HHsearch alignment for GI: 254780952 and conserved domain: PRK13104
>PRK13104 secA preprotein translocase subunit SecA; Reviewed.
Probab=95.50 E-value=0.13 Score=29.75 Aligned_cols=103 Identities=21% Similarity=0.176 Sum_probs=58.2
Q ss_pred HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHH----HHHHHHHHHHCCCCC----
Q ss_conf 889999853898966999588988358999999999980899978867621147999----999999998516458----
Q gi|254780952|r 32 AQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAI----QEMKNRLACYLGEKI---- 103 (685)
Q Consensus 32 ~~Q~~av~~~~~~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA----~el~~Ri~~~l~~~~---- 103 (685)
T Consensus 85 dvQl~gg~~lh~g~-iaEM~TGEGKTL~atl-p~yln---al~g~gvhvvTvNdYLA~RDae~m-~~~y~~lGltvg~i~ 158 (896)
T PRK13104 85 DVQLIGGMVLHEGN-IAEMRTGEGKTLVATL-PAYLN---AISGRGVHIVTVNDYLAKRDSQWM-KPIYEFLGLTVGVIY 158 (896)
T ss_pred HHHHHHHHHHHCCC-EEEECCCCCHHHHHHH-HHHHH---HHCCCCEEEECCCHHHHHHHHHHH-HHHHHHHCCEEEEEC
T ss_conf 79999899984585-1465178855999999-99998---755997199726535446449999-999998197673418
Q ss_pred ---------------CEEEEHHHHHHHHHHHHH-----HHCCCCCCCCCCCHHHHHH
Q ss_conf ---------------789617899999999849-----9848798980728999999
Q gi|254780952|r 104 ---------------PRIQTFHSFCASILRKHG-----EVVGLPTDFAILDSAESRT 140 (685)
Q Consensus 104 ---------------~~i~T~Hsf~~~il~~~~-----~~~g~~~~~~i~~~~~~~~ 140 (685)
T Consensus 159 ~~~~~~~r~~aY~~DitY~Tn~e~gFDyLrDnm~~~~~~~vqr~~~~aivDEvDSiL 215 (896)
T PRK13104 159 PDMSHKEKQEAYKADIVYGTNNEYGFDYLRDNMAFSLTDKVQRELNFAIVDEVDSIL 215 (896)
T ss_pred CCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCHHCCHHHHCCCCCCEEEEECHHHHH
T ss_conf 999979999971499379678654152357211138476256677647874223543