HHsearch alignment for GI: 254780952 and conserved domain: pfam02534

>pfam02534 TraG TraG/TraD family. These proteins contain a P-loop and walker-B site for nucleotide binding. TraG is essential for DNA transfer in bacterial conjugation. These proteins are thought to mediate interactions between the DNA-processing (Dtr) and the mating pair formation (Mpf) systems.
Probab=91.02  E-value=0.085  Score=31.10  Aligned_cols=35  Identities=23%  Similarity=0.449  Sum_probs=24.7

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEE
Q ss_conf             89669995889883589999999999808999788676211
Q gi|254780952|r   43 DTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTF   83 (685)
Q Consensus        43 ~~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTF   83 (685)
T Consensus        44 ~~H~lviaptgsGKt~~~V--iPnLl~~----~~S~VV~Dp   78 (468)
T pfam02534        44 FSHVLVFAGTGSGKGVGVV--IPNLLVW----KGSIVVLDP   78 (468)
T ss_pred             CCEEEEECCCCCCCCCCCH--HHHHHHC----CCCEEEEEC
T ss_conf             7679998489997234242--9888518----997899948