HHsearch alignment of GI: 254780953 and MMDB domain: 3ldt_A_
>3ldt_A (A:) Outer membrane protein, OMPA family protein; OMPA-like domain, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Legionella pneumophila}
Probab=100.00 E-value=1.4e-32 Score=201.29 Aligned_cols=137 Identities=28% Similarity=0.433 Sum_probs=127.2
Q ss_pred HHHHHHHHHCCCCCEEEEECCEEEEEECCCEECC-CHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH
Q ss_conf 8999999720178358860875899852211128-813109999999999999998589948999980377872001112
Q gi|254780953|r 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128 (190)
Q Consensus 50 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~-~~a~l~~~~~~~L~~ia~~l~~~~~~~i~I~GHTD~~g~~~~N~~ 128 (190)
....+.......++.+...+..+.+.++..++|. +++.|+++++..|+.++.+|+.+|+..|.|+||||..|+..|||.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~F~~~s~~l~~~~~~~L~~la~~l~~~p~~~i~I~Ghtd~~g~~~~n~~ 105 (169)
T 3ldt_A 26 SKRKIIRDLQKQDIQYVEYGDTRTLIIPTDKYFXFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSRSHKRK 105 (169)
T ss_dssp HHHHHHHHHHHTTCEEEEETTEEEEEEETTTCCC-CCHHHHHHHCHHHHHHHHHHTTCTTSCEEEEEECTTSCCC--CHH
T ss_pred HHHHHHHHHHCCCCEEEEECCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH
T ss_conf 99999999854995799969989999068825708963269889999999999999789957999997289897667577
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEEECCHH
Q ss_conf 25899999999888523874516999970345888997697798529916999930101
Q gi|254780953|r 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187 (190)
Q Consensus 129 LS~~RA~~V~~~L~~~g~~~~r~i~v~g~G~~~p~~~n~~~~~ra~NRRVei~i~~~~~ 187 (190)
||.+||.+|+.||+..|+.+.| |.+.|||+.+|+++|+++++|++||||||+|+++..
T Consensus 106 LS~~RA~aV~~~L~~~Gi~~~r-i~~~g~G~~~p~~~~~~~~~~~~NRRVei~i~~~~~ 163 (169)
T 3ldt_A 106 LSQAQAETXXTFLWANGIAAKR-LKAEGYGDKNAISDNAIIHGSAQNRRIEIQWFTSEG 163 (169)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTT-EEECCTTCTTSCCCTTTSCGGGGTSEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHCCCCHHH-EEEEEECCCCCCCCCCCHHHHHHCCCEEEEEEECCC
T ss_conf 9999999999999985999899-899997566767999297899854988999996898