HHsearch alignment for GI: 254780952 and conserved domain: PRK13766

>PRK13766 Hef nuclease; Provisional.
Probab=96.63  E-value=0.0076  Score=38.30  Aligned_cols=69  Identities=14%  Similarity=0.153  Sum_probs=51.9

Q ss_pred             CCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHHHHHCC
Q ss_conf             299889999853898966999588988358999999999980899978867621147999999999998516
Q gi|254780952|r   29 GLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLACYLG  100 (685)
Q Consensus        29 ~Ln~~Q~~av~~~~~~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~el~~Ri~~~l~  100 (685)
T Consensus        15 e~R~YQ~el~~~Al~~NtiVvLPTG~GKT~IA~lvi~~~l~~---~~gKilFLaPT~pLV~Qq~~~~~~~l~   83 (764)
T PRK13766         15 EARLYQQLLAAKALKGNTLVVLPTGLGKTAIALLVIAERLQK---YGGKVLILAPTKPLVEQHAEFFRKFLN   83 (764)
T ss_pred             CCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHH---CCCEEEEECCCHHHHHHHHHHHHHHCC
T ss_conf             653879999999985898999599866899999999999974---898899985888899999999999709