HHsearch alignment for GI: 254780952 and conserved domain: pfam04851
>pfam04851 ResIII Type III restriction enzyme, res subunit.
Probab=97.35 E-value=0.0011 Score=44.04 Aligned_cols=63 Identities=19% Similarity=0.242 Sum_probs=48.9
Q ss_pred CCCHHHHHHHHCC-CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHH
Q ss_conf 2998899998538-989669995889883589999999999808999788676211479999999999
Q gi|254780952|r 29 GLNAQQTHAVTIP-DDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRL 95 (685)
Q Consensus 29 ~Ln~~Q~~av~~~-~~~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~el~~Ri 95 (685)
T Consensus 3 ~LR~yQ~~a~~~~~~~~~~~i~~pTGsGKT~~~~~~i~~~~~~----~~~~lvlvp~~~L~~Q~~~~~ 66 (103)
T pfam04851 3 ELRPYQIEAIRNLLEKKRGLIVMATGSGKTLTAAKLIARLLKG----KKKVLFLVPRKDLLEQALEEF 66 (103)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHC----CCCEEEEECCHHHHHHHHHHH
T ss_conf 8729999999999963986999589998799999999999846----992999908299999999965