HHsearch alignment for GI: 254780952 and conserved domain: pfam04851

>pfam04851 ResIII Type III restriction enzyme, res subunit.
Probab=97.35  E-value=0.0011  Score=44.04  Aligned_cols=63  Identities=19%  Similarity=0.242  Sum_probs=48.9

Q ss_pred             CCCHHHHHHHHCC-CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHH
Q ss_conf             2998899998538-989669995889883589999999999808999788676211479999999999
Q gi|254780952|r   29 GLNAQQTHAVTIP-DDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRL   95 (685)
Q Consensus        29 ~Ln~~Q~~av~~~-~~~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~el~~Ri   95 (685)
T Consensus         3 ~LR~yQ~~a~~~~~~~~~~~i~~pTGsGKT~~~~~~i~~~~~~----~~~~lvlvp~~~L~~Q~~~~~   66 (103)
T pfam04851         3 ELRPYQIEAIRNLLEKKRGLIVMATGSGKTLTAAKLIARLLKG----KKKVLFLVPRKDLLEQALEEF   66 (103)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHC----CCCEEEEECCHHHHHHHHHHH
T ss_conf             8729999999999963986999589998799999999999846----992999908299999999965