HHsearch alignment for GI: 254780952 and conserved domain: TIGR03453
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=90.49 E-value=0.33 Score=27.08 Aligned_cols=41 Identities=29% Similarity=0.326 Sum_probs=25.0
Q ss_pred CCCEEEEECC----CCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHH
Q ss_conf 8966999588----98835899999999998089997886762114799
Q gi|254780952|r 43 DTPLLILAGA----GTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQA 87 (685)
Q Consensus 43 ~~~~lV~Aga----GsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~A 87 (685)
T Consensus 101 g~~~~VIav~N~KGGVGKTTtav~LA~~LA~~-G---~RVLvIDLDPQa 145 (387)
T TIGR03453 101 GEHLQVIAVTNFKGGSGKTTTSAHLAQYLALR-G---YRVLAIDLDPQA 145 (387)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC-C---CCEEEEECCCHH
T ss_conf 99880899978887656999999999999977-9---988999537016