HHsearch results for GI: 254780953 and protein with PDBid: 2k1s_A
>2k1s_A Inner membrane lipoprotein YIAD; abbababab, OMPA, alpha beta, palmitate, transmembrane, structural genomics, PSI-2; NMR {Escherichia coli K12}
Probab=100.00 E-value=9.7e-36 Score=218.14 Aligned_cols=141 Identities=33% Similarity=0.502 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCEECC-CHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHH
Q ss_conf 37888999999720178358860875899852211128-81310999999999999999858994899998037787200
Q gi|254780953|r 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124 (190)
Q Consensus 46 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~-~~a~l~~~~~~~L~~ia~~l~~~~~~~i~I~GHTD~~g~~~ 124 (190)
++|..++.++..+...++.+...++.+.+.++..++|. +++.|+++++..|+.++..|+.+|+..|.|+||||..|+..
T Consensus 2 ~~d~~e~~Lr~~l~~~~v~v~~~~~~~~l~l~~~v~F~~~s~~L~~~~~~~L~~ia~~L~~~~~~~i~I~GhtD~~g~~~ 81 (149)
T 2k1s_A 2 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHD 81 (149)
T ss_dssp CSHHHHHHHHHHTTTTSCEEEEETTEEEEEEEHHHHBSSSSSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEECCCTTCHH
T ss_pred CHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHH
T ss_conf 77899999999862599679997999999868740542997226988999999999999648995799998807868955
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEEECCHH
Q ss_conf 111225899999999888523874516999970345888997697798529916999930101
Q gi|254780953|r 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187 (190)
Q Consensus 125 ~N~~LS~~RA~~V~~~L~~~g~~~~r~i~v~g~G~~~p~~~n~~~~~ra~NRRVei~i~~~~~ 187 (190)
+||.||.+||.+|+.||+..|+.+.| +.+.|||+++|+++|+++++|++||||||.|+|.-+
T Consensus 82 ~N~~LS~~RA~~V~~~L~~~Gi~~~r-l~~~g~G~~~P~~~~~~~~~~~~NRRVei~i~P~~~ 143 (149)
T 2k1s_A 82 LNMRLSQQRADSVASALITQGVDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSPLLE 143 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGG-EEEEECTTTCCSSCSSSHHHHHHHSEEEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHE-EEEEEECCCCCCCCCCCHHHHHHCCCEEEEEECCCH
T ss_conf 73689999999999999985999325-999998675777999297789735979999971514