HHsearch alignment for GI: 254780952 and conserved domain: PRK13826

>PRK13826 Dtr system oriT relaxase; Provisional.
Probab=97.00  E-value=0.00033  Score=47.63  Aligned_cols=44  Identities=27%  Similarity=0.526  Sum_probs=26.3

Q ss_pred             EEECCCCCCCCCEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEECC
Q ss_conf             96113455669836984685766842212996787899999999985864116998313
Q gi|254780952|r  574 MTLHAAKGLEFDTVFISGWEQGLLPHQLSINEGNVEGERRLAYVGITRAKKKCHLFYTI  632 (685)
Q Consensus       574 ~TIH~SKGLEfd~V~i~gl~~g~~P~~~~~~~~~~eEErRL~YVA~TRAk~~L~l~~~~  632 (685)
T Consensus       696 ~TIHKsQG~TVDr~~VLa--s~---~---m-------DrhltYVAMTRHRe~~~Ly~~~  739 (1102)
T PRK13826        696 TTIHKSQGATVDRVKVLA--SL---S---L-------DRHLTYVAMTRHREDLAVYYGR  739 (1102)
T ss_pred             HHHHHHCCCCCCEEEEEC--CC---C---C-------CHHHHHHHHCCCCCCCEEEEEH
T ss_conf             454750486203389936--78---8---5-------3336364420040213112206