HHsearch results for GI: 254780953 and protein with PDBid: 3ldt_A
>3ldt_A Outer membrane protein, OMPA family protein; OMPA-like domain, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Legionella pneumophila}
Probab=100.00 E-value=1.3e-36 Score=223.02 Aligned_cols=144 Identities=28% Similarity=0.421 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCEECC-CHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
Q ss_conf 012337888999999720178358860875899852211128-8131099999999999999985899489999803778
Q gi|254780953|r 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120 (190)
Q Consensus 42 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~-~~a~l~~~~~~~L~~ia~~l~~~~~~~i~I~GHTD~~ 120 (190)
....+++.. .++...+...++.+...++.+.+.++..++|+ +++.|+++++..|++|+.+|+++|+..|.|+||||+.
T Consensus 19 ~~~~~~d~~-~~~~~~l~~~~v~v~~~~~~~~v~l~~~v~F~~~s~~l~~~~~~~L~~ia~~L~~~p~~~i~I~GhTD~~ 97 (169)
T 3ldt_A 19 VASIYRDSK-RKIIRDLQKQDIQYVEYGDTRTLIIPTDKYFMFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNV 97 (169)
T ss_dssp TTHHHHHHH-HHHHHHHHHTTCEEEEETTEEEEEEETTTCCC-CCHHHHHHHCHHHHHHHHHHTTCTTSCEEEEEECTTS
T ss_pred HHHHHHHHH-HHHHHHHHCCCCEEEEECCEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf 764329999-9999998539937999699899990688347299642698899999999999997899579999973898
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEEEC-CHH
Q ss_conf 7200111225899999999888523874516999970345888997697798529916999930-101
Q gi|254780953|r 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP-RGN 187 (190)
Q Consensus 121 g~~~~N~~LS~~RA~~V~~~L~~~g~~~~r~i~v~g~G~~~p~~~n~~~~~ra~NRRVei~i~~-~~~ 187 (190)
|++.|||.||++||.+|++||+.+|+++.| |.+.|||+++|+++|+++++|++||||||.|++ +|+
T Consensus 98 g~~~~N~~LS~~RA~~V~~~L~~~Gv~~~r-i~~~G~G~~~Pv~~n~t~egra~NRRVei~i~~~~g~ 164 (169)
T 3ldt_A 98 GSRSHKRKLSQAQAETMMTFLWANGIAAKR-LKAEGYGDKNAISDNAIIHGSAQNRRIEIQWFTSEGH 164 (169)
T ss_dssp CCC--CHHHHHHHHHHHHHHHHHTTCCTTT-EEECCTTCTTSCCCTTTSCGGGGTSEEEEEEECCCC-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCHHH-EEEEEECCCCCCCCCCCHHHHHHCCCEEEEEEECCCC
T ss_conf 976675779999999999999985999799-8999975668679993988998549889999958987