HHsearch alignment for GI: 254780952 and conserved domain: cd01122

>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.
Probab=95.72  E-value=0.024  Score=34.87  Aligned_cols=52  Identities=31%  Similarity=0.470  Sum_probs=34.4

Q ss_pred             CCCCEEEE-ECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHHHH
Q ss_conf             98966999-588988358999999999980899978867621147999999999998
Q gi|254780952|r   42 DDTPLLIL-AGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLAC   97 (685)
Q Consensus        42 ~~~~~lV~-AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~el~~Ri~~   97 (685)
T Consensus        28 ~~GeL~viaarpg~GKT~f~~~~a~~~~~~~g---~~vl~~Sl-Em~~~~~~~Rlls   80 (271)
T cd01122          28 RKGELIILTAGTGVGKTTFLREYALDLITQHG---VRVGTISL-EEPVVRTARRLLG   80 (271)
T ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC---CEEEEEEC-CCCHHHHHHHHHH
T ss_conf             99808999968998699999999999999769---90899970-4999999999999