HHsearch alignment for GI: 254780952 and conserved domain: PRK10919

>PRK10919 ATP-dependent DNA helicase Rep; Provisional.
Probab=100.00  E-value=0  Score=1069.90  Aligned_cols=615  Identities=35%  Similarity=0.535  Sum_probs=529.9

Q ss_pred             CCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHHHHHCCCC---CCE
Q ss_conf             29988999985389896699958898835899999999998089997886762114799999999999851645---878
Q gi|254780952|r   29 GLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLACYLGEK---IPR  105 (685)
Q Consensus        29 ~Ln~~Q~~av~~~~~~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~el~~Ri~~~l~~~---~~~  105 (685)
T Consensus         2 ~Ln~~Q~~AV~-~~~gp~lVlAGaGSGKT~tLt~Ria~Li~~~~v~P~~ILalTFT~kAA~Emk~Rl~~~lg~~~~~~~~   80 (672)
T PRK10919          2 RLNPGQQQAVE-FVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTLGRKEARGLM   80 (672)
T ss_pred             CCCHHHHHHHC-CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCE
T ss_conf             99989999983-99999899973855879999999999986689893338544217999999999999771832137867


Q ss_pred             EEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCH
Q ss_conf             96178999999998499848798980728999999999999973998547898999999866754158964612114653
Q gi|254780952|r  106 IQTFHSFCASILRKHGEVVGLPTDFAILDSAESRTIIKQLLKDLQIDDKDYDPHEVIEKIDYWQNRGWNPKDIPQSSLTE  185 (685)
Q Consensus       106 i~T~Hsf~~~il~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~k~~~~~~~~~~~~~~~~  185 (685)
T Consensus        81 i~TFHS~~~~iLr~~~~~lg~~~~f~i~d~~d~~~~~k~~~~~~~~-~~~~~~~~~~~~i~~~k~~~~~~~~~~~~~~~~  159 (672)
T PRK10919         81 ISTFHTLGLDIIKREYAALGMKSNFSLFDDTDQLALLKELTEGLIE-DDKVLLQQLISTISNWKNDLKTPAQAAAGAKGE  159 (672)
T ss_pred             EECHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCH
T ss_conf             8848999999999989982899998361699999999999987320-234789999999999987179999998761050


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC-CHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             899999999975577775300111000124543012-0688974012210253210775113468878775111126788
Q gi|254780952|r  186 DAEIPKAIYIQYVAYLQKTKSCDFGGLIIKTIEVLH-HPHVLKKYHEKIPYIMVDEYQDINTPQYLLLRLLCQKEDSKQG  264 (685)
Q Consensus       186 ~~~~~~~iy~~Y~~~l~~~~~lDf~Dll~~a~~ll~-~~~v~~~~~~r~~~ilVDEfQDtn~~Q~~ll~~L~~~~~~~~~  264 (685)
T Consensus       160 ~~~~~~~~y~~Y~~~l~~~~~~DFdDll~~~~~ll~~~~~v~~~~~~r~~~IlVDEfQDtn~~Q~~ll~~L~~~-----~  234 (672)
T PRK10919        160 RDRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQDTNTSQYELVKLLVGS-----R  234 (672)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCEEEEEECHHCCCHHHHHHHHHHHCC-----C
T ss_conf             77999999999999999869988799999999998528999999997540897622404999999999997279-----9


Q ss_pred             CEEEEEECHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCE
Q ss_conf             75999953068863113322013455420576640678761267514678752024443432010122221023556744
Q gi|254780952|r  265 ARICCVGDENQCIYEWRGAQFSHILNFQKDFKDANIIKLEQNYRSTTHILNTANKLISHNKQRFDKKLFTQRDCHDDAKV  344 (685)
Q Consensus       265 ~~l~vVGD~dQsIY~fRGA~~~~~~~f~~~f~~~~~i~L~~NyRS~~~Ii~~an~li~~n~~r~~k~l~~~~~~~~~~~v  344 (685)
T Consensus       235 ~~l~vVGD~dQSIY~FRGA~~~~i~~f~~~f~~~~~i~L~~NyRS~~~Il~~an~li~~n~~~~~k~l~~~~~~--g~~~  312 (672)
T PRK10919        235 ARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQNYRSSGRILKAANILIANNPHVFEKRLFSELGY--GDEL  312 (672)
T ss_pred             CCEEEECCCCCEEEHHHCCCHHHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCC--CCCE
T ss_conf             84777379662300750677689999887566774998423249977899999998761832111001332278--9861


Q ss_pred             EEEECCCCCHHCCCCCHHHHH-HHHHCCCCCHHHHEECCCHHHHHHHHHHHCCCCCEEEECC-CCCCCCCCHHHHHHHHH
Q ss_conf             887315531000000001366-6531136530311101001478899875202332032033-10001121028999998
Q gi|254780952|r  345 SIHVSQSDNSELSTIIQEIIN-IQNTGMSLNNIAILVRTSWQTRKFEDAFLEQEIPHKVIGG-SFYDRQEIRDALAYFRL  422 (685)
Q Consensus       345 ~~~~~~~~~~Ea~~Ia~~I~~-l~~~g~~~~diAVL~Rtn~~~~~l~~~L~~~gIP~~~~g~-~~f~~~eV~~lla~Lr~  422 (685)
T Consensus       313 ~~~~~~~~~~Ea~~i~~~ii~~~~~~~~~~~diAIL~R~n~~~~~le~~L~~~~IPy~i~g~~~f~~r~eikdlla~Lr~  392 (672)
T PRK10919        313 KVLSANNEEHEAERVTGELIAHHFVNKTQYKDYAILYRGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRV  392 (672)
T ss_pred             EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCHHCCHHHHHHHHHHHH
T ss_conf             79835987999999999999998734888355799954503226899999977998799578323127999999999998


Q ss_pred             HHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             84663024575304687546502466888878877398468999764104679977854334343335666531024660
Q gi|254780952|r  423 VCQEHRDEDFKRIINCPKRGIGKESLHKIQYHASQHHISLLQASEKLIDSGQFRPQIRQSLQNFVKDIRRWNNCSKKMDP  502 (685)
Q Consensus       423 i~~p~d~~a~~~il~~p~~gi~~~~l~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~  502 (685)
T Consensus       393 l~np~d~~~~~ril~~p~~~i~~~~l~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~~~-~  471 (672)
T PRK10919        393 LTNPDDDSAFLRIVNTPKREIGPATLQKLGEWAMTRNKSLFTASFDMGLSQTLTGRGYESLTRFTHWLAEIQRLAERE-P  471 (672)
T ss_pred             HCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC-C
T ss_conf             749872489999970730147999999999999863766899998754300026778999999999999999986248-3


Q ss_pred             HHHHHHHHHHCCCHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHC---------CCHHHHHHHHHHHHHHH--HCCCCCCC
Q ss_conf             2223334777096678850-688455898884399999998302---------68899999757654221--11545893
Q gi|254780952|r  503 APIANMILEQSGYMAMWKN-NKSSEKSQERLDNLRELLSIIEKH---------ETLEGFVLQAPLRENLG--SFIPDSNC  570 (685)
Q Consensus       503 ~~l~~~i~~~~~~~~~~~~-~~~~~~~~~~l~~l~~l~~~~~~~---------~sl~~fl~~~~~~~~~~--~~~~~~d~  570 (685)
T Consensus       472 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~r~~n~~~l~~~~~e~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~  551 (672)
T PRK10919        472 VAAVRDLIHGIDYESWLYETSPSPKAAEMRMKNVNQLFSWMTEMLEGSELDEPMTLTQVVTRFTLRDMMERGESEEELDQ  551 (672)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE
T ss_conf             78999999986388899873678402899999999999999999734554652209999999887766643765678990


Q ss_pred             EEEEEECCCCCCCCCEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             69996113455669836984685766842212996787899999999985864116998313211257654333555688
Q gi|254780952|r  571 IQIMTLHAAKGLEFDTVFISGWEQGLLPHQLSINEGNVEGERRLAYVGITRAKKKCHLFYTINRRTHDFTRVERYQPSQV  650 (685)
Q Consensus       571 V~i~TIH~SKGLEfd~V~i~gl~~g~~P~~~~~~~~~~eEErRL~YVA~TRAk~~L~l~~~~~~~~~~~~~~~~~~~~~~  650 (685)
T Consensus       552 V~LmTiH~SKGLEf~~Vfl~gl~eg~~P~~~~~~~~~~eEERRLfYVa~TRAk~~L~ls~~~~r~~~g~-----~~~~~p  626 (672)
T PRK10919        552 VQLMTLHASKGLEFPYVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGITRAQKELTFTLCKERRQYGE-----LVRPEP  626 (672)
T ss_pred             EEEEEHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHCCC-----CCCCCC
T ss_conf             899648862310368799967838999876569986087999999999999877665500452343887-----758999


Q ss_pred             CCHHHHCC
Q ss_conf             87233147
Q gi|254780952|r  651 SQFLLELY  658 (685)
Q Consensus       651 SrFl~El~  658 (685)
T Consensus       627 SrFl~eip  634 (672)
T PRK10919        627 SRFLLELP  634 (672)
T ss_pred             CCCHHHCC
T ss_conf             94621378