HHsearch alignment for GI: 254780952 and conserved domain: PRK13826
>PRK13826 Dtr system oriT relaxase; Provisional.
Probab=97.00 E-value=0.00033 Score=47.63 Aligned_cols=44 Identities=27% Similarity=0.526 Sum_probs=26.3
Q ss_pred EEECCCCCCCCCEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEECC
Q ss_conf 96113455669836984685766842212996787899999999985864116998313
Q gi|254780952|r 574 MTLHAAKGLEFDTVFISGWEQGLLPHQLSINEGNVEGERRLAYVGITRAKKKCHLFYTI 632 (685)
Q Consensus 574 ~TIH~SKGLEfd~V~i~gl~~g~~P~~~~~~~~~~eEErRL~YVA~TRAk~~L~l~~~~ 632 (685)
T Consensus 696 ~TIHKsQG~TVDr~~VLa--s~---~---m-------DrhltYVAMTRHRe~~~Ly~~~ 739 (1102)
T PRK13826 696 TTIHKSQGATVDRVKVLA--SL---S---L-------DRHLTYVAMTRHREDLAVYYGR 739 (1102)
T ss_pred HHHHHHCCCCCCEEEEEC--CC---C---C-------CHHHHHHHHCCCCCCCEEEEEH
T ss_conf 454750486203389936--78---8---5-------3336364420040213112206