HHsearch alignment for GI: 254780952 and conserved domain: PRK10875
>PRK10875 recD exonuclease V subunit alpha; Provisional.
Probab=99.80 E-value=3e-18 Score=144.05 Aligned_cols=81 Identities=22% Similarity=0.184 Sum_probs=55.5
Q ss_pred CCCCCHHHHHHCC------CHHHHHHHHCCCCCC-EEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHH
Q ss_conf 6832158887629------988999985389896-699958898835899999999998089997886762114799999
Q gi|254780952|r 18 FVPSCVPNYLKGL------NAQQTHAVTIPDDTP-LLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQE 90 (685)
Q Consensus 18 ~~~~~~~~~l~~L------n~~Q~~av~~~~~~~-~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~e 90 (685)
T Consensus 130 ~~~~~~~~~L~~lf~~~~~~dwQk~A~a~Al~~~~~vIsGGPGTGKTttV~~lLa~l~~~~~~~~l~I~LaAPTGKAAaR 209 (607)
T PRK10875 130 VDEALLAQTLDALFPPGDEVNWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQLADGERCRIRLAAPTGKAAAR 209 (607)
T ss_pred CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH
T ss_conf 99899999999857998885189999999875577899679998778899999999999645899708998822899999
Q ss_pred HHHHHHHH
Q ss_conf 99999985
Q gi|254780952|r 91 MKNRLACY 98 (685)
Q Consensus 91 l~~Ri~~~ 98 (685)
T Consensus 210 L~Esi~~~ 217 (607)
T PRK10875 210 LTESLGKA 217 (607)
T ss_pred HHHHHHHH
T ss_conf 99999878