HHsearch alignment for GI: 254780953 and conserved domain: COG2885

>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane].
Probab=100.00  E-value=4.7e-37  Score=226.68  Aligned_cols=176  Identities=30%  Similarity=0.421  Sum_probs=128.4

Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCEECC-CHH
Q ss_conf             9999999975147887654444455554311110012337888999999720178358860875899852211128-813
Q gi|254780953|r    8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV   86 (190)
Q Consensus         8 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~-~~a   86 (190)
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~F~~ds~   92 (190)
T COG2885          14 AALPGAALGACASKLNGDSA-ALIGAGPGALGGAGAGVPLDVAEAELRAKEAGDGPAERRKARDIILNLPNDVLFDFDSS   92 (190)
T ss_pred             HHHHHHHHHCCHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHCCCCCEEEECCCCH
T ss_conf             10045542110100125653-22465544343345676655220012211003563212233320001454068358834


Q ss_pred             HCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
Q ss_conf             10999999999999999858994899998037787200111225899999999888523874516999970345888997
Q gi|254780953|r   87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN  166 (190)
Q Consensus        87 ~l~~~~~~~L~~ia~~l~~~~~~~i~I~GHTD~~g~~~~N~~LS~~RA~~V~~~L~~~g~~~~r~i~v~g~G~~~p~~~n  166 (190)
T Consensus        93 ~l~p~~~~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~~-i~~~G~G~~~Pia~n  171 (190)
T COG2885          93 VLKPKAQATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVADR-ISTVGYGEEKPIASN  171 (190)
T ss_pred             HHCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC-EEEEECCCCCCCCCC
T ss_conf             4398999999999999987899779997557887986787688899999999999984997011-789861645777889


Q ss_pred             CCHHHHHCCCCEEEEEECC
Q ss_conf             6977985299169999301
Q gi|254780953|r  167 DTKVGRQNNQRIEIQIFPR  185 (190)
Q Consensus       167 ~~~~~ra~NRRVei~i~~~  185 (190)
T Consensus       172 ~t~~gra~NRRVei~i~~~  190 (190)
T COG2885         172 ATEEGRAKNRRVEIKISPK  190 (190)
T ss_pred             CCCHHCCCCCCEEEEEECC
T ss_conf             7800103467478986278