HHsearch alignment for GI: 254780952 and conserved domain: PRK05298

>PRK05298 excinuclease ABC subunit B; Provisional.
Probab=94.23  E-value=0.31  Score=27.26  Aligned_cols=56  Identities=13%  Similarity=0.243  Sum_probs=37.7

Q ss_pred             CCEEEEECCCCCHHCCCCCHHHHHHHHHCCCCCHHHHEECCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             74488731553100000000136665311365303111010014788998752023320320
Q gi|254780952|r  342 AKVSIHVSQSDNSELSTIIQEIINIQNTGMSLNNIAILVRTSWQTRKFEDAFLEQEIPHKVI  403 (685)
Q Consensus       342 ~~v~~~~~~~~~~Ea~~Ia~~I~~l~~~g~~~~diAVL~Rtn~~~~~l~~~L~~~gIP~~~~  403 (685)
T Consensus       421 P~ievrp~~~---Qiddl~~ei~~~~~~~er---~LvttlTkkmaEdLt~yl~~~~ik~~Yl  476 (657)
T PRK05298        421 PEIEVRPTKG---QVDDLLSEIRKRVAKGER---VLVTTLTKRMAEDLTDYLKELGIKVRYL  476 (657)
T ss_pred             CCEEEECCCC---CHHHHHHHHHHHHHCCCE---EEEEECHHHHHHHHHHHHHHCCCEEEEE
T ss_conf             8459964878---799999999999636976---9999545989999999999679807996