 22 Effective length of query: 27 Effective length of database: 5,159,862 Effective search space: 139316274 Effective search space used: 139316274 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 50 (23.8 bits)