HHsearch alignment of GI: 254780953 and MMDB domain: 3khn_A_
>3khn_A (A:) MOTB protein, putative; structural genomics, OMPA-like domain, PSI-2, protein structure initiative; 2.03A {Desulfovibrio vulgaris str}
Probab=100.00 E-value=3.8e-32 Score=198.88 Aligned_cols=143 Identities=20% Similarity=0.256 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCEECC-CHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC---
Q ss_conf 37888999999720178358860875899852211128-81310999999999999999858994899998037787---
Q gi|254780953|r 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG--- 121 (190)
Q Consensus 46 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~-~~a~l~~~~~~~L~~ia~~l~~~~~~~i~I~GHTD~~g--- 121 (190)
..+.....+........+.+...++.+.+.++..++|+ +++.|+++++..|..++.+|+.+|...|.|+||||+.|
T Consensus 19 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~~~~F~~gs~~l~~~~~~~L~~ia~~l~~~~~~~i~I~GhtD~~g~~~ 98 (174)
T 3khn_A 19 TYNEXRTYFTVNGVEGVIGAVFDEGVITLRVPSEVLFAPGAVELAPGADRVLATLKDLFIRRREQNINIKGFTDDVQPSA 98 (174)
T ss_dssp HHHHHHHHHHHTTCTTTCEEEEETTEEEEEEEHHHHBCTTCCSBCTTHHHHHHHHHHHHHHTTTCEEEEEEECCSCCCCT
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC
T ss_conf 99999999986146775699983998999946873246997402988999999998754038742999974036766655
Q ss_pred --CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEEECCHHHC
Q ss_conf --20011122589999999988852387451699997034588899769779852991699993010113
Q gi|254780953|r 122 --TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189 (190)
Q Consensus 122 --~~~~N~~LS~~RA~~V~~~L~~~g~~~~r~i~v~g~G~~~p~~~n~~~~~ra~NRRVei~i~~~~~~k 189 (190)
++.+||.||++||.+|+.||...|+.+.| |.+.|||+++|+++|+++++|++||||||.|.++...+
T Consensus 99 ~~~~~~n~~LS~~RA~~V~~~l~~~gi~~~r-i~~~g~G~~~p~~~~~~~~~~~~NRRVei~i~~~~~~~ 167 (174)
T 3khn_A 99 NARFKDNWEVSALRSVNVLRYFLGAGIEPAR-LTATGLGELDPLFPNTSDENRARNRRVEFVLERRVVRE 167 (174)
T ss_dssp TSSCSSHHHHHHHHHHHHHHHHHHTTCCGGG-EEEEEEETSSCSSCSSSHHHHHHHSEEEEEEEC----C
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC-EEEEEEECCCCCCCCCCHHHHHHCCCEEEEEEECCCCC
T ss_conf 6643201368899999999999871478666-79998424577799939789987396899998545788