HHSEARCH alignment of GI: 254780953 and SCOP domain: d2aizp1

Alignment
>d2aizp1 d.79.7.1 (P:1-134) Peptidoglycan-associated lipoprotein, PAL, periplasmic domain {Haemophilus influenzae [TaxId: 727]}
Probab=99.96  E-value=2e-29  Score=181.54  Aligned_cols=103  Identities=23%  Similarity=0.404  Sum_probs=97.5

Q ss_pred             CEECC-CHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             11128-81310999999999999999858994899998037787200111225899999999888523874516999970
Q gi|254780953|r   79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF  157 (190)
Q Consensus        79 ~~~f~-~~a~l~~~~~~~L~~ia~~l~~~~~~~i~I~GHTD~~g~~~~N~~LS~~RA~~V~~~L~~~g~~~~r~i~v~g~  157 (190)
                      .+||+ +++.|+++++..|++++.+|+.+|+.+|.|.||||..|+..|||.||++||.+|++||+..|+++.| |.+.||
T Consensus        31 ~I~F~~~s~~L~~~~~~~L~~la~~l~~~~~~~i~I~GhtD~~g~~~~N~~LS~~RA~~V~~~L~~~Gi~~~r-i~~~g~  109 (134)
T d2aizp1          31 TVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGK-LGTVSY  109 (134)
T ss_dssp             EEECCTTCCCCCHHHHHHHHHHHHHHHHSTTCCEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGG-EEEEEC
T ss_pred             EEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC-CEEEEC
T ss_conf             1883799812498899999999999986999689996043433221110137899999999899771875345-513775


Q ss_pred             CCCCCCCCCCCHHHHHCCCCEEEEE
Q ss_conf             3458889976977985299169999
Q gi|254780953|r  158 AYKYPIDTNDTKVGRQNNQRIEIQI  182 (190)
Q Consensus       158 G~~~p~~~n~~~~~ra~NRRVei~i  182 (190)
                      |+++|+.++.++++|++||||||+.
T Consensus       110 G~~~P~~~~~~~~~~~~NRRVeiv~  134 (134)
T d2aizp1         110 GEEKPAVLGHDEAAYSKNRRAVLAY  134 (134)
T ss_dssp             TTTSCSSCSCSHHHHHHHSEEEEEC
T ss_pred             CCCCCCCCCCCHHHHHCCCCEEEEC
T ss_conf             4337578891977986239899959


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: OmpA-like
family: OmpA-like
domain: Peptidoglycan-associated lipoprotein, PAL, periplasmic domain
species: Haemophilus influenzae [TaxId: 727]