HHsearch alignment for GI: 254780953 and conserved domain: TIGR02802
>TIGR02802 Pal_lipo peptidoglycan-associated lipoprotein; InterPro: IPR014169 Members in this entry represent the peptidoglycan-associated lipoprotein (Pal or OprL) protein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The entry represents only the conserved C-terminal domain..
Probab=100.00 E-value=7.2e-36 Score=220.08 Aligned_cols=102 Identities=28% Similarity=0.423 Sum_probs=98.1
Q ss_pred EEC-CCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
Q ss_conf 112-8813109999999999999998589948999980377872001112258999999998885238745169999703
Q gi|254780953|r 80 VSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158 (190)
Q Consensus 80 ~~f-~~~a~l~~~~~~~L~~ia~~l~~~~~~~i~I~GHTD~~g~~~~N~~LS~~RA~~V~~~L~~~g~~~~r~i~v~g~G 158 (190)
T Consensus 2 vyF~~D~~~l~~e~~~~l~~hA~~L~~~p~~~V~iEGH~DERGTrEYNlALGeRRA~AV~~yL~~~GV~~~q-~~~vSYG 80 (104)
T TIGR02802 2 VYFDFDSSDLKSEAQAILDAHAQYLKKNPSVRVTIEGHTDERGTREYNLALGERRANAVKDYLQAKGVSASQ-IETVSYG 80 (104)
T ss_pred EECCCCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC-EEEEECC
T ss_conf 432358143177999999998999986799378886307888887777778899999999999973896110-0463026
Q ss_pred CCCCCCCCCCHHHHHCCCCEEEEE
Q ss_conf 458889976977985299169999
Q gi|254780953|r 159 YKYPIDTNDTKVGRQNNQRIEIQI 182 (190)
Q Consensus 159 ~~~p~~~n~~~~~ra~NRRVei~i 182 (190)
T Consensus 81 kErP~~~G~~E~~wakNRR~~~vy 104 (104)
T TIGR02802 81 KERPAALGHDEAAWAKNRRAVLVY 104 (104)
T ss_pred CCCCCCCCCCHHHHHHCCCCCCCC
T ss_conf 656877898857775405310049