HHsearch results for GI: 254780953 and protein with PDBid: 2k1s_A

>2k1s_A Inner membrane lipoprotein YIAD; abbababab, OMPA, alpha beta, palmitate, transmembrane, structural genomics, PSI-2; NMR {Escherichia coli K12}
Probab=100.00  E-value=9.7e-36  Score=218.14  Aligned_cols=141  Identities=33%  Similarity=0.502  Sum_probs=133.7

Q ss_pred             HHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCEECC-CHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHH
Q ss_conf             37888999999720178358860875899852211128-81310999999999999999858994899998037787200
Q gi|254780953|r   46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK  124 (190)
Q Consensus        46 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~-~~a~l~~~~~~~L~~ia~~l~~~~~~~i~I~GHTD~~g~~~  124 (190)
                      ++|..++.++..+...++.+...++.+.+.++..++|. +++.|+++++..|+.++..|+.+|+..|.|+||||..|+..
T Consensus         2 ~~d~~e~~Lr~~l~~~~v~v~~~~~~~~l~l~~~v~F~~~s~~L~~~~~~~L~~ia~~L~~~~~~~i~I~GhtD~~g~~~   81 (149)
T 2k1s_A            2 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHD   81 (149)
T ss_dssp             CSHHHHHHHHHHTTTTSCEEEEETTEEEEEEEHHHHBSSSSSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEECCCTTCHH
T ss_pred             CHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHH
T ss_conf             77899999999862599679997999999868740542997226988999999999999648995799998807868955


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEEECCHH
Q ss_conf             111225899999999888523874516999970345888997697798529916999930101
Q gi|254780953|r  125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN  187 (190)
Q Consensus       125 ~N~~LS~~RA~~V~~~L~~~g~~~~r~i~v~g~G~~~p~~~n~~~~~ra~NRRVei~i~~~~~  187 (190)
                      +||.||.+||.+|+.||+..|+.+.| +.+.|||+++|+++|+++++|++||||||.|+|.-+
T Consensus        82 ~N~~LS~~RA~~V~~~L~~~Gi~~~r-l~~~g~G~~~P~~~~~~~~~~~~NRRVei~i~P~~~  143 (149)
T 2k1s_A           82 LNMRLSQQRADSVASALITQGVDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSPLLE  143 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCGGG-EEEEECTTTCCSSCSSSHHHHHHHSEEEEEEEECSS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCHHE-EEEEEECCCCCCCCCCCHHHHHHCCCEEEEEECCCH
T ss_conf             73689999999999999985999325-999998675777999297789735979999971514