HHsearch alignment for GI: 254780952 and conserved domain: COG1204

>COG1204 Superfamily II helicase [General function prediction only].

Probab=96.82  E-value=0.0052  Score=39.40  Aligned_cols=65  Identities=23%  Similarity=0.271  Sum_probs=50.1

Q ss_pred             CCCHHHHHHHHCC--CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHHH
Q ss_conf             2998899998538--9896699958898835899999999998089997886762114799999999999
Q gi|254780952|r   29 GLNAQQTHAVTIP--DDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLA   96 (685)
Q Consensus        29 ~Ln~~Q~~av~~~--~~~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~el~~Ri~   96 (685)
T Consensus        31 el~~~qq~av~~~~~~~~N~li~aPTgsGKTlIA~lai~~~l~~~---~~k~vYivPlkALa~Ek~~~~~   97 (766)
T COG1204          31 ELFNPQQEAVEKGLLSDENVLISAPTGSGKTLIALLAILSTLLEG---GGKVVYIVPLKALAEEKYEEFS   97 (766)
T ss_pred             HHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHC---CCCEEEEECHHHHHHHHHHHHH
T ss_conf             755789987411125798679976788866999999999999855---9838999075999999999866