HHsearch alignment for GI: 254780952 and conserved domain: cd00046

>cd00046 DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

Probab=96.86  E-value=0.0032  Score=40.90  Aligned_cols=55  Identities=25%  Similarity=0.401  Sum_probs=43.9

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHHHHHCCC
Q ss_conf             669995889883589999999999808999788676211479999999999985164
Q gi|254780952|r   45 PLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLACYLGE  101 (685)
Q Consensus        45 ~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~el~~Ri~~~l~~  101 (685)
T Consensus         2 ~~lv~~ptGsGKT~~~~~~~~~~~~~~--~~~~~lil~Pt~~L~~q~~~~~~~~~~~   56 (144)
T cd00046           2 DVLLAAPTGSGKTLAALLPILELLDSL--KGGQVLVLAPTRELANQVAERLKELFGE   56 (144)
T ss_pred             CEEEECCCCCHHHHHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHHHHHHHCCC
T ss_conf             999988997179999999999999756--8976999746799999999999997488