HHsearch alignment for GI: 254780952 and conserved domain: cd01120
>cd01120 RecA-like_NTPases RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Probab=94.33 E-value=0.11 Score=30.31 Aligned_cols=46 Identities=26% Similarity=0.507 Sum_probs=30.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHHH
Q ss_conf 699958898835899999999998089997886762114799999999999
Q gi|254780952|r 46 LLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLA 96 (685)
Q Consensus 46 ~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~el~~Ri~ 96 (685)
T Consensus 2 ~li~g~~g~GKttl~~~~~~~~~~----~~~~~~~~~~ee-~~~q~~~~~~ 47 (165)
T cd01120 2 ILVFGPTGSGKTTLALQLALNIAT----KGGKVVYVDIEE-EIEELTERLI 47 (165)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH----CCCEEEEEECCC-CHHHHHHHHH
T ss_conf 899989999899999999999876----399799998666-4489999999