HHsearch alignment for GI: 254780952 and conserved domain: PRK13341

Probab=94.97  E-value=0.084  Score=31.12  Aligned_cols=96  Identities=17%  Similarity=0.330  Sum_probs=49.9

Q ss_pred             CCCCCCCCCCCHHHHH--HCC---CHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHH
Q ss_conf             2321136832158887--629---98899998538989669995889883589999999999808999788676211479
Q gi|254780952|r   12 HILKGDFVPSCVPNYL--KGL---NAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQ   86 (685)
Q Consensus        12 ~~~~~~~~~~~~~~~l--~~L---n~~Q~~av~~~~~~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~   86 (685)
T Consensus        16 aPLA~rmRP~~Lde~vGQ~hllg~g~~Lrr~i~~~~~~S~Il~GPPGtGKTT-----LA~iIA~~t--~~~F~~lsAv~s   88 (726)
T PRK13341         16 APLADRLRPRTLEEFVGQDHILGEGRLLRRAIKADRVGSLILYGPPGVGKTT-----LARIIANHT--RAHFSSLNAVLA   88 (726)
T ss_pred             CCCHHHHCCCCHHHHCCCHHHCCCCCHHHHHHHCCCCCEEEEECCCCCCHHH-----HHHHHHHHH--CCCEEEEECCCC
T ss_conf             9856862999877735957542898289999976999827888979999999-----999998874--886799856203


Q ss_pred             HHHHHHHHHHH---HC---CC-CCCEEEEHHHHHH
Q ss_conf             99999999998---51---64-5878961789999
Q gi|254780952|r   87 AIQEMKNRLAC---YL---GE-KIPRIQTFHSFCA  114 (685)
Q Consensus        87 AA~el~~Ri~~---~l---~~-~~~~i~T~Hsf~~  114 (685)
T Consensus        89 gvkdlr~ii~~A~~~~~~~g~~tILFIDEIHRfNK  123 (726)
T PRK13341         89 GVKDLRAEVDAAKERLERHGKRTILFIDEVHRFNK  123 (726)
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCH
T ss_conf             77999999999999987459965999862542588