HHsearch alignment for GI: 254780952 and conserved domain: PRK04837

>PRK04837 ATP-dependent RNA helicase RhlB; Provisional.
Probab=96.19  E-value=0.044  Score=33.03  Aligned_cols=80  Identities=20%  Similarity=0.209  Sum_probs=48.7

Q ss_pred             CCCCHHHHHHC-----CCHHHHHHHHCC-CCCCEEEEECCCCCHHHHHHHHH-HHHHHCCCCC-----HHHEEEEEECHH
Q ss_conf             83215888762-----998899998538-98966999588988358999999-9999808999-----788676211479
Q gi|254780952|r   19 VPSCVPNYLKG-----LNAQQTHAVTIP-DDTPLLILAGAGTGKTTVLIARM-LHLICHKEIP-----PSKILAMTFTNQ   86 (685)
Q Consensus        19 ~~~~~~~~l~~-----Ln~~Q~~av~~~-~~~~~lV~AgaGsGKT~~L~~ri-~~Ll~~~~~~-----p~~Il~iTFT~~   86 (685)
T Consensus        16 L~~~ll~~L~~~g~~~pTpIQ~~aIP~il~G~Dvi~~A~TGSGKTlAfllPil~~ll~~~~~~~~~~~~p~aLIL~PTRE   95 (423)
T PRK04837         16 LHPKVVEALEKKGFEYCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTATFHHLLSHPAPEGRKVNQPRALIMAPTRE   95 (423)
T ss_pred             CCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHH
T ss_conf             69999999997799999999999999996799889989998749999999999999837453345567861899938899


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999985
Q gi|254780952|r   87 AIQEMKNRLACY   98 (685)
Q Consensus        87 AA~el~~Ri~~~   98 (685)
T Consensus        96 La~Qi~~~~~~l  107 (423)
T PRK04837         96 LAVQIHADAEPL  107 (423)
T ss_pred             HHHHHHHHHHHH
T ss_conf             999999999997