HHsearch alignment for GI: 254780952 and conserved domain: PRK13766
>PRK13766 Hef nuclease; Provisional.
Probab=96.63 E-value=0.0076 Score=38.30 Aligned_cols=69 Identities=14% Similarity=0.153 Sum_probs=51.9
Q ss_pred CCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHHHHHCC
Q ss_conf 299889999853898966999588988358999999999980899978867621147999999999998516
Q gi|254780952|r 29 GLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLACYLG 100 (685)
Q Consensus 29 ~Ln~~Q~~av~~~~~~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~el~~Ri~~~l~ 100 (685)
T Consensus 15 e~R~YQ~el~~~Al~~NtiVvLPTG~GKT~IA~lvi~~~l~~---~~gKilFLaPT~pLV~Qq~~~~~~~l~ 83 (764)
T PRK13766 15 EARLYQQLLAAKALKGNTLVVLPTGLGKTAIALLVIAERLQK---YGGKVLILAPTKPLVEQHAEFFRKFLN 83 (764)
T ss_pred CCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHH---CCCEEEEECCCHHHHHHHHHHHHHHCC
T ss_conf 653879999999985898999599866899999999999974---898899985888899999999999709