HHsearch alignment for GI: 254780952 and conserved domain: COG1112
>COG1112 Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair].
Probab=92.58 E-value=0.042 Score=33.20 Aligned_cols=58 Identities=26% Similarity=0.271 Sum_probs=39.0
Q ss_pred CCEEEEEECCCCCCCCCEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEEC
Q ss_conf 936999611345566983698468576684221299678789999999998586411699831
Q gi|254780952|r 569 NCIQIMTLHAAKGLEFDTVFISGWEQGLLPHQLSINEGNVEGERRLAYVGITRAKKKCHLFYT 631 (685)
Q Consensus 569 d~V~i~TIH~SKGLEfd~V~i~gl~~g~~P~~~~~~~~~~eEErRL~YVA~TRAk~~L~l~~~ 631 (685)
T Consensus 670 ~~v~v~tVd~fQG~EkdvIi~S~v~s~-~~~---~~i~~l~d~rRL-NVAlTRAk~~livvg~ 727 (767)
T COG1112 670 KGVEVGTVDGFQGREKDVIILSLVRSN-DDK---GEIGFLGDPRRL-NVALTRAKRKLIVVGS 727 (767)
T ss_pred CCCEECCCCCCCCCCCCEEEEEEEECC-CCC---CCCCCCCCCCCE-EEHHHHCCCCEEEEEC
T ss_conf 672578876617986657999865417-877---753213687521-1464440264599966