HHsearch alignment for GI: 254780952 and conserved domain: PRK08084

>PRK08084 DNA replication initiation factor; Provisional.
Probab=94.17  E-value=0.27  Score=27.63  Aligned_cols=60  Identities=15%  Similarity=0.256  Sum_probs=32.3

Q ss_pred             CCCCCCHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEEC
Q ss_conf             36832158887629988999985389896699958898835899999999998089997886762114
Q gi|254780952|r   17 DFVPSCVPNYLKGLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFT   84 (685)
Q Consensus        17 ~~~~~~~~~~l~~Ln~~Q~~av~~~~~~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT   84 (685)
T Consensus        23 nFi~g~n~~~~~al---~-~~~~~~~~~~l~l~G~~G~GKTHLLqA-~~~~~~~~~---~~~~yl~~~   82 (235)
T PRK08084         23 SFYPGDNDSLLAAL---Q-NVLRQEHSGYIYLWGREGAGRSHLLHA-ACAELSQRG---DAVGYVPLD   82 (235)
T ss_pred             CCCCCCCHHHHHHH---H-HHHHCCCCCEEEEECCCCCCHHHHHHH-HHHHHHCCC---CCEEEEEHH
T ss_conf             23448869999999---9-998578987699989999888999999-999997079---857998779