HHsearch alignment for GI: 254780952 and conserved domain: PRK11131

>PRK11131 ATP-dependent RNA helicase HrpA; Provisional.
Probab=95.89  E-value=0.036  Score=33.63  Aligned_cols=64  Identities=27%  Similarity=0.223  Sum_probs=42.1

Q ss_pred             HHHHHHHCCCCCCEEEEEC-CCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHHHHHCCCC
Q ss_conf             8999985389896699958-898835899999999998089997886762114799999999999851645
Q gi|254780952|r   33 QQTHAVTIPDDTPLLILAG-AGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLACYLGEK  102 (685)
Q Consensus        33 ~Q~~av~~~~~~~~lV~Ag-aGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~el~~Ri~~~l~~~  102 (685)
T Consensus        81 ~i~~~i~---~nqVvii~GeTGsGKTTQiPq---~~le~g~g~~~~I~~TQPRRiAA~svA~RVA~E~~~~  145 (1295)
T PRK11131         81 DILEAIR---DHQVVIVAGETGSGKTTQLPK---ICLELGRGIKGLIGHTQPRRLAARTVANRIAEELETE  145 (1295)
T ss_pred             HHHHHHH---HCCEEEEECCCCCCHHHHHHH---HHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCC
T ss_conf             9999999---799699976899987889999---9996279999989977965999999999999981999