BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780953|ref|YP_003065366.1| OmpA/MotB [Candidatus
Liberibacter asiaticus str. psy62]
(190 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780953|ref|YP_003065366.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62]
gi|254040630|gb|ACT57426.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62]
Length = 190
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 190/190 (100%), Positives = 190/190 (100%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD
Sbjct: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI
Sbjct: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI
Sbjct: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
Query: 181 QIFPRGNIKK 190
QIFPRGNIKK
Sbjct: 181 QIFPRGNIKK 190
>gi|56476024|ref|YP_157613.1| outer membrane lipoprotein [Aromatoleum aromaticum EbN1]
gi|56312067|emb|CAI06712.1| outer membrane lipoprotein containing OmpA/MotB domain [Aromatoleum
aromaticum EbN1]
Length = 232
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 1 MIKELGLSMFIMTTISGCG-----------------------------LASREKKKVFLH 31
M+K L+ I+GC S ++ K L
Sbjct: 1 MMKTALLATVTTLLIAGCAQNPYYGDTAKTARGATIGAGAGAVLGSVVSGSGDRTKGGLI 60
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEK 90
+ V G +DK E E + Q+ TG+ V R GD I P +++F + ++
Sbjct: 61 GAAVGATVGGLIGRQMDKQEAELREQMAGTGVEVQRQGDTIRLQAPENITFDTNRADIKP 120
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+F P+L +A + ++P TVI ++ HTDS+G+ N +S+ RA + + +
Sbjct: 121 QFQPVLGQLAQSIQQYPDTVIQVEGHTDSVGSASYNQTLSENRAGAV-RSYLIQRGVDAN 179
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++ G+ P+ N T GR N+R+E+ I
Sbjct: 180 RLAAVGYGLTRPVADNSTAAGRAQNRRVEMLIV 212
>gi|239832093|ref|ZP_04680422.1| OmpA family protein [Ochrobactrum intermedium LMG 3301]
gi|239824360|gb|EEQ95928.1| OmpA family protein [Ochrobactrum intermedium LMG 3301]
Length = 260
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 34/217 (15%)
Query: 1 MIKELGLSMFIMTTISGCGL--------------------------------ASREKKKV 28
M+K+ G+++F T ++GC +SR ++
Sbjct: 40 MLKKTGIALFAATFLAGCTTDPYTGEQKMSNTAGGAAIGAAVGALGGLMVGGSSRAQRNA 99
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
L + + G+ +D+ E+E + QLQ TG+ V+R GD I +P ++F +
Sbjct: 100 VLIGAGIGALGGGAIGNYMDRQENELRAQLQGTGVSVTRNGDQIILNMPSSITFDTDQDQ 159
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ +F P L +A +L KF T++ + HTDS G++ +N +SQ RA + S +
Sbjct: 160 VKSQFYPTLNSVAIVLRKFNQTLVDVYGHTDSTGSVSHNQALSQRRAASVAS-YLGSQGI 218
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +V G+ P+ TN T GR N+R+EIQI P
Sbjct: 219 DPRRFAVIGYGASQPVATNATPEGRAQNRRVEIQISP 255
>gi|294852539|ref|ZP_06793212.1| outer membrane protein [Brucella sp. NVSL 07-0026]
gi|294821128|gb|EFG38127.1| outer membrane protein [Brucella sp. NVSL 07-0026]
Length = 258
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 34/217 (15%)
Query: 1 MIKELGLSMFIMTTISGCGL--------------------------------ASREKKKV 28
M+K+ G+++ T ++GC +SR ++
Sbjct: 13 MLKKTGIALICATFLAGCTTDPYTGQQKVSNTTGGAAIGAAVGALGGLMVGGSSRAQRNA 72
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
L + + G+ +D+ E E + QLQ TG+ V+R GD I +P +++F +
Sbjct: 73 VLIGAGIGALGGGLIGNYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQ 132
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ +F P L +A +L KF T++ + TDS G+ N +SQ RA + S +
Sbjct: 133 VKSQFYPTLNSVAIVLRKFDKTLVDVYGFTDSTGSASYNQALSQRRAASVAS-YLDSQGI 191
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +V G+ PI +N T GR N+R+EIQI P
Sbjct: 192 DPRRFAVIGYGASQPIASNATPEGRAQNRRVEIQISP 228
>gi|148559799|ref|YP_001259124.1| OmpA family protein [Brucella ovis ATCC 25840]
gi|148371056|gb|ABQ61035.1| OmpA family protein [Brucella ovis ATCC 25840]
Length = 243
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 34/217 (15%)
Query: 1 MIKELGLSMFIMTTISGCGL--------------------------------ASREKKKV 28
M+K+ G+++ T ++GC +SR ++
Sbjct: 24 MLKKTGIALICATFLAGCTTDPYTGQQKVSNTTGGAAIGAAVGALGGLMVGGSSRAQRNA 83
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
L + + G+ +D+ E E + QLQ TG+ V+R GD I +P +++F +
Sbjct: 84 VLIGAGIGALGGGLIGNYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQ 143
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ +F P L +A +L KF T++ + TDS G+ N +SQ RA + S +
Sbjct: 144 VKSQFYPTLNSVAIVLRKFDKTLVDVYGFTDSTGSASYNQALSQRRAASVAS-YLDSQGI 202
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +V G+ PI +N T GR N+R+EIQI P
Sbjct: 203 DPRRFAVIGYGASQPIASNATPEGRAQNRRVEIQISP 239
>gi|153009315|ref|YP_001370530.1| OmpA/MotB domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151561203|gb|ABS14701.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 221
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 1 MIKELGLSMFIMTTISGCGL--------------------------------ASREKKKV 28
M+K++G+++F T ++GC +SR ++
Sbjct: 1 MLKKIGIALFAATFLAGCTTDPYTGEQKMSNTAGGAAIGAAVGALGGLMVGGSSRAQRNA 60
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
L + + G+ +D+ E+E + QLQ TG+ V+R GD I +P ++F +
Sbjct: 61 VLIGAGIGALGGGAIGNYMDRQENELRAQLQGTGVSVTRNGDQIILNMPSSITFDTDQDQ 120
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ +F P L +A +L KF T++ + HTDS G++ +N +SQ RA + S +
Sbjct: 121 VKSQFYPTLNSVAIVLRKFNQTLVDVYGHTDSTGSVSHNQALSQRRAASVAS-YLGSQGI 179
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +V G+ P+ TN T GR N+R+EIQI P
Sbjct: 180 DPRRFAVIGYGASQPVATNATPEGRAQNRRVEIQISP 216
>gi|225627675|ref|ZP_03785712.1| OmpA family protein [Brucella ceti str. Cudo]
gi|225617680|gb|EEH14725.1| OmpA family protein [Brucella ceti str. Cudo]
Length = 243
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 34/217 (15%)
Query: 1 MIKELGLSMFIMTTISGCGL--------------------------------ASREKKKV 28
M+K+ G+++ T ++GC +SR ++
Sbjct: 24 MLKKTGIALICATFLAGCTTDPYTGQQKVSNTTGGAAIGAAVGALGGLMVGGSSRAQRNA 83
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
L + + G+ +D+ E E + QLQ TG+ V+R GD I +P +++F +
Sbjct: 84 VLIGAGIGALGGGLIGNYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQ 143
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ +F P L +A +L KF T++ + TDS G+ N +SQ RA + S +
Sbjct: 144 VKSQFYPTLNSVAIVLRKFDKTLVDVYGFTDSTGSASYNQALSQRRAASVAS-YLDSQGI 202
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +V G+ PI +N T GR N+R+EIQI P
Sbjct: 203 DPRRFAVIGYGASQPIASNATPEGRAQNRRVEIQISP 239
>gi|254693909|ref|ZP_05155737.1| Bacterial outer membrane protein [Brucella abortus bv. 3 str.
Tulya]
gi|261214200|ref|ZP_05928481.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|260915807|gb|EEX82668.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
Length = 216
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 30/213 (14%)
Query: 1 MIKELGLSMFIMTTISGCGL----------------------------ASREKKKVFLHK 32
M+K+ G+++ T ++GC +SR ++ L
Sbjct: 1 MLKKTGIALICATFLAGCTTDPYTGQQKVSNTTGGAAVGALGGLMVGGSSRAQRNAVLIG 60
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKK 91
+ + G+ +D+ E E + QLQ TG+ V+R GD I +P +++F + ++ +
Sbjct: 61 AGIGALGGGLIGNYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQVKSQ 120
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F P L +A +L KF T++ + TDS G+ N +SQ RA + S + R
Sbjct: 121 FYPTLNSVAIVLRKFDKTLVDVYGFTDSTGSASYNQALSQRRAASVAS-YLDSQGIDPRR 179
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
SV G+ PI +N T GR N+R+EIQI P
Sbjct: 180 FSVIGYGASQPIVSNATPEGRAQNRRVEIQISP 212
>gi|237815623|ref|ZP_04594620.1| OmpA family protein [Brucella abortus str. 2308 A]
gi|237788921|gb|EEP63132.1| OmpA family protein [Brucella abortus str. 2308 A]
Length = 243
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 34/217 (15%)
Query: 1 MIKELGLSMFIMTTISGCGL--------------------------------ASREKKKV 28
M+K+ G+++ T ++GC +SR ++
Sbjct: 24 MLKKTGIALICATFLAGCTTDPYTGQQKVSNTTGGAAIGAAVGALGGLMVGGSSRAQRNA 83
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
L + + G+ +D+ E E + QLQ TG+ V+R GD I +P +++F +
Sbjct: 84 VLIGAGIGALGGGLIGNYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQ 143
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ +F P L +A +L KF T++ + TDS G+ N +SQ RA + S +
Sbjct: 144 VKSQFYPTLNSVAIVLRKFDKTLVDVYGFTDSTGSASYNQALSQRRAASVAS-YLDSQGI 202
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R SV G+ PI +N T GR N+R+EIQI P
Sbjct: 203 DPRRFSVIGYGASQPIVSNATPEGRAQNRRVEIQISP 239
>gi|23502081|ref|NP_698208.1| OmpA family protein [Brucella suis 1330]
gi|161619159|ref|YP_001593046.1| OmpA/MotB domain-containing protein [Brucella canis ATCC 23365]
gi|163843469|ref|YP_001627873.1| OmpA/MotB domain-containing protein [Brucella suis ATCC 23445]
gi|225852700|ref|YP_002732933.1| OmpA/MotB domain-containing protein [Brucella melitensis ATCC
23457]
gi|254701944|ref|ZP_05163772.1| OmpA family protein [Brucella suis bv. 5 str. 513]
gi|254704489|ref|ZP_05166317.1| OmpA family protein [Brucella suis bv. 3 str. 686]
gi|254706615|ref|ZP_05168443.1| OmpA family protein [Brucella pinnipedialis M163/99/10]
gi|254710275|ref|ZP_05172086.1| OmpA family protein [Brucella pinnipedialis B2/94]
gi|254714272|ref|ZP_05176083.1| OmpA family protein [Brucella ceti M644/93/1]
gi|254717709|ref|ZP_05179520.1| OmpA family protein [Brucella ceti M13/05/1]
gi|256031769|ref|ZP_05445383.1| OmpA family protein [Brucella pinnipedialis M292/94/1]
gi|256044854|ref|ZP_05447758.1| OmpA family protein [Brucella melitensis bv. 1 str. Rev.1]
gi|256061284|ref|ZP_05451434.1| OmpA family protein [Brucella neotomae 5K33]
gi|256113758|ref|ZP_05454562.1| OmpA family protein [Brucella melitensis bv. 3 str. Ether]
gi|256159939|ref|ZP_05457657.1| OmpA family protein [Brucella ceti M490/95/1]
gi|256255170|ref|ZP_05460706.1| OmpA family protein [Brucella ceti B1/94]
gi|256369628|ref|YP_003107138.1| OmpA family protein [Brucella microti CCM 4915]
gi|260168903|ref|ZP_05755714.1| OmpA family protein [Brucella sp. F5/99]
gi|260565544|ref|ZP_05836028.1| bacterial outer membrane protein [Brucella melitensis bv. 1 str.
16M]
gi|260566267|ref|ZP_05836737.1| bacterial outer membrane protein [Brucella suis bv. 4 str. 40]
gi|261219551|ref|ZP_05933832.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1]
gi|261314075|ref|ZP_05953272.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261317837|ref|ZP_05957034.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94]
gi|261322046|ref|ZP_05961243.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1]
gi|261752512|ref|ZP_05996221.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261755171|ref|ZP_05998880.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686]
gi|261758395|ref|ZP_06002104.1| bacterial outer membrane protein [Brucella sp. F5/99]
gi|306840330|ref|ZP_07473102.1| OmpA family protein [Brucella sp. BO2]
gi|306844105|ref|ZP_07476699.1| OmpA family protein [Brucella sp. BO1]
gi|23348039|gb|AAN30123.1| OmpA family protein [Brucella suis 1330]
gi|161335970|gb|ABX62275.1| OmpA/MotB domain protein [Brucella canis ATCC 23365]
gi|163674192|gb|ABY38303.1| OmpA/MotB domain protein [Brucella suis ATCC 23445]
gi|225641065|gb|ACO00979.1| OmpA/MotB domain protein [Brucella melitensis ATCC 23457]
gi|255999790|gb|ACU48189.1| OmpA family protein [Brucella microti CCM 4915]
gi|260151612|gb|EEW86706.1| bacterial outer membrane protein [Brucella melitensis bv. 1 str.
16M]
gi|260155785|gb|EEW90865.1| bacterial outer membrane protein [Brucella suis bv. 4 str. 40]
gi|260924640|gb|EEX91208.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1]
gi|261294736|gb|EEX98232.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1]
gi|261297060|gb|EEY00557.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94]
gi|261303101|gb|EEY06598.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261738379|gb|EEY26375.1| bacterial outer membrane protein [Brucella sp. F5/99]
gi|261742265|gb|EEY30191.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261744924|gb|EEY32850.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686]
gi|306275548|gb|EFM57280.1| OmpA family protein [Brucella sp. BO1]
gi|306289729|gb|EFM60918.1| OmpA family protein [Brucella sp. BO2]
Length = 220
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 34/217 (15%)
Query: 1 MIKELGLSMFIMTTISGCGL--------------------------------ASREKKKV 28
M+K+ G+++ T ++GC +SR ++
Sbjct: 1 MLKKTGIALICATFLAGCTTDPYTGQQKVSNTTGGAAIGAAVGALGGLMVGGSSRAQRNA 60
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
L + + G+ +D+ E E + QLQ TG+ V+R GD I +P +++F +
Sbjct: 61 VLIGAGIGALGGGLIGNYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQ 120
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ +F P L +A +L KF T++ + TDS G+ N +SQ RA + S +
Sbjct: 121 VKSQFYPTLNSVAIVLRKFDKTLVDVYGFTDSTGSASYNQALSQRRAASVAS-YLDSQGI 179
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +V G+ PI +N T GR N+R+EIQI P
Sbjct: 180 DPRRFAVIGYGASQPIASNATPEGRAQNRRVEIQISP 216
>gi|17987069|ref|NP_539703.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|261222366|ref|ZP_05936647.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94]
gi|261325291|ref|ZP_05964488.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33]
gi|265988867|ref|ZP_06101424.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|265991281|ref|ZP_06103838.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265995118|ref|ZP_06107675.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|265998331|ref|ZP_06110888.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1]
gi|265999432|ref|ZP_05466341.2| bacterial outer membrane protein [Brucella melitensis bv. 2 str.
63/9]
gi|17982726|gb|AAL51967.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|260920950|gb|EEX87603.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94]
gi|261301271|gb|EEY04768.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33]
gi|262552799|gb|EEZ08789.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1]
gi|262766231|gb|EEZ12020.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|263002065|gb|EEZ14640.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093937|gb|EEZ17871.1| bacterial outer membrane protein [Brucella melitensis bv. 2 str.
63/9]
gi|264661064|gb|EEZ31325.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|326409224|gb|ADZ66289.1| OmpA/MotB domain-containing protein [Brucella melitensis M28]
gi|326538933|gb|ADZ87148.1| OmpA/MotB domain protein [Brucella melitensis M5-90]
Length = 232
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 34/217 (15%)
Query: 1 MIKELGLSMFIMTTISGCGL--------------------------------ASREKKKV 28
M+K+ G+++ T ++GC +SR ++
Sbjct: 13 MLKKTGIALICATFLAGCTTDPYTGQQKVSNTTGGAAIGAAVGALGGLMVGGSSRAQRNA 72
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
L + + G+ +D+ E E + QLQ TG+ V+R GD I +P +++F +
Sbjct: 73 VLIGAGIGALGGGLIGNYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQ 132
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ +F P L +A +L KF T++ + TDS G+ N +SQ RA + S +
Sbjct: 133 VKSQFYPTLNSVAIVLRKFDKTLVDVYGFTDSTGSASYNQALSQRRAASVAS-YLDSQGI 191
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +V G+ PI +N T GR N+R+EIQI P
Sbjct: 192 DPRRFAVIGYGASQPIASNATPEGRAQNRRVEIQISP 228
>gi|62290115|ref|YP_221908.1| OmpA family protein [Brucella abortus bv. 1 str. 9-941]
gi|82700038|ref|YP_414612.1| outer membrane protein MotY [Brucella melitensis biovar Abortus
2308]
gi|189024353|ref|YP_001935121.1| outer membrane protein [Brucella abortus S19]
gi|254689424|ref|ZP_05152678.1| Bacterial outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|254697559|ref|ZP_05159387.1| Bacterial outer membrane protein [Brucella abortus bv. 2 str.
86/8/59]
gi|254730453|ref|ZP_05189031.1| Bacterial outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|256257670|ref|ZP_05463206.1| Bacterial outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|260546663|ref|ZP_05822402.1| bacterial outer membrane protein [Brucella abortus NCTC 8038]
gi|260754947|ref|ZP_05867295.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260758163|ref|ZP_05870511.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260761989|ref|ZP_05874332.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|62196247|gb|AAX74547.1| OmpA family protein [Brucella abortus bv. 1 str. 9-941]
gi|82616139|emb|CAJ11182.1| MotY protein:Bacterial outer membrane protein:OmpA/MotB domain
[Brucella melitensis biovar Abortus 2308]
gi|189019925|gb|ACD72647.1| Bacterial outer membrane protein [Brucella abortus S19]
gi|260095713|gb|EEW79590.1| bacterial outer membrane protein [Brucella abortus NCTC 8038]
gi|260668481|gb|EEX55421.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260672421|gb|EEX59242.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675055|gb|EEX61876.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str.
870]
Length = 220
Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 34/217 (15%)
Query: 1 MIKELGLSMFIMTTISGCGL--------------------------------ASREKKKV 28
M+K+ G+++ T ++GC +SR ++
Sbjct: 1 MLKKTGIALICATFLAGCTTDPYTGQQKVSNTTGGAAIGAAVGALGGLMVGGSSRAQRNA 60
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
L + + G+ +D+ E E + QLQ TG+ V+R GD I +P +++F +
Sbjct: 61 VLIGAGIGALGGGLIGNYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQ 120
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ +F P L +A +L KF T++ + TDS G+ N +SQ RA + S +
Sbjct: 121 VKSQFYPTLNSVAIVLRKFDKTLVDVYGFTDSTGSASYNQALSQRRAASVAS-YLDSQGI 179
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R SV G+ PI +N T GR N+R+EIQI P
Sbjct: 180 DPRRFSVIGYGASQPIVSNATPEGRAQNRRVEIQISP 216
>gi|260883956|ref|ZP_05895570.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|297248510|ref|ZP_06932228.1| outer membrane protein [Brucella abortus bv. 5 str. B3196]
gi|260873484|gb|EEX80553.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|297175679|gb|EFH35026.1| outer membrane protein [Brucella abortus bv. 5 str. B3196]
Length = 232
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 34/217 (15%)
Query: 1 MIKELGLSMFIMTTISGCGL--------------------------------ASREKKKV 28
M+K+ G+++ T ++GC +SR ++
Sbjct: 13 MLKKTGIALICATFLAGCTTDPYTGQQKVSNTTGGAAIGAAVGALGGLMVGGSSRAQRNA 72
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
L + + G+ +D+ E E + QLQ TG+ V+R GD I +P +++F +
Sbjct: 73 VLIGAGIGALGGGLIGNYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQ 132
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ +F P L +A +L KF T++ + TDS G+ N +SQ RA + S +
Sbjct: 133 VKSQFYPTLNSVAIVLRKFDKTLVDVYGFTDSTGSASYNQALSQRRAASVAS-YLDSQGI 191
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R SV G+ PI +N T GR N+R+EIQI P
Sbjct: 192 DPRRFSVIGYGASQPIVSNATPEGRAQNRRVEIQISP 228
>gi|56460671|ref|YP_155952.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Idiomarina loihiensis L2TR]
gi|56179681|gb|AAV82403.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Idiomarina loihiensis L2TR]
Length = 208
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 25/208 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG---------------- 44
M K + MF + GC S + K + ++ K G
Sbjct: 1 MKKLVLTMMFSSLALVGCENMSNTQ-KGASIGAVTGALLGKGTGDHDKSRYVWGAAVGAL 59
Query: 45 ------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQ 97
S +DK E+EF+ +L D+G+ V R GD + +P +++F + + F P+L
Sbjct: 60 AGGAIGSYMDKQEEEFREELADSGVKVIRDGDNLRLQLPSNITFATGSANISQSFNPVLD 119
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A +L K+ T + I+ HTDS G+ + N +S RA+ +++ L+ +R ++ G+
Sbjct: 120 DVARVLKKYEKTTMLIEGHTDSTGSAEYNQQLSLNRANAVRNNLVGN-GVDSRRVTTEGY 178
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
P+ NDT+ GRQ N+R+E++I P
Sbjct: 179 GESMPVADNDTESGRQLNRRVELRIVPN 206
>gi|254719262|ref|ZP_05181073.1| OmpA family protein [Brucella sp. 83/13]
gi|265984261|ref|ZP_06096996.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13]
gi|306838013|ref|ZP_07470871.1| OmpA family protein [Brucella sp. NF 2653]
gi|264662853|gb|EEZ33114.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13]
gi|306406937|gb|EFM63158.1| OmpA family protein [Brucella sp. NF 2653]
Length = 220
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 1 MIKELGLSMFIMTTISGCGL--------------------------------ASREKKKV 28
M+K+ G+++ T ++GC +SR ++
Sbjct: 1 MLKKTGIALICATFLAGCTTDPYTGQQKVSNTTGGAAIGAAVGALGGLMVGGSSRAQRNA 60
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
L + + G+ +D+ E E + Q Q TG+ V+R GD I +P +++F +
Sbjct: 61 VLIGAGIGALGGGLIGNYMDRQEAELRAQSQGTGVSVTRNGDRIILNMPSNITFDTDQDQ 120
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ +F P L +A +L KF T++ + TDS G+ N +SQ RA + S +
Sbjct: 121 VKSQFYPTLNSVAIVLRKFDKTLVDVYGFTDSTGSASYNQALSQRRAASVAS-YLDSQGI 179
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +V G+ PI +N T GR N+R+EIQI P
Sbjct: 180 DPRRFAVIGYGASQPIASNATPEGRAQNRRVEIQISP 216
>gi|90420689|ref|ZP_01228595.1| outer membrane protein [Aurantimonas manganoxydans SI85-9A1]
gi|90334980|gb|EAS48741.1| outer membrane protein [Aurantimonas manganoxydans SI85-9A1]
Length = 220
Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 2 IKELGLSMFIMTTISGCGL---------------------------------ASREKKKV 28
+K+L + + +GC A + +
Sbjct: 1 MKKLAFVLALTVAFAGCTTDPYTGEQKLSNTVGGAGIGAGVGALGGYLVGRAAGVDSGRA 60
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
L + + G+ +D E + + QL+ TG+ V+R+GD I +P +++F +
Sbjct: 61 ALIGAGIGTLGGGAVGAYMDNQEAKLRDQLRGTGVSVTRVGDRIILNMPSNITFPTDQSS 120
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
+ F P L +A +L ++ +++ + HTDS G+ N +SQ+RA + L +
Sbjct: 121 ILPAFYPTLNSVALVLKEYDKSIVNVYGHTDSQGSDGYNFTLSQQRASSVSQLLASQ-GV 179
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R ++ +GF P+ +NDT+ GR N+R+EI I P
Sbjct: 180 DPRRLNTQGFGESQPVASNDTESGRAQNRRVEIAISP 216
>gi|254428835|ref|ZP_05042542.1| Rickettsia 17 kDa surface antigen family [Alcanivorax sp. DG881]
gi|196195004|gb|EDX89963.1| Rickettsia 17 kDa surface antigen family [Alcanivorax sp. DG881]
Length = 221
Score = 147 bits (370), Expect = 9e-34, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 104/219 (47%), Gaps = 37/219 (16%)
Query: 2 IKELG--LSMFIMTTISGCGL---------------------------------ASREKK 26
+K L++ ++GC +++E+K
Sbjct: 1 MKRFAGSLALASAIAVTGCSTVNPYTGEKQTSKATSGAAIGAVAGALIGIATSDSAKERK 60
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+ L + + G +D E + + +L+ G+ V+R G+ I +P +++F ++
Sbjct: 61 ERALAGAGIGAVTGGGVGYYMDVQEAKLRQKLEGAGVSVTRDGENIILNMPGNLTFATDS 120
Query: 87 F-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
++ F P+L ++ +LN++ ST+I + HTDS G + NLL+SQ+RA + + L G
Sbjct: 121 TNVKSSFDPVLDAVSEVLNEYKSTMIQVAGHTDSTGGDRYNLLLSQQRAQAVSNKLSGYG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V R +V GF PI +N+T GR+ N+R+E+ + P
Sbjct: 181 VEQVRLDTV-GFGETQPIASNNTASGREQNRRVELTLLP 218
>gi|110834272|ref|YP_693131.1| OmpA family protein [Alcanivorax borkumensis SK2]
gi|110647383|emb|CAL16859.1| OmpA family protein [Alcanivorax borkumensis SK2]
Length = 221
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 99/219 (45%), Gaps = 37/219 (16%)
Query: 2 IKELG--LSMFIMTTISGCGL---------------------------------ASREKK 26
+K +++ ++GC +++E+K
Sbjct: 1 MKRFAGSIALASAIAVTGCSTINPYTGEKQTSKATSGAAIGAVAGALIGIATSDSAKERK 60
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+ L + + G +D E + + +L+ G+ V+R G+ I +P +++F ++
Sbjct: 61 ERALAGAGIGAVTGGGVGYYMDVQEAKLRQKLEGAGVSVTRDGENIILNMPGNLTFATDS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
++ F P+L+ +A +L ++ ST+I + HTDS G + NLL+SQ+RA + + +
Sbjct: 121 TDVKPSFDPVLEAVAEVLKEYKSTMIQVAGHTDSTGGDRYNLLLSQQRAQAVSNK-LSAF 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ GF PI +N + GR+ N+R+E+ + P
Sbjct: 180 GVEQVRLDPVGFGETQPIASNSSASGREQNRRVELTLLP 218
>gi|85711329|ref|ZP_01042388.1| Outer membrane protein and related
peptidoglycan-associated(lipo)proteins [Idiomarina
baltica OS145]
gi|85694830|gb|EAQ32769.1| Outer membrane protein and related
peptidoglycan-associated(lipo)proteins [Idiomarina
baltica OS145]
Length = 188
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 54/168 (32%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
K +L + + G+ +DK E+ F+ +L +G+ V R GD I +P ++
Sbjct: 22 TGDHDKSRYLWGAAVGALAGSAIGNYMDKQEEAFRDELSGSGVQVIRDGDNIRLQLPGNI 81
Query: 81 SFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+F S + + F P+L+ +A +LNK+ T + I+ HTDS G+ N +S RA+ +++
Sbjct: 82 TFASESANISQNFYPVLEDVAAVLNKYNKTTMMIEGHTDSTGSADYNQQLSLNRANAVRN 141
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
YL+ +R ++ +GF PI TNDT GRQ N+R+E++I P
Sbjct: 142 YLVG-YGVDSRRVTTQGFGESQPIATNDTAQGRQQNRRVELRIIPNQQ 188
>gi|109900555|ref|YP_663810.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
gi|109702836|gb|ABG42756.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
Length = 215
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 29/212 (13%)
Query: 1 MIKELGLSMFIM-TTISGCGL--------------------------ASREKKKVFLHKS 33
M K+L + + + +SGC K ++ +
Sbjct: 1 MYKKLVIGVALSGLVLSGCASNSMGGASNTQKGAGIGAIVGALIGKGTGDNDKSRYVWGA 60
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKF 92
+ G+ +DK E+EF+ +L D+G+ V R GD + Y+P ++F ++ F
Sbjct: 61 AVGALAGSAIGNYMDKQEEEFREELADSGVEVYREGDTLRLYMPGSITFSSGNASVDSSF 120
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
P+L+ +A ++NK+ T + ++ HTD+ G N +S+ RA+ +K+ + + NR +
Sbjct: 121 YPVLKDVALVINKYEKTTLMVEGHTDNTGADDMNQRLSEARANSVKN-YLVQNGVDNRRV 179
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S G PI N T+ GRQ N+R+E++I P
Sbjct: 180 STLGMGEYTPIADNATQAGRQKNRRVELKIIP 211
>gi|163759606|ref|ZP_02166691.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
gi|162283203|gb|EDQ33489.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
Length = 215
Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 31/214 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLAS-----------------------------REKKKVFLH 31
M +L ++ +SGC + +K L
Sbjct: 1 MKSKLLIAAIAAVFVSGCTTDPYTGQQKVSNLAGGAALGALGGAALGTLAGGDDRKNALI 60
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEK 90
+ + G +D+ E + + QLQ TG+ V+R+GD I +P +++F + ++
Sbjct: 61 GAGVGALAGGAIGGYMDQQEAQLRAQLQGTGVSVTRVGDKIILNMPSNITFDSDQSAVKP 120
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+F L +A +L KF +++ + HTDS G+ NL +SQ+RA + SYLI + + R
Sbjct: 121 QFYETLNSVALVLQKFNRSLVDVAGHTDSTGSDSYNLTLSQQRAQSVSSYLISQ-GNDAR 179
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GF PI N T GR N+R+EIQI P
Sbjct: 180 RFYTQGFGESRPIADNGTDAGRAANRRVEIQISP 213
>gi|49188511|ref|YP_025325.1| OmpA [Pseudomonas alcaligenes]
gi|5123490|gb|AAD40344.1|U88088_22 OmpA [Pseudomonas alcaligenes]
Length = 220
Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 31/215 (14%)
Query: 2 IKELGLSMFIMTTISGCGLASRE-----------------------------KKKVFLHK 32
+K + + ++ T++GC E + + L
Sbjct: 1 MKSVIAASLVIFTLTGCASIQNEDGTTKNTALYGAGGALAGAVAGALIGKENRAQGALIG 60
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKK 91
+ + +G DK E E + Q++ +G+ V R GD I +P ++F + ++
Sbjct: 61 AAVAGSLGAGYGYYADKQEAELREQMKGSGVQVERQGDEIVIVMPGAITFATGKAEIQPN 120
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F L +A +P + + + HTDS+G+ + N L+SQ RA + +L GV ++R
Sbjct: 121 FANTLNQLAGSFRNYPDSRLIVTGHTDSVGSYEANELLSQRRAQSVAQFLRGNGVQTDR- 179
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
I V G P+ +N T GR N+R+EI++ PR
Sbjct: 180 IEVIGAGPNQPVASNATAEGRAQNRRVEIKLAPRA 214
>gi|114707989|ref|ZP_01440881.1| OmpA family protein [Fulvimarina pelagi HTCC2506]
gi|114536618|gb|EAU39750.1| OmpA family protein [Fulvimarina pelagi HTCC2506]
Length = 221
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 1 MIKELGLSMFIMTTISGCGL---------------------------------ASREKKK 27
MIK++ + + + GC ++
Sbjct: 1 MIKKITAVLCLSVAMGGCTTDPYTGEMKISNTLGGAGLGTGLGAAGGYLVARATGSDEAT 60
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV 86
+ + G+ +D E + + QLQ TG+ V+R+GD I +P +V+F +
Sbjct: 61 AAAIGAGLGGLAGAGIGAYMDNQEAQLRQQLQGTGVSVTRVGDRIILNMPSNVTFPSDQS 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ F P L +A +L KF T++ + HTDS G NL +SQ+RA + +L R
Sbjct: 121 QILPGFYPTLDSVAIVLQKFDETIVNVYGHTDSQGGDGYNLSLSQQRASSVSQFLASR-G 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ ++ +G+ PI N T+ GR N+R+E+QI P
Sbjct: 180 VNPNRLNTQGYGESQPIADNSTEAGRARNRRVEVQISP 217
>gi|241205517|ref|YP_002976613.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240859407|gb|ACS57074.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 221
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASR---------------------------------EKKK 27
MIK+ L + +S C K+
Sbjct: 1 MIKKFVLLAIAASYLSACTTTDPYTGEQKVSNTAGGAALGALGGALVGVAVGGGGHGKRN 60
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV 86
L + + G+ +D+ E E + QL+ TGI V+R GD I +P +++F +
Sbjct: 61 AALIGAGVGALAGGAIGNYMDQQESELRAQLEGTGISVTRNGDNIILNMPSNITFDVDQD 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
++ F P L +A +L KF T+I + HTDS G+L++N +SQ RA + +
Sbjct: 121 AVKPGFYPTLNSVAIVLRKFNRTLIDVNGHTDSTGSLQHNQDLSQRRALSVAD-YLGGQG 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +S GF P+ +N ++ GR N+R+EIQI P
Sbjct: 180 IDQRRVSAVGFGPSQPVASNASEAGRAQNRRVEIQIAP 217
>gi|114319490|ref|YP_741173.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114225884|gb|ABI55683.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 224
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 2/157 (1%)
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVF 87
L + + G +D+ +E + +L+ TG+ V+R G+ + +P HV+F
Sbjct: 66 ALIGAGIGALSGAAVGGYMDRQAEELRQRLRGTGVSVTRDGENVILNMPGHVTFAFDSAD 125
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L F +L +A + N+F T+I + HTDS G + N +S+ RA + YL+ R V+
Sbjct: 126 LRSDFFEVLDSVAIVANEFDQTMIEVAGHTDSTGPAEYNQRLSERRAQTVARYLVGRDVA 185
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R I+V GF + PI +N T+ GRQ N+R+EI P
Sbjct: 186 EMRMIAV-GFGEERPIASNQTEEGRQQNRRVEITFLP 221
>gi|116253010|ref|YP_768848.1| OmpA family outer membrane protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115257658|emb|CAK08755.1| putative OmpA family outer membrane protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 221
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASR---------------------------------EKKK 27
MIK+ L + +S C K+
Sbjct: 1 MIKKFILLAIAASYLSACTTTDPYTGEQKVSNTAGGAALGALGGALVGVAVGGGGHGKRN 60
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV 86
L + + G+ +D+ E E + QL+ TGI V+R GD I +P +++F +
Sbjct: 61 AALIGAGVGALAGGAIGNYMDQQESELRAQLEGTGISVTRNGDNIILNMPSNITFDVDQD 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
++ F P L +A +L KF T+I + HTDS G+L++N +SQ RA + +
Sbjct: 121 AVKPGFYPTLNSVAIVLRKFNRTLIDVNGHTDSTGSLQHNQDLSQRRALSVAD-YLGGQG 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +S GF P+ +N ++ GR N+R+EIQI P
Sbjct: 180 IDQRRVSAVGFGPSQPVASNASEAGRAQNRRVEIQIAP 217
>gi|209550136|ref|YP_002282053.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209535892|gb|ACI55827.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 221
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASR---------------------------------EKKK 27
MIK+ L + ++ C K+
Sbjct: 1 MIKKFVLLAVAASYLTACTTTDPYTGEQKVSNTAGGAALGALGGALVGVAVGGGGHGKRN 60
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV 86
L + + G+ +D+ E E + QL+ TGI V+R GD I +P +++F +
Sbjct: 61 AALIGAGVGALAGGAIGNYMDQQESELRAQLEGTGISVTRNGDNIILNMPSNITFDVDQD 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
++ F P L +A +L KF T+I + HTDS G+L++N +SQ RA + +
Sbjct: 121 AVKPGFYPTLNSVAIVLRKFNRTLIDVNGHTDSTGSLQHNQDLSQRRALSVAD-YLGGQG 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +S GF P+ +N ++ GR N+R+EIQI P
Sbjct: 180 IDQRRVSAVGFGPSQPVASNASEAGRAQNRRVEIQIAP 217
>gi|285017932|ref|YP_003375643.1| hypothetical protein XALc_1141 [Xanthomonas albilineans GPE PC73]
gi|283473150|emb|CBA15656.1| hypothetical protein XALc_1141 [Xanthomonas albilineans]
Length = 231
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 4/182 (2%)
Query: 6 GLSMFIMTTISG--CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L + ++G G ++ E+++ + + + G+ D+ E + + +TGI
Sbjct: 48 ALIGTAVGVVAGLLSGSSATERRQHAMIGAGIGALSGAAIGNYQDRQERALRERTANTGI 107
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V R GD IT +P ++F ++ L+ +F L +A L+++ T+I + HTD+IG+
Sbjct: 108 DVRRDGDNITLNLPDGITFDFNQSTLKPQFYSALNGVAKTLSEYNQTMIEVVGHTDNIGS 167
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S++RA + +YL + I G KYPI N T+ GR N+R+EI++
Sbjct: 168 DAVNQRLSEQRASSVAAYLTAQ-GVQPERIQTLGAGKKYPIADNSTEAGRAQNRRVEIRV 226
Query: 183 FP 184
P
Sbjct: 227 VP 228
>gi|190892542|ref|YP_001979084.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
CIAT 652]
gi|190697821|gb|ACE91906.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
CIAT 652]
gi|327192440|gb|EGE59397.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
CNPAF512]
Length = 221
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG---------------- 44
MIK+ L + +S C + + + + G
Sbjct: 1 MIKKFILLAVAASYLSACTTTDPYTGEQKVSNTAGGAALGALGGALVGVAVGGGGHGKRN 60
Query: 45 -----------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV 86
+ +D+ E E + QL+ TGI V+R GD I +P +++F +
Sbjct: 61 AALIGAGIGALAGGAIGNYMDQQEAELRAQLEGTGISVTRNGDNIILNMPSNITFDVDQD 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
++ F P L +A +L KF T+I + HTDS G+L++N +SQ RA + +
Sbjct: 121 AVKPGFYPTLNSVAIVLRKFNRTLIDVNGHTDSTGSLQHNQDLSQRRALSVAD-YLGGQG 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +S GF P+ +N ++ GR N+R+EIQI P
Sbjct: 180 IDQRRVSAVGFGPSQPVASNASEAGRAQNRRVEIQIAP 217
>gi|332308557|ref|YP_004436408.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175886|gb|AEE25140.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 215
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 29/212 (13%)
Query: 1 MIKELGLSMFIM-TTISGCGL--------------------------ASREKKKVFLHKS 33
M K+L + + + +SGC K ++ +
Sbjct: 1 MYKKLIVGVALSGLVLSGCASNSMGNASNTQKGAGIGAIVGALIGKGTGDNDKSRYVWGA 60
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKF 92
+ G+ +D+ E+EF+ +L D+G+ V R GD++ Y+P ++F ++ F
Sbjct: 61 AVGALAGSAIGNYMDRQEEEFREELADSGVEVYREGDVLRLYMPGSITFSSGNASVDSSF 120
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
P+L+ +A ++NK+ T + ++ HTD+ G N +S+ RA+ +K+ + + NR +
Sbjct: 121 FPVLKDVALVINKYEKTTLMVEGHTDNTGADDMNQRLSEARANSVKN-YLVQNGVDNRRV 179
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S G PI N T+ GRQ N+R+E++I P
Sbjct: 180 STLGMGEYTPIADNTTQAGRQKNRRVELKIIP 211
>gi|86358413|ref|YP_470305.1| outer membrane lipoprotein [Rhizobium etli CFN 42]
gi|86282515|gb|ABC91578.1| outer membrane lipoprotein [Rhizobium etli CFN 42]
Length = 221
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG---------------- 44
MIK+ L + +S C + + + + G
Sbjct: 1 MIKKFVLLAVAASYLSACTTTDPYTGEQKVSNTAGGAALGALGGALVGVAVGGGGHGKRN 60
Query: 45 -----------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV 86
+ +D+ E E + QL+ TGI V+R GD I +P +++F +
Sbjct: 61 AALIGAGIGALAGGAIGNYMDQQEAELRAQLEGTGISVTRNGDNIILNMPSNITFDVDQD 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
++ F P L +A +L KF T+I + HTDS G+L++N +SQ RA + +
Sbjct: 121 AVKPGFYPTLNSVAIVLRKFNRTLIDVNGHTDSTGSLQHNQDLSQRRALSVAD-YLGGQG 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +S GF P+ +N ++ GR N+R+EIQI P
Sbjct: 180 IDQRRVSAVGFGPSQPVASNASEAGRAQNRRVEIQIAP 217
>gi|91792625|ref|YP_562276.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91714627|gb|ABE54553.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 223
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ +++ K L + V G +D E + + QL+ TG+ V+R GD I +P
Sbjct: 56 SASKKDRAKGALIGAASGAAVGTGIGYYMDVQEAKLRKQLKSTGVSVTRSGDNIILNMPN 115
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V+F V E L + +L +A + +F T + I +TDS G+ NL +SQ RA+ +
Sbjct: 116 DVTFGVDETVLSSRAKEVLASVALVAKEFDDTRLHITGYTDSSGSDSYNLRLSQVRANEV 175
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
YL+Q+ V++NR +S G PI N T GR N+R+EI + P
Sbjct: 176 GQYLMQQKVAANRVVS-SGRGESSPIADNGTPAGRAQNRRVEIVLSP 221
>gi|88860858|ref|ZP_01135494.1| putative lipoprotein [Pseudoalteromonas tunicata D2]
gi|88817071|gb|EAR26890.1| putative lipoprotein [Pseudoalteromonas tunicata D2]
Length = 214
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 23/206 (11%)
Query: 2 IKELGL-SMFIMTTISGCG--------------------LASREKKKVFLHKSNDTDIVN 40
+K++ + S+ I +SGC S K K ++ + I
Sbjct: 8 LKKIIIPSVIIPLFLSGCAATNAEKGAAIGAVAGAVLGKSTSNHKDKRLIYGAAIGAIAG 67
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLI 99
GS +DK E F+ +L +G+ V R GD + +P +++F + ++ F L I
Sbjct: 68 AAVGSYMDKQEQAFRDELAGSGVEVVREGDNLRLVMPSNITFATDQSYISTGFHDTLDAI 127
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A ++NK+ T ++I+ HTDS G + N +S++RA +K+YL+ + + R IS +G+
Sbjct: 128 AKVMNKYEKTFLSIEGHTDSTGKTEYNQNLSEQRALSVKNYLLNKQILDVR-ISTQGWGE 186
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFPR 185
PI +N+T GR N+R+EIQI P
Sbjct: 187 SRPIASNETSSGRALNRRVEIQIVPN 212
>gi|222150201|ref|YP_002551158.1| porin [Agrobacterium vitis S4]
gi|221737183|gb|ACM38146.1| porin [Agrobacterium vitis S4]
Length = 221
Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 35/218 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD----------------------- 37
M+K+ L T +S C + + +
Sbjct: 1 MLKKFILLALTATYLSACTTTDPYTGEQKMSNTAGGAMIGAGLGALGGLAVGGGGHGKRN 60
Query: 38 ----------IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV 86
+ GS +D E E + QLQ TG+ V+R GD I +P +++F +
Sbjct: 61 AALIGAGIGALAGGAIGSYMDNQEAELRAQLQGTGVSVTRQGDRIILNMPSNITFPTDQD 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ F P L +A +L KF T++ + HTDS G L++N +SQ RA+ + + +
Sbjct: 121 QVLPPFYPTLNSVAIVLKKFNRTLVDVNGHTDSTGGLQHNQDLSQRRAESVLN-YLGSQG 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +S GF PI TN T GR N+R+E+ I P
Sbjct: 180 VDPRRMSAMGFGPSQPIATNATPQGRAQNRRVEVAISP 217
>gi|190573806|ref|YP_001971651.1| putative outer membrane lipoprotein [Stenotrophomonas maltophilia
K279a]
gi|190011728|emb|CAQ45347.1| putative outer membrane lipoprotein [Stenotrophomonas maltophilia
K279a]
Length = 231
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 4/176 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ E+++ L + + G D+ E + + +TGI V R G
Sbjct: 56 VAAGLLTG--DSATERRQHALIGAGIGALSGAAVGQYQDRQERALRERTANTGIDVQRQG 113
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D I +P ++F + L+ +F L +A L + T+I + HTDSIG+ N
Sbjct: 114 DNIMLNLPDGITFDFGKSTLKPQFYGALNGVAGTLRDYNQTMIEVVGHTDSIGSDAVNNR 173
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ERAD + YLI + + I G YPI N T GR N+R+EI++ P
Sbjct: 174 LSKERADSVAQYLIGQ-GVQSVRIETLGAGKSYPIADNSTDAGRAKNRRVEIRVIP 228
>gi|110633615|ref|YP_673823.1| OmpA/MotB [Mesorhizobium sp. BNC1]
gi|110284599|gb|ABG62658.1| OmpA/MotB [Chelativorans sp. BNC1]
Length = 217
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 31/214 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLAS-----------------------------REKKKVFLH 31
M+K + + ++GC ++ L
Sbjct: 1 MLKRVIAAAIAGALVTGCTTDPYTGQQKMSNAAGGAALGALAGAGLGLLAGGNDRRNALL 60
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEK 90
+ + G +D+ E + + QLQ TG+ V+R GD I +P +++F ++
Sbjct: 61 GAGIGALAGGGIGLYMDQQEAQLRAQLQGTGVSVTRQGDYIILNMPSNITFATDSADIQP 120
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
F L +A +L ++ T++ + HTDS G+L++N+ +SQ RA + YLI + + +R
Sbjct: 121 AFYQTLNSVALVLKRYNQTLVDVYGHTDSTGSLQHNMQLSQRRAASVADYLIAQ-GTDSR 179
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+V G PI +N T GR N+R+EI++ P
Sbjct: 180 RFAVIGQGPSQPIASNATPEGRAQNRRVEIRLAP 213
>gi|253582681|ref|ZP_04859902.1| outer membrane protein [Fusobacterium varium ATCC 27725]
gi|251835551|gb|EES64091.1| outer membrane protein [Fusobacterium varium ATCC 27725]
Length = 216
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 31/212 (14%)
Query: 3 KELGLSMFIMTTISGCGLAS-----------------------------REKKKVFLHKS 33
K+ S + I+GC + + K L +
Sbjct: 4 KKAMSSFLLALMITGCTSSPFLDETGSVNSKTKGTAGGAAAGALIGQLIGKDTKGTLIGA 63
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKF 92
+ +G+ D+ E E + +L++T + VS+ GD + +P V+F + F
Sbjct: 64 GVGALAGLGWGAYRDRQEQELRERLKNTEVQVSQKGDNLNLNLPGGVTFATDSSNIVPSF 123
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L IAT+L ++P T I + +TD++G+ N+ +S++RA +++YLIQ+ S R I
Sbjct: 124 YGPLNSIATVLVQYPETRIIVNGYTDNVGSASYNITLSEKRAASVRNYLIQQ-GVSARRI 182
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S G+ + P TN T GR N+R+E++I P
Sbjct: 183 SYVGYGMENPRATNSTAAGRAENRRVELEILP 214
>gi|254524462|ref|ZP_05136517.1| outer membrane protein [Stenotrophomonas sp. SKA14]
gi|219722053|gb|EED40578.1| outer membrane protein [Stenotrophomonas sp. SKA14]
Length = 231
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 4/176 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ E+++ L + + G D+ E + + +TGI V R G
Sbjct: 56 VAAGLLTG--DSATERRQHALIGAGIGALSGAAVGQYQDRQERALRERTANTGIDVQRQG 113
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D I +P ++F + L+ +F L +A L + T+I + HTDSIG+ N
Sbjct: 114 DNIMLNLPDGITFDFGKATLKPQFYGSLNGVAGTLRDYNQTMIEVVGHTDSIGSDAVNNR 173
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ERAD + YLI + + I G YPI N T GR N+R+EI++ P
Sbjct: 174 LSKERADSVAQYLIGQ-GVQSVRIETLGAGKSYPIADNSTDAGRAKNRRVEIRVIP 228
>gi|254483376|ref|ZP_05096606.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
gi|214036360|gb|EEB77037.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
Length = 214
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+ K + + IV G+ +D E + + +LQ TG+ V R GD I +P +++F
Sbjct: 51 DSGKHARNAALGCGIVGAGVGAYMDVQEAKLKEELQGTGVQVVREGDNIRLIMPGNITFE 110
Query: 84 -SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L F +L + +L+K+ T + + HTD+ G+ + N +S+ RA + YL
Sbjct: 111 TDSYNLRSSFYSVLNSVGQVLSKYADTTLRVSGHTDNTGSRQYNQTLSERRAGSVADYLA 170
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
R V R + V+G + PI N + GR N+R+E+ I P
Sbjct: 171 TREVDRARML-VQGMGFDQPIADNGSAAGRAQNRRVELYILPN 212
>gi|197106951|ref|YP_002132328.1| OmpA family protein [Phenylobacterium zucineum HLK1]
gi|196480371|gb|ACG79899.1| OmpA family protein [Phenylobacterium zucineum HLK1]
Length = 221
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLA----------------------------------SREKK 26
M ++ + + C S E +
Sbjct: 1 MKTKIAALGLSLLAVGACTTTDPYTGQTVRSNTRTGILAGAAGGALLGYLTNTNKSEEGR 60
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSE 85
L + + G+ +D+ + E + +L +G+ V R GD I +P V+F V +
Sbjct: 61 TNALIGAGVGALAGGAVGAYMDRQQAELRRELAGSGVEVERRGDDIVLNMPSDVTFGVDQ 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
++ +F P+L IA L+++P T+I + H DS G N +S+ RA + SYL+ RG
Sbjct: 121 SDVQSRFYPVLDDIAATLSRYPQTLIDVAGHADSTGADAYNQALSERRASSVASYLVSRG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V +R + V G+ P+ +N T+ GR N+R+EI + P
Sbjct: 181 VLQDR-LYVVGYGESRPVASNATEQGRAQNRRVEITVRP 218
>gi|194365341|ref|YP_002027951.1| OmpA/MotB domain-containing protein [Stenotrophomonas maltophilia
R551-3]
gi|194348145|gb|ACF51268.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
Length = 231
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 4/176 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ E+++ L + + G D+ E + + +TGI V R G
Sbjct: 56 VAAGLLTG--DSATERRQHALIGAGIGALSGAAVGQYQDRQERALRERTANTGIDVQRQG 113
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D I +P ++F + L+ +F L +A L + T+I + HTDSIG+ N
Sbjct: 114 DNIMLNLPDGITFDFGKATLKPQFYGSLNGVAGTLRDYNQTMIEVVGHTDSIGSDAVNNR 173
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ERAD + YL+ + + I G YPI N T GR N+R+EI++ P
Sbjct: 174 LSKERADSVAQYLVGQ-GVQSVRIETLGAGKSYPIADNSTDAGRAKNRRVEIRVIP 228
>gi|315127968|ref|YP_004069971.1| lipoprotein [Pseudoalteromonas sp. SM9913]
gi|315016482|gb|ADT69820.1| lipoprotein [Pseudoalteromonas sp. SM9913]
Length = 210
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 3 KELGLSMFIMTTISGCGL--------------------ASREKKKVFLHKSNDTDIVNKR 42
K L + +SGC + K K + +
Sbjct: 5 KSLLSVTVVAVLLSGCEMNNTGKGAAIGAAAGGILGKATGNHKDKRIFIGAAIGALAGAA 64
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIAT 101
G +DK E F+ +L +G+ V R GD + +P +++F + ++ F L IA+
Sbjct: 65 VGDYMDKQEAAFRDELAGSGVEVVREGDNLRLVMPSNITFATDQSYISSGFHDTLNAIAS 124
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
++NK+ T ++++ HTDS G N+ +S++RA +K+YL+ + + + R +S G+
Sbjct: 125 VMNKYEKTYLSVEGHTDSTGKDSYNMTLSEQRAQSVKNYLVNQQIMAAR-VSTSGYGESR 183
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
PI TNDT GR N+R+EIQI P
Sbjct: 184 PIATNDTANGRAQNRRVEIQIVPN 207
>gi|197364467|ref|YP_002144104.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197095944|emb|CAR61525.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 205
Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
G+ + I + +++ K L + + G +D E + + +++ TG+ V
Sbjct: 29 GIGSLVGAGIGALSSSKKDRGKGALIGAA----LGGGVGYYMDVQEAKLRDKMRGTGVSV 84
Query: 66 SRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L +A +L ++P T + + +TDS G+
Sbjct: 85 TRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGSHD 144
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RAD + S LI +GV ++R I G PI +N T G+ N+R+EI + P
Sbjct: 145 LNMRLSQQRADSVASSLITQGVDASR-IRTSGMGPANPIASNSTAEGKAQNRRVEITLSP 203
>gi|58581150|ref|YP_200166.1| OmpA family protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84623073|ref|YP_450445.1| OmpA family protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58425744|gb|AAW74781.1| OmpA family protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84367013|dbj|BAE68171.1| OmpA family protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 241
Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ E+++ + + + G D+ E + + +TGI V R G
Sbjct: 56 VAAGLLTG--DSATERRQHAMIGAGIGALSGAAIGQYQDRQERALRERTANTGIEVQRQG 113
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D I+ +P ++F + L+ +F L +A+ L ++ T++ + HTDS+G+ N
Sbjct: 114 DNISLNLPDGITFDFGKSALKPEFYTALNGVASTLREYNQTMVEVVGHTDSVGSDAANQR 173
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ERA + YL +GV R G +YPI N+T GR N+R+EI++ P
Sbjct: 174 LSEERAGAVAQYLTAQGVQRERM-ETMGAGKRYPIADNNTDAGRAKNRRVEIRLIP 228
>gi|325923199|ref|ZP_08184883.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas gardneri ATCC 19865]
gi|325546323|gb|EGD17493.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas gardneri ATCC 19865]
Length = 249
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ E+++ + + + G D+ E + + +TGI V R G
Sbjct: 64 VAAGLLTG--DSATERRQHAMVGAGIGALSGAAVGQYQDRQERALRERTANTGIEVQRQG 121
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D IT +P ++F + L+ +F L +A+ L ++ T++ + HTDS+G+ N
Sbjct: 122 DNITLNLPDGITFDFGKSALKPQFYSALNGVASTLREYNQTMVEVVGHTDSVGSDAVNQR 181
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ERA + YL +GV R G +YPI N+T GR N+R+EI++ P
Sbjct: 182 LSEERAGAVAQYLTAQGVQRERM-ETMGAGKRYPIADNNTDAGRAQNRRVEIRLIP 236
>gi|84685261|ref|ZP_01013160.1| OmpA family protein [Maritimibacter alkaliphilus HTCC2654]
gi|84666993|gb|EAQ13464.1| OmpA family protein [Rhodobacterales bacterium HTCC2654]
Length = 225
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 79/205 (38%), Gaps = 24/205 (11%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF--------------------- 43
L + + ++GC + + + +V
Sbjct: 22 FVLPLVSVLALTGCSTVGQREGAGIATGAAVGGLVGAAIPGNRAATAAAGAIGGAIVGGL 81
Query: 44 -GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIAT 101
G+ LDK + + L ++ I V G + +P + F + P L+ +A
Sbjct: 82 VGNQLDKQAGDLRSSLSNSSIQVINTGSYLKVVMPQGILFPTDSADVSPALYPDLRALAE 141
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
L ++P++ + + HTD+ G NL +SQ RA + +IQ + G
Sbjct: 142 NLREYPNSSVQVVGHTDNTGQASYNLTLSQRRAQAVL-GVIQSNGVGAARLQAVGKGDSE 200
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRG 186
P+ TN T GR N+R+E+ I PRG
Sbjct: 201 PVATNLTPEGRAQNRRVEVLIIPRG 225
>gi|21230892|ref|NP_636809.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66769109|ref|YP_243871.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
8004]
gi|188992257|ref|YP_001904267.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
campestris str. B100]
gi|21112502|gb|AAM40733.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66574441|gb|AAY49851.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
8004]
gi|167734017|emb|CAP52223.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
campestris]
Length = 241
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ E+++ + + + G D+ E + + +TGI V R G
Sbjct: 56 VAAGLLTG--DSATERRQHAMIGAGIGALSGAAVGQYQDRQERALRERTANTGIDVQRQG 113
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D IT +P ++F + L+ +F L +A+ L ++ T++ + HTDS+G+ N
Sbjct: 114 DNITLNLPDGITFDFGKSALKPQFYTALNGVASTLREYNQTMVEVVGHTDSVGSDAVNQR 173
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ERA+ + YL +GV R G +YPI N T GR N+R+EI++ P
Sbjct: 174 LSEERANAVAQYLTAQGVQRERM-ETMGAGKRYPIADNSTDAGRAQNRRVEIRLIP 228
>gi|213963523|ref|ZP_03391776.1| inner membrane lipoprotein YiaD [Capnocytophaga sputigena Capno]
gi|213953803|gb|EEB65132.1| inner membrane lipoprotein YiaD [Capnocytophaga sputigena Capno]
Length = 229
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 89/223 (39%), Gaps = 37/223 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKK------------------------------VFL 30
M K + L++ ++GC + K +
Sbjct: 1 MKKFVVLALSAAVLLTGCEAYNNTNKAQRGAVVGAAGGALLGAILGNNVGNGQNSELGAV 60
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH----VSFVSEV 86
+ G +DK + + ++ G V R+ D I + ++
Sbjct: 61 LGTVVGGAAGAVIGHQMDKQAKKIEEEIP--GADVKRVDDGIVVTFDENNGGVYFDTNKY 118
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ +K L +A IL ++P T + + HTDS+G + NL +SQ RA + +Y +G+
Sbjct: 119 NINEKSKQTLDKLAAILKEYPDTNVLVAGHTDSVGKDEYNLGLSQRRAQAVTNYFKSKGL 178
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ +R + + + K PI +NDT GR N+R+ + I P +K
Sbjct: 179 AGSR-FTTKWYGEKNPIASNDTAEGRAKNRRVNVVIVPNEKMK 220
>gi|319787272|ref|YP_004146747.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
gi|317465784|gb|ADV27516.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
Length = 226
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 103/176 (58%), Gaps = 4/176 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ E+++ L + + G+ D+ ++ + +LQ TG+ V+R G
Sbjct: 51 VAAGLLTG--NSAVERRQHALIGAGIGGLAGGSVGAYQDRQQNALRAKLQGTGVSVTRNG 108
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D IT +P +V+F + L+ +F P+L +A +L ++ TV+ + HTDS+G + N
Sbjct: 109 DNITLNMPGNVTFGFNSANLDPQFYPVLSSVAEVLREYDKTVVEVAGHTDSVGGDEVNQR 168
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S++RA+ + +L+ + ++ RFI+V G +YPI +NDT+ GR N+R+EI + P
Sbjct: 169 LSEQRANAVTQFLVSQNINPQRFITV-GAGKRYPIASNDTEAGRAANRRVEITLVP 223
>gi|13470497|ref|NP_102066.1| hypothetical protein mlr0220 [Mesorhizobium loti MAFF303099]
gi|14021239|dbj|BAB47852.1| mlr0220 [Mesorhizobium loti MAFF303099]
Length = 216
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLAS------------------------------REKKKVFL 30
M K + +++ +S C ++ L
Sbjct: 1 MKKTVLVAVATALLVSACTTTDPYTGDQKISNTAAGAGLGALAGASLGLLAGGNDRRNAL 60
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLE 89
+ + G+++D+ E E + QL+ TG+ V+R GD I +P ++F + ++
Sbjct: 61 IGAGIGALAGGAIGATMDQNEAELRRQLEGTGVSVTRSGDQIILNMPSDITFNVDQDAVK 120
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
F P+L +A +L KF T + + HTDS G ++N +SQ RA + + +
Sbjct: 121 PGFYPVLNSVALVLKKFKQTTVDVFGHTDSTGGDQHNFDLSQRRALAVAN-YLSGQGVDQ 179
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +V GF PI +N T GR+ N+R+EIQ+ P
Sbjct: 180 RRFAVTGFGKTRPIASNATAAGREQNRRVEIQLSP 214
>gi|188575664|ref|YP_001912593.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520116|gb|ACD58061.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 241
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ E+++ + + + G D+ E + + +TGI V R G
Sbjct: 56 VAAGLLTG--DSATERRQHAMIGAGIGALSGAAIGQYQDRQERALRERTANTGIEVQRQG 113
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D I+ +P ++F + L+ +F L +A+ L ++ T++ + HTDS+G+ N
Sbjct: 114 DNISLNLPDGITFDFGKSALKPEFYTALNGVASTLREYNQTMVEVVGHTDSVGSDAANQR 173
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ERA + YL +GV R G +YPI N+T GR N+R+EI++ P
Sbjct: 174 LSEERAGAVAQYLTAQGVQRERM-ETMGAGKRYPIADNNTDAGRAKNRRVEIRLIP 228
>gi|163740474|ref|ZP_02147868.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
gi|161386332|gb|EDQ10707.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
Length = 216
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L ++ G ++ + + G+ LD E E + + + GI +
Sbjct: 35 ALIGGLIGAGVGAAANDSDRGLGAVTGALVGAAAGSVIGNQLDAQERELRQSISNDGISI 94
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
GD + +P ++F + L +A+ L ++P++ + + HTDS G
Sbjct: 95 VNTGDRLIVSLPNDLTFATDSAAVSPAVRSDLNKVASSLVRYPNSQVQVIGHTDSDGDAG 154
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +S+ RA+ + + GV NR + + G P+ +N T G+ N+R+EI + P
Sbjct: 155 YNQGLSERRANAVADQIQAGGVPYNR-VQIIGRGESQPVASNLTAEGKARNRRVEIVVIP 213
Query: 185 RG 186
+G
Sbjct: 214 QG 215
>gi|294787848|ref|ZP_06753092.1| OmpA family protein [Simonsiella muelleri ATCC 29453]
gi|294484141|gb|EFG31824.1| OmpA family protein [Simonsiella muelleri ATCC 29453]
Length = 217
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 62/216 (28%), Positives = 92/216 (42%), Gaps = 30/216 (13%)
Query: 1 MIKELGLSM-FIMTTISGC---GLASREKK------------------------KVFLHK 32
M+K++ L+ +SGC ++ K +
Sbjct: 3 MMKQITLATTLAALGLSGCVTNATTGEKQASKTAVYGMGAAVTCGIIGAITHGSKGARNS 62
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKK 91
+ + G +D E + + QL DTG+ V R G+ I +P +V+F L
Sbjct: 63 AAACGALGMGVGGYMDYQEKKLREQLADTGVEVQREGNQIKLTMPENVTFATGRYDLSVN 122
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L A L + T I+I HTDS G N+ +SQ RA+ + YLI +GVSS+R
Sbjct: 123 AQNSLNGAAQTLATYNETTISIIGHTDSTGNDSINIPLSQNRANAVAQYLISKGVSSSR- 181
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
IS G PI +N T GR N+R+EI I P+
Sbjct: 182 ISTAGHGASQPIASNSTAEGRAQNRRVEILINPQAK 217
>gi|289670151|ref|ZP_06491226.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 241
Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ E+++ + + + G D+ E + + +TGI V R G
Sbjct: 56 VAAGLLTG--DSATERRQHAMVGAGIGALSGAAIGQYQDRQERALRERTANTGIEVQRQG 113
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D I+ +P ++F + L+ +F L +A+ L ++ T++ + HTDS+G+ N
Sbjct: 114 DNISLNLPDGITFDFGKSALKPEFYTALNGVASTLREYNQTMVEVVGHTDSVGSDAVNQR 173
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ERA + YL +GV R G +YPI N+T GR N+R+EI++ P
Sbjct: 174 LSEERAGAVAQYLTAQGVQRERM-ETMGAGKRYPIADNNTDAGRAKNRRVEIRLIP 228
>gi|260460699|ref|ZP_05808949.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
gi|259033276|gb|EEW34537.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
Length = 216
Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 32/215 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLAS------------------------------REKKKVFL 30
M K + + + +S C ++ L
Sbjct: 1 MKKTVLVVVATALLVSACTTTDPYTGDQKISNTAAGAGLGALAGASLGLLAGGNDRRNAL 60
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLE 89
+ + G+++D+ E E + QL+ TG+ V+R GD I +P ++F + ++
Sbjct: 61 IGAGIGALAGGAIGATMDQNEAELRRQLEGTGVSVTRSGDQIILNMPSDITFNSDQDAVK 120
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
F +L +A +L KF T + + HTDS G ++N +SQ RA + +YL +
Sbjct: 121 PGFYQVLNSVALVLKKFKQTTVDVFGHTDSTGGDQHNFDLSQRRALAVANYLAGQ-GVDQ 179
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +V GF P+ +N T GR N+R+EIQ+ P
Sbjct: 180 RRFAVTGFGKTRPVASNATSEGRAQNRRVEIQLSP 214
>gi|56415540|ref|YP_152615.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|56129797|gb|AAV79303.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
Length = 216
Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
G+ + I + +++ K L + + G +D E + + +++ TG+ V
Sbjct: 40 GIGSLVGAGIGALSSSKKDRGKGALIGAA----LGGGVGYYMDVQEAKLRDKMRGTGVSV 95
Query: 66 SRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L +A +L ++P T + + +TDS G+
Sbjct: 96 TRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGSHD 155
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RAD + S LI +GV ++R I G PI +N T G+ N+R+EI + P
Sbjct: 156 LNMRLSQQRADSVASSLITQGVDASR-IRTSGMGPANPIASNSTAEGKAQNRRVEITLSP 214
>gi|257470656|ref|ZP_05634746.1| Outer membrane protein [Fusobacterium ulcerans ATCC 49185]
Length = 217
Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 3 KELGLSMFIMTTISGCGLAS-----------------------------REKKKVFLHKS 33
K+ S+ + I+GC + + K L +
Sbjct: 4 KKAMSSLLLALIITGCTSSPFLDETGSVSGKTKGTAGGAAAGALIGQLIGKDTKGTLIGA 63
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKF 92
+ +G+ D+ E E + +L++T + VS+ GD + +P V+F + F
Sbjct: 64 GVGALAGLGWGAYRDRQEQELRERLKNTEVQVSQNGDNLNLNLPGGVTFATDSSNIVSSF 123
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L IAT+L ++P T I + +TD++G+ N+ +S+ RA +++YLIQ+ S R I
Sbjct: 124 YGPLNSIATVLVQYPETRIIVNGYTDNVGSASYNVSLSERRAASVRNYLIQQ-GVSARRI 182
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
S G+ + P TN T GR N+R+E++I P N
Sbjct: 183 SYVGYGMENPRATNSTAAGRAENRRVELEILPMSN 217
>gi|166712665|ref|ZP_02243872.1| OmpA family protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 241
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ E+++ + + + G D+ E + + +TGI V R G
Sbjct: 56 VAAGLLTG--DSATERRQHAMVGAGIGALSGAAIGQYQDRQERALRERTANTGIEVQRQG 113
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D I+ +P ++F + L+ +F L +A+ L ++ T++ + HTDS+G+ N
Sbjct: 114 DNISLNLPDGITFDFGKSALKPEFYTALNGVASTLREYNQTMVEVVGHTDSVGSDAANQR 173
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ERA + YL +GV R G +YPI N+T GR N+R+EI++ P
Sbjct: 174 LSEERAGAVAQYLTAQGVQRERM-ETMGAGKRYPIADNNTDAGRAKNRRVEIRLIP 228
>gi|222086409|ref|YP_002544943.1| outer membrane lipoprotein [Agrobacterium radiobacter K84]
gi|221723857|gb|ACM27013.1| outer membrane lipoprotein [Agrobacterium radiobacter K84]
Length = 222
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLAS---------------------------------REKKK 27
MIK++ + ++ C ++
Sbjct: 1 MIKKIAILAISAAFLNACTTTDPYTGEQKVSNTAGGAALGAGVGAVAGLLIGHSPASRRN 60
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV 86
L + + G+ +D+ E E + QLQ TG+ V+R+GD I +P ++F
Sbjct: 61 AALIGAGVGALAGAGIGNYMDQQESELRAQLQGTGVSVTRVGDRIILNMPSAITFDIDRD 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
++ +F L +A +L KF T+I + HTDS G+L++N +S+ RA + S +
Sbjct: 121 EIKPEFFATLNSVAIVLRKFNRTLIDVNGHTDSTGSLQHNQDLSERRAGSVAS-YLGSQG 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +S GF P+ +N + GR N+R+EIQI P
Sbjct: 180 IDQRRVSAVGFGPTQPVASNANESGRAQNRRVEIQIAP 217
>gi|317059511|ref|ZP_07923996.1| outer membrane protein [Fusobacterium sp. 3_1_5R]
gi|313685187|gb|EFS22022.1| outer membrane protein [Fusobacterium sp. 3_1_5R]
Length = 204
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + + +G+ D+ E + L++T + V R G+ I+ Y+P V+F
Sbjct: 40 GKDTKGTLIGAGMGALAGLGWGAYRDQQEAALRASLKNTAVQVQRDGENISLYLPGGVTF 99
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L IA +L ++P T I +Q HTDS G+ ++N+ +S RA+ +K YL
Sbjct: 100 ASDSAQISGNFYSALNSIAQVLVQYPETQILVQGHTDSTGSFQHNMDLSNRRANSVKHYL 159
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
I +GV+SNR +S +GF P+ N T GRQ N+R+EI+I P+ N
Sbjct: 160 IGQGVASNRLMS-QGFGPNNPVADNSTPDGRQMNRRVEIKIAPKYN 204
>gi|163737113|ref|ZP_02144531.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
gi|161389717|gb|EDQ14068.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
Length = 219
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L ++ G ++ + + G+ LD E E + + + GI +
Sbjct: 38 ALIGGLIGAGVGAAANDSDRGLGAVTGALVGAAAGSVIGNQLDAQERELRQSISNDGISI 97
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
GD + +P ++F + L +A+ L ++P++ + + HTDS G
Sbjct: 98 VNTGDRLIVSLPNDLTFATDSAAVSPAVRSDLNKVASSLVRYPNSQVQVIGHTDSDGDAG 157
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +S+ RA+ + + GV NR + + G P+ +N T G+ N+R+EI + P
Sbjct: 158 YNQGLSERRANAVADQIQAGGVPYNR-VQIIGRGESQPVASNLTAEGKARNRRVEIVVIP 216
Query: 185 RG 186
+G
Sbjct: 217 QG 218
>gi|257452971|ref|ZP_05618270.1| Outer membrane protein [Fusobacterium sp. 3_1_5R]
Length = 217
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + + +G+ D+ E + L++T + V R G+ I+ Y+P V+F
Sbjct: 53 GKDTKGTLIGAGMGALAGLGWGAYRDQQEAALRASLKNTAVQVQRDGENISLYLPGGVTF 112
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L IA +L ++P T I +Q HTDS G+ ++N+ +S RA+ +K YL
Sbjct: 113 ASDSAQISGNFYSALNSIAQVLVQYPETQILVQGHTDSTGSFQHNMDLSNRRANSVKHYL 172
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
I +GV+SNR +S +GF P+ N T GRQ N+R+EI+I P+ N
Sbjct: 173 IGQGVASNRLMS-QGFGPNNPVADNSTPDGRQMNRRVEIKIAPKYN 217
>gi|21242231|ref|NP_641813.1| OmpA family protein [Xanthomonas axonopodis pv. citri str. 306]
gi|21107654|gb|AAM36349.1| OmpA family protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 241
Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ E+++ + + + G D+ E + + +TGI V R G
Sbjct: 56 VAAGLLTG--DSATERRQHAMVGAGIGALSGAAIGQYQDRQERALRERTANTGIEVQRQG 113
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D IT +P ++F + L+ +F L +A+ L ++ T++ + HTDS+G+ N
Sbjct: 114 DNITLNLPDGITFDFGKSALKPQFYSALNGVASTLREYNQTMVEVVGHTDSVGSDAVNQR 173
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ERA + YL +GV R G +YPI N T GR N+R+EI++ P
Sbjct: 174 LSEERAGAVAQYLTAQGVQRERM-ETMGAGKRYPIADNSTDAGRAQNRRVEIRLIP 228
>gi|317060136|ref|ZP_07924621.1| outer membrane protein [Fusobacterium sp. D12]
gi|313685812|gb|EFS22647.1| outer membrane protein [Fusobacterium sp. D12]
Length = 193
Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 2/166 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + + +G+ D+ E + L++T + V R G+ I+ Y+P V+F
Sbjct: 29 GKDTKGTLIGAGVGALAGLGWGAYRDQQEAALRASLKNTAVQVQRDGENISLYLPGGVTF 88
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L IA +L ++P T I +Q HTDS G+ ++N+ +S RA+ +K YL
Sbjct: 89 ASDSAQISGNFYSALNSIAQVLVQYPETQILVQGHTDSTGSFQHNMDLSNRRANSVKQYL 148
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
I + ++ ++ +GF P+ N T GRQ N+R+EI+I P+ N
Sbjct: 149 IGQ-GVASNRLTSQGFGPNNPVADNSTPEGRQMNRRVEIKIAPKYN 193
>gi|78047093|ref|YP_363268.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|294626580|ref|ZP_06705178.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294665669|ref|ZP_06730945.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|78035523|emb|CAJ23169.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|292599147|gb|EFF43286.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292604564|gb|EFF47939.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 241
Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ E+++ + + + G D+ E + + +TGI V R G
Sbjct: 56 VAAGLLTG--DSATERRQHAMVGAGIGALSGAAIGQYQDRQERALRERTANTGIEVQRQG 113
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D I+ +P ++F + L+ +F L +A+ L ++ T++ + HTDS+G+ N
Sbjct: 114 DNISLNLPDGITFDFGKSALKPQFYTALNGVASTLREYNQTMVEVVGHTDSVGSDAVNQR 173
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ERA + YL +GV R G +YPI N T GR N+R+EI++ P
Sbjct: 174 LSEERASAVAQYLTAQGVQRERM-ETMGAGKRYPIADNTTDAGRAKNRRVEIRLIP 228
>gi|325914015|ref|ZP_08176371.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas vesicatoria ATCC 35937]
gi|325539784|gb|EGD11424.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas vesicatoria ATCC 35937]
Length = 241
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ E+++ + + + G D+ E + + +TGI V R G
Sbjct: 56 VAAGLLTG--DSATERRQHAMVGAGIGALSGAAVGQYQDRQERALRERTANTGIDVQRQG 113
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D IT +P ++F + L+ +F L +A+ L ++ T++ + HTDS+G+ N
Sbjct: 114 DNITLNLPDGITFDFGKSALKPQFYSALNGVASTLREYNQTMVEVVGHTDSVGSDAVNQR 173
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ERA + YL +GV R G +YPI N T GR N+R+EI++ P
Sbjct: 174 LSEERAGAVAQYLTAQGVQRERM-ETMGAGKRYPIADNSTDAGRAQNRRVEIRLIP 228
>gi|315917803|ref|ZP_07914043.1| outer membrane protein [Fusobacterium gonidiaformans ATCC 25563]
gi|313691678|gb|EFS28513.1| outer membrane protein [Fusobacterium gonidiaformans ATCC 25563]
Length = 204
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + + +G+ D+ E + L++T + V R G+ I+ Y+P V+F
Sbjct: 40 GKDTKGTLIGAGVGALAGLGWGAYRDQQEAALRASLKNTAVQVQRDGENISLYLPGGVTF 99
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L IA +L ++P T I +Q HTD+ G+ ++N+ +S RA+ +K YL
Sbjct: 100 ASDSAQISGNFYSALNSIAQVLVQYPETQILVQGHTDNTGSFQHNMDLSNRRANSVKQYL 159
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
I +GV+SNR +S +GF P+ N T GRQ N+R+EI+I P+ N
Sbjct: 160 IGQGVASNRLMS-QGFGPNNPVADNSTPDGRQMNRRVEIKIAPKYN 204
>gi|289662994|ref|ZP_06484575.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 241
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 4/176 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ E+++ + + + G D+ E + + +TGI V R G
Sbjct: 56 VAAGLLTG--DSATERRQHAMVGAGIGALSGAAIGQYQDRQERALRERTANTGIEVQRQG 113
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D I+ +P ++F + L+ +F L +A+ L ++ T++ + HTDS+G+ N
Sbjct: 114 DNISLNLPDGITFDFGKSALKPEFYTALNGVASTLREYNQTMVEVVGHTDSVGSDAVNQR 173
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ERA + YL +GV R + G +YPI N+T GR N+R+EI++ P
Sbjct: 174 LSEERAGAVAQYLTAQGVQRERMDT-MGAGKRYPIADNNTDAGRAKNRRVEIRLIP 228
>gi|296329053|ref|ZP_06871559.1| proteobacterial sortase system OmpA family protein [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296153857|gb|EFG94669.1| proteobacterial sortase system OmpA family protein [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 208
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 23/204 (11%)
Query: 3 KELGLSMFIMTTISGCG---------------------LASREKKKVFLHKSNDTDIVNK 41
K++ S + ++ C + K L + ++
Sbjct: 4 KKIIASCMLALSLVSCTGLEAGNGAYTAGGAALGAVAGQVIGKDTKGTLIGAAVGSLLGM 63
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIA 100
+G+ D E E + +LQ T V + G+ + +P V+F + F L IA
Sbjct: 64 GWGAYRDNQERELKAKLQGTQAQVRKDGNALVINLPGGVTFASDSANITSGFYSALNGIA 123
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
LN +P T I + +TD+ G +N +SQ RA+ + YLI + S+ I GF
Sbjct: 124 QSLNNYPETRIQVNGYTDNTGKDAHNQELSQRRANAVAQYLIAQ-GVSSNRIVANGFGSS 182
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFP 184
PI +N T GR N+R+EI+I P
Sbjct: 183 NPIASNSTPEGRLQNRRVEIKILP 206
>gi|257466649|ref|ZP_05630960.1| Outer membrane protein [Fusobacterium gonidiaformans ATCC 25563]
Length = 217
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + + +G+ D+ E + L++T + V R G+ I+ Y+P V+F
Sbjct: 53 GKDTKGTLIGAGVGALAGLGWGAYRDQQEAALRASLKNTAVQVQRDGENISLYLPGGVTF 112
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L IA +L ++P T I +Q HTD+ G+ ++N+ +S RA+ +K YL
Sbjct: 113 ASDSAQISGNFYSALNSIAQVLVQYPETQILVQGHTDNTGSFQHNMDLSNRRANSVKQYL 172
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
I +GV+SNR +S +GF P+ N T GRQ N+R+EI+I P+ N
Sbjct: 173 IGQGVASNRLMS-QGFGPNNPVADNSTPDGRQMNRRVEIKIAPKYN 217
>gi|227824113|ref|YP_002828086.1| putative outer membrane protein, OmpA/MotB domain protein
[Sinorhizobium fredii NGR234]
gi|227343115|gb|ACP27333.1| putative outer membrane protein, OmpA/MotB domain protein
[Sinorhizobium fredii NGR234]
Length = 221
Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLA---------------------------------SREKKK 27
MIK+ + +SGC S ++
Sbjct: 1 MIKKCAILAVAAVYLSGCTTTDPYTGEQKMSNTAGGALIGAGLGAATGLLVGGSSAGRRD 60
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-V 86
L + + G+ +D+ E E + QLQ TGI V+R GD I +P +++F ++
Sbjct: 61 AALVGAGIGALGGGLIGNYMDQQESELRAQLQGTGISVTRQGDRIILNMPSNITFATDRD 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ F P L +A +L K+ T+I + HTDS G+ +N +S+ RA + + +
Sbjct: 121 QVIPPFYPTLDSVAIVLRKYNKTLIDVDGHTDSTGSAAHNQDLSERRAASVAN-YLGSRG 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R IS G+ + P+ +N ++ GR N+R+EI I P
Sbjct: 180 IDQRRISTMGYGMERPVASNSSEAGRAQNRRVEISIAP 217
>gi|325294095|ref|YP_004279959.1| porin [Agrobacterium sp. H13-3]
gi|325061948|gb|ADY65639.1| porin [Agrobacterium sp. H13-3]
Length = 220
Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 35/218 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG---------------- 44
MIK++ + T +S C + + + + G
Sbjct: 1 MIKKIAIVALCGTYLSACTTTDPYTGEQKMSNTAGGAGIGAVVGALGGLAVGGSPVGRRN 60
Query: 45 -----------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEV 86
+ +D E E + QLQ TG+ V+R GD I +P +++F +
Sbjct: 61 AALIGAGIGALAGGAIGNYMDGQESELRAQLQGTGVSVTRRGDSIVLNMPSNITFATDQD 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ F L +A +LNKF T+I I HTDS G+ ++N +S+ RA + + +
Sbjct: 121 QVIPPFYQTLDSVAIVLNKFNRTLIDINGHTDSTGSQQHNQALSERRAASVAN-YLGARG 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R IS GF PI +N T GR N+R+E+ I P
Sbjct: 180 VDQRRISTLGFGPSQPIASNATPDGRAQNRRVEVLISP 217
>gi|254475762|ref|ZP_05089148.1| OmpA/MotB [Ruegeria sp. R11]
gi|214030005|gb|EEB70840.1| OmpA/MotB [Ruegeria sp. R11]
Length = 219
Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
++ + G+ LD E E + + + GI + GD + +P
Sbjct: 53 TNDSDRGLGAATGAIVGAAAGSVIGNQLDAQERELRQSISNDGITIVNTGDRLIVSLPND 112
Query: 80 VSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++F + L +A L ++P++++ + HTDS G+ N +S+ RA+ +
Sbjct: 113 LTFATDSSAISPAVRSDLNKVAASLVRYPNSLVQVIGHTDSDGSASYNQALSERRANAVA 172
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ GV NR +++ G P+ +N T G+ N+R+EI + P+G
Sbjct: 173 DQIQAGGVPYNR-LAIIGRGEDQPVASNLTPEGKARNRRVEIVVIPQG 219
>gi|320173827|gb|EFW49008.1| putative outer membrane lipoprotein [Shigella dysenteriae CDC
74-1112]
Length = 195
Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 12/195 (6%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-------SSLDKA 50
M K + L + +SGC ++ + + + +D
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLDSLVGAALGGGVGYYMDVQ 60
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPST 109
E + + +++ TG+ V+R GD I +P +V+F S L+ L +A +L ++P T
Sbjct: 61 EAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKT 120
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ + +TDS G N+ +SQ+RAD + S LI +GV ++R I +G PI +N T
Sbjct: 121 AVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASR-IRTQGLGPANPIASNSTA 179
Query: 170 VGRQNNQRIEIQIFP 184
G+ N+R+EI + P
Sbjct: 180 EGKAQNRRVEITLSP 194
>gi|237744199|ref|ZP_04574680.1| outer membrane protein [Fusobacterium sp. 7_1]
gi|256027684|ref|ZP_05441518.1| Outer membrane protein [Fusobacterium sp. D11]
gi|260494220|ref|ZP_05814351.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33]
gi|289765644|ref|ZP_06525022.1| outer membrane protein [Fusobacterium sp. D11]
gi|229431428|gb|EEO41640.1| outer membrane protein [Fusobacterium sp. 7_1]
gi|260198366|gb|EEW95882.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33]
gi|289717199|gb|EFD81211.1| outer membrane protein [Fusobacterium sp. D11]
Length = 212
Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 3 KELGLSMFIMTTISGCGLAS-------------------------REKKKVFLHKSNDTD 37
K++ S + ++ GC + K L +
Sbjct: 4 KKIIASCMLALSLVGCTGFEAGNGGYTTGGAAGGAAVGALAGQIIGKDTKGTLIGAAVGS 63
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPML 96
+V +G+ D E E + +LQ T V + G+ + +P V+F + F L
Sbjct: 64 LVGMGWGAYRDNQERELKAKLQGTQAQVKKEGNALVINLPGGVTFASDSANISSGFYSAL 123
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
IA LN +P T I + +TD+ G +N +SQ RA+ + YLI +GVSS+R I G
Sbjct: 124 NGIAQSLNNYPETRIQVNGYTDNTGKDAHNQELSQRRANAVAQYLIAQGVSSSRII-ANG 182
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
F PI +N T GR N+R+EI+I P
Sbjct: 183 FGSSNPIASNSTPDGRLQNRRVEIKILP 210
>gi|19704600|ref|NP_604162.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19714896|gb|AAL95461.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 202
Score = 137 bits (344), Expect = 9e-31, Method: Composition-based stats.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 2/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + ++ +G+ D E E + +LQ T V + G+ + +P V+F
Sbjct: 39 GKDTKGTLIGAAVGSLLGMGWGAYRDNQERELKAKLQGTQAQVRKDGNALVINLPGGVTF 98
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L IA LN +P T I + +TD+ G +N +SQ RA+ + YL
Sbjct: 99 ASDSANITSGFYSALNGIAQSLNNYPETRIQVNGYTDNTGKDAHNQELSQRRANAVAQYL 158
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I + S+ I GF PI +N T GR N+R+EI+I P
Sbjct: 159 IAQ-GVSSNRIVANGFGSSNPIASNSTPEGRLQNRRVEIKILP 200
>gi|325928737|ref|ZP_08189907.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas perforans 91-118]
gi|325540905|gb|EGD12477.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas perforans 91-118]
Length = 229
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ E+++ + + + G D+ E + + +TGI V R G
Sbjct: 44 VAAGLLTG--DSATERRQHAMVGAGIGALSGAAIGQYQDRQERALRERTANTGIEVQRQG 101
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D I+ +P ++F + L+ +F L +A+ L ++ T++ + HTDS+G+ N
Sbjct: 102 DNISLNLPDGITFDFGKSALKPQFYTALNGVASTLREYNQTMVEVVGHTDSVGSDAVNQR 161
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ERA + YL +GV R G +YPI N T GR N+R+EI++ P
Sbjct: 162 LSEERASAVAQYLTAQGVQRERM-ETMGAGKRYPIADNTTDAGRAKNRRVEIRLIP 216
>gi|332533226|ref|ZP_08409093.1| putative lipoprotein [Pseudoalteromonas haloplanktis ANT/505]
gi|332037305|gb|EGI73760.1| putative lipoprotein [Pseudoalteromonas haloplanktis ANT/505]
Length = 210
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
Query: 3 KELGLSMFIMTTISGCGL--------------------ASREKKKVFLHKSNDTDIVNKR 42
K L + +SGC + S K K + +
Sbjct: 5 KSLLSVTVVAVLLSGCEMNNTGKGAAIGAAAGGVLGKATSNHKDKRIFIGAAIGALAGAA 64
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIAT 101
G+ +DK E+ F+ +L +G+ V R GD + +P +++F + ++ F L IA
Sbjct: 65 VGNYMDKQEEAFRDELAGSGVEVVREGDNLRLVMPSNITFATDQSYISSGFNDTLDAIAK 124
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
++NK+ T ++I+ HTDS G N+ +S+ERA +K+YL+ + + + R +S G+
Sbjct: 125 VMNKYEKTYLSIEGHTDSTGKDSYNMNLSRERAQSVKNYLVNQQIMAER-VSTMGYGETR 183
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
PI TND+ GR N+R+EIQI P
Sbjct: 184 PIATNDSANGRAQNRRVEIQIVPN 207
>gi|332085086|gb|EGI90266.1| inner membrane lipoprotein yiaD [Shigella boydii 5216-82]
Length = 238
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
GL + I + +++ K L + + G +D E + + +++ TG+ V
Sbjct: 59 GLGSLVGAGIGALSSSKKDRGKGALIGATAGAALGGGVGYYMDVQEAKLRDKMRGTGVSV 118
Query: 66 SRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L +A +L ++P T + + +TDS G
Sbjct: 119 TRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHD 178
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RAD + S LI +GV ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 179 LNMRLSQQRADSVASALITQGVDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 237
>gi|224824498|ref|ZP_03697605.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
gi|224602991|gb|EEG09167.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
Length = 218
Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 1 MIKE----LGLSMFIMTTISGCGLASREKK---------------------------KVF 29
M K L ++ + ++ C + + K
Sbjct: 1 MFKHSKTLLTAAVALSVGLAACTTNPQTGQSQMSKTAMYGLGAAAACGIAGAATHGSKGA 60
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFL 88
+ + IV G+ +D E + + +L +T + V R+GD I +P +++F + L
Sbjct: 61 RNAALGCGIVGAGVGAYMDYQEKQLRDKLANTQVGVDRVGDQIKLTMPDNITFAVNSAEL 120
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ L ++ +L ++P T I + HTD+ G + N +SQ RA + +L RGV+
Sbjct: 121 QPSVRTALTDVSNVLTQYPDTTITVAGHTDNTGNVAYNQTLSQRRAQSVAGFLQSRGVAG 180
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+R I+ G+ PI +N T GR N+R+EI I P+ +
Sbjct: 181 SR-INPVGYGQNQPIASNTTAEGRAKNRRVEILINPKAS 218
>gi|254302883|ref|ZP_04970241.1| possible outer membrane protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323075|gb|EDK88325.1| possible outer membrane protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 212
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 2/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + ++ +G+ D E E + +LQ T V + G+ + +P V+F
Sbjct: 49 GKDTKGTLIGAAVGSLLGMGWGAYRDNQEKELKAKLQGTQAEVKKDGNALVINLPGGVTF 108
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L IA LN +P T I + +TDS G +N +SQ RA+ + YL
Sbjct: 109 ASDSANITSSFYSALNGIAQSLNNYPETRIQVNGYTDSTGNDAHNQELSQRRANAVAQYL 168
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +GVSS+R + GF PI +N T+ GR N+R+EI+I P
Sbjct: 169 VAQGVSSSRIV-ANGFGSSNPIASNSTQEGRLQNRRVEIKILP 210
>gi|261378300|ref|ZP_05982873.1| OmpA family protein [Neisseria cinerea ATCC 14685]
gi|269145394|gb|EEZ71812.1| OmpA family protein [Neisseria cinerea ATCC 14685]
Length = 225
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 2/182 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + G A K + + + G +D E + L T +
Sbjct: 34 KTALYGLGGAAVCGIMGALTHGGKGARNSALVCGALGAGIGGYMDYQEQRLRQSLAGTQV 93
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V R G+ I +P +V+F L L A L ++P T + I HTD+ G+
Sbjct: 94 QVQRQGNQIKLVMPENVTFATGSAVLSDNAQFALNTAAQTLVQYPDTTLTINGHTDNTGS 153
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL RGV+++R ++V G+ P+ +N T GR N+R+EI I
Sbjct: 154 DAVNNPLSQHRAQTVAYYLQSRGVAASR-LAVYGYGSHMPVASNATAEGRAQNRRVEILI 212
Query: 183 FP 184
P
Sbjct: 213 NP 214
>gi|256822902|ref|YP_003146865.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069]
gi|256796441|gb|ACV27097.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069]
Length = 221
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 2 IKELGLSMFIMTTISGCGL----ASREKKKVFLHKSNDTDIVNKRFGS------------ 45
+K L ++ GC E+ + I G+
Sbjct: 8 MKTLTAAVVAGVMGVGCTTLNPYTGEEQTSKTVKYGAIGAITCGLIGATRDSKSARNAAL 67
Query: 46 -----------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFL 93
+D E E + +L TG+ V R G+ I +P ++F ++ ++ F
Sbjct: 68 GCGAIGAGIGAYMDSQEKELREELAGTGVGVQRDGEQIHLIMPGDITFQTDRYAIDSGFY 127
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
P+L ++ +L KF T + + TDS+G+ N +S++RA+ + SYL QR + +NR +
Sbjct: 128 PVLDSVSKVLYKFKDTNLEVAGFTDSVGSDSYNQELSEKRANSVASYLRQREIPNNR-LR 186
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V G+ +YP+ N+T+ GR N+R+E+ I P
Sbjct: 187 VVGYGERYPVAPNETEAGRSKNRRVELTITP 217
>gi|237742260|ref|ZP_04572741.1| outer membrane protein [Fusobacterium sp. 4_1_13]
gi|256845531|ref|ZP_05550989.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|294785172|ref|ZP_06750460.1| OmpA family protein [Fusobacterium sp. 3_1_27]
gi|229429908|gb|EEO40120.1| outer membrane protein [Fusobacterium sp. 4_1_13]
gi|256719090|gb|EEU32645.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|294486886|gb|EFG34248.1| OmpA family protein [Fusobacterium sp. 3_1_27]
Length = 212
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 3 KELGLSMFIMTTISGCGLAS-------------------------REKKKVFLHKSNDTD 37
K++ S + ++ GC + K L +
Sbjct: 4 KKIIASCMLALSLVGCTGFEAGNGGYTAGGAAGGAAVGALAGQIIGKDTKGTLIGAAVGS 63
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPML 96
++ +G+ D E E + +LQ T V + G+ + +P V+F + F L
Sbjct: 64 LLGMGWGAYRDNQERELKAKLQGTQAQVRKDGNALVINLPGGVTFASDSANISSGFYSAL 123
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
IA LN +P T I + +TD+ G +N +SQ RA+ + YLI + ++ I G
Sbjct: 124 NGIAQSLNNYPETRIQVNGYTDNTGKDAHNQELSQRRANAVAQYLIAQ-GVASNRIVANG 182
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
F P+ +N T+ GR N+R+EI+I P
Sbjct: 183 FGSSNPVASNSTQEGRLQNRRVEIKILP 210
>gi|269968226|ref|ZP_06182255.1| putative lipoprotein [Vibrio alginolyticus 40B]
gi|269827149|gb|EEZ81454.1| putative lipoprotein [Vibrio alginolyticus 40B]
Length = 281
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG----------------- 44
+K++ +++ ++ ++GC R+ +++N T
Sbjct: 60 LKKMPIALALVLALTGCQATQRQNATTGEYETNSTTQGALIGAIAGAAIGLATGDDAKER 119
Query: 45 -------------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVS 84
D+ E E + L ++G+ V R+G + + + + F S
Sbjct: 120 RQHALIGAAAGGATGAGVGYYFDQQEAELRRALLNSGVQVQRVGENQLLLRMENGIGFSS 179
Query: 85 EVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L+ L+ +A IL ++P T + I +TDS G+ N +S+ RA+ ++ +L+
Sbjct: 180 SSYQLDASIHNTLRGVARILVEYPDTSLVIDGYTDSTGSESYNQTLSERRAESVRQFLVS 239
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ V+ R I RG+ + PI +N T GR N+R+EIQI P
Sbjct: 240 QNVAPGRAI-ARGYGERNPICSNQTSEGRACNRRVEIQILP 279
>gi|254229577|ref|ZP_04922989.1| rickettsia 17 kDa surface antigen family [Vibrio sp. Ex25]
gi|151937860|gb|EDN56706.1| rickettsia 17 kDa surface antigen family [Vibrio sp. Ex25]
Length = 269
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG----------------- 44
+K++ +++ ++ ++GC R+ +++N T
Sbjct: 48 LKKMPIALALVLALTGCQATQRQNATTGEYETNSTTQGALIGAIAGAAIGLATGDDAKER 107
Query: 45 -------------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVS 84
D+ E E + L ++G+ V R+G + + + + F S
Sbjct: 108 RQHALIGAAAGGATGAGVGYYFDQQEAELRRALLNSGVQVQRVGENQLLLRMENGIGFSS 167
Query: 85 EVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L+ L+ +A IL ++P T + I +TDS G+ N +S+ RA+ ++ +L+
Sbjct: 168 SSYQLDASIHNTLRGVARILVEYPDTSLVIDGYTDSTGSESYNQTLSERRAESVRQFLVS 227
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ V+ R I RG+ + PI +N T GR N+R+EIQI P
Sbjct: 228 QNVAPGRAI-ARGYGERNPICSNQTSEGRACNRRVEIQILP 267
>gi|317064862|ref|ZP_07929347.1| outer membrane protein [Fusobacterium ulcerans ATCC 49185]
gi|313690538|gb|EFS27373.1| outer membrane protein [Fusobacterium ulcerans ATCC 49185]
Length = 211
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 31/210 (14%)
Query: 8 SMFIMTTISGCGLAS-----------------------------REKKKVFLHKSNDTDI 38
S+ + I+GC + + K L + +
Sbjct: 3 SLLLALIITGCTSSPFLDETGSVSGKTKGTAGGAAAGALIGQLIGKDTKGTLIGAGVGAL 62
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQ 97
+G+ D+ E E + +L++T + VS+ GD + +P V+F + F L
Sbjct: 63 AGLGWGAYRDRQEQELRERLKNTEVQVSQNGDNLNLNLPGGVTFATDSSNIVSSFYGPLN 122
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IAT+L ++P T I + +TD++G+ N+ +S+ RA +++YLIQ+ S R IS G+
Sbjct: 123 SIATVLVQYPETRIIVNGYTDNVGSASYNVSLSERRAASVRNYLIQQ-GVSARRISYVGY 181
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ P TN T GR N+R+E++I P N
Sbjct: 182 GMENPRATNSTAAGRAENRRVELEILPMSN 211
>gi|239993109|ref|ZP_04713633.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Alteromonas macleodii ATCC 27126]
Length = 213
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 25/208 (12%)
Query: 1 MIKELGLSMFIM-TTISGCGLASREKKKVFLHKSNDTDIVNKRFG--------------- 44
M K L +S+ T++GC +K + ++ K G
Sbjct: 1 MKKTLAVSLIAASLTVAGCATDPNNTQKGAAIGAVVGALLGKATGDNDKSRYAWGAAVGA 60
Query: 45 -------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPML 96
+ +DK E+E + +L DTG+ V R GD + +P ++F + F P+L
Sbjct: 61 IAGGAIGNYMDKQEEELRNELSDTGVQVVREGDNLRLIMPGDITFATDSSSISPNFNPVL 120
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
Q +A ++N + TV+ I+ HTD G+ + N +S+ RA +K+ LI V+ R I+ G
Sbjct: 121 QDVAKVVNNYEKTVLMIKGHTDDTGSEQYNQSLSERRAGAVKNLLINYSVNPTR-ITTVG 179
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P N++ R N+R+E++I P
Sbjct: 180 MGEYAPKVPNNSAANRSMNRRVEMEIQP 207
>gi|317046265|ref|YP_004113913.1| OmpA/MotB domain-containing protein [Pantoea sp. At-9b]
gi|316947882|gb|ADU67357.1| OmpA/MotB domain protein [Pantoea sp. At-9b]
Length = 220
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 89/180 (49%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
GL + + + +++ K L + + G +D E + + +++ TG+ V
Sbjct: 40 GLGAVLGAGVGMMSSSKKDRGKGALIGAASGAALGGGIGYYMDVQEAKLRDKMRGTGVSV 99
Query: 66 SRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L +A +L ++P T + + +TDS GT
Sbjct: 100 TRQGDNIVLNMPNNVTFDSSSSNLKPAGANTLTGVAMVLKEYPKTAVNVTGYTDSTGTRA 159
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RA+ + S LI + + +G P+ +N T+ G+ N+R+EI + P
Sbjct: 160 LNMRLSQQRAESVASALIVQ-GVEANRLRTQGLGPDNPVASNSTEAGKAQNRRVEITLTP 218
>gi|15889974|ref|NP_355655.1| porin [Agrobacterium tumefaciens str. C58]
gi|15157937|gb|AAK88440.1| porin [Agrobacterium tumefaciens str. C58]
Length = 220
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 92/218 (42%), Gaps = 35/218 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG---------------- 44
MIK++ + T +S C + + + + G
Sbjct: 1 MIKKIAIVALCGTYLSACTTTDPYTGEQKMSNTAGGAGIGAVVGALGGLAVGGSPVGRRN 60
Query: 45 -----------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEV 86
+ +D E E + QLQ TG+ V+R GD I +P +++F +
Sbjct: 61 AALIGAGIGALAGGAIGNYMDGQEAELRAQLQGTGVSVTRRGDSIVLNMPSNITFATDQD 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ F L +A +LNKF T+I I HTDS G+L++N +S+ RA + + +
Sbjct: 121 QVIPPFYQTLDSVAIVLNKFNRTLIDINGHTDSTGSLQHNQALSERRAASVAN-YLGARG 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R IS GF PI +N T GR N+R+E+ I P
Sbjct: 180 VDQRRISTLGFGPSQPIASNATSDGRAQNRRVEVLISP 217
>gi|77361745|ref|YP_341320.1| lipoprotein [Pseudoalteromonas haloplanktis TAC125]
gi|76876656|emb|CAI87878.1| putative lipoprotein [Pseudoalteromonas haloplanktis TAC125]
Length = 209
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 3 KELGLSMFIMTTISGC--------------------GLASREKKKVFLHKSNDTDIVNKR 42
K L + +SGC K K + +
Sbjct: 5 KSLLSVTVVAVLLSGCEMNNTGKGAAIGAAAGGVLGKATGNHKDKRIFIGAAIGALAGAA 64
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIAT 101
G +DK E F+ +L +G+ V R GD + +P +++F + ++ F L IA
Sbjct: 65 VGDYMDKQETAFRDELAGSGVEVVREGDNLRLVMPSNITFATDQSYISSGFHNTLSAIAK 124
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
++NK+ T ++++ HTDS G N+ +SQ+RA +K+YL+ + + + R IS G+
Sbjct: 125 VMNKYEKTYLSVEGHTDSTGKDSYNMSLSQQRAQSVKNYLVNQQIMAER-ISTTGYGETR 183
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
PI +ND+ GR N+R+EIQI P
Sbjct: 184 PISSNDSANGRAQNRRVEIQIVPN 207
>gi|108524622|ref|YP_619844.1| hypothetical protein pQKH54_47 [Plasmid QKH54]
gi|99644193|emb|CAJ43326.1| hypothetical protein [Plasmid QKH54]
Length = 220
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 31/214 (14%)
Query: 2 IKELGLSMFIMTTISGCGLASRE-----------------------------KKKVFLHK 32
+K+L + I +SGC + + L
Sbjct: 1 MKKLVSATLIAAALSGCASMKNDDGSLNKTTSYGGLAALAGGVAGALINHNNPGQGALIG 60
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKK 91
+ +G +DK E E + ++ +G+ V R GD + +P ++F + ++
Sbjct: 61 AAIAGSAGAGYGYYVDKQEAELRESMKGSGVEVEREGDQLKLVMPGSITFATGKSEIQPS 120
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F L +A +F + + + HTDS+G+ + N ++S RAD + +L GV +R
Sbjct: 121 FQYTLNQLAASFRQFQDSDLIVTGHTDSVGSYEANQVLSARRADSVSQFLRSNGVDPSR- 179
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ G PI NDT GR N+R+EI++ PR
Sbjct: 180 LQTFGAGSSSPIAPNDTTEGRAQNRRVEIKLVPR 213
>gi|332143465|ref|YP_004429203.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Alteromonas macleodii str. 'Deep
ecotype']
gi|327553487|gb|AEB00206.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Alteromonas macleodii str. 'Deep
ecotype']
Length = 213
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 25/208 (12%)
Query: 1 MIKELGLSMFIM-TTISGCGLASREKKKVFLHKSNDTDIVNKRFG--------------- 44
M K L +S+ TI+GC +K + ++ K G
Sbjct: 1 MKKTLAVSLIAASLTIAGCATDPNNTQKGAAIGAVVGALLGKATGDNDKSRYAWGAAVGA 60
Query: 45 -------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPML 96
+ +DK E+E + +L DTG+ V R GD + +P ++F + F P+L
Sbjct: 61 IAGGAIGNYMDKQEEELRTELSDTGVQVVREGDNLRLIMPGDITFATDSASISPNFNPVL 120
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
Q +A ++N + TV+ I+ HTD G+ + N +S+ RA +K+ LI V+ R I+ G
Sbjct: 121 QDVAKVVNNYEKTVLMIKGHTDDTGSEQYNQSLSERRAGAVKNLLINYSVNPTR-ITTVG 179
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P N++ R N+R+E++I P
Sbjct: 180 MGEYSPKVPNNSAANRSMNRRVEMEIQP 207
>gi|253582159|ref|ZP_04859382.1| outer membrane protein OmpF [Fusobacterium varium ATCC 27725]
gi|251835698|gb|EES64236.1| outer membrane protein OmpF [Fusobacterium varium ATCC 27725]
Length = 186
Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 2 IKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K++ L + ++ ++GC ++ K + + + + + + S E+
Sbjct: 1 MKKVLLMLSASLIVILTGCSSVDKQPLKELVIEETENEFIMEDIDVSKKTLEEII--VFN 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ G+ + R G+ + +P V F ++ ++ K L +A L + P I I +TD
Sbjct: 59 EKGVTIRREGNNLVLSMPELVLFDFNKYEVKNKVKGSLNALAKALEENPDIRIKIDGYTD 118
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
IG+ NL +S +RA+ IK + IS+ G+ + PI +N T+ GR N+R+
Sbjct: 119 FIGSEGYNLELSVKRANAIKD-YLTNRGVKPSNISIEGYGKQNPIASNQTETGRAKNRRV 177
Query: 179 EIQI 182
E I
Sbjct: 178 EFII 181
>gi|311695446|gb|ADP98319.1| OmpA/MotB domain protein [marine bacterium HP15]
Length = 218
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 1 MIKELGLSMFIMTTISGC--------------------------------GLASREKKKV 28
M K + + M + GC + ++ K
Sbjct: 1 MKKMILVFMVATFGLGGCMTYDPYTGEEKTSNATKGSIIGAIGGAAIGAATSSKSDRGKG 60
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
L + + G +DK E E + +L+ TG+ V R GD I +P +++F +E
Sbjct: 61 ALIGAASGAAIGGGVGYYMDKQEAELRRKLEGTGVRVVRNGDEIELVMPGNITFDLNESS 120
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ F L+ +A +L ++ T+I I+ HTDS G+ N L+S+ RA ++ +L+ +
Sbjct: 121 IKPSFSGTLESVALVLKEYDKTIIQIEGHTDSSGSDSYNQLLSERRASSVRDFLLNQ-GI 179
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ G+ +YP+ +NDT GR+ N+R+E+ + P
Sbjct: 180 EPKRTRAVGYGERYPVASNDTAAGREQNRRVELTLVP 216
>gi|315497454|ref|YP_004086258.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48]
gi|315415466|gb|ADU12107.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48]
Length = 222
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 37/220 (16%)
Query: 1 MIKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGS-------------- 45
M + +++ + + + C +V + I+ G+
Sbjct: 1 MRNKALIALAGVALMTAACTTTDPVTGEVVRDNTKTNAIIGAAVGAGLGYATNTNKGEQG 60
Query: 46 --------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
+DK + E + +L T + V+R GD I +P V+F
Sbjct: 61 RKNAVIGAGIGALAGAAVGQYMDKQQAELRRELAGTNVTVTRNGDNIILNMPSDVTFGSG 120
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
++ F P+L +A+ILNK+PST + I H DS G+ N +S++RA+ +YL R
Sbjct: 121 SASIDASFYPVLNDVASILNKYPSTYVDIVGHADSTGSDAINEPLSEDRANSTAAYLTSR 180
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
GV + R V G + PI +N T GR N+R+EI + P
Sbjct: 181 GVVNQRLF-VAGMGSRQPIASNATPEGRAKNRRVEITLRP 219
>gi|253771615|ref|YP_003034446.1| outer membrane lipoprotein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254163475|ref|YP_003046583.1| putative outer membrane lipoprotein [Escherichia coli B str.
REL606]
gi|297520666|ref|ZP_06939052.1| putative outer membrane lipoprotein [Escherichia coli OP50]
gi|300928223|ref|ZP_07143762.1| OmpA family protein [Escherichia coli MS 187-1]
gi|242379069|emb|CAQ33870.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)]
gi|253322659|gb|ACT27261.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253975376|gb|ACT41047.1| predicted outer membrane lipoprotein [Escherichia coli B str.
REL606]
gi|253979532|gb|ACT45202.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)]
gi|300463768|gb|EFK27261.1| OmpA family protein [Escherichia coli MS 187-1]
Length = 219
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
GL + I + +++ K L + G +D E + + +++ TG+ V
Sbjct: 40 GLGSLVGAGIGALSSSKKDRGKGALIGVAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSV 99
Query: 66 SRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L +A +L ++P T + + +TDS G
Sbjct: 100 TRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHD 159
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RAD + S LI +GV ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 160 LNMRLSQQRADSVASALITQGVDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|34763092|ref|ZP_00144063.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27887226|gb|EAA24326.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 202
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + ++ +G+ D E E + +LQ T V + G+ + +P V+F
Sbjct: 39 GKDTKGTLIGAAVGSLLGMGWGAYRDNQERELKAKLQGTQAQVRKDGNALVINLPGGVTF 98
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L IA LN +P T I + +TD+ G +N +SQ RA+ + YL
Sbjct: 99 ASDSANISSGFYSALNGIAQSLNNYPETRIQVNGYTDNTGKDAHNQELSQRRANAVAQYL 158
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I + ++ I GF P+ +N T+ GR N+R+EI+I P
Sbjct: 159 IAQ-GVASNRIVANGFGSSNPVASNSTQEGRLQNRRVEIKILP 200
>gi|262274025|ref|ZP_06051837.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
101886]
gi|262221835|gb|EEY73148.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
101886]
Length = 208
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 1 MIKELGLSMF--IMTTISGCGL-------------------ASREKKKVFLHKSNDTDIV 39
M K + + + GC K K + +
Sbjct: 1 MRKSIPVVTLVTASLMLGGCATNTGKGAAIGAATGAILGKATGNHKDKRIFIGAAIGALA 60
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQL 98
G +D+ E F+ +L +GI V R GD I +P +++F + + F L
Sbjct: 61 GAAVGQYMDRQEAAFREELAGSGIEVVREGDNIRLVMPSNITFGTNQSGISPGFYQSLDA 120
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A ++N++ T ++I+ HTDS G N+ +S++RA+ +KSYL++ V++ R + V G+
Sbjct: 121 VARVMNEYDKTFLSIEGHTDSTGDAAYNMTLSEKRAESVKSYLLRSAVNAKR-LYVTGYG 179
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPR 185
PI +NDT GR N+R+EIQI P
Sbjct: 180 ETQPIASNDTSTGRAQNRRVEIQIVPN 206
>gi|237703321|ref|ZP_04533802.1| OmpA family protein [Escherichia sp. 3_2_53FAA]
gi|226902585|gb|EEH88844.1| OmpA family protein [Escherichia sp. 3_2_53FAA]
gi|315285303|gb|EFU44748.1| OmpA family protein [Escherichia coli MS 110-3]
gi|323954903|gb|EGB50683.1| OmpA family protein [Escherichia coli H263]
Length = 219
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
GL + I + +++ K L + + G +D E + + +++ TG+ V
Sbjct: 40 GLGSLVGAGIGALSSSKKDRGKGALIGAAAGTALGGGVGYYMDVQEAKLRDKMRGTGVSV 99
Query: 66 SRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L +A +L ++P T + + +TDS G+
Sbjct: 100 TRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGSHD 159
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RAD + S LI +GV ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 160 LNMRLSQQRADSVASALITQGVDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|221640526|ref|YP_002526788.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
gi|221161307|gb|ACM02287.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
Length = 228
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 3/176 (1%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
I+ + G AS K + + + I+ GS+LD+ + + + ++ + V+ G
Sbjct: 53 AILGGLVG-ASASDNKLEKAVVGAAVGGILGGAVGSALDRQAADLRNSIGNSQVSVTNTG 111
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ +P + F L L +A L ++P++ IA+ HTDS G+ N
Sbjct: 112 SELVVTMPQDILFATDSANLRPDLQRDLGAVAQNLLRYPNSTIAVVGHTDSTGSAAYNQD 171
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S RA + LI + +S G PI +N T GR N+R++I I P
Sbjct: 172 LSMRRAQSVAGVLIGN-GVPSYRVSAIGRGEDQPIASNLTPEGRAQNRRVDIIIRP 226
>gi|225024888|ref|ZP_03714080.1| hypothetical protein EIKCOROL_01776 [Eikenella corrodens ATCC
23834]
gi|224942346|gb|EEG23555.1| hypothetical protein EIKCOROL_01776 [Eikenella corrodens ATCC
23834]
Length = 219
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 1 MIKELG-LSMFIMTTISGCGLASREKK---------------------------KVFLHK 32
M+K L L++ ++GC + K +
Sbjct: 1 MMKRLTVLTLAATFALNGCVTDPVTGQQTISKTALFGLGGAAACGAVGALTHGSKGARNA 60
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKK 91
+ +V G+ +D E+ + +L +T + V R GD I +P V+F + L
Sbjct: 61 ALGCGVVGAGVGAYMDVQENRLRQELANTPVEVQRQGDQIKLTMPSGVTFATNSSSLSPD 120
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ L +A +L ++P T I + HTD+ G + N +S+ RA + YL RGV+++R
Sbjct: 121 AVNSLNTVANVLTQYPETTITVAGHTDNTGNDRINNPLSKNRARSVAGYLTGRGVAASR- 179
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
IS G+ + P+ N T+ GR N+R+EI I P
Sbjct: 180 ISTVGYGSRSPVADNSTESGRAQNRRVEILINP 212
>gi|256819127|ref|YP_003140406.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256580710|gb|ACU91845.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 230
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 88/223 (39%), Gaps = 37/223 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKK------------------------------VFL 30
M K + L++ ++GC + K +
Sbjct: 1 MKKIVVLALSAAVLLTGCEAYNNSNKAQRGAVIGAAGGALLGAILGNNVGNGQNSELGAV 60
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH----VSFVSEV 86
+ G+ +DK + + ++ G V R+ D I + ++
Sbjct: 61 LGTVVGGAAGAVIGNQMDKQAKKIEEEIP--GADVKRVDDGIVVTFDENNGGVYFDTNKY 118
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ K L ++ IL ++P T + + HTD++G + NL +SQ RA + +Y +G+
Sbjct: 119 NINNKSRQTLDKLSAILKEYPDTNVIVAGHTDNVGKDEYNLGLSQRRAQAVTNYFKSKGL 178
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+R + + + + P+ +N+T GR N+R+ + I P +K
Sbjct: 179 VGSR-FTTKWYGERNPVASNETADGRAKNRRVNVVIVPNEKMK 220
>gi|119472020|ref|ZP_01614278.1| putative lipoprotein [Alteromonadales bacterium TW-7]
gi|119445155|gb|EAW26447.1| putative lipoprotein [Alteromonadales bacterium TW-7]
Length = 210
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 3 KELGLSMFIMTTISGCGL--------------------ASREKKKVFLHKSNDTDIVNKR 42
K L + +SGC + K K + +
Sbjct: 5 KSLLSVTVVAVLLSGCEMNNTGKGAAIGAAAGGVLGKATGNHKDKRIFIGAAIGALAGAA 64
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIAT 101
G +DK E+ F+ +L +G+ V R GD + IP +++F + ++ F L IA
Sbjct: 65 VGDYMDKQEEAFRDELAGSGVEVVREGDNLRLVIPSNITFATDQSYISTGFNDTLNAIAK 124
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
++NK+ T ++++ HTDS G N+ +S+ERA +K+YL + + + R IS GF
Sbjct: 125 VMNKYEKTYLSVEGHTDSTGQDSYNMNLSRERAQSVKAYLANQDIMAAR-ISTSGFGETR 183
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
PI TNDT GR N+R+EIQI P
Sbjct: 184 PIATNDTANGRAQNRRVEIQIVPN 207
>gi|77464614|ref|YP_354118.1| OmpA family protein [Rhodobacter sphaeroides 2.4.1]
gi|126463454|ref|YP_001044568.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|332559507|ref|ZP_08413829.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
gi|77389032|gb|ABA80217.1| OmpA family protein [Rhodobacter sphaeroides 2.4.1]
gi|126105118|gb|ABN77796.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
gi|332277219|gb|EGJ22534.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
Length = 228
Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 3/176 (1%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
I+ + G AS K + + + I+ GS+LD+ + + + ++ + V+ G
Sbjct: 53 AILGGLVG-ASASDNKLEKAVVGAAVGGILGGAVGSALDRQAADLRNSIGNSQVSVTNTG 111
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ +P + F L L +A L ++P++ IA+ HTDS G N
Sbjct: 112 SELVVTMPQDILFATDSANLRPDLQRDLGAVAQNLLRYPNSTIAVVGHTDSTGAAAYNQD 171
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S RA + LI + +S G PI +N T GR N+R++I I P
Sbjct: 172 LSMRRAQSVAGVLIGN-GVPSYRVSAIGRGEDQPIASNLTPEGRAQNRRVDIIIRP 226
>gi|294678012|ref|YP_003578627.1| OmpA family protein [Rhodobacter capsulatus SB 1003]
gi|294476832|gb|ADE86220.1| OmpA family protein [Rhodobacter capsulatus SB 1003]
Length = 224
Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++ ++ ++ + G EK + + ++ G+ LDK E + L
Sbjct: 40 MRGGAITGALIGGVLGATSNGDEKLEKAAAGAIVGGLIGGAIGNQLDKQAQELRRDLDTN 99
Query: 62 GIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G+ V R G+ + +P V F + L ++ LN++P T + + HTDS
Sbjct: 100 GVSVVRQGNQLIVTMPQDVLFAVDSAAVRPDLQRDLYTLSGSLNRYPDTTVDVVGHTDSD 159
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G N +SQ+RA+ + LI GV S R + G + P+ +N + G+ N+R+E
Sbjct: 160 GDAAYNQRLSQDRANAVARILIGAGVPSYRVV-AYGRGEEQPVASNLSAAGKAQNRRVEF 218
Query: 181 QIFPR 185
I P
Sbjct: 219 IIRPN 223
>gi|220933311|ref|YP_002512210.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219994621|gb|ACL71223.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 218
Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 2 IKELGLSMFIMTTI--SGCGL-------------------------------ASREKKKV 28
+K+ L + + + + +GC SR++ +
Sbjct: 1 MKKSLLVLALASVVGFTGCTTLDPYTGEQRTSRATQGALIGAAAGAVIGNVTGSRDRTRR 60
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
+ + + G+ +D+ E E + +L+ TG+ V+R GD + +P +++F +
Sbjct: 61 AMIGAGIGALAGAAVGNYMDQQEAELRRELEGTGVSVTRDGDNLILNMPGNITFDVNRDE 120
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ +F P+L +A +L K+ T I + HTDS GT+++N+ +S RAD + YL+ +
Sbjct: 121 VKSEFYPVLNSVAKVLKKYDKTAIEVAGHTDSTGTVEHNMALSLRRADSVAGYLLGQ-GI 179
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N I+ GF PI N+T GR N+R+E+ + P
Sbjct: 180 QNVRIATIGFGPHRPIADNNTAQGRSLNRRVELTLIP 216
>gi|304311338|ref|YP_003810936.1| Putative outer membrane protein [gamma proteobacterium HdN1]
gi|301797071|emb|CBL45284.1| Putative outer membrane protein [gamma proteobacterium HdN1]
Length = 208
Score = 134 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 1 MIKELGLSMFIMTTISGCGL---ASREKKKVFLHKSNDTDIVNKRFGS------------ 45
M K++ + ++GC K + ++ S
Sbjct: 1 MKKQIVAMLVGSLLLAGCTTDPYTGESKVSKAAIGAGVGAVLGAAVSSKKDRAKGAAIGA 60
Query: 46 --------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPML 96
D+ E + + L +TG+ V+R + I +P +SF S L F P+L
Sbjct: 61 ALGGGTGVYFDRQEAKLRETLNNTGVSVTRTPEGIKLNMPGAISFPSNQSGLMPSFYPVL 120
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ +A +L +F +T I + HTDS G + N +S++RA+ + ++L +GV+ R V G
Sbjct: 121 ESVALVLKEFNNTAIKVSGHTDSTGGAELNQRLSEQRAESVAAFLSGQGVARARM-QVYG 179
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +YP+ N ++ G+ N+R+EI I
Sbjct: 180 YGPRYPVADNKSEAGKAANRRVEIDILN 207
>gi|307293986|ref|ZP_07573830.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
gi|306880137|gb|EFN11354.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
Length = 226
Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILN 104
+D E + + Q +G+ V R GD + +P ++F ++ +F P L +A++L
Sbjct: 80 YMDAQEKKLREQTAGSGVDVIRDGDNLVLRMPSGITFATDSSAVQPQFQPTLNDVASVLA 139
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
++P T I + HTDS GT N +S+ RA + + + I+ RGF PI
Sbjct: 140 QYPKTYIDVYGHTDSDGTDVYNQGLSERRAQAVGD-YLTSHGVQSARIATRGFGETQPIA 198
Query: 165 TNDTKVGRQNNQRIEIQIFP 184
+N T G+ +N+R+EI+I P
Sbjct: 199 SNATAEGKASNRRVEIKIAP 218
>gi|315224547|ref|ZP_07866374.1| OmpA family protein [Capnocytophaga ochracea F0287]
gi|314945568|gb|EFS97590.1| OmpA family protein [Capnocytophaga ochracea F0287]
Length = 230
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 90/223 (40%), Gaps = 37/223 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKK------------------------------VFL 30
M K + L++ + ++GC + K +
Sbjct: 1 MKKIVVLALSVAVLLTGCEAYNNSNKAQRGAVIGAAGGALLGAILGNNVGNGQNSELGAV 60
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH----VSFVSEV 86
+ G+ +DK + + ++ G V R+ D I + ++
Sbjct: 61 LGTVVGGAAGAVIGNQMDKQAKKIEEEIP--GADVKRVDDGIVVTFDENNGGVYFDTNKY 118
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ K L ++ IL ++P T + + HTD++G + NL +SQ RA + +Y +G+
Sbjct: 119 NINNKSRQTLDKLSAILKEYPDTNVIVAGHTDNVGKDEYNLGLSQRRAQAVTNYFKSKGL 178
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ +R + + + + P+ +N+T GR N+R+ + I P +K
Sbjct: 179 AGSR-FTTKWYGERNPVASNETADGRAKNRRVNVVIVPNEKMK 220
>gi|294012887|ref|YP_003546347.1| OmpA-family protein [Sphingobium japonicum UT26S]
gi|292676217|dbj|BAI97735.1| OmpA-family protein [Sphingobium japonicum UT26S]
Length = 226
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILN 104
+D E + + + +G+ V R GD + +P ++F ++ +F P L +A++L
Sbjct: 80 YMDAQERKLREETAGSGVDVIRDGDNLVLRMPSGITFATDSSAVQPQFQPTLNDVASVLA 139
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
++P T I + HTDS GT N +S+ RA + + + I+ RGF PI
Sbjct: 140 QYPKTYIDVYGHTDSDGTDTYNQALSERRAQAVGD-YLTTHGVQSARIATRGFGETQPIA 198
Query: 165 TNDTKVGRQNNQRIEIQIFP 184
+N T G+ +N+R+EI+I P
Sbjct: 199 SNATAEGKASNRRVEIKIAP 218
>gi|257463423|ref|ZP_05627818.1| Outer membrane porin F [Fusobacterium sp. D12]
gi|317060987|ref|ZP_07925472.1| outer membrane porin F [Fusobacterium sp. D12]
gi|313686663|gb|EFS23498.1| outer membrane porin F [Fusobacterium sp. D12]
Length = 193
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 10/186 (5%)
Query: 1 MIKELGLSMFIM-TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL- 58
M K LG+++ + ++ CG S + + N + +D A+ + +
Sbjct: 11 MKKYLGMTVLLASFVLAACGKTSNTSVRDLSTEGNQNFAI-----EDIDTAKKPLEDIIV 65
Query: 59 -QDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G+ + R G+ + +P + F + ++ P L+ +A L I I +
Sbjct: 66 FNQDGVTIRREGNNLILSMPELILFDFDKYEVKDGIKPSLRTLANALGANSDIKIKIDGY 125
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD IG+ NL +S RA I + + IS+ G+ + P+ +N T+ GR N+
Sbjct: 126 TDFIGSEGYNLELSVNRAKAI-KSYLVNHGAIENNISIEGYGKQNPVASNATESGRARNR 184
Query: 177 RIEIQI 182
R+E I
Sbjct: 185 RVEFII 190
>gi|90022262|ref|YP_528089.1| OmpA family protein [Saccharophagus degradans 2-40]
gi|89951862|gb|ABD81877.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 225
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K G+ I + +++ + + + + G +DK E E + QLQ TG
Sbjct: 42 KGAGIGAVTGAIIGAATSSDKDRDRGIITGAVAGAAIGGGVGYYMDKQEAELRHQLQGTG 101
Query: 63 IVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V R G+ + +P +++F + + + +F +L +A +L K+ T I + HTD+ G
Sbjct: 102 VQVRREGNNLFLVMPGNITFDTAQYSIRSQFYEVLDSVAVVLKKYDKTAILVSGHTDNRG 161
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N +S++RA +K+YL+Q+GV++ R SV G+ Y+YP+ +ND+ GR+ N+R+E++
Sbjct: 162 SSDYNQTLSEQRAGSVKAYLMQKGVAAGRVNSV-GYGYRYPVASNDSAAGREQNRRVELK 220
Query: 182 IFP 184
+ P
Sbjct: 221 LEP 223
>gi|260599847|ref|YP_003212418.1| putative outer membrane lipoprotein [Cronobacter turicensis z3032]
gi|260219024|emb|CBA34379.1| Inner membrane lipoprotein yiaD [Cronobacter turicensis z3032]
Length = 220
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFL---HKSNDTDIVNKRFG---------- 44
M K + I +SGC ++ + +V G
Sbjct: 1 MKKRIIFVAAIVSGALALSGCTTNPYTGEREAGKSGIGAGIGSLVGAGVGVLSSSKKDRG 60
Query: 45 ------------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE- 85
+D E + + ++Q TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRQKMQGTGVSVTRSGDNIILNMPNNVTFDSSQ 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RA+ + S LI +
Sbjct: 121 ANLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGGQALNMKLSQQRAESVASALITQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I G P+ +N T+ G+ N+R+EI + P
Sbjct: 180 GVAANRIRTSGMGPANPVASNSTEEGKAQNRRVEITLSP 218
>gi|192360671|ref|YP_001983282.1| OmpA family protein [Cellvibrio japonicus Ueda107]
gi|190686836|gb|ACE84514.1| OmpA family protein [Cellvibrio japonicus Ueda107]
Length = 217
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 104/219 (47%), Gaps = 36/219 (16%)
Query: 2 IKELGLSMFIMTTISGCGLAS---------------------------------REKKKV 28
+K + +++ + T+ GC +++++
Sbjct: 1 MKYI-IALLLSFTMIGCTTTDPYTGEQKTSKTAKGAGIGAVAGAVLGAATGDNAKDRRER 59
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-F 87
L + ++ G+ +D+ E + + +LQ TG+ V R G+ + +P +++F +
Sbjct: 60 ALKGAAIGGVIGGGVGNYMDRQEAKLRAELQGTGVQVRREGNNLYLIMPGNITFATSSAD 119
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
+ F P+L +A ++ +F T I + HTDS G+ N +S+ RAD + YL + V+
Sbjct: 120 IRSDFFPVLNSVAKVVAEFNQTSIRVTGHTDSTGSDSINQPLSERRADSVAMYLRSQKVA 179
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S R I G+ +YP+ +NDT GR+ N+R+E+++ P
Sbjct: 180 SAR-IQAYGYGSRYPVASNDTPTGREQNRRVELELIPNE 217
>gi|262394500|ref|YP_003286354.1| outer membrane protein [Vibrio sp. Ex25]
gi|262338094|gb|ACY51889.1| outer membrane protein [Vibrio sp. Ex25]
Length = 222
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG----------------- 44
+K++ +++ ++ ++GC R+ +++N T
Sbjct: 1 MKKMPIALALVLALTGCQATQRQNATTGEYETNSTTQGALIGAIAGAAIGLATGDDAKER 60
Query: 45 -------------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVS 84
D+ E E + L ++G+ V R+G + + + + F S
Sbjct: 61 RQHALIGAAAGGATGAGVGYYFDQQEAELRRALLNSGVQVQRVGENQLLLRMENGIGFSS 120
Query: 85 EVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L+ L+ +A IL ++P T + I +TDS G+ N +S+ RA+ ++ +L+
Sbjct: 121 SSYQLDASIHNTLRGVARILVEYPDTSLVIDGYTDSTGSESYNQTLSERRAESVRQFLVS 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ V+ R I RG+ + PI +N T GR N+R+EIQI P
Sbjct: 181 QNVAPGRAI-ARGYGERNPICSNQTSEGRACNRRVEIQILP 220
>gi|156936282|ref|YP_001440198.1| putative outer membrane lipoprotein [Cronobacter sakazakii ATCC
BAA-894]
gi|156534536|gb|ABU79362.1| hypothetical protein ESA_04181 [Cronobacter sakazakii ATCC BAA-894]
Length = 220
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFL---HKSNDTDIVNKRFG---------- 44
M K + + +SGC ++ + +V G
Sbjct: 1 MKKRIIFVAAMVSGALALSGCTTNPYTGEREAGKSGIGAGIGSLVGAGVGVLSSSKKDRG 60
Query: 45 ------------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE- 85
+D E + + ++Q TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRQKMQGTGVSVTRSGDNIILNMPNNVTFDSSQ 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RA+ + S LI +
Sbjct: 121 ANLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGGQALNMKLSQQRAESVASALITQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I G P+ +N T+ G+ N+R+EI + P
Sbjct: 180 GVAANRIRTSGMGPANPVASNSTEEGKAQNRRVEITLSP 218
>gi|126736820|ref|ZP_01752555.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
gi|126721405|gb|EBA18108.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
Length = 205
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ + + G+ LD E E + L + I + GD + P ++
Sbjct: 40 DSDRGLGAVTGALVGATAGGVIGNQLDAQERELRQSLANDSISIVNTGDRLILSFPNDLT 99
Query: 82 F-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F + L+ +A L ++P++ + + HTDS G N +S+ RA+ +
Sbjct: 100 FATDSAAISPVVQADLRSVAGSLVRYPNSTVQVIGHTDSDGDASYNQGLSERRANAVADQ 159
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ GV +R + + G + P+ +N T G+ N+R+E+ I P+
Sbjct: 160 IQAGGVPYHR-LRIIGLGEEQPVASNLTPEGKARNRRVEVVIIPQA 204
>gi|168260613|ref|ZP_02682586.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|205350258|gb|EDZ36889.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 220
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGS--------- 45
M K + + I +SGC ++ + +V G+
Sbjct: 1 MKKRVFVIAAIVSGALAVSGCTTNPYTGEREAGKSGIGAGIGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G+ N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGADTLTGVAMVLKEYPKTAVNVVGYTDSTGSHDLNMRLSQQRADSVASSLITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V ++R I G PI +N T G+ N+R+EI + P
Sbjct: 181 VDASR-IRTSGMGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|28898041|ref|NP_797646.1| putative lipoprotein [Vibrio parahaemolyticus RIMD 2210633]
gi|308094661|ref|ZP_05890745.2| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308095662|ref|ZP_05907484.2| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308125455|ref|ZP_05775378.2| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|308126686|ref|ZP_05911817.2| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|28806255|dbj|BAC59530.1| putative lipoprotein [Vibrio parahaemolyticus RIMD 2210633]
gi|308088657|gb|EFO38352.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308091164|gb|EFO40859.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308107632|gb|EFO45172.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|308115580|gb|EFO53120.1| outer membrane protein [Vibrio parahaemolyticus K5030]
Length = 222
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG----------------- 44
+K++ +++ ++ ++GC R+ +++N T
Sbjct: 1 MKKMSIALALVLALTGCQATQRQNATTGEYETNSTTQGALIGAIAGAAIGLATGDNAKER 60
Query: 45 -------------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVS 84
D+ E E + L ++G+ V R+G + + + + F S
Sbjct: 61 RKHALIGAAAGGATGAGVGYYFDQQEAELRRALLNSGVQVQRVGENQLLLRMENGIGFSS 120
Query: 85 EVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L+ L+ +A IL ++P T + I +TDS G+ N +S+ RA+ ++ +L+
Sbjct: 121 SSYQLDASIHNTLRGVARILVEYPDTSLVIDGYTDSTGSESYNQTLSERRAESVRQFLVS 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ V+ R I RG+ + PI +N T GR N+R+EIQI P
Sbjct: 181 QKVAPGRAI-ARGYGERNPICSNQTSEGRACNRRVEIQILP 220
>gi|320182069|gb|EFW56974.1| Outer membrane protein A precursor [Shigella boydii ATCC 9905]
Length = 219
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASRE---KKKVFLHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC + + +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTTPYTGERETGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGMGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 181 VDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|237738475|ref|ZP_04568956.1| outer membrane porin F [Fusobacterium mortiferum ATCC 9817]
gi|229420355|gb|EEO35402.1| outer membrane porin F [Fusobacterium mortiferum ATCC 9817]
Length = 185
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 93/188 (49%), Gaps = 6/188 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ + + ++ I+GC + K++ K ++T + + ++ ED +
Sbjct: 1 MKKIFMVLSLVGVIAGCTSTQGQFKEIT-IKESETQYILEDVTTTEKPLEDII--VFNEE 57
Query: 62 GIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G+V+ + G+ + +PV + F +++ L + L + + I HTD I
Sbjct: 58 GVVIRKDGNNLVLSMPVEILFDFDSSKVKEGVKESLNTLGKALAENKDIKLKIDGHTDYI 117
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + NL +S +RA+ IK+YLI R S IS+ G+ + P+ N T+ GR N+R+E
Sbjct: 118 GTEQYNLNLSLKRANSIKNYLIGR-GVSANNISIEGYGKQNPVANNSTEAGRAKNRRVEF 176
Query: 181 QIFPRGNI 188
I R +
Sbjct: 177 -IISRDKV 183
>gi|114800290|ref|YP_762003.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
gi|114740464|gb|ABI78589.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
Length = 211
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 26/209 (12%)
Query: 1 MIKELGLSMFIMT-TISGCGLASR-----------------------EKKKVFLHKSNDT 36
M + ++ +M + C + K+ +
Sbjct: 1 MKTSVLIAAALMLPLVQACETGPSQRVLTTGAAGAILGAGAGMMAGGDDKRNAAIGAAVG 60
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
+ G +D+ E++ + Q TGI V R GD I +P +SF ++ F
Sbjct: 61 AVAGASVGVYMDRQEEKLRQQTAGTGIEVERQGDQIALTMPSGISFQQGSAQIQPAFYQT 120
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +A LN++PST + I+ H S G N +SQ+RAD + + +S
Sbjct: 121 LNDVAATLNEYPSTAVDIRGHASSEGARDFNQRLSQQRADAV-RSYLTNQGVQGVRMSAV 179
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G YP+ N T+ GR N+R+EI + P
Sbjct: 180 GMGIDYPVADNSTEAGRSQNRRVEIILTP 208
>gi|167990874|ref|ZP_02571973.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205330659|gb|EDZ17423.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
Length = 220
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGS--------- 45
M K + + I +SGC ++ + +V G+
Sbjct: 1 MKKRVFVIAAIVSGALAVSGCTTNPYTGEREAGKSGIGAGIGSLVGAGIGAFSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G+ N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGSHDLNMRLSQQRADSVASSLITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V ++R I G PI +N T G+ N+R+EI + P
Sbjct: 181 VDASR-IRTSGMGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|261856649|ref|YP_003263932.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261837118|gb|ACX96885.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 216
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 33/215 (15%)
Query: 2 IKELGLSMFIM--TTISGCG-----------------------------LASREKKKVFL 30
+K+ G+ + T ++GC S K L
Sbjct: 1 MKKFGMLGLAVGLTVLAGCAQNPYQGQYGKTAGGATIGAGIGALAGNLIAGSGNKTGGTL 60
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE 89
+ V G+ +DK + Q Q+ +TG+ V R GD I P ++F + L+
Sbjct: 61 IGAAVGAGVGGLIGNQMDKQAAQLQQQMANTGVEVQRQGDGIHLQAPEAITFNTNSATLK 120
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+F+P+LQ +A +N++P T++ ++ +TDS G+ N +S RA + S + +
Sbjct: 121 PQFMPVLQQLAQSVNQYPGTIVRVEGNTDSTGSASYNQQLSLNRAQSVAS-ALSQYGVPY 179
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I G+ PI +N T GR N+R++I I P
Sbjct: 180 NRIQAVGYGMTRPIASNATAAGRAQNRRVDILIVP 214
>gi|255067217|ref|ZP_05319072.1| OmpA family protein [Neisseria sicca ATCC 29256]
gi|255048585|gb|EET44049.1| OmpA family protein [Neisseria sicca ATCC 29256]
Length = 261
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + G A K + + + G +D E + + L++T I
Sbjct: 69 KTAMYGLGGAAVCGIVGALTHGGKGARNSALACGAIGAGVGGYMDYQEKKLRENLKNTNI 128
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V R G+ I +P +V+F L + L + L ++P T + I HTD+ G
Sbjct: 129 EVERQGNQIKLVMPENVTFATGSAALSDQARNALATASETLVQYPDTTLTINGHTDNTGN 188
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA + YL RGV+ +R ++ G+ ++PI +N T GR N+R+EI I
Sbjct: 189 DAINEPLSRNRALAVADYLQSRGVNGSR-LTTAGYGSRHPIASNATAEGRAQNRRVEILI 247
Query: 183 FPRGN 187
P N
Sbjct: 248 NPDQN 252
>gi|259417844|ref|ZP_05741763.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259346750|gb|EEW58564.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 221
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 2/169 (1%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ +K + + + + G LDK E E + L + I + GD + +P
Sbjct: 54 TSDDDKAETIIGTAAVGALAGGLIGRELDKQEAELRQSLDNDSISIVNTGDRLIVSLPND 113
Query: 80 VSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++F + L+ +A L ++P +V+ + HTDS G N +S+ RA+ +
Sbjct: 114 LTFATDSSAISSVVRSDLRKVAGSLQRYPGSVVQVIGHTDSDGAASYNYSLSERRANAVA 173
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ GVS NR + G P+ +N T G+ N+R+EI I P+ +
Sbjct: 174 DEIAAGGVSYNRM-RIIGRGEDQPVASNLTAEGKARNRRVEIVIIPQAS 221
>gi|209809526|ref|YP_002265064.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
gi|208011088|emb|CAQ81507.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
Length = 222
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGC-------GLASREKKKVFLHKSNDTDIVNKRFG---------- 44
+K++ +++ ++ ++GC + + + G
Sbjct: 1 MKKITIALALLIGLTGCQATQRQNATTGETETNSATKGALAGILAGVAVGLATGDNAKER 60
Query: 45 -------------------SSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVS 84
D E + +L+ +G+ V R+GD + + V F S
Sbjct: 61 RKNALIGAAAGGAVGGGVGYYFDSQEQALRDELKSSGVQVERVGDNELKLIMDNGVGFQS 120
Query: 85 EVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L+ L +A IL ++P T + I HTDS G N +S++RA+ +++YLI+
Sbjct: 121 SSYQLDASIYNTLNGVARILVEYPDTALQIDGHTDSSGNDTKNQTLSEQRAESVRTYLIK 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ V++ R ++ RG+ +YP+ N T GR N+R+EI I P
Sbjct: 181 QKVAAGR-VNARGYGERYPVFDNSTSQGRACNRRVEITILP 220
>gi|323491313|ref|ZP_08096498.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546]
gi|323314439|gb|EGA67518.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546]
Length = 222
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG----------------- 44
+K++ L++ + +SGC R+ ++N
Sbjct: 1 MKKITLALAVAIALSGCQATQRQNATTGETETNSATQGALIGAIAGAAVGLATGDDAKER 60
Query: 45 -------------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVS 84
D+ E + QL ++G+ V R+G + + + + F S
Sbjct: 61 RKHALIGAAGGAAVGGGVGYYFDQQEAALRKQLLNSGVQVERVGENQLLLRLENGIGFQS 120
Query: 85 EVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L+ L+ +A IL ++P T + I HTDS G+ N ++S+ RA+ ++SYL+
Sbjct: 121 SSYQLDSSIHNTLRGVAQILVEYPDTSLVIDGHTDSTGSDTTNQVLSERRAESVRSYLVS 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV++ R I RG +YP+ TN T GR N+R+EIQI P
Sbjct: 181 QGVAAGRAI-ARGNGERYPLCTNSTTEGRACNRRVEIQILP 220
>gi|262068012|ref|ZP_06027624.1| OmpA family protein [Fusobacterium periodonticum ATCC 33693]
gi|291378280|gb|EFE85798.1| OmpA family protein [Fusobacterium periodonticum ATCC 33693]
Length = 212
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + ++ +G+ D E + L+ T V G+ + +P V+F
Sbjct: 49 GKDTKGTLIGAAVGSLLGMGWGAYKDNQARELKAALKGTQAEVRNDGNALVVNLPGGVTF 108
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L +A L K+P T I + +TDS G +NL +SQ RA+ + Y
Sbjct: 109 ASDSANISSGFYSALNGVAQTLVKYPETRIQVNGYTDSTGGDAHNLDLSQRRANAVAQYF 168
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I + S+ I GF PI +N T GRQ N+R+E++I P
Sbjct: 169 IAQ-GVSSNRIVANGFGSSNPIASNATPEGRQANRRVEVRILP 210
>gi|126724952|ref|ZP_01740795.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
gi|126706116|gb|EBA05206.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
Length = 218
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 32/217 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG---------------- 44
M ++ L++ ++GC A+ ++ +N + G
Sbjct: 3 MKSKMALALASTLVLAGCDTAANNERNGPNANANVGAAIGGMLGGFVGLKSDDNKLLKGV 62
Query: 45 --------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLE 89
SLD+ + + L + + + GD + +P + F F+
Sbjct: 63 VGAGIGAAIGGAIGQSLDRQAADLEKSLDNDDVSIVNEGDRLVVTLPQDILFDVDSDFVS 122
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L +A LN +P++ I I HTD+ G+ +N +S RA + LI GV++
Sbjct: 123 SSLRGDLYKVANNLNSYPNSTIQIIGHTDNSGSAAHNQDLSARRAGSVSGILIDGGVAAG 182
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
R +S G P+ TN T GR N+R+EI I P G
Sbjct: 183 RVVS-FGRGEDQPVATNLTAEGRAENRRVEIIILPTG 218
>gi|146276251|ref|YP_001166410.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145554492|gb|ABP69105.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 228
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 3/176 (1%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
I+ + G AS K + + + I+ GS+LD+ + + + ++ + V+ G
Sbjct: 53 AILGGLVG-ASASDNKLEKAVVGAAVGGILGGAVGSALDRQAADLRNSIGNSQVSVTNTG 111
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ +P + F L L +A L ++P++ I + HTDS G+ N
Sbjct: 112 SELVVTMPQDILFATDSANLRPDLQRDLAAVAQNLLRYPNSTIMVVGHTDSTGSAAYNQD 171
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S RA + LI + ++ G PI +N T GR N+R++I I P
Sbjct: 172 LSMRRAQSVAGVLIGN-GVPSYRVASLGRGEDQPIASNLTPEGRAQNRRVDIIIRP 226
>gi|261252822|ref|ZP_05945395.1| outer membrane protein [Vibrio orientalis CIP 102891]
gi|260936213|gb|EEX92202.1| outer membrane protein [Vibrio orientalis CIP 102891]
Length = 222
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGC-------GLASREKKKVFLHKSNDTDIVNKRFG---------- 44
+K++ L++ + ++GC + + + G
Sbjct: 1 MKKMTLALAVAIALTGCQATQRQNATTGESETNSATKGALIGALTGVAVGLATGDNADER 60
Query: 45 -------------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVS 84
D+ E + +L D+G+ V R+G + + + + F S
Sbjct: 61 RKHALIGAAGGAAVGGGVGYYFDQQEAALRKELLDSGVQVERVGENQLMLRLENGIGFQS 120
Query: 85 EVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L+ L+ +A IL ++P T + I HTDS G+ N ++S+ RA+ ++SYL+
Sbjct: 121 SSYALDPSIHNTLRGVARILVEYPDTSLVIDGHTDSTGSDTTNQVLSERRAESVRSYLVS 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV++ R + RG +YPI TNDT GR N+R+EIQI P
Sbjct: 181 QGVAAGRAV-ARGNGERYPICTNDTTTGRACNRRVEIQILP 220
>gi|16762663|ref|NP_458280.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16766931|ref|NP_462546.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29144150|ref|NP_807492.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62182147|ref|YP_218564.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161505818|ref|YP_001572930.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|161616710|ref|YP_001590675.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167549121|ref|ZP_02342880.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|168232486|ref|ZP_02657544.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168235246|ref|ZP_02660304.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168241813|ref|ZP_02666745.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168465059|ref|ZP_02698951.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168818532|ref|ZP_02830532.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194446335|ref|YP_002042894.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194450414|ref|YP_002047675.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194470919|ref|ZP_03076903.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194738075|ref|YP_002116578.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197250152|ref|YP_002148575.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197264832|ref|ZP_03164906.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|198245549|ref|YP_002217605.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200387506|ref|ZP_03214118.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204928737|ref|ZP_03219936.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|213426937|ref|ZP_03359687.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213580286|ref|ZP_03362112.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213622354|ref|ZP_03375137.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213646868|ref|ZP_03376921.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213852846|ref|ZP_03382378.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|224585444|ref|YP_002639243.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238910327|ref|ZP_04654164.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|289811587|ref|ZP_06542216.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
gi|289824292|ref|ZP_06543885.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|25512154|pir||AC0982 probable outer membrane protein STY4157 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16422210|gb|AAL22505.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16504969|emb|CAD07983.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139787|gb|AAO71352.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|62129780|gb|AAX67483.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|160867165|gb|ABX23788.1| hypothetical protein SARI_03994 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gi|161366074|gb|ABX69842.1| hypothetical protein SPAB_04529 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404998|gb|ACF65220.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194408718|gb|ACF68937.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194457283|gb|EDX46122.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194713577|gb|ACF92798.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195632363|gb|EDX50847.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197213855|gb|ACH51252.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197243087|gb|EDY25707.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197291562|gb|EDY30914.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197940065|gb|ACH77398.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199604604|gb|EDZ03149.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204322170|gb|EDZ07368.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205325701|gb|EDZ13540.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205333235|gb|EDZ19999.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205338706|gb|EDZ25470.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205344463|gb|EDZ31227.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|224469972|gb|ACN47802.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|267995894|gb|ACY90779.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|312914671|dbj|BAJ38645.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320088065|emb|CBY97827.1| Inner membrane lipoprotein yiaD Flags: Precursor [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|321226700|gb|EFX51750.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322613966|gb|EFY10902.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620335|gb|EFY17203.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625340|gb|EFY22167.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629993|gb|EFY26766.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322634183|gb|EFY30918.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635916|gb|EFY32625.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643166|gb|EFY39740.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644613|gb|EFY41149.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650855|gb|EFY47247.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322652981|gb|EFY49316.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322659944|gb|EFY56184.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663277|gb|EFY59481.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322668763|gb|EFY64916.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674434|gb|EFY70527.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678358|gb|EFY74419.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680864|gb|EFY76898.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687200|gb|EFY83173.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322716635|gb|EFZ08206.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323132006|gb|ADX19436.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323192159|gb|EFZ77392.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323200663|gb|EFZ85737.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323201373|gb|EFZ86439.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206773|gb|EFZ91727.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211797|gb|EFZ96629.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216156|gb|EGA00884.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323220379|gb|EGA04833.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226236|gb|EGA10451.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323228356|gb|EGA12487.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234177|gb|EGA18265.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237162|gb|EGA21229.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244681|gb|EGA28685.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249162|gb|EGA33080.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250719|gb|EGA34599.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257594|gb|EGA41281.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262303|gb|EGA45864.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266142|gb|EGA49633.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323268777|gb|EGA52235.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326625391|gb|EGE31736.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326629887|gb|EGE36230.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
gi|332990496|gb|AEF09479.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 220
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGS--------- 45
M K + + I +SGC ++ + +V G+
Sbjct: 1 MKKRVFVIAAIVSGALAVSGCTTNPYTGEREAGKSGIGAGIGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G+ N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGSHDLNMRLSQQRADSVASSLITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V ++R I G PI +N T G+ N+R+EI + P
Sbjct: 181 VDASR-IRTSGMGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|254785154|ref|YP_003072582.1| OmpA family protein [Teredinibacter turnerae T7901]
gi|237683675|gb|ACR10939.1| OmpA family protein [Teredinibacter turnerae T7901]
Length = 216
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ +++ + + + V G +D+ E + + QLQ +G+ V R G+ I +P +
Sbjct: 50 SSDKDRDRGLITGAVAGAAVGGGVGYYMDRQESKLRQQLQGSGVQVQRDGNTINLIMPGN 109
Query: 80 VSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++F ++ ++ +F +L +A +L +F TVI + HTDS G+ N +S+ RA+ ++
Sbjct: 110 ITFATDSFDIKPEFHSVLDSVAQVLKEFKKTVIVVSGHTDSTGSATYNQQLSENRANSVR 169
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
SYL+ R V+S R + G+ + PI +N T GRQ N+R+E+++ P
Sbjct: 170 SYLLNRSVASGR-VQAVGYGPRMPIASNKTAQGRQQNRRVELKLEP 214
>gi|99082288|ref|YP_614442.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99038568|gb|ABF65180.1| OmpA/MotB [Ruegeria sp. TM1040]
Length = 221
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 2/169 (1%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A +K + + + + G LDK E E + L + I + GD + +P
Sbjct: 54 TADDDKAETIIGTAAVGALAGGLIGRELDKQEAELRQSLDNDSISIVNTGDRLIVSLPND 113
Query: 80 VSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++F + L+ +A L ++P +++ + HTDS G N +S+ RA+ +
Sbjct: 114 LTFATDSAAISSVVRSDLRKVAGSLQRYPGSIVQVIGHTDSDGAASYNYSLSERRANAVA 173
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ GVS R + G P+ +N T G+ N+R+EI I P+ +
Sbjct: 174 DEIAAGGVSYGRM-RIIGRGEDQPVASNLTPEGKARNRRVEIVIIPQAS 221
>gi|90416505|ref|ZP_01224436.1| ompA family protein [marine gamma proteobacterium HTCC2207]
gi|90331704|gb|EAS46932.1| ompA family protein [marine gamma proteobacterium HTCC2207]
Length = 220
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 33/211 (15%)
Query: 6 GLSMFIMTTISGCGL----ASREKKKVFLHKSNDTDIVNKR------------------- 42
S+ I+ ++S C +K ++ V
Sbjct: 8 LFSLAILVSLSACTTFDPYTGEQKTTKTAIGASIGAGVGAVVAYLDNKDEDSRKRNKRIL 67
Query: 43 --------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFL 93
G +D E + + QL+ +G+ V R+GD I +P +++F + + F
Sbjct: 68 AAAGGGAAIGYYMDAQEAKLRQQLRGSGVSVERVGDNINLIMPGNITFASNSADINASFY 127
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+L +A +L ++ T++ + HTDS G N +S+ RA + YL+ + + R +
Sbjct: 128 SVLDSVALVLEEYDKTLVVVAGHTDSDGGAAFNEDLSERRAQSVSGYLVSQSILPIRLET 187
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V GF + PI ND+ G+Q N+R+EI + P
Sbjct: 188 V-GFGERQPIAGNDSAAGKQLNRRVEITLLP 217
>gi|237740687|ref|ZP_04571168.1| outer membrane protein [Fusobacterium sp. 2_1_31]
gi|229422704|gb|EEO37751.1| outer membrane protein [Fusobacterium sp. 2_1_31]
Length = 212
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + ++ +G+ D E + L+ T V G+ + +P V+F
Sbjct: 49 GKDTKGTLIGAAVGSLLGMGWGAYKDNQARELRAALKGTQAEVRNDGNALVVNLPGGVTF 108
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L +A L ++P T I + +TDS G +N +SQ RA+ + YL
Sbjct: 109 ASDSANISSGFYSALNGVAQTLVRYPETRIQVNGYTDSTGGDAHNQELSQRRANSVAQYL 168
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I +GVSS+R + GF PI +N T GRQ N+R+E++I P
Sbjct: 169 ISQGVSSSRIV-ANGFGSSNPIASNATPEGRQANRRVEVRILP 210
>gi|327395890|dbj|BAK13312.1| inner membrane lipoprotein YiaD precursor [Pantoea ananatis
AJ13355]
Length = 237
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
GL + + + +++ K L + + G +D E + + +++ TG+ V
Sbjct: 57 GLGALVGAGVGVLSSSKKDRGKGALIGAASGAALGGGVGYYMDVQEAKLRDKMKGTGVSV 116
Query: 66 SRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L +A +L ++P T + + HTDS G+
Sbjct: 117 TRQGDNIVLNMPNNVTFDSSSSSLKPAGANTLTGVAMVLKEYPKTAVNVVGHTDSTGSRA 176
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RA+ + S LI + ++ + RG P+ TN T+ G+ N+R+EI + P
Sbjct: 177 LNMRLSQQRAESVASALIVQ-GVASDRLHTRGAGPDSPVATNSTEAGKAQNRRVEITLSP 235
>gi|194099378|ref|YP_002002478.1| hypothetical protein NGK_1853 [Neisseria gonorrhoeae NCCP11945]
gi|239999626|ref|ZP_04719550.1| hypothetical protein Ngon3_09112 [Neisseria gonorrhoeae 35/02]
gi|240014801|ref|ZP_04721714.1| hypothetical protein NgonD_09194 [Neisseria gonorrhoeae DGI18]
gi|240017250|ref|ZP_04723790.1| hypothetical protein NgonFA_08817 [Neisseria gonorrhoeae FA6140]
gi|240081113|ref|ZP_04725656.1| hypothetical protein NgonF_07349 [Neisseria gonorrhoeae FA19]
gi|240113325|ref|ZP_04727815.1| hypothetical protein NgonM_07083 [Neisseria gonorrhoeae MS11]
gi|240116327|ref|ZP_04730389.1| hypothetical protein NgonPID1_08846 [Neisseria gonorrhoeae PID18]
gi|240118614|ref|ZP_04732676.1| hypothetical protein NgonPID_09178 [Neisseria gonorrhoeae PID1]
gi|240121324|ref|ZP_04734286.1| hypothetical protein NgonPI_06069 [Neisseria gonorrhoeae PID24-1]
gi|240124157|ref|ZP_04737113.1| hypothetical protein NgonP_09504 [Neisseria gonorrhoeae PID332]
gi|240126226|ref|ZP_04739112.1| hypothetical protein NgonSK_08443 [Neisseria gonorrhoeae SK-92-679]
gi|240128827|ref|ZP_04741488.1| hypothetical protein NgonS_09423 [Neisseria gonorrhoeae SK-93-1035]
gi|293398468|ref|ZP_06642646.1| hypothetical protein NGNG_01123 [Neisseria gonorrhoeae F62]
gi|193934668|gb|ACF30492.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
gi|291610939|gb|EFF40036.1| hypothetical protein NGNG_01123 [Neisseria gonorrhoeae F62]
gi|317164880|gb|ADV08421.1| hypothetical protein NGTW08_1460 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 225
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + G A K + + + G +D E + L T I
Sbjct: 34 KSAMYGLGGAAVCGIVGALTHSGKGARNSALACGAIGAGVGGYMDYQEQRLRQNLAGTQI 93
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ R G+ I +P V+F L L A L ++P T + I HTD+ G+
Sbjct: 94 EIQRQGNQIRLVMPESVTFATGSAALGGSAQYALNTAAQTLVQYPDTTLTINGHTDNTGS 153
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL RGV+++R ++V G+ P+ +N T GR N+R+EI I
Sbjct: 154 DAVNNPLSQHRAQAVAYYLQTRGVAASR-LTVYGYGSHMPVASNATVEGRAQNRRVEILI 212
Query: 183 FP 184
P
Sbjct: 213 NP 214
>gi|312174309|emb|CBX82562.1| putative outer membrane lipoprotein yiaD precursor [Erwinia
amylovora ATCC BAA-2158]
Length = 221
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 97/220 (44%), Gaps = 37/220 (16%)
Query: 1 MIKELGLSMFIMT----TISGC-------------------------------GLASREK 25
M K+ +++ ++ ++GC + +++
Sbjct: 1 MKKKSVMTLALLLSGTVALTGCTTNPYTGEREAGKSGIGAGIGAALGAGVGMLSSSKKDR 60
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K L + + G +D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 GKGALIGATAGAALGGGAGYYMDVQEAKLRDKMKGTGVSVTRSGDNIVLNMPNNVTFDSS 120
Query: 86 V-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L+ L +A +L ++P T + + +TDS G+ + N+ +SQ+RAD + S LI +
Sbjct: 121 SSTLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSSGSRQLNMNLSQQRADGVGSALIAQ 180
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ + G P+ +N + G+ N+R+EI + P
Sbjct: 181 -GVAANRVRTNGMGSDNPVASNSSAEGKAQNRRVEITLSP 219
>gi|205354747|ref|YP_002228548.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207858882|ref|YP_002245533.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|205274528|emb|CAR39567.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|206710685|emb|CAR35045.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261248795|emb|CBG26648.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|301160182|emb|CBW19704.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
Length = 209
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
G+ + I + +++ K L + + G +D E + + +++ TG+ V
Sbjct: 29 GIGSLVGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSV 88
Query: 66 SRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L +A +L ++P T + + +TDS G+
Sbjct: 89 TRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGSHD 148
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RAD + S LI +GV ++R I G PI +N T G+ N+R+EI + P
Sbjct: 149 LNMRLSQQRADSVASSLITQGVDASR-IRTSGMGPANPIASNSTAEGKAQNRRVEITLSP 207
>gi|89092082|ref|ZP_01165037.1| hypothetical protein MED92_07941 [Oceanospirillum sp. MED92]
gi|89083817|gb|EAR63034.1| hypothetical protein MED92_07941 [Oceanospirillum sp. MED92]
Length = 218
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 34/214 (15%)
Query: 2 IKELGLSMFIMTTISGCG--------------------------------LASREKKKVF 29
+K+L ++GC + ++ K
Sbjct: 1 MKKLVSVAVAGLLLAGCQTIDPYTGEQKVGNTTKGAGIGAVAGAVLGMAVSSKDDRGKGA 60
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFL 88
L + V G +D+ E + +L+ TG+ V RIGD I +P +++F + +
Sbjct: 61 LTGALVGGAVGGGIGYYMDQQEALLRQELEGTGVRVERIGDSIRLIMPGNITFALNSDQI 120
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
F +L +A +L KF T + + TDS G+ + N +S+ RA + YL+ S
Sbjct: 121 APSFYSVLDSVAKVLVKFDQTELNVDGFTDSTGSFEYNQQLSERRAARVGDYLVS-SGIS 179
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I+ +G+ +YPI N T GR N+R+EI I
Sbjct: 180 RLRINAKGYGERYPIADNKTAAGRAQNRRVEINI 213
>gi|332704885|ref|ZP_08424973.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332555034|gb|EGJ52078.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 222
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 37/219 (16%)
Query: 2 IKELGLSMFI-----MTTISGCGLAS------------------------------REKK 26
+K++ + + + +GC ++
Sbjct: 1 MKKIAIKILLVCMCSALFAAGCTTDPYTGERQVSRTAIGAGAGAAAGAAGGAIFGGGDRG 60
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SE 85
K L + + G +D E + + +LQ TG+ V+R GDMI +P +V+F
Sbjct: 61 KRVLIGAGIGALAGGAVGGYMDYQESKLRQRLQGTGVSVTRQGDMIILNMPGNVTFDTGS 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
++ +F +L +A +L ++ T + + HTDS G++ N+ +SQ+RA + YLI +G
Sbjct: 121 AGIKPQFFEVLNSVAIVLKEYEKTYVDVLGHTDSTGSMNLNMRLSQDRAQSVAQYLISQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V RF+ VRG PI N T GR N+R+EI++ P
Sbjct: 181 VQQERFL-VRGMGPNQPIADNSTAAGRSQNRRVEIKLTP 218
>gi|149909453|ref|ZP_01898108.1| outer membrane protein [Moritella sp. PE36]
gi|149807563|gb|EDM67512.1| outer membrane protein [Moritella sp. PE36]
Length = 214
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 31/213 (14%)
Query: 1 MIKELGLSMFIMTTISGC----GLASREKKKVFLHKSNDTDIVNKRFGS----------- 45
M+K+ ++ I+ ++GC ++ + I G+
Sbjct: 1 MMKKTLTAIMIIAALTGCARQNATTGEQETNTATKSAIGGAIAGALIGASTGKKNAALFG 60
Query: 46 -------------SLDKAEDEFQMQLQDTGIVVSRIGDM--ITCYIPVHVSFVSEVFLEK 90
D+ E+E + +L +G+ V R+G+ + L
Sbjct: 61 ALGGAAIGGGIGHYFDRQEEELRQELIGSGVQVKRVGENELQLIMAKGIGFQTAGYNLSG 120
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L +A ILN++P + + I HTDS+G+ ++NL +S+ERA+ + + + +
Sbjct: 121 DIYSSLNSVAKILNEYPKSSLRIVGHTDSVGSAQSNLTLSEERAESVSE-YLNKRGIKSG 179
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S RG+ + PI +N+TK GR N+R+EI I
Sbjct: 180 RLSTRGYGERRPIASNETKSGRAANRRVEISIT 212
>gi|292490116|ref|YP_003533011.1| putative outer membrane lipoprotein yiaD [Erwinia amylovora
CFBP1430]
gi|292901121|ref|YP_003540490.1| outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291200969|emb|CBJ48108.1| putative outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291555558|emb|CBA24133.1| putative outer membrane lipoprotein yiaD precursor [Erwinia
amylovora CFBP1430]
Length = 221
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 97/220 (44%), Gaps = 37/220 (16%)
Query: 1 MIKELGLSMFIMT----TISGC-------------------------------GLASREK 25
M K+ +++ ++ ++GC + +++
Sbjct: 1 MKKKSVMTLALLLSGTVALTGCTTNPYTGEREAGKSGIGAGIGAALGAGVGMLSSSKKDR 60
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K L + + G +D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 GKGALIGATAGAALGGGAGYYMDVQEAKLRDKMKGTGVSVTRSGDNIVLNMPNNVTFDSS 120
Query: 86 V-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L+ L +A +L ++P T + + +TDS G+ + N+ +SQ+RAD + S LI +
Sbjct: 121 SSTLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSSGSRQLNMNLSQQRADGVGSALIAQ 180
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ + G P+ +N + G+ N+R+EI + P
Sbjct: 181 -GVAANRVRTNGMGPDNPVASNSSAEGKAQNRRVEITLSP 219
>gi|15804098|ref|NP_290137.1| putative outer membrane lipoprotein [Escherichia coli O157:H7
EDL933]
gi|15833691|ref|NP_312464.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. Sakai]
gi|26250192|ref|NP_756232.1| putative outer membrane lipoprotein [Escherichia coli CFT073]
gi|49176370|ref|YP_026228.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr.
MG1655]
gi|89110462|ref|AP_004242.1| predicted outer membrane lipoprotien [Escherichia coli str. K-12
substr. W3110]
gi|110643800|ref|YP_671530.1| putative outer membrane lipoprotein [Escherichia coli 536]
gi|157158823|ref|YP_001465027.1| putative outer membrane lipoprotein [Escherichia coli E24377A]
gi|157163027|ref|YP_001460345.1| putative outer membrane lipoprotein [Escherichia coli HS]
gi|168746904|ref|ZP_02771926.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113]
gi|168753370|ref|ZP_02778377.1| OmpA family protein [Escherichia coli O157:H7 str. EC4401]
gi|168759642|ref|ZP_02784649.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501]
gi|168765965|ref|ZP_02790972.1| OmpA family protein [Escherichia coli O157:H7 str. EC4486]
gi|168772488|ref|ZP_02797495.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196]
gi|168779701|ref|ZP_02804708.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076]
gi|168785422|ref|ZP_02810429.1| OmpA family protein [Escherichia coli O157:H7 str. EC869]
gi|168797388|ref|ZP_02822395.1| OmpA family protein [Escherichia coli O157:H7 str. EC508]
gi|170018219|ref|YP_001723173.1| putative outer membrane lipoprotein [Escherichia coli ATCC 8739]
gi|170083060|ref|YP_001732380.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr.
DH10B]
gi|170680831|ref|YP_001745838.1| putative outer membrane lipoprotein [Escherichia coli SMS-3-5]
gi|170766985|ref|ZP_02901438.1| OmpA family protein [Escherichia albertii TW07627]
gi|188495948|ref|ZP_03003218.1| OmpA family protein [Escherichia coli 53638]
gi|191165316|ref|ZP_03027159.1| OmpA family protein [Escherichia coli B7A]
gi|191170332|ref|ZP_03031885.1| OmpA family protein [Escherichia coli F11]
gi|193061844|ref|ZP_03042941.1| OmpA family protein [Escherichia coli E22]
gi|193068535|ref|ZP_03049497.1| OmpA family protein [Escherichia coli E110019]
gi|194427518|ref|ZP_03060067.1| OmpA family protein [Escherichia coli B171]
gi|194435666|ref|ZP_03067769.1| OmpA family protein [Escherichia coli 101-1]
gi|195935083|ref|ZP_03080465.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
EC4024]
gi|208808020|ref|ZP_03250357.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206]
gi|208812888|ref|ZP_03254217.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045]
gi|208819372|ref|ZP_03259692.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042]
gi|209400986|ref|YP_002273038.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115]
gi|209921016|ref|YP_002295100.1| putative outer membrane lipoprotein [Escherichia coli SE11]
gi|215488837|ref|YP_002331268.1| putative outer membrane lipoprotein [Escherichia coli O127:H6 str.
E2348/69]
gi|217326256|ref|ZP_03442340.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588]
gi|218556112|ref|YP_002389025.1| putative outer membrane lipoprotein [Escherichia coli IAI1]
gi|218691843|ref|YP_002400055.1| putative outer membrane lipoprotein [Escherichia coli ED1a]
gi|218697269|ref|YP_002404936.1| putative outer membrane lipoprotein [Escherichia coli 55989]
gi|218702317|ref|YP_002409946.1| putative outer membrane lipoprotein [Escherichia coli IAI39]
gi|218707187|ref|YP_002414706.1| putative outer membrane lipoprotein [Escherichia coli UMN026]
gi|227883718|ref|ZP_04001523.1| outer membrane lipoprotein [Escherichia coli 83972]
gi|238902640|ref|YP_002928436.1| putative outer membrane lipoprotein [Escherichia coli BW2952]
gi|254795509|ref|YP_003080346.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
TW14359]
gi|256020901|ref|ZP_05434766.1| putative outer membrane lipoprotein [Shigella sp. D9]
gi|256025721|ref|ZP_05439586.1| putative outer membrane lipoprotein [Escherichia sp. 4_1_40B]
gi|260846733|ref|YP_003224511.1| putative outer membrane lipoprotein [Escherichia coli O103:H2 str.
12009]
gi|260858052|ref|YP_003231943.1| putative outer membrane lipoprotein [Escherichia coli O26:H11 str.
11368]
gi|260870283|ref|YP_003236685.1| putative outer membrane lipoprotein [Escherichia coli O111:H- str.
11128]
gi|261224871|ref|ZP_05939152.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. FRIK2000]
gi|261254230|ref|ZP_05946763.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
FRIK966]
gi|291284929|ref|YP_003501747.1| Inner membrane lipoprotein yiaD precursor [Escherichia coli O55:H7
str. CB9615]
gi|293407175|ref|ZP_06651099.1| outer membrane lipoprotein [Escherichia coli FVEC1412]
gi|293417001|ref|ZP_06659638.1| outer membrane lipoprotein [Escherichia coli B185]
gi|293453862|ref|ZP_06664281.1| outer membrane lipoprotein [Escherichia coli B088]
gi|298382924|ref|ZP_06992519.1| outer membrane lipoprotein [Escherichia coli FVEC1302]
gi|300815222|ref|ZP_07095447.1| OmpA family protein [Escherichia coli MS 107-1]
gi|300822046|ref|ZP_07102189.1| OmpA family protein [Escherichia coli MS 119-7]
gi|300898736|ref|ZP_07117047.1| OmpA family protein [Escherichia coli MS 198-1]
gi|300920432|ref|ZP_07136866.1| OmpA family protein [Escherichia coli MS 115-1]
gi|300925626|ref|ZP_07141493.1| OmpA family protein [Escherichia coli MS 182-1]
gi|300937157|ref|ZP_07152011.1| OmpA family protein [Escherichia coli MS 21-1]
gi|300971377|ref|ZP_07171446.1| OmpA family protein [Escherichia coli MS 45-1]
gi|300976951|ref|ZP_07173686.1| OmpA family protein [Escherichia coli MS 200-1]
gi|301026191|ref|ZP_07189658.1| OmpA family protein [Escherichia coli MS 69-1]
gi|301028182|ref|ZP_07191452.1| OmpA family protein [Escherichia coli MS 196-1]
gi|301304604|ref|ZP_07210713.1| OmpA family protein [Escherichia coli MS 124-1]
gi|301646016|ref|ZP_07245922.1| OmpA family protein [Escherichia coli MS 146-1]
gi|307140242|ref|ZP_07499598.1| putative outer membrane lipoprotein [Escherichia coli H736]
gi|307314313|ref|ZP_07593920.1| OmpA/MotB domain protein [Escherichia coli W]
gi|309796193|ref|ZP_07690604.1| OmpA family protein [Escherichia coli MS 145-7]
gi|312968105|ref|ZP_07782316.1| inner membrane lipoprotein yiaD [Escherichia coli 2362-75]
gi|312972173|ref|ZP_07786347.1| inner membrane lipoprotein yiaD [Escherichia coli 1827-70]
gi|331644263|ref|ZP_08345392.1| inner membrane lipoprotein YiaD [Escherichia coli H736]
gi|331655189|ref|ZP_08356188.1| inner membrane lipoprotein YiaD [Escherichia coli M718]
gi|331659868|ref|ZP_08360806.1| inner membrane lipoprotein YiaD [Escherichia coli TA206]
gi|331665175|ref|ZP_08366076.1| inner membrane lipoprotein YiaD [Escherichia coli TA143]
gi|331670386|ref|ZP_08371225.1| inner membrane lipoprotein YiaD [Escherichia coli TA271]
gi|331675043|ref|ZP_08375800.1| inner membrane lipoprotein YiaD [Escherichia coli TA280]
gi|331679633|ref|ZP_08380303.1| inner membrane lipoprotein YiaD [Escherichia coli H591]
gi|331685215|ref|ZP_08385801.1| inner membrane lipoprotein YiaD [Escherichia coli H299]
gi|332282119|ref|ZP_08394532.1| OmpA family protein [Shigella sp. D9]
gi|54042327|sp|P37665|YIAD_ECOLI RecName: Full=Inner membrane lipoprotein yiaD; Flags: Precursor
gi|12518287|gb|AAG58701.1|AE005582_4 putative outer membrane protein [Escherichia coli O157:H7 str.
EDL933]
gi|26110621|gb|AAN82806.1|AE016768_224 Hypothetical lipoprotein yiaD precursor [Escherichia coli CFT073]
gi|13363911|dbj|BAB37860.1| putative outer membrane protein [Escherichia coli O157:H7 str.
Sakai]
gi|48994946|gb|AAT48190.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr.
MG1655]
gi|85676493|dbj|BAE77743.1| predicted outer membrane lipoprotien [Escherichia coli str. K12
substr. W3110]
gi|110345392|gb|ABG71629.1| putative outer membrane lipoprotein [Escherichia coli 536]
gi|157068707|gb|ABV07962.1| OmpA family protein [Escherichia coli HS]
gi|157080853|gb|ABV20561.1| OmpA family protein [Escherichia coli E24377A]
gi|169753147|gb|ACA75846.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739]
gi|169890895|gb|ACB04602.1| predicted outer membrane lipoprotein [Escherichia coli str. K-12
substr. DH10B]
gi|170124423|gb|EDS93354.1| OmpA family protein [Escherichia albertii TW07627]
gi|170518549|gb|ACB16727.1| OmpA family protein [Escherichia coli SMS-3-5]
gi|187771758|gb|EDU35602.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196]
gi|188018309|gb|EDU56431.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113]
gi|188491147|gb|EDU66250.1| OmpA family protein [Escherichia coli 53638]
gi|189002241|gb|EDU71227.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076]
gi|189358800|gb|EDU77219.1| OmpA family protein [Escherichia coli O157:H7 str. EC4401]
gi|189364720|gb|EDU83139.1| OmpA family protein [Escherichia coli O157:H7 str. EC4486]
gi|189369665|gb|EDU88081.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501]
gi|189374556|gb|EDU92972.1| OmpA family protein [Escherichia coli O157:H7 str. EC869]
gi|189380056|gb|EDU98472.1| OmpA family protein [Escherichia coli O157:H7 str. EC508]
gi|190904718|gb|EDV64424.1| OmpA family protein [Escherichia coli B7A]
gi|190909140|gb|EDV68726.1| OmpA family protein [Escherichia coli F11]
gi|192932634|gb|EDV85231.1| OmpA family protein [Escherichia coli E22]
gi|192958186|gb|EDV88627.1| OmpA family protein [Escherichia coli E110019]
gi|194414558|gb|EDX30831.1| OmpA family protein [Escherichia coli B171]
gi|194425209|gb|EDX41193.1| OmpA family protein [Escherichia coli 101-1]
gi|208727821|gb|EDZ77422.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206]
gi|208734165|gb|EDZ82852.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045]
gi|208739495|gb|EDZ87177.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042]
gi|209162386|gb|ACI39819.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115]
gi|209755238|gb|ACI75931.1| putative outer membrane protein [Escherichia coli]
gi|209755240|gb|ACI75932.1| putative outer membrane protein [Escherichia coli]
gi|209755242|gb|ACI75933.1| putative outer membrane protein [Escherichia coli]
gi|209755244|gb|ACI75934.1| putative outer membrane protein [Escherichia coli]
gi|209755246|gb|ACI75935.1| putative outer membrane protein [Escherichia coli]
gi|209914275|dbj|BAG79349.1| conserved hypothetical protein [Escherichia coli SE11]
gi|215266909|emb|CAS11352.1| predicted outer membrane lipoprotien [Escherichia coli O127:H6 str.
E2348/69]
gi|217322477|gb|EEC30901.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588]
gi|218354001|emb|CAV00488.1| putative outer membrane lipoprotien [Escherichia coli 55989]
gi|218362880|emb|CAR00514.1| putative outer membrane lipoprotien [Escherichia coli IAI1]
gi|218372303|emb|CAR20168.1| putative outer membrane lipoprotien [Escherichia coli IAI39]
gi|218429407|emb|CAR10226.1| putative outer membrane lipoprotien [Escherichia coli ED1a]
gi|218434284|emb|CAR15206.1| putative outer membrane lipoprotien [Escherichia coli UMN026]
gi|227839298|gb|EEJ49764.1| outer membrane lipoprotein [Escherichia coli 83972]
gi|238862715|gb|ACR64713.1| predicted outer membrane lipoprotein [Escherichia coli BW2952]
gi|254594909|gb|ACT74270.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. TW14359]
gi|257756701|dbj|BAI28203.1| predicted outer membrane lipoprotein [Escherichia coli O26:H11 str.
11368]
gi|257761880|dbj|BAI33377.1| predicted outer membrane lipoprotein [Escherichia coli O103:H2 str.
12009]
gi|257766639|dbj|BAI38134.1| predicted outer membrane lipoprotein [Escherichia coli O111:H- str.
11128]
gi|260447432|gb|ACX37854.1| OmpA/MotB domain protein [Escherichia coli DH1]
gi|284923586|emb|CBG36682.1| putative outer membrane protein [Escherichia coli 042]
gi|290764802|gb|ADD58763.1| Inner membrane lipoprotein yiaD precursor [Escherichia coli O55:H7
str. CB9615]
gi|291321988|gb|EFE61419.1| outer membrane lipoprotein [Escherichia coli B088]
gi|291425986|gb|EFE99020.1| outer membrane lipoprotein [Escherichia coli FVEC1412]
gi|291431577|gb|EFF04562.1| outer membrane lipoprotein [Escherichia coli B185]
gi|298276760|gb|EFI18278.1| outer membrane lipoprotein [Escherichia coli FVEC1302]
gi|299878738|gb|EFI86949.1| OmpA family protein [Escherichia coli MS 196-1]
gi|300308421|gb|EFJ62941.1| OmpA family protein [Escherichia coli MS 200-1]
gi|300357615|gb|EFJ73485.1| OmpA family protein [Escherichia coli MS 198-1]
gi|300395632|gb|EFJ79170.1| OmpA family protein [Escherichia coli MS 69-1]
gi|300411301|gb|EFJ94839.1| OmpA family protein [Escherichia coli MS 45-1]
gi|300412565|gb|EFJ95875.1| OmpA family protein [Escherichia coli MS 115-1]
gi|300418280|gb|EFK01591.1| OmpA family protein [Escherichia coli MS 182-1]
gi|300457770|gb|EFK21263.1| OmpA family protein [Escherichia coli MS 21-1]
gi|300525409|gb|EFK46478.1| OmpA family protein [Escherichia coli MS 119-7]
gi|300532114|gb|EFK53176.1| OmpA family protein [Escherichia coli MS 107-1]
gi|300840082|gb|EFK67842.1| OmpA family protein [Escherichia coli MS 124-1]
gi|301075768|gb|EFK90574.1| OmpA family protein [Escherichia coli MS 146-1]
gi|306906028|gb|EFN36548.1| OmpA/MotB domain protein [Escherichia coli W]
gi|307555658|gb|ADN48433.1| putative outer membrane protein [Escherichia coli ABU 83972]
gi|308120254|gb|EFO57516.1| OmpA family protein [Escherichia coli MS 145-7]
gi|310334550|gb|EFQ00755.1| inner membrane lipoprotein yiaD [Escherichia coli 1827-70]
gi|312287364|gb|EFR15273.1| inner membrane lipoprotein yiaD [Escherichia coli 2362-75]
gi|315062837|gb|ADT77164.1| predicted outer membrane lipoprotein [Escherichia coli W]
gi|315138128|dbj|BAJ45287.1| inner membrane lipoprotein yiaD precursor [Escherichia coli DH1]
gi|315254081|gb|EFU34049.1| OmpA family protein [Escherichia coli MS 85-1]
gi|315294130|gb|EFU53482.1| OmpA family protein [Escherichia coli MS 153-1]
gi|315300095|gb|EFU59333.1| OmpA family protein [Escherichia coli MS 16-3]
gi|315618412|gb|EFU98999.1| inner membrane lipoprotein yiaD [Escherichia coli 3431]
gi|320191391|gb|EFW66041.1| putative outer membrane protein [Escherichia coli O157:H7 str.
EC1212]
gi|320201426|gb|EFW76007.1| putative outer membrane protein [Escherichia coli EC4100B]
gi|320639873|gb|EFX09467.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
G5101]
gi|320645036|gb|EFX14060.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str.
493-89]
gi|320650303|gb|EFX18786.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str.
H 2687]
gi|320655878|gb|EFX23801.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661658|gb|EFX29073.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str.
USDA 5905]
gi|320666682|gb|EFX33665.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
LSU-61]
gi|323153881|gb|EFZ40115.1| inner membrane lipoprotein yiaD [Escherichia coli EPECa14]
gi|323160679|gb|EFZ46618.1| inner membrane lipoprotein yiaD [Escherichia coli E128010]
gi|323174210|gb|EFZ59838.1| inner membrane lipoprotein yiaD [Escherichia coli LT-68]
gi|323179484|gb|EFZ65051.1| inner membrane lipoprotein yiaD [Escherichia coli 1180]
gi|323182708|gb|EFZ68110.1| inner membrane lipoprotein yiaD [Escherichia coli 1357]
gi|323376572|gb|ADX48840.1| OmpA/MotB domain protein [Escherichia coli KO11]
gi|323934746|gb|EGB31133.1| OmpA family protein [Escherichia coli E1520]
gi|323939549|gb|EGB35757.1| OmpA family protein [Escherichia coli E482]
gi|323944551|gb|EGB40622.1| OmpA family protein [Escherichia coli H120]
gi|323959435|gb|EGB55094.1| OmpA family protein [Escherichia coli H489]
gi|323966022|gb|EGB61463.1| OmpA family protein [Escherichia coli M863]
gi|323971357|gb|EGB66598.1| OmpA family protein [Escherichia coli TA007]
gi|323975035|gb|EGB70144.1| OmpA family protein [Escherichia coli TW10509]
gi|324007339|gb|EGB76558.1| OmpA family protein [Escherichia coli MS 57-2]
gi|324014213|gb|EGB83432.1| OmpA family protein [Escherichia coli MS 60-1]
gi|324021134|gb|EGB90353.1| OmpA family protein [Escherichia coli MS 117-3]
gi|324116568|gb|EGC10485.1| OmpA family protein [Escherichia coli E1167]
gi|326337443|gb|EGD61278.1| putative outer membrane protein [Escherichia coli O157:H7 str.
1044]
gi|326339968|gb|EGD63775.1| putative outer membrane protein [Escherichia coli O157:H7 str.
1125]
gi|327251203|gb|EGE62896.1| inner membrane lipoprotein yiaD [Escherichia coli STEC_7v]
gi|331036557|gb|EGI08783.1| inner membrane lipoprotein YiaD [Escherichia coli H736]
gi|331047204|gb|EGI19282.1| inner membrane lipoprotein YiaD [Escherichia coli M718]
gi|331053083|gb|EGI25116.1| inner membrane lipoprotein YiaD [Escherichia coli TA206]
gi|331057685|gb|EGI29671.1| inner membrane lipoprotein YiaD [Escherichia coli TA143]
gi|331062448|gb|EGI34368.1| inner membrane lipoprotein YiaD [Escherichia coli TA271]
gi|331067952|gb|EGI39350.1| inner membrane lipoprotein YiaD [Escherichia coli TA280]
gi|331072805|gb|EGI44130.1| inner membrane lipoprotein YiaD [Escherichia coli H591]
gi|331077586|gb|EGI48798.1| inner membrane lipoprotein YiaD [Escherichia coli H299]
gi|332104471|gb|EGJ07817.1| OmpA family protein [Shigella sp. D9]
gi|332345519|gb|AEE58853.1| inner membrane lipoprotein YiaD [Escherichia coli UMNK88]
Length = 219
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC ++ + +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 181 VDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|332996878|gb|EGK16497.1| inner membrane lipoprotein yiaD [Shigella flexneri K-272]
gi|333013437|gb|EGK32809.1| inner membrane lipoprotein yiaD [Shigella flexneri K-227]
Length = 219
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC ++ + +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 F-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +G
Sbjct: 121 APLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 181 VDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|218660571|ref|ZP_03516501.1| outer membrane lipoprotein [Rhizobium etli IE4771]
Length = 196
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 2/161 (1%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV- 83
K+ L + + G+ +D+ E E + QL+ TGI V+R GD I +P +++F
Sbjct: 33 KRNAALIGAGIGALAGGAIGNYMDQQEAELRAQLEGTGISVTRNGDNIILNMPSNITFDV 92
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ ++ F P L +A +L KF T+I + HTDS G+L++N +SQ RA + +
Sbjct: 93 DQDAVKPGFYPTLNSVAIVLRKFNRTLIDVNGHTDSTGSLQHNQDLSQRRALSVAD-YLG 151
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +S GF P+ +N ++ GR N+R+EIQI P
Sbjct: 152 GQGIDQRRVSAVGFGPSQPVASNASEAGRAQNRRVEIQIAP 192
>gi|59801892|ref|YP_208604.1| hypothetical protein NGO1559 [Neisseria gonorrhoeae FA 1090]
gi|260439855|ref|ZP_05793671.1| hypothetical protein NgonDG_01984 [Neisseria gonorrhoeae DGI2]
gi|291043130|ref|ZP_06568853.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|59718787|gb|AAW90192.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|291012736|gb|EFE04719.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|307075938|emb|CBE70801.1| outer membrane protein A [Neisseria gonorrhoeae]
Length = 225
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + G A K + + + G +D E + L T I
Sbjct: 34 KSAMYGLGGAAVCGIVGALTHSGKGARNSALACGAIGAGVGGYMDYQEQRLRQNLAGTQI 93
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ R G+ I +P V+F L L A L ++P T + I HTD+ G+
Sbjct: 94 EIQRQGNQIRLVMPESVTFATGSAALGGSAQYALNTAAQTLVQYPDTTLTINGHTDNTGS 153
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL RGV+++R ++V G+ P+ +N T GR N+R+EI I
Sbjct: 154 DAVNNPLSQHRAQAVAYYLQTRGVAASR-LTVYGYGSHMPVASNATVEGRAQNRRVEILI 212
Query: 183 FP 184
P
Sbjct: 213 NP 214
>gi|194430954|ref|ZP_03063247.1| OmpA family protein [Shigella dysenteriae 1012]
gi|194420409|gb|EDX36485.1| OmpA family protein [Shigella dysenteriae 1012]
gi|332085980|gb|EGI91144.1| inner membrane lipoprotein yiaD [Shigella dysenteriae 155-74]
Length = 219
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
GLS + I + +++ K L + + G +D E + + +++ TG+ V
Sbjct: 40 GLSSLVGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSV 99
Query: 66 SRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L +A +L ++P T + + +TDS G
Sbjct: 100 TRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHD 159
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RAD + S LI +GV ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 160 LNMRLSQQRADSVASALITQGVDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|15964027|ref|NP_384380.1| hypothetical protein SMc00354 [Sinorhizobium meliloti 1021]
gi|15073203|emb|CAC41711.1| Probable porin [Sinorhizobium meliloti 1021]
Length = 221
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSN-----------------DTDIVNKRF 43
MIK+ + + +SGC + + + +R
Sbjct: 1 MIKKCAILAVVAVYLSGCTTTDPYTGEQKMSNTAGGALIGAGLGAATGLLVGGSAAGRRD 60
Query: 44 G----------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-V 86
+ +D+ E E + QLQ TG+ V+R GD I +P +++F ++
Sbjct: 61 AALVGAGIGALGGGLVGNYMDQQESELRAQLQGTGVSVTRAGDRIILNMPSNITFATDRD 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ F L +A +L KF T+I + HTDS G+ N +S+ RA + +YL R
Sbjct: 121 QVIPAFYSTLDSVAIVLRKFNKTLIDVDGHTDSTGSASYNQGLSERRAASVANYLASR-G 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +S G+ + PI +N T+VGR N+R+EI I P
Sbjct: 180 VDQRRMSAVGYGLERPIASNATEVGRAQNRRVEISIAP 217
>gi|260778449|ref|ZP_05887341.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260604613|gb|EEX30908.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 222
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSND-------------------TDIVNKR 42
+K++ L++ + +SGC R+ ++N D +R
Sbjct: 1 MKKMTLALAVAIALSGCQATQRQNATTGESETNSVTKGALLGALAGAAVGLATGDDATER 60
Query: 43 FG-----------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHV-SFV 83
D+ E + +L D+G+ V R+G + + + +
Sbjct: 61 RQHALIGAAGGAAVGGGVGYYFDQQEAALRKELLDSGVQVERVGENQLMLRMENGIGFQT 120
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L+ L+ +A IL ++P T + I+ HTDS G+ N ++S+ RA+ ++SYLI
Sbjct: 121 GSYNLDPSIHNTLRGVAKILVEYPDTSLVIEGHTDSTGSDTTNQVLSERRAESVRSYLIS 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV+S R I RG ++P+ TN+T GR N+R+EI+I P
Sbjct: 181 QGVASGRAI-ARGNGERFPLCTNNTSEGRACNRRVEIKILP 220
>gi|91213065|ref|YP_543051.1| putative outer membrane lipoprotein [Escherichia coli UTI89]
gi|117625836|ref|YP_859159.1| putative outer membrane lipoprotein [Escherichia coli APEC O1]
gi|218560629|ref|YP_002393542.1| outer membrane lipoprotein [Escherichia coli S88]
gi|306816094|ref|ZP_07450232.1| putative outer membrane lipoprotein [Escherichia coli NC101]
gi|331649382|ref|ZP_08350468.1| inner membrane lipoprotein YiaD [Escherichia coli M605]
gi|91074639|gb|ABE09520.1| putative outer membrane protein [Escherichia coli UTI89]
gi|115514960|gb|ABJ03035.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|218367398|emb|CAR05180.1| putative outer membrane lipoprotien [Escherichia coli S88]
gi|281180597|dbj|BAI56927.1| conserved hypothetical protein [Escherichia coli SE15]
gi|294489870|gb|ADE88626.1| OmpA family protein [Escherichia coli IHE3034]
gi|305850490|gb|EFM50947.1| putative outer membrane lipoprotein [Escherichia coli NC101]
gi|307628634|gb|ADN72938.1| putative outer membrane lipoprotein [Escherichia coli UM146]
gi|323949796|gb|EGB45680.1| OmpA family protein [Escherichia coli H252]
gi|330909615|gb|EGH38129.1| outer membrane protein A precursor [Escherichia coli AA86]
gi|331041880|gb|EGI14024.1| inner membrane lipoprotein YiaD [Escherichia coli M605]
Length = 219
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC ++ + +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G+ N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGSHDLNMRLSQQRADSVASALITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 181 VDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|332995852|gb|AEF05907.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Alteromonas sp. SN2]
Length = 202
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 24/199 (12%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS----------------------S 46
M ++GC +K + ++ K G
Sbjct: 1 MAASLAVAGCANDPSNSQKGAAIGAVMGALIGKATGDNDKSRYAWGAAVGAIAGGAIGGY 60
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNK 105
+DK E+ + +L DTG+ V R GD + +P ++F + F P+LQ +A ++N
Sbjct: 61 MDKQEEALRSELSDTGVQVVREGDNLRLIMPGDITFATDSSSISPNFNPVLQDVAKVVNN 120
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+ TV+ I+ HTD G+ + N +S+ RA +++ ++ ++ I+ G P
Sbjct: 121 YEKTVLMIKGHTDDTGSEQYNQGLSERRAGAVRN-VLLNYSVNSTRITTVGMGEYQPKVP 179
Query: 166 NDTKVGRQNNQRIEIQIFP 184
NDT R N+R+E++I P
Sbjct: 180 NDTAANRSMNRRVELEIQP 198
>gi|59713511|ref|YP_206286.1| outer membrane lipoprotein [Vibrio fischeri ES114]
gi|197337177|ref|YP_002157921.1| inner membrane lipoprotein YiaD [Vibrio fischeri MJ11]
gi|59481759|gb|AAW87398.1| predicted outer membrane lipoprotein [Vibrio fischeri ES114]
gi|197314429|gb|ACH63878.1| inner membrane lipoprotein YiaD [Vibrio fischeri MJ11]
Length = 222
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGC-------GLASREKKKVFLHKSNDTDIVNKRFG---------- 44
+K++ +++ ++ +++GC + + G
Sbjct: 1 MKKITIALALLISLTGCQATQRQNATTGESETNSATKGVLAGALAGVAIGLATGDNAKER 60
Query: 45 -------------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVS 84
D+ E + +L+ +G+ V R+G + + + + F S
Sbjct: 61 RKNALIGAAAGGAVGGGVGYYFDQQEKALRNELKSSGVQVERVGKNELKLVMDNGIGFQS 120
Query: 85 EVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L+ L +A IL ++P T + I HTDS G N +S++RAD +++YLI+
Sbjct: 121 SSYQLDASIYNTLNGVARILVEYPDTALQIDGHTDSSGNATKNQTLSEQRADSVRTYLIK 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ V++ R ++ RG+ +YP+ N TK GR N+R+EI I P
Sbjct: 181 QDVAAGR-VNARGYGARYPVCDNSTKQGRACNRRVEITILP 220
>gi|291615624|ref|YP_003518366.1| YiaD [Pantoea ananatis LMG 20103]
gi|291150654|gb|ADD75238.1| YiaD [Pantoea ananatis LMG 20103]
Length = 237
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
GL + + + +++ K L + + G +D E + + +++ TG+ V
Sbjct: 57 GLGALVGAGVGVLSSSKKDRGKGALIGAASGAALGGGVGYYMDVQEAKLRDKMKGTGVSV 116
Query: 66 SRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L +A +L ++P T + + HTDS G+
Sbjct: 117 TRQGDNIVLNMPNNVTFDSSSSSLKPAGANTLTGVAMVLKEYPKTAVNVVGHTDSTGSRA 176
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RA+ + S LI + + + +G P+ TN T+ G+ N+R+EI + P
Sbjct: 177 LNMRLSQQRAESVASALIVQ-GVAGNRLHTQGAGPDSPVATNSTEAGKAQNRRVEITLSP 235
>gi|154250728|ref|YP_001411552.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans
DS-1]
gi|154154678|gb|ABS61895.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1]
Length = 224
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 93/164 (56%), Gaps = 2/164 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S ++++ + + + G +DK E E +L+ +G+ V+R+G+ I +P +V+
Sbjct: 58 STDRRQRAMIGAGIGALAGGGVGYYMDKQEAELTQRLRASGVSVTRVGNDIILNMPGNVT 117
Query: 82 F-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F + + KF +L +A +L ++ T+I + HTDS G+ + NL +SQ+RA + SY
Sbjct: 118 FATNSSDINAKFYDVLNSVAIVLKEYDKTLIDVTGHTDSTGSDQYNLELSQKRAQSVASY 177
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
LI + V +R + G PI TNDT GR+ N+R+EI++ P
Sbjct: 178 LIGQSVD-SRRFYIVGAGESQPIATNDTPQGREQNRRVEIRLSP 220
>gi|332996326|gb|EGK15953.1| inner membrane lipoprotein yiaD [Shigella flexneri VA-6]
Length = 219
Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFG---------- 44
M K + L + +SGC ++ + +V G
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGVLSSSKKDRG 60
Query: 45 ------------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 F-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +G
Sbjct: 121 APLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 181 VDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|94496613|ref|ZP_01303189.1| OmpA/MotB [Sphingomonas sp. SKA58]
gi|94423973|gb|EAT08998.1| OmpA/MotB [Sphingomonas sp. SKA58]
Length = 226
Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILN 104
+D E + + + TG+ V R GD + +P ++F ++ +F P L +A++L
Sbjct: 80 YMDAQERKLREETAGTGVDVIRDGDNLLLRMPSGITFGYDRADVQPQFQPTLNDVASVLA 139
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
++P T I + HTDS G+ N +S+ RA + +YL+ R + I RGF PI
Sbjct: 140 QYPKTYIDVYGHTDSDGSDAYNQTLSERRAQAVANYLVGR-GVQSARIGTRGFGETQPIA 198
Query: 165 TNDTKVGRQNNQRIEIQIFP 184
+N T+ G+ N+R+EI+I P
Sbjct: 199 SNATEEGKAANRRVEIKIAP 218
>gi|307301173|ref|ZP_07580935.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
gi|307321074|ref|ZP_07600479.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
gi|306893246|gb|EFN24027.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
gi|306903629|gb|EFN34216.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
Length = 227
Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSN-----------------DTDIVNKRF 43
MIK+ + + +SGC + + + +R
Sbjct: 7 MIKKCAILAVVAVYLSGCTTTDPYTGEQKMSNTAGGALIGAGLGAATGLLVGGSAAGRRD 66
Query: 44 G----------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-V 86
+ +D+ E E + QLQ TG+ V+R GD I +P +++F ++
Sbjct: 67 AALVGAGIGALGGGLVGNYMDQQESELRAQLQGTGVSVTRAGDRIILNMPSNITFATDRD 126
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ F L +A +L KF T+I + HTDS G+ N +S+ RA + +YL R
Sbjct: 127 QVIPAFYSTLDSVAIVLRKFNKTLIDVDGHTDSTGSASYNQGLSERRAASVANYLASR-G 185
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +S G+ + PI +N T+VGR N+R+EI I P
Sbjct: 186 VDQRRMSAVGYGLERPIASNATEVGRAQNRRVEISIAP 223
>gi|304391383|ref|ZP_07373325.1| inner membrane lipoprotein YiaD [Ahrensia sp. R2A130]
gi|303295612|gb|EFL89970.1| inner membrane lipoprotein YiaD [Ahrensia sp. R2A130]
Length = 219
Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 2 IKELGL-SMFIMTTISGCGL---------------------------------ASREKKK 27
+K + L + +S C + +K
Sbjct: 1 MKNMILPVLLAAGLVSACTTDPYTGQQKVSNTAIGVGGGAALGALGGLIVGKTTGADTRK 60
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV 86
L + I G D E + + +LQ+TG+ VSR+G+ I +P +++F
Sbjct: 61 AVLIGAGIGAIGGGGVGLYQDNQEAKLRAELQNTGVSVSRVGNDIVLNMPSNITFNSGSA 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
L+ +F +L +A +L ++ T++ + HTDS G+ + N +S+ R + YL+Q+
Sbjct: 121 DLKAQFFRVLNSVALVLKEYNKTLVNVSGHTDSDGSDQFNQQLSERRGVNVAQYLVQQ-G 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +R V G+ + PI +N + G++ N+R+EI++ P
Sbjct: 180 TDSRRYYVVGYGEERPIASNASAAGKEQNRRVEIRLSP 217
>gi|293412987|ref|ZP_06655655.1| conserved hypothetical protein [Escherichia coli B354]
gi|291468634|gb|EFF11127.1| conserved hypothetical protein [Escherichia coli B354]
Length = 219
Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC ++ + +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V + R I +G PI +N T G+ N+R+EI + P
Sbjct: 181 VDAGR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|283787805|ref|YP_003367670.1| outer membrane protein [Citrobacter rodentium ICC168]
gi|282951259|emb|CBG90953.1| putative outer membrane protein [Citrobacter rodentium ICC168]
Length = 220
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
G+ + I + +++ K L + + G +D E + + ++Q TG+ V
Sbjct: 40 GIGSLVGAGIGALSSSKKDRGKGALIGAAAGAALGGGAGYYMDVQEAKLRDKMQGTGVSV 99
Query: 66 SRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L +A +L ++P T + + +TDS G
Sbjct: 100 TRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGQD 159
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RAD + S LI +GV + R I G PI +N T G+ N+R+EI + P
Sbjct: 160 LNMRLSQQRADSVASALITQGVEAGR-IRTSGMGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|295691294|ref|YP_003594987.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295433197|gb|ADG12369.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
Length = 224
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 37/221 (16%)
Query: 1 MIKELGLSMFI--MTTISGCGLAS----------------------------------RE 24
M ++ L+ + + C +
Sbjct: 1 MTRKFALAAVLVGAGALVACTTTDPYTGMPVRNNTGTGVLAGAGAGALLGYLTNTNKGEQ 60
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV- 83
+K L + + G+ +D+ + +F+ L+ +G+++ R GD I +P V+F
Sbjct: 61 GRKNALIGAGIGALAGGAVGNYMDRQQADFRRSLEGSGVMIRRNGDQIVLVMPSDVTFDV 120
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
++ +F+ +L +A LN +P T I + H DS G + N ++S+ RA + YL
Sbjct: 121 DRSDIQPRFVRVLDDVARTLNAYPQTTIDVVGHADSSGADEYNQVLSERRASAVAGYLTS 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+G + V G + PI N T GR N+R+EI + P
Sbjct: 181 QGRVLPDRVFVAGMGERQPIADNSTAAGRAENRRVEIVLRP 221
>gi|110807356|ref|YP_690876.1| putative outer membrane lipoprotein [Shigella flexneri 5 str. 8401]
gi|229088112|ref|NP_709330.3| putative outer membrane lipoprotein [Shigella flexneri 2a str. 301]
gi|229089132|ref|NP_839340.2| putative outer membrane lipoprotein [Shigella flexneri 2a str.
2457T]
gi|110616904|gb|ABF05571.1| putative outer membrane protein [Shigella flexneri 5 str. 8401]
gi|281602912|gb|ADA75896.1| putative outer membrane protein [Shigella flexneri 2002017]
gi|313647591|gb|EFS12041.1| inner membrane lipoprotein yiaD [Shigella flexneri 2a str. 2457T]
gi|332750012|gb|EGJ80424.1| inner membrane lipoprotein yiaD [Shigella flexneri K-671]
gi|332750169|gb|EGJ80580.1| inner membrane lipoprotein yiaD [Shigella flexneri 4343-70]
gi|332751243|gb|EGJ81646.1| inner membrane lipoprotein yiaD [Shigella flexneri 2747-71]
gi|332997456|gb|EGK17072.1| inner membrane lipoprotein yiaD [Shigella flexneri K-218]
gi|333012432|gb|EGK31813.1| inner membrane lipoprotein yiaD [Shigella flexneri K-304]
Length = 216
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
GL + I + +++ K L + + G +D E + + +++ TG+ V
Sbjct: 37 GLGSLVGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSV 96
Query: 66 SRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L +A +L ++P T + + +TDS G
Sbjct: 97 TRSGDNIILNMPNNVTFDSSSAPLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHD 156
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RAD + S LI +GV ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 157 LNMRLSQQRADSVASALITQGVDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 215
>gi|30043431|gb|AAP19151.1| putative outer membrane protein [Shigella flexneri 2a str. 2457T]
gi|56383924|gb|AAN45037.2| putative outer membrane protein [Shigella flexneri 2a str. 301]
gi|332763439|gb|EGJ93678.1| ompA family protein [Shigella flexneri 2930-71]
Length = 208
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
GL + I + +++ K L + + G +D E + + +++ TG+ V
Sbjct: 29 GLGSLVGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSV 88
Query: 66 SRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L +A +L ++P T + + +TDS G
Sbjct: 89 TRSGDNIILNMPNNVTFDSSSAPLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHD 148
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RAD + S LI +GV ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 149 LNMRLSQQRADSVASALITQGVDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 207
>gi|315180390|gb|ADT87304.1| lipoprotein, hypothetical [Vibrio furnissii NCTC 11218]
Length = 222
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD------------------------ 37
+K++ L++ ++ +SGC R+ ++N
Sbjct: 1 MKKITLALAVLIALSGCAATQRQNATTGETETNSATKGALLGALAGAAVGLASGDDAKER 60
Query: 38 ------------IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVS 84
V G D+ E + +L ++G+ V R+G + + + + F +
Sbjct: 61 RQRALIGAAGGAAVGGGVGYYFDQQEAALRQELLNSGVQVERVGENQLVLRMQNGIGFQT 120
Query: 85 EVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L+ L+ +A IL ++P T + I HTDS G+ N ++S+ RA+ ++S+L+
Sbjct: 121 NSYQLDSSIHNTLRGVAKILVEYPDTSLVIDGHTDSTGSDTTNQILSERRAESVRSFLLS 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV++ R I RG +YP+ TN T GR N+R+EIQI P
Sbjct: 181 QGVAAGRAI-ARGNGERYPLCTNSTADGRSCNRRVEIQILP 220
>gi|120555732|ref|YP_960083.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
gi|120325581|gb|ABM19896.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 236
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 35/216 (16%)
Query: 3 KELGLSMFIMTT-ISGC--------------------------------GLASREKKKVF 29
K+ L+ + T +SGC +S ++ K
Sbjct: 20 KKTILAFAVATVGLSGCMTYDPYTGEEKTSNATKGSIIGAIGGAAIGAATSSSSDRGKGA 79
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFL 88
L + V G +D+ E + + +L+ TG+ V R GD I +P +++F + +
Sbjct: 80 LIGAAGGAAVGGGIGYYMDRQEAQLRQKLEGTGVRVVRNGDQIDLIMPGNITFDTDQSTI 139
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
F L+ +A +L +F T+I I+ HTDS G+ N L+S+ RA ++ +L+ +
Sbjct: 140 RSGFTGTLESVALVLKEFDKTIIQIEGHTDSTGSDSYNQLLSERRASSVRDFLLNQ-GIE 198
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R G+ +YPI +NDT GR+ N+R+E+ + P
Sbjct: 199 PRRTRATGYGERYPIASNDTAAGREQNRRVELTLVP 234
>gi|323497435|ref|ZP_08102453.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
gi|323317518|gb|EGA70511.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
Length = 222
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG----------------- 44
+K++ L++ + +SGC R+ ++N T
Sbjct: 1 MKKITLALAVAIALSGCQATQRQNATTGESETNSTTTGAIIGALAGAAVGVATGDDAKDR 60
Query: 45 -------------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVS 84
DK E+ + +L ++G+ V R+G + + + + F +
Sbjct: 61 RKRALIGATGGAVVGGGVGYYFDKQEEALRQELLNSGVQVERVGENQLLLRLENGIGFAT 120
Query: 85 EV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L+ L +A IL ++P T + I TDS G+ N L+S+ RA+ ++SYL+
Sbjct: 121 ASHTLDSGIRNTLNGVARILVEYPDTSLVIDGFTDSTGSDTTNQLLSERRAESVRSYLVS 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV++ R I RG ++P+ TN T GR N+R+EIQI P
Sbjct: 181 QGVAAGRAI-ARGNGERHPLCTNSTAEGRACNRRVEIQILP 220
>gi|92115424|ref|YP_575352.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
gi|91798514|gb|ABE60653.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
Length = 226
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G S ++ L + + G+ +D E++ + L TGI V R GD I +P
Sbjct: 56 GDGSTSRRDRALIGAAAGAAIGGGVGAYMDAQEEKLRRDLDGTGIGVDRQGDNIVLNMPS 115
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V+F L+ L ++ ++P T I + +TDS G+ N +S+ RA +
Sbjct: 116 SVTFDVDSSALKTPARQALNDATAVMREYPKTRINVAGYTDSTGSADYNQRLSERRAQAV 175
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +G + I+ G+ + P+ +NDT+ GR N+R+EI + P
Sbjct: 176 AD-YLGQGGIAANRINTVGYGERQPVASNDTESGRAQNRRVEITLTP 221
>gi|254038735|ref|ZP_04872791.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|226839241|gb|EEH71264.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|309703955|emb|CBJ03298.1| putative outer membrane protein [Escherichia coli ETEC H10407]
Length = 219
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC ++ ++ +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGASLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 181 VDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|16124456|ref|NP_419020.1| OmpA family protein [Caulobacter crescentus CB15]
gi|221233140|ref|YP_002515576.1| outer membrane protein [Caulobacter crescentus NA1000]
gi|13421324|gb|AAK22188.1| OmpA family protein [Caulobacter crescentus CB15]
gi|220962312|gb|ACL93668.1| outer membrane protein [Caulobacter crescentus NA1000]
Length = 226
Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 80/215 (37%), Gaps = 35/215 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-------------------- 44
L + + ++ C + + + G
Sbjct: 10 LAVVLMSAGALAACTTTDPYTGMPVRNNTGTGALTGAGVGAVLGYLTNTNKGEQGRKNAL 69
Query: 45 --------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLE 89
+ +D+ + +F+ L+ +G+++ R GD I +P V+F ++
Sbjct: 70 IGAGIGALAGGAIGNYMDRQQADFRRSLEGSGVMIRRNGDQIVLVMPSDVTFAVDRSDVQ 129
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
F +L +A LN +P T I + H DS G N +S+ RA + YL G
Sbjct: 130 PPFTRVLDDVARTLNAYPQTTIDVVGHADSSGPDDYNQTLSERRASAVAGYLTGPGGVLV 189
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ V G + PI N T GR N+R+EI + P
Sbjct: 190 DRVFVAGMGERAPIADNATADGRAQNRRVEIILRP 224
>gi|268595437|ref|ZP_06129604.1| ompA family protein [Neisseria gonorrhoeae 35/02]
gi|268597225|ref|ZP_06131392.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268599401|ref|ZP_06133568.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae MS11]
gi|268601994|ref|ZP_06136161.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID18]
gi|268604326|ref|ZP_06138493.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID1]
gi|268682782|ref|ZP_06149644.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID332]
gi|268684809|ref|ZP_06151671.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae
SK-92-679]
gi|268687209|ref|ZP_06154071.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae
SK-93-1035]
gi|268548826|gb|EEZ44244.1| ompA family protein [Neisseria gonorrhoeae 35/02]
gi|268551013|gb|EEZ46032.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268583532|gb|EEZ48208.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae MS11]
gi|268586125|gb|EEZ50801.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID18]
gi|268588457|gb|EEZ53133.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID1]
gi|268623066|gb|EEZ55466.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID332]
gi|268625093|gb|EEZ57493.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae
SK-92-679]
gi|268627493|gb|EEZ59893.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae
SK-93-1035]
Length = 216
Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + G A K + + + G +D E + L T I
Sbjct: 25 KSAMYGLGGAAVCGIVGALTHSGKGARNSALACGAIGAGVGGYMDYQEQRLRQNLAGTQI 84
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ R G+ I +P V+F L L A L ++P T + I HTD+ G+
Sbjct: 85 EIQRQGNQIRLVMPESVTFATGSAALGGSAQYALNTAAQTLVQYPDTTLTINGHTDNTGS 144
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL RGV+++R ++V G+ P+ +N T GR N+R+EI I
Sbjct: 145 DAVNNPLSQHRAQAVAYYLQTRGVAASR-LTVYGYGSHMPVASNATVEGRAQNRRVEILI 203
Query: 183 FP 184
P
Sbjct: 204 NP 205
>gi|294782159|ref|ZP_06747485.1| OmpA family protein [Fusobacterium sp. 1_1_41FAA]
gi|294480800|gb|EFG28575.1| OmpA family protein [Fusobacterium sp. 1_1_41FAA]
Length = 212
Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + ++ +G+ D E + L+ T V G+ + +P V+F
Sbjct: 49 GKDTKGTLIGAAVGSLLGMGWGAYKDNQARELKAALKGTQAEVRNDGNALVVNLPGGVTF 108
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L +A L ++P T I + +TDS G +N +SQ RA+ + YL
Sbjct: 109 ASDSANISSGFYSALNGVAQTLVRYPETRIQVNGYTDSTGGDAHNQELSQRRANSVAQYL 168
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I + S+ I GF PI +N T GRQ N+R+E++I P
Sbjct: 169 ISQ-GVSSNRIVANGFGSLNPIASNATPEGRQANRRVEVRILP 210
>gi|222035267|emb|CAP78012.1| Inner membrane lipoprotein yiad [Escherichia coli LF82]
gi|312948118|gb|ADR28945.1| putative outer membrane lipoprotein [Escherichia coli O83:H1 str.
NRG 857C]
gi|320193935|gb|EFW68568.1| Outer membrane protein A precursor [Escherichia coli WV_060327]
Length = 219
Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC ++ + +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G+ N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGSHDLNMRLSQQRADSVASALITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 181 VDASR-IRTQGLGPANPIASNSTSEGKAQNRRVEITLSP 218
>gi|114562313|ref|YP_749826.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114333606|gb|ABI70988.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 225
Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 5/183 (2%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
GLS + + + ++ K L + + G +D E E + QL+ TG+ V
Sbjct: 47 GLSGAAIGVL---SSSKSDRGKGALIGAASGAALGGGIGYYMDVQEAELRKQLKSTGVSV 103
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P V+F + L + +L + + ++ T + + +TDS G+
Sbjct: 104 TRNGDNIVLNMPNEVTFAVDQTVLSSRAKSVLNSVVLVAKEYDDTRLNVIGYTDSSGSDS 163
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
NL +SQ RA + Y+ + VS +R S G PI +N T+ GR N+R+EI + P
Sbjct: 164 YNLRLSQVRASEVAQYMTSQKVSGSRVSST-GMGESSPIASNSTEQGRSQNRRVEIVLTP 222
Query: 185 RGN 187
G
Sbjct: 223 MGK 225
>gi|268316295|ref|YP_003290014.1| OmpA/MotB domain-containing protein [Rhodothermus marinus DSM 4252]
gi|262333829|gb|ACY47626.1| OmpA/MotB domain protein [Rhodothermus marinus DSM 4252]
Length = 209
Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 77/206 (37%), Gaps = 28/206 (13%)
Query: 10 FIMTTISGCG------------------------LASREKKKVFLHKSNDTDIVNKRFGS 45
+ ++GC A+ + + + G
Sbjct: 1 MLALLLAGCARLSNTEKGAAVGAGAGAVVGGAIGKATGNTARGAILGAIVGGTAGAIIGQ 60
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILN 104
+D+ E Q +L D + R+G+ I + F L + L+ +A L
Sbjct: 61 RMDRQAAEMQQELPD--ARIERVGEGILVTFDSGILFDFDSATLRPEAREKLRRLAESLK 118
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
K+P T + I HTDS G + N +S+ RA+ + + + I G PI
Sbjct: 119 KYPETEVLIVGHTDSTGPEEYNQRLSERRAEA-AAAFLMQQGIRPSRIRTMGKGETEPIA 177
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNIKK 190
+N T+ GRQ N+R+EI IF +K
Sbjct: 178 SNATEEGRQLNRRVEIAIFASEAYRK 203
>gi|238798361|ref|ZP_04641844.1| Inner membrane lipoprotein yiaD [Yersinia mollaretii ATCC 43969]
gi|238717819|gb|EEQ09652.1| Inner membrane lipoprotein yiaD [Yersinia mollaretii ATCC 43969]
Length = 219
Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats.
Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 36/219 (16%)
Query: 1 MIKELGL---SMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFG---------- 44
M K + ++ + T+S C + + ++ G
Sbjct: 1 MKKRILATVTALTLALTLSACTTNPYTGESQAGKSGYGAGIGAVLGAGIGMLSSSKHDRG 60
Query: 45 ------------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SE 85
+D E + + ++ TG+ V+R GD I +P +V+F
Sbjct: 61 KGALIGAAAGAALGGGAGYYMDVQEAKLREKMSGTGVSVTRQGDNIVLNMPNNVTFDTDS 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++ T + + TDS G +N+ +SQ+RAD + S LI +
Sbjct: 121 SNLKPAGANTLTGVAMVLKEYDKTAVNVTGFTDSSGARAHNMTLSQQRADSVGSALIVQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I G P+ +N T G+ N+R+EI + P
Sbjct: 180 GVAANRIRTSGAGPDNPVASNSTAAGKAQNRRVEITLSP 218
>gi|319783265|ref|YP_004142741.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169153|gb|ADV12691.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 216
Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNK 105
+D+ E E + QL+ TG+ V+R GD I +P ++F + ++ F +L +A +L K
Sbjct: 77 MDQNEAELRRQLEGTGVSVTRSGDQIILNMPSDITFNSDQDAVKPGFYQVLNSVALVLKK 136
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
F T + + HTDS G ++N +SQ RA + + + R +V GF P+ +
Sbjct: 137 FKQTTVDVFGHTDSTGGDQHNFDLSQRRALAVAN-YLSGQGVDQRRFAVTGFGKTRPVAS 195
Query: 166 NDTKVGRQNNQRIEIQIFP 184
N T GR N+R+EIQ+ P
Sbjct: 196 NATAEGRAQNRRVEIQLSP 214
>gi|218673547|ref|ZP_03523216.1| outer membrane lipoprotein [Rhizobium etli GR56]
Length = 180
Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL 103
+ +D+ E E + QL+ TGI V+R GD I +P +++F + ++ F P L +A +L
Sbjct: 37 NYMDQQEAELRAQLEGTGISVTRNGDNIILNMPSNITFDVDQDAVKPGFYPTLNSVAIVL 96
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
KF T+I + HTDS G+L++N +SQ RA + + R +S GF P+
Sbjct: 97 RKFNRTLIDVNGHTDSTGSLQHNQDLSQRRALSVAD-YLGGQGIDQRRVSAVGFGPSQPV 155
Query: 164 DTNDTKVGRQNNQRIEIQIFP 184
+N ++ GR N+R+EIQI P
Sbjct: 156 ASNASEAGRAQNRRVEIQIAP 176
>gi|301047095|ref|ZP_07194195.1| OmpA family protein [Escherichia coli MS 185-1]
gi|300300982|gb|EFJ57367.1| OmpA family protein [Escherichia coli MS 185-1]
Length = 219
Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC ++ + +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANPLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALIPQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 181 VDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|260768688|ref|ZP_05877622.1| outer membrane protein [Vibrio furnissii CIP 102972]
gi|260616718|gb|EEX41903.1| outer membrane protein [Vibrio furnissii CIP 102972]
Length = 229
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD----------------------- 37
++K++ L++ ++ +SGC R+ ++N
Sbjct: 7 VLKKITLALAVLIALSGCAATQRQNATTGETETNSATKGALLGALAGAAVGLASGDDAKE 66
Query: 38 -------------IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFV 83
V G D+ E + +L ++G+ V R+G + + + + F
Sbjct: 67 RRQRALIGAAGGAAVGGGVGYYFDQQEAALRQELLNSGVQVERVGENQLVLRMQNGIGFQ 126
Query: 84 SEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ + L+ L+ +A IL ++P T + I HTDS G+ N ++S+ RA+ ++S+L+
Sbjct: 127 TNSYQLDSSIHNTLRGVAKILVEYPDTSLVIDGHTDSTGSDTTNQILSERRAESVRSFLL 186
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV++ R I RG +YP+ TN T GR N+R+EIQI P
Sbjct: 187 SQGVAAGRAI-ARGNGERYPLCTNSTADGRSCNRRVEIQILP 227
>gi|218550833|ref|YP_002384624.1| outer membrane lipoprotein [Escherichia fergusonii ATCC 35469]
gi|218358374|emb|CAQ91021.1| putative outer membrane lipoprotien [Escherichia fergusonii ATCC
35469]
gi|324111886|gb|EGC05866.1| OmpA family protein [Escherichia fergusonii B253]
gi|325499107|gb|EGC96966.1| outer membrane lipoprotein [Escherichia fergusonii ECD227]
Length = 219
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGL---ASREKKKVFLHKSNDTDIVNKRFGS--------- 45
M K + L I +SGC + + +V G+
Sbjct: 1 MKKRVYLIAAIVSGALAVSGCTTNPYTGEREAGNSAIGAGLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-E 85
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSNS 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVLGYTDSTGGYDLNMRLSQQRADSVASALITQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I+ RG PI +N T G+ N+R+EI + P
Sbjct: 180 GVAANRINTRGMGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|254494341|ref|ZP_05107512.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|226513381|gb|EEH62726.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
Length = 216
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 2/182 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + G A K + + + G +D E + L DT I
Sbjct: 25 KSAMYGLGGAAVCGIVGALTHSGKGARNSALACGAIGAGVGGYMDYQEQRLRQNLADTQI 84
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ R G+ I +P V+F L L A L ++P T + I HTD+ G+
Sbjct: 85 EIQRQGNQIRLVMPESVTFATGSAALGGSAQYALNTAAQTLVQYPDTTLTINGHTDNTGS 144
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL RGV+++R ++V G+ P+ +N T GR N+R+EI I
Sbjct: 145 DAVNNPLSQHRAQAVAYYLQTRGVAASR-LTVYGYGSHMPVASNATVEGRAQNRRVEILI 203
Query: 183 FP 184
P
Sbjct: 204 NP 205
>gi|82545917|ref|YP_409864.1| outer membrane lipoprotein [Shigella boydii Sb227]
gi|187734257|ref|YP_001882255.1| putative outer membrane lipoprotein [Shigella boydii CDC 3083-94]
gi|81247328|gb|ABB68036.1| putative outer membrane protein [Shigella boydii Sb227]
gi|187431249|gb|ACD10523.1| OmpA family protein [Shigella boydii CDC 3083-94]
gi|320187083|gb|EFW61791.1| Outer membrane protein A precursor [Shigella flexneri CDC 796-83]
gi|332089323|gb|EGI94427.1| inner membrane lipoprotein yiaD [Shigella boydii 3594-74]
Length = 219
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC ++ + +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLDSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 181 VDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|119776228|ref|YP_928968.1| OmpA family protein [Shewanella amazonensis SB2B]
gi|119768728|gb|ABM01299.1| OmpA family protein [Shewanella amazonensis SB2B]
Length = 222
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 38/223 (17%)
Query: 1 MIKELGLSMFIMTTIS----GCGLA--------------------------------SRE 24
M K+ L++ + ++ GC +
Sbjct: 1 MNKKAILTLTGVFALAAMGTGCSTVNPYTNEQQTANATTGAIIGAVAGAAVGVASSSKSD 60
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV- 83
+ K L + V G +D E + + QLQ +G+ V+R GD I +P V+F
Sbjct: 61 RGKGALIGAASGAAVGGGIGYYMDVQETKLRQQLQASGVSVTRNGDNIILNMPNDVTFAV 120
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L + + +L +A + ++ T + + +TDS G NL +SQ RA + +YL+
Sbjct: 121 DKTDLSPRAMQVLDSVALVAKEYSKTRLNVLGYTDSSGADSYNLRLSQVRASEVGNYLLS 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+GV++ R +S +G PI +N T GR N+R+EI + P G
Sbjct: 181 KGVAAAR-VSTQGMGEASPIASNATAEGRAQNRRVEIILTPIG 222
>gi|114778645|ref|ZP_01453461.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1]
gi|114551110|gb|EAU53671.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1]
Length = 226
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 50/227 (22%), Positives = 86/227 (37%), Gaps = 39/227 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS--------------- 45
M + + L + T++ C + K K+ + G+
Sbjct: 1 MNRIIILGVAAGLTLTACVSDPNDPNKNTKEKAAVGATIGALAGAVIGYQGDHSGGALRG 60
Query: 46 -----------------SLDKAEDEFQMQLQDTG----IVVSR-IGDMITCYIPVHV-SF 82
+DK + EF QL I V R + + + +
Sbjct: 61 ALIGGAAGGALGAGVGIYMDKQQAEFNRQLAAEQQAHQIEVERLQNENLKITMNSEISFD 120
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ L+ F L +A IL ++P + I I HTD+ G+ + N +S++RA + + +
Sbjct: 121 YNSAQLKPAFTDTLNKVADILKRYPRSTIRITGHTDNRGSTQYNQQLSEQRAQAV-KWYL 179
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
R I G P TNDT+ GRQ N+R+E+ I P +I+
Sbjct: 180 SDRGVDPRRIIAEGRGELQPRATNDTEAGRQLNRRVEMLIVPDQDIQ 226
>gi|254447788|ref|ZP_05061253.1| OmpA family protein [gamma proteobacterium HTCC5015]
gi|198262568|gb|EDY86848.1| OmpA family protein [gamma proteobacterium HTCC5015]
Length = 225
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 91/164 (55%), Gaps = 2/164 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S ++++ L + ++ G +D+ E + + +L+D+G+ V R GD I +P +++
Sbjct: 58 SDKRQERILEAAGGGALIGGGVGYYMDRQEAKLREKLRDSGVSVERDGDNINLIMPGNIT 117
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F + F +L +A +L +F T++A+ HTDS G+ N ++S++RA + SY
Sbjct: 118 FQTDSSDVSSSFYNVLDSVAIVLEEFDKTIVAVSGHTDSTGSDSYNQVLSEKRASSVASY 177
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
L +GV + R V GF PI N T+ GR+ N+R+EI + P
Sbjct: 178 LKSKGVLNER-FEVIGFGEARPIADNSTESGREQNRRVEITLLP 220
>gi|254465245|ref|ZP_05078656.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
gi|206686153|gb|EDZ46635.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
Length = 219
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ + G+ LD E E + L + I + GD + P ++
Sbjct: 54 DSDRGLGAATGALVGAAAGSVIGNQLDAQERELRQTLANDSITIVNTGDRLILSFPNDLT 113
Query: 82 F-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F + L+ +A L ++P++ I + HTDS G N +S+ RA+ + S+
Sbjct: 114 FATDSAAVAPAVQADLRRVADSLVRYPNSAIQVIGHTDSDGDAGYNQGLSERRANAVASH 173
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ GV +R + G P+ +N T G+ N+R+E+ + P+
Sbjct: 174 IQAGGVPYHRM-RIIGRGESQPVASNLTPEGKARNRRVEVVVIPQA 218
>gi|74314194|ref|YP_312613.1| putative outer membrane lipoprotein [Shigella sonnei Ss046]
gi|73857671|gb|AAZ90378.1| putative outer membrane protein [Shigella sonnei Ss046]
gi|323166955|gb|EFZ52694.1| inner membrane lipoprotein yiaD [Shigella sonnei 53G]
Length = 219
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC ++ + +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANTLTGVAMVLTEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 181 VDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|86147507|ref|ZP_01065818.1| outer membrane protein [Vibrio sp. MED222]
gi|218709202|ref|YP_002416823.1| putative outer membrane protein [Vibrio splendidus LGP32]
gi|85834675|gb|EAQ52822.1| outer membrane protein [Vibrio sp. MED222]
gi|218322221|emb|CAV18335.1| putative outer membrane protein [Vibrio splendidus LGP32]
Length = 222
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN--------------------- 40
+K++ L++ + ++GC R+ ++N
Sbjct: 1 MKKITLALALTVALTGCQATQRQNATTGESETNSATQGALIGAIAGAVAGAATGDDSKDR 60
Query: 41 ---------------KRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHV-SFV 83
G D+ E + +L ++G+ V R+G + + + +
Sbjct: 61 RKRALIGAAGGAAVGGGIGYYFDQQEAALREELMNSGVQVERVGENQLLLRLENGIGFDS 120
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
LE L+ +A IL ++P T + I+ HTDS G+ +N ++S+ RA+ ++++LI
Sbjct: 121 GSYALESSIHKTLRGVARILVEYPDTSLVIEGHTDSTGSESSNQVLSERRAESVRAFLIS 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ V++ R I RG +YP+ N+T GR N+R+EIQI P
Sbjct: 181 QDVAAGRAI-ARGNGERYPLCDNNTSQGRACNRRVEIQILP 220
>gi|317494692|ref|ZP_07953104.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917294|gb|EFV38641.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 219
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 33/209 (15%)
Query: 8 SMFIMTTISGCGL---ASREKKKVFLHKSNDTDIVNKRFG-------------------- 44
++ +SGC + + +V G
Sbjct: 11 AVCAALLLSGCTTNPYTGESEAGKAGVGAGLGALVGAGVGVLSSSKHDRGKGALIGAAAG 70
Query: 45 --------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPM 95
+D E + + +++ TG+ V+R GD I +P +V+F S L+
Sbjct: 71 AALGGGAGYYMDVQESKLRDKMRGTGVSVTRQGDNIILNMPNNVTFDSSSSTLKPAGANT 130
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +A +L ++P T + + +TDS G+ N+ +SQ+RAD + S LI +GV ++R + +
Sbjct: 131 LTGVAMVLKEYPKTAVNVVGYTDSTGSQDLNMRLSQQRADSVASALIVQGVEASR-VRTQ 189
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G PI +N T G+ N+R+EI + P
Sbjct: 190 GMGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|15641208|ref|NP_230840.1| putative lipoprotein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121587785|ref|ZP_01677544.1| lipoprotein, putative [Vibrio cholerae 2740-80]
gi|121728252|ref|ZP_01681285.1| lipoprotein, putative [Vibrio cholerae V52]
gi|147673077|ref|YP_001216765.1| putative lipoprotein [Vibrio cholerae O395]
gi|153819084|ref|ZP_01971751.1| lipoprotein, putative [Vibrio cholerae NCTC 8457]
gi|153823238|ref|ZP_01975905.1| lipoprotein, putative [Vibrio cholerae B33]
gi|227081367|ref|YP_002809918.1| putative lipoprotein [Vibrio cholerae M66-2]
gi|229505212|ref|ZP_04394722.1| outer membrane protein [Vibrio cholerae BX 330286]
gi|229511118|ref|ZP_04400597.1| outer membrane protein [Vibrio cholerae B33]
gi|229518237|ref|ZP_04407681.1| outer membrane protein [Vibrio cholerae RC9]
gi|229608231|ref|YP_002878879.1| outer membrane protein [Vibrio cholerae MJ-1236]
gi|255745601|ref|ZP_05419549.1| outer membrane protein [Vibrio cholera CIRS 101]
gi|262158324|ref|ZP_06029440.1| outer membrane protein [Vibrio cholerae INDRE 91/1]
gi|262169483|ref|ZP_06037175.1| outer membrane protein [Vibrio cholerae RC27]
gi|298498705|ref|ZP_07008512.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9655673|gb|AAF94354.1| lipoprotein, putative [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121547949|gb|EAX58030.1| lipoprotein, putative [Vibrio cholerae 2740-80]
gi|121629503|gb|EAX61929.1| lipoprotein, putative [Vibrio cholerae V52]
gi|126510367|gb|EAZ72961.1| lipoprotein, putative [Vibrio cholerae NCTC 8457]
gi|126519252|gb|EAZ76475.1| lipoprotein, putative [Vibrio cholerae B33]
gi|146314960|gb|ABQ19499.1| putative lipoprotein [Vibrio cholerae O395]
gi|227009255|gb|ACP05467.1| putative lipoprotein [Vibrio cholerae M66-2]
gi|227013112|gb|ACP09322.1| putative lipoprotein [Vibrio cholerae O395]
gi|229344952|gb|EEO09926.1| outer membrane protein [Vibrio cholerae RC9]
gi|229351083|gb|EEO16024.1| outer membrane protein [Vibrio cholerae B33]
gi|229357435|gb|EEO22352.1| outer membrane protein [Vibrio cholerae BX 330286]
gi|229370886|gb|ACQ61309.1| outer membrane protein [Vibrio cholerae MJ-1236]
gi|255736676|gb|EET92073.1| outer membrane protein [Vibrio cholera CIRS 101]
gi|262022296|gb|EEY41005.1| outer membrane protein [Vibrio cholerae RC27]
gi|262029765|gb|EEY48413.1| outer membrane protein [Vibrio cholerae INDRE 91/1]
gi|297543038|gb|EFH79088.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 223
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 39/222 (17%)
Query: 1 MIKELGLSMFIMTTISGC-------GLASREKKKVFLHKSNDTDIVNKRFG--------- 44
M+ + L + + +SGC + + + G
Sbjct: 1 MLNKTTLLLAAVVALSGCQATQRQNATTGETETNATTKGALLGVLAGAAVGLATGDDAKE 60
Query: 45 --------------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFV 83
D+ E E + L D+G+ V R+G + + + + F
Sbjct: 61 RRKHALIGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRMENGIGFT 120
Query: 84 SEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
S + L+ L+ +A IL ++P T + I+ HTDS G+ N ++S++RA+ ++S+L+
Sbjct: 121 SNSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVRSFLL 180
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV++ R I RG ++P+ +N+T GR N+R+EIQI P
Sbjct: 181 SQGVAAGRAI-ARGNGERFPLCSNNTAEGRACNRRVEIQILP 221
>gi|237736307|ref|ZP_04566788.1| outer membrane protein [Fusobacterium mortiferum ATCC 9817]
gi|229421655|gb|EEO36702.1| outer membrane protein [Fusobacterium mortiferum ATCC 9817]
Length = 203
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + + +G+ D E E + +L++T + VSR GD + Y+P V+F
Sbjct: 40 GKDTKGTLIGAGIGALAGLGWGAYRDNQEKELRERLKNTEVEVSREGDNLNLYLPGGVTF 99
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ + F L IA++L ++P T I + +TD+ G NL +SQ RA+ ++ Y
Sbjct: 100 ATNSANIASNFYGPLNSIASVLVQYPETRIVVNGYTDNTGAASYNLDLSQRRANSVRDYF 159
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I + + ++ G P TN T GR N+R+EIQI P
Sbjct: 160 ISQ-GVESYRVTSVGHGINNPRATNSTAAGRAENRRVEIQILP 201
>gi|149913202|ref|ZP_01901736.1| OmpA family domain protein [Roseobacter sp. AzwK-3b]
gi|149813608|gb|EDM73434.1| OmpA family domain protein [Roseobacter sp. AzwK-3b]
Length = 222
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 3/181 (1%)
Query: 8 SMFIMTTISG-CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
++ +G + S ++ K L +G+ LD+ E + + QL D + ++
Sbjct: 42 ALLGGLIGAGVGAVVSDDRAKGALIGGAIGAAGGATYGNMLDRQEAQLRQQLDDDRVQIT 101
Query: 67 RIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + +P + F + L +A+ L +P + + + HTD+ G
Sbjct: 102 NTGDRLIVTLPQDILFDVDSASVRSGLRDDLMTVASSLRDYPDSTVQVVGHTDNTGDAGY 161
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S+ RA+ + L+ GV+ +R I G P+ N T GR N+R+EI I P
Sbjct: 162 NQQLSERRANAVADVLMDGGVAFSR-IQTFGRGENQPVADNLTDAGRAQNRRVEIVILPN 220
Query: 186 G 186
Sbjct: 221 A 221
>gi|296100590|ref|YP_003610736.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295055049|gb|ADF59787.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 220
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGS--------- 45
M K + + + +SGC ++ + +V G+
Sbjct: 1 MKKRVLVIAALVSGALAVSGCTTNPYTGEREAGKSGIGAGIGSLVGAGVGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMKGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++ T + + +TDS G+ + N+ +SQ+RAD + S LI +
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYNKTAVNVIGYTDSTGSQELNMRLSQQRADSVASSLITQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I G PI +N T G+ N+R+EI + P
Sbjct: 180 GVEANRIRTSGMGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|146309839|ref|YP_001174913.1| putative outer membrane lipoprotein [Enterobacter sp. 638]
gi|145316715|gb|ABP58862.1| OmpA/MotB domain protein [Enterobacter sp. 638]
Length = 220
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
G+ + + + +++ K L + + G +D E + + ++Q TG+ V
Sbjct: 40 GIGSLVGAGVGALSSSKKDRGKGALIGAAAGAALGGGAGYYMDVQEAKLRDKMQGTGVSV 99
Query: 66 SRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L +A +L ++ T + + +TDS G+
Sbjct: 100 TRNGDNIILNMPSNVTFDSSSATLKPAGANTLTGVAMVLKEYSKTAVNVIGYTDSTGSQD 159
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RAD + S LI + + I G PI +N+T G+ N+R+EI + P
Sbjct: 160 LNMRLSQQRADSVASSLITQ-GVAANRIRTSGMGPANPIASNNTAEGKAQNRRVEITLSP 218
>gi|157149164|ref|YP_001456483.1| putative outer membrane lipoprotein [Citrobacter koseri ATCC
BAA-895]
gi|157086369|gb|ABV16047.1| hypothetical protein CKO_05004 [Citrobacter koseri ATCC BAA-895]
Length = 220
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
G+ + + + +++ K L + + G +D E + + ++Q TG+ V
Sbjct: 40 GIGSLVGAGVGALSSSKKDRGKGALIGAAAGAALGGGAGYYMDVQEAKLRDKMQGTGVSV 99
Query: 66 SRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L +A +L ++ T + + +TDS G
Sbjct: 100 TRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYNKTAVNVVGYTDSTGGQD 159
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RAD + S LI + + I G PI +N T G+ N+R+EI + P
Sbjct: 160 LNMRLSQQRADSVASALITQ-GVAANRIRTSGMGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|152972417|ref|YP_001337563.1| putative outer membrane lipoprotein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|206578997|ref|YP_002236080.1| OmpA family protein [Klebsiella pneumoniae 342]
gi|238897010|ref|YP_002921755.1| putative outer membrane lipoprotein [Klebsiella pneumoniae
NTUH-K2044]
gi|262040618|ref|ZP_06013856.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|288933077|ref|YP_003437136.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
gi|290511871|ref|ZP_06551239.1| outer membrane lipoprotein [Klebsiella sp. 1_1_55]
gi|329999890|ref|ZP_08303557.1| OmpA family protein [Klebsiella sp. MS 92-3]
gi|150957266|gb|ABR79296.1| putative outer membrane protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|206568055|gb|ACI09831.1| OmpA family protein [Klebsiella pneumoniae 342]
gi|238549337|dbj|BAH65688.1| putative outer membrane protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259041982|gb|EEW43015.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|288887806|gb|ADC56124.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
gi|289775661|gb|EFD83661.1| outer membrane lipoprotein [Klebsiella sp. 1_1_55]
gi|328538172|gb|EGF64327.1| OmpA family protein [Klebsiella sp. MS 92-3]
Length = 220
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFIM---TTISGCGLASREKKKVFL---HKSNDTDIVNKRFGS--------- 45
M K + + ++ ISGC ++ + +V G+
Sbjct: 1 MKKRVLMIAALVSGTLAISGCTTNPYTGEREAGKSGIGAGIGSLVGAGVGALSSSKHDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-E 85
+D E + + ++Q TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGIGYYMDVQEAKLRDKMQGTGVSVTRNGDNIVLNMPNNVTFDSNS 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++ T + + +TDS G+ N+ +SQ+RAD + S LI +
Sbjct: 121 ANLKPAGANTLTGVAMVLKEYEKTAVNVVGYTDSTGSKDLNMRLSQQRADSVASALITQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I G PI +N T G+ N+R+EI + P
Sbjct: 180 GVAANRIRTTGMGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|300950898|ref|ZP_07164778.1| OmpA family protein [Escherichia coli MS 116-1]
gi|300449827|gb|EFK13447.1| OmpA family protein [Escherichia coli MS 116-1]
Length = 217
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 36/217 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC ++ + +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V ++R I +G PI +N T G+ N+R+EI +
Sbjct: 181 VDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITL 216
>gi|56698398|ref|YP_168771.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56680135|gb|AAV96801.1| OmpA domain protein [Ruegeria pomeroyi DSS-3]
Length = 221
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 82/211 (38%), Gaps = 34/211 (16%)
Query: 9 MFIMTTISGCG-----LASREKKKVFLHKSNDTDIVNKRFG------------------- 44
+ + + C + + + + I+ G
Sbjct: 12 LTAILALGACTDPASLSTNTDPNQKAKQGALIGGILGAGVGAIANDSNPGLGALAGAAIG 71
Query: 45 --------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
+SLDK E + +L + GI ++ GD + +P ++F +
Sbjct: 72 AAGGGLIGNSLDKQAAELRQELANDGITITNTGDRLIVSVPNDITFDTDSSTVRPGLRSD 131
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
LQ +A L ++P + + + HTDS G N +S+ RA + L GV+ +R IS
Sbjct: 132 LQKVAAHLVRYPQSSVQVIGHTDSDGEAAYNQGLSERRAGAVADILQAGGVTYDR-ISTL 190
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
G PI +N T G+ N+R+EI + PR
Sbjct: 191 GMGENSPIASNLTPEGKARNRRVEIVVIPRN 221
>gi|300719120|ref|YP_003743923.1| outer membrane protein [Erwinia billingiae Eb661]
gi|299064956|emb|CAX62076.1| Putative outer membrane protein [Erwinia billingiae Eb661]
Length = 220
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ +++ K L + + G +D E + + +++ TG+ V+R GD I +P
Sbjct: 53 SSSKKDRGKGALIGAAAGAALGGGAGYYMDVQEAKLRDKMKGTGVSVTRQGDNIVLNMPN 112
Query: 79 HVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+V+F S L+ L +A +L ++P T + + +TDS G+ + N+ +SQ+RAD +
Sbjct: 113 NVTFDSSSSTLKPAGANTLTGVAMVLKEYPKTAVNVAGYTDSTGSRQLNMTLSQQRADSV 172
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S LI + + + G P+ +N T G+ N+R+EI + P
Sbjct: 173 GSALITQ-GVAANRVRTSGMGPDNPVASNSTAEGKAQNRRVEITLSP 218
>gi|241759693|ref|ZP_04757793.1| inner membrane lipoprotein YiaD [Neisseria flavescens SK114]
gi|241319701|gb|EER56097.1| inner membrane lipoprotein YiaD [Neisseria flavescens SK114]
Length = 226
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 2/182 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + G A K + + V G +D E + + L +T I
Sbjct: 34 KTAMYGLGGAAVCGIVGALTHGGKGARNSALACGAVGAGIGGYMDYQEKKLRQSLANTNI 93
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V R G+ I +P +V+F L + L + A L ++P T + I HTD+ G
Sbjct: 94 EVERQGNQIKLVMPENVTFATGSAALSGQAQSALSVAAQTLVQYPDTTLTINGHTDNTGN 153
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA+ + + +Q S+ +S G+ + PI +N T GR N+R+EI I
Sbjct: 154 DAINEPLSRNRAESV-AIFLQSRGVSSTRLSTFGYGSRQPIASNATVEGRAQNRRVEILI 212
Query: 183 FP 184
P
Sbjct: 213 NP 214
>gi|466690|gb|AAB18529.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655]
Length = 219
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC ++ + +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEANVRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 181 VDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|295095145|emb|CBK84235.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 220
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGS--------- 45
M K + + + +SGC ++ + +V G+
Sbjct: 1 MKKRVLVIAALVSGALAVSGCTTNPYTGEREAGKSGIGAGIGSLVGAGVGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMKGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++ T + + +TDS G+ N+ +SQ+RAD + S LI +
Sbjct: 121 ATLKPAGANTLTGVAAVLKEYNKTAVNVIGYTDSTGSQDLNMRLSQQRADSVASSLIAQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I G PI +N T G+ N+R+EI + P
Sbjct: 180 GVEANRIRTSGMGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|167644153|ref|YP_001681816.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
gi|167346583|gb|ABZ69318.1| OmpA/MotB domain protein [Caulobacter sp. K31]
Length = 224
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 37/221 (16%)
Query: 1 MIKELGLSMFIMTTISG--CGLAS--------REKKKVFLHKSNDTDIVN---------- 40
MIK+ + + +M ++ C L + ++
Sbjct: 1 MIKKTAIGVAMMGALALAACTTTDPYTGMPVRNNTGTGALSGAGVGAVLGYLTNTNKGEQ 60
Query: 41 ----------------KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV- 83
G+ +D+ + +F+ L+ +G+++ R GD I +P V+F
Sbjct: 61 GRKNALIGAGIGALAGGAVGNYMDRQQADFRRGLEGSGVMIRRNGDQIVLVMPSDVTFAV 120
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ ++ +F +L +A LN +P T I I H DS G N +S+ RA + SYL
Sbjct: 121 DKSEVQPQFTRVLDDVARTLNAYPQTTIDIVGHADSSGPDDYNQTLSERRASSVASYLTN 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G + V G + PI +NDT GR N+R+EI + P
Sbjct: 181 VGRVVPDRVFVAGQGERQPIASNDTPEGRAQNRRVEIILRP 221
>gi|83952523|ref|ZP_00961254.1| OmpA domain protein [Roseovarius nubinhibens ISM]
gi|83836196|gb|EAP75494.1| OmpA domain protein [Roseovarius nubinhibens ISM]
Length = 203
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 3/185 (1%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K+ L ++ I+G + + K K + + G++LDK E + L +
Sbjct: 21 KQGALIGGVVGAITGAAASDK-KGKGAVIGGAIGALGGAAIGNALDKQAAELERDLNNDS 79
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V+ GD + +P + F + + L +A L +P T + + HTD+ G
Sbjct: 80 VTVNNTGDRLIVTMPQDILFAIDSSTVNSGLRGDLLTVARSLQSYPDTTVQVVGHTDNTG 139
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +N +S+ RA+ + L+ GV+ +R I G P+ +N T GR N+R+EI
Sbjct: 140 SAAHNQALSERRANAVADVLMNGGVAFSR-IQTYGRGEDQPLASNLTAEGRAQNRRVEIV 198
Query: 182 IFPRG 186
I P
Sbjct: 199 ILPNA 203
>gi|148979919|ref|ZP_01815777.1| outer membrane protein [Vibrionales bacterium SWAT-3]
gi|145961523|gb|EDK26825.1| outer membrane protein [Vibrionales bacterium SWAT-3]
Length = 221
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 38/220 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN--------------------- 40
+K++ L++ + ++GC R+ ++N
Sbjct: 1 MKKITLALALTVALTGCQATQRQNATTGESETNSATQGALIGAIAGAVAGAATGDSKDRG 60
Query: 41 --------------KRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHV-SFVS 84
G D+ E + +L ++G+ V R+G + + + +
Sbjct: 61 KRALIGAAGGAAVGGGIGYYFDRQEAALREELMNSGVQVERVGENQLLLRLENGIGFDSG 120
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
LE L+ +A IL ++P T + I+ HTDS G+ N ++S+ RA+ ++++LI +
Sbjct: 121 SYALESSIHNTLRGVARILVEYPDTSLVIEGHTDSTGSESTNQILSERRAESVRAFLISQ 180
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V++ R I RG +YP+ N+T GR N+R+EIQI P
Sbjct: 181 DVAAGRAI-ARGNGERYPLCDNNTSRGRACNRRVEIQILP 219
>gi|54307294|ref|YP_128314.1| putative OmpA family protein [Photobacterium profundum SS9]
gi|46911714|emb|CAG18512.1| Putative OmpA family protein [Photobacterium profundum SS9]
Length = 241
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ I + ++ K L + + G +D E + + QL+ TGI V
Sbjct: 61 LIGAISGAVIGVASSSKSDRGKGALIGAASGAALGGGIGYYMDVQETKLRQQLESTGISV 120
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P ++F + L + + L+ +A + ++ T+I + TDS G+
Sbjct: 121 TRDGDNIVLNMPNEITFGFDQSDLSSRAVAALKNVALVAKEYDKTLINVYGFTDSTGSAS 180
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +SQ RA + S L++ GV++NR I+ +G PI +N T+ GR N+R+EI + P
Sbjct: 181 YNQRLSQVRASEVSSNLMRGGVAANRVIT-KGMGEANPIASNKTEQGRAENRRVEIVLSP 239
>gi|332185595|ref|ZP_08387343.1| rickettsia 17 kDa surface antigen family protein [Sphingomonas sp.
S17]
gi|332014573|gb|EGI56630.1| rickettsia 17 kDa surface antigen family protein [Sphingomonas sp.
S17]
Length = 225
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILN 104
+DK E + + + T + V R GD + +P ++F ++ +F L +A IL+
Sbjct: 80 YMDKQERDLRARTAGTDVQVVRQGDDLLLNLPSGITFAYDSSTVQPQFRQTLDQVADILS 139
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
++ T I + HTDS G+ N +S+ RA + YL RGV R I RGF PI
Sbjct: 140 QYKQTYIDVYGHTDSTGSDSYNQALSERRAVAVADYLASRGVQPAR-IGTRGFGKSQPIA 198
Query: 165 TNDTKVGRQNNQRIEIQIFP--RGNIK 189
+NDT GR N+R+EI+I P G+++
Sbjct: 199 SNDTDAGRAANRRVEIKIVPIREGDLR 225
>gi|293393749|ref|ZP_06638056.1| OmpA family protein [Serratia odorifera DSM 4582]
gi|291423576|gb|EFE96798.1| OmpA family protein [Serratia odorifera DSM 4582]
Length = 220
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 36/219 (16%)
Query: 1 MIKELGL---SMFIMTTISGC-------------------------------GLASREKK 26
M K + + ++ + +S C + +++
Sbjct: 1 MKKRIAIIAGAVAMTMALSACTTNPYTGESEAGKSGIGAGLGAALGAGIGVLSSSKKDRG 60
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SE 85
K L + + G +D E + + +++ TG+ V+R GD I +P +V+F
Sbjct: 61 KGALIGAAAGAALGGGAGYYMDVQEAKLRDKMRGTGVSVTRQGDNIVLNMPNNVTFDTDS 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G +N+ +SQ+RAD + S LI +
Sbjct: 121 STLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGARAHNMTLSQQRADGVASALITQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I +G PI +N T G+ N+R+EI + P
Sbjct: 180 GVAANRIRTQGAGPDNPIASNSTTEGKAQNRRVEITLSP 218
>gi|86139806|ref|ZP_01058372.1| OmpA domain protein [Roseobacter sp. MED193]
gi|85823435|gb|EAQ43644.1| OmpA domain protein [Roseobacter sp. MED193]
Length = 218
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + ++G +S K + + ++ GS LDK E E + L + GI
Sbjct: 38 LIAGAIVGAGLAGLSNSSN-KGAAVVAGAAAGALLGGVIGSQLDKQEAELRESLSNNGIT 96
Query: 65 VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ GD + +P ++F + L+ +A + ++P++ + + HTDS G
Sbjct: 97 IVNTGDRLIVSLPNDLTFASDSAAISPAVESDLRQVAQSIVRYPNSSVQVIGHTDSDGDA 156
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S++RA+ + + GV NR + G P+ +N T G+ N+R+EI I
Sbjct: 157 SYNQTLSEQRANTVADQVQAGGVPYNR-LQTFGRGESQPVASNLTAEGKAQNRRVEIVIV 215
Query: 184 P 184
P
Sbjct: 216 P 216
>gi|238757311|ref|ZP_04618497.1| Inner membrane lipoprotein yiaD [Yersinia aldovae ATCC 35236]
gi|238704350|gb|EEP96881.1| Inner membrane lipoprotein yiaD [Yersinia aldovae ATCC 35236]
Length = 226
Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 1 MIKELGL---SMFIMTTISGC-------------------------------GLASREKK 26
M K + + ++ + T+S C + ++
Sbjct: 8 MKKRILVTVTAISVALTLSACTTNPYTGESQAGKSGYGAGIGAALGAGIGMLSSSKHDRG 67
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SE 85
K L + + G +D E + + ++ TG+ V+R GD I +P +V+F
Sbjct: 68 KGALIGAAAGAALGGGAGYYMDVQEAKLREKMSGTGVSVTRQGDNIVLNMPNNVTFDTDS 127
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++ T + + +TDS G +N+ +SQ+RAD + S LI +
Sbjct: 128 SNLKPAGANTLTGVAMVLKEYDKTAVNVTGYTDSTGARAHNMTLSQQRADSVGSTLIVQ- 186
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I G P+ TN T G+ N+R+EI + P
Sbjct: 187 GVAANRIRTSGAGPDNPVATNSTAAGKAQNRRVEITLSP 225
>gi|148555237|ref|YP_001262819.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
gi|148500427|gb|ABQ68681.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
Length = 222
Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 87/213 (40%), Gaps = 32/213 (15%)
Query: 3 KELGLSMFIMTTISGCGLASRE------------------------------KKKVFLHK 32
K L T ++GC + +
Sbjct: 5 KMLVAMFAASTLLAGCVTDPDTGQRRLSKAGIGAIAGTALGAGAGALVGGRHNRTEAIVG 64
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKK 91
+ + G +D+ E + + Q TG+ V R GD + +P ++F + ++ +
Sbjct: 65 AGIGALAGGAIGVYMDRQEAKLREQTAGTGVEVERQGDELLLNMPAGITFATNSYEVQPQ 124
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F L +A+ L+++ T + + HTDS G+ N +S+ RA+ + + + +
Sbjct: 125 FRTTLDKVASTLSEYGKTYVDVYGHTDSTGSDAINEPLSRNRAEAVAN-YLSGHGVAAAR 183
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I +GF + P+ +N T GRQ N+R+EI+I P
Sbjct: 184 IGTQGFGSRQPVASNATPDGRQANRRVEIKIVP 216
>gi|149377133|ref|ZP_01894882.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
gi|149358551|gb|EDM47024.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
Length = 222
Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+S ++ K L + + G +DK E + + +L+ +G+ V R GD I +P +
Sbjct: 56 SSSSDRGKGALIGAASGAAIGGGIGYYMDKQEAQLRRKLEGSGVRVVRNGDEIELVMPGN 115
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++F ++ ++ F L+ +A +L +F T+I I+ HTDS G+ N L+S+ RA ++
Sbjct: 116 ITFDVNQSSIKPSFSNTLESVALVLKEFDKTIIQIEGHTDSTGSRDYNQLLSERRAGSVR 175
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+L+ + + G+ +YPI +NDT+ GR+ N+R+E+ + P
Sbjct: 176 DFLLNQ-GIEPKRTRATGYGPRYPIASNDTESGREQNRRVELTLVP 220
>gi|84391232|ref|ZP_00991563.1| outer membrane protein [Vibrio splendidus 12B01]
gi|84376521|gb|EAP93399.1| outer membrane protein [Vibrio splendidus 12B01]
Length = 222
Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN--------------------- 40
+K++ L++ + ++GC R+ ++N
Sbjct: 1 MKKITLALALTVALTGCQATQRQNATTGESETNSATQGALIGAIAGAVAGAATGDDSKDR 60
Query: 41 ---------------KRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHV-SFV 83
G D+ E + +L ++G+ V R+G + + + +
Sbjct: 61 RKRALIGAAGGAAVGGGIGYYFDQQEAALREELMNSGVQVERVGENQLLLRLENGIGFGS 120
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
LE L+ +A IL ++P T + I HTDS G+ +N ++S+ RA+ ++++LI
Sbjct: 121 GSYALESSIHNTLRGVARILVEYPDTSLVIDGHTDSTGSESSNQILSERRAESVRAFLIS 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ V++ R I RG +YP+ N+T GR N+R+EIQI P
Sbjct: 181 QDVAAGRAI-ARGNGERYPLCDNNTSQGRACNRRVEIQILP 220
>gi|71281842|ref|YP_271675.1| ompA family protein [Colwellia psychrerythraea 34H]
gi|71147582|gb|AAZ28055.1| ompA family protein [Colwellia psychrerythraea 34H]
Length = 222
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 37/219 (16%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS---------------- 45
+K++ + + + C + K+ +
Sbjct: 1 MKKIITTASAILLLQACTTFDPYTGESKTSKTAIGATTGAGLAAVVAYISNKDEDSNTRN 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSE 85
+D E + + QL+D+G+ + R GD I +P +++F S
Sbjct: 61 KRILAAAAGGAAIGGGIGFYMDSQEAKLRKQLRDSGVSIQREGDKINLIMPGNITFATSS 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
+ F +L +A +L ++ T++ + HTDS G+ + N +S+ERA + +YL +
Sbjct: 121 SNINTNFTGVLNSVALVLEEYNKTLVVVSGHTDSSGSAQYNQKLSEERAGSVANYLRGQK 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ S R + V GF P+ N + GR+ N+R+EI + P
Sbjct: 181 ILSER-LEVVGFGEAQPVADNQSAGGRELNRRVEITLLP 218
>gi|146281506|ref|YP_001171659.1| OmpA family protein [Pseudomonas stutzeri A1501]
gi|145569711|gb|ABP78817.1| OmpA family protein [Pseudomonas stutzeri A1501]
gi|327479683|gb|AEA82993.1| OmpA family protein [Pseudomonas stutzeri DSM 4166]
Length = 217
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
G+ I + +++ K L + +G +D E + + LQ TG+ V
Sbjct: 38 GIGAVSGAVIGAATSSKKDRTKGALIGAAVGGAAGGGYGYYVDTQEAKLRQTLQGTGVQV 97
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
R GD +T +P +++F + + F P L + + +F + I HTDS G+L+
Sbjct: 98 QRNGDNLTLIMPGNITFASNSADISSSFYPTLNSLVQVFKEFNKNGVDIVGHTDSTGSLQ 157
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +S RA + SYLI GV+ R IS G PI +NDT GR N+R+EI + P
Sbjct: 158 LNQDLSNRRAQSVASYLIANGVAPAR-ISSYGAGPSQPIASNDTAAGRAQNRRVEINLRP 216
>gi|294782096|ref|ZP_06747422.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA]
gi|294480737|gb|EFG28512.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA]
Length = 183
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 5/187 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++ C + + K + + + ++ ED
Sbjct: 1 MKKKIFAVLMLALLVTACSSSKKVIKNTGVGVDSANKYAIEDTEANKKPLEDII--VFDQ 58
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G+ + R G+ + +P + F + ++ P L +A L + I I +TD
Sbjct: 59 EGVTIRREGNNLILSMPELILFDFDKYVVKDGIKPSLATLAKALGENKDIHIKIDGYTDF 118
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
IGT NL +S +RA IK +LI +G + IS+ G+ + P DTN T GR N+R+E
Sbjct: 119 IGTEAYNLDLSVKRARAIKEFLISKGAIGSN-ISIEGYGEQNPADTNQTAAGRSRNRRVE 177
Query: 180 IQIFPRG 186
I RG
Sbjct: 178 F-IISRG 183
>gi|269121368|ref|YP_003309545.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
gi|268615246|gb|ACZ09614.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
Length = 215
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 32/216 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLASRE-----------------------------KKKVFLH 31
M + +++ + + C + E K +
Sbjct: 1 MKNKFIMTLALSLIVVSCTTTNPETGKTQASKTTIGAGAGAAAGAVLGQIIGKDTKGTVI 60
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFLE 89
+ V G+ DK E + + L+ TG+ V+R + I P +V+F + +
Sbjct: 61 GTAAGAAVGAVIGNVFDKQEAKLREDLKGTGVEVTRTAEGEIKLVAPENVTFATNSSTIS 120
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+F L IA++L ++P + I + HTDS G N +S RA+ + + +++ ++
Sbjct: 121 SRFTNTLDSIASVLKEYPDSNITVSGHTDSTGNDAINNPLSVNRANSVAN-YLKQEGIAS 179
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
I+ G+ K P+ +N T GR N+R+EI+I +
Sbjct: 180 SRITAVGYGSKQPVASNSTSDGRAQNRRVEIKITAK 215
>gi|270264140|ref|ZP_06192407.1| hypothetical protein SOD_g00710 [Serratia odorifera 4Rx13]
gi|270041789|gb|EFA14886.1| hypothetical protein SOD_g00710 [Serratia odorifera 4Rx13]
Length = 219
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 36/218 (16%)
Query: 2 IKELGL---SMFIMTTISGC-------------------------------GLASREKKK 27
+K + + ++ + T+S C + +++ K
Sbjct: 1 MKRIAIIAGAVSVALTLSACTTNPYTGESEAGKSGIGAGIGAALGAGVGMISSSKKDRGK 60
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV- 86
L + + G +D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 GALIGAAAGAALGGGAGYYMDVQEAKLRDKMKGTGVSVTRQGDNIVLNMPNNVTFDSSSA 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
L+ L +A +L ++P T + + +TDS G+ N+ +SQ+RAD + S LI +
Sbjct: 121 TLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSSGSRALNMTLSQQRADGVGSALITQ-G 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I G PI +N T G+ N+R+EI + P
Sbjct: 180 VAANRIRTSGAGPDNPIASNSTAEGKAQNRRVEITLSP 217
>gi|315122505|ref|YP_004062994.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313495907|gb|ADR52506.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 190
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 103/185 (55%), Positives = 128/185 (69%), Gaps = 1/185 (0%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKK-KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK G M +MT +SGC K L+ N+ ++ FGS LDKAEDE +MQLQ
Sbjct: 1 MIKRTGALMVVMTALSGCSNKGNHKLFSKKLNNENNIILIKPNFGSHLDKAEDELRMQLQ 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
D + + R D ITC+IPVH++F S L K +P+L IAT LNKFPST IAI HTDS
Sbjct: 61 DVDVSIIRKYDQITCHIPVHIAFSSGSILHKDIVPVLNSIATTLNKFPSTKIAITGHTDS 120
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
IGTL+ NLLISQ+R+ +I YLI++GVS +RF +GFAYK PIDTNDT+ GR+NNQR+E
Sbjct: 121 IGTLEYNLLISQQRSQIITDYLIEKGVSPDRFAPPQGFAYKRPIDTNDTQEGRKNNQRVE 180
Query: 180 IQIFP 184
I IFP
Sbjct: 181 INIFP 185
>gi|83945760|ref|ZP_00958104.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633]
gi|83850850|gb|EAP88711.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633]
Length = 217
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLASR-----------------------------EKKKVFLH 31
M + L ++ + + C + + ++ L
Sbjct: 2 MFRSLIAAVMALGLAAACTTTDQYGNVTRNNTGTGILAGAAAGALLGTLAGGDDRRNALI 61
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEK 90
+ + G+ +D+ E+ F+ +L+ +G+ V R+G+ + +P V+F + +++
Sbjct: 62 GAGVGALAGGGVGNYMDRQENAFRERLRGSGVTVRRVGNDLYLVMPGDVTFATNSAQIDQ 121
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+F P+L +A +L +P+T + + H DS+G N +S+ RA + + LI RGV +R
Sbjct: 122 RFGPVLNDVADVLMTYPATYVDVIGHADSVGDASYNQTLSERRASSVAAELIARGVMRDR 181
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ V G PI +NDT GR N+R+EI+I P
Sbjct: 182 -LYVAGMGESQPIASNDTDSGRAANRRVEIKIAP 214
>gi|298369467|ref|ZP_06980784.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298282024|gb|EFI23512.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 224
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + G A K + + + G +D + + L +T +
Sbjct: 34 KTAVYGLGGAAVCGIVGALTHGGKGARNSALACGAIGAGVGGYMDYQAKKLRESLANTDV 93
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V + G+ I +P +V+F + L L + L ++P T + I HTD+ G+
Sbjct: 94 KVEQQGNQIKLVMPENVTFATNSATLSANARDALTAASKTLVQYPDTTLTINGHTDNTGS 153
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA + S+L +GV+ +R ++ G + P+ +N T GR N+R+EI I
Sbjct: 154 DAINDPLSRNRAQSVASFLQSQGVAGSR-LTTAGHGSRQPVASNATPEGRAQNRRVEILI 212
Query: 183 FPRGNIKK 190
P N K
Sbjct: 213 NPDQNAIK 220
>gi|260890151|ref|ZP_05901414.1| OmpA family protein [Leptotrichia hofstadii F0254]
gi|260860174|gb|EEX74674.1| OmpA family protein [Leptotrichia hofstadii F0254]
Length = 215
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 30/212 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLAS---------------------------REKKKVFLHKS 33
M K L + + + T+ C A+ + K L +
Sbjct: 1 MKKVLAIILLSLLTVVSCTTATDGTRKVSKTGVGAGIGAAAGAVIGQAIGKDTKGTLIGT 60
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFV-SEVFLEKK 91
V G+ D+ E E + +L+ TG+ V R G+ I P +++F + ++ +
Sbjct: 61 AGGAAVGAAIGNIFDRQEKELRNKLKGTGVDVKRTGEGEIKLTAPENITFDINSYVIKPQ 120
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F L +AT+L +P + I + HTD+ G N +S RA + ++ S+
Sbjct: 121 FRNTLDSVATVLKTYPDSTIVVSGHTDTTGNDAINNPLSINRASSV-ESYLESQGISSSR 179
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
I+ RGF K PI +N T+ GR N+R+EI I
Sbjct: 180 ITSRGFGSKQPIASNSTEAGRAQNRRVEIAII 211
>gi|237728863|ref|ZP_04559344.1| OmpA/MotB domain-containing protein [Citrobacter sp. 30_2]
gi|226909485|gb|EEH95403.1| OmpA/MotB domain-containing protein [Citrobacter sp. 30_2]
Length = 220
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGS--------- 45
M K + + I +SGC ++ + +V G+
Sbjct: 1 MKKRVFVIAAIVSGALAVSGCTTNPYTGEREAGKSGIGAGIGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + ++Q TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAAVGGGIGYYMDVQEAKLREKMQGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++ T + + TDS G+ N+ +SQ+RAD + S LI +
Sbjct: 121 ANLKPAGANTLTGVAMVLKEYNKTAVNVLGFTDSTGSQDLNMRLSQQRADSVASALITQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I +G PI +N T G+ N+R+EI + P
Sbjct: 180 GVAANRIRTQGMGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|261341826|ref|ZP_05969684.1| hypothetical protein ENTCAN_08313 [Enterobacter cancerogenus ATCC
35316]
gi|288316202|gb|EFC55140.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
Length = 220
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGS--------- 45
M K + + + +SGC ++ + +V G+
Sbjct: 1 MKKRVLVIAALVSGALAVSGCTTNPYSGEREAGKSGIGAGIGSLVGAGVGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + ++Q TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMQGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++ T + + +TDS G+ N+ +SQ+RAD + S LI +
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYSKTAVNVIGYTDSTGSQDLNMRLSQQRADSVASALITQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I G PI +N T G+ N+R+EI + P
Sbjct: 180 GVAANRIRTSGMGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|269963902|ref|ZP_06178214.1| putative lipoprotein [Vibrio harveyi 1DA3]
gi|269831389|gb|EEZ85536.1| putative lipoprotein [Vibrio harveyi 1DA3]
Length = 219
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 39/216 (18%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG---------------------- 44
+++ ++ ++GC R+ +++N T
Sbjct: 3 IALALVLALTGCQATQRQNATTGEYETNSTTQGALIGAIAGAAIGLATGDDAKERRKHAL 62
Query: 45 --------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVSEVF-L 88
D+ E E + L ++G+ V R+G + + + + F S + L
Sbjct: 63 IGAAAGGATGAGVGYYFDQQEAELRRALLNSGVQVERVGENQLLLRMENGIGFSSSSYQL 122
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ L+ +A IL ++P T + I +TDS G+ N +S+ RA+ ++ YL+ + V+
Sbjct: 123 DASIHNTLRGVARILVEYPDTSLVIDGYTDSTGSDSYNQTLSERRAESVRQYLVSQNVAP 182
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R I RG+ + PI +N T GR N+R+EIQI P
Sbjct: 183 GRAI-ARGYGERNPICSNQTSEGRACNRRVEIQILP 217
>gi|300955043|ref|ZP_07167452.1| OmpA family protein [Escherichia coli MS 175-1]
gi|300318040|gb|EFJ67824.1| OmpA family protein [Escherichia coli MS 175-1]
Length = 215
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 36/216 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC ++ + +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
V ++R I +G PI +N T G+ N+R+EI
Sbjct: 181 VDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEIT 215
>gi|283835926|ref|ZP_06355667.1| OmpA family protein [Citrobacter youngae ATCC 29220]
gi|291068103|gb|EFE06212.1| OmpA family protein [Citrobacter youngae ATCC 29220]
Length = 220
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGS--------- 45
M K + + I +SGC ++ + +V G+
Sbjct: 1 MKKRVFVIAAIVSGALAVSGCTTNPYTGEREAGKSGIGAGIGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-E 85
+D E + + ++Q TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAAVGGGIGYYMDVQEAKLREKMQGTGVSVTRSGDNIILNMPNNVTFDSNS 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++ T + + TDS G+ N+ +SQ+RAD + S LI +
Sbjct: 121 SNLKPAGANTLTGVAMVLKEYDKTAVNVLGFTDSTGSQDLNMRLSQQRADSVASALITQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I +G PI +N T G+ N+R+EI + P
Sbjct: 180 GVAANRIRTQGMGPANPIASNSTAEGKAQNRRVEITLSP 218
>gi|296313347|ref|ZP_06863288.1| OmpA family protein [Neisseria polysaccharea ATCC 43768]
gi|296840164|gb|EFH24102.1| OmpA family protein [Neisseria polysaccharea ATCC 43768]
Length = 225
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 2/182 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + G A K + + + G +D E + L T +
Sbjct: 34 KSAMYGLGGAAVCGIVGALTHSGKGARNSALACGAIGAGIGGYMDYQEQRLRQSLTGTQV 93
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V R G+ I +P +V+F L L A L ++P T + I HTD+ G+
Sbjct: 94 QVQRQGNQIKLVMPENVTFATGSAVLSNNAQFALNTAAQTLVQYPDTTLTINGHTDNTGS 153
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL RGV+++R ++V G+ P+ +N T GR N+R+EI I
Sbjct: 154 DAVNNPLSQHRAQAVAYYLQSRGVAASR-LAVYGYGSHMPVASNATAEGRAQNRRVEILI 212
Query: 183 FP 184
P
Sbjct: 213 NP 214
>gi|254848320|ref|ZP_05237670.1| lipoprotein [Vibrio cholerae MO10]
gi|254844025|gb|EET22439.1| lipoprotein [Vibrio cholerae MO10]
Length = 222
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGC-------GLASREKKKVFLHKSNDTDIVNKRFG---------- 44
+ + L + + +SGC + + + G
Sbjct: 1 MNKTTLLLAAVVALSGCQATQRQNATTGETETNATTKGALLGVLAGAAVGLATGDDAKER 60
Query: 45 -------------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVS 84
D+ E E + L D+G+ V R+G + + + + F S
Sbjct: 61 RKHALIGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRMENGIGFTS 120
Query: 85 EVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L+ L+ +A IL ++P T + I+ HTDS G+ N ++S++RA+ ++S+L+
Sbjct: 121 NSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVRSFLLS 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV++ R I RG ++P+ +N+T GR N+R+EIQI P
Sbjct: 181 QGVAAGRAI-ARGNGERFPLCSNNTAEGRACNRRVEIQILP 220
>gi|326386301|ref|ZP_08207925.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
gi|326209526|gb|EGD60319.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
Length = 229
Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats.
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 4/145 (2%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDM--ITCYIPVHVSFVSEVF-LEKKFLPMLQLI 99
G ++DK E + + +G+ V + D I +P V+F ++ ++ F L +
Sbjct: 74 VGYTMDKQIKELKEKTAGSGVDVKSVDDGQAILVNLPSGVTFDTDSTVIKPGFRDTLDKV 133
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A LN++P+++I + HTDS G+ N +S+ RA V+ YL +GVSS R S GF
Sbjct: 134 ADSLNRYPNSLIDVYGHTDSTGSDAYNQTLSENRARVVADYLSSKGVSSARIRST-GFGK 192
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ +NDT GR N+R+EI+I P
Sbjct: 193 TQPVASNDTPEGRAANRRVEIKIVP 217
>gi|260773001|ref|ZP_05881917.1| outer membrane protein [Vibrio metschnikovii CIP 69.14]
gi|260612140|gb|EEX37343.1| outer membrane protein [Vibrio metschnikovii CIP 69.14]
Length = 222
Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD------------------------ 37
+K++ L+M ++ T+SGC R+ ++N
Sbjct: 1 MKKITLAMALVITLSGCAATQRQNATTGESETNAATRGALIGAVAGAAAGLATGDNAKQR 60
Query: 38 ------------IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVS 84
V G D+ E + +L +G+ V R+GD + + + F +
Sbjct: 61 RQRALIGATGGAAVGGGVGYYFDQQEAALREELLHSGVQVQRVGDNQLLLRMENGIGFQT 120
Query: 85 EVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L+ L+ +A IL ++P T + I HTDS G N ++S+ RA+ ++S+L+
Sbjct: 121 NSYQLDSSIHRTLRGVAKILVQYPDTSLVIDGHTDSTGGDTTNQVLSERRAESVRSFLLS 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV+ R I RG ++PI TN T GR N+R++IQI P
Sbjct: 181 QGVAPGRAI-ARGNGSRFPICTNSTVEGRACNRRVDIQILP 220
>gi|257451630|ref|ZP_05616929.1| Outer membrane porin F [Fusobacterium sp. 3_1_5R]
gi|257466946|ref|ZP_05631257.1| Outer membrane porin F [Fusobacterium gonidiaformans ATCC 25563]
Length = 183
Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 10/186 (5%)
Query: 1 MIKELGLSMFIM-TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL- 58
M K LG+++ + CG S + + N + +D A+ + +
Sbjct: 1 MKKYLGITLLLASFVFVACGKTSNTSIRDLSTEGNQNFAI-----EDIDAAKKPLEDIIV 55
Query: 59 -QDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G+ + R G+ + +P + F ++ ++ P L+ +A L I I +
Sbjct: 56 FNQDGVTIRREGNNLILSMPELILFDFNKYEVKNGIKPSLRTLANALGANADIKIKIDGY 115
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD IG+ NL +S RA IKSYL+ +G N IS+ G+ + P+ +NDT+ GR N+
Sbjct: 116 TDFIGSEGYNLELSVNRAKAIKSYLVAQGAIENN-ISIEGYGKQNPVASNDTESGRARNR 174
Query: 177 RIEIQI 182
R+E I
Sbjct: 175 RVEFII 180
>gi|218514237|ref|ZP_03511077.1| outer membrane lipoprotein [Rhizobium etli 8C-3]
Length = 141
Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
D+ E E + QL+ TGI V+R GD I +P +++F + ++ F P L +A +L KF
Sbjct: 1 DQQEAELRAQLEGTGISVTRNGDNIILNMPSNITFDVDQDAVKPGFYPTLNSVAIVLRKF 60
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
T+I + HTDS G+L++N +SQ RA + + R +S GF P+ +N
Sbjct: 61 NRTLIDVNGHTDSTGSLQHNQDLSQRRALSVAD-YLGGQGIDQRRVSAVGFGPSQPVASN 119
Query: 167 DTKVGRQNNQRIEIQIFP 184
++ GR N+R+EIQI P
Sbjct: 120 ASEAGRAQNRRVEIQIAP 137
>gi|260432355|ref|ZP_05786326.1| inner membrane lipoprotein YiaD [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416183|gb|EEX09442.1| inner membrane lipoprotein YiaD [Silicibacter lacuscaerulensis
ITI-1157]
Length = 223
Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats.
Identities = 48/216 (22%), Positives = 77/216 (35%), Gaps = 34/216 (15%)
Query: 5 LGLSMFIMTTISGCGL-----ASREKKKVFLHKSNDTDIVNKRFG--------------- 44
L L + + C + + + ++ G
Sbjct: 8 LPLGLSAALVLGACTDPGTLRVQDDPNQNAKQGAILGGLIGAGVGAIANDSDPGLGALAG 67
Query: 45 ------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKK 91
+ LD+ E + QL + GI + GD + +P ++F +
Sbjct: 68 AAIGAAGGGLIGNQLDRQAAELRQQLANDGITIVNAGDRLIVTVPNDITFDTDSATVRPA 127
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L + L +P + + I HTDS G N +S+ RA + L GVS R
Sbjct: 128 LRADLVRVGQNLVNYPKSNVQIIGHTDSDGDAGYNQALSERRASAVADILHANGVSYAR- 186
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
I+ G PI +N T G+ N+R+EI I P GN
Sbjct: 187 ITTIGRGENQPIASNLTPEGKAQNRRVEIVIVPSGN 222
>gi|315918088|ref|ZP_07914328.1| outer membrane porin F [Fusobacterium gonidiaformans ATCC 25563]
gi|317058194|ref|ZP_07922679.1| outer membrane porin F [Fusobacterium sp. 3_1_5R]
gi|313683870|gb|EFS20705.1| outer membrane porin F [Fusobacterium sp. 3_1_5R]
gi|313691963|gb|EFS28798.1| outer membrane porin F [Fusobacterium gonidiaformans ATCC 25563]
Length = 189
Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 10/186 (5%)
Query: 1 MIKELGLSMFIM-TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL- 58
M K LG+++ + CG S + + N + +D A+ + +
Sbjct: 7 MKKYLGITLLLASFVFVACGKTSNTSIRDLSTEGNQNFAI-----EDIDAAKKPLEDIIV 61
Query: 59 -QDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G+ + R G+ + +P + F ++ ++ P L+ +A L I I +
Sbjct: 62 FNQDGVTIRREGNNLILSMPELILFDFNKYEVKNGIKPSLRTLANALGANADIKIKIDGY 121
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD IG+ NL +S RA IKSYL+ +G N IS+ G+ + P+ +NDT+ GR N+
Sbjct: 122 TDFIGSEGYNLELSVNRAKAIKSYLVAQGAIENN-ISIEGYGKQNPVASNDTESGRARNR 180
Query: 177 RIEIQI 182
R+E I
Sbjct: 181 RVEFII 186
>gi|88798562|ref|ZP_01114146.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Reinekea sp. MED297]
gi|88778662|gb|EAR09853.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Reinekea sp. MED297]
Length = 224
Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 95/180 (52%), Gaps = 4/180 (2%)
Query: 6 GLSMFIMTTISGCGLASREK-KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
++ ++ + G A +E+ K + + + G +D+ E E + +L TG+
Sbjct: 40 AIAGGLIGAVIGAATAPKEERAKRAIIGAGIGGVAGGGVGYYMDQQEKELRDELVGTGVQ 99
Query: 65 VSRIGD-MITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V R + I +P +++F + + F+P L+ +A +L ++ +T++ I HTDS G+
Sbjct: 100 VKRTEEGQIDLIMPGNITFDVNSSTVADGFIPTLRSVAKVLKEYENTLVTISGHTDSSGS 159
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N L+S++RA + + ++Q G+ R ++ G+ PI +NDT GR N+R+EI +
Sbjct: 160 EDYNQLLSEQRATSVANIILQEGIVVER-VAAAGYGELQPIASNDTPEGRAENRRVEITL 218
>gi|90413724|ref|ZP_01221712.1| Putative OmpA family protein [Photobacterium profundum 3TCK]
gi|90325193|gb|EAS41690.1| Putative OmpA family protein [Photobacterium profundum 3TCK]
Length = 241
Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ I + ++ K L + + G +D E + + QL+ TGI V
Sbjct: 61 LIGAISGAAIGVASSSKSDRGKGALIGAASGAALGGGIGYYMDVQETKLRQQLESTGISV 120
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P ++F + + L + + L+ +A + ++ T+I + TDS G+
Sbjct: 121 TRDGDNIVLNMPNEITFGIDQSDLSSRAVAALKNVALVAKEYDKTLINVYGFTDSTGSAS 180
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +SQ RA + S L++ GV++NR I+ +G PI +N T+ GR N+R+EI + P
Sbjct: 181 YNQRLSQVRASEVSSNLMRGGVAANRVIT-KGMGEAKPIASNKTEQGRAENRRVEIVLSP 239
>gi|330447262|ref|ZP_08310912.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328491453|dbj|GAA05409.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 223
Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ I + ++ K L + + G +D E + + QL +GI V
Sbjct: 43 IIGALAGAAIGVASSSKHDRGKGALIGAAAGAALGGGIGYYMDVQEAKLRQQLASSGISV 102
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R G+ I +P ++F + L + + L +A + ++P T + + TDS G
Sbjct: 103 TRDGNNIILNMPNEITFGFDQANLNDRAMNALHNVALVAKEYPKTQLNVLGFTDSKGAAS 162
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
NL +SQ RAD + +YLI++GV++NR IS +G PI +N T+ GR N+R+EI + P
Sbjct: 163 YNLRLSQVRADAVGNYLIRQGVNANRVIS-QGRGEANPIASNSTENGRAQNRRVEIILSP 221
>gi|157373855|ref|YP_001472455.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157316229|gb|ABV35327.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
Length = 226
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ K L + + G +D E E + QLQ TG+ V+R GD I +P
Sbjct: 57 SSSRSDRGKGALIGAASGAALGGGIGYYMDTQEAELRKQLQSTGVSVTRSGDNIVLNMPN 116
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V+F V + L +L +A + ++ T + + +TDS G NL +S+ RA +
Sbjct: 117 EVTFGVDQTDLSSGAKRVLNSVALVAKEYDQTQLNVLGYTDSSGAESYNLRLSKIRAIEV 176
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+YL+ + + R S G PI TN T GR N+R+EI + P
Sbjct: 177 GNYLVAQKIEYGRVKS-EGLGESRPIATNATAEGRAQNRRVEIVLSP 222
>gi|289209442|ref|YP_003461508.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288945073|gb|ADC72772.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 221
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 53/166 (31%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ R + + + + + G+ +D+ E E + QL+ TG+ V+R GD I +P H
Sbjct: 53 TSRRNRTQRAMIGAGIGALAGGAIGNYMDRQEAELREQLRGTGVSVTRDGDNIILNMPGH 112
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++F ++ +F +L +A +L ++ T I + HTD G ++ N+ +S+ RA +
Sbjct: 113 ITFDIDRTDIKPEFEEVLNSVALVLAEYDQTGIEVAGHTDITGRVEYNMDLSERRAQSVG 172
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
LI+RGV S R +V GF PI TN+T GR N+R+E+ +FP
Sbjct: 173 RALIRRGVQSVRVDTV-GFGPHQPIATNETAEGRALNRRVELTLFP 217
>gi|127511841|ref|YP_001093038.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
gi|126637136|gb|ABO22779.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 224
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ K L + V G +D E E + QLQ TG+ V+R GD I +P
Sbjct: 55 SSSKSDRGKGALIGAASGAAVGGGIGYYMDVQEAELRKQLQSTGVSVTRNGDNIILNMPN 114
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V+F V + L + +L +A + ++ T++ + TDS G+ NL +SQ RA +
Sbjct: 115 EVTFGVDQSVLSSRAKNVLDSVALVAKEYDETMLNVMGFTDSSGSESYNLRLSQVRAAEV 174
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+YL+ R ++ IS G PI N T+ GR N+R+EI + P
Sbjct: 175 ANYLMSRE-IKSQRISSVGMGESRPIADNSTQQGRAQNRRVEIVLSP 220
>gi|91226490|ref|ZP_01261239.1| putative lipoprotein [Vibrio alginolyticus 12G01]
gi|91189122|gb|EAS75403.1| putative lipoprotein [Vibrio alginolyticus 12G01]
Length = 219
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 39/216 (18%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG---------------------- 44
+++ ++ ++GC R+ +++N T
Sbjct: 3 IALALVLALTGCQATQRQNATTGEYETNSTTQGALIGAIAGAAIGLATGDDAKERRQHAL 62
Query: 45 --------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVSEVF-L 88
D+ E E + L ++G+ V R+G + + + + F S + L
Sbjct: 63 IGAAAGGATGAGVGYYFDQQEAELRRALLNSGVQVQRVGENQLLLRMENGIGFSSSSYQL 122
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ L+ +A IL ++P T + I +TDS G+ N +S+ RA+ ++ +L+ + V+
Sbjct: 123 DASIHNTLRGVARILVEYPDTSLVIDGYTDSTGSESYNQTLSERRAESVRQFLVSQNVAP 182
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R I RG+ + PI +N T GR N+R+EIQI P
Sbjct: 183 GRAI-ARGYGERNPICSNQTSEGRACNRRVEIQILP 217
>gi|254473994|ref|ZP_05087387.1| OmpA family protein [Pseudovibrio sp. JE062]
gi|211956883|gb|EEA92090.1| OmpA family protein [Pseudovibrio sp. JE062]
Length = 220
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 2 IKELG---LSMFIMTTISGCGLA--------------------------------SREKK 26
+K+L +++ + +++ C +
Sbjct: 1 MKKLMHAAIAIVLGLSVAACTTTNPYTGESRISKTAGGAGLGAATGAIIGAIAGGKSARV 60
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SE 85
+ L + ++ G+ +D+ E + + QLQ +G+ V+R G+ I +P V+F +
Sbjct: 61 EGALVGAAAGGLIGGGIGNYMDRQEAQLRQQLQSSGVSVTRNGNQIVLNMPNDVTFAVGQ 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L + + +L +A + +FP T + + HTD+ G+ + NL +SQ RAD + + +
Sbjct: 121 ATLSSRAMQVLNSVALVAKEFPQTRLNVYGHTDNTGSAQFNLQLSQRRADSVSN-YLFNQ 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ IS G+ PI +N T+ GR N+R+EI + P
Sbjct: 180 GVNGARISAAGYGLTSPIASNATEAGRAQNRRVEIILSP 218
>gi|261210647|ref|ZP_05924939.1| outer membrane protein [Vibrio sp. RC341]
gi|260840132|gb|EEX66712.1| outer membrane protein [Vibrio sp. RC341]
Length = 223
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD----------------------- 37
M+ + L + + +SGC R+ ++N
Sbjct: 1 MLNKTTLLLAAVMALSGCQATQRQNATTGETETNSATKGALLGALAGAAVGLATGDDAKE 60
Query: 38 -------------IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFV 83
V G D+ E E + L D+G+ V R+G + + + + F
Sbjct: 61 RRKHALIGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLLLRMENGIGFT 120
Query: 84 SEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
S + L+ L+ +A IL ++P T + I+ HTDS G+ N ++S++RA+ ++++L+
Sbjct: 121 SSSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVRAFLL 180
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV++ R I RG ++P+ +N T GR N+R+EIQI P
Sbjct: 181 AQGVAAGRAI-ARGNGERFPLCSNSTAEGRACNRRVEIQILP 221
>gi|323189288|gb|EFZ74571.1| inner membrane lipoprotein yiaD [Escherichia coli RN587/1]
Length = 219
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC ++ + +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKLAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V ++R I +G PI +N T G+ N+R+EI + P
Sbjct: 181 VDASR-IRTQGLGPANPIASNSTSEGKAQNRRVEITLSP 218
>gi|308188742|ref|YP_003932873.1| OOP family outer membrane lipoprotein yiaD precursor [Pantoea
vagans C9-1]
gi|308059252|gb|ADO11424.1| Putative OOP family outer membrane lipoprotein yiaD precursor
[Pantoea vagans C9-1]
Length = 220
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
GL + + + ++++K L + + G +D E + + +++ TG+ V
Sbjct: 40 GLGALVGAGVGVLSSSKKDRRKGALIGAAGGAALGGGVGYYMDVQEAKLRDKMRGTGVSV 99
Query: 66 SRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L ++ +L ++P T + + +TDS G+
Sbjct: 100 TRNGDNIVLNMPNNVTFDSSSSNLKPAGANTLTGVSMVLKEYPKTAVNVVGYTDSTGSRA 159
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RA+ + S LI + ++ + +G P+ TN T+ G+ N+R+EI + P
Sbjct: 160 LNMRLSQQRAESVASALIVQ-GVASDRLRTQGAGPDNPVATNSTEAGKAQNRRVEITLSP 218
>gi|150398661|ref|YP_001329128.1| OmpA/MotB domain-containing protein [Sinorhizobium medicae WSM419]
gi|150030176|gb|ABR62293.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419]
Length = 221
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSN-----------------DTDIVNKRF 43
MIK+ + +SGC + + + +R
Sbjct: 1 MIKKCAILAVAAIYLSGCTTTDPYTGEQKMSNTAGGALIGAGLGAATGLLVGGSAAGRRD 60
Query: 44 G----------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-V 86
+ +D+ E E + QLQ TG+ V+R GD I +P +++F ++
Sbjct: 61 AALVGAGIGALGGGLVGNYMDQQESELRAQLQGTGVSVTRAGDRIILNMPSNITFATDRD 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ F L +A +L KF T+I + HTDS G+ N +S+ RA + +YL R
Sbjct: 121 QVIPAFYSTLDSVAIVLRKFSKTLIDVDGHTDSTGSASYNQGLSERRAASVANYLASR-G 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R +S G+ + P+ +N +++GR N+R+EI I P
Sbjct: 180 VDQRRMSAVGYGMERPVASNASEIGRVQNRRVEISIAP 217
>gi|304398041|ref|ZP_07379916.1| OmpA/MotB domain protein [Pantoea sp. aB]
gi|304354327|gb|EFM18699.1| OmpA/MotB domain protein [Pantoea sp. aB]
Length = 219
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
GL + + + ++++K L + + G +D E + + +++ TG+ V
Sbjct: 40 GLGALVGAGVGVLSSSKKDRRKGALIGAAGGAALGGGVGYYMDVQEAKLRDKMRGTGVSV 99
Query: 66 SRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F S L+ L ++ +L ++P T + + +TDS G+
Sbjct: 100 TRNGDNIVLNMPNNVTFDSNSSNLKPAGANTLTGVSMVLKEYPKTAVNVVGYTDSTGSRA 159
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RA+ + S LI + ++ + +G P+ TN T+ G+ N+R+EI + P
Sbjct: 160 LNMRLSQQRAESVASALIVQ-GVASDRLRTQGAGPDNPVATNSTEAGKAQNRRVEITLSP 218
>gi|330504865|ref|YP_004381734.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328919151|gb|AEB59982.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 218
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 2/178 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
G+ I + +++ K L + +G +D E + + LQ TG+ V
Sbjct: 39 GIGAATGAVIGAATSSKKDRTKGALIGAAVGGAAGGGYGYYVDTQEAKLRQTLQGTGVQV 98
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
R GD + +P +++F + + F P L + + +F + I HTDS G+ +
Sbjct: 99 QRNGDDLKLIMPGNITFASNSADISSSFYPTLNSLVLVFKEFNKNGVNIVGHTDSTGSQE 158
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + + + + IS G PI +N T GR N+R+EI +
Sbjct: 159 LNQSLSQRRAQSVAN-YLTANGVPGQRISAYGAGPSQPIASNATDAGRAQNRRVEINL 215
>gi|153215326|ref|ZP_01949939.1| lipoprotein, putative [Vibrio cholerae 1587]
gi|153826671|ref|ZP_01979338.1| lipoprotein, putative [Vibrio cholerae MZO-2]
gi|153829618|ref|ZP_01982285.1| putative lipoprotein [Vibrio cholerae 623-39]
gi|183179599|ref|ZP_02957810.1| lipoprotein, putative [Vibrio cholerae MZO-3]
gi|229515575|ref|ZP_04405034.1| outer membrane protein [Vibrio cholerae TMA 21]
gi|229520377|ref|ZP_04409802.1| outer membrane protein [Vibrio cholerae TM 11079-80]
gi|229525804|ref|ZP_04415209.1| outer membrane protein [Vibrio cholerae bv. albensis VL426]
gi|229529718|ref|ZP_04419108.1| outer membrane protein [Vibrio cholerae 12129(1)]
gi|254226715|ref|ZP_04920292.1| lipoprotein, putative [Vibrio cholerae V51]
gi|262191649|ref|ZP_06049827.1| outer membrane protein [Vibrio cholerae CT 5369-93]
gi|297578794|ref|ZP_06940722.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|124114769|gb|EAY33589.1| lipoprotein, putative [Vibrio cholerae 1587]
gi|125620776|gb|EAZ49133.1| lipoprotein, putative [Vibrio cholerae V51]
gi|148874894|gb|EDL73029.1| putative lipoprotein [Vibrio cholerae 623-39]
gi|149739533|gb|EDM53761.1| lipoprotein, putative [Vibrio cholerae MZO-2]
gi|183013010|gb|EDT88310.1| lipoprotein, putative [Vibrio cholerae MZO-3]
gi|229333492|gb|EEN98978.1| outer membrane protein [Vibrio cholerae 12129(1)]
gi|229339385|gb|EEO04402.1| outer membrane protein [Vibrio cholerae bv. albensis VL426]
gi|229342475|gb|EEO07468.1| outer membrane protein [Vibrio cholerae TM 11079-80]
gi|229347344|gb|EEO12304.1| outer membrane protein [Vibrio cholerae TMA 21]
gi|262032491|gb|EEY51051.1| outer membrane protein [Vibrio cholerae CT 5369-93]
gi|297536388|gb|EFH75221.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|327483893|gb|AEA78300.1| Outer membrane protein [Vibrio cholerae LMA3894-4]
Length = 223
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD----------------------- 37
M+ + L + + +SGC R+ ++N T
Sbjct: 1 MLNKTTLLLAAVVALSGCQATQRQNATTGETETNATTKGALLGALAGAAVGLATGDDAKE 60
Query: 38 -------------IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFV 83
V G D+ E E + L D+G+ V R+G + + + + F
Sbjct: 61 RRKHALIGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRMENGIGFT 120
Query: 84 SEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
S + L+ L+ +A IL ++P T + I+ HTDS G+ N ++S++RA+ ++S+L+
Sbjct: 121 SNSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVRSFLL 180
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV++ R I RG ++P+ +N+T GR N+R+EIQI P
Sbjct: 181 SQGVAAGRAI-ARGNGERFPLCSNNTAEGRACNRRVEIQILP 221
>gi|307547058|ref|YP_003899537.1| OmpA/MotB domain protein [Halomonas elongata DSM 2581]
gi|307219082|emb|CBV44352.1| OmpA/MotB domain protein [Halomonas elongata DSM 2581]
Length = 223
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G S ++ L + G+ +D+ E + + +Q TGI V R G+ I +P
Sbjct: 54 GDGSTSRRDRALIGAAAGAAAGGGIGAYMDRQEQQLRSSMQGTGIGVERQGNDIVLNMPS 113
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V+F L L ++ +L ++ T I I HTDS G N +S+ RA +
Sbjct: 114 EVTFGFDSSDLTPAATSALNDVSNVLTQYTDTRINIAGHTDSTGDAGYNQRLSERRAQAV 173
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ + S ++++G+ P+ +NDT+ GR N+R+E+ + P
Sbjct: 174 GQ-YLSQSGVSAGRLNMQGYGENQPVASNDTEAGRAQNRRVEMTLTP 219
>gi|157368311|ref|YP_001476300.1| putative outer membrane lipoprotein [Serratia proteamaculans 568]
gi|157320075|gb|ABV39172.1| OmpA/MotB domain protein [Serratia proteamaculans 568]
Length = 220
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 1 MIKELGL---SMFIMTTISGC-------------------------------GLASREKK 26
M K + + ++ I T+S C + +++
Sbjct: 1 MNKRIAIIAGAVSIALTLSACTTNPYTGESEAGKSGIGAGIGAALGAGVGMLSSSKKDRG 60
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
K L + + G +D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGAGYYMDVQEAKLRDKMKGTGVSVTRQGDNIVLNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + I +TDS G+ N+ +SQ+RAD + S LI +
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNIIGYTDSTGSRALNMTLSQQRADGVGSALITQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ + G PI +N T G+ N+R+EI + P
Sbjct: 180 GVAANRVRTSGAGPDNPIASNSTTEGKAQNRRVEITLSP 218
>gi|123444325|ref|YP_001008290.1| putative outer membrane lipoprotein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122091286|emb|CAL14172.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 219
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGC-------------------------------GLASREKK 26
M K + ++ T+S C + ++
Sbjct: 1 MKKRILATVAAVSVALTLSACTTNPYTGESQAGKSGYGAGIGAALGAGIGMLSSSKHDRG 60
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SE 85
K L + + G +D E + + ++ TG+ V+R GD I +P +V+F
Sbjct: 61 KGALIGAAAGAALGGGAGYYMDVQEAKLREKMSGTGVSVTRQGDNIVLNMPNNVTFDTDS 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++ T + + +TDS G +N+ +SQ+RAD + S LI +
Sbjct: 121 SNLKPAGANTLTGVAMVLKEYDKTAVNVTGYTDSTGARAHNMTLSQQRADSVGSALIVQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I G P+ +N T G+ N+R+EI + P
Sbjct: 180 GVAANRIRTSGAGPDNPVASNSTAAGKAQNRRVEITLSP 218
>gi|254292013|ref|ZP_04962792.1| lipoprotein, putative [Vibrio cholerae AM-19226]
gi|150422090|gb|EDN14058.1| lipoprotein, putative [Vibrio cholerae AM-19226]
Length = 223
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD----------------------- 37
M+ + L + + +SGC R+ ++N T
Sbjct: 1 MLNKTTLLLAAVVALSGCQATQRQNATTGETETNATTKGALLGALAGAAVGLATGDDAKE 60
Query: 38 -------------IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFV 83
V G D+ E E + L D+G+ V R+G + + + + F
Sbjct: 61 RRKHALIGAAGGAAVGGGIGYYFDQQEAELRKALMDSGVQVVRVGENQLMLRMENGIGFT 120
Query: 84 SEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
S + L+ L+ +A IL ++P T + I+ HTDS G+ N ++S++RA+ ++S+L+
Sbjct: 121 SNSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDSTNQVLSEKRAESVRSFLL 180
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV+ R I RG ++P+ +N+T GR N+R+EIQI P
Sbjct: 181 SQGVAEGRAI-ARGNGERFPLCSNNTAEGRACNRRVEIQILP 221
>gi|329297799|ref|ZP_08255135.1| putative outer membrane lipoprotein [Plautia stali symbiont]
Length = 177
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ +++ K L + + G +D E + + +++ TG+ V+R GD I +P
Sbjct: 10 SSSKKDRGKGALIGAASGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRQGDNIVLNMPN 69
Query: 79 HVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+V+F S L+ L +A +L ++P + + TDS GT N+ +SQ+RA+ +
Sbjct: 70 NVTFDSSSANLKPAGANTLTGVAMVLKEYPKAAVNVVGFTDSTGTRALNMRLSQQRAESV 129
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S LI + + + +G P+ +N T+ G+ N+R+EI + P
Sbjct: 130 ASALIVQ-GVAQNRLRTQGMGPDNPVASNSTEAGKAQNRRVEIPLSP 175
>gi|328473002|gb|EGF43850.1| putative lipoprotein [Vibrio parahaemolyticus 10329]
Length = 219
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 39/216 (18%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG---------------------- 44
+++ ++ ++GC R+ +++N T
Sbjct: 3 IALALVLALTGCQATQRQNATTGEYETNSTTQGALIGAIAGAAIGLATGDNAKERRKHAL 62
Query: 45 --------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVSEVF-L 88
D+ E E + L ++G+ V R+G + + + + F S + L
Sbjct: 63 IGAAAGGATGAGVGYYFDQQEAELRRALLNSGVQVQRVGENQLLLRMENGIGFSSSSYQL 122
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ L+ +A IL ++P T + I +TDS G+ N +S+ RA+ ++ +L+ + V+
Sbjct: 123 DASIHNTLRGVARILVEYPDTSLVIDGYTDSTGSESYNQTLSERRAESVRQFLVSQKVAP 182
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R I RG+ + PI +N T GR N+R+EIQI P
Sbjct: 183 GRAI-ARGYGERNPICSNQTSEGRACNRRVEIQILP 217
>gi|121596298|ref|YP_988194.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42]
gi|222112527|ref|YP_002554791.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY]
gi|120608378|gb|ABM44118.1| OmpA/MotB domain protein [Acidovorax sp. JS42]
gi|221731971|gb|ACM34791.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY]
Length = 216
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 85/210 (40%), Gaps = 29/210 (13%)
Query: 1 MIKELGLSMFIMTTIS-GCG-------------------------LASREKKKVFLHKSN 34
M K L + + ++ GC + + + +
Sbjct: 1 MRKPLLIGSLAVVMLATGCANMTDTQRRTATGAGVGALGGAAIGAMTGGHAAQGAVIGAG 60
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSFVSE-VFLEKKF 92
+ + +++ + + Q Q TG+ V++ + + IP +SF + ++ F
Sbjct: 61 VGALGTYIWSQHMERQKQDMQAATQGTGVTVTQTPDNQLKLDIPSDISFATNRSDIQPNF 120
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
P+L A L P+T + I HTDS G+ N +S +RA+ ++ + + I
Sbjct: 121 RPILDRFAEGLRNNPNTEVRIVGHTDSTGSDAINNPLSLDRAESTRN-YLTARGVNGNRI 179
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V G + P+ +NDT GR N+R+EI +
Sbjct: 180 HVEGRGSREPVASNDTSDGRARNRRVEIYV 209
>gi|238793173|ref|ZP_04636801.1| Inner membrane lipoprotein yiaD [Yersinia intermedia ATCC 29909]
gi|238727546|gb|EEQ19072.1| Inner membrane lipoprotein yiaD [Yersinia intermedia ATCC 29909]
Length = 219
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGC-------------------------------GLASREKK 26
M K + ++ T+S C + ++
Sbjct: 1 MKKRILATVAAVSVALTLSACTTNPYTGESQAGKSGYGAGIGAALGAGIGMLSSSKHDRG 60
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SE 85
K L + + G +D E + + ++ TG+ V+R GD I +P +V+F
Sbjct: 61 KGALIGAAAGAALGGGAGYYMDVQEAKLREKMSGTGVSVTRQGDNIVLNMPNNVTFDTDS 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++ T + + +TDS G +N+ +SQ+RAD + S LI +
Sbjct: 121 SNLKPAGANTLTGVAMVLKEYDKTAVNVTGYTDSSGARAHNMTLSQQRADSVGSALIVQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I G P+ +N T G+ N+R+EI + P
Sbjct: 180 GVAANRIRTSGAGPDNPVASNSTAAGKAQNRRVEITLSP 218
>gi|256827978|ref|YP_003156706.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256577154|gb|ACU88290.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 223
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 34/222 (15%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKV------FLHKSNDTDIVNKRFGSS-------- 46
M K + + + ISGC ++ K + IV + G
Sbjct: 1 MKKLILIVLVAAIAISGCATMDQQSKTTKGATYGAAGGAAAGAIVGQIIGKDTKGTLIGA 60
Query: 47 -----------------LDKAEDEFQMQL-QDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
+D E + + L Q + V R GD++ + V+F
Sbjct: 61 AAGAAIGGLAGAGVGRMMDNQEADMRQALSQSEEVAVRREGDLLALTLKGDVTFAVDSDV 120
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
+ ++ IA +L K+P T I ++ HTDS G+ N +S+ RA ++ L++RGV+
Sbjct: 121 VLPGLYTEIERIAQVLVKYPQTTIVVEGHTDSTGSDTYNQALSERRAWSVQRLLVERGVN 180
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+R I+ G+ P+ TNDT GRQ N+R+EI++ P +
Sbjct: 181 PSR-ITAMGYGESRPVATNDTPEGRQMNRRVEIRVNPNTTQQ 221
>gi|313205587|ref|YP_004044764.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868]
gi|312444903|gb|ADQ81258.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868]
gi|315022683|gb|EFT35708.1| OmpA/MotB domain protein [Riemerella anatipestifer RA-YM]
gi|325334983|gb|ADZ11257.1| Outer membrane protein related peptidoglycan-associated
(lipo)protein [Riemerella anatipestifer RA-GD]
Length = 230
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 1/163 (0%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ + GS +DK E + L + G IT
Sbjct: 63 GAVLGGIIGGVAGNVIGSKMDKQAKEIKEALPGAEVERVNEGIKITLNENTVNFGFDSAN 122
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L L +A +L P T I + HTDS G NL +S+ RA+ + SYL G++
Sbjct: 123 LTSVAKTNLDKLAQVLKNNPDTNINVYGHTDSRGADDYNLRLSERRANAVVSYLSSLGIA 182
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
S+R I +G PI +NDT GR N+R+E I N+ K
Sbjct: 183 SSRMI-AKGVGEAEPIASNDTDEGRAKNRRVEFAITANENMIK 224
>gi|288575422|ref|ZP_06393704.1| OmpA family protein [Neisseria mucosa ATCC 25996]
gi|288568103|gb|EFC89663.1| OmpA family protein [Neisseria mucosa ATCC 25996]
Length = 190
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 2/182 (1%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
+ G A + + + + G +D E + + L++T I V R G
Sbjct: 4 LGGAAVCGIVGALTHGGRGARNSALACGAIGAGVGGYMDYQEKKLRENLKNTNIEVERQG 63
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ I +P +V+F L L + L ++P T + I HTD+ G N
Sbjct: 64 NQIKLVMPENVTFATGSAALSDHARNALATASETLVQYPDTTLTINGHTDNTGNDAINEP 123
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+S+ RA + YL RGV+ +R ++ G+ ++PI +N T GR N+R+EI I P N
Sbjct: 124 LSRNRALAVADYLQSRGVNGSR-LTTAGYGSRHPIASNATVEGRAQNRRVEILINPDQNA 182
Query: 189 KK 190
K
Sbjct: 183 IK 184
>gi|126666899|ref|ZP_01737875.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
gi|126628615|gb|EAZ99236.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
Length = 232
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 34/217 (15%)
Query: 1 MIKELGLSMFIMTTISGC--------------------------------GLASREKKKV 28
+ K + T+ GC + ++ K
Sbjct: 15 VKKTILAVTLASLTLGGCMTYDPYTGEQKTSNATKGSVIGALGGAAIGAATSSKSDRGKG 74
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
L + ++ G +D+ E + + QL+ TG+ V R GD I+ +P +++F ++
Sbjct: 75 ALIGAAGGAVIGGGIGVYMDRQEVQLRQQLEGTGVRVVRNGDEISLVMPGNITFDLNQTS 134
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
+ +F L+ +A +L +F T+I I+ HTDS G N L+S+ RA ++ +L+ +
Sbjct: 135 IRSQFAGTLESVALVLKEFDQTIIQIEGHTDSQGGDSYNQLLSERRASSVRDFLLNQ-GI 193
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+R G+ +YP+ +NDT GR+ N+R+E+ + P
Sbjct: 194 ESRRTRAVGYGERYPVASNDTSGGREQNRRVELTLVP 230
>gi|126175870|ref|YP_001052019.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|152999218|ref|YP_001364899.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
gi|160873831|ref|YP_001553147.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|217971891|ref|YP_002356642.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
gi|304411219|ref|ZP_07392834.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307306514|ref|ZP_07586257.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|125999075|gb|ABN63150.1| OmpA/MotB domain protein [Shewanella baltica OS155]
gi|151363836|gb|ABS06836.1| OmpA/MotB domain protein [Shewanella baltica OS185]
gi|160859353|gb|ABX47887.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|217497026|gb|ACK45219.1| OmpA/MotB domain protein [Shewanella baltica OS223]
gi|304350412|gb|EFM14815.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306910805|gb|EFN41233.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|315266058|gb|ADT92911.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 230
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 2/183 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ I + ++ K L + V G +D E + + QL TG+ V
Sbjct: 49 LIGAVAGAAIGVVSSSKSDRGKGALIGAASGAAVGGGIGYYMDVQETKLRQQLASTGVSV 108
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P V+F V + L +L +A + ++ T + + +TDS G+
Sbjct: 109 TRSGDNIILNMPNEVTFGVDQTELSDGAKRVLNSVAVVAKEYSKTQLNVLGYTDSSGSDS 168
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
NL +SQ RA + +YL+ +GV+S R S +G PI +N GR N+R+EI + P
Sbjct: 169 YNLRLSQVRAGEVGNYLMSKGVASARVKS-KGMGEASPIASNANANGRAQNRRVEIVLTP 227
Query: 185 RGN 187
G
Sbjct: 228 TGQ 230
>gi|149190355|ref|ZP_01868628.1| outer membrane protein [Vibrio shilonii AK1]
gi|148835844|gb|EDL52808.1| outer membrane protein [Vibrio shilonii AK1]
Length = 219
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 2 IKELGLSMFIMTTISGC-------GLASREKKKVFLHKSNDTDIVNKRFG---------- 44
+K++ +++ +++ + GC + + I G
Sbjct: 3 LKKVVVALGLISLV-GCQATQRQNATTGEYETNSATKGAVIGAIAGTAVGIASGGDSRGI 61
Query: 45 ---------------SSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEV-F 87
D+ E + +L ++G+ V R+GD + + + F S
Sbjct: 62 LIGAASGAALGGGVGYYFDQQEKALRQELLNSGVQVERVGDNQLLLRLENGIGFDSNSHA 121
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L L+ +A IL ++P+T + I+ +TDS G+ + N +S++RA+ ++S+LI + V+
Sbjct: 122 LNSSIHNTLRGVARILVEYPNTSLVIEGYTDSTGSAQYNQELSEKRAEQVRSFLISQNVA 181
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ R + RG ++PI +N T GRQ N+R+EI+I P
Sbjct: 182 AGRAV-ARGNGERFPICSNSTPEGRQCNRRVEIKILP 217
>gi|312884493|ref|ZP_07744197.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367805|gb|EFP95353.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 222
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG----------------- 44
+ ++ L++ +SGC R+ ++N T
Sbjct: 1 MNKMTLTLVATLILSGCQATQRQNATTGQDETNSTTQGAIIGAIAGAAIGLATGDNAKER 60
Query: 45 -------------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFV- 83
D+ E + +L ++G+ V R G + + + + F
Sbjct: 61 RNQALIGAAGGAAVGGGIGYYFDQQEAALRKELLNSGVQVERTGENQLRLRMENGIGFSS 120
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L+ L+ +A IL ++P T + I+ +TDS G+ + N ++S++RA+ ++ YL+
Sbjct: 121 GSSTLDNSIHKTLRGVARILVEYPETSLVIEGNTDSTGSDRTNQILSEKRAESVRGYLVG 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV+ R +S RG + PI TN TK GR N+R+EI+I P
Sbjct: 181 QGVAPGRAVS-RGLGERQPICTNSTKEGRACNRRVEIKILP 220
>gi|309787755|ref|ZP_07682366.1| inner membrane lipoyiaD domain protein [Shigella dysenteriae 1617]
gi|308924505|gb|EFP70001.1| inner membrane lipoyiaD domain protein [Shigella dysenteriae 1617]
Length = 147
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 2/146 (1%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQL 98
G +D E + + +++ TG+ V+R GD I +P +V+F S L+ L
Sbjct: 2 GGSVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTG 61
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +GV ++R I +G
Sbjct: 62 VAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASR-IRTQGLG 120
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFP 184
PI +N T G+ N+R+EI + P
Sbjct: 121 PANPIASNSTAEGKAQNRRVEITLSP 146
>gi|322830754|ref|YP_004210781.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
gi|321165955|gb|ADW71654.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
Length = 220
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ K L + + G +D E + + +++ TG+ V+R GD I +P
Sbjct: 53 SSSKHDRGKGALIGAAAGAALGGGAGYYMDVQEAKLRDKMKGTGVSVTRQGDNIVLNMPN 112
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+V+F + L+ L +A +L ++P T + + +TDS GT N+ +SQ+RAD +
Sbjct: 113 NVTFDTNSSTLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGTRALNMKLSQQRADGV 172
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S LI +GV +R + G PI N T+ G+ N+R+EI + P
Sbjct: 173 GSALITQGVEGSRVHTT-GAGPDNPIAGNSTEAGKAQNRRVEITLSP 218
>gi|262068085|ref|ZP_06027697.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693]
gi|291378171|gb|EFE85689.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693]
Length = 183
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 5/187 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + + + + C + + K + + + +S ED
Sbjct: 1 MKKRIFAVLILALLATACSGSKKVIKNTGVGVDSANKYAIEDTEASKKPLEDII--VFNQ 58
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G+ + R G+ + +P + F + +++ P L +A L + I I +TD
Sbjct: 59 EGVTIRREGNNLILSMPELILFDFDKYAVKEGIKPSLATLAKALGENKDIHIKIDGYTDF 118
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
IGT NL +S +RA IK +LI +G + IS+ G+ + P DTN T GR N+R+E
Sbjct: 119 IGTEAYNLDLSVKRARAIKDFLISKGAIGSN-ISIEGYGEQNPADTNQTAAGRSRNRRVE 177
Query: 180 IQIFPRG 186
I RG
Sbjct: 178 F-IISRG 183
>gi|163801079|ref|ZP_02194979.1| putative lipoprotein [Vibrio sp. AND4]
gi|159175428|gb|EDP60225.1| putative lipoprotein [Vibrio sp. AND4]
Length = 219
Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 39/216 (18%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG---------------------- 44
+++ ++ ++GC R+ +++N T
Sbjct: 3 IALALVLALTGCQATQRQNATTGEYETNSTTQGALIGAIAGAAIGLAVGDNAKERRKGAL 62
Query: 45 --------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVSEVF-L 88
D+ E E + L ++G+ V R+G + + + + F S + L
Sbjct: 63 IGAAAGGATGAGVGYYFDQQEAELRRALLNSGVQVERVGENQLLLRMENGIGFTSSSYQL 122
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ L+ +A IL ++P T + I +TDS G+ N +S+ RA+ ++ YL+ + V++
Sbjct: 123 DSSIHNTLRGVARILVEYPDTSLVIDGYTDSTGSDSYNQTLSERRAESVRQYLVSQNVAA 182
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R I RG+ + PI +N T GR N+R+EIQI P
Sbjct: 183 GRAI-ARGYGERNPICSNQTSDGRACNRRVEIQILP 217
>gi|262402450|ref|ZP_06079011.1| outer membrane protein [Vibrio sp. RC586]
gi|262351232|gb|EEZ00365.1| outer membrane protein [Vibrio sp. RC586]
Length = 223
Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD----------------------- 37
M+ + L + + +SGC R+ ++N
Sbjct: 1 MLNKATLLLAAVVALSGCQATQRQNATTGETETNSATKGALLGAIAGAAVGLATGDDAKE 60
Query: 38 -------------IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFV 83
V G D+ E E + L D+G+ V R+G + + + + F
Sbjct: 61 RRKHALIGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRMENGIGFT 120
Query: 84 SEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
S + L+ L+ +A IL ++P T + I+ HTDS G+ N ++S++RA+ ++++L+
Sbjct: 121 SSSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVRAFLL 180
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV++ R I RG ++P+ +N T GR N+R+EIQI P
Sbjct: 181 SQGVAAGRAI-ARGNGERFPLCSNSTAEGRACNRRVEIQILP 221
>gi|146308664|ref|YP_001189129.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145576865|gb|ABP86397.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 218
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
G+ I + +++ K L + +G +D E + + LQ TG+ V
Sbjct: 39 GIGAVTGAAIGAATSSKKDRAKGALIGAAVGGAAGGGYGYYVDTQEAKLRQTLQGTGVQV 98
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
R GD + +P +++F + + F P L + + +F + I HTDS G+ +
Sbjct: 99 QRNGDDLKLIMPGNITFASNSADISSSFYPTLNSLVLVFKEFNKNGVNIVGHTDSTGSQE 158
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +S RA + + + + IS G PI +N T GR N+R+EI + P
Sbjct: 159 LNQSLSSRRAQSVAN-YLTANGVPGQRISAYGAGPSQPIASNATDAGRAQNRRVEINLRP 217
>gi|88810246|ref|ZP_01125503.1| OmpA-OmpF family porin [Nitrococcus mobilis Nb-231]
gi|88791876|gb|EAR22986.1| OmpA-OmpF family porin [Nitrococcus mobilis Nb-231]
Length = 230
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV- 83
+ + L + + G +D E + + ++Q TG+ V+R GD I +P +V+F
Sbjct: 70 RGRGALIGAASGAALGGGVGYYMDVQEAKLREKMQGTGVSVTRQGDAIILNMPNNVTFDI 129
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L+ L +A +L ++ T + + HTDS G +N+ +S++RAD + S LI
Sbjct: 130 DSSSLKPAGANTLTGVAMVLKEYDQTGVNVVGHTDSTGGHAHNMKLSKKRADSVASSLII 189
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ + I G PI +N T GR N+R+EI + P
Sbjct: 190 Q-GVAANRIRTAGVGPDDPIASNSTAEGRAQNRRVEITLTP 229
>gi|332968653|gb|EGK07706.1| OmpA family protein [Psychrobacter sp. 1501(2011)]
Length = 217
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVH 79
+ + ++ G+ ++ + + + Q+ TG+ V G I +P +
Sbjct: 48 SKVTGGDKTGRDAAIGAVLGGAVGTYMENQKRQLEQQMAGTGVEVKHDGQGNIDLIMPGN 107
Query: 80 VSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++F + F L +A+ +N++ T + + HTDS+G N +SQ RA +
Sbjct: 108 ITFAHDSTNINPSFYNTLDKLASTMNQYNQTTVTVMGHTDSVGNPTYNQGLSQRRAQSVA 167
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
YL+ RGVS R I G+ PI N T+ GR N+R+EI++ N++
Sbjct: 168 GYLVNRGVSGAR-IQTLGYGQSQPIADNSTEQGRMQNRRVEIKLNAPQNLR 217
>gi|307578587|gb|ADN62556.1| OmpA family protein [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 240
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 91/172 (52%), Gaps = 4/172 (2%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
++G + ++++ + + + G+ D+ E + + +TGI V R GD IT
Sbjct: 60 LLTG--KNATKRRQRAMIAAGIGALGGAAIGNYQDRQERALRERTANTGIDVKRDGDNIT 117
Query: 74 CYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+P ++F + L+ +F L+ +A+ L ++ T+I + +TDSIG+ N +S++
Sbjct: 118 LNLPDGITFDFGKSMLKPQFYGALKNVASTLREYNQTMIEVVGYTDSIGSDVVNQRLSED 177
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA + SYL +GV R + G +YPI N T+ GR N+R+EI + P
Sbjct: 178 RAGAVASYLAAQGVQRERM-EISGMGKRYPIADNSTEAGRSKNRRVEIHLIP 228
>gi|238020688|ref|ZP_04601114.1| hypothetical protein GCWU000324_00578 [Kingella oralis ATCC 51147]
gi|237867668|gb|EEP68674.1| hypothetical protein GCWU000324_00578 [Kingella oralis ATCC 51147]
Length = 224
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 2/187 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
I + L G A K + + V G +D E + + QLQ +
Sbjct: 32 ISKTALYGLGGAATCGIVGALTHGGKGARNSALACGAVGAGVGGYMDYQEKKLREQLQGS 91
Query: 62 GIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G+ V R GD I +P V+F + L + L A L + T I I HTD+
Sbjct: 92 GVAVDRQGDQIKLTMPAAVTFATNSATLSAQAQNSLSQAAQTLATYTDTTITIVGHTDNT 151
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G N +S RA + + + + + +SV G + P+ N T+ GR N+R+EI
Sbjct: 152 GNDAINNPLSYNRAQSVAN-YLNQHGVAANRMSVSGQGSRQPVADNSTEAGRAQNRRVEI 210
Query: 181 QIFPRGN 187
I P N
Sbjct: 211 LINPDQN 217
>gi|332878199|ref|ZP_08445928.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332683937|gb|EGJ56805.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 229
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 84/222 (37%), Gaps = 36/222 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKK------------------------------VFL 30
M K L++ + C + K +
Sbjct: 1 MKKIAVLTLSAAILLVSCDAYNNSNKTQRGAVIGAAGGALLGAILGNNIGNGQNSELGAV 60
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH---VSFVSEVF 87
+ G+ +DK + + ++ G V R+ D I + ++
Sbjct: 61 LGTVVGGAAGAVIGNQMDKQAKKIEEEIP--GAEVKRVDDGIVVTFDENSGVYFETAKHN 118
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
+ +K L + +L ++P T + + +TDS+G + N+ +S+ RA + +Y G++
Sbjct: 119 INEKSKETLNKLIAVLKEYPETNVVVAGYTDSVGKDEYNMGLSKRRAQSVTNYFTSNGLA 178
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
++R + + F + P+ N T GR N+R+ + I P +K
Sbjct: 179 ASR-FTTKWFGEQNPVADNGTPEGRAKNRRVNVVIVPNEKMK 219
>gi|15836965|ref|NP_297653.1| hypothetical protein XF0363 [Xylella fastidiosa 9a5c]
gi|9105193|gb|AAF83173.1|AE003888_6 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 242
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 91/172 (52%), Gaps = 4/172 (2%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
++G + ++++ + + + G+ D+ E + + +TGI V R GD IT
Sbjct: 62 LLTG--KNATKRRQRAMIAAGIGALGGAAIGNYQDRQERALRERTANTGIDVKRDGDNIT 119
Query: 74 CYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+P ++F + L+ +F L+ +A+ L ++ T+I + +TDSIG+ N +S++
Sbjct: 120 LNLPDGITFDFGKSMLKPQFYGALKNVASTLREYNQTMIEVVGYTDSIGSDVVNQRLSED 179
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA + SYL +GV R + G +YPI N T+ GR N+R+EI + P
Sbjct: 180 RAGAVASYLAGQGVQRERM-EISGMGKRYPIADNSTEAGRSKNRRVEIHLIP 230
>gi|71276562|ref|ZP_00652836.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Xylella fastidiosa
Dixon]
gi|71900206|ref|ZP_00682345.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|170730945|ref|YP_001776378.1| OmpA family protein [Xylella fastidiosa M12]
gi|182682310|ref|YP_001830470.1| OmpA/MotB domain-containing protein [Xylella fastidiosa M23]
gi|71162633|gb|EAO12361.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Xylella fastidiosa
Dixon]
gi|71730039|gb|EAO32131.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|167965738|gb|ACA12748.1| OmpA family protein [Xylella fastidiosa M12]
gi|182632420|gb|ACB93196.1| OmpA/MotB domain protein [Xylella fastidiosa M23]
Length = 241
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 91/172 (52%), Gaps = 4/172 (2%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
++G + ++++ + + + G+ D+ E + + +TGI V R GD IT
Sbjct: 61 LLTG--KNATKRRQRAMIAAGIGALGGAAIGNYQDRQERALRERTANTGIDVKRDGDNIT 118
Query: 74 CYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+P ++F + L+ +F L+ +A+ L ++ T+I + +TDSIG+ N +S++
Sbjct: 119 LNLPDGITFDFGKSMLKPQFYGALKNVASTLREYNQTMIEVVGYTDSIGSDVVNQRLSED 178
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA + SYL +GV R + G +YPI N T+ GR N+R+EI + P
Sbjct: 179 RAGAVASYLAAQGVQRERM-EISGMGKRYPIADNSTEAGRSKNRRVEIHLIP 229
>gi|254463375|ref|ZP_05076791.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2083]
gi|206679964|gb|EDZ44451.1| OmpA family domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 222
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 47/214 (21%), Positives = 80/214 (37%), Gaps = 35/214 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-------------------- 44
L +S + ++ C R K+ + G
Sbjct: 8 LAISAASLLALTACATPERSANNNDFKKTTTGAAIGAGLGVIAGLISGDDSKERKQNAIK 67
Query: 45 -------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEK 90
+ LDK E Q L + + ++ GD + +P ++F L
Sbjct: 68 GALIGGAGGAVVGNVLDKQAAELQKSLGNDRVTITNTGDRLIVSLPQDITFASDSATLSS 127
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L +AT L +P++ + + HTDS G N +S +RA+ + + L GVS R
Sbjct: 128 GIQSDLNAVATNLQSYPNSTVQVIGHTDSTGEAGYNQNLSVQRANSVVNVLAGAGVSFTR 187
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ G P+ +N T+ G+ N+R+EI I P
Sbjct: 188 LQGI-GRGEDQPVASNLTEEGKAQNRRVEIVILP 220
>gi|257470361|ref|ZP_05634452.1| Outer membrane porin F [Fusobacterium ulcerans ATCC 49185]
gi|317064570|ref|ZP_07929055.1| outer membrane porin F [Fusobacterium ulcerans ATCC 49185]
gi|313690246|gb|EFS27081.1| outer membrane porin F [Fusobacterium ulcerans ATCC 49185]
Length = 186
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 4/170 (2%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
++GC + K + + + V + S E+ + G+ + R G+ +
Sbjct: 15 ILTGCSSVDNQPLKELVIEETENQFVMEDIDVSKKTLEEII--VFNEKGVTIRREGNNLV 72
Query: 74 CYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+P V F ++ ++ K L +A L + P I I +TD IG+ NL +S +
Sbjct: 73 LSMPELVLFDFNKYEVKNKIKGSLNALAKALEENPDIRIKIDGYTDFIGSEGYNLELSVK 132
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD IK + IS+ G+ + PI +N T+ GR N+R+E I
Sbjct: 133 RADAIKD-YLTNKGVKASNISIEGYGKQNPIASNQTETGRAKNRRVEFII 181
>gi|28199574|ref|NP_779888.1| OmpA family protein [Xylella fastidiosa Temecula1]
gi|28057689|gb|AAO29537.1| OmpA family protein [Xylella fastidiosa Temecula1]
Length = 242
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 91/172 (52%), Gaps = 4/172 (2%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
++G + ++++ + + + G+ D+ E + + +TGI V R GD IT
Sbjct: 62 LLTG--KNATKRRQRAMIAAGIGALGGAAIGNYQDRQERALRERTANTGIDVKRDGDNIT 119
Query: 74 CYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+P ++F + L+ +F L+ +A+ L ++ T+I + +TDSIG+ N +S++
Sbjct: 120 LNLPDGITFDFGKSMLKPQFYGALKNVASTLREYNQTMIEVVGYTDSIGSDVVNQRLSED 179
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA + SYL +GV R + G +YPI N T+ GR N+R+EI + P
Sbjct: 180 RAGAVASYLAAQGVQRERM-EISGMGKRYPIADNSTEAGRSKNRRVEIHLIP 230
>gi|169634041|ref|YP_001707777.1| putative outer membrane protein [Acinetobacter baumannii SDF]
gi|169152833|emb|CAP01862.1| putative outer membrane protein [Acinetobacter baumannii]
Length = 217
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K ++ G ++ + + ++ G LD+ E + + Q+ TG
Sbjct: 33 KATLGTLIGAAAGYGISKSNANSSRQNNRAAAIGAVLGAAGGLYLDQKEKKLREQMAGTG 92
Query: 63 IVVSRIGDM-ITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V R D + +P ++F + + ++ F L +A L + + I + +TD+
Sbjct: 93 VEVGRNPDGSVQLIMPGSITFDTNKSNIKPNFYATLDKVAQTLAEDNKSAILVTGYTDNT 152
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G N+ +SQ RA +K+YL +GV S+R I +G+ PI N T GR+ N+R+EI
Sbjct: 153 GNDSINIPLSQARAQSVKNYLAGKGVPSSR-IDAQGYGSSNPIADNSTASGREQNRRVEI 211
Query: 181 QIFPR 185
I+ +
Sbjct: 212 SIYAK 216
>gi|71901865|ref|ZP_00683927.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|71728370|gb|EAO30539.1| OmpA/MotB [Xylella fastidiosa Ann-1]
Length = 241
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 91/172 (52%), Gaps = 4/172 (2%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
++G + ++++ + + + G+ D+ E + + +TGI V R GD IT
Sbjct: 61 LLTG--KNATKRRQRAMIAAGIGALGGAAIGNYQDRQERALRERTANTGIDVKRDGDNIT 118
Query: 74 CYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+P ++F + L+ +F L+ +A+ L ++ T+I + +TDSIG+ N +S++
Sbjct: 119 LNLPDGITFDFGKSMLKPQFYGALKNVASTLREYNQTMIEVVGYTDSIGSDVVNQRLSED 178
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA + SYL +GV R + G +YPI N T+ GR N+R+EI + P
Sbjct: 179 RAGAVASYLAAQGVQRERM-EISGMGKRYPIADNSTEAGRSKNRRVEIHLIP 229
>gi|90581117|ref|ZP_01236916.1| Putative OmpA family protein [Vibrio angustum S14]
gi|90437638|gb|EAS62830.1| Putative OmpA family protein [Vibrio angustum S14]
Length = 229
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ I + ++ K L + + G +D E + + QL +GI V
Sbjct: 49 IIGALAGAAIGVASSSKHDRGKGALIGAASGAALGGGIGYYMDVQEAKLRKQLSSSGITV 108
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P ++F + L + + L +A + ++ T + + TDS G
Sbjct: 109 TRNGDNIVLNMPNEITFGFDQANLNDRAMNALHNVAIVAKEYEKTQLNVLGFTDSKGAAS 168
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
NL +SQ RAD + +YLI++GV++NR +S +G PI +N T GR N+R+EI + P
Sbjct: 169 YNLRLSQVRADAVANYLIRQGVNANRVVS-QGRGESNPIASNSTANGRAQNRRVEIILSP 227
>gi|325295240|ref|YP_004281754.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065688|gb|ADY73695.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 251
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 51/243 (20%), Positives = 89/243 (36%), Gaps = 59/243 (24%)
Query: 1 MIKELGLSMFIMTTISGCGLA------------------------------------SRE 24
M + L L + GC
Sbjct: 1 MKRILALFTVSTLFLGGCATTQTQQGQVTTNKTNKTAAGAAIGAVVGGTLGAVTGPRDAN 60
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL---------------------QDTGI 63
K K L + ++ G LD+ ++ L ++ +
Sbjct: 61 KGKRVLIGAIAGALIGGTIGYILDQQANQISKDLGVKPIDNTNPEAPQVTGAPITENKPV 120
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V + + + + V F + L+ + L+ +A L++ P TVI I TDS G+
Sbjct: 121 AVVKEPNRVRVVLKDSVLFGFNSYQLKPEAKETLRRLARTLSQNPDTVIVISGFTDSTGS 180
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N+ +S++RA+ +K+ L+ GV R + V G K PI N+T GR N+R+EI +
Sbjct: 181 FDYNVRLSEKRAESVKNELVLNGVDPTRIL-VFGCGPKKPIAPNNTPEGRALNRRVEILV 239
Query: 183 FPR 185
+P+
Sbjct: 240 YPK 242
>gi|332969616|gb|EGK08634.1| OmpA family protein [Kingella kingae ATCC 23330]
Length = 258
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 85/214 (39%), Gaps = 28/214 (13%)
Query: 3 KELGLSMFIMTTISGCGLASREKKK--------------------------VFLHKSNDT 36
K + ++ +SGC ++ +++ + +
Sbjct: 44 KLIIIATTSALALSGCVTNAQGQQQASKTAVYGVGAAVACGIVGALTHGSTGARNSALAC 103
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPM 95
+ G +D E + + QL +TG+ V R G+ I +P +V+F L
Sbjct: 104 GALGAGVGGYMDYQETKLREQLANTGVEVERQGNQIKLTMPENVTFATGRYDLSPAAQSA 163
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L A L + T I I HTDS G+ N +S RA+ + S + + + +SV
Sbjct: 164 LANAAQTLATYNETTITIVGHTDSTGSDAINNPLSYNRANAVAS-YLNQRGVAANRMSVS 222
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
G + PI N T GR N+R+EI I P N +
Sbjct: 223 GQGSRQPIADNSTDYGRAQNRRVEILINPNPNAQ 256
>gi|254510549|ref|ZP_05122616.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
gi|221534260|gb|EEE37248.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
Length = 223
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 81/216 (37%), Gaps = 34/216 (15%)
Query: 5 LGLSMFIMTTISGCGLASR-----EKKKVFLHKSNDTDIVNKRFG--------------- 44
L + + + C + + + ++ G
Sbjct: 8 LTVGLCSALFLGACADPGTLNLPADPNQNAKQGALLGGLIGAGVGAIANDSDPLLGALAG 67
Query: 45 ------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKK 91
+ LD+ E + QL + GI+++ GD + +P ++F +
Sbjct: 68 GAIGAAGGGVIGNQLDRQAAELRQQLANDGIIITNAGDRLIVTVPNDITFATDSSTVNPA 127
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L + L ++P++ + + HTDS G N +S+ RA + L GV+ R
Sbjct: 128 LRADLVRVGQNLVRYPNSSVQVIGHTDSTGEASYNQGLSERRARSVADILQANGVNGAR- 186
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S G P +N T GR N+R++I+I P GN
Sbjct: 187 LSTIGLGENRPAASNLTPEGRARNRRVDIEIIPNGN 222
>gi|119944065|ref|YP_941745.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37]
gi|119862669|gb|ABM02146.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37]
Length = 215
Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 32/214 (14%)
Query: 1 MIKELGLSMFIMTTISGC-----GLASREKKKVFLHK----------------------- 32
M K+L ++ ++T +SGC ++
Sbjct: 1 MNKKLVTALMVVTLLSGCVNRQNATTGEQEMNTATKSAIGGAIAGALAGAATGKKNGALF 60
Query: 33 -SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM--ITCYIPVHVSFVSEVFLE 89
+ + G D+ E + +L ++G+ V R+G+ L
Sbjct: 61 GAVGGAAIGGGVGYYFDQQEAALRQELLNSGVQVKRVGEYELQLIMADGIGFDTGNYQLS 120
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L +A +LN++P + + I HTDS+G+ ++NL +S+ RA+ + +YL+QR V S
Sbjct: 121 GSIFSTLNGVAKVLNEYPKSSLRIIGHTDSVGSSESNLTLSERRAESVSNYLMQRNVKSG 180
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R +S G+ + PI TNDT GR N+R+EI I
Sbjct: 181 R-LSTLGYGERRPIATNDTPYGRAANRRVEINII 213
>gi|258626412|ref|ZP_05721259.1| putative lipoprotein [Vibrio mimicus VM603]
gi|258581464|gb|EEW06366.1| putative lipoprotein [Vibrio mimicus VM603]
Length = 223
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD----------------------- 37
M+ + L + + +SGC R+ ++N T
Sbjct: 1 MLNKATLLLAAVVALSGCQATQRQNATTGEMETNSTTKGALLGALAGAAVGLATGDDAKE 60
Query: 38 -------------IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFV 83
V G D+ E E + L D+G+ V R+G + + + + F
Sbjct: 61 RRKHALIGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRMENGIGFT 120
Query: 84 SEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
S + L+ L+ +A IL +P T + I+ HTDS G+ N ++S++RA+ ++++L+
Sbjct: 121 SSSYQLDSYIHKTLRGVARILVAYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVRAFLL 180
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV++ R I RG ++P+ +N+T GR N+R+EIQI P
Sbjct: 181 SQGVAAGRAI-ARGNGERFPLCSNNTAEGRACNRRVEIQILP 221
>gi|89074695|ref|ZP_01161153.1| Putative OmpA family protein [Photobacterium sp. SKA34]
gi|89049459|gb|EAR55020.1| Putative OmpA family protein [Photobacterium sp. SKA34]
Length = 229
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ I + ++ K L + + G +D E + + QL +GI V
Sbjct: 49 IIGALAGAAIGVASSSKHDRGKGALIGAASGAALGGGIGYYMDVQEAKLRKQLSSSGITV 108
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P ++F + L + + L +A + ++ T + + TDS G
Sbjct: 109 TRNGDNIVLNMPNEITFGFDQANLNDRAMNALHNVAIVAKEYEKTQLNVLGFTDSKGAES 168
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
NL +SQ RAD + +YLI++GV++NR +S +G PI +N T GR N+R+EI + P
Sbjct: 169 YNLRLSQVRADAVANYLIRQGVNANRVVS-QGRGESNPIASNSTSNGRAQNRRVEIILSP 227
>gi|50084108|ref|YP_045618.1| putative outer membrane protein [Acinetobacter sp. ADP1]
gi|49530084|emb|CAG67796.1| putative outer membrane protein [Acinetobacter sp. ADP1]
Length = 217
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
++ G +S + + I+ G LD+ E + + Q+ TG+ V+R
Sbjct: 38 TLIGAAAGYGISKSSANSSRQNNRAAAIGAILGGASGLYLDQKEKKLRQQMAGTGVEVNR 97
Query: 68 IGDM-ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
D + +P +++F ++ ++ F L +A L + + I + +TD+ G
Sbjct: 98 NPDGSVGLVMPGNITFDTNKSNIKPNFYSTLNKVAQTLAEDNKSAILVTGYTDNTGNDSI 157
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N+ +SQ RA + + + S+ I+ +G+ PI +N T GR+ N+R+EI I+ R
Sbjct: 158 NIPLSQARAQSVAN-YLSGQGVSSSRINAQGYGSSNPIASNATAQGREQNRRVEISIYER 216
>gi|258622653|ref|ZP_05717674.1| putative lipoprotein [Vibrio mimicus VM573]
gi|262171774|ref|ZP_06039452.1| outer membrane protein [Vibrio mimicus MB-451]
gi|258585109|gb|EEW09837.1| putative lipoprotein [Vibrio mimicus VM573]
gi|261892850|gb|EEY38836.1| outer membrane protein [Vibrio mimicus MB-451]
Length = 223
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD----------------------- 37
M+ + L + + +SGC R+ ++N T
Sbjct: 1 MLNKATLLLAAVVALSGCQATQRQNATTGEMETNSTTKGALLGALAGAAVGLATGDDAKE 60
Query: 38 -------------IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFV 83
V G D+ E E + L D+G+ V R+G + + + + F
Sbjct: 61 RRKHALIGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRMENGIGFT 120
Query: 84 SEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
S + L+ L+ +A IL +P T + I+ HTDS G+ N ++S++RA+ ++++L+
Sbjct: 121 SSSYQLDSYIHKTLRGVARILVAYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVRAFLL 180
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV++ R I RG ++P+ +N T GR N+R+EIQI P
Sbjct: 181 SQGVAAGRAI-ARGNGERFPLCSNSTAEGRACNRRVEIQILP 221
>gi|326336372|ref|ZP_08202543.1| lipoprotein PG3 [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691546|gb|EGD33514.1| lipoprotein PG3 [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 231
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 89/223 (39%), Gaps = 36/223 (16%)
Query: 1 MIKELGLSMFIMTTISGCGL--ASREKKKVFLHKSNDTDIVNKRFGS------------- 45
+ + + L + + ++GC S + ++ + + I+ G+
Sbjct: 4 VFRNITLFLVTASLLAGCEAYNNSNKTQRGAVVGAASGAILGAILGNNVGSGGNSELGAV 63
Query: 46 ---------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH---VSFVSEVF 87
+D+ + + ++ G V R+ D I ++
Sbjct: 64 IGTAVGGAAGAIIGNQMDRQAKKIEEEIP--GAEVKRVDDGIVVTFDEKSGVTFEFNKAT 121
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L + +L + ++L ++P T + + HTDS G N+ +S++RA + ++ G++
Sbjct: 122 LTSEAQTILNKMVSVLKEYPDTNVIVAGHTDSTGKAAYNMTLSEKRAKAVTNFFTTNGLN 181
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
++R + + F P N T GR N+R+ + I P +K+
Sbjct: 182 ASR-FTTKWFGATQPAYDNSTAEGRAKNRRVNVVIVPNEKMKE 223
>gi|218783104|ref|YP_002434422.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218764488|gb|ACL06954.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 217
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 5/167 (2%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G E K L S V G + K E Q+ +T + V D + +
Sbjct: 53 GSTQGEMGKGALIGSVAGAAVGTAVGHKMGKQAQEL-EQIPNTQVEVQ--EDKVVVTMDN 109
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ F + ++ L+ IA ++ K+P T I ++ HTDS G + N +S+ RA+V+
Sbjct: 110 SILFAVNSSTVQPAAQGTLRDIAQVMVKYPDTQIMVKGHTDSTGGEEYNQQLSERRANVV 169
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
K+ LI I+ G PI +NDT GR N+R+EI++ P
Sbjct: 170 KNILIS-YGVPAHRITAIGLGEVMPIASNDTPDGRAMNRRVEIEVRP 215
>gi|311277523|ref|YP_003939754.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
gi|308746718|gb|ADO46470.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
Length = 220
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 36/219 (16%)
Query: 1 MIKELGLSMFI---MTTISGC-------------------------------GLASREKK 26
M K + + + ISGC + +++
Sbjct: 1 MKKRVLMIAAMVSGALVISGCTTNPYTGEREAGKSGIGAGLGALAGAGIGALSSSKKDRG 60
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
K L + V G +D E + + ++Q TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAAVGGGIGYYMDVQEAKLRQKMQGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++ T + + +TDS G+ N+ +SQ+RAD + S LI +
Sbjct: 121 ANLKPAGANTLTGVAMVLKEYEKTAVNVVGYTDSTGSKDLNMRLSQQRADSVASSLITQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I G PI +N T G+ N+R+EI + P
Sbjct: 180 GVAANRIRTTGMGQANPIASNSTAEGKAQNRRVEITLSP 218
>gi|170728573|ref|YP_001762599.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169813920|gb|ACA88504.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 224
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ K L + + G +D E E + QLQ TG+ V+R GD I +P
Sbjct: 57 SSSKSDRGKGALIGAASGAALGGGIGYYMDTQEAELRKQLQSTGVSVTRSGDNIILNMPN 116
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V+F V E L +L +A + ++ T + + TDS G+ NL +S+ RA +
Sbjct: 117 EVTFGVDETHLSAGAKRVLNSVALVAKEYDKTRLNVLGFTDSSGSESYNLRLSKVRAVEV 176
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
YL+ + V R S G + PI +N TK GR N+R+EI + P
Sbjct: 177 ADYLVSQKVEYVRVKS-DGMGEERPIASNATKEGRAENRRVEIILSP 222
>gi|319764890|ref|YP_004128827.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
gi|330827094|ref|YP_004390397.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
K601]
gi|317119451|gb|ADV01940.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
gi|329312466|gb|AEB86881.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
Length = 214
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKK-------------------------KVFLHKSN 34
M K L + ++ ++ +GC S ++ + +
Sbjct: 1 MRKPLLIGTVAVVMLATGCADMSETQRRTAIGAGAGALGGAAIGAMTGGRAGTGAVIGAG 60
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKF 92
+ + ++K + E Q Q TG+ V++ D + IP +SF + ++ F
Sbjct: 61 VGALGTYIWSQHMEKQKQEMQAATQGTGVTVTQTADNQLKLDIPSDISFATNRSDIQPSF 120
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
P+L A L P+ + I HTDS G N +S +RA ++YL RGVS R I
Sbjct: 121 RPILDRFAEGLRNNPNAEVRIIGHTDSTGNDAINDPLSLDRATSTRNYLTARGVSGAR-I 179
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
V G + PI +NDT GR N+R+EI
Sbjct: 180 HVDGRGSREPIASNDTAEGRARNRRVEI 207
>gi|117919117|ref|YP_868309.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117611449|gb|ABK46903.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 230
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ K L + V G +D E + + QL TG+ V+R GD I +P V+
Sbjct: 65 KSDRGKGALIGAASGAAVGGGIGYYMDVQETKLRQQLASTGVSVTRDGDNIVLNMPNEVT 124
Query: 82 F-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F V + L +L +A + ++ T + + +TDS G+ NL +SQ RA + +Y
Sbjct: 125 FGVDQTELSDGAKRVLNSVALVAKEYSKTQLNVLGYTDSSGSDSYNLRLSQVRASEVGNY 184
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
L+ +GV+S R S +G PI +N GR N+R+EI + P G
Sbjct: 185 LMSKGVASARVKS-KGMGEASPIASNANAAGRAQNRRVEIVLTPTGQ 230
>gi|119476926|ref|ZP_01617207.1| ompA family protein [marine gamma proteobacterium HTCC2143]
gi|119449733|gb|EAW30970.1| ompA family protein [marine gamma proteobacterium HTCC2143]
Length = 213
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 50/212 (23%), Positives = 98/212 (46%), Gaps = 29/212 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN--------------------- 40
+K++ +S+ + ++ C ++ + +
Sbjct: 4 LKKI-ISISTLAILTACTTNPYTSERKASNTALYGAGAAIICGIIGSRESSKHARNAAAG 62
Query: 41 -----KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLP 94
G+ +D E + QLQ +G+ V R GD I +P ++F ++ + L + F P
Sbjct: 63 CGAIGAGIGAYMDVQESALREQLQGSGVRVVREGDNIRLIMPGSITFETDSYVLRRSFSP 122
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+L+ + +L K+ T++ + HTD+ G + N +S++RA + S L+ +GV NR + +
Sbjct: 123 VLESVGLVLAKYNETMMRVTGHTDNTGGEQYNQRLSEDRAQSVASNLMSQGVDGNR-LYI 181
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+G PI N+T GR +N+R+E+ I P
Sbjct: 182 QGSGETMPIADNNTSSGRASNRRVELYILPNN 213
>gi|238783060|ref|ZP_04627087.1| Inner membrane lipoprotein yiaD [Yersinia bercovieri ATCC 43970]
gi|238716061|gb|EEQ08046.1| Inner membrane lipoprotein yiaD [Yersinia bercovieri ATCC 43970]
Length = 219
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ K L + + G +D E + + ++ TG+ V+R GD I +P
Sbjct: 53 SSSKHDRGKGALIGAAAGAALGGGAGYYMDVQEAKLREKMNGTGVSVTRQGDNIVLNMPN 112
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+V+F L+ L +A +L ++ T + + TDS G +N+ +SQ+RAD +
Sbjct: 113 NVTFDTDSSNLKPAGANTLTGVAMVLKEYDKTAVNVTGFTDSSGARAHNMTLSQQRADSV 172
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S LI + + + G P+ +N T G+ N+R+EI + P
Sbjct: 173 GSALIMQ-GVAANRVRTSGAGPDNPVASNSTAAGKAQNRRVEITLSP 218
>gi|126640934|ref|YP_001083918.1| putative outer membrane protein [Acinetobacter baumannii ATCC
17978]
gi|169796935|ref|YP_001714728.1| putative outer membrane protein [Acinetobacter baumannii AYE]
gi|184157155|ref|YP_001845494.1| outer membrane protein, related peptidoglycan-associated
(lipo)protein [Acinetobacter baumannii ACICU]
gi|213156662|ref|YP_002318323.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057]
gi|215484397|ref|YP_002326628.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB307-0294]
gi|239503181|ref|ZP_04662491.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB900]
gi|260555775|ref|ZP_05827995.1| type VI secretion system OmpA/MotB [Acinetobacter baumannii ATCC
19606]
gi|301347224|ref|ZP_07227965.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB056]
gi|301512729|ref|ZP_07237966.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB058]
gi|301597873|ref|ZP_07242881.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB059]
gi|332853740|ref|ZP_08434952.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332871140|ref|ZP_08439738.1| OmpA family protein [Acinetobacter baumannii 6013113]
gi|332874156|ref|ZP_08442080.1| OmpA family protein [Acinetobacter baumannii 6014059]
gi|126386818|gb|ABO11316.1| putative outer membrane protein [Acinetobacter baumannii ATCC
17978]
gi|169149862|emb|CAM87753.1| putative outer membrane protein [Acinetobacter baumannii AYE]
gi|183208749|gb|ACC56147.1| Outer membrane protein, related peptidoglycan-associated
(lipo)protein [Acinetobacter baumannii ACICU]
gi|213055822|gb|ACJ40724.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057]
gi|213988304|gb|ACJ58603.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB307-0294]
gi|260410686|gb|EEX03984.1| type VI secretion system OmpA/MotB [Acinetobacter baumannii ATCC
19606]
gi|322507052|gb|ADX02506.1| Putative outer membrane protein [Acinetobacter baumannii 1656-2]
gi|323516919|gb|ADX91300.1| Outer membrane protein, related peptidoglycan-associated
(lipo)protein [Acinetobacter baumannii TCDC-AB0715]
gi|332728426|gb|EGJ59801.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332731726|gb|EGJ63007.1| OmpA family protein [Acinetobacter baumannii 6013113]
gi|332737631|gb|EGJ68534.1| OmpA family protein [Acinetobacter baumannii 6014059]
Length = 217
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 3/180 (1%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
++ G ++ + + ++ G LD+ E + + Q+ TG+ V R
Sbjct: 38 TLIGAAAGYGISKSNANSSRQNNRAAAIGAVLGAAGGLYLDQKEKKLREQMAGTGVEVGR 97
Query: 68 IGDM-ITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
D + +P ++F + + ++ F L +A L + + I + +TD+ G
Sbjct: 98 NPDGSVQLIMPGSITFDTNKSNIKPNFYATLDKVAQTLAEDNKSAILVTGYTDNTGNDSI 157
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N+ +SQ RA +K+YL +GV S+R I +G+ PI N T GR+ N+R+EI I+ +
Sbjct: 158 NIPLSQARAQSVKNYLAGKGVPSSR-IDAQGYGSSNPIADNSTASGREQNRRVEISIYAK 216
>gi|113969010|ref|YP_732803.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113883694|gb|ABI37746.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 230
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ K L + V G +D E + + QL TG+ V+R GD I +P V+
Sbjct: 65 KSDRGKGALIGAASGAAVGGGIGYYMDVQETKLRQQLASTGVSVTRDGDNIILNMPNEVT 124
Query: 82 F-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F V + L +L +A + ++ T + + +TDS G+ NL +SQ RA + +Y
Sbjct: 125 FGVDQTELSDGAKRVLNSVALVAKEYSKTQLNVLGYTDSSGSDSYNLRLSQVRASEVGNY 184
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
L+ +GV+S R S +G PI +N GR N+R+EI + P G
Sbjct: 185 LMSKGVASARVKS-KGMGEASPIASNANAAGRAQNRRVEIVLTPTGQ 230
>gi|153949077|ref|YP_001403078.1| outer membrane lipoprotein [Yersinia pseudotuberculosis IP 31758]
gi|152960572|gb|ABS48033.1| OmpA family protein [Yersinia pseudotuberculosis IP 31758]
Length = 219
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 1 MIKELGL---SMFIMTTISGC-------------------------------GLASREKK 26
M K L + + +S C + ++
Sbjct: 1 MKKRLLAPVAIVSVALILSACTTNPYTGESQAGKSGYGAGIGAALGAGIGLLSSSKHDRG 60
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-E 85
K L + + G +D E + + ++ TG+ V+R G+ I +P +V+F +
Sbjct: 61 KGALIGAAAGAALGGGAGYYMDVQEAKLREKMSGTGVSVTRQGENIVLNMPNNVTFDTNS 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++ T + + +TDS G +N+++SQ+RAD + S LI +
Sbjct: 121 SNLKPAGANTLTGVAMVLKEYDKTAVNVTGYTDSTGARAHNIVLSQQRADNVASALIVQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I G P+ +N T G+ N+R+EI + P
Sbjct: 180 GVAANRIRTYGAGPDNPVASNSTAAGKAQNRRVEITLSP 218
>gi|238754016|ref|ZP_04615375.1| Inner membrane lipoprotein yiaD [Yersinia ruckeri ATCC 29473]
gi|238707768|gb|EEQ00127.1| Inner membrane lipoprotein yiaD [Yersinia ruckeri ATCC 29473]
Length = 219
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
G+ + I + +++ K L + + G +D E + + +++ TG+ V
Sbjct: 40 GIGAVLGAGIGVLSSSKKDRGKGALIGAAAGAALGGGAGYYMDVQEAKLRDKMRGTGVSV 99
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R GD I +P +V+F + L+ L +A +L ++ T + + +TDS G
Sbjct: 100 TRQGDNIVLNMPNNVTFDTNSSNLKPAGANTLTGVAMVLKEYEKTAVNVTGYTDSTGARA 159
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+N+++SQ+RA+ + S LI + + I G P+ TN T G+ N+R+EI + P
Sbjct: 160 HNMILSQQRAETVGSALITQ-GVAANRIRTIGAGPDNPVATNSTTAGKAQNRRVEITLSP 218
>gi|114048845|ref|YP_739395.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113890287|gb|ABI44338.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 230
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ K L + V G +D E + + QL TG+ V+R GD I +P V+
Sbjct: 65 KSDRGKGALIGAASGAAVGGGIGYYMDVQETKLREQLASTGVSVTRDGDNIILNMPNEVT 124
Query: 82 F-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F V + L +L +A + ++ T + + +TDS G+ NL +SQ RA + +Y
Sbjct: 125 FGVDQTELSDGAKRVLNSVALVAKEYSKTQLNVLGYTDSSGSDSYNLRLSQVRASEVGNY 184
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
L+ +GV+S R S +G PI +N GR N+R+EI + P G
Sbjct: 185 LMSKGVASARVKS-KGMGEASPIASNANAAGRAQNRRVEIVLTPTGQ 230
>gi|22127962|ref|NP_671385.1| putative outer membrane lipoprotein [Yersinia pestis KIM 10]
gi|45443710|ref|NP_995249.1| putative outer membrane lipoprotein [Yersinia pestis biovar
Microtus str. 91001]
gi|51598197|ref|YP_072388.1| outer membrane lipoprotein [Yersinia pseudotuberculosis IP 32953]
gi|108808999|ref|YP_652915.1| putative outer membrane lipoprotein [Yersinia pestis Antiqua]
gi|108813881|ref|YP_649648.1| putative outer membrane lipoprotein [Yersinia pestis Nepal516]
gi|145597343|ref|YP_001161418.1| putative outer membrane lipoprotein [Yersinia pestis Pestoides F]
gi|150260986|ref|ZP_01917714.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|162420588|ref|YP_001608097.1| putative outer membrane lipoprotein [Yersinia pestis Angola]
gi|165926066|ref|ZP_02221898.1| OmpA family protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165936922|ref|ZP_02225488.1| OmpA family protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166009516|ref|ZP_02230414.1| OmpA family protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213252|ref|ZP_02239287.1| OmpA family protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167398489|ref|ZP_02304013.1| OmpA family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421106|ref|ZP_02312859.1| OmpA family protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425514|ref|ZP_02317267.1| OmpA family protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167467912|ref|ZP_02332616.1| OmpA family protein [Yersinia pestis FV-1]
gi|170022281|ref|YP_001718786.1| putative outer membrane lipoprotein [Yersinia pseudotuberculosis
YPIII]
gi|186897420|ref|YP_001874532.1| putative outer membrane lipoprotein [Yersinia pseudotuberculosis
PB1/+]
gi|218931056|ref|YP_002348931.1| putative outer membrane lipoprotein [Yersinia pestis CO92]
gi|229839783|ref|ZP_04459942.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229841867|ref|ZP_04462023.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India
195]
gi|229896745|ref|ZP_04511909.1| putative lipoprotein [Yersinia pestis Pestoides A]
gi|229904405|ref|ZP_04519516.1| putative lipoprotein [Yersinia pestis Nepal516]
gi|270488345|ref|ZP_06205419.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294505605|ref|YP_003569667.1| putative lipoprotein [Yersinia pestis Z176003]
gi|21961106|gb|AAM87636.1|AE014011_3 putative outer membrane protein [Yersinia pestis KIM 10]
gi|45438580|gb|AAS64126.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001]
gi|51591479|emb|CAH23150.1| OmpA-OmpF family porin [Yersinia pseudotuberculosis IP 32953]
gi|108777529|gb|ABG20048.1| lipoprotein [Yersinia pestis Nepal516]
gi|108780912|gb|ABG14970.1| putative lipoprotein [Yersinia pestis Antiqua]
gi|115349667|emb|CAL22647.1| putative lipoprotein [Yersinia pestis CO92]
gi|145209039|gb|ABP38446.1| lipoprotein [Yersinia pestis Pestoides F]
gi|149290394|gb|EDM40471.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|162353403|gb|ABX87351.1| OmpA family protein [Yersinia pestis Angola]
gi|165915164|gb|EDR33775.1| OmpA family protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165921926|gb|EDR39103.1| OmpA family protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991438|gb|EDR43739.1| OmpA family protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205550|gb|EDR50030.1| OmpA family protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166961235|gb|EDR57256.1| OmpA family protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167050993|gb|EDR62401.1| OmpA family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167055528|gb|EDR65321.1| OmpA family protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169748815|gb|ACA66333.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
gi|186700446|gb|ACC91075.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
gi|229678523|gb|EEO74628.1| putative lipoprotein [Yersinia pestis Nepal516]
gi|229691206|gb|EEO83259.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India
195]
gi|229696149|gb|EEO86196.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700284|gb|EEO88319.1| putative lipoprotein [Yersinia pestis Pestoides A]
gi|262363769|gb|ACY60490.1| putative lipoprotein [Yersinia pestis D106004]
gi|262367705|gb|ACY64262.1| putative lipoprotein [Yersinia pestis D182038]
gi|270336849|gb|EFA47626.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294356064|gb|ADE66405.1| putative lipoprotein [Yersinia pestis Z176003]
gi|320017406|gb|ADW00978.1| putative lipoprotein [Yersinia pestis biovar Medievalis str. Harbin
35]
Length = 219
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 1 MIKELGL---SMFIMTTISGC-------------------------------GLASREKK 26
M K + + + +S C + ++
Sbjct: 1 MKKRILAPVAIVSVALILSACTTNPYTGESQAGKSGYGAGIGAALGAGIGLLSSSKHDRG 60
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-E 85
K L + + G +D E + + ++ TG+ V+R G+ I +P +V+F +
Sbjct: 61 KGALIGAAAGAALGGGAGYYMDVQEAKLREKMSGTGVSVTRQGENIVLNMPNNVTFDTNS 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++ T + + +TDS G +N+++SQ+RAD + S LI +
Sbjct: 121 SNLKPAGANTLTGVAMVLKEYDKTAVNVTGYTDSTGARAHNIVLSQQRADNVASALIVQ- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I G P+ +N T G+ N+R+EI + P
Sbjct: 180 GVAANRIRTYGAGPDNPVASNSTAAGKAQNRRVEITLSP 218
>gi|146328667|ref|YP_001209012.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
gi|146232137|gb|ABQ13115.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
Length = 225
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 1 MIKELGLSMFIMTTISGCGLASR--EKKKVFLHKSNDTDIVNKRFG-------------- 44
M K + + ISGC + + + G
Sbjct: 1 MKKIVLTASIAAFMISGCVSNGGGLSANQSAAIGTAVGALAGGVLGHQLNDDNGRYVGAA 60
Query: 45 ----------SSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKF 92
+ +D+ + + Q Q+Q TGI V RI + IP V F ++ + F
Sbjct: 61 AGALAGAAIGNYMDRQQQQLQQQVQGTGINVQRIDQGTLQLNIPGDVLFATDEYQIRPNF 120
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L +A +N++P T++ I HTDS G N +S+ RA+ YL+Q+GV+ R +
Sbjct: 121 YQTLNSVAQTMNQYPQTIVHIYGHTDSTGRAAYNQGLSERRANSAAQYLMQQGVNMQRIL 180
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S +G+ YP N T GR N+R+E+ I
Sbjct: 181 S-KGYGQNYPRANNATPDGRAQNRRVEVYI 209
>gi|78221730|ref|YP_383477.1| surface antigen protein [Geobacter metallireducens GS-15]
gi|78192985|gb|ABB30752.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Geobacter
metallireducens GS-15]
Length = 218
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 84/219 (38%), Gaps = 34/219 (15%)
Query: 2 IKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKR----------------- 42
+K L M ++GC + + V
Sbjct: 1 MKRTALCALTIAMAALTGCAQPMTRTQTGAALGTGVGAAVGAGLGQAIGRNTESTLIGAA 60
Query: 43 ------------FGSSLDKAEDEFQMQLQD-TGIVVSRIGDMITCYIPVHVSFV-SEVFL 88
G+ +DK E + + + G + R +++ + F + L
Sbjct: 61 AGALAGGLTGGAIGNYMDKQEQAMRQAVANVEGASIQRDQNVLAVTFKSDILFPINSAVL 120
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ + +A +L ++P+T I I HTDS G+ N +S+ RA +K+ L RGV+
Sbjct: 121 QPGANDEITRVAQVLTQYPATTITIAGHTDSTGSDALNQTLSERRATAVKNALAARGVAP 180
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
R ++ GF PI N T+ GR N+R+EI I P+
Sbjct: 181 ARMNAI-GFGKSKPIADNSTEAGRSMNRRVEITIVPQQQ 218
>gi|117620195|ref|YP_854667.1| putative outer membrane lipoprotein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561602|gb|ABK38550.1| inner membrane lipoprotein YiaD [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 218
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 33/215 (15%)
Query: 2 IKELGLSMFIMTTISGC-------------------------------GLASREKKKVFL 30
K L ++ ++ ++GC + ++KK L
Sbjct: 3 FKTLVPAVALLVALTGCTTNPYTGESQTSKGAWGALAGAATGAAVGALSSSKGDRKKGIL 62
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLE 89
+ G +D E + + +LQ TG+ V+R GD + +P +V+F S L+
Sbjct: 63 TGVAAGAALGGGIGYYMDVQEAKLREKLQGTGVSVTRNGDQLILNMPNNVTFDSSSAQLK 122
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L +A ++ +F T + + HTDS G+ + N+ +S +RAD + + LI +GV+ +
Sbjct: 123 AAGANTLSGVAMVVGEFDKTRLNVVGHTDSTGSRELNMKLSAQRADAVAAQLIGQGVTGS 182
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R IS G P+ TN T G+ N+R+ I + P
Sbjct: 183 R-ISTSGVGPDQPVATNSTAEGKAQNRRVTITLTP 216
>gi|326562151|gb|EGE12479.1| OmpA/MotB domain protein [Moraxella catarrhalis 7169]
gi|326565667|gb|EGE15830.1| OmpA/MotB domain protein [Moraxella catarrhalis 12P80B1]
gi|326566236|gb|EGE16388.1| OmpA/MotB domain protein [Moraxella catarrhalis 103P14B1]
gi|326567112|gb|EGE17234.1| OmpA/MotB domain protein [Moraxella catarrhalis BC1]
gi|326576199|gb|EGE26114.1| OmpA/MotB domain protein [Moraxella catarrhalis CO72]
Length = 224
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 5/181 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
+ + G ++ + + V G+ +++ + + Q+Q TG+ V+
Sbjct: 44 AVAGALGGTAISKATGGEKTGRDAILGAAVGAAAGAYMERQAKQIEQQMQGTGVTVTHDT 103
Query: 70 D--MITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
D I +P +++F + L FL L +A +N++ T I I HTDS G N
Sbjct: 104 DTGNINLTMPGNITFAHDDDTLNSAFLGRLNQLANTMNQYHETTIVIVGHTDSTGQAAYN 163
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-PR 185
+S+ RAD ++ YLI +GV R +V G+ + PI +N T+ GR N+R+E+ I P+
Sbjct: 164 QELSERRADSVRYYLINQGVDPYRIQTV-GYGMRQPIASNATEAGRAQNRRVELMILAPQ 222
Query: 186 G 186
G
Sbjct: 223 G 223
>gi|329847657|ref|ZP_08262685.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19]
gi|328842720|gb|EGF92289.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19]
Length = 208
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ +K + + + G+ +D+ + + +L+ + V+R GD I +P
Sbjct: 41 KKGDQARKNAILGAGIGALAGGGVGAYMDRQNKDLRSELEGRNVYVTRSGDNIILSMPGD 100
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
V+F L F+P+L +ATILN++PST I + H DS GT N+ +S+ RA+ +
Sbjct: 101 VTFSSGSADLNGGFMPVLNDVATILNQYPSTYIDVVGHADSQGTDAFNMDLSERRANAVA 160
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
YL+ + V S R I V G PI +NDT GR N+R+EI + P
Sbjct: 161 GYLVGQKVKSER-IYVAGAGESSPIASNDTADGRARNRRVEITLRP 205
>gi|24375456|ref|NP_719499.1| OmpA family protein [Shewanella oneidensis MR-1]
gi|24350304|gb|AAN56943.1|AE015827_15 OmpA family protein [Shewanella oneidensis MR-1]
Length = 228
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ K L + + G +D E + + QL TG+ V+R GD I +P V+
Sbjct: 64 KSDRGKGALIGAASGAALGGGIGYYMDVQETKLRQQLASTGVSVTRSGDNIILNMPNEVT 123
Query: 82 F-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F V + L +L +A + ++ T + + +TDS G+ NL +SQ RA + +Y
Sbjct: 124 FGVDQTELSDGAKRVLNSVALVAKEYSKTQLNVLGYTDSSGSDSYNLRLSQVRASEVGNY 183
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
L+ +GV+S R S +G PI +N GR N+R+EI + P G
Sbjct: 184 LMSKGVASARVKS-KGMGEASPIASNANAEGRAQNRRVEIVLTPTG 228
>gi|310780073|ref|YP_003968405.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
gi|309749396|gb|ADO84057.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
Length = 216
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLAS-----------------------------REKKKVFLH 31
M K+L + I+T +S C + + + L
Sbjct: 1 MTKKLLAAALIITALSACQSTNPYTREGQFNKTSKYAAGGAVVGAVAGQVIGKDTEGTLT 60
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFV-SEVFLE 89
+ + G D+ E + +L+ TG+ + R D + +P +++F +
Sbjct: 61 GAAAGTALGAGLGYYFDRQEAALRQELERTGVSLRRTADNTLELVMPGNLTFRTGSSDIN 120
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
F +L +ATIL ++ T I + HTD+ G+L N +SQERA+ + YL RGV S+
Sbjct: 121 SGFYDVLDSVATILVEYKDTTIFVSGHTDNTGSLATNQRLSQERANSVGRYLSSRGVLSS 180
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R IS +GF Y++PI +N T GR+ N+R+EI+I
Sbjct: 181 R-ISSQGFDYQFPIASNSTASGREQNRRVEIEIT 213
>gi|330504866|ref|YP_004381735.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328919152|gb|AEB59983.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 222
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 35/218 (16%)
Query: 1 MIKELGLSM-FIMTTISGCGLAS--------------------------------REKKK 27
M + +++ +SGC + + K
Sbjct: 1 MFRLSLIALCSSALLLSGCASQNPYDQSAPSSNRTATYGGLGALAGAAAGALINHDNRGK 60
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEV 86
L + +G DK E+E + +Q TG+ V R GD+I +P +++F
Sbjct: 61 GALIGAAVAGAAAAGYGYYADKQEEELRRSMQGTGVEVQRQGDVIQLIMPGNITFATDSA 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ F L +A ++ I + HTDS G+ +N+ +SQ RA + YL+ +G+
Sbjct: 121 QIASSFYQPLNNLANSFRQYNQNSIEVVGHTDSTGSHSHNMALSQRRAQSVADYLLAQGI 180
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+R +S RG P+ +N T GR N+R+E+ + P
Sbjct: 181 DPSR-VSTRGMGPDQPVASNATADGRAQNRRVEVTLRP 217
>gi|71066360|ref|YP_265087.1| OmpA/OmpF family outer membrane protein [Psychrobacter arcticus
273-4]
gi|71039345|gb|AAZ19653.1| outer membrane protein, OmpA/OmpF family [Psychrobacter arcticus
273-4]
Length = 217
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 90/218 (41%), Gaps = 31/218 (14%)
Query: 2 IKELGLSMFIM--TTISGCGLASREKKK----------------VFLHKSNDTDIVNKR- 42
++ + I ++GC ++ + K+ + +
Sbjct: 1 MRNTLMVAAIASGLVLTGCVTDPSTGQQRLNKTAIGALAGAAGGATISKATGGEKTGRDA 60
Query: 43 ---------FGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF-VSEVFLEKK 91
G +++ + + Q+ TG+ V+ + I +P ++F + L
Sbjct: 61 AIGAAIGAGVGYYMERQAKQLEQQMAGTGVTVTPNANGNIDLVMPGSITFSFDDATLNNS 120
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F P L +A +N++ I I HTDS GT N+ +S++RA + + + ++
Sbjct: 121 FKPTLDKLAATMNEYNQNTITIAGHTDSKGTDAYNMKLSRDRAYAVAN-YLSARGVASNR 179
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
I+V + P+ N+++ GRQ N+R+E+ + +++
Sbjct: 180 INVVAYGESRPVADNNSEYGRQQNRRVELTVNAPQSVR 217
>gi|294638308|ref|ZP_06716561.1| OmpA family protein [Edwardsiella tarda ATCC 23685]
gi|291088561|gb|EFE21122.1| OmpA family protein [Edwardsiella tarda ATCC 23685]
Length = 219
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ K L + + G +D E + + +++ TG+ V+R GD I +P
Sbjct: 53 SSSKSDRGKGALIGAAAGAALGGGIGYYMDVQEAKLRDKMRGTGVSVTRQGDNIVLNMPN 112
Query: 79 HVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+V+F S L+ L +A +L ++ T + + +TDS G+ N+ +SQ+RAD +
Sbjct: 113 NVTFDSNSSNLKPAGANTLTGVAMVLKEYQKTAVNVVGYTDSTGSRDLNMRLSQQRADSV 172
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S LI +GV++ R I G PI +N T G+ N+R+EI + P
Sbjct: 173 ASALITQGVAAGR-IRTIGMGPANPIASNSTAAGKAQNRRVEITLSP 218
>gi|83644388|ref|YP_432823.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83632431|gb|ABC28398.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 219
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 54/166 (32%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ +++ K L + V G +DK E E + +L+ TG+ V R GD IT +P +
Sbjct: 52 SSKKDRGKGALIGAAAGGAVGGGIGYYMDKQESELRHRLEGTGVRVVRNGDEITLVMPGN 111
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++F ++ F L + +L +F T+I + HTDS G+L N +S++RA +
Sbjct: 112 ITFDTGRAEVKANFYDTLDSVGLVLKEFDKTIIQVSGHTDSTGSLDLNQRLSEQRAGSVG 171
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
YLI +GV S+R ++ G+ +YP+ TN T GR N+R+E+++ P
Sbjct: 172 RYLISQGVLSSRVQTI-GYGPRYPVATNSTTEGRAANRRVELKLVP 216
>gi|3493603|gb|AAC33455.1| outer membrane protein homolog [Vitreoscilla sp. C1]
Length = 217
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 29/211 (13%)
Query: 2 IKELGLSMFIMTTISGCGLAS---------------------------REKKKVFLHKSN 34
K ++ +S C K + +
Sbjct: 5 KKFSLMATVAAVALSACATDPMTGQVDRNNTVLGALGGAATCGIVGALTHGSKGARNSAL 64
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFL 93
+ G+ +D E + + L +T + V+R+GD I +P ++F L
Sbjct: 65 ACGAIGAGVGAYMDHQERQLRQSLANTQVEVNRVGDEIRLVMPESITFATGSYQLNSSAS 124
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L ++++L ++ T I I HTDS G+ N +S+ RA + +YL+ R V+SNR I+
Sbjct: 125 TSLNSVSSVLAQYTDTTINIVGHTDSTGSDAINEPLSRNRASAVANYLVSRNVASNR-IT 183
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G + P+ +N+T GR N+R+EI + P
Sbjct: 184 TVGAGCRQPVASNNTVAGRAENRRVEITVNP 214
>gi|238918002|ref|YP_002931516.1| outer membrane lipoprotein [Edwardsiella ictaluri 93-146]
gi|238867570|gb|ACR67281.1| inner membrane lipoprotein YiaD [Edwardsiella ictaluri 93-146]
Length = 219
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ K L + + G +D E + + +++ TG+ V+R GD I +P
Sbjct: 53 SSSKSDRGKGALIGAAAGAALGGGIGYYMDVQEAKLRDKMRGTGVSVTRQGDNIVLNMPN 112
Query: 79 HVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+V+F S L+ L +A +L ++ T + + +TDS G+ N+ +SQ+RAD +
Sbjct: 113 NVTFDSNSSNLKPAGANTLTGVAMVLKEYQKTAVNVVGYTDSTGSRDLNMRLSQQRADSV 172
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S LI +GVS+ R I G PI TN T G+ N+R+EI + P
Sbjct: 173 ASALIVQGVSAGR-IRTIGMGPANPIATNSTAAGKAQNRRVEITLSP 218
>gi|114569157|ref|YP_755837.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
gi|114339619|gb|ABI64899.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
Length = 227
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLA----------------------------------SREKK 26
M++ L++ T++ C S E +
Sbjct: 7 MLRTTVLTVA-ALTMAACTTTDPYTGETRANNTGRGVLLGAAAGAALGYLTNTNDSEEGR 65
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSE 85
L + + G+ +D+ E + L DTG+ V R G+ + +P V+F +
Sbjct: 66 TNALIGAGIGALAGGAIGNYMDRQETAMREALSDTGVGVRREGNDLRLIMPGDVTFATNS 125
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
++ +F +L ++T+LN++P+T + + H DS+G N +S+ RA + +YLI +G
Sbjct: 126 ADIQGQFYGILSDVSTVLNRYPATYVDVVGHADSVGAADYNQQLSERRALSVGNYLIAQG 185
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
V +R + G + PI +N+T GRQ N+R+EI I P +
Sbjct: 186 VLRDR-FYIAGMGERSPIASNETAAGRQQNRRVEILIRPHAS 226
>gi|269137375|ref|YP_003294075.1| putative outer membrane lipoprotein [Edwardsiella tarda EIB202]
gi|267983035|gb|ACY82864.1| putative outer membrane lipoprotein [Edwardsiella tarda EIB202]
gi|304557476|gb|ADM40140.1| Outer membrane protein [Edwardsiella tarda FL6-60]
Length = 219
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ K L + + G +D E + + +++ TG+ V+R GD I +P
Sbjct: 53 SSSKSDRGKGALIGAAAGAALGGGIGYYMDVQEAKLRDKMRGTGVSVTRQGDNIVLNMPN 112
Query: 79 HVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+V+F S L+ L +A +L ++ T + + +TDS G+ N+ +SQ+RAD +
Sbjct: 113 NVTFDSNSSNLKPAGANTLTGVAMVLKEYQKTAVNVVGYTDSTGSRDLNMRLSQQRADSV 172
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S LI +GVS+ R I G PI TN T G+ N+R+EI + P
Sbjct: 173 ASALIVQGVSAGR-IRTIGMGPANPIATNSTAAGKAQNRRVEITLSP 218
>gi|300779346|ref|ZP_07089204.1| proteobacterial sortase system OmpA family protein
[Chryseobacterium gleum ATCC 35910]
gi|300504856|gb|EFK35996.1| proteobacterial sortase system OmpA family protein
[Chryseobacterium gleum ATCC 35910]
Length = 229
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 9/192 (4%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSN----DTDIVNKRFGSSLDKAEDEFQMQL 58
+ + + + G + K + + G+ +DK + + L
Sbjct: 33 RGTAVGVASGAVLGGILGNNVGKGGNGAIGAVLGGIIGGVAGNVIGNKMDKQARDIKETL 92
Query: 59 QDTGIVVSRIGDMITCYIPVHV--SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G V R+GD I + + L L +A +L P T I I H
Sbjct: 93 P--GAQVERVGDGIKVTMNESIVNFAFDSSNLTSVAQTNLDKLAEVLANNPDTNINIYGH 150
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS G+ NL +SQ RAD +K+YL +G++S+R + +G P+ +NDT+ GR N+
Sbjct: 151 TDSKGSDDYNLKLSQRRADAVKAYLTGKGIASSRMFT-KGEGEAMPVASNDTEEGRAKNR 209
Query: 177 RIEIQIFPRGNI 188
R+E I +
Sbjct: 210 RVEFAITANEKM 221
>gi|153841945|ref|ZP_01993455.1| inner membrane lipoprotein YiaD [Vibrio parahaemolyticus AQ3810]
gi|149745429|gb|EDM56680.1| inner membrane lipoprotein YiaD [Vibrio parahaemolyticus AQ3810]
Length = 170
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 3/168 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIP 77
G ++E++K L + G D+ E E + L ++G+ V R+G + + +
Sbjct: 2 GDNAKERRKHALIGAAAGGATGAGVGYYFDQQEAELRRALLNSGVQVQRVGENQLLLRME 61
Query: 78 VHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ F S + L+ L+ +A IL ++P T + I +TDS G+ N +S+ RA+
Sbjct: 62 NGIGFSSSSYQLDASIHNTLRGVARILVEYPDTSLVIDGYTDSTGSESYNQTLSERRAES 121
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++ +L+ + V+ R I RG+ + PI +N T GR N+R+EIQI P
Sbjct: 122 VRQFLVSQKVAPGRAI-ARGYGERNPICSNQTSEGRACNRRVEIQILP 168
>gi|262280028|ref|ZP_06057813.1| OmpA/MotB domain-containing protein [Acinetobacter calcoaceticus
RUH2202]
gi|262260379|gb|EEY79112.1| OmpA/MotB domain-containing protein [Acinetobacter calcoaceticus
RUH2202]
Length = 217
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 3/180 (1%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
++ G ++ + ++ G LD+ E + + Q+ TG+ V R
Sbjct: 38 TLIGAAAGYGISKSNANSSGQNNRAAAIGAVLGAAGGVYLDQKEKKLRQQMAGTGVDVGR 97
Query: 68 IGDM-ITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
D + +P ++F + + ++ F L +A L + + I + +TD+ G
Sbjct: 98 NPDGSVQLIMPGSITFDTNKSNIKPNFYSTLDKVAQTLAEDNKSAILVTGYTDNTGNDSI 157
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N+ +SQ RA +K+YL + S+ I +G+ PI N T GR+ N+R+EI I+ +
Sbjct: 158 NIPLSQSRAQSVKNYLAGK-GLSSSRIDAQGYGSSNPIADNSTASGREQNRRVEISIYAK 216
>gi|157963436|ref|YP_001503470.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157848436|gb|ABV88935.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 224
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ K L + + G +D E E + QLQ +G+ V+R GD I +P
Sbjct: 55 SSSKSDRAKGALIGAASGAALGGGIGYYMDVQEAELRKQLQSSGVSVTRSGDNIILNMPN 114
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V+F V + L ++ +L + + ++ T + + HTDS G NL +SQ RA +
Sbjct: 115 DVTFGVDQTDLSQRAKQVLNSVVLVALEYDETKLNVMGHTDSSGAESYNLRLSQVRASEV 174
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+YL ++ V + R ++ G PI +N+TK GR N+R+EI + P
Sbjct: 175 ANYLTRQKVPAQR-VASHGMGESKPIASNETKQGRAENRRVEIILSP 220
>gi|260552490|ref|ZP_05825866.1| inner membrane lipoprotein yiaD [Acinetobacter sp. RUH2624]
gi|260405297|gb|EEW98793.1| inner membrane lipoprotein yiaD [Acinetobacter sp. RUH2624]
Length = 217
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 3/171 (1%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCY 75
G +S + + ++ G LD+ E + + Q+ TG+ V R D +
Sbjct: 47 GISKSSANSSRQNNRAAAIGAVLGAAGGLYLDQKEKKLREQMAGTGVEVGRNPDGSVQLI 106
Query: 76 IPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+P ++F + + ++ F L +A L + + I + +TD+ G N+ +SQ RA
Sbjct: 107 MPGSITFDTNKSNIKPNFYATLDKVAQTLAEDNKSAILVTGYTDNTGNDSINIPLSQARA 166
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + S+ I +G+ PI N T GR+ N+R+EI I+ +
Sbjct: 167 QSV-KIYLAGKGVSSSRIDAQGYGSSNPIADNSTASGREQNRRVEISIYAK 216
>gi|153834734|ref|ZP_01987401.1| inner membrane lipoprotein YiaD [Vibrio harveyi HY01]
gi|148868823|gb|EDL67889.1| inner membrane lipoprotein YiaD [Vibrio harveyi HY01]
Length = 222
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG----------------- 44
+K++ +++ ++ ++GC R+ +++N T
Sbjct: 1 MKKMSIALALVLALTGCQATQRQNATTGEYETNSTTQGALIGAIAGAAIGLAVGDNAKER 60
Query: 45 -------------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVS 84
D+ E E + L ++G+ V R+G + + + + F S
Sbjct: 61 RKGALIGAAAGGATGAGVGYYFDQQEAELRRALLNSGVQVERVGENQLLLRMENGIGFSS 120
Query: 85 EVFLEKKF-LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L+ +A IL ++P T + I +TDS G+ N +S+ RA+ ++ YL+
Sbjct: 121 SSYQLDSSIHNTLRGVARILVEYPDTSLVIDGYTDSTGSDSYNQTLSERRAESVRQYLVS 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ V+ R I RG+ + PI +N T GR N+R+EIQI P
Sbjct: 181 QNVAPGRAI-ARGYGERNPICSNQTSEGRACNRRVEIQILP 220
>gi|296113807|ref|YP_003627745.1| OmpA/MotB domain protein [Moraxella catarrhalis RH4]
gi|295921501|gb|ADG61852.1| OmpA/MotB domain protein [Moraxella catarrhalis RH4]
Length = 224
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 5/181 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
+ + G ++ + + V G+ +++ + + Q+Q TG+ V+
Sbjct: 44 AVAGALGGTAISKATGGEKTGRDAILGAAVGAAAGAYMERQAKQIEQQMQGTGVTVTHDT 103
Query: 70 D--MITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
D I +P +++F + L FL L +A +N++ T I I HTDS G N
Sbjct: 104 DTGNINLTMPGNITFAHDDDTLNSAFLGRLNQLANTMNQYHETTIVIVGHTDSTGQAAYN 163
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-PR 185
+S+ RAD ++ YLI +GV R +V G+ + PI +N T+ GR N+R+E+ I P+
Sbjct: 164 QELSERRADSVRYYLINQGVDPYRIQTV-GYGIRQPIASNATEAGRAQNRRVELMILAPQ 222
Query: 186 G 186
G
Sbjct: 223 G 223
>gi|149203135|ref|ZP_01880106.1| OmpA/MotB [Roseovarius sp. TM1035]
gi|149143681|gb|EDM31717.1| OmpA/MotB [Roseovarius sp. TM1035]
Length = 210
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 4/181 (2%)
Query: 8 SMFIMTTISGC-GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
++ +G + S K K L + G++LD+ E E + QL + +
Sbjct: 32 AIIGGLIGAGTGAIVSDSKGKGALLGGVLGAVGGAAIGNALDRQEAELRQQLDGD-VRIV 90
Query: 67 RIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + +P + F + L ++ L +P+T + + HTDS G
Sbjct: 91 NTGDRLILTMPQDILFPVDGATVAPALRDDLFKVSQSLQAYPNTTVQVVGHTDSDGDAGY 150
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S RA+ + L GV R + G P+ +N T G+ N+R+EI I P
Sbjct: 151 NQGLSLRRANAVADVLASGGVPYAR-LRAIGRGEDQPVASNLTSEGKAQNRRVEIVILPN 209
Query: 186 G 186
Sbjct: 210 A 210
>gi|167625617|ref|YP_001675911.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167355639|gb|ABZ78252.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 224
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ K L + + G +D E E + LQ +G+ V+R GD I +P
Sbjct: 55 SSSKNDRGKGALIGAASGAALGGGIGYYMDVQEAELRKLLQSSGVSVTRSGDNIILNMPN 114
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V+F V + L ++ +L + + ++ T + + +TDS G NL +SQ RA +
Sbjct: 115 DVTFGVDQTDLSQRAQQVLNSVVLVALEYDETKLNVMGYTDSSGAESYNLRLSQVRASEV 174
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ + + ++ G PI +N TK GR N+R+EI + P
Sbjct: 175 AN-YLTNHKVPAQRVASHGMGESKPIASNQTKQGRAENRRVEIILSP 220
>gi|326564485|gb|EGE14711.1| OmpA/MotB domain protein [Moraxella catarrhalis 46P47B1]
gi|326568376|gb|EGE18456.1| OmpA/MotB domain protein [Moraxella catarrhalis BC7]
gi|326572277|gb|EGE22272.1| OmpA/MotB domain protein [Moraxella catarrhalis BC8]
gi|326574291|gb|EGE24238.1| OmpA/MotB domain protein [Moraxella catarrhalis O35E]
gi|326574875|gb|EGE24805.1| OmpA/MotB domain protein [Moraxella catarrhalis 101P30B1]
Length = 224
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 5/181 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
+ + G ++ + + V G+ +++ + + Q+Q TG+ V+
Sbjct: 44 AVAGALGGTAISKATGGEKTGRDAILGAAVGAAAGAYMERQAKQIEQQMQGTGVTVTHDT 103
Query: 70 D--MITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
D I +P +++F + L FL L +A +N++ T I I HTDS G N
Sbjct: 104 DTGNINLTMPGNITFAHDDDTLNSAFLGRLNQLANTMNQYHETTIVIVGHTDSTGQAAYN 163
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-PR 185
+S+ RAD ++ YLI +GV R +V G+ + PI +N T+ GR N+R+E+ I P+
Sbjct: 164 QELSERRADSVRYYLINQGVDPYRIQTV-GYGIRQPIASNATEAGRAQNRRVELMILAPQ 222
Query: 186 G 186
G
Sbjct: 223 G 223
>gi|313144174|ref|ZP_07806367.1| OmpA family protein [Helicobacter cinaedi CCUG 18818]
gi|313129205|gb|EFR46822.1| OmpA family protein [Helicobacter cinaedi CCUG 18818]
Length = 156
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQ 97
G +D + + + +LQ TG+ VSR GD I +P ++F L F +L
Sbjct: 2 AGGAVGGYMDYQDKQLRKELQGTGVSVSREGDGIILNMPGDITFKSGSDDLSSDFYKVLN 61
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+LNK+ T++ + TD+ G+ K NL +S++RA+ + +YL + V + RF+ V G
Sbjct: 62 K--KVLNKYDKTIVTVVGFTDNTGSDKTNLALSKKRAESVAAYLQNQKVKTERFV-VDGL 118
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIF 183
PI +N T GR N+R+EI +
Sbjct: 119 GESEPIASNKTAEGRAKNRRVEISLT 144
>gi|104780138|ref|YP_606636.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
gi|95109125|emb|CAK13822.1| putative outer membrane protein, OmpA family [Pseudomonas
entomophila L48]
Length = 239
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 88/221 (39%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSND-------------------------- 35
++ L + +SGC + + +S
Sbjct: 4 MRRLIIVATAAALMSGCASPNPYDNQGQSQESTGMSKTAKYGGLGALAGAIAGAAIDHNN 63
Query: 36 -----------TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-V 83
+G DK E E + ++ +TG+ V R GD I +P +++F
Sbjct: 64 RGKGALIGAAAVGAAAAGYGYYADKQEAELRAKMANTGVEVQRQGDQIKLIMPGNITFAT 123
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ F L +A +F I + TDS G+ ++N+ +SQ RA + +YL
Sbjct: 124 DSANISPSFYSPLNNLANSFKQFNQNTIEVVGFTDSTGSRQHNMDLSQRRAQAVSTYLTS 183
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV ++R ++VRG PI +N GR N+R+E+ + P
Sbjct: 184 QGVDASR-VTVRGMGPDQPIASNADANGRAQNRRVEVNLKP 223
>gi|188036026|pdb|2K1S|A Chain A, Solution Nmr Structure Of The Folded C-Terminal Fragment
Of Yiad From Escherichia Coli. Northeast Structural
Genomics Consortium Target Er553
Length = 149
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATIL 103
+D E + + +++ TG+ V+R GD I +P +V+F S L+ L +A +L
Sbjct: 1 YYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVL 60
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
++P T + + +TDS G N+ +SQ+RAD + S LI +GV ++R I +G PI
Sbjct: 61 KEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASR-IRTQGLGPANPI 119
Query: 164 DTNDTKVGRQNNQRIEIQIFP 184
+N T G+ N+R+EI + P
Sbjct: 120 ASNSTAEGKAQNRRVEITLSP 140
>gi|255264641|ref|ZP_05343983.1| inner membrane lipoprotein YiaD [Thalassiobium sp. R2A62]
gi|255106976|gb|EET49650.1| inner membrane lipoprotein YiaD [Thalassiobium sp. R2A62]
Length = 223
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 79/216 (36%), Gaps = 34/216 (15%)
Query: 1 MIKELGLSMFIMTTISGCGL------ASREKKKVFLHKSNDTDIVN-------------- 40
M L++ + ++ C +R ++ L + V
Sbjct: 9 MKTPAALALTGVLALTACETIQDPNNPNRNTQQGALIGAATGIAVGILAGDDPEERRRGA 68
Query: 41 -----------KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFL 88
G LD+ E + L + ++ G + +P + F L
Sbjct: 69 LLGAVVGGGGGALIGQRLDQQEVALRQSL-GGNVGITNTGSELIVSLPQDILFATDSSTL 127
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
L +A LN++P+T + + HTD++G N +S RA + + ++ S
Sbjct: 128 TGGLQSDLNALANNLNQYPNTTVNVIGHTDNVGDAGYNDGLSTRRATAVAN-VLLNAGVS 186
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I+ G PI TN T GR N+R+EI I P
Sbjct: 187 SGRINAFGRGEAQPIATNLTDEGRAQNRRVEIVITP 222
>gi|260428759|ref|ZP_05782736.1| inner membrane lipoprotein YiaD [Citreicella sp. SE45]
gi|260419382|gb|EEX12635.1| inner membrane lipoprotein YiaD [Citreicella sp. SE45]
Length = 221
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 54/222 (24%), Positives = 86/222 (38%), Gaps = 39/222 (17%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASR---------------------------------E 24
MI+ + +S+ ++ CG +
Sbjct: 1 MIRARTSIFVSLAAAMALTACGEGQTFGEGNPNRNTNSGVLLGALGGAAAGRIIGGNNDD 60
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV- 83
K L + I G+ LDK E E + QL + ++ GD + +P + F
Sbjct: 61 STKNALAGAAVGAIAGGLIGNQLDKQEAELRQQL-GNNVSINNTGDRLVVTMPQDILFPF 119
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L ++ + L ++P+T + + HTDS G N +S RA + S LI
Sbjct: 120 DSAALRSDLQADIRTVGRSLLQYPNTTVQVLGHTDSDGDAAYNQKLSLRRAQAVSSVLIA 179
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
GV S+R S+ G PI +N T G+Q N+R+EI I P
Sbjct: 180 EGVPSSRIQSI-GRGEDQPIASNLTAEGKQQNRRVEIVILPN 220
>gi|163749262|ref|ZP_02156511.1| OmpA family protein [Shewanella benthica KT99]
gi|161330981|gb|EDQ01907.1| OmpA family protein [Shewanella benthica KT99]
Length = 220
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ K L + + G +D E E + QLQ TG+ V+R GD I +P
Sbjct: 53 SSSKSDRGKGALIGAASGAALGGGIGYYMDVQEAELRKQLQSTGVSVTRSGDNIVLNMPN 112
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V+F V EV L +L +A + ++ T + I +TDS G+ NL +S+ RA +
Sbjct: 113 EVTFGVDEVHLNPGAKKVLNSVALVAKEYDQTQLNILGYTDSSGSESYNLRLSKIRAIEV 172
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+YL+ + V R S G PI +N T GR N+R+EI + P
Sbjct: 173 GNYLVGQNVEYARVKS-EGIGEARPISSNTTAAGRAQNRRVEIILSP 218
>gi|260574860|ref|ZP_05842862.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259022865|gb|EEW26159.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 218
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 3/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
++ ++ G R + L + +V G++LD+ + + Q+ ++ + V
Sbjct: 38 AVAGALIGGTLGATQHGRNRFGNALLGATLGGLVGGAIGNTLDQQAADLRSQMSNSTM-V 96
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ G+ + +P + F L L+ ++ L +P + I + HTD G+
Sbjct: 97 TNTGNSLVVTMPQDILFALDSANLRPDLQADLRAVSNNLLDYPDSTIEVVGHTDDSGSAA 156
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +S+ RA + + L GV R IS G PI +N T GR N+R+EI I P
Sbjct: 157 YNQDLSERRARAVAAVLRNGGVPGGR-ISAYGRGEDQPIASNQTVNGRAQNRRVEIIIHP 215
>gi|85858041|ref|YP_460243.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB]
gi|85721132|gb|ABC76075.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB]
Length = 223
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 93/221 (42%), Gaps = 35/221 (15%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKV------FLHKSNDTDIVNKRFGSS--------- 46
+K + + + ++GC + K + ++ + G S
Sbjct: 3 MKRIS-VLLCLLFLAGCAAPQTQTKTTKGGLYGAAGGAAAGALIGQVIGRSTSGTLIGAA 61
Query: 47 ----------------LDKAEDEFQMQLQ-DTGIVVSRIGDMITCYIPVHVSFV-SEVFL 88
+D E + + L VSR G+++ V+F + +
Sbjct: 62 IGAAVGGAGGAAVGKMMDNQERDMRNVLATSDAAAVSREGNLLAVTFKGDVTFDTNSAEV 121
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ +A ++ ++P T+I ++ HTDS+G+ N+ +S RA+ + L+ + +
Sbjct: 122 RPGLYSEINRVAGVMTQYPETLIRVEGHTDSVGSDAYNMDLSTRRANAV-KTLLVQRGVA 180
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ I V G+ PI TNDT+ GRQ N+R+EI+I P+ +
Sbjct: 181 DSRIEVVGYGETMPIATNDTEAGRQKNRRVEIKIAPQTQAQ 221
>gi|212633550|ref|YP_002310075.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212555034|gb|ACJ27488.1| OmpA [Shewanella piezotolerans WP3]
Length = 222
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ K L + + G +D E E + QLQ +G+ V+R GD I +P
Sbjct: 55 SSSKSDRGKGALIGAASGAALGGGIGYYMDVQEAELRKQLQSSGVSVTRSGDTIILNMPN 114
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V+F V + L ++ +L +A + ++ T + + HTDS G N+ +SQ RA +
Sbjct: 115 DVTFGVDQTDLSQRAKQVLNSVALVALEYDETKLNVMGHTDSSGAASYNMRLSQVRASEV 174
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
SYL+ R V S R +S G P+ +N+TK GR N+R+EI + P
Sbjct: 175 ASYLMSRKVPSARVVS-HGVGEDRPVASNETKAGRAENRRVEIILSP 220
>gi|261380477|ref|ZP_05985050.1| OmpA family protein [Neisseria subflava NJ9703]
gi|284796724|gb|EFC52071.1| OmpA family protein [Neisseria subflava NJ9703]
Length = 226
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + G A K + + V G +D E + + L +T I
Sbjct: 34 KTAMYGLGGAAVCGIVGALTHGGKGARNSALACGAVGAGIGGYMDYQEKKLRQSLANTNI 93
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V R G+ I +P +V+F L L A L ++P T + I HTD+ G
Sbjct: 94 EVERQGNQIKLVMPENVTFATGSAALSGHAQSALSAAAQTLVQYPDTTLTINGHTDNTGN 153
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA+ + ++L R S+ +S G+ + PI +N T GR N+R+EI I
Sbjct: 154 DAINEPLSRNRAESVATFLQSR-GVSSTRLSTFGYGSRQPIASNATVEGRAQNRRVEILI 212
Query: 183 FP 184
P
Sbjct: 213 NP 214
>gi|77919760|ref|YP_357575.1| outer membrane protein [Pelobacter carbinolicus DSM 2380]
gi|77545843|gb|ABA89405.1| outer membrane protein [Pelobacter carbinolicus DSM 2380]
Length = 224
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD----------------------- 37
M + L + + +GC +K +
Sbjct: 1 MKRFLTVVAVLSLVAAGCSQPMTRTQKGTAIGAGAGAAVGAGLGQLIGGDTEGTLIGAGI 60
Query: 38 ------IVNKRFGSSLDKAEDEFQMQLQD-TGIVVSRIGDMITCYIPVHVSFV-SEVFLE 89
V + + ++K E + QL G + R +++ V F + ++
Sbjct: 61 GAALGGTVGGFYANYMEKQEQAMRQQLAGVEGASIQRDAEVLAVTFKSDVLFDVNSYSVK 120
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
LQ +A +LN +P T I I HTDS G+ + N+ +S++RA+ +K+ L+ GV+
Sbjct: 121 SGGYDELQRVAGVLNNYPQTSIQIAGHTDSTGSEQYNMQLSRQRAEAVKNVLVGYGVAPA 180
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
R ++V G+ PI +N + GRQ N+R+ I I P
Sbjct: 181 RLMTV-GYGESKPIASNANEAGRQINRRVAITITPNQQ 217
>gi|299771293|ref|YP_003733319.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter sp. DR1]
gi|298701381|gb|ADI91946.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter sp. DR1]
Length = 217
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 3/180 (1%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
++ G +S + + ++ G LD+ E + + Q+ TG+ V R
Sbjct: 38 TLIGAAAGYGISKSSANSSRQNNRAAAIGAVLGGASGLYLDQKEKKLRQQMAGTGVDVGR 97
Query: 68 IGDM-ITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
D + +P ++F + + ++ F L +A L + + I + +TD+ G
Sbjct: 98 NPDGSVQLIMPGSITFDTNKSNIKPNFYSTLNKVAQTLAEDNKSAILVTGYTDNTGNDSI 157
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N+ +SQ RA ++SYL +GVS++R I +GF PI N T GR+ N+R+EI I+ +
Sbjct: 158 NIPLSQARAQSVRSYLASQGVSASR-IDAQGFGSSNPIADNSTATGREQNRRVEISIYAK 216
>gi|237748606|ref|ZP_04579086.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes OXCC13]
gi|229379968|gb|EEO30059.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes OXCC13]
Length = 217
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 33/214 (15%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFL-----------------HKSNDTDIVNKR 42
M +L ++ ++GC + ++K V
Sbjct: 1 MRTKLTACALIAAIAVTGCANMTEKQKTTTTGAGIGAVAGAAIGALTGPGGWGRAAVGAA 60
Query: 43 FG------------SSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFL 88
G + ++K + E Q Q TG+ V + + I IP VSF L
Sbjct: 61 IGGLLGGGGGYLWGNHMEKQKQEMQAATQGTGVEVVQTENNMIRVSIPSDVSFATGSSTL 120
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+F +L+ +AT L PS+ I + +TD+ G+ NL +S++RA + YL+ + +
Sbjct: 121 SPQFKTILRDLATTLKNNPSSSIFVVGYTDNTGSDSVNLPLSRKRAMSVMEYLVSQ-GVA 179
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+V G K PI +N T GR N+R+EI +
Sbjct: 180 ANRFTVEGMGSKDPIASNATAEGRAQNRRVEIYV 213
>gi|87201185|ref|YP_498442.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
gi|87136866|gb|ABD27608.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
Length = 230
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDM--ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILN 104
DK E + Q TG+ V+ + I +P V+F ++ F L +A L
Sbjct: 79 DKQIRELREQTAGTGVDVTETDNGQAILVNLPNGVTFDVDSSTVKPAFATTLDRVAQSLV 138
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
++P+++I + HTDS G+ N +S+ RA + YLI RGV R I +GF PI
Sbjct: 139 QYPNSLIDVYGHTDSTGSDAYNQALSERRARAVADYLISRGVGYAR-IRSQGFGESQPIA 197
Query: 165 TNDTKVGRQNNQRIEIQIFP 184
+NDT+ GRQ N+R+EI+I P
Sbjct: 198 SNDTEQGRQANRRVEIKIVP 217
>gi|326319363|ref|YP_004237035.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323376199|gb|ADX48468.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 217
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 28/207 (13%)
Query: 3 KELGLSMFIMTTISGCGL-------------------------ASREKKKVFLHKSNDTD 37
+ L + + SGC L +
Sbjct: 5 RTLIAATAAVLLASGCANMTDTQRRTATGAGVGAAGGAVLGAVTGGNAGTGALIGAGVGA 64
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKFLPM 95
+ + +++ + E Q Q TG+VV++ D + IP +SF + ++ F P+
Sbjct: 65 LGTYIWSQHMERQKQEMQQVTQGTGVVVTQTQDNQLKLDIPSDISFATNRSDIQPNFAPV 124
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L A L P+ + I +TDS G N +S +RA ++YL RGVS R I V
Sbjct: 125 LDRFAEGLRNNPNAEVRIVGYTDSTGNDSINNPLSLDRATSTRNYLTSRGVSGAR-IQVE 183
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G + P+ TNDT GR N+R+EI +
Sbjct: 184 GRGAREPVATNDTAEGRARNRRVEIYV 210
>gi|152986735|ref|YP_001350031.1| hypothetical protein PSPA7_4687 [Pseudomonas aeruginosa PA7]
gi|150961893|gb|ABR83918.1| lipoprotein, putative [Pseudomonas aeruginosa PA7]
Length = 237
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 2/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + +G DK E E + Q++ TG+ V R GD I +P +++F
Sbjct: 62 NNRGKGALIGAAVAGAAAAGYGYYADKQEAELRRQMEGTGVEVQRQGDDIKLIMPGNITF 121
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L +A ++ I I +TDS G+ ++N+ +SQ RA + YL
Sbjct: 122 ATDSANIAPSFYAPLNNLANSFKQYNQNTIEIVGYTDSTGSRQHNMDLSQRRAQSVAGYL 181
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV R +S RG PI +N T GR N+R+E+ + P
Sbjct: 182 TAQGVDGTR-LSTRGMGPDQPIASNSTADGRAQNRRVEVNLRP 223
>gi|294139179|ref|YP_003555157.1| OmpA family protein [Shewanella violacea DSS12]
gi|6141577|dbj|BAA85891.1| unnamed protein product [Shewanella violacea]
gi|293325648|dbj|BAJ00379.1| OmpA family protein [Shewanella violacea DSS12]
Length = 220
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 37/219 (16%)
Query: 2 IKELGLSMFIM---TTISGC--------------------------------GLASREKK 26
+ +L LS+ ++ ++GC + ++
Sbjct: 1 MNKLVLSVAVLATSILVAGCQTTNPYTNEGQNAKATNGTIIGAIAGAAIGVASSSKSDRG 60
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSE 85
K L + + G +D E E + QL+ TG+ V+R GD I +P V+F V E
Sbjct: 61 KGALIGAASGAALGGGIGYYMDVQEAELRKQLRSTGVSVTRSGDNIVLNMPNEVTFGVDE 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
V L +L +A + ++ +T I I +TDS G+ NL +S+ RA + YLI +
Sbjct: 121 VHLNPGAKNVLNSVALVAKEYDNTQINILGYTDSSGSESYNLRLSKVRAVEVADYLISQK 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V R + G PI +N T GR N+R+EI + P
Sbjct: 181 VEYAR-VRSEGIGEARPIASNSTAQGRTQNRRVEIILSP 218
>gi|296390816|ref|ZP_06880291.1| hypothetical protein PaerPAb_21793 [Pseudomonas aeruginosa PAb1]
Length = 237
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 2/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + +G DK E E + Q++ TG+ V R GD I +P +++F
Sbjct: 62 NNRGKGALIGAAVAGGAAAGYGYYADKQEAELRRQMEGTGVEVQRQGDDIKLIMPGNITF 121
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L +A ++ I I +TDS G+ ++N+ +SQ RA + YL
Sbjct: 122 ATDSANIAPSFYAPLNNLANSFKQYNQNTIEIVGYTDSTGSRQHNMDLSQRRAQSVAGYL 181
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV R +S RG PI +N T GR N+R+E+ + P
Sbjct: 182 TAQGVDGTR-LSTRGMGPDQPIASNSTADGRAQNRRVEVNLRP 223
>gi|15596030|ref|NP_249524.1| hypothetical protein PA0833 [Pseudomonas aeruginosa PAO1]
gi|107100290|ref|ZP_01364208.1| hypothetical protein PaerPA_01001315 [Pseudomonas aeruginosa PACS2]
gi|116048755|ref|YP_792445.1| hypothetical protein PA14_53500 [Pseudomonas aeruginosa UCBPP-PA14]
gi|254239185|ref|ZP_04932508.1| hypothetical protein PACG_05376 [Pseudomonas aeruginosa C3719]
gi|254245120|ref|ZP_04938442.1| hypothetical protein PA2G_06007 [Pseudomonas aeruginosa 2192]
gi|313105709|ref|ZP_07791972.1| hypothetical protein PA39016_000110006 [Pseudomonas aeruginosa
39016]
gi|9946728|gb|AAG04222.1|AE004518_3 hypothetical protein PA0833 [Pseudomonas aeruginosa PAO1]
gi|115583976|gb|ABJ09991.1| hypothetical protein PA14_53500 [Pseudomonas aeruginosa UCBPP-PA14]
gi|126171116|gb|EAZ56627.1| hypothetical protein PACG_05376 [Pseudomonas aeruginosa C3719]
gi|126198498|gb|EAZ62561.1| hypothetical protein PA2G_06007 [Pseudomonas aeruginosa 2192]
gi|310878474|gb|EFQ37068.1| hypothetical protein PA39016_000110006 [Pseudomonas aeruginosa
39016]
Length = 237
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 2/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + +G DK E E + Q++ TG+ V R GD I +P +++F
Sbjct: 62 NNRGKGALIGAAVAGAAAAGYGYYADKQEAELRRQMEGTGVEVQRQGDDIKLIMPGNITF 121
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L +A ++ I I +TDS G+ ++N+ +SQ RA + YL
Sbjct: 122 ATDSANIAPSFYAPLNNLANSFKQYNQNTIEIVGYTDSTGSRQHNMDLSQRRAQSVAGYL 181
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV R +S RG PI +N T GR N+R+E+ + P
Sbjct: 182 TAQGVDGTR-LSTRGMGPDQPIASNSTADGRAQNRRVEVNLRP 223
>gi|193212466|ref|YP_001998419.1| OmpA/MotB domain-containing protein [Chlorobaculum parvum NCIB
8327]
gi|193085943|gb|ACF11219.1| OmpA/MotB domain protein [Chlorobaculum parvum NCIB 8327]
Length = 232
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 88/203 (43%), Gaps = 30/203 (14%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGS-------------------------SLD 48
+GC + + + ++ GS +D
Sbjct: 25 VTTGCQSTTNA-GRGAGIGATSGAVIGGIIGSRSGSWAQGALIGAAIGGAGGAIIGDYMD 83
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
K +E + ++ V R+G+ I + F + L ++ +A +LN++P
Sbjct: 84 KQAEEIRQEV--GNADVERVGEGIRVVFDTGLLFSTNSSTLNPNSRYNIENLARVLNRYP 141
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
T + ++ HTDSIG+ N ++S+ RA+ + S L++ ++ G+ P+ TN+
Sbjct: 142 DTNVVVEGHTDSIGSEATNQVLSERRAESVVS-LLRAYGVYGNRLTAVGYGETRPVATNE 200
Query: 168 TKVGRQNNQRIEIQIFPRGNIKK 190
T++GR+ N+R+E+ I+ +K+
Sbjct: 201 TEMGRRQNRRVEVLIYANNELKR 223
>gi|120600257|ref|YP_964831.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|146291813|ref|YP_001182237.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|120560350|gb|ABM26277.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
gi|145563503|gb|ABP74438.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
gi|319425048|gb|ADV53122.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 228
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 34/214 (15%)
Query: 6 GLSMFIMTTISGCGLA--------------------------------SREKKKVFLHKS 33
++ +SGC ++ K L +
Sbjct: 16 FAAIIGTFVVSGCSTVNPYTNEQQTAKATSGAIIGAVAGAAVGVASSSKSDRGKGALIGA 75
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKF 92
V G +D E + + QL TG+ V+R GD I +P V+F V + L
Sbjct: 76 ASGAAVGGGIGYYMDVQETKLRQQLASTGVSVTRNGDNIILNMPNEVTFGVDQTELSDGA 135
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+L +A + ++ T + + +TDS G+ NL +SQ RA + +YL+ +G++++R
Sbjct: 136 SRVLNSVALVAKEYSKTQLNVLGYTDSSGSDAYNLRLSQVRASEVANYLMSKGIAASRVK 195
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +G PI +N + GR N+R+EI + P G
Sbjct: 196 S-KGMGKASPIASNASAEGRAQNRRVEIVLTPTG 228
>gi|332828413|gb|EGK01122.1| hypothetical protein HMPREF9455_02644 [Dysgonomonas gadei ATCC
BAA-286]
Length = 224
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPML 96
G+ +DK + E Q+ + G I + F + L L
Sbjct: 67 TAGAVIGNKMDKQKKEL-EQINGAQVESINDGQAIKVTFESGILFATNSSTLNSASQSAL 125
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
AT LN P T + I HTD+ G+ N +S++RA + ++L +GVS +R +S +G
Sbjct: 126 TSFATSLNNNPDTDVQIYGHTDNTGSDAINNPLSEKRAQSVYNFLQTKGVSGSRMVS-QG 184
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
F P+ N T GR N+R+EI I P + K
Sbjct: 185 FGSTQPVADNSTVAGRSQNRRVEIYILPNEKMIK 218
>gi|325121211|gb|ADY80734.1| OmpA domain protein [Acinetobacter calcoaceticus PHEA-2]
Length = 217
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 3/180 (1%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
++ G ++ + + ++ G LD+ E + + Q+ TG+ V R
Sbjct: 38 TLIGAAAGYGISKSNANSSRQNNRAAAIGAVLGAAGGVYLDQKEKKLRQQMAGTGVDVGR 97
Query: 68 IGDM-ITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
D + +P ++F + + ++ F L +A L + + I + +TD+ G
Sbjct: 98 NPDGSVQLIMPGSITFDTNKSNIKPNFYATLNKVAQTLAEDNKSAILVTGYTDNTGNDSI 157
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N+ +SQ RA ++SYL +GVS++R I +G+ PI N T GR+ N+R+EI I+ +
Sbjct: 158 NIPLSQARAQSVRSYLASQGVSASR-IDAQGYGSSNPIADNSTASGREQNRRVEISIYAK 216
>gi|319638563|ref|ZP_07993325.1| hypothetical protein HMPREF0604_00949 [Neisseria mucosa C102]
gi|317400312|gb|EFV80971.1| hypothetical protein HMPREF0604_00949 [Neisseria mucosa C102]
Length = 226
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 2/182 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + G A K + + V G +D E + + L +T I
Sbjct: 34 KTAMYGLGGAAVCGIVGALTHGGKGARNSALACGAVGAGIGGYMDYQEKKLRQSLANTNI 93
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V R G+ I +P +V+F L + L A L ++P T + I HTD+ G
Sbjct: 94 EVERQGNQIKLVMPENVTFATGSAALSGQAQSALSAAAQTLVQYPDTTLTINGHTDNTGN 153
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA+ + ++L R S+ +S G+ + PI +N T GR N+R+EI I
Sbjct: 154 DAINEPLSRNRAESVATFLQSR-GVSSTRLSTFGYGSRQPIASNATVEGRAQNRRVEILI 212
Query: 183 FP 184
P
Sbjct: 213 NP 214
>gi|116327052|ref|YP_796772.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116332289|ref|YP_802007.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116119796|gb|ABJ77839.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116125978|gb|ABJ77249.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 458
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 3/159 (1%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ---LQDTGIVVSRIGDMITCYIPVHVSFVS 84
+ + + S ++ E++ + + + + + + R + I + + +
Sbjct: 298 ESGSEQKKSSNPPRETLSWPEEEENKTKQETMKVSGSPVEIRRTEEGIAISLNSVLFDYN 357
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L+ + L+ IA++L K+ I I HTD+ G + N +S+ERA + L
Sbjct: 358 SSQLKDEAKLELRRIASVLKKYGDREIRISGHTDNSGGDEYNRKLSRERALSVLKELRDE 417
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +S G+ PI N T GRQ N+R++I I
Sbjct: 418 QGLEEKRMSYEGYGKSKPIADNSTAQGRQKNRRVDITIV 456
>gi|49081952|gb|AAT50376.1| PA0833 [synthetic construct]
Length = 238
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 2/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + +G DK E E + Q++ TG+ V R GD I +P +++F
Sbjct: 62 NNRGKGALIGAAVAGAAAAGYGHYADKQEAELRRQMEGTGVEVQRQGDDIKLIMPGNITF 121
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L +A ++ I I +TDS G+ ++N+ +SQ RA + YL
Sbjct: 122 ATDSANIAPSFYAPLNNLANSFKQYNQNTIEIVGYTDSTGSRQHNMDLSQRRAQSVAGYL 181
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV R +S RG PI +N T GR N+R+E+ + P
Sbjct: 182 TAQGVDGTR-LSTRGMGPDQPIASNSTADGRAQNRRVEVNLRP 223
>gi|148653943|ref|YP_001281036.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148573027|gb|ABQ95086.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1]
Length = 218
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 89/218 (40%), Gaps = 31/218 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHK--------------------------S 33
M +L + ++ ++GC ++ +
Sbjct: 1 MKNKLMIGALASTLALAGCATDPATGQQSINKGVLGALGGAAAGAGISKVTGGEKIGRDA 60
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD--MITCYIPVHVSF-VSEVFLEK 90
+ G ++ E + + Q+ TG+ V+R + I +P +++F +
Sbjct: 61 AIGAALGGAVGLYMENQEKQLKQQMAGTGVEVNRNPNTGNIDLVMPGNITFAHDSTNING 120
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
F L +A+ + ++ T + + HTDS+G N +S+ RA + SYLI + S+
Sbjct: 121 SFYNTLDKLASTMVQYGDTTVNVMGHTDSVGNPSYNQGLSERRAQAVASYLI-QRGVSSN 179
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
I G+ P+ +N T+ GR N+R+EIQI ++
Sbjct: 180 RIRTMGYGQNQPVASNSTESGRLQNRRVEIQIVAPQSV 217
>gi|45656490|ref|YP_000576.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|45599725|gb|AAS69213.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 475
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 63/133 (47%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E++ Q + + + + R + I + + + L+++ L+ IA++L K+
Sbjct: 341 EEDNQAAPEGSPVEIRRTEEGIAISLNSVLFDHNSSELKQEAKLELKRIASVLKKYADRE 400
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I I HTD+ G + N +S+ERA + L + +S G+ PI N T
Sbjct: 401 IRISGHTDNSGGEEYNRKLSRERALSVLKELRDEQGLEEKRMSYEGYGKSKPIADNSTIQ 460
Query: 171 GRQNNQRIEIQIF 183
GRQ N+R++I I
Sbjct: 461 GRQKNRRVDITIV 473
>gi|329888485|ref|ZP_08267083.1| inner membrane lipoprotein yiaD [Brevundimonas diminuta ATCC 11568]
gi|328847041|gb|EGF96603.1| inner membrane lipoprotein yiaD [Brevundimonas diminuta ATCC 11568]
Length = 224
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 88/166 (53%), Gaps = 2/166 (1%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + +K L + + G +D + + +L TG+ V+R GD + +P
Sbjct: 57 SSGEQGRKNALIGAGIGALAGAGVGQYMDGQQRALEAELSGTGVGVARQGDNLVLRMPSD 116
Query: 80 VSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
V+F + L+ +FLP+L +A +LN++ +++ + HTDS G N +S+ RA +
Sbjct: 117 VTFATNQSDLDPRFLPVLDDVARVLNQYDRSMVDVVGHTDSSGGDAINQPLSERRAASVA 176
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++LI RGV R I V G + + PI +N T G+ N+R+EI I P
Sbjct: 177 AHLINRGVMRER-IYVAGMSARAPIGSNATPEGKAQNRRVEILIRP 221
>gi|257126323|ref|YP_003164437.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
gi|257050262|gb|ACV39446.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
Length = 215
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 3/167 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVS 81
+ K L + V G+ D+ E E + +L+ TG+ V R G+ I P +++
Sbjct: 50 GKDTKGTLIGTAGGAAVGAAIGNIFDRQEKELKDKLKGTGVEVRRTGEGEIKLTAPENIT 109
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F + ++ +F L +AT+L +P + I + HTD+ G N +S RA + SY
Sbjct: 110 FDLNSYVVKPQFRGTLDSVATVLKTYPDSTIIVSGHTDTSGNDAINNPLSVNRAASVASY 169
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
L + ++ ++ RG+ K PI +N T+ GR N+R+EI I
Sbjct: 170 LQSQ-GIASSRMTYRGYGSKMPIASNATEAGRAQNRRVEIAIIANQK 215
>gi|300902742|ref|ZP_07120699.1| OmpA family protein [Escherichia coli MS 84-1]
gi|300405215|gb|EFJ88753.1| OmpA family protein [Escherichia coli MS 84-1]
Length = 211
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 36/212 (16%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC ++ + +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
V ++R I +G PI +N T G+ N+R
Sbjct: 181 VDASR-IRTQGLGPANPIASNSTAEGKAQNRR 211
>gi|120613283|ref|YP_972961.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120591747|gb|ABM35187.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
Length = 217
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 28/207 (13%)
Query: 3 KELGLSMFIMTTISGCGL-------------------------ASREKKKVFLHKSNDTD 37
+ L + + SGC L +
Sbjct: 5 RTLIAATAAVLLASGCANMTDTQRRTATGAGVGAAGGAVLGAVTGGNAGTGALIGAGVGA 64
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKFLPM 95
+ + +++ + E Q Q TG+VV++ D + IP +SF + ++ F P+
Sbjct: 65 LGTYIWSQHMERQKQEMQQVTQGTGVVVTQTQDNQLKLDIPSDISFATNRSDIQPNFAPV 124
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L A L P+ + I +TDS G N +S +RA ++YL RGV+ R + V
Sbjct: 125 LDRFAEGLRNNPNAEVRIVGYTDSTGNDAINNPLSLDRATSTRNYLTARGVNGAR-VQVE 183
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G + P+ TNDT GR N+R+EI +
Sbjct: 184 GRGAREPVATNDTAEGRARNRRVEIYV 210
>gi|218893200|ref|YP_002442069.1| hypothetical protein PLES_44851 [Pseudomonas aeruginosa LESB58]
gi|218773428|emb|CAW29240.1| hypothetical protein PLES_44851 [Pseudomonas aeruginosa LESB58]
Length = 237
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 2/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + +G DK E E + Q++ TG+ V R GD I +P +++F
Sbjct: 62 NNRGKGALIGAAVAGAAAAGYGYYADKQEAELRRQMEGTGVEVQRQGDDIKLIMPGNITF 121
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L +A ++ I I +TDS G+ ++N+ +SQ RA + +
Sbjct: 122 ATDSANIAPSFYAPLNNLANSFKQYNQNTIEIVGYTDSTGSRQHNMDLSQRRAQSV-AGY 180
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +S RG PI +N T GR N+R+E+ + P
Sbjct: 181 LTALGVDGTRLSTRGMGPDQPIASNSTADGRAQNRRVEVNLRP 223
>gi|308048148|ref|YP_003911714.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307630338|gb|ADN74640.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 219
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 2/181 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ I + ++ K L + V G +D+ E + +L TG+ V
Sbjct: 39 LIGAVSGALIGAASSSKSDRGKGILIGAASGAAVGGGIGHYMDRQEAALREKLAGTGVSV 98
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
R GD I +P ++F L+ + L +A ++++F T + I HTDS G
Sbjct: 99 KRDGDHIQLVMPNSLTFDVGSDRLKMPAINALSGVAMVVSEFDETNLQITGHTDSTGGRD 158
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +S+ERA+ + S L+++ +S+ R S G PI +N ++ GR N+R+EI + P
Sbjct: 159 LNMRLSRERAEAVASELLRQSISATRM-STYGAGPDRPIASNQSEAGRAENRRVEIVLTP 217
Query: 185 R 185
R
Sbjct: 218 R 218
>gi|167031827|ref|YP_001667058.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166858315|gb|ABY96722.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 240
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSND-------------------------- 35
++ L + ++GC + + S
Sbjct: 4 MRRLIIVATAAALMTGCASQNPYDNQGQAQGSTGMSKTAKYGGLGALAGAIAGAAIDHNN 63
Query: 36 -----------TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-V 83
+G DK E E + Q+ +TG+ V R GD I +P +++F
Sbjct: 64 RGKGALIGAAAVGAAAAGYGYYADKQEAELRAQMANTGVEVQRQGDQIKLIMPGNITFAT 123
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ F L +A +F I + TDS G+ ++N+ +SQ RA + +YL
Sbjct: 124 DSANIAPSFYSPLNNLAGSFKQFNQNTIEVVGFTDSTGSRQHNMDLSQRRAQAVSTYLTS 183
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV ++R ISVRG PI +N GR N+R+E+ + P
Sbjct: 184 QGVDASR-ISVRGMGPDQPIASNADANGRAQNRRVEVNLKP 223
>gi|304321111|ref|YP_003854754.1| hypothetical protein PB2503_07784 [Parvularcula bermudensis
HTCC2503]
gi|303300013|gb|ADM09612.1| hypothetical protein PB2503_07784 [Parvularcula bermudensis
HTCC2503]
Length = 231
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 29/200 (14%)
Query: 13 TTISGCGLASREKKKVFLHKS-----------NDTDIVNKRF----------------GS 45
ISGC ++ + + I G+
Sbjct: 30 LVISGCTTDPYTGEEKVSNTARGAGLGALAGGVIGAIAGDDEAALAGAAAGAALGGGIGA 89
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILN 104
+D+ E E + +L TG+ V R+G+ I +P +++F + + +F L +A ++
Sbjct: 90 YMDRQEQELRRELASTGVRVQRVGNDIRLIMPGNITFATGQASVRPEFYATLNSVAKVIE 149
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
++ T + ++ HTDS+GT +N+ +S RA+ + +YL +GV+ R I G+ P+
Sbjct: 150 RYQQTAVLVEGHTDSVGTEDSNVQLSIARAESVGNYLAAQGVAVPR-IRAIGYGESQPVA 208
Query: 165 TNDTKVGRQNNQRIEIQIFP 184
+N T GRQ N+R+EIQ+ P
Sbjct: 209 SNGTDSGRQQNRRVEIQLSP 228
>gi|24216314|ref|NP_713795.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
gi|24197586|gb|AAN50813.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
Length = 475
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 63/133 (47%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E++ Q + + + + R + I + + + L+++ L+ IA++L K+
Sbjct: 341 EEDNQAAPESSPVEIRRTEEGIAISLNSVLFDHNSSELKQEAKLELKRIASVLKKYADRE 400
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I I HTD+ G + N +S+ERA + L + +S G+ PI N T
Sbjct: 401 IRISGHTDNSGGEEYNRKLSRERALSVLKELRDEQGLEEKRMSYEGYGKSKPIADNSTIQ 460
Query: 171 GRQNNQRIEIQIF 183
GRQ N+R++I I
Sbjct: 461 GRQKNRRVDITIV 473
>gi|85706177|ref|ZP_01037272.1| OmpA domain protein [Roseovarius sp. 217]
gi|85669341|gb|EAQ24207.1| OmpA domain protein [Roseovarius sp. 217]
Length = 219
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 3/166 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S +K K L G++LD+ E E + QL + + + GD + +P +
Sbjct: 56 SDDKGKGALIGGILGAAGGATIGNALDRQEAELRQQLDND-VQIVNTGDRLILTMPQDIL 114
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F + L +A L +P T + + HTDS G N +S+ RA+ +
Sbjct: 115 FPVDSFTVASVLRDDLLKVAQSLQAYPDTTVQVVGHTDSDGAASYNQSLSERRANAVADV 174
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
L GVS R + G P+ +N T G+ N+R+EI I P
Sbjct: 175 LASGGVSYGR-LRAFGRGEDQPVASNLTPQGKAQNRRVEIVILPNA 219
>gi|298208747|ref|YP_003716926.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
gi|83848674|gb|EAP86543.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
Length = 233
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 86/220 (39%), Gaps = 36/220 (16%)
Query: 2 IKELGLSMFIMTTISGCGLA--SREKKKVFLHKSNDTDIVNK------------------ 41
IK + GC + K+K + + I+
Sbjct: 5 IKTILAVAVASILFVGCEATKNANNKQKGGVIGATGGAILGAIIGNNVGDGNNSELGAVI 64
Query: 42 ----------RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH---VSFVSEVFL 88
G+ +DK + + ++ G V RI D I + ++ +
Sbjct: 65 GGVVGGATGVIIGNKMDKQAQKIEQEIP--GAQVERIDDGIVVTFDENSGVYFDTNKSNI 122
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
K L ++ +L ++P+T + + HTDS G+ + N+ +S++RA+ + +Y + S
Sbjct: 123 NAKSQETLDKLSNVLVEYPNTDVLVVGHTDSTGSAEYNMSLSRDRANSVTNYFTSK-GLS 181
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ + + F P TNDT GR N+R+++ I P +
Sbjct: 182 SGRFTTKWFGETKPAYTNDTAEGRAKNRRVQLAILPNEQM 221
>gi|163732619|ref|ZP_02140064.1| OmpA family domain protein [Roseobacter litoralis Och 149]
gi|161393979|gb|EDQ18303.1| OmpA family domain protein [Roseobacter litoralis Och 149]
Length = 210
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 72/167 (43%), Gaps = 2/167 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ K + + + G +LD+ E E + L + + ++ GD + +P
Sbjct: 43 SRGDGNRDKGAVIGAVVGGAIGAGIGYNLDQQEAELRRDLGNDDVQITNTGDRLIVSLPQ 102
Query: 79 HVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ F ++ + L +A L +P++ I + HTDS G N +S+ RA +
Sbjct: 103 DLLFATDSFSVRPDLQNDLYTVAGSLQNYPASTIQVIGHTDSDGDAAYNQQLSERRAGSV 162
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ ++ ++ + G P+ +N + G+ N+R+EI I P
Sbjct: 163 -AGILMNAGVTSSRLQTIGRGESQPVASNLNETGKAQNRRVEIVILP 208
>gi|146308665|ref|YP_001189130.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145576866|gb|ABP86398.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 222
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + +G D+ E E + Q+Q TG+ V R GD+I +P +++F
Sbjct: 56 DNRGKGALIGAAVGGAAGAGYGYYADRQEAELRRQMQGTGVEVQRQGDVIQLIMPGNITF 115
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L +A ++ I + HTDS G+ N+ +SQ RA + SYL
Sbjct: 116 ATDSAEIASSFYAPLNNLANSFRQYNQNSIEVVGHTDSTGSHSYNMSLSQRRAQSVASYL 175
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I +GV +R +S RG P+ +N T GR N+R+E+ + P
Sbjct: 176 IAQGVDGSR-VSTRGMGPDQPVASNATAEGRAQNRRVEVTLRP 217
>gi|145301089|ref|YP_001143930.1| outer membrane lipoprotein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853861|gb|ABO92182.1| outer membrane lipoprotein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 218
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 33/214 (15%)
Query: 3 KELGLSMFIMTTISGC-------------------------------GLASREKKKVFLH 31
K L ++ + ++GC + ++KK L
Sbjct: 4 KILVPALALTIALTGCTTNPYTGEQQTGKAAWGALAGAATGAAVGAISSSKGDRKKGILT 63
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEK 90
+ G +D E + + +LQ TG+ V+R GD + +P +V+F S L+
Sbjct: 64 GVAAGAALGGGIGYYMDVQEAKLREKLQGTGVSVTRNGDELILNMPNNVTFDSSSAQLKA 123
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L +A ++ +F T + + HTDS G+ N+ +S +RAD + + LI GV+ +R
Sbjct: 124 AGANTLSGVAMVVAEFDKTRLNVVGHTDSTGSRDLNMKLSAQRADAVAAQLIGHGVTGSR 183
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
IS +G P+ TN T G+ N+R+ I + P
Sbjct: 184 -ISTQGVGPDQPVATNSTAAGKAQNRRVTITLIP 216
>gi|78189119|ref|YP_379457.1| OmpA family protein [Chlorobium chlorochromatii CaD3]
gi|78171318|gb|ABB28414.1| OmpA family protein [Chlorobium chlorochromatii CaD3]
Length = 233
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-S 84
K L + G+ +DK + G V R+G+ I + F
Sbjct: 62 AKGALIGAVVGGASGAVLGNYMDKQAAAIDQNV--EGAQVQRVGESIRVVFDSGLLFTTG 119
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ ++ +A ILN + T + I+ HTDSIG N ++S++RA+ + + L++
Sbjct: 120 SSTISAASRSNIEQLARILNTYGDTNVVIEGHTDSIGNEATNQVLSEKRAESV-ATLLKV 178
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ +S G+ P+ TN+T+ GR N+R+E+ I+ +++
Sbjct: 179 YGVAPNRMSAVGYGETRPVATNETEAGRNLNRRVEVLIYATDALRQ 224
>gi|307825940|ref|ZP_07656155.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307733059|gb|EFO03921.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 288
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 32/218 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLAS-----------------------------REKKKVFLH 31
M K+L ++ C K
Sbjct: 1 MKKKLLTIAISSILLTACVTDPYTGQSSLGKAAMGGGLGAAVGAGAGTLFGGNDLKNAGL 60
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFLE 89
+ +V G+ +D ++E Q LQ TGI V R + + +P +V+F L
Sbjct: 61 GALAGGVVGAAVGAYMDHQQEEMQQSLQGTGIEVQRTAENTLNLTMPSNVTFAFDSATLT 120
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ L +A +LN++P + I + HTD +G+ N ++S+ RA + S + + +
Sbjct: 121 PQAQGALDSVAKVLNQYPDSTINVTGHTDDVGSDSYNQVLSERRAASVSS-YLAQHGVTP 179
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ +G K P N + R N+R+E+ I N
Sbjct: 180 SRLTQQGMGEKMPKVPNVNEANRGQNRRVELAIVANKN 217
>gi|308270955|emb|CBX27565.1| hypothetical protein N47_H23870 [uncultured Desulfobacterium sp.]
Length = 229
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 90/230 (39%), Gaps = 45/230 (19%)
Query: 2 IKELGL-SMFIMTTISGCGLASREKK-KVFLHKSNDTDIVNKRFG--------------- 44
+K+L + + + T GC ++ + + + G
Sbjct: 1 MKKLVIWASIVAFTFIGCATKTQTGTLAGTGVGAAVGAGLGQAIGGNTTGTLVGAAIGAA 60
Query: 45 ----------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-----------------P 77
+ +D+ E + L D+ +
Sbjct: 61 AGGLAGGAIGNYMDRQEAAMRQALADSEAASINREQQVLAQATADSSKKVRDVLTVTFKS 120
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ V+ L L +A ++N++P T I + HTDS G+ + N +S++RA +
Sbjct: 121 DFLYAVNSSTLFPGAYDELDRVAKVINQYPDTRIQVGGHTDSTGSAEYNQKLSEQRAQAV 180
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
K+ L+ RGV+++R IS G+ I +N+T+ GRQ N+R+EI+I P
Sbjct: 181 KNALVSRGVNASR-ISAIGYGENKSIASNETEAGRQQNRRVEIRIIPNQE 229
>gi|254506333|ref|ZP_05118476.1| outer membrane protein [Vibrio parahaemolyticus 16]
gi|219550813|gb|EED27795.1| outer membrane protein [Vibrio parahaemolyticus 16]
Length = 225
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 39/222 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG---------------- 44
++K++ L++ + +SGC R+ ++N
Sbjct: 3 IVKKITLALAVAIALSGCQATQRQNATTGESETNSATSGAIIGAIAGAAIGVATGDDAKD 62
Query: 45 --------------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFV 83
D+ E + +L ++G+ V R+G + + + + F
Sbjct: 63 RRKRALIGAAGGAAVGGGVGYYFDQQEAALRQELLNSGVQVERVGENQLLLRLENGIGFS 122
Query: 84 SEVFLEKKF-LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
S + L+ +A IL ++P T + I+ HTDS G+ N ++S+ RA+ ++SYL+
Sbjct: 123 SSSYQLDSSIHNTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQILSERRAESVRSYLV 182
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV++ R I RG +YP+ TN T GR N+R+EIQI P
Sbjct: 183 SQGVAAGRAI-ARGNGERYPLCTNSTAEGRACNRRVEIQILP 223
>gi|114764072|ref|ZP_01443311.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601]
gi|114543430|gb|EAU46445.1| OmpA domain protein [Roseovarius sp. HTCC2601]
Length = 221
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 84/219 (38%), Gaps = 36/219 (16%)
Query: 2 IKELGLSMFIMTTISGCGLAS---------------------------------REKKKV 28
+ LS+ + +S C + K
Sbjct: 5 KTSILLSLAAVMGLSACSDGQMFDENNPNRNTNQGVILGALGGAAAGRLIGGNNDDAVKN 64
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVF 87
L + I G+ LDK E E + QL + + GD + +P + F
Sbjct: 65 TLAGAAAGAIAGGVIGNQLDKQEAELRQQL-GNDVGIRNTGDRLIVTMPQDILFGFDSDT 123
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L ++ + + L ++P+T + + HTDS G N +SQ RA + + L+ GV
Sbjct: 124 LRNDLQADIRTVGSSLLQYPNTSVQVVGHTDSDGDAGYNQGLSQRRAQSVANVLVSSGVP 183
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S+R ISV G P+ +N T G+ N+R+EI I P
Sbjct: 184 SSR-ISVIGRGEAAPVASNLTPEGKAQNRRVEIVILPNA 221
>gi|237745869|ref|ZP_04576349.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377220|gb|EEO27311.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes HOxBLS]
Length = 218
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR----------------- 42
M +L ++ ++GC + +KK
Sbjct: 1 MRTKLTACALIATLAVTGCANMNDTQKKTATGAGVGAAAGAVLGAVTGPGGWGRAAAGAA 60
Query: 43 ------------FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSF-VSEVFL 88
+G+ ++K + E Q Q TG+ V + + I IP VSF + +
Sbjct: 61 LGGLIGGGAGYLWGNHMEKQKQEMQTATQGTGVEVVQTSDNQIKVSIPSDVSFATNSATI 120
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+F +L+ +AT L PST I + +TD+ G+ N +S+ERA +++YL+ + +
Sbjct: 121 SPQFKTILRDLATTLKNNPSTSITVIGYTDNTGSDAINQPLSRERAMSVRNYLVSQ-GVA 179
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+V G PI +N T GR N+R+EI + R
Sbjct: 180 ANRFTVEGRGSSDPIASNLTAAGRAENRRVEIYVGERAK 218
>gi|110678313|ref|YP_681320.1| OmpA family domain-containing protein [Roseobacter denitrificans
OCh 114]
gi|109454429|gb|ABG30634.1| OmpA family domain protein [Roseobacter denitrificans OCh 114]
Length = 221
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 85/215 (39%), Gaps = 34/215 (15%)
Query: 3 KELGLSMFIMTTISGC--------------------------------GLASREKKKVFL 30
K + L+M + +++ C + + +
Sbjct: 6 KPVALAMAGVVSLAACTDPAQLNQNPNLSKTQQGALIGAGAGALAGALSRGDGNRDRGAV 65
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLE 89
+ + G +LD+ E E + L + + ++ GD + +P + F ++ +
Sbjct: 66 IGAVVGGAIGAGIGYNLDQQEAELRRDLGNDDVQITNTGDRLIVSLPQDLLFATDSFSVR 125
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L +A L +P++ I + HTDS G N +S+ RA + L+ GV+ +
Sbjct: 126 PDLQNDLYTVAGSLQNYPASTIQVIGHTDSDGDAAYNQRLSERRAGSVAGILMDAGVTPS 185
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R ++ G P+ +N + G+ N+R+EI I P
Sbjct: 186 RLQTI-GRGESQPVASNLNEAGKAQNRRVEIIILP 219
>gi|255534904|ref|YP_003095275.1| OmpA/MotB domain protein [Flavobacteriaceae bacterium 3519-10]
gi|255341100|gb|ACU07213.1| OmpA/MotB domain protein [Flavobacteriaceae bacterium 3519-10]
Length = 230
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 9/192 (4%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSN----DTDIVNKRFGSSLDKAEDEFQMQL 58
K + I G + K + + + G ++DK E + L
Sbjct: 34 KGTAIGTAAGAVIGGVLGNNLGKGRNAPAGAVLGGIVGGVAGNVIGRNMDKQAKEIKETL 93
Query: 59 QDTGIVVSRIGDMITCYIPVHV--SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G V R+G+ I + ++ L L +A +L T I I H
Sbjct: 94 P--GAEVERVGEGIRVTMKENMVNFGFDSSELTSAAKTNLDKLAQVLKNNMDTNINIYGH 151
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS GT NL +S+ RA ++SYLI +GV+S+R ++ G K P+ +NDT GR N+
Sbjct: 152 TDSKGTDAYNLSLSERRAAAVRSYLISQGVASSRMLT-MGVGEKEPVASNDTDAGRAENR 210
Query: 177 RIEIQIFPRGNI 188
R+E I ++
Sbjct: 211 RVEFAITANEDM 222
>gi|34541639|ref|NP_906118.1| lipoprotein PG3 [Porphyromonas gingivalis W83]
gi|5081699|gb|AAD39495.1|AF145799_1 immunogenic 23 kDa lipoprotein PG3 [Porphyromonas gingivalis]
gi|34397957|gb|AAQ67017.1| lipoprotein PG3 [Porphyromonas gingivalis W83]
Length = 223
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 79/214 (36%), Gaps = 27/214 (12%)
Query: 1 MIKELGLS--MFIMTTISGCG-----------------------LASREKKKVFLHKSND 35
M K ++ + + +GCG + + +
Sbjct: 1 MKKSSVVASVLAVALVFAGCGLNNMAKGGLIGAGVGGAIGAGVGNVAGNTAVGAIVGTAV 60
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLP 94
G +DK + E + + D I G+ I + F + L
Sbjct: 61 GGAAGALIGKKMDKQKKELEAAVPDATIQTVNDGEAILVTFDSGILFATNSSTLSPNSRT 120
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L A +NK P T I I HTD+ G+ K N +S+ RA + S+L +GVS +R +
Sbjct: 121 ALTKFAANMNKNPDTDIRIVGHTDNTGSDKINDPLSERRAASVYSFLNSQGVSMSRM-AA 179
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
G P+ N T GR N+R+E+ I P +
Sbjct: 180 EGRGSHEPVADNSTVAGRSANRRVEVYILPNAKM 213
>gi|188995861|ref|YP_001930113.1| immunoreactive 23 kDa antigen [Porphyromonas gingivalis ATCC 33277]
gi|188595541|dbj|BAG34516.1| immunoreactive 23 kDa antigen [Porphyromonas gingivalis ATCC 33277]
Length = 223
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 79/214 (36%), Gaps = 27/214 (12%)
Query: 1 MIKE--LGLSMFIMTTISGCG-----------------------LASREKKKVFLHKSND 35
M K + ++ + +GCG + + +
Sbjct: 1 MKKSSVVASALAVALVFAGCGLNNMAKGGLIGAGVGGAIGAGVGNVAGNTAVGAIVGTAV 60
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLP 94
G +DK + E + + D I G+ I + F + L
Sbjct: 61 GGAAGALIGKKMDKQKKELEAAVPDATIQTVNDGEAILVTFDSGILFATNSSTLSPNSRT 120
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L A +NK P T I I HTD+ G+ K N +S+ RA + S+L +GVS +R +
Sbjct: 121 ALTKFAANMNKNPDTDIRIVGHTDNTGSDKINDPLSERRAASVYSFLNSQGVSMSRM-AA 179
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
G P+ N T GR N+R+E+ I P +
Sbjct: 180 EGRGSHEPVADNSTVAGRSANRRVEVYILPNAKM 213
>gi|221069812|ref|ZP_03545917.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
gi|220714835|gb|EED70203.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
Length = 219
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 33/218 (15%)
Query: 1 MIKELGL--SMFIMTTISGCGLASREKKKV----------------------------FL 30
M K+L + ++ I+GC L
Sbjct: 1 MRKQLAVTAALASALLITGCANTGGMSDTTRRTATGAGVGALGGAAIGAIAGGHAGKGAL 60
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHV-SFVSEVFL 88
+ + + + +L+K + E + Q TG+ V++ D + IP + +
Sbjct: 61 IGAGVGALGSYIWSQNLEKQKREMEAATQGTGVGVTQTADNQLKLDIPSDISFDTGRADI 120
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ F P+L A L P+ + I HTDS G+ N +S +RA+ ++YL RGV+
Sbjct: 121 KSNFAPILDRFAEGLRNNPNAEVRIIGHTDSTGSDAINNPLSLQRAESTRNYLTSRGVNG 180
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
R I V+G P+ +N T GR N+R+EI + R
Sbjct: 181 AR-IQVQGMGSHQPVASNATNEGRARNRRVEIFVGERA 217
>gi|254492090|ref|ZP_05105265.1| hypothetical protein MDMS009_2433 [Methylophaga thiooxidans DMS010]
gi|224462642|gb|EEF78916.1| hypothetical protein MDMS009_2433 [Methylophaga thiooxydans DMS010]
Length = 224
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 30/212 (14%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKK-----------------------VFLHKSNDTDI 38
+K+L L+ + T +SGC +K + + +
Sbjct: 1 MKKLVLATIVATALSGCAANDPNQKTKAGAAIGAAAGALVGYAVDDGAGGVIAGAAVGAL 60
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI------TCYIPVHVSFVSEVFLEKKF 92
G +D + E + L + + L+ F
Sbjct: 61 AGGGVGRYMDNQQKEMEAALAEEQARHELEIQQLENETLKIDIANEVSFDFDSAALKSAF 120
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
P L +A +L ++P+T+I + HTDS+G+ N +S+ RA + Y RGV++ R
Sbjct: 121 TPTLSKVADVLQRYPNTIIHVVGHTDSVGSESYNQRLSERRAQSVVDYFSSRGVATGRLY 180
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++ G P TN+T+ GRQ N+R+EI + P
Sbjct: 181 AI-GRGETEPRATNETEAGRQLNRRVEIFVKP 211
>gi|113868899|ref|YP_727388.1| outer membrane protein peptidoglycan-associated(lipo)proteins
[Ralstonia eutropha H16]
gi|113527675|emb|CAJ94020.1| outer membrane protein peptidoglycan-associated(lipo)proteins
[Ralstonia eutropha H16]
Length = 212
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 76/211 (36%), Gaps = 32/211 (15%)
Query: 2 IKELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSL------------- 47
IK + +S+ T ++ GC E++ + V G+ +
Sbjct: 3 IKLVTVSLTAATLLAAGCAT---EQQTHTAVGTGVGAAVGAGLGNLIGGNTTGTLVGAAV 59
Query: 48 ------------DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFV-SEVFLEKKFL 93
+ + TG ++ D + IP V+F ++ F
Sbjct: 60 GGAIGGATGYNWNAIRGKLNKDTAGTGTQITEQPDGTLKVNIPSQVTFDTDSATIKPSFR 119
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+L +A L + + HTDS G N+ +SQ RA + + + + ++
Sbjct: 120 SVLDQVAQTLGQHQDVSANVVGHTDSTGNPNYNMQLSQRRAQSV-AGYLGDRGVARNRLT 178
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G P+ N T+ GR N+R+EI + P
Sbjct: 179 AEGRGQSQPVADNGTEAGRAQNRRVEIFLKP 209
>gi|134094293|ref|YP_001099368.1| putative outer membrane protein; putative peptidoglycan-associated
(lipo)-protein [Herminiimonas arsenicoxydans]
gi|133738196|emb|CAL61241.1| conserved hypothetical protein; putative OmpA domain [Herminiimonas
arsenicoxydans]
Length = 225
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 82/211 (38%), Gaps = 31/211 (14%)
Query: 2 IKELGL-SMFIMTTISGCGLASREK---------------------------KKVFLHKS 33
++ L + S+ + +SGC S +
Sbjct: 1 MRTLMIGSLAAILALSGCANMSPTERGTAQGAGIGAGLGALIGGVGGGSKNIAGGAAVGG 60
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSF-VSEVFLEKK 91
+ + S ++ + + Q TG+ V++ + + IP +SF +
Sbjct: 61 ILGAVAGNVWSSRMENQKRAMEQATQGTGVQVTQTSDNRLKLDIPSDISFATGRSDINSS 120
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F P+L AT L P+ + I HTDS G+ N +S +RA + YL R + +
Sbjct: 121 FRPILDRFATGLVDNPAATVTIIGHTDSTGSDAINNPLSFDRASRTRDYLAGR-GVAPQR 179
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I V G + P+ +N + GR N+R+EI +
Sbjct: 180 IHVDGRGSREPVASNANEAGRARNRRVEIYV 210
>gi|84503479|ref|ZP_01001534.1| OmpA family protein [Oceanicola batsensis HTCC2597]
gi|84388157|gb|EAQ01110.1| OmpA family protein [Oceanicola batsensis HTCC2597]
Length = 226
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 3/164 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
SR+ KK L + +G LD+ E + +L + + + GD + +P +
Sbjct: 63 SRDSKKGALIGGVAGALAGAAYGDYLDRQEAALRSEL-GSNVQIVNTGDRLVVTMPQDIL 121
Query: 82 F-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F L L +A LN++P T + + HTD+ G N +S RA + +
Sbjct: 122 FATDSASLRPDLTTDLVTVARSLNEYPRTTVQVVGHTDNTGDAAYNQQLSARRASAVANV 181
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
LI GVS+ R S G P TN T GRQ N+R++I I P
Sbjct: 182 LINSGVSAGRIQS-FGRGEDQPRATNLTPEGRQLNRRVDIVILP 224
>gi|311747916|ref|ZP_07721701.1| OmpA family protein [Algoriphagus sp. PR1]
gi|126575910|gb|EAZ80220.1| OmpA family protein [Algoriphagus sp. PR1]
Length = 225
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 8/178 (4%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
I+G L S G+ +DKA +E Q L G V R+G+ I
Sbjct: 45 VIAG----KDNTATGVLIGSAIGGSAGAIIGNEMDKAAEELQRDL--EGATVERVGEGIK 98
Query: 74 CYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ F + L L ++ L K+ T I ++ HTD+ G+ NL +S++
Sbjct: 99 ITFDSGLMFDVDKATLNSNSRDNLMELSETLKKYDETNILVEGHTDATGSDDYNLDLSRK 158
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
RA ++ + + + + PI TN+T+ GRQ N+R+E+ I+ +++
Sbjct: 159 RAYSVED-YLTNLGIQKSRLEITAYGENQPIATNETEAGRQQNRRVEVAIYANKKMQR 215
>gi|93006911|ref|YP_581348.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
gi|92394589|gb|ABE75864.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
Length = 217
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 2 IKELGLSMFIM--TTISGCGLASREKKK----------------VFLHKSNDTDIVNKRF 43
++ + I ++GC ++ + K+ D +
Sbjct: 1 MRNTLMVAAIASGLALTGCVTDPNTGQQRLNKSAIGALAGAAGGATISKATGGDKTGRDA 60
Query: 44 G----------SSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF-VSEVFLEKK 91
+++ + + Q+ TG+ V + I +P ++F + L
Sbjct: 61 AIGAALGAGVGYYMERQARQLEQQMAGTGVTVKPNANGNIDLVMPGSITFSFDDATLNNS 120
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F P L +A +N++ I I HTDS GT N+ +S++RA + + + ++
Sbjct: 121 FKPTLDKLAATMNEYNQNTITIAGHTDSKGTDAYNMKLSRDRAYAVAN-YLSARGVASNR 179
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
I+V + P+ N+++ GRQ N+R+E+ + +++
Sbjct: 180 INVVAYGESRPVADNNSEFGRQQNRRVELTVNAPQSVR 217
>gi|330831642|ref|YP_004394594.1| outer membrane lipoprotein [Aeromonas veronii B565]
gi|328806778|gb|AEB51977.1| Outer membrane lipoprotein [Aeromonas veronii B565]
Length = 218
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 33/214 (15%)
Query: 3 KELGLSMFIMTTISGC-------------------------------GLASREKKKVFLH 31
K L ++ + +SGC + ++KK L
Sbjct: 4 KILVPALALTVALSGCTTNPYTGESQTSKGAWGALAGAAAGAAVGALSSSKGDRKKGILT 63
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEK 90
+ G +D E + + +LQ TG+ V+R G+ + +P +V+F S L+
Sbjct: 64 GVAAGAALGGGIGYYMDVQEAKLREKLQGTGVSVTRNGNELILNMPNNVTFDSSSSQLKA 123
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L +A ++ +F T + + HTDS G+ N+ +S++RAD + + LI +GV+ +R
Sbjct: 124 AGANTLSGVAMVVAEFDKTRLNVVGHTDSTGSRDLNMKLSRDRADAVAAQLIGQGVAGSR 183
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
IS G P+ TN T G+ N+R+ I + P
Sbjct: 184 -ISTTGVGPDQPVATNSTAAGKAQNRRVTITLTP 216
>gi|313497139|gb|ADR58505.1| OmpA/MotB domain-containing protein [Pseudomonas putida BIRD-1]
Length = 239
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSND-------------------------- 35
++ L + ++GC + + S
Sbjct: 4 MRRLIIVATAAALMTGCAGQNPYDNQGQAQGSTGMSKTAKYGGLGALAGAIAGAAIDHNN 63
Query: 36 -----------TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-V 83
+G DK E E + Q+ +TG+ V R GD I +P +++F
Sbjct: 64 RGKGALIGAAAVGAAAAGYGYYADKQEAELRAQMANTGVEVQRQGDQIKLIMPGNITFAT 123
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ F L +A +F I + TDS G+ ++N+ +SQ RA + +YL
Sbjct: 124 DSANIAPSFYSPLNNLAGSFKQFNQNTIEVVGFTDSTGSRQHNMDLSQRRAQAVSTYLTS 183
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV ++R ISVRG PI +N GR N+R+E+ + P
Sbjct: 184 QGVDASR-ISVRGMGPDQPIASNADANGRAQNRRVEVNLKP 223
>gi|325267796|ref|ZP_08134446.1| OmpA family protein [Kingella denitrificans ATCC 33394]
gi|324980677|gb|EGC16339.1| OmpA family protein [Kingella denitrificans ATCC 33394]
Length = 221
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 2 IKELGLSM-FIMTTISGCGLASREKKK--------------------------VFLHKSN 34
+K L +++ +SGC ++ +++ + +
Sbjct: 4 LKTLTIAVTASALALSGCVTNAQGQQQPSKTALFGIGGAITCGIVGALTHGRTGARNSAL 63
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFL 93
V G +D E + + QL +TG+ V R G+ I +P +++F + L +
Sbjct: 64 ACGAVGAGVGGYMDYQERKLREQLANTGVEVERKGNQIKLTMPENITFATNSAALSAQAQ 123
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L A L K+ T I + HTDS G N +S RA+ + S + + + + ++
Sbjct: 124 NALATAAETLAKYNETTITVVGHTDSTGNDAINNPLSYNRANAVSS-FLAQHGVATQRMT 182
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
V G + PI N+T+ GR N+R+EI I P
Sbjct: 183 VLGQGSRQPIADNNTEAGRAQNRRVEILINPN 214
>gi|148546044|ref|YP_001266146.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148510102|gb|ABQ76962.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 247
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSND-------------------------- 35
++ L + ++GC + + S
Sbjct: 12 MRRLIIVATAAALMTGCAGQNPYDNQGQAQGSTGMSKTAKYGGLGALAGAIAGAAIDHNN 71
Query: 36 -----------TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-V 83
+G DK E E + Q+ +TG+ V R GD I +P +++F
Sbjct: 72 RGKGALIGAAAVGAAAAGYGYYADKQEAELRAQMANTGVEVQRQGDQIKLIMPGNITFAT 131
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ F L +A +F I + TDS G+ ++N+ +SQ RA + +YL
Sbjct: 132 DSANIAPSFYSPLNNLAGSFKQFNQNTIEVVGFTDSTGSRQHNMDLSQRRAQAVSTYLTS 191
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV ++R ISVRG PI +N GR N+R+E+ + P
Sbjct: 192 QGVDASR-ISVRGMGPDQPIASNADANGRAQNRRVEVNLKP 231
>gi|170723577|ref|YP_001751265.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169761580|gb|ACA74896.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 240
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 88/222 (39%), Gaps = 40/222 (18%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDT------------------------- 36
++ L + ++GC + + +
Sbjct: 4 MRRLIIVATAAALMTGCAGQNPYDSQGQAQGGSTGMSKTAKYGGLGALAGAIAGAAIDHD 63
Query: 37 -------------DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF- 82
+G DK E E + Q+ +TG+ V R GD I +P +++F
Sbjct: 64 NRGKGALIGAAAVGAAAAGYGYYADKQEAELRAQMANTGVEVQRQGDQIKLIMPGNITFA 123
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ F L +AT +F I + TDS G+ ++N+ +SQ RA + +YL
Sbjct: 124 TDSANIAPSFYSPLNNLATSFKQFNQNTIEVVGFTDSTGSRQHNMDLSQRRAQAVSAYLT 183
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV ++R +SVRG PI +N GR N+R+E+ + P
Sbjct: 184 SQGVDASR-VSVRGMGPDQPIASNADANGRAQNRRVEVNLKP 224
>gi|254419256|ref|ZP_05032980.1| Rickettsia 17 kDa surface antigen family [Brevundimonas sp. BAL3]
gi|196185433|gb|EDX80409.1| Rickettsia 17 kDa surface antigen family [Brevundimonas sp. BAL3]
Length = 224
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ +K L + + G +D+ + + +L +G+ V+R GD + +P
Sbjct: 57 SNGEQGRKNALIGAGVGALGGAAVGQYMDRQQRAMEAELSGSGVGVARQGDNLVLRMPSD 116
Query: 80 VSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
V+F + ++ +FLP+L +A +L ++ + I + HTDS G N +S+ RA +
Sbjct: 117 VTFATNQSSIDPRFLPVLDDVARVLQEYDRSTIDVIGHTDSTGGDAINQPLSERRAASVA 176
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S L++RGV + R + V G + + P+ +N T G+ N+R+EI I P
Sbjct: 177 SELVRRGVIAER-LYVAGNSSRNPVASNATPEGKAQNRRVEILIRP 221
>gi|26987509|ref|NP_742934.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|24982176|gb|AAN66398.1|AE016267_7 OmpA family protein [Pseudomonas putida KT2440]
Length = 236
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 39/221 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSND-------------------------- 35
++ L + ++GC + + S
Sbjct: 1 MRRLIIVATAAALMTGCAGQNPYDNQGQAQGSTGMSKTAKYGGLGALAGAIAGAAIDHNN 60
Query: 36 -----------TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-V 83
+G DK E E + Q+ +TG+ V R GD I +P +++F
Sbjct: 61 RGKGALIGAAAVGAAAAGYGYYADKQEAELRAQMANTGVEVQRQGDQIKLIMPGNITFAT 120
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ F L +A +F I + TDS G+ ++N+ +SQ RA + +YL
Sbjct: 121 DSANIAPSFYSPLNNLAGSFKQFNQNTIEVVGFTDSTGSRQHNMDLSQRRAQAVSTYLTS 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+GV ++R ISVRG PI +N GR N+R+E+ + P
Sbjct: 181 QGVDASR-ISVRGMGPDQPIASNADANGRAQNRRVEVNLKP 220
>gi|293609016|ref|ZP_06691319.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829589|gb|EFF87951.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 217
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 34/217 (15%)
Query: 2 IKELGL--SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-------------- 45
++ L + + +SGC V K+ ++ G
Sbjct: 1 MRALVISTVVGAAVVLSGCQTTGNNLGGVEYDKAALGTLIGAAAGYGISKSNANSSRQNN 60
Query: 46 ---------------SLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVS-EVFL 88
LD+ E + + Q+ TG+ V R D + +P ++F + + +
Sbjct: 61 RAAAIGAVLGAGGGVYLDQKEKKLRQQMAGTGVDVGRNPDGSVQLIMPGSITFDTNKSNI 120
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ F L +A L + + I + +TD+ G N+ +SQ RA ++SYL +GVS+
Sbjct: 121 KPNFYATLNKVAQTLAEDNKSAILVTGYTDNTGNDSINIPLSQARAQSVRSYLASQGVSA 180
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+R I +G+ PI N T GR+ N+R+EI I+ +
Sbjct: 181 SR-IDAQGYGSSNPIADNSTASGREQNRRVEISIYAK 216
>gi|218259786|ref|ZP_03475375.1| hypothetical protein PRABACTJOHN_01034 [Parabacteroides johnsonii
DSM 18315]
gi|218224914|gb|EEC97564.1| hypothetical protein PRABACTJOHN_01034 [Parabacteroides johnsonii
DSM 18315]
Length = 227
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 2/148 (1%)
Query: 43 FGSSLDKAEDEFQMQL-QDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIA 100
G +DK + E + L ++T + G+ + + F + + L+ +A
Sbjct: 70 IGKKMDKQKKELEATLPEETTVETINNGEALKVTFDSGILFATNSSTVSAASKSALRDLA 129
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
LN P T I I HTD+ G + N +S++RA + YL++ S++ ++ G
Sbjct: 130 ASLNANPDTDIKIIGHTDNTGKVDYNQTLSEKRAKSVFDYLMEDQGVSSKRMTYEGKGVH 189
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
P+ N T GR N+R+EI I P +
Sbjct: 190 EPVADNSTPEGRALNRRVEILILPNSKM 217
>gi|269103827|ref|ZP_06156524.1| putative OmpA family protein [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163725|gb|EEZ42221.1| putative OmpA family protein [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 229
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 2/180 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ I + ++ K L + + G +D + + QL +GI V
Sbjct: 49 IIGALAGAAIGVASSSKHDRGKGALIGAASGAALGGGIGYYMDVQAAKLRKQLASSGITV 108
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+R G+ I +P ++F V + L ++ + L +A + ++ T + + TDS G
Sbjct: 109 TRNGNNIVLNMPNEITFGVDQTTLNQRAMNALHNVALVAKEYNKTQLNVYGFTDSTGAAS 168
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +SQ RA + +YLI++GV++NR +S +G PI TN T GR N+R++I + P
Sbjct: 169 YNQRLSQVRAAEVGNYLIRQGVAANRVVS-QGMGEASPIATNSTAAGRAENRRVQIVMSP 227
>gi|58866398|gb|AAW82963.1| Omp52 [Leptospira santarosai serovar Shermani]
Length = 456
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Query: 45 SSLDKAEDEFQMQLQ---DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
S ++ E++ + + + + R + I + + + L+ + L+ IA+
Sbjct: 313 SWPEEEENKTKPETAKSSGPPVEIRRTEEGIAISLNSVLFDHNSSQLKDEAKLELKKIAS 372
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+L K+ I I HTD+ G + N +S+ERA + L + +S G+
Sbjct: 373 VLKKYEDREIRISGHTDNSGGDEYNRKLSRERALSVLKELRDEQGLEEKRMSYEGYGKSK 432
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
PI N T GRQ N+R++I I
Sbjct: 433 PIADNSTIQGRQKNRRVDITIV 454
>gi|37680143|ref|NP_934752.1| outer membrane protein [Vibrio vulnificus YJ016]
gi|320156108|ref|YP_004188487.1| outer membrane protein [Vibrio vulnificus MO6-24/O]
gi|326423995|ref|NP_761229.2| outer membrane protein [Vibrio vulnificus CMCP6]
gi|37198889|dbj|BAC94723.1| outer membrane protein [Vibrio vulnificus YJ016]
gi|319931420|gb|ADV86284.1| outer membrane protein [Vibrio vulnificus MO6-24/O]
gi|319999372|gb|AAO10756.2| Outer membrane protein [Vibrio vulnificus CMCP6]
Length = 223
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 38/220 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN--------------------- 40
+K++ +++ I+ T+SGC R+ ++N
Sbjct: 3 LKKVSIALAILLTLSGCQATQRQNATTGESETNSATKGALIGAIAGAVAGAATGDKKDRG 62
Query: 41 --------------KRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVSE 85
G D+ E + L ++G+ V R+G + + + + F S
Sbjct: 63 KRALIGAAGGAAIGGGVGYYFDQQEKALREALLNSGVQVERVGENQLLLRLENGIGFSSS 122
Query: 86 VFLEKKF-LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ L+ +A IL ++P T + I TDS G +N ++S+ RA+ ++S+LI +
Sbjct: 123 SYALDSSIHNTLKGVAQILVEYPDTSLVIDGFTDSTGNDASNQILSERRAESVRSFLISQ 182
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V++ R + RG +YP+ TN T GR N+R+EIQI P
Sbjct: 183 NVAAGRAV-ARGNGERYPLCTNSTAEGRACNRRVEIQILP 221
>gi|30249028|ref|NP_841098.1| outer membrane protein [Nitrosomonas europaea ATCC 19718]
gi|30138645|emb|CAD84936.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718]
Length = 220
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 50/213 (23%), Positives = 81/213 (38%), Gaps = 33/213 (15%)
Query: 1 MIK-ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR----------------- 42
M K + ++ ISGC S + K +
Sbjct: 1 MYKTRVITTLVAGFIISGCADMSGTQ-KGAGTGALIGAGTGAAIGALAGGGKGAAIGAGA 59
Query: 43 -----------FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLE 89
+ +++ + + + TG+VVS+ + + IP + ++
Sbjct: 60 GAALGAGAGYLWSKKMEEQKIQMENATAGTGVVVSQTPDNQLMLNIPSDISFDTGSAQIK 119
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
F P+L AT L P T + I HTDS G+ N +S RA + YL RGV
Sbjct: 120 PDFRPILDSFATSLLNNPGTRVTIVGHTDSTGSDAVNNPLSVNRAASTREYLASRGVPFQ 179
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
R I + G P+ +N+T GR N+R+EI +
Sbjct: 180 R-IQIDGRGSYQPVASNNTAAGRAKNRRVEIYV 211
>gi|85858897|ref|YP_461099.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB]
gi|85721988|gb|ABC76931.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB]
Length = 180
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL-QDTGIVVSRIGDMITCYIP 77
G +++ + + G +D E + + L V+R G+++
Sbjct: 7 GHSTKSTLIGTAIGAAVGGLGGAGVGRMMDNQEKDMRNALGASDAAAVTREGNLLAVTFK 66
Query: 78 VHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V+F + + + +A +L ++P T I ++ +TDS G+ N+ +S+ RA+
Sbjct: 67 GDVTFDTNSAEIRPDLYFEIDRVAGVLKQYPDTFIRVEGYTDSKGSDTYNMDLSKRRANA 126
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+K+ L+ + + I V GF P+ TNDT+ GRQ N+R+EI+I + K
Sbjct: 127 VKN-LLVQRGVAENRIEVVGFGETMPVATNDTEAGRQKNRRVEIKIAQQTQAK 178
>gi|189347037|ref|YP_001943566.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
gi|189341184|gb|ACD90587.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
Length = 229
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 89/212 (41%), Gaps = 29/212 (13%)
Query: 5 LGLSMFIMTTIS-GCGLASREK------------------------KKVFLHKSNDTDIV 39
+ L + MT++S GC + K +
Sbjct: 12 VLLLIIAMTSLSWGCQSTTNAGRGAGYGAAAGGVLGGIIGSRSGSWAKGAFLGAVIGGAA 71
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQL 98
G+ +DK E + G V R+G+ I + F + ++
Sbjct: 72 GALIGNYMDKQAAEIDRDV--EGATVERMGEGIRVVFDSGILFSTGSATITATSRDNIER 129
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A I+N++ T + I+ HTD++G ++N L+S+ RA+ + + L++ +S G+
Sbjct: 130 LARIINRYDDTNVVIEGHTDTVGNEESNQLLSEHRAEAVSN-LLKAYGVYGSRLSPVGYG 188
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
P+ +N+T+ GR+ N+R+EI I+ +K+
Sbjct: 189 ESRPVASNETESGRRLNRRVEILIYANDELKR 220
>gi|187923017|ref|YP_001894659.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
gi|187714211|gb|ACD15435.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 217
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 77/205 (37%), Gaps = 24/205 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF----------------- 43
++ L + + ++GC V T
Sbjct: 5 IMTRLAVFAVAGSLLAGCASQQGTNTAVGTGVGAGTGAALGAIFGGGKGAAIGAGVGAAV 64
Query: 44 ----GSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVF-LEKKFLPMLQ 97
G + ++ + TG ++ D + IP V+F + + ++ F P+L
Sbjct: 65 GGITGYNWQAIHNKLSGATKGTGTQITEQPDGSLKLNIPSSVTFDTNSYAVKPSFAPVLD 124
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A + + P V + HTDS G N +S RA+ + + + + + +S +G
Sbjct: 125 QLAQTMQQNPELVAQVVGHTDSTGQPAYNQTLSVNRAESVT-GYLGQRGVAPQRLSAQGL 183
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
PI N+T+ GR N+R+EI +
Sbjct: 184 GQTQPIADNNTEAGRAANRRVEIYL 208
>gi|91782349|ref|YP_557555.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
LB400]
gi|296162308|ref|ZP_06845102.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|91686303|gb|ABE29503.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
gi|295887462|gb|EFG67286.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 217
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 77/205 (37%), Gaps = 24/205 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF----------------- 43
++ L + + ++GC V T
Sbjct: 5 IMTRLAVFAVAGSLLAGCATQQGTNTAVGTGVGAGTGAALGAIFGGGKGAAIGAGVGAAV 64
Query: 44 ----GSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVF-LEKKFLPMLQ 97
G + ++ + TG ++ D + IP V+F + + ++ F P+L
Sbjct: 65 GGITGYNWQAIHNKLSGATKGTGTQITEQPDGSLKLNIPSSVTFDTNSYAVKPSFAPVLD 124
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A + + P + + HTDS G N +S RA+ + + + + + +S +G
Sbjct: 125 QLAQTMQQNPELIAQVVGHTDSTGQPAYNQTLSVNRAESVT-GYLGQRGVAPQRLSAQGM 183
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
PI N+T+ GR N+R+EI +
Sbjct: 184 GQTQPIADNNTEAGRAANRRVEIYL 208
>gi|126732859|ref|ZP_01748650.1| OmpA family protein [Sagittula stellata E-37]
gi|126706635|gb|EBA05709.1| OmpA family protein [Sagittula stellata E-37]
Length = 227
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
++ E+ + L + G+ LDK E E + QL + + + GD +
Sbjct: 56 LAAGNGDVGERNRSVLAGALIGAAAGAAIGNQLDKQEAELRQQL-GSQVDIRNTGDRLIV 114
Query: 75 YIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+P + F L L +Q +A + ++P+T I HTDS G NL +SQ R
Sbjct: 115 TMPQDILFATDSATLSGGLLGDIQDVAQSVLRYPNTTTQIIGHTDSDGDAAYNLSLSQRR 174
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
A + + + + V S+R I V G PI +N T G+Q N+R+EI I P
Sbjct: 175 AQAVANVFLAQNVPSSR-IQVIGRGEDQPIASNLTPQGKQQNRRVEIVILPNA 226
>gi|154490195|ref|ZP_02030456.1| hypothetical protein PARMER_00427 [Parabacteroides merdae ATCC
43184]
gi|154089087|gb|EDN88131.1| hypothetical protein PARMER_00427 [Parabacteroides merdae ATCC
43184]
Length = 214
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 2/148 (1%)
Query: 43 FGSSLDKAEDEFQMQL-QDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIA 100
G +DK + E + L ++T + G+ + + F + + L+ +A
Sbjct: 57 IGKKMDKQKKELEATLPEETTVETINNGEALKVTFDSGILFATNSSTVSAASKSALRDLA 116
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
LN P T I I HTD+ G + N +S++RA + YL++ S++ ++ G
Sbjct: 117 ASLNANPDTDIKIIGHTDNTGKVDYNQTLSEKRAKSVFDYLMEDQGVSSKRMTYEGKGVH 176
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
P+ N T GR N+R+EI I P +
Sbjct: 177 EPVADNSTPEGRALNRRVEILILPNSKM 204
>gi|159045565|ref|YP_001534359.1| OmpA/MotB domain-containing protein [Dinoroseobacter shibae DFL 12]
gi|157913325|gb|ABV94758.1| OmpA/MotB domain protein [Dinoroseobacter shibae DFL 12]
Length = 208
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 23/203 (11%)
Query: 5 LGLSMFIMTTISGCGLASR---------------------EKKKVFLHKSNDTDIVNKRF 43
L + + +S C + E ++ L + V
Sbjct: 7 LIAACASLLALSACTVTEDNRRMATGAAIGALAGGALGATEDREKALIGAVVGAGVGAAI 66
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
G LD+ + Q +L + + + G + +P + F ++ L ++
Sbjct: 67 GDMLDRQARDLQAELGNDAVQIVNTGSELVVTMPQDILFAVDSAVVQSTLQSDLAALSRN 126
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
L +P T + + HTD+ G+ N +SQ RA + + L+Q GV S+R + G P
Sbjct: 127 LLDYPDTTVQVVGHTDNTGSAGYNQELSQRRASAVAAILLQNGVPSSRVV-AFGRGEDQP 185
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
I +N + GR N+R+EI I PR
Sbjct: 186 IASNLDEAGRAQNRRVEIIITPR 208
>gi|197117412|ref|YP_002137839.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
gi|197086772|gb|ACH38043.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
Length = 228
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 80/220 (36%), Gaps = 35/220 (15%)
Query: 1 MIKELGLSMFIMTTISGCGLAS------------------------------REKKKVFL 30
++K + + +GC + +
Sbjct: 6 IVKLIVGMSAVALLATGCATNPDGSYEFKRTGIGALGGAALGAGAGALLGGKSHRGRNAA 65
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLE 89
+V G +D+ + + + V R GD + +P + F + L+
Sbjct: 66 IGGLTGAVVGGAVGQYMDRQAVALKKSMPE--AEVVRDGDKVYVALPSGILFDLGKDALK 123
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ L A L T I I+ HTDS G+ N +S+ RA+ ++ YL+ +GV
Sbjct: 124 PEAKDALSRAAGTLKD-SQTTITIEGHTDSTGSNAVNQPLSERRANRVRDYLVSQGVPGA 182
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + G+ P ND+ R N+R++I++ P +K
Sbjct: 183 KM-AAIGYGSSRPAVPNDSDANRALNRRVQIELTPNEKLK 221
>gi|28868377|ref|NP_790996.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213967171|ref|ZP_03395320.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
gi|301381094|ref|ZP_07229512.1| ompA family protein [Pseudomonas syringae pv. tomato Max13]
gi|302062421|ref|ZP_07253962.1| ompA family protein [Pseudomonas syringae pv. tomato K40]
gi|302133214|ref|ZP_07259204.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28851615|gb|AAO54691.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213928013|gb|EEB61559.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
gi|330965011|gb|EGH65271.1| ompA family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|331018068|gb|EGH98124.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 229
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 39/220 (17%)
Query: 3 KELGLSMFIMTTISGCGLAS-------------------------------------REK 25
+ L + + +SGC ++ +
Sbjct: 5 RRLIIVATAVALLSGCATSNPYDNQGQAQSSGGMSKTAKYGGLGALAGAVAGAAIDHNNR 64
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K L + + +G DK E + + +TG+ V R GD I +P +++F
Sbjct: 65 GKGALIGAAVAGAASAGYGYYADKQEAALRASMANTGVEVQRQGDQIKLIMPGNITFATD 124
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ F L +A L +F I I +TDS G+ ++N+ +SQ+RA + +YL +
Sbjct: 125 SSAIASSFYSPLNNLANSLKQFNQNNIEIIGYTDSTGSRQHNMDLSQQRAQSVATYLTSQ 184
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+SVRG PI +N GR N+R+E+ + P
Sbjct: 185 -GVDQSHLSVRGAGPDQPIASNADANGRAQNRRVEVNLKP 223
>gi|308449675|ref|XP_003088039.1| hypothetical protein CRE_17774 [Caenorhabditis remanei]
gi|308250191|gb|EFO94143.1| hypothetical protein CRE_17774 [Caenorhabditis remanei]
Length = 216
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 2 IKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-------------- 45
++ L ++ +SGC + KS ++ G
Sbjct: 1 MRALLITTLTAGALVLSGCQTTGNNIGGMEYDKSAIGGLIGAAAGYGLSRGNANSSAQNN 60
Query: 46 ---------------SLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFV-SEVFL 88
LD E + + Q+Q TG+ V+R D + +P ++F ++ +
Sbjct: 61 RAAAIGALLGAGTGLYLDNKEKKLRQQMQGTGVEVNRNPDGSVALIMPGSITFDTNKSTI 120
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ F L +A L + +VI + +TD+ G N+ +SQ RA + +YL +GV+S
Sbjct: 121 KPNFYGTLNKVAQTLMEDNKSVILVTGYTDNTGNDSINIPLSQNRAYSVANYLKGKGVAS 180
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I +G+ + PI N T GR+ N+R+EI I
Sbjct: 181 --RIDTQGYGSQNPIADNSTAAGREQNRRVEISI 212
>gi|34763974|ref|ZP_00144866.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27886249|gb|EAA23533.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 172
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 6/177 (3%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
+ ++ C KK S + V + K E + + G+ + R G+
Sbjct: 1 MALLVTACSSTKTTKKTNVGVDSTNKYAVEDTEAN---KKPLEDIIVFNEEGVTIRREGN 57
Query: 71 MITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ +P + F + ++ K P L +A L + I I +TD IGT NL +
Sbjct: 58 NLILSMPELILFDFDKYVVKDKIKPSLSTLAKALGENKDIHIKIDGYTDFIGTEAYNLDL 117
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +RA IK +LI +G + IS+ G+ + P DTN T GR N+R+E I RG
Sbjct: 118 SVKRARAIKDFLISKGAIGSN-ISIEGYGEQNPADTNQTAAGRSRNRRVEF-IISRG 172
>gi|21674175|ref|NP_662240.1| OmpA family protein [Chlorobium tepidum TLS]
gi|21647337|gb|AAM72582.1| OmpA family protein [Chlorobium tepidum TLS]
Length = 231
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATIL 103
+DK DE + ++Q G V R+G+ I + F L ++ +A IL
Sbjct: 79 DYMDKQADEIRQEVQ--GAKVERVGEGIRVVFDTGLLFSTDSATLNANSRYNIEKLARIL 136
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
N++ T + I+ HTD+ GT +N ++S+ RA+ + + L++ S R ++ G+ P+
Sbjct: 137 NRYNDTNVVIEGHTDNTGTEASNQILSERRAESV-ATLLRTYGVSGRRLTAIGYGETRPV 195
Query: 164 DTNDTKVGRQNNQRIEIQIFPRGNIKK 190
TN+T+ GR+ N+R+E+ I+ +K+
Sbjct: 196 ATNETEAGRRLNRRVEVLIYANDALKR 222
>gi|264680876|ref|YP_003280786.1| OmpA/MotB [Comamonas testosteroni CNB-2]
gi|299531878|ref|ZP_07045278.1| OmpA/MotB [Comamonas testosteroni S44]
gi|262211392|gb|ACY35490.1| OmpA/MotB [Comamonas testosteroni CNB-2]
gi|298720053|gb|EFI61010.1| OmpA/MotB [Comamonas testosteroni S44]
Length = 219
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 33/218 (15%)
Query: 1 MIKELGL--SMFIMTTISGCGLASREKKKV----------------------------FL 30
M K++ + ++ I+GC L
Sbjct: 1 MRKQMAVTAALASALLITGCANTGGMSDTTRRTATGAGVGALGGAAIGAIAGGHAGKGAL 60
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHV-SFVSEVFL 88
+ + + + +L+K + E + Q TG+ V++ D + IP + +
Sbjct: 61 IGAGVGALGSYIWSQNLEKQKREMEAATQGTGVGVTQTADNQLKLDIPSDISFDTGRADI 120
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ F P+L A L P+ + I HTDS G+ N +S +RA+ ++YL RGV+
Sbjct: 121 KGNFAPILDRFAEGLRNNPNAEVRIIGHTDSTGSDAINNPLSLQRAESTRNYLTSRGVNG 180
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
R I V+G P+ +N T GR N+R+EI + R
Sbjct: 181 AR-IQVQGMGSHQPVASNATNEGRARNRRVEIFVGERA 217
>gi|78221563|ref|YP_383310.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Geobacter metallireducens GS-15]
gi|78192818|gb|ABB30585.1| Thrombospondin type 3 repeat:OmpA/MotB [Geobacter metallireducens
GS-15]
Length = 447
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D LDK ++ + + + + + V F + ++ +F +
Sbjct: 299 DTDGDGVPDYLDKCP----DTPKNAAVDKNGCPEKVCITLKVEFDF-DKANIKPEFRDEI 353
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ +A L ++P I+ HTDS GT+K N +S+ RA + L+ S + +S +G
Sbjct: 354 KRVADFLKEYPDATAVIEGHTDSKGTVKYNQKLSERRAKAVMKNLVDEFGISAKRLSAKG 413
Query: 157 FAYKYPIDTNDTKVGRQNNQRI 178
+ P+ N T+ GRQ N+R+
Sbjct: 414 YGETKPVADNATEEGRQKNRRV 435
>gi|119385600|ref|YP_916655.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119376195|gb|ABL70959.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
Length = 215
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 2/176 (1%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
I + G + + E + + + GS LD+ + Q L + I + G
Sbjct: 39 AIAGAVVGGLIGAGESRSNAVKGAIIGATAGAVGGSILDQQQRSLQQSLNNPNIQIVNHG 98
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
++ +P F + + L IA L ++P++ I I HTDS G+ N
Sbjct: 99 THLSVVMPESTLFATDSAAVGAQGQNDLYTIARNLTQYPNSRIQIVGHTDSTGSAAYNQD 158
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ RA + + ++ G + ++ G P+ +NDT GR N+R+EI I P
Sbjct: 159 LSERRARSV-AGILTAGGVAQSRVTTLGRGATQPVASNDTAAGRAQNRRVEILITP 213
>gi|302381881|ref|YP_003817704.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302192509|gb|ADL00081.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 224
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ ++ L + + G+ +D+ + + +L TG+ V+R GD + +P
Sbjct: 57 SDGEQGRRNALIGAGVGALGGAAVGNYMDRQQRALEAELSGTGVGVARQGDNLVLRMPSD 116
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
V+F ++ +E +F +L +A +L ++ +V+ I HTDS G N +S+ RA +
Sbjct: 117 VTFAVNQSNIEPRFDAVLSDVAGVLQEYDRSVVDIVGHTDSSGGDAINQPLSERRALSVA 176
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
LI RGV R V G + + P+ +N T GR N+R+EI I P
Sbjct: 177 DALIARGVIRERLF-VAGQSSRVPVASNATPEGRAQNRRVEILIRP 221
>gi|19703678|ref|NP_603240.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19713798|gb|AAL94539.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 172
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 6/177 (3%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
+ ++ C KK S + V + K E + + G+ + R G+
Sbjct: 1 MALLVTACSSTKTTKKTNVGVDSTNKYAVEDTEAN---KKPLEDIIVFNEEGVTIRREGN 57
Query: 71 MITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ +P + F + ++ P L +A L + I I +TD IGT NL +
Sbjct: 58 NLILSMPELILFDFDKYAVKDGIKPSLSTLAKALGENKDIHIKIDGYTDFIGTEAYNLDL 117
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +RA IK +LI +G + IS+ G+ + P DTN T GR N+R+E I RG
Sbjct: 118 SVKRARAIKDFLISKGAIGSN-ISIEGYGEQNPADTNQTAAGRSRNRRVEF-IISRG 172
>gi|262369124|ref|ZP_06062453.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262316802|gb|EEY97840.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 216
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 33/213 (15%)
Query: 2 IKELGL-SMFIMTTISGCGLASRE-----------------------------KKKVFLH 31
++ L + ++ ++GC +
Sbjct: 1 MRALAISAVVGAMVLTGCQSTGNNIGGVEYDKAALGTLIGAAAGYGISKGNANTSRQNNR 60
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVS-EVFLE 89
+ +V G LD E + + Q+ TG+ V+R D + +P +++F + + ++
Sbjct: 61 AAAIGAVVGGATGVYLDNKEKKLRQQMAGTGVEVNRNPDGSVGLIMPGNITFDTNKSNIK 120
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
F L +A L + + I + +TDS G N+ +SQ RA + SYL +GVS+
Sbjct: 121 PNFYSTLNKVAQTLTEDNKSGILVTGYTDSTGNDSINIPLSQARAQSVASYLASQGVSTT 180
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
R I+ +G PI +N T GR+ N+R+EI I
Sbjct: 181 R-INAQGQGSANPIASNATAEGREQNRRVEISI 212
>gi|330951040|gb|EGH51300.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 229
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 39/220 (17%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSND--------------------------- 35
+ L + + +SGC ++ + S
Sbjct: 5 RRLIIVAPAVAMLSGCATSNPYDNQGQAQSSGGMSKTAKYGGLGALAGAVAGAAIDHNHR 64
Query: 36 ----------TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
+ +G DK E + + +TG+ V R GD I +P +++F
Sbjct: 65 GKGALIGAAVAGAASAGYGYYADKQEAALRESMANTGVEVQRQGDQIKLIMPGNITFATD 124
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ F L +A+ L +F I I +TDS G+ ++N+ +SQ+RA + +YL +
Sbjct: 125 SSAIASSFYSPLNNLASSLKQFNQNNIEIVGYTDSTGSRQHNMDLSQQRAQSVATYLTSQ 184
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+SVRG PI +N GR N+R+E+ + P
Sbjct: 185 -GVDQSHLSVRGAGPDQPIASNADVNGRAQNRRVEVNLKP 223
>gi|330811620|ref|YP_004356082.1| lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327379728|gb|AEA71078.1| Conserved hypothetical protein, putative lipoprotein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 244
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 47/219 (21%), Positives = 84/219 (38%), Gaps = 40/219 (18%)
Query: 3 KELGLSMFIMTTISGCGLAS--------------------------------------RE 24
+ L + + +SGC +
Sbjct: 5 RRLIVVATAVALLSGCASPNPYDNQGQASTESSGMSKTVKYGGLGALAGALAGAAIGHDN 64
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-V 83
+ K L + +G D+ E + + + +TG+ V R GD I +P +++F
Sbjct: 65 RGKGALIGAAVVGASAAGYGYYADQQEKKLRASMANTGVEVQRQGDQIKLIMPGNITFAT 124
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ F L +A L +F I I +TDS G+ ++N+ +SQ RA + +YL
Sbjct: 125 DSANIASSFYQPLNNLANSLKEFNQNQIEIVGYTDSTGSRQHNMDLSQRRAQSVATYLTS 184
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ S +S RG P+ +N GR N+R+E+ +
Sbjct: 185 Q-GVSGANLSARGAGPDNPVASNADVNGRAQNRRVEVNL 222
>gi|228474126|ref|ZP_04058867.1| inner membrane lipoprotein YiaD [Capnocytophaga gingivalis ATCC
33624]
gi|228274640|gb|EEK13481.1| inner membrane lipoprotein YiaD [Capnocytophaga gingivalis ATCC
33624]
Length = 231
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 82/223 (36%), Gaps = 36/223 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKK------------------------------VFL 30
+ K + L + + + C + K +
Sbjct: 4 VFKNITLFLVAASLLVSCEAYNNSNKTQRGAVIGAAGGAILGAILGNNVGSGGNSELGAV 63
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH---VSFVSEVF 87
+ G+ +D+ + + ++ G V R+ D I ++
Sbjct: 64 IGTAVGGAAGAVIGNQMDRQAKKIEEEIP--GAEVKRVDDGIVVTFDEKSGVTFEFNKAD 121
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L + +L +A +L ++P T + + HTDS G N+ +S+ RA + ++ G+
Sbjct: 122 LTSEAKTLLTKMAGVLKEYPDTNVIVAGHTDSKGKPAYNMGLSERRAKAVTNFFTASGLK 181
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
++R + + F P N T+ GR N+R+ I I P +K+
Sbjct: 182 ASR-FTTKWFGATQPAYDNSTEEGRAKNRRVNIAIVPNEKMKE 223
>gi|70732413|ref|YP_262169.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
gi|68346712|gb|AAY94318.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 252
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 84/219 (38%), Gaps = 40/219 (18%)
Query: 3 KELGLSMFIMTTISGCGLAS--------------------------------------RE 24
+ L + + +SGC +
Sbjct: 5 RRLIVVATAVALLSGCASPNPYDNQGQADGGSSGMSKTAKYGGLGALAGALAGAAIDHNN 64
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-V 83
+ K L + +G D+ E + + + +TG+ V R GD I +P +++F
Sbjct: 65 RGKGALIGAAVVGASAAGYGYYADQQEKKLRASMANTGVEVQRQGDQIKLIMPGNITFAT 124
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ F L +A L +F I I +TDS G+ ++N+ +SQ RA + +YL
Sbjct: 125 DSANIAPSFYQPLNNLANSLREFNQNQIEIVGYTDSTGSRQHNMDLSQRRAQSVATYLTS 184
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ S +S RG PI +N GR N+R+E+ +
Sbjct: 185 Q-GVSGSNLSARGAGPDNPIASNADVNGRAQNRRVEVNL 222
>gi|312795362|ref|YP_004028284.1| OmpA family protein [Burkholderia rhizoxinica HKI 454]
gi|312167137|emb|CBW74140.1| OmpA family protein [Burkholderia rhizoxinica HKI 454]
Length = 224
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 79/220 (35%), Gaps = 34/220 (15%)
Query: 1 MIKELGL--------SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF--------- 43
M +L L ++GC V T
Sbjct: 5 MNAKLTLRLPLQWSVLAVAGALLAGCQTPQGGNAAVGTGVGAATGAGLGAIFGGGKGAAI 64
Query: 44 ------------GSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVF-LE 89
G + +++ TG VS D + IP VSF + + ++
Sbjct: 65 GAAAGAAVGGMTGYNWQAIKNKLSGATAGTGTQVSEQPDGSLKLNIPSSVSFDTNSYAIK 124
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
F P+L +A L + P V + HTDS G + N ++SQERA + + +
Sbjct: 125 PSFTPVLDQVAQTLTQHPELVAHVVGHTDSTGQPRYNQMLSQERAQSVAQ-YLALHGVAA 183
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ ++ G PI N T+ GR N+R+EI + R ++
Sbjct: 184 QRLAAEGRGQSQPIADNSTEAGRAQNRRVEIYL--RATLQ 221
>gi|294649621|ref|ZP_06727038.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194]
gi|292824498|gb|EFF83284.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194]
Length = 217
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 89/217 (41%), Gaps = 34/217 (15%)
Query: 2 IKELGLSMFIM--TTISGCGLASRE-----------------------------KKKVFL 30
++ L +S + +SGC K
Sbjct: 1 MRALMISTLVGAGLVLSGCQTTDNNIGGVEYDKAALGALIGAAAGYGVSKGNANTSKQNN 60
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVS-EVFL 88
+ ++ G LD E + + Q+Q TG+ V R D + +P ++F + + +
Sbjct: 61 RAAAIGAVLGGAGGLYLDNKEKKLRQQMQGTGVDVGRNPDGSVQLIMPGSITFDTNKSNI 120
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ F L +A +L + + I + +TD+ G N+ +SQ RA +K+YL + +
Sbjct: 121 KPNFYATLNKVAQVLGEDNQSAILVTGYTDNTGNDSINIPLSQARAQSVKNYLAGK-GIA 179
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ I +G+ PI N T GR+ N+R+EI I+ +
Sbjct: 180 SNRIDAQGYGSSNPIADNSTAAGREQNRRVEISIYAK 216
>gi|262165460|ref|ZP_06033197.1| outer membrane protein [Vibrio mimicus VM223]
gi|262025176|gb|EEY43844.1| outer membrane protein [Vibrio mimicus VM223]
Length = 193
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 94/168 (55%), Gaps = 3/168 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIP 77
G ++E++K L + V G D+ E E + L D+G+ V R+G + + +
Sbjct: 25 GDDAKERRKHALIGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRME 84
Query: 78 VHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ F S + L+ L+ +A IL +P T + I+ HTDS G+ N ++S++RA+
Sbjct: 85 NGIGFTSSSYQLDSYIHKTLRGVARILVAYPDTSLVIEGHTDSTGSDTTNQVLSEKRAES 144
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++++L+ +GV++ R I RG ++P+ +N T GR N+R+EIQI P
Sbjct: 145 VRAFLLSQGVAAGRAI-ARGNGERFPLCSNSTAEGRACNRRVEIQILP 191
>gi|224437727|ref|ZP_03658674.1| OmpA family protein [Helicobacter cinaedi CCUG 18818]
Length = 147
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 46/138 (33%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNK 105
+D + + + +LQ TG+ VSR GD I +P ++F L F +L +LNK
Sbjct: 1 MDYQDKQLRKELQGTGVSVSREGDGIILNMPGDITFKSGSDDLSSDFYKVLNK--KVLNK 58
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+ T++ + TD+ G+ K NL +S++RA+ + +YL + V + RF+ V G PI +
Sbjct: 59 YDKTIVTVVGFTDNTGSDKTNLALSKKRAESVAAYLQNQKVKTERFV-VDGLGESEPIAS 117
Query: 166 NDTKVGRQNNQRIEIQIF 183
N T GR N+R+EI +
Sbjct: 118 NKTAEGRAKNRRVEISLT 135
>gi|160896293|ref|YP_001561875.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
gi|160361877|gb|ABX33490.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
Length = 244
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 30/211 (14%)
Query: 1 MIKELGLSMFIM--TTISGCGLASREKK-------------------------KVFLHKS 33
M K + L+ ISGC S ++ + +
Sbjct: 1 MRKHIVLAAATAAALFISGCANMSDTQRRTATGAGVGAAAGAVLGAVTGGRAGTGAVIGA 60
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKK 91
+ + +++K + E + Q TG+ VS+ D + IP +SF + ++
Sbjct: 61 GVGALGTYIWSQNMEKQKREMEQATQGTGVNVSQTADNQLKLDIPSDISFDTNRSDIKGN 120
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F P+L A L P+ + I HTDS G+ N +S +RA+ ++YL RGVS R
Sbjct: 121 FAPILDRFAEGLRNNPNAEVRIIGHTDSTGSDAINNPLSLDRANSTRNYLTMRGVSGAR- 179
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I+ G P+ +ND+ GR N+R+EI +
Sbjct: 180 IATEGRGSHQPVASNDSASGRAMNRRVEIFV 210
>gi|262373228|ref|ZP_06066507.1| inner membrane lipoprotein yiaD [Acinetobacter junii SH205]
gi|262313253|gb|EEY94338.1| inner membrane lipoprotein yiaD [Acinetobacter junii SH205]
Length = 220
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
++ G + + I+ G LD E + + Q+ TG+ V R
Sbjct: 41 TLIGAAAGYGISKGNANSSSQNNRAAAIGAILGGASGLYLDNKEKKLRAQMAGTGVEVGR 100
Query: 68 IGDM-ITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
D + +P ++F + + ++ F L +A L + + I + +TD+ G
Sbjct: 101 NPDGSVQLIMPGSITFDTNKSNIKPNFYGTLNKVAQTLAEDNKSAILVTGYTDNTGNDSI 160
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N+ +SQ RA +K+YL +GVSS+R I +G PI +N T G++ N+R+EI I+ +
Sbjct: 161 NIPLSQARAQSVKNYLASQGVSSSR-IDAQGLGSSNPIASNATAAGKEQNRRVEISIYAK 219
>gi|77460924|ref|YP_350431.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77384927|gb|ABA76440.1| putative OmpA family outer membrane protein [Pseudomonas
fluorescens Pf0-1]
Length = 237
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 84/219 (38%), Gaps = 40/219 (18%)
Query: 3 KELGLSMFIMTTISGCGLAS--------------------------------------RE 24
+ L + + +SGC +
Sbjct: 5 RRLIIVATAVAVLSGCASPNPYDNQGQADSGSQGMSKTAKYGGLGALAGALAGAAIDHNN 64
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-V 83
+ K L + +G D+ E + + + +TG+ V R GD I +P +++F
Sbjct: 65 RGKGALIGAAVVGASAAGYGYYADQQEKKLRASMANTGVEVQRQGDQIKLIMPGNITFAT 124
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ F L +A L +F I I +TDS G+ ++N+ +SQ RA + +YL
Sbjct: 125 DSANIASSFYQPLNNLANSLKEFNQNQIEIVGYTDSTGSRQHNMDLSQRRAQSVATYLTS 184
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ S +S RG PI +N GR N+R+E+ +
Sbjct: 185 Q-GVSGANLSARGAGPDNPIASNGDVNGRAQNRRVEVNL 222
>gi|302189107|ref|ZP_07265780.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
Length = 229
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 39/220 (17%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSND--------------------------- 35
+ L + + +SGC ++ + S
Sbjct: 5 RRLIIVATAVAMLSGCATSNPYDNQGQAQSSGGMSKTAKYGGLGALAGAVAGAAIDHNHR 64
Query: 36 ----------TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
+ +G DK E + + +TG+ V R GD I +P +++F
Sbjct: 65 GKGALIGAAVAGAASAGYGYYADKQEAALRESMANTGVEVQRQGDQIKLIMPGNITFATD 124
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ F L +A+ L +F I I +TDS G+ ++N+ +SQ+RA + +YL +
Sbjct: 125 SSAIASSFYSPLNNLASSLKQFNQNNIEIVGYTDSTGSRQHNMDLSQQRAQSVATYLTSQ 184
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
GV + +SVRG PI +N GR N+R+E+ + P
Sbjct: 185 GVDQSH-LSVRGAGPDQPIASNADVNGRAQNRRVEVNLKP 223
>gi|237799776|ref|ZP_04588237.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022631|gb|EGI02688.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 229
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 39/220 (17%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSND--------------------------- 35
+ L + + +SGC ++ + S
Sbjct: 5 RRLIIVATAVAMLSGCATSNPYDNQGQAQSSGGMRKTAKYGGLGALAGAVAGAAIDHNHR 64
Query: 36 ----------TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
+ +G DK E + + +TG+ V R GD I +P +++F
Sbjct: 65 GKGALIGAAVAGAASAGYGYYADKQEAALRESMANTGVEVQRQGDQIKLIMPGNITFATD 124
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ F L +A+ L +F I I +TDS G+ ++N+ +SQ+RA + +YL +
Sbjct: 125 SSAIASSFYSPLNNLASSLKQFNQNNIEIVGYTDSTGSRQHNMDLSQQRAQSVATYLTSQ 184
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+SVRG PI +N GR N+R+E+ + P
Sbjct: 185 -GVDQTHLSVRGAGPDQPIASNADVNGRAQNRRVEVNLKP 223
>gi|119357472|ref|YP_912116.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
DSM 266]
gi|119354821|gb|ABL65692.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 229
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 29/211 (13%)
Query: 6 GLSMFIMTTIS-GCGLASREKKKVFLHKSND---TDIVNKRFG----------------- 44
L + +MTT + GC + + + + I+ G
Sbjct: 13 FLLILVMTTFTWGCSTTTNAGRGAGIGAGSGALIGGIIGSVSGSWVKGALIGAAIGGGAG 72
Query: 45 ----SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ +DK E + G V RIG+ I + F + ++ +
Sbjct: 73 ALIGNYMDKQAAEIDRNV--EGAEVERIGEGIRVVFDSGILFNTGSSAITSTSRYNIEKL 130
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A IL K+ T + I+ HTDS+G+ N +S+ RA + + L++ S+ +S G+
Sbjct: 131 AGILAKYDDTNLIIEGHTDSVGSDSMNQTLSENRAQSVAN-LLKAYGVSSSRLSAIGYGE 189
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
PI +N+T+ GR+ N+R+E+ I +K+
Sbjct: 190 SRPIASNETESGRRLNRRVEVLITANNELKR 220
>gi|262039107|ref|ZP_06012440.1| inner membrane lipoprotein YiaD [Leptotrichia goodfellowii F0264]
gi|261746896|gb|EEY34402.1| inner membrane lipoprotein YiaD [Leptotrichia goodfellowii F0264]
Length = 164
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVS 81
+ K L + V G+ D+ E E + +L +G+ V R G+ I P +++
Sbjct: 1 GKDTKGTLIGTAGGAAVGAVIGNIFDRQEKELKNRLDGSGVKVERTGEGEIKLTAPENIT 60
Query: 82 FVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F + ++ +F L +A +L K+P + I + HTDS G N +S RA +KSY
Sbjct: 61 FDTNSSVIKSRFTGSLNSVADVLKKYPDSNIIVSGHTDSTGNDSINNPLSVNRAASVKSY 120
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L+ GV S+R SV G+ K PI +N T GR N+R+EI+I +
Sbjct: 121 LVGAGVPSSRITSV-GYGSKEPIASNSTANGRAQNRRVEIKIVAK 164
>gi|241764375|ref|ZP_04762401.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
gi|241366218|gb|EER60782.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
Length = 215
Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 29/210 (13%)
Query: 1 MIKELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKR----------------- 42
M K L + + ++ GC S +++
Sbjct: 1 MRKYLIPGVAAVVLLASGCADMSDTQRRTATGAGVGALAGAVLGSATGGHAGTGAVVGAG 60
Query: 43 --------FGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFV-SEVFLEKKF 92
+ ++++ + E + + TGI VS+ D + IP +SF ++ F
Sbjct: 61 VGALGTYIWSQNMERQKREMEQATRGTGIAVSQTQDNQLKLDIPSDISFAVGRADIQPNF 120
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
P+L A L P T + I HTD+ G+ N +S RA ++ + R I
Sbjct: 121 APVLDRFAEGLRAHPETDVRIVGHTDNTGSDAVNDPLSVNRASSTRN-YLMNRGVDGRRI 179
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
SV G + PI TN T GR N+R+EI +
Sbjct: 180 SVEGMGERQPIATNATAEGRSRNRRVEIFV 209
>gi|312959042|ref|ZP_07773561.1| OmpA/MotB [Pseudomonas fluorescens WH6]
gi|311286812|gb|EFQ65374.1| OmpA/MotB [Pseudomonas fluorescens WH6]
Length = 256
Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 48/222 (21%), Positives = 85/222 (38%), Gaps = 41/222 (18%)
Query: 3 KELGLSMFIMTTISGCGLAS---------------------------------------R 23
+ L + + +SGC +
Sbjct: 5 RRLLVVATAVALLSGCASPNPYDGSQGQANNEPSGMSKTAKYGGLGALAGALAGAAIDHN 64
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+ K L + +G D+ E + + + +TG+ V R GD I +P +++F
Sbjct: 65 NRGKGALIGAVVAGAGAAGYGYYADQQEKKLRESMANTGVEVQRQGDQIKLIMPGNITFA 124
Query: 84 SEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ + F L +A L +F I I +TDS G+ + N+ +SQ RA + +YL
Sbjct: 125 TNSDAISSSFYQPLNNLANSLKQFNQNTIQIVGYTDSTGSRQLNMDLSQRRAQSVANYLT 184
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ + +S RG PI +N GR N+R+E+ + P
Sbjct: 185 SQ-GVNGANLSARGAGPDNPIASNADVNGRAQNRRVEVNLGP 225
>gi|294828058|ref|NP_712396.2| endoflagellar motor protein B [Leptospira interrogans serovar Lai
str. 56601]
gi|304570492|ref|YP_001665.2| motility protein B [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|293385905|gb|AAN49414.2| endoflagellar motor protein B [Leptospira interrogans serovar Lai
str. 56601]
Length = 336
Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
R ++ E++ +++ I + R D + I + L+K+ LP L I
Sbjct: 187 DRLSDQANELENKLTDEIKKGQIRLKRFHDRLVINIDDKISFDSGSADLKKQILPALDKI 246
Query: 100 ATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
IL +P +I I+ HTD++ +N +S ERA + Y ++ + R S+
Sbjct: 247 KEILGNYPGNLIIIEGHTDNVPIRTKKFSDNWQLSGERALSVLHYFLESKILDPRNFSLA 306
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G+ PI +NDT R N+R++I + PR
Sbjct: 307 GYGEFQPIVSNDTPENRALNRRVDIVVVPR 336
>gi|330873229|gb|EGH07378.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 229
Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 39/220 (17%)
Query: 3 KELGLSMFIMTTISGCGLAS-------------------------------------REK 25
+ L + + +SGC ++ +
Sbjct: 5 RRLIIVATAVALLSGCATSNPYDNQGQAQSSGGMSKTAKYGGLGALAGAVAGAAIDHNNR 64
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K L + + +G DK E + + +TG+ V R GD I +P +++F
Sbjct: 65 GKGALIGAAVAGAASAGYGYYADKQEAALRASMANTGVEVQRQGDQIKLIMPGNITFATD 124
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ F L +A L +F I I +TDS G+ ++N+ +SQ+RA + +YL +
Sbjct: 125 SSAIASSFYSPLNNLANSLKQFNQNNIEIIGYTDSTGSRQHNMDLSQQRAQSVATYLTSQ 184
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+SVRG PI +N GR N+R+E+ + P
Sbjct: 185 -GVDQSHLSVRGAGPDQPIASNADTNGRAQNRRVEVNLKP 223
>gi|71733414|ref|YP_273324.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|289627857|ref|ZP_06460811.1| ompA family protein [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289648335|ref|ZP_06479678.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 2250]
gi|71553967|gb|AAZ33178.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|330868443|gb|EGH03152.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330988549|gb|EGH86652.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331008919|gb|EGH88975.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 229
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 88/220 (40%), Gaps = 39/220 (17%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSND--------------------------- 35
+ L + + +SGC ++ + S
Sbjct: 5 RRLIIVATAVAMLSGCATSNPYDNQGQAQSSGGMSKTAKYGGLGALAGAVAGAAIDHNHR 64
Query: 36 ----------TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
+ +G DK E + + +TG+ V R GD I +P +++F
Sbjct: 65 GKGALIGAAVAGAASAGYGYYADKQEAALRASMANTGVEVQRQGDQIKLIMPGNITFATD 124
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ F L +A L +F I I +TDS G+ ++N+ +SQ+RA + +YL +
Sbjct: 125 SSAIASSFYSPLNNLANSLKQFNQNNIEIVGYTDSTGSRQHNMDLSQQRAQSVATYLTSQ 184
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
GV + +SVRG PI +N GR N+R+E+ + P
Sbjct: 185 GVDQSH-LSVRGAGPDQPIASNADVNGRAQNRRVEVNLKP 223
>gi|298485733|ref|ZP_07003812.1| Outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298159759|gb|EFI00801.1| Outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 229
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 39/220 (17%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSND--------------------------- 35
+ L + + +SGC ++ + S
Sbjct: 5 RRLIIVATAVAMLSGCATSNPYDNQGQAQSSGGMSKTAKYGGLGALAGAVAGAAIDHNHR 64
Query: 36 ----------TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
+ +G DK E + + +TG+ V R GD I +P +++F
Sbjct: 65 GKGALIGAAVAGAASAGYGYYADKQEAALRASMANTGVEVQRQGDQIKLIMPGNITFATD 124
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ F L +A L +F I I +TDS G+ ++N+ +SQ+RA + +YL +
Sbjct: 125 SSAIASSFYSPLNNLANSLKQFNQNNIEIVGYTDSTGSRQHNMDLSQQRAQSVATYLTSQ 184
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
V + +SVRG PI +N GR N+R+E+ + P
Sbjct: 185 VVDQSH-LSVRGAGPDQPIASNADVNGRAQNRRVEVNLKP 223
>gi|292490769|ref|YP_003526208.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
gi|291579364|gb|ADE13821.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
Length = 301
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 66/173 (38%), Gaps = 10/173 (5%)
Query: 17 GC---GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRI 68
GC + + G LD D + G+ V +
Sbjct: 126 GCPLDSDGDGVPDYLDQCPDTPPGVAVNSEGCPLDSDGDGVTDDVDQCPDTPAGVEVDEV 185
Query: 69 GDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G + V F L + +L A L P + I+ HTDS+G N
Sbjct: 186 GCPEPVVLEGGVHFAFDSAKLTPEARDILDETADSLRTHPDLEVTIEGHTDSVGNADYNK 245
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+SQ RA+ +YL+ +GV +R + G+ PI +N TK GR N+R+E+
Sbjct: 246 RLSQLRAEAAMNYLVSQGVDQSR-LEAVGYGEAQPIASNKTKEGRAQNRRVEL 297
>gi|295675817|ref|YP_003604341.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295435660|gb|ADG14830.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 217
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 78/205 (38%), Gaps = 24/205 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR------------------ 42
++ + + + ++GC V
Sbjct: 5 IMTRVAVLAVAGSLVAGCATQQGTNTAVGTGVGAGAGAALGAIFGGGKGAAIGAATGAAV 64
Query: 43 ---FGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVF-LEKKFLPMLQ 97
G + D + + TG ++ D + IP V+F + + ++ F P+L
Sbjct: 65 GGITGYNWDNIRNRMSGATKGTGTQITEQPDGSLKLNIPSSVTFDTSSYAIKPTFAPVLD 124
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A L + P V ++ HTD+ G+L+ N +S RA + + + + + +S G
Sbjct: 125 QLAQTLQQNPEVVASVVGHTDNTGSLQYNQTLSVNRAQSVT-GYLTQRGIAPQRLSATGM 183
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
PI N+T+ GR N+R+EI +
Sbjct: 184 GPNQPIADNNTEAGRAANRRVEIYL 208
>gi|66044258|ref|YP_234099.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|63254965|gb|AAY36061.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|330945118|gb|EGH46848.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
gi|330969323|gb|EGH69389.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 229
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 39/220 (17%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSND--------------------------- 35
+ L + + +SGC ++ + S
Sbjct: 5 RRLIIVATAVAMLSGCATSNPYDNQGQAQSSGGMSKTAKYGGLGALAGAVAGAAIDHNHR 64
Query: 36 ----------TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
+ +G DK E + + +TG+ V R GD I +P +++F
Sbjct: 65 GKGALIGAAVAGAASAGYGYYADKQEAALRESMANTGVEVQRQGDQIKLIMPGNITFATD 124
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ F L +A+ L +F I I +TDS G+ ++N+ +SQ+RA + +YL +
Sbjct: 125 SSAIASSFYSPLNNLASSLKQFNQNNIEIVGYTDSTGSRQHNMDLSQQRAQSVATYLTSQ 184
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+SVRG PI +N GR N+R+E+ + P
Sbjct: 185 -GVDQAHLSVRGAGPDQPIASNADVNGRAQNRRVEVNLKP 223
>gi|258405399|ref|YP_003198141.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM
5692]
gi|257797626|gb|ACV68563.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692]
Length = 227
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 83/212 (39%), Gaps = 37/212 (17%)
Query: 4 ELGLSMFIMTTISGCGLASREKKK-----------------------------VFLHKSN 34
+ + + ++GC A ++++ +
Sbjct: 7 SIVCVLALALVLAGCATAPNQQQRGTAIGTAAGAGVGAILGQAIGKDTKGTLIGAGIGAV 66
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDT-GIVVSRIGDMITCYIPVHVSF-VSEVFLEKKF 92
I R G+ +D+ E E + L V R D++ +V F ++
Sbjct: 67 LGGIAGNRVGAYMDRQEQELRNALAQERAASVRREQDILRATFDSNVLFDFDSARVKPGG 126
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+ L A++ N++P T I ++ HTD+ G+ + N+ +S+ RA +K ++ + R +
Sbjct: 127 VSELNRAASVFNRYPQTRIRVEGHTDASGSEEYNMDLSRRRAQAVKD-VLVQQGVDPRRV 185
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S G+ P+ ++ N+R+E+ I P
Sbjct: 186 STVGYGETQPVSSDP-----AANRRVEVVIEP 212
>gi|320325748|gb|EFW81809.1| ompA family protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320327336|gb|EFW83350.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330881603|gb|EGH15752.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 229
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 39/220 (17%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSND--------------------------- 35
+ L + + +SGC ++ + S
Sbjct: 5 RRLIIVATAVAMLSGCATSNPYDNQGQAQSSGGMSKTAKYGGLGALAGAVAGAAIDHNHR 64
Query: 36 ----------TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
+ +G DK E + + +TG+ V R GD I +P +++F
Sbjct: 65 GKGALIGAAVAGAASAGYGYYADKQEAALRASMANTGVEVQRQGDQIKLIMPGNITFATD 124
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ F L +A+ L +F I I +TDS G+ ++N+ +SQ+RA + +YL +
Sbjct: 125 SSAIASSFYSPLNNLASSLKQFNQNNIEIVGYTDSTGSRQHNMDLSQQRAQSVATYLTSQ 184
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
GV + +SVRG PI +N GR N+R+E+ + P
Sbjct: 185 GVDQSH-LSVRGAGPDQPIASNADVNGRAQNRRVEVNLKP 223
>gi|170691988|ref|ZP_02883152.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170143272|gb|EDT11436.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 217
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 74/205 (36%), Gaps = 24/205 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF----------------- 43
++ L + + ++GC V T
Sbjct: 5 IMTRLAVFAVAGSLLAGCASQQGTNTAVGTGVGAGTGAALGAIFGGGKGAAIGAGVGAAV 64
Query: 44 ----GSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVF-LEKKFLPMLQ 97
G + ++ + TG ++ D + IP V+F + + ++ F P+L
Sbjct: 65 GGITGYNWQSIHNKLSGATKGTGTQITEQPDGSLKLNIPSSVTFDTNSYAIKPSFAPVLD 124
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ L + P + + HTDS G N +S RA + + + + + +S G
Sbjct: 125 QLTQTLQQNPEVIAQVVGHTDSTGQPAYNQTLSVNRAQSVT-GYLAQRGVAPQRLSAEGM 183
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
PI N+T+ GR N+R+EI +
Sbjct: 184 GQNQPIADNNTEAGRAANRRVEIYL 208
>gi|59713771|ref|YP_206546.1| OmpA family domain-containing protein [Vibrio fischeri ES114]
gi|197337822|ref|YP_002158145.1| OmpA family protein [Vibrio fischeri MJ11]
gi|59482019|gb|AAW87658.1| OmpA family domain protein [Vibrio fischeri ES114]
gi|197315074|gb|ACH64523.1| OmpA family protein [Vibrio fischeri MJ11]
Length = 184
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 10/185 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K+L + + + GC S ++ S +D ++ Q + +
Sbjct: 1 MKKQLLGIIISASLLMGCQSTSDDEMADI--------AETPTVASFVDYHNEQLQQFVTE 52
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
V++ + I + SF S ++ + +L +A +LN P + + I HTDS
Sbjct: 53 DIGSVAQTNEEIIILLNGDKSFDSGSIEIKNESKLVLSQLAKLLNDKPESEVFIAGHTDS 112
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ K N+ +S +RAD + + L++ I+ GF PI TN GR+ N+RIE
Sbjct: 113 RGSKKFNMSLSNQRADSVLA-LLEENGVDGNRINTYGFGESEPIATNINAEGRKKNRRIE 171
Query: 180 IQIFP 184
I+I P
Sbjct: 172 IRITP 176
>gi|319955316|ref|YP_004166583.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319423976|gb|ADV51085.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 238
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/225 (16%), Positives = 79/225 (35%), Gaps = 36/225 (16%)
Query: 1 MIKELGL----SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR-------------- 42
M+K +GL + +T C K
Sbjct: 8 MMKNIGLKLSTVILAVTLTVSCSAVKNANNKQKGAVIGAGSGAAIGGILGNNIGNGNNTA 67
Query: 43 ----------------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-E 85
G+ +DK + + ++ + G + V F + +
Sbjct: 68 LGAIIGAVVGGAAGGYIGNRMDKQAERIEEEIPGAEVTRVGEGINVVFNEDAGVYFDTNK 127
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
++ +L + IL ++P + I ++ HTDS G N+ +S++RA+ + S +
Sbjct: 128 SVVKGTSATILDRLVGILKEYPDSNILVEGHTDSAGPADYNMNLSKQRAESVTS-YLNTH 186
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
S+ ++ + + P N T G+ N+R+E+ I +K+
Sbjct: 187 GISSNRLTTKWYGETQPKSDNSTTEGKAKNRRVEMVIVASDELKQ 231
>gi|253701833|ref|YP_003023022.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251776683|gb|ACT19264.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 228
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 5/169 (2%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ + +V G +D+ + + + V R GD + +P +
Sbjct: 57 KSHRGRNAAIGGLTGAVVGGAVGQYMDRQAVALKKSMPE--AEVVRDGDKVYVALPSGIL 114
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F + L+ L A L T I I+ HTDS G+ N +S+ RA+ ++ Y
Sbjct: 115 FDVGKDVLKPDAKDSLSRAAATLKD-SQTTITIEGHTDSTGSNAINQPLSERRANRVRDY 173
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
L+ +GV + + G+ P ND+ R N+R++I++ P +K
Sbjct: 174 LVSQGVPGAKM-AAIGYGSSRPAVPNDSDANRALNRRVQIELTPNEKLK 221
>gi|319943060|ref|ZP_08017343.1| lipoprotein [Lautropia mirabilis ATCC 51599]
gi|319743602|gb|EFV96006.1| lipoprotein [Lautropia mirabilis ATCC 51599]
Length = 319
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT-CYIPVHVSFV- 83
+ L I + +++ + + TG+ V++ + + IP +SF
Sbjct: 80 RNGALIGGAIAGIGTYIWSRQMEEQKRAMEEATAGTGVQVTQTRENLLQLDIPSDISFRV 139
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ + F P+L A L P+T + I HTDS GT N +S RA + YL+
Sbjct: 140 NSAAILPNFQPILDRFAQTLVANPATTVQIIGHTDSTGTDAINNPLSVNRAASARDYLVA 199
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RGV +R + + G + PI N T GR N+R+EI +
Sbjct: 200 RGVQVSRIM-IDGRGSRDPIADNSTPAGRAQNRRVEIYV 237
>gi|322418405|ref|YP_004197628.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320124792|gb|ADW12352.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 228
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 5/169 (2%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ + +V G+ +D+ + + V R GD + +P +
Sbjct: 57 KSHRGRNAAIGGLTGAVVGGAVGNYMDRQAAALKKSMPQ--AEVIRDGDKVYVALPSGIL 114
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F + L+ + L L T I I+ HTDS G+ N +S+ RA ++ +
Sbjct: 115 FDVGKDTLKPEAKDALSKAVPTLRD-SQTTIVIEGHTDSTGSNAVNQPLSERRAGRVRDF 173
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
LI +GV ++ + G+ P NDT+ R N+R++I++ P +K
Sbjct: 174 LISQGVPGSKM-AAVGYGSTRPAVANDTEANRALNRRVQIELSPNEKLK 221
>gi|289208562|ref|YP_003460628.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288944193|gb|ADC71892.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 238
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPM 95
+ R G +D + +L + + R G +IT P + + +
Sbjct: 87 SVALDRVGFYMDVLTARLRQKLAGHDVEMEREGRIITLIFPGAKAFETNSAEIHPDMVST 146
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + +L ++ ++++ I HTDS G N +S++RA + +L GV R I++
Sbjct: 147 LDALGQVLEEYDASLVTIAGHTDSAGARGYNQHLSEQRALSVGRHLHDNGVGEARIIAI- 205
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G+ PI NDT GR N+R+E+++ P
Sbjct: 206 GYGPDRPIADNDTPHGRALNRRVELRVEP 234
>gi|222869877|gb|EEF07008.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 3/164 (1%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVH 79
+ + + + +++K + E + Q TG+ VS+ D + IP
Sbjct: 26 TGGRAGTGAVIGAGVGALGTYIWSQNMEKQKREMEQATQGTGVNVSQTADNQLKLDIPSD 85
Query: 80 VSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+SF + ++ F P+L A L P+ + I HTDS G+ N +S +RA+ +
Sbjct: 86 ISFDTNRSDIKGNFAPILDRFAEGLRNNPNAEVRIIGHTDSTGSDAINNPLSLDRANSTR 145
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+YL RGVS R I+ G P+ +ND+ GR N+R+EI +
Sbjct: 146 NYLTMRGVSGAR-IATEGRGSHQPVASNDSASGRAMNRRVEIFV 188
>gi|222529065|ref|YP_002572947.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|312622679|ref|YP_004024292.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|222455912|gb|ACM60174.1| OmpA/MotB domain protein [Caldicellulosiruptor bescii DSM 6725]
gi|312203146|gb|ADQ46473.1| OmpA/MotB domain protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 257
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 7/171 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF---QMQLQDTGIVVSRIGDMITCYI 76
K + D + + + ++V + ++ +
Sbjct: 76 SGKNVKGTNTDVGGATKNKQMTEEELINDIQKQVLGLIKEHGIEGKVLVIQEERGLSILL 135
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN----LLISQE 132
+ L + ++ IA IL K P+ I I+ HTD++ +S
Sbjct: 136 KDVLFDTGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTA 195
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + +++ SV G+ PI +N T GR N+R+ I I
Sbjct: 196 RATSVLQEILRVSKVRPERFSVVGYGEYRPIASNKTPEGRALNRRVTIVIL 246
>gi|156974345|ref|YP_001445252.1| hypothetical protein VIBHAR_02060 [Vibrio harveyi ATCC BAA-1116]
gi|156525939|gb|ABU71025.1| hypothetical protein VIBHAR_02060 [Vibrio harveyi ATCC BAA-1116]
Length = 219
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 39/216 (18%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG---------------------- 44
+++ ++ ++GC R+ +++N T
Sbjct: 3 IALALVLALTGCQATQRQNATTGEYETNSTTQGALIGAIAGAAIGLAVGDNAKERRKGAL 62
Query: 45 --------------SSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVSEVFLE 89
D+ E E + L ++G+ V R+G + + + + F S +
Sbjct: 63 IGAAAGGATGAGVGYYFDQQEAELRRALLNSGVQVERVGENQLLLRMENGIGFSSSSYQL 122
Query: 90 KKF-LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
L+ +A IL ++P T + I +TDS G+ N +S+ RA+ ++ YL+ + V+
Sbjct: 123 DSSIHNTLRGVARILVEYPDTSLVIDGYTDSTGSDSYNQTLSERRAESVRQYLVSQKVAP 182
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R I RG+ + PI +N T GR N+R+EIQI P
Sbjct: 183 GRAI-ARGYGERNPICSNQTSDGRACNRRVEIQILP 217
>gi|312877226|ref|ZP_07737195.1| OmpA/MotB domain protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311796035|gb|EFR12395.1| OmpA/MotB domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 257
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 7/171 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF---QMQLQDTGIVVSRIGDMITCYI 76
K + D + + + ++V + ++ +
Sbjct: 76 SGKNVKGTNTDVGGATKNKQMTEEELINDIQKQILGLIKEHGIEGKVLVIQEERGLSILL 135
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN----LLISQE 132
+ L + ++ IA IL K P+ I I+ HTD++ +S
Sbjct: 136 KDVLFDTGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTA 195
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + +++ SV G+ PI +N T GR N+R+ I I
Sbjct: 196 RATSVLQEILRVSKVRPERFSVVGYGEYRPIASNKTPEGRALNRRVTIVIL 246
>gi|312793260|ref|YP_004026183.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180400|gb|ADQ40570.1| OmpA/MotB domain protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 257
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 7/171 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF---QMQLQDTGIVVSRIGDMITCYI 76
K + D + + + ++V + ++ +
Sbjct: 76 SGKNVKGTNTDVGGATKNKQMTEEELINDIQKQVLGLIKEHGIEGKVLVIQEERGLSILL 135
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN----LLISQE 132
+ L + ++ IA IL K P+ I I+ HTD++ +S
Sbjct: 136 KDVLFDTGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTA 195
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + +++ SV G+ PI +N T GR N+R+ I I
Sbjct: 196 RATSVLQEILRVSKVRPERFSVVGYGEYRPIASNKTPEGRALNRRVTIVIL 246
>gi|330961787|gb|EGH62047.1| ompA family protein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 229
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 39/220 (17%)
Query: 3 KELGLSMFIMTTISGCGLAS-------------------------------------REK 25
+ L L + +SGC + +
Sbjct: 5 RRLILVATAVAMLSGCATPNPYDNQGQAQSSGGMSKTAKYGGLGALAGAVAGAAIDHNNR 64
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K L + + +G DK E + + +TG+ V R GD I +P +++F
Sbjct: 65 GKGALIGAAVAGAASAGYGYYADKQEAALRASMANTGVEVQRQGDQIKLIMPGNITFATD 124
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ F L +A L +F I I +TDS G+ ++N+ +SQ+RA + +YL +
Sbjct: 125 SSAIASSFYSPLNNLANSLKQFNQNNIEIVGYTDSTGSRQHNMDLSQQRAQSVATYLTSQ 184
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
GV + +SVRG PI +N GR N+R+E+ + P
Sbjct: 185 GVDQSH-LSVRGAGPDQPIASNADVNGRAQNRRVEVNLKP 223
>gi|89899024|ref|YP_521495.1| OmpA/MotB [Rhodoferax ferrireducens T118]
gi|89343761|gb|ABD67964.1| OmpA/MotB [Rhodoferax ferrireducens T118]
Length = 217
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 23/200 (11%)
Query: 8 SMFIMTTISGCGLASR--------------------EKKKVFLHKSNDTDIVNKRFGSSL 47
+ +SGC + + ++ + + + + + +
Sbjct: 15 VSAVALLVSGCANMTETQRSSAIGAGVGALAGAAIGDSREATVIGAGVGALGGYIWSTQM 74
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNK 105
K + + + TG+ V + D + IP + ++ ++ P+L A L+
Sbjct: 75 AKKKADMERATAGTGVDVMQTADNQLKLNIPSDISFDINRFDIKPNMRPILDQFAQGLSS 134
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P+T I I HTDS G+ N +S RA + YL+ R R I + G PI
Sbjct: 135 QPNTEIRIIGHTDSTGSDSINDPLSVNRAASARDYLVAR-GVDGRRIQINGRGSHEPIAD 193
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
N+T+ GR N+RIEI + R
Sbjct: 194 NNTERGRAQNRRIEIFLAER 213
>gi|226951234|ref|ZP_03821698.1| OmpA/MotB domain-containing protein [Acinetobacter sp. ATCC 27244]
gi|226838028|gb|EEH70411.1| OmpA/MotB domain-containing protein [Acinetobacter sp. ATCC 27244]
Length = 213
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 74/142 (52%), Gaps = 3/142 (2%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL 103
LD E + + Q+Q TG+ V R D + +P ++F ++ ++ F L +A +L
Sbjct: 72 YLDNKEKKLRQQMQGTGVDVGRNPDGSVQLIMPGSITFDTNKSNIKPNFYATLNKVAQVL 131
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + I + +TD+ G N+ +SQ RA +K+YL + ++ I +G+ PI
Sbjct: 132 GEDNQSAILVTGYTDNTGNDSINIPLSQARAQSVKNYLAGK-GIASNRIDAQGYGSSNPI 190
Query: 164 DTNDTKVGRQNNQRIEIQIFPR 185
N T GR+ N+R+EI I+ +
Sbjct: 191 ADNSTAAGREQNRRVEISIYAK 212
>gi|257457774|ref|ZP_05622935.1| OmpA family protein [Treponema vincentii ATCC 35580]
gi|257444824|gb|EEV19906.1| OmpA family protein [Treponema vincentii ATCC 35580]
Length = 434
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 5/164 (3%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAE--DEFQMQLQDTGI---VVSRIGDMITCYIPVHVS 81
+ + T +DK + + ++D GI V R + IT +
Sbjct: 271 TGAVIEYRGTAKAELTLLQRMDKEKIVEILDKNIRDMGIPNTTVERTDEGITISLENIQF 330
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L L+ I IL +P + I HT G ++ ++S++RA + +YL
Sbjct: 331 EPDSARLLPAEKEKLKKIGDILASYPDYELLISGHTALAGRAEDRQVLSEQRASAVANYL 390
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
I+ GV I RGF + PI N T+ + N+R+EI + +
Sbjct: 391 IELGVREKHHIFTRGFGAEKPIAPNTTEANKARNRRVEITVLEK 434
>gi|254436394|ref|ZP_05049900.1| Thrombospondin type 3 repeat family [Nitrosococcus oceani AFC27]
gi|207088084|gb|EDZ65357.1| Thrombospondin type 3 repeat family [Nitrosococcus oceani AFC27]
Length = 344
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 8/165 (4%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + D +D+ D G+ V +G +
Sbjct: 182 CPDTPMGVEVNSQGCPLSVDSDGDGVPDDIDECPD------TAYGVDVDEVGCPKPVVLE 235
Query: 78 VHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V F L +L + + +P I I HTDS G N +SQ RA+
Sbjct: 236 DGVHFGFDSAKLSPNAHTILDKVVENMRTYPDLEITIAGHTDSTGNADYNQRLSQLRAEA 295
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+YL +G+ +R ++ G+ + PI +N TK GR N+R+E+Q
Sbjct: 296 AMNYLASKGIDPSRMEAI-GYGEERPIASNSTKEGRAKNRRVELQ 339
>gi|77165990|ref|YP_344515.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|76884304|gb|ABA58985.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
Length = 319
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 8/165 (4%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + D +D+ D G+ V +G +
Sbjct: 157 CPDTPMGVEVNSQGCPLSVDSDGDGVPDDIDECPD------TAYGVDVDEVGCPKPVVLE 210
Query: 78 VHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V F L +L + + +P I I HTDS G N +SQ RA+
Sbjct: 211 DGVHFGFDSAKLSPNAHTILDKVVENMRTYPDLEITIAGHTDSTGNADYNQRLSQLRAEA 270
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+YL +G+ +R ++ G+ + PI +N TK GR N+R+E+Q
Sbjct: 271 AMNYLASKGIDPSRMEAI-GYGEERPIASNSTKEGRAKNRRVELQ 314
>gi|294506240|ref|YP_003570298.1| Outer membrane protein A [Precursor] [Salinibacter ruber M8]
gi|294342568|emb|CBH23346.1| Outer membrane protein A [Precursor] [Salinibacter ruber M8]
Length = 285
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATIL 103
S +D +E +L + V R+G+ I + F L + L A +
Sbjct: 130 SRMDTKAEELDEELDN--ADVERVGEGIKVTFDSGILFDFDSSTLRAEARQNLTEFAESM 187
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
F T I + HTD+ G+ + N +S RA+ +L+ RGV +R SV G P+
Sbjct: 188 QGFEDTKILVVGHTDAQGSEEYNQKLSDRRAESATRHLVDRGVDPSRLTSV-GRGETEPV 246
Query: 164 DTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+N+T+ GRQ N+R+E+ I+ ++
Sbjct: 247 ASNETEEGRQQNRRVEVAIYANEEYRE 273
>gi|319957287|ref|YP_004168550.1| ompa/motb domain protein [Nitratifractor salsuginis DSM 16511]
gi|319419691|gb|ADV46801.1| OmpA/MotB domain protein [Nitratifractor salsuginis DSM 16511]
Length = 351
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPST 109
+ E + + GI+V + + +P V F ++ L+ + L ++A + P+
Sbjct: 217 KAEAKPTPEQVGIIVRKTSEGSMLTVPEKVLFDFNKFILKPEAKKALDVVADYIRSHPAR 276
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I + +TD+IGT NL +S +RA + YL+ G + + G PI N T+
Sbjct: 277 QIVVTGYTDNIGTDAYNLRLSLQRAQSVADYLMDCGKVDPKLFKIVGKGKANPIADNATE 336
Query: 170 VGRQNNQRIEIQIF 183
GR N+R+EI++
Sbjct: 337 EGRAKNRRVEIRLI 350
>gi|114332359|ref|YP_748581.1| OmpA/MotB domain-containing protein [Nitrosomonas eutropha C91]
gi|114309373|gb|ABI60616.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91]
Length = 220
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 81/212 (38%), Gaps = 31/212 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR----------------- 42
M K + + + + +SGC + ++
Sbjct: 1 MYKAIVITASLVGFIVSGCADMTATQRGSGTGALLGAGTGAAIGALAGGGKGAAIGAGAG 60
Query: 43 ----------FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEK 90
+ +++ + + + TG++VS+ + + IP + ++
Sbjct: 61 AALGAGAGYLWSKRMEEQKIQMENATAGTGVMVSQTADNRLMLNIPSDISFDTGSAQIKP 120
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
F P+L AT L P T + I HTD+ G+ N +S RA + YL RGV R
Sbjct: 121 GFRPILDSFATSLLNNPGTHVTIVGHTDNTGSDAVNNPLSVNRAASTREYLAGRGVPFQR 180
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I + G P+ +N+T GR N+R+EI +
Sbjct: 181 -IQIDGRGSYQPVASNNTAAGRARNRRVEIYV 211
>gi|163744900|ref|ZP_02152260.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45]
gi|161381718|gb|EDQ06127.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45]
Length = 221
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 3/169 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + + + + G SLDK E E + + D+ +V++ GD + +P
Sbjct: 54 SKGDGNRTEAAVKGALVGGAIGAGVGYSLDKQEAELRAAM-DSRVVITNTGDRLIVTLPQ 112
Query: 79 HVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ F ++ + L +A +N + ++ + + HTDS G N +S+ RA +
Sbjct: 113 DILFATDSTSVAPGLRDDLAALAQNVNIYQNSTLQVVGHTDSDGEAAYNQQLSERRAQAV 172
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ L+ + + G P+ +N + G+ N+R+EI I P
Sbjct: 173 GNILLSN-GVPQQRLQTFGRGESQPVASNLSAAGKSQNRRVEIVILPNA 220
>gi|209809406|ref|YP_002264944.1| putative outer membrane protein, OmpA family [Aliivibrio
salmonicida LFI1238]
gi|208010968|emb|CAQ81375.1| putative outer membrane protein, OmpA family [Aliivibrio
salmonicida LFI1238]
Length = 185
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 10/189 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + + + +SGC S ++ T + D+ +
Sbjct: 1 MKKHLLEVIIVGSLLSGCQSTSEDETTAI----KSTPTIESFITYHHDELNAIITDDIG- 55
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
V+++ D I + SF S ++ + L +A +LN P + + I HTDS
Sbjct: 56 ---SVAQVNDEIIVLLNGDTSFDSGSIVIKSESKDALTQLAQLLNNKPRSEVFIAGHTDS 112
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N +S +RA+ + + L+++ I+ GF PI +N GR+ N+RIE
Sbjct: 113 SGSKQFNTSLSNKRANSVLA-LLEQKGVDANRINTYGFGEAEPIASNMNANGRKKNRRIE 171
Query: 180 IQIFPRGNI 188
I+I P ++
Sbjct: 172 IRITPVADL 180
>gi|229588474|ref|YP_002870593.1| hypothetical protein PFLU0931 [Pseudomonas fluorescens SBW25]
gi|229360340|emb|CAY47197.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 257
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 86/223 (38%), Gaps = 42/223 (18%)
Query: 3 KELGLSMFIMTTISGCGLAS---------------------------------------- 22
+ L + ++ +SGC +
Sbjct: 5 RRLLVVATVVALLSGCASPNPYDGSSQGQASNESGGMSKTAKYGGLGALAGALAGAAIDH 64
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + +G D+ E + + + +TG+ V R GD I +P +++F
Sbjct: 65 NNRGKGALIGAVVAGAGAAGYGYYADQQEKKLRESMANTGVEVQRQGDQIKLIMPGNITF 124
Query: 83 VSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ + F L +A L +F I I +TDS G+ + N+ +SQ RA + +YL
Sbjct: 125 ATNSDAISSSFYQPLNNLANSLKQFNQNTIQIVGYTDSTGSRQLNMDLSQRRAQSVANYL 184
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ + +S RG PI +N GR N+R+E+ + P
Sbjct: 185 TSQ-GVNGANLSARGAGPDNPIASNADVNGRAQNRRVEVNLGP 226
>gi|89054158|ref|YP_509609.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88863707|gb|ABD54584.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 219
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + + + G++LD+ + + L + I++ G+ + +P
Sbjct: 54 SGDDNRGRNAVLGAAVGAAAGGAIGNALDRQAQDLRGSLSNERILIENTGEALILTLPEG 113
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ F + L+ +A LN++P T + ++ HTD+ G+ N +S RA +
Sbjct: 114 ILFDVDSAAIRAGLQGDLRALAFNLNQYPDTRVVVEGHTDNTGSASYNQDLSTRRAQAVS 173
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L++ GV+ R SV G PI TN T GRQ N+R+E+ I P+
Sbjct: 174 GVLLEGGVAPFRVQSV-GRGESAPIATNLTPEGRQQNRRVEVIIRPQ 219
>gi|307718975|ref|YP_003874507.1| hypothetical protein STHERM_c12930 [Spirochaeta thermophila DSM
6192]
gi|306532700|gb|ADN02234.1| hypothetical protein STHERM_c12930 [Spirochaeta thermophila DSM
6192]
Length = 395
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 5/165 (3%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAE-----DEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
K +++ T + S LD+ + + LQ V + +T +
Sbjct: 231 KTGDVYEFTGTADAEVVWASPLDREKVREEVEAAIEDLQIPDAEVETSEEGVTIRLENIQ 290
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L + L+ IA IL+++P + ++ HT GT + L +S ERA + +
Sbjct: 291 FPPDSALLLPEEQEKLRKIAQILSRYPERDLLVEGHTALAGTPEGRLALSIERAKAVADF 350
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L++ GV I +RG+ PI N T+ GR N+R+EI I
Sbjct: 351 LMKLGVRRPEQIVIRGYGATRPIADNTTEEGRSRNRRVEITILEN 395
>gi|302872092|ref|YP_003840728.1| OmpA/MotB domain protein [Caldicellulosiruptor obsidiansis OB47]
gi|302574951|gb|ADL42742.1| OmpA/MotB domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 257
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 7/171 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF---QMQLQDTGIVVSRIGDMITCYI 76
K + D + + + ++V + ++ +
Sbjct: 76 SGKNVKGTNTDVGGATKNRQMTEEELINDIQKQVLGLIKEHGIEGKVLVIQEERGLSILL 135
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN----LLISQE 132
+ L + ++ IA IL K P+ I I+ HTD++ +S
Sbjct: 136 KDVLFDTGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTA 195
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + +++ SV G+ PI +N T GR N+R+ I I
Sbjct: 196 RATSVLQEILRVSKVKPERFSVVGYGEYRPIASNKTPEGRALNRRVTIVIL 246
>gi|116748592|ref|YP_845279.1| OmpA/MotB domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116697656|gb|ABK16844.1| OmpA/MotB domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 182
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 5 LGLSMFIMTTISGCGL-ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-DTG 62
L I +SGC E K T G +++ E E ++ G
Sbjct: 6 FVLLACIAFMMSGCASLMPGESSKDANKSLAPTA------GGYIERQEAELVQRMTRADG 59
Query: 63 IVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ R D + V F + L+ + +A +L K+P+T I + TD G
Sbjct: 60 TSIQREQDKLCITFNCGVLFPDDSTELKPDAPARIAPVAEVLAKYPATSIKVDGFTDRTG 119
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ K + I++ RA ++ L+ +G+ R I RGF P+ TN T GR+ N+R+ I
Sbjct: 120 SEKYDHEITESRATAVRDVLVGKGIDPAR-IRARGFGDSKPLTTNATDEGRRTNRRVTIT 178
Query: 182 IFP 184
I P
Sbjct: 179 IAP 181
>gi|150007860|ref|YP_001302603.1| OmpA family outer membrane protein [Parabacteroides distasonis ATCC
8503]
gi|262381639|ref|ZP_06074777.1| outer membrane protein [Bacteroides sp. 2_1_33B]
gi|298376779|ref|ZP_06986734.1| lipoprotein PG3 [Bacteroides sp. 3_1_19]
gi|301310112|ref|ZP_07216051.1| lipoprotein PG3 [Bacteroides sp. 20_3]
gi|149936284|gb|ABR42981.1| outer membrane protein, OmpA family [Parabacteroides distasonis
ATCC 8503]
gi|262296816|gb|EEY84746.1| outer membrane protein [Bacteroides sp. 2_1_33B]
gi|298266657|gb|EFI08315.1| lipoprotein PG3 [Bacteroides sp. 3_1_19]
gi|300831686|gb|EFK62317.1| lipoprotein PG3 [Bacteroides sp. 20_3]
Length = 227
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/218 (22%), Positives = 82/218 (37%), Gaps = 31/218 (14%)
Query: 1 MIKEL----GLSMFIMTTISGCGL------------------------ASREKKKVFLHK 32
M++ + L + + + CG + +
Sbjct: 1 MMRNIKLLSVLLLCMAVVFTSCGTWNNTAKGTAIGVGGGAAVGAGVGALAGNTALGAVIG 60
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQL-QDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEK 90
+ G +DK + E + L +DT I G+ + + F + L
Sbjct: 61 AAVGGTAGALIGKKMDKQKKELEATLPEDTKIESVNNGEALKVTFDSGILFATNSSTLSD 120
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L+ AT L P T I I TD+ G + N +S++RA + YL+ +GVS++R
Sbjct: 121 ASKSALRNFATSLKANPDTDIRIIGFTDNTGKVDYNQTLSEKRAKSVYDYLMMQGVSTDR 180
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ G P+ +NDT GR N+R+EI I +
Sbjct: 181 MVY-EGKGIHDPVASNDTPEGRSLNRRVEIVILANQKM 217
>gi|224373377|ref|YP_002607749.1| major outer membrane protein [Nautilia profundicola AmH]
gi|223589055|gb|ACM92791.1| major outer membrane protein [Nautilia profundicola AmH]
Length = 209
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/215 (23%), Positives = 85/215 (39%), Gaps = 37/215 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHK---------------------------- 32
M K + + I GC V L
Sbjct: 1 MKKIIIATAITGLFIVGCAEKPMATSVVDLAGNKKVIGWQDNNNTTDVKKVEVKEVKVVK 60
Query: 33 -SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
D N ++DK + + L V G I + ++ F ++ ++K
Sbjct: 61 CEPIKDSDNDGVPDNIDKCPNTPENML------VDHNGCPIITTLRLNFDF-NKAVVKKI 113
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ P LQ +A IL P+ I + HTD+IG+ + NL +SQ+RA+ +K+ L+ +
Sbjct: 114 YYPELQKVAEILKNNPNLKIEVAGHTDNIGSDEYNLKLSQKRAEAVKNILVNKFGIDPSR 173
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ-IFPR 185
I +G+ KYP+ N T+ R N+R+EI I +
Sbjct: 174 IVAKGYGEKYPLVPNTTETNRALNRRVEIVNITNK 208
>gi|103488577|ref|YP_618138.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
gi|98978654|gb|ABF54805.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
Length = 230
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 84/221 (38%), Gaps = 38/221 (17%)
Query: 1 MIKE-----LGLSMFIMTTISGCGLASREKKKVFLHKS---------------------- 33
M+K L+ ++GC ++ +
Sbjct: 1 MMKSRTTRLAFLTGLGAIALTGCVTDPVTGERKISKAAIGGVGGALGGYLLGDLIGGRSD 60
Query: 34 --------NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-S 84
+ G +D+ E + + + TGI V R GD + +P V+F +
Sbjct: 61 RTEKIVGAGIGAVAGAGVGYYMDQQEKKLRERTAGTGIDVERQGDQLVLNMPGDVTFDLN 120
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
++ +F L +A L ++PST I + HTDS G+ N +S+ RA + YL R
Sbjct: 121 SAMVKSQFRSALDNVAATLAEYPSTYIDVYGHTDSTGSETYNQGLSERRAASVADYLAGR 180
Query: 145 GVSSNRFISVRGFAYKYPI-DTNDTKVGRQNNQRIEIQIFP 184
G+ R + G+ T+ Q N+R+EI+I P
Sbjct: 181 GIQRARM-ATLGYGESQLKCAPERTEADYQCNRRVEIRIAP 220
>gi|255530097|ref|YP_003090469.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255343081|gb|ACU02407.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 263
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + + + G +DK E Q + + V R G+ I
Sbjct: 87 GKKAGNTAVGAIIGAAVGGTAGGFIGKRMDKQAAEIQNAIPN--AEVIREGEGIIVKFDS 144
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ F + L + ++ +A LN++P T I + HTD+ GT N+ +S+ RA +
Sbjct: 145 GILFGFDKSDLTAQAKTNIKSLAGSLNQYPGTDIKVIGHTDNKGTEAYNMGLSERRAAAV 204
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
K+Y + +GV S+R I++ G + PI+ N T+ GR N+R+E+ I +KK
Sbjct: 205 KAYAVSQGVPSSRLITI-GKGFSEPIEDNSTEAGRAANRRVEVVIVANDQLKK 256
>gi|183222506|ref|YP_001840502.1| hypothetical protein LEPBI_I3161 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912543|ref|YP_001964098.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167777219|gb|ABZ95520.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167780928|gb|ABZ99226.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 475
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
D+ + + V D I + + ++ L+ + IA IL K+P I
Sbjct: 342 DDPNQIAEQLPVKVRTTEDGIVFSLDSILFDFNDSKLKVDAESAVAKIAEILKKYPDREI 401
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ HTD+IG + N +S+ERA + L+ + IS RG+A ++P+ ND++
Sbjct: 402 RVSGHTDNIGKKEYNQKLSEERAKSVLHSLVDNHKMDEKHISFRGYADEFPVAPNDSEEN 461
Query: 172 RQNNQRIEIQIF 183
R N+R+EI +
Sbjct: 462 RHKNRRVEITLV 473
>gi|83944251|ref|ZP_00956706.1| OmpA family protein [Sulfitobacter sp. EE-36]
gi|83953292|ref|ZP_00962014.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
gi|83842260|gb|EAP81428.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
gi|83844795|gb|EAP82677.1| OmpA family protein [Sulfitobacter sp. EE-36]
Length = 222
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 84/219 (38%), Gaps = 36/219 (16%)
Query: 2 IKELGLSMFIMTTISGC-----GLASREKKKVFLHKSNDTDIVNKRFGS----------- 45
+ +++ + ++ C G + + + G+
Sbjct: 5 KTSIAVALTSVLALAACEPGPIGGNPNDPNANTRNGALIGAGTGAVIGALSKGDGNRAQG 64
Query: 46 -----------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF- 87
SLDK E + + QL ++++ GD + +P + F ++
Sbjct: 65 ALAGAVAGGALGAGYGYSLDKQEADLRRQLDSD-VIITNTGDRLIVTLPQDILFATDSTQ 123
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ L +A +N + ++ + I HTDS G N +S+ RA + + L+ GV
Sbjct: 124 VQAGMQNDLAALARNVNVYSNSTLQIVGHTDSDGEASYNQQLSEGRARAVANVLVSNGVP 183
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+R SV G P+ +N G+ N+R+EI I P
Sbjct: 184 GSRIQSV-GRGESQPVASNLNAAGKAQNRRVEIVILPNA 221
>gi|323525137|ref|YP_004227290.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323382139|gb|ADX54230.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 217
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 75/205 (36%), Gaps = 24/205 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF----------------- 43
++ L + + ++GC V T
Sbjct: 5 IMTRLAVFAVAGSVLAGCASQQGTNTAVGTGVGAGTGAALGAIFGGGKGAAIGAGVGAAV 64
Query: 44 ----GSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVF-LEKKFLPMLQ 97
G + ++ + TG ++ D + IP V+F + + ++ F P+L
Sbjct: 65 GGITGYNWQAIHNKLSGATKGTGTQITEQPDGSLKLNIPSSVTFDTNSYAIKPSFAPVLD 124
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ L + P + + HTDS G N +S RA + +++ + + +S +G
Sbjct: 125 QLTQTLQQNPEVIAQVVGHTDSTGQPAYNQTLSVNRAQSVV-GFLEQRGVAPQRLSAQGM 183
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
PI N T+ GR N+R+EI +
Sbjct: 184 GQNQPIADNSTEAGRAANRRVEIYL 208
>gi|226939690|ref|YP_002794763.1| OmpA/MotB [Laribacter hongkongensis HLHK9]
gi|226714616|gb|ACO73754.1| OmpA/MotB [Laribacter hongkongensis HLHK9]
Length = 225
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 84/220 (38%), Gaps = 36/220 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-------------------- 44
L S+ + ++GC ++ L + I+ G
Sbjct: 7 LVASVALAMIVTGCASQPGQQNPGGLSNTGMGAIIGTLGGAAAGALIGNSGKGALIGAAA 66
Query: 45 ---------SSLDKAEDEF----QMQLQDTGIVVSRIGDM-ITCYIPVHVSFV-SEVFLE 89
+D+ + E + ++ + + + D + + +F + ++
Sbjct: 67 GAALGTGVGYYMDRQKAELESKLRSEISSGQMQLQQNADQSLVVTMNEDATFNLNSAVVK 126
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
F P + +A L ++ T + I+ +TDS G N +S +RA+ +KSYL+ + +
Sbjct: 127 PAFYPTMNKVAETLKQYNQTTLVIRGYTDSTGAAAYNQQLSLKRANAVKSYLVGQ-GVAA 185
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
I G P +NDT GR N+R+ I I P+ +
Sbjct: 186 NRIQTIGMGESDPRASNDTAQGRAMNRRVSITIVPQQGAQ 225
>gi|315186462|gb|EFU20222.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578]
Length = 395
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 5/165 (3%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAE-----DEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
K +++ T + S LD+ + + LQ V + +T +
Sbjct: 231 KTGDVYEFTGTADAEVVWASPLDREKVREEVEAAIEDLQIPDAEVETSEEGVTIRLENIQ 290
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L + L+ IA IL+++P + ++ HT GT + L +S ERA + +
Sbjct: 291 FPPDSAVLLPEEQEKLRKIAQILSRYPERDLLVEGHTALAGTPEGRLALSIERAKAVADF 350
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L++ GV I ++G+ PI N T+ GR N+R+EI I
Sbjct: 351 LMKLGVRRPEQIVIQGYGATRPIADNATEAGRSRNRRVEITILEN 395
>gi|78187197|ref|YP_375240.1| OmpA family protein [Chlorobium luteolum DSM 273]
gi|78167099|gb|ABB24197.1| OmpA family protein [Chlorobium luteolum DSM 273]
Length = 229
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSND---TDIVNKRFG----------------- 44
L + T GC SR + + + I+ R G
Sbjct: 13 FILILATATMTWGCESTSRTGRGAGIGATAGGVLGGIIGSRSGSWVKGALIGAAVGGAAG 72
Query: 45 ----SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ +DK E + G V R+G+ I + F + ++ +
Sbjct: 73 ALIGNYMDKQAAEIDRDV--DGARVERVGESIRVVFDSGILFTTGSATITSTSRYNIEKL 130
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A ILN++P T + I+ HTDSIG+ N L+S+ RA+ + + L++ S+ +S G+
Sbjct: 131 ARILNRYPDTNMVIEGHTDSIGSETQNQLLSERRAESV-ATLLKTYGVSSSRLSPVGYGE 189
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P+ +N+T+ GR+ N+R+E+ I+ ++K
Sbjct: 190 TRPVASNETETGRRQNRRVEVLIYANDDLK 219
>gi|118578992|ref|YP_900242.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118501702|gb|ABK98184.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 224
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+V G+ +D+ + + + V R G+ + +P + F + L+
Sbjct: 66 SGAVVGGGIGNYMDRQAAALKKNMPE--AEVVRDGENVYVALPSGILFDTGKDELKTSAK 123
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L A L T I IQ HTDS G+ K N +SQ RA+ ++ +L GV S+R +
Sbjct: 124 ESLAKAAATLKS-SETNIIIQGHTDSTGSDKINQPLSQRRANQVRDFLAANGVPSSRM-T 181
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
G+ P NDT+V R N+R++++I P IK
Sbjct: 182 AIGYGSSRPAVPNDTEVNRALNRRVQLEISPNEKIK 217
>gi|149372847|ref|ZP_01891868.1| OmpA family protein [unidentified eubacterium SCB49]
gi|149354544|gb|EDM43109.1| OmpA family protein [unidentified eubacterium SCB49]
Length = 235
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 43/225 (19%), Positives = 80/225 (35%), Gaps = 38/225 (16%)
Query: 1 MIKELGLSMFIMTT---ISGCGLASREKKKV----------------------------- 28
+IK +G+ M ++ C K
Sbjct: 4 IIKNIGVIAMAMVLTVNLTSCEATQNANNKQKGAVIGAGAGAVLGAILGNNVGKGGNGEL 63
Query: 29 -FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH---VSFVS 84
+ G+ +DK E + ++ G V R+ D I + +
Sbjct: 64 GAVLGGVVGGTAGVLIGNKMDKQAQEIESEIP--GAEVERVDDGIVITFDENSGVYFDTA 121
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ + L +A +L ++ T + + HTDS+G+ +N+L+SQ RA + +Y
Sbjct: 122 KYNINTASQQNLDKLAGVLQEYVDTNVLVVGHTDSVGSEDSNMLLSQRRAQAVTNYFTST 181
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
S+ + + + P+ N T GR N+R+ I I P +K
Sbjct: 182 KGLSSSRFTTNWYGEQTPVGDNATPEGRAQNRRVNIVIVPNEKMK 226
>gi|149277257|ref|ZP_01883399.1| lipoprotein PG3 [Pedobacter sp. BAL39]
gi|149232134|gb|EDM37511.1| lipoprotein PG3 [Pedobacter sp. BAL39]
Length = 226
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + + + G +DK E Q + + V R G+ I
Sbjct: 50 GKKAGNTAVGAIIGAAVGGTAGGFIGKRMDKQAAEIQNAIPN--AEVIREGEGIIVKFDS 107
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ F + L + ++ +A LN++P T I + HTD+ GT N+ +S+ RA +
Sbjct: 108 GILFGFDKADLTAQAKTNVKSLAGSLNQYPGTDIKVIGHTDNKGTETYNMGLSERRAAAV 167
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
K+Y + +GV S+R I+V G + PID N T+ GR N+R+E+ I +KK
Sbjct: 168 KAYAVSQGVPSSRLITV-GKGFSEPIDDNSTEAGRAANRRVEVVIVANDQLKK 219
>gi|330502404|ref|YP_004379273.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328916690|gb|AEB57521.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 217
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 8/191 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ I+GC EKK+V + V + + LD+ E + + ++
Sbjct: 1 MRANKIIAFTCCLLIAGCA--GSEKKEVAKPAAMPAPQVTRAW---LDEYEPKLREAVKG 55
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ R +++ PV SF + L L + +A +L + + H D
Sbjct: 56 SQFEFERRENLLVVTAPVQGSFNPDRPHMLLPASLGPITRVAKLLETDEDIAVVVLGHAD 115
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S G N +SQ+RA + S G+ +R + V G P ND+ GR N+R+
Sbjct: 116 SSGDAALNRDLSQQRARAVTSIFRLSGLKQSR-LQVMGLGSDMPRAANDSAAGRALNRRV 174
Query: 179 EIQIFPRGNIK 189
EI + R ++
Sbjct: 175 EILLTSRDTMQ 185
>gi|237806321|ref|ZP_04593025.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331027434|gb|EGI07489.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 194
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 2/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + + +G DK E + + +TG+ V R GD I +P +++F
Sbjct: 27 NHRGKGALIGAAVAGAASAGYGYYADKQEAALRESMANTGVEVQRQGDQIKLIMPGNITF 86
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L +A+ L +F I I +TDS G+ ++N+ +SQ+RA + +YL
Sbjct: 87 ATDSSAIASSFYSPLNNLASSLKQFNQNNIEIVGYTDSTGSRQHNMDLSQQRAQSVATYL 146
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +SVRG PI +N GR N+R+E+ + P
Sbjct: 147 TSQ-GVDQTHLSVRGAGPDQPIASNADVNGRAQNRRVEVNLKP 188
>gi|284040434|ref|YP_003390364.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283819727|gb|ADB41565.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 537
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
G+++D + + Q+ D + + I + + L + P L + T
Sbjct: 395 AEGANIDLTQPKGYQQITDQQLKLIPIEVGSVVRLNNIFFDTGKSELRPESGPELDRLVT 454
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
LN P I ++ HTD+ G+ + N +SQ+RAD ++ Y I + I+ +GF
Sbjct: 455 TLNDAPKMTIEVRGHTDNTGSNEINAKLSQDRADAVREYFISK-GIEPDRIASKGFGEAK 513
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
P +N+T+ GRQ N+R+E I +
Sbjct: 514 PTASNNTEEGRQQNRRVEFVIVKK 537
>gi|224370810|ref|YP_002604974.1| OmpF [Desulfobacterium autotrophicum HRM2]
gi|223693527|gb|ACN16810.1| OmpF [Desulfobacterium autotrophicum HRM2]
Length = 213
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 38/216 (17%)
Query: 1 MIKELGLSMFIM--TTISGCGLASREK---KKVFLHKSNDTDIVNKR------------- 42
M K +++ ++ C + ++ K+ + + I+ +
Sbjct: 1 MKKFTAIAVIAAVPLVMASCAGMTNQESRTKEGVIVGAGLGAILGQAIGGDTEGTLIGAG 60
Query: 43 ------------FGSSLDKAEDEFQMQLQ-DTGIVVSRIGDMITCYIPVHVSF-VSEVFL 88
G+ +D+ E + + + R +++T + F L
Sbjct: 61 LGAAIGGVAGNQIGAYMDRQEQALRSAVATSEAASIQRSQNVLTATFKANTFFDFDSSTL 120
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ L +A +L FP T I ++ HTDS GT + N+L+SQ RA + L+QRGV
Sbjct: 121 KPGAYSELDRVAKVLRDFPQTRIRVEGHTDSKGTDQYNMLLSQRRAQAVTDALVQRGVDP 180
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R S+ GF P+ +ND N+R+ I I P
Sbjct: 181 MRMESI-GFGESQPVSSNDGD-----NRRVNIVIIP 210
>gi|313201307|ref|YP_004039965.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
gi|312440623|gb|ADQ84729.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
Length = 222
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 82/212 (38%), Gaps = 32/212 (15%)
Query: 2 IKE--LGLSMFIMTTISGCGLASREKK---------------------------KVFLHK 32
+K + S+ + T+SGC + +K
Sbjct: 1 MKSPLITSSLLLALTMSGCANMTETQKGTAKGAGIGAGVGAVVGALAGGSKGAAIGAAVG 60
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEK 90
+ I + +++ + + + TG+ VS+ + + IP + + ++
Sbjct: 61 AGAGAIGGNVWSRRMEEQKQQMEQATAGTGVQVSQTADNRLKLDIPSDISFDSGKSDIKP 120
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
F P+L A L P+T + I HTD+ GT N +S RA+ + YL+ R ++
Sbjct: 121 NFRPVLDSFAQSLVANPATKVTIVGHTDNTGTDAVNNPLSLNRANHARDYLVTR-GVASS 179
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G P+ N++ R N+R+EI +
Sbjct: 180 RFTTEGRGSHEPLVENNSDANRAKNRRVEIFV 211
>gi|288927544|ref|ZP_06421391.1| lipoprotein PG3 [Prevotella sp. oral taxon 317 str. F0108]
gi|288330378|gb|EFC68962.1| lipoprotein PG3 [Prevotella sp. oral taxon 317 str. F0108]
Length = 225
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 72/209 (34%), Gaps = 27/209 (12%)
Query: 1 MIK-ELGLSMFIMTTISGCGLAS----------------------REKKKVFLHKSNDTD 37
M K ++ + + + GC + +
Sbjct: 1 MKKMKVLTLLMCLVLVFGCKTKQGTGTLIGTGGGALLGAVIGKVAGNTAVGAVVGATVGA 60
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSF-VSEVFLEKKFL 93
G +DK Q+++ + + + + F ++ L +
Sbjct: 61 ATGSMIGKHMDKVAKRTAEQVKNAKVEEVTDANGLKAVKVTFDSGILFATNKATLNQSSK 120
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L + +L + + I HTD+ G N+ +S RA + +YL GV ++F
Sbjct: 121 NELAKFSQVLKENRDCHVDIYGHTDNTGNDGINIPLSNSRAQSVVNYLANCGVPRSQFQK 180
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V G P+ +N T GRQ N+R+E+ +
Sbjct: 181 VEGKGSSDPVASNSTASGRQQNRRVEVYL 209
>gi|255319913|ref|ZP_05361114.1| inner membrane lipoprotein YiaD [Acinetobacter radioresistens SK82]
gi|262379192|ref|ZP_06072348.1| type VI secretion system OmpA/MotB [Acinetobacter radioresistens
SH164]
gi|255303046|gb|EET82262.1| inner membrane lipoprotein YiaD [Acinetobacter radioresistens SK82]
gi|262298649|gb|EEY86562.1| type VI secretion system OmpA/MotB [Acinetobacter radioresistens
SH164]
Length = 209
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 32/209 (15%)
Query: 2 IKELGLS-MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF----------------- 43
++ L +S + +SGC +K + +
Sbjct: 1 MRALMISTVVGAMALSGCQNMEYDK---AAIGTGLGALAGYGISKSNANSSAQNNRAAAI 57
Query: 44 --------GSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFV-SEVFLEKKFL 93
G LD E + + Q+ TG+ V+R D + +P +++F ++ ++ F
Sbjct: 58 GAVVGAATGVYLDNKEKKLRQQMAGTGVEVNRNPDGSVGLIMPGNITFDTNKSTIKPNFY 117
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L +A L + + I + +TDS G N+ +SQ RA + +YL +GV R I+
Sbjct: 118 TTLNKVAQTLTEDNKSAILVTGYTDSTGNDSINIPLSQARAQAVANYLAGQGVPRTR-IN 176
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+G PI +N T GR+ N+R+EI I
Sbjct: 177 AQGLGASNPIASNATAEGREQNRRVEISI 205
>gi|45600818|gb|AAS70302.1| motility protein B [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
Length = 266
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
R ++ E++ +++ I + R D + I + L+K+ LP L I
Sbjct: 117 DRLSDQANELENKLTDEIKKGQIRLKRFHDRLVINIDDKISFDSGSADLKKQILPALDKI 176
Query: 100 ATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
IL +P +I I+ HTD++ +N +S ERA + Y ++ + R S+
Sbjct: 177 KEILGNYPGNLIIIEGHTDNVPIRTKKFSDNWQLSGERALSVLHYFLESKILDPRNFSLA 236
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G+ PI +NDT R N+R++I + PR
Sbjct: 237 GYGEFQPIVSNDTPENRALNRRVDIVVVPR 266
>gi|116328262|ref|YP_797982.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116121006|gb|ABJ79049.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 340
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
R ++ E++ +++ I + R + + I + L+K+ LP L I
Sbjct: 191 DRLADQANELENKLGDEIKKGQIRLKRFHNRLVINIDDRISFDSGSAELKKQILPALDKI 250
Query: 100 ATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
IL +P +I I+ HTD++ +N +S ERA + Y ++ + R S+
Sbjct: 251 KEILGNYPGNLIIIEGHTDNVPIRTRKFSDNWQLSGERALSVLHYFLESKILDPRNFSLA 310
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G+ PI +NDT R N+R++I + PR
Sbjct: 311 GYGEFQPIVSNDTPENRALNRRVDIVVVPR 340
>gi|116330986|ref|YP_800704.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116124675|gb|ABJ75946.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 340
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
R ++ E++ +++ I + R + + I + L+K+ LP L I
Sbjct: 191 DRLADQANELENKLGDEIKKGQIRLKRFHNRLVINIDDRISFDSGSAELKKQILPALDKI 250
Query: 100 ATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
IL +P +I I+ HTD++ +N +S ERA + Y ++ + R S+
Sbjct: 251 KEILGNYPGNLIIIEGHTDNVPIRTRKFSDNWQLSGERALSVLHYFLESKILDPRNFSLA 310
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G+ PI +NDT R N+R++I + PR
Sbjct: 311 GYGEFQPIVSNDTPENRALNRRVDIVVVPR 340
>gi|237740757|ref|ZP_04571238.1| outer membrane porin F [Fusobacterium sp. 2_1_31]
gi|229422774|gb|EEO37821.1| outer membrane porin F [Fusobacterium sp. 2_1_31]
Length = 173
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 6/178 (3%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
+ + C K S + + + +S ED G+ + R G
Sbjct: 1 MLALLATACSSKKVIKNTGVGVDSANKYAI-EDTEASKKPLEDII--VFDQEGVTIRREG 57
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + +P + F + ++ P L +A L + I I +TD IGT NL
Sbjct: 58 NNLILSMPELILFDFDKYAVKDGIKPSLATLAKALGENKDIHIKIDGYTDFIGTEAYNLE 117
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S +RA IK +LI +G + IS+ G+ + P DTN T+ GR N+R+E I RG
Sbjct: 118 LSVKRARAIKDFLISKGAIGSN-ISIEGYGEQNPADTNKTEAGRSRNRRVEF-IISRG 173
>gi|91776019|ref|YP_545775.1| OmpA/MotB [Methylobacillus flagellatus KT]
gi|91710006|gb|ABE49934.1| OmpA/MotB [Methylobacillus flagellatus KT]
Length = 214
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 1 MIKELGLSMFIM-TTISGCGLASREKKKVFLHKSNDTDIVN------------------- 40
M + ++ I +SGC S +K + +
Sbjct: 1 MKTNITITTLIATLAMSGCANMSGTQKGAAIGAGAGAVVGAIAGKGKGAAIGAAVGAGAG 60
Query: 41 ----KRFGSSLDKAEDEFQMQLQDTGIVVSR-IGDMITCYIPVHVSF-VSEVFLEKKFLP 94
+ +++ + + + +DTG+ VS+ + + IP +SF + +E F
Sbjct: 61 ALAGNVWSKRMEEQKRQMEEATKDTGVEVSQTEDNQLKLSIPSDISFASGKADIEPNFRV 120
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+L AT L P+T++ I HTD+ G+ N +S RA + YLI RG++++R ++
Sbjct: 121 VLDNFATTLKNNPNTLVTIIGHTDNTGSDAINNPLSVNRAANTRDYLIARGIAASR-FTI 179
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G + P+ +NDT R N+R+EI +
Sbjct: 180 DGRGSREPLVSNDTPANRAKNRRVEIFV 207
>gi|302389670|ref|YP_003825491.1| OmpA/MotB domain protein [Thermosediminibacter oceani DSM 16646]
gi|302200298|gb|ADL07868.1| OmpA/MotB domain protein [Thermosediminibacter oceani DSM 16646]
Length = 248
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 9/163 (5%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT---GIVVSRIGDMITCY-IPVHVSFVSE 85
+ ++ + E+ FQ + + GI V R + I + +
Sbjct: 78 EGDALGGNLSGAGERREFENLENTFQEIINENNLKGIRVEREERGLAIRFIEGALFDSGK 137
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYL 141
+L + +L IA IL K I ++ HTD++ + N +S RA + Y
Sbjct: 138 AYLREDARQVLDKIAPILKKI-QRPIRVEGHTDNVPIHNSEFPSNWELSTTRAVNVVRYF 196
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I++ S IS G+ +PI ND++ R N+R++I I
Sbjct: 197 IEKHNISPHMISAAGYGEYHPIAPNDSEKNRALNRRVDIIILN 239
>gi|325983492|ref|YP_004295894.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
gi|325533011|gb|ADZ27732.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
Length = 227
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 83/213 (38%), Gaps = 32/213 (15%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSND------------------------ 35
+K L + + ++ T++GC + ++ +
Sbjct: 1 MKTLSILIVQALILTLTGCTTMTDTQRGTAQGTAIGAGTGAAIGALIGGKKGAAIGAGSG 60
Query: 36 ---TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR-IGDMITCYIPVHV-SFVSEVFLEK 90
+ +++ + E + TG+ V++ + + IP + ++
Sbjct: 61 ALLGAGAGYMWSQRMEEQKREMETATAGTGVQVTQTEDNRLKLNIPSDISFDTGRADIKP 120
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
F P+L AT L T + I HTDS G+ N +S RA + YL+ RGVS R
Sbjct: 121 GFRPILDNFATTLISNEGTAVKIIGHTDSTGSDAINNPLSVNRAASTRDYLVSRGVSIKR 180
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
I + G + P+ NDT R N+R+EI +
Sbjct: 181 -IQIDGRGSREPMAENDTPENRAENRRVEIFVT 212
>gi|284035694|ref|YP_003385624.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283814987|gb|ADB36825.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 236
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 2 IKELGLSMFIMTT----ISGCGLAS--REKKKVFLHKSNDTDIVNKRFGS---------- 45
K L + M ++ C + + ++ + ++ ++ G+
Sbjct: 10 KKSLAVLMAAGILSGNVLTSCKSSKRLNQTQQGGVIGASSGAVIGGIIGNKTGNTALGAI 69
Query: 46 ---------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLE 89
+DK +E + Q+ + V R+G+ I + + F L+
Sbjct: 70 LGATVGGAAGAVIGRRMDKQAEEIKRQMPN--AQVERVGEGIKVSLGSDILFDVDSYALK 127
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ L A LNK+ T + I+ H D+ G+ +NL +S++RA + S+L +GV ++
Sbjct: 128 PETKQQLIEFAKSLNKYEDTDVRIEGHADATGSDSHNLELSKQRAKAVGSFLESQGVKTS 187
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
R + G+ P+ N T+ GR+ N+R+++ +F +++
Sbjct: 188 RVDEI-GYGEAQPVADNSTEAGRRKNRRVDVAVFANKQLQR 227
>gi|83746716|ref|ZP_00943765.1| Hypothetical Protein RRSL_03628 [Ralstonia solanacearum UW551]
gi|207721381|ref|YP_002251822.1| bacterial outer membrane protein [Ralstonia solanacearum MolK2]
gi|207742640|ref|YP_002259032.1| bacterial outer membrane protein [Ralstonia solanacearum IPO1609]
gi|83726669|gb|EAP73798.1| Hypothetical Protein RRSL_03628 [Ralstonia solanacearum UW551]
gi|206586540|emb|CAQ17127.1| bacterial outer membrane protein [Ralstonia solanacearum MolK2]
gi|206594034|emb|CAQ60961.1| bacterial outer membrane protein [Ralstonia solanacearum IPO1609]
Length = 209
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 75/207 (36%), Gaps = 24/207 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKK---------------------KVFLHKSNDTDIV 39
M +L I +GC + + K
Sbjct: 1 MKAKLISVSLIALLAAGCATQQQNQTLAGTGVGAAVGAGIGALVGNSKGAAIGGALGAAG 60
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFLPMLQ 97
G + + + + TG +S D + IP V ++ F L
Sbjct: 61 GAAVGYNWNAIKSKLTGDTAGTGTQISEQPDGSLKLNIPSQVSFDTDSAMIKPSFRGPLD 120
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A L + P ++ HTDS G N+ +SQ RA + SYL RGV+ NR ++ G
Sbjct: 121 SVAETLTQHPELAASVVGHTDSTGNPNYNMSLSQRRAQSVTSYLTDRGVARNR-LTAEGR 179
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ N T+ GR N+R+EI + P
Sbjct: 180 GQTQPVGDNATEAGRAQNRRVEIYLKP 206
>gi|255037862|ref|YP_003088483.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254950618|gb|ACT95318.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 525
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ + +++ ++ + + + I + + + L ++ P L
Sbjct: 379 AEGENIDLTDSTGKEKSFKEIANKSLKLIPIEEGQIVRLNNIFFATGKATLREESFPELN 438
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IA + + + I + HTD+ G+ + N+ +SQERAD ++ YLI + I+ +G+
Sbjct: 439 RIAISMTENKTLAIELGGHTDNTGSAEFNVNLSQERADTVREYLIGK-GIEPDRIASKGY 497
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
P+ TNDT G+Q N+R+E +I +
Sbjct: 498 GETKPVATNDTPEGQQQNRRVEFKILKK 525
>gi|226946149|ref|YP_002801222.1| OmpA family protein [Azotobacter vinelandii DJ]
gi|226721076|gb|ACO80247.1| OmpA family protein [Azotobacter vinelandii DJ]
Length = 222
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + +G DK E + + Q+ TG+ V R G+ I +P +++F
Sbjct: 51 DNRGKGALIGAAVGGAAGAGYGYYADKQEAQLRQQMAGTGVEVQRQGNDIKLIMPGNITF 110
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ F L +A ++ I + HTDS G+ + N+ +SQ RA + +YL
Sbjct: 111 ATGSAEIASNFYTPLNDLANSFKQYDQNSIEVIGHTDSTGSYQTNMSLSQRRAQSVANYL 170
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +GV+ R ++ RG P+ +N T+ GR N+R+EI + P
Sbjct: 171 VAQGVNGAR-VTTRGAGPDSPVASNATESGRSQNRRVEINLRP 212
>gi|253999219|ref|YP_003051282.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4]
gi|253985898|gb|ACT50755.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4]
Length = 222
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 82/212 (38%), Gaps = 32/212 (15%)
Query: 2 IKE--LGLSMFIMTTISGCGLASREKK---------------------------KVFLHK 32
+K + S+ + T+SGC + +K
Sbjct: 1 MKSPLITSSLLLALTMSGCANMTETQKGTAKGAGIGAGVGAVVGALAGGSKGAAIGAAVG 60
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEK 90
+ I + +++ + + + TG+ VS+ + + IP + + ++
Sbjct: 61 AGAGAIGGNVWSRRMEEQKQQMEQATAGTGVQVSQTADNRLKLDIPSDISFDSGKSDIKP 120
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
F P+L A L P+T + I HTD+ GT N +S RA+ + YL+ R ++
Sbjct: 121 NFRPVLDSFAQSLVANPATRVTIVGHTDNTGTDAVNNPLSLNRANHARDYLVTR-GVASS 179
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G P+ N++ R N+R+EI +
Sbjct: 180 RFTTEGRGSHEPLVENNSDANRAKNRRVEIFV 211
>gi|312127873|ref|YP_003992747.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777892|gb|ADQ07378.1| OmpA/MotB domain protein [Caldicellulosiruptor hydrothermalis 108]
Length = 257
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 7/171 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF---QMQLQDTGIVVSRIGDMITCYI 76
K + D + + + ++V + ++ +
Sbjct: 76 SGKNVKGTNTDVGGTTKNKQMTEEELINDIQKQVLGLIKEHGIEGKVLVIQEERGLSILL 135
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN----LLISQE 132
+ L + ++ IA IL K P+ I I+ HTD++ +S
Sbjct: 136 KDVLFDTGSAKLTPQAKGVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTA 195
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + +++ SV G+ PI +N T GR N+R+ I I
Sbjct: 196 RATSVLQEILRVSKVRPERFSVVGYGEYRPIASNKTPEGRALNRRVTIVIL 246
>gi|86131069|ref|ZP_01049668.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85818480|gb|EAQ39640.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 470
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 41/191 (21%), Positives = 78/191 (40%), Gaps = 14/191 (7%)
Query: 8 SMFIMTTISGCGLASREKKKVFLH------------KSNDTDIVNKRFGSSLDKAEDEFQ 55
++ + + GC A + K D D+ D
Sbjct: 281 TVAGIAALGGCPDADGDGIKDADDNCPNEAGPRANNGCPYQDKDGDGVLDKDDECPDVAG 340
Query: 56 MQLQDTGIVVSRIG-DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ VS + + + ++ + + L +A+++ ++P+T I+
Sbjct: 341 TVANNGCPEVSVEVLNDLNVETKKVLFDYNKASIRTESYATLDKVASVMMEYPTTRFLIE 400
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD G NL +S +RA ++SYL +G+ ++R S +GF P+ +N T GRQ
Sbjct: 401 GHTDDRGRDAYNLDLSDQRAASVRSYLTGKGIPASRLES-KGFGEARPVASNKTAAGRQE 459
Query: 175 NQRIEIQIFPR 185
N+R+E+ I +
Sbjct: 460 NRRVELSILEQ 470
>gi|332664439|ref|YP_004447227.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332333253|gb|AEE50354.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 228
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 3/165 (1%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ K L + I GS +DK + + L V R+G+ I
Sbjct: 52 AKGSDNAKGILIGATVGGIAGAIIGSYMDKHARKLKEDL-GKSAEVERVGESILVTFDSG 110
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ F L+ L A + ++ T I + HTD+ G+ + N +S+ RA +
Sbjct: 111 IMFDVDSYALKAATRANLDKAAETMKEYDKTEIIVMGHTDATGSDEYNQKLSENRAAAVS 170
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S +Q+ + ++ +GF + P+ +N + GR+ N+R+EI I
Sbjct: 171 S-FLQQNGVTASRLTKKGFGEQKPVASNTSVSGREQNRRVEIAIV 214
>gi|332291754|ref|YP_004430363.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332169840|gb|AEE19095.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 471
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 20/194 (10%)
Query: 8 SMFIMTTISGCGLASREKKKVFLH----------------KSNDTDIVNKRFGSSLDKAE 51
++ + + GC A + K + D D V + D A
Sbjct: 282 TVAGVAALGGCPDADGDGIKDADDACPNEAGPRSNNGCPFEDKDGDGVLDKDDECPDVAG 341
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ + V + + + ++ + + L +A+++ ++P+T
Sbjct: 342 TVANNGCPEVSVEVL---NELNLETKKVLFDYNKASIRTESYATLDKVASVMMEYPTTRF 398
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I+ HTD G NL +S +RA ++SYL +G+ + R S +GF P+ +N T G
Sbjct: 399 LIEGHTDDRGRDAYNLDLSDQRAASVRSYLTGKGIPAARLES-KGFGEARPVASNKTAAG 457
Query: 172 RQNNQRIEIQIFPR 185
RQ N+R+E+ I +
Sbjct: 458 RQENRRVELSILEQ 471
>gi|260062849|ref|YP_003195929.1| OmpA family protein [Robiginitalea biformata HTCC2501]
gi|88784417|gb|EAR15587.1| OmpA family protein [Robiginitalea biformata HTCC2501]
Length = 231
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 85/212 (40%), Gaps = 31/212 (14%)
Query: 9 MFIMTTISGCGLA--SREKKKVFLHKSNDTDIVNKRFGS--------------------- 45
M I+ + GC + K+K + ++ ++ G+
Sbjct: 12 MLILGLVFGCNTVKNANNKQKGAVIGASSGAVIGGVVGNNVGKGNTVLGAIIGGVVGGVA 71
Query: 46 ------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQL 98
+D+ ++ + +L + G +T V F + +E + L
Sbjct: 72 GGYIGDRMDRQAEKIEEELPGAEVKRVGEGINVTFTQDQGVHFATNQSAIEGASVTTLNK 131
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A I ++P +VI ++ HTDS G N+ +SQ RA+ + +YL+ + +VR +
Sbjct: 132 LAGIFKEYPKSVILVEGHTDSAGPEDYNMSLSQRRAESVVNYLVAQ-GIDKDRFTVRWYG 190
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
P N T G+ N+R+E+ I +K+
Sbjct: 191 ETQPRADNSTAEGKAQNRRVEMGIIASEALKE 222
>gi|312134920|ref|YP_004002258.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
owensensis OL]
gi|311774971|gb|ADQ04458.1| OmpA/MotB domain protein [Caldicellulosiruptor owensensis OL]
Length = 257
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 59/173 (34%), Gaps = 5/173 (2%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+SG V N + + + + +V + ++
Sbjct: 75 LSG-KNVKGTNTDVGGTTKNRQMTEEELINDIQKQVLGLIKEHGIEGKALVIQEERGLSI 133
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN----LLIS 130
+ + L + ++ IA IL K P I I+ HTD++ +S
Sbjct: 134 LLKDVLFNTGSAKLTPQAKEVVHEIAKILEKVPDNNIRIEGHTDNVPIHNKYFYSNWELS 193
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + +++ SV G+ PI +N T GR N+R+ I I
Sbjct: 194 TARATSVLQEILRVSKVRPERFSVVGYGEYRPIASNKTPEGRALNRRVTIVIL 246
>gi|300703368|ref|YP_003744970.1| outer membrane lipoprotein [Ralstonia solanacearum CFBP2957]
gi|299071031|emb|CBJ42340.1| putative outer membrane lipoprotein [Ralstonia solanacearum
CFBP2957]
Length = 209
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 74/207 (35%), Gaps = 24/207 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKK---------------------KVFLHKSNDTDIV 39
M +L I +GC + + K
Sbjct: 1 MKAKLISVSLIALLAAGCATQQQNQTLAGTGVGAAVGAGIGALVGNSKGAAIGGALGAAG 60
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFLPMLQ 97
G + + + + TG +S D + IP V ++ F L
Sbjct: 61 GAAVGYNWNAIKSKLTGDTAGTGTQISEQPDGSLKLNIPSQVSFDTDSAMIKPSFRGPLD 120
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A L + P ++ HTDS G N+ +SQ RA + SYL RGV+ R ++ G
Sbjct: 121 SVAETLTQHPELAASVVGHTDSTGNPNYNMSLSQRRAQSVTSYLTDRGVARTR-LTAEGR 179
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ N T+ GR N+R+EI + P
Sbjct: 180 GQTQPVGDNATEAGRAQNRRVEIYLKP 206
>gi|86130189|ref|ZP_01048789.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85818864|gb|EAQ40023.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 236
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 93/226 (41%), Gaps = 39/226 (17%)
Query: 1 MIKELGLSMFIMTTISG---CGLA--SREKKKVFLHKSNDTDIVNKRFG----------- 44
+++ + + ++G C + K+K + + I+ G
Sbjct: 4 ILRNITVVALGAAMLTGFTSCEATKNANNKQKGAVIGATGGAILGAIIGNNAGSGGNGEL 63
Query: 45 -----------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH---VSFVS 84
+ +DK + + ++ G V R+ D I + +
Sbjct: 64 GAVIGGVVGGGAGVLIGNKMDKQAQQIEQEIP--GASVERVDDGIVVTFDENSGVYFDTA 121
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ + ML ++ I+ ++ T + + HTDS+G+ +NL +SQ RA+ + +Y+I
Sbjct: 122 KYNINANSQTMLNKLSNIMKEYNQTNVIVAGHTDSVGSDASNLTLSQNRANAVTNYMIGT 181
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
G+S+ R + + P +NDT GR N+R+++ I P +K+
Sbjct: 182 GLSAGR-FTTVWYGEAQPAASNDTAEGRAQNRRVQLAIVPNEQMKE 226
>gi|300113303|ref|YP_003759878.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113]
gi|299539240|gb|ADJ27557.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113]
Length = 283
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 65/165 (39%), Gaps = 10/165 (6%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C ++ D LD+ D G+ V +G +
Sbjct: 125 CPDTP--PGVAVNNEGCPVDSDGDGVPDDLDECPD------TAHGVSVDEVGCPKPVVLQ 176
Query: 78 VHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V F L +L +A + P+ + I +TDSIG N+ +S+ RA+
Sbjct: 177 SGVHFGFDSAKLSPNAHTILDKVAEKMRAHPNLKVTITGYTDSIGNADYNMRLSKLRAEA 236
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
YL G+ +R +V G + P+ +N TK GR N+R+E+Q
Sbjct: 237 AMDYLSSEGIDPSRMEAV-GRGEERPVASNSTKEGRAKNRRVELQ 280
>gi|319796493|ref|YP_004158133.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315598956|gb|ADU40022.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 219
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 46/217 (21%), Positives = 82/217 (37%), Gaps = 32/217 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVF----------------LHKSNDTDIVNKR-- 42
M K + + +SGC + ++ N I
Sbjct: 1 MKKFVLATCATAIVLSGCAGGMTDTQRNTGIGAGIGALGGAAIGSATGGNRGAIGTGAVV 60
Query: 43 -----------FGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFV-SEVFLE 89
+ ++ + + + Q TG+ V++ + + IP VSF ++
Sbjct: 61 GAAAGALGGYLWSQRMENQKRQMEAATQGTGVAVTQTQNNELKLAIPSDVSFDVGRANIK 120
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
F P+L A+ L P+ + I HTDS G+ N +S +RA + YL+ R +
Sbjct: 121 PNFAPVLDQFASGLRNNPNAEVRIIGHTDSTGSDAINNPLSVDRAASTRDYLVAR-GVNA 179
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ G P+ N++ GR N+R+EI + RG
Sbjct: 180 AAFRIEGRGSHEPVADNNSDAGRAQNRRVEIYVGERG 216
>gi|295134535|ref|YP_003585211.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda
SM-A87]
gi|294982550|gb|ADF53015.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda
SM-A87]
Length = 232
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 78/224 (34%), Gaps = 35/224 (15%)
Query: 1 MIKE----LGLSMFIMTTISGCGLASREKKKVFL------------------HKSNDTDI 38
M+K+ + F + + C K ++ +
Sbjct: 1 MMKKTINKIVAVFFAASVLVSCDAIQNANNKQKGAVIGSAGGAAIGGVIGNNTGDGNSAL 60
Query: 39 VNKR-----------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EV 86
G+ +DK + + ++ + G +T V F + +
Sbjct: 61 GAIIGGVVGGAAGAYIGNRMDKQAKKIETEVPGAEVERVGEGINVTFDENSGVYFATEKY 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ K L +A I ++P T I ++ HTD+ G+ NL +S+ RA + + +
Sbjct: 121 NINAKSEETLNKLANIFKEYPDTNILVEGHTDNTGSESYNLTLSKNRAQAVTN-FLTDHG 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + + P N T GR N+R+EI I ++K+
Sbjct: 180 IAASRFDTKWYGEAQPKYDNSTAEGRSKNRRVEIAIVANEDLKQ 223
>gi|194336698|ref|YP_002018492.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
gi|194309175|gb|ACF43875.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 229
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 29/211 (13%)
Query: 6 GLSMFIMTTIS-GCGLASREK------------------------KKVFLHKSNDTDIVN 40
L + MTT++ GC + K + +
Sbjct: 13 FLLILAMTTVTWGCQTTTNAGQGAGIGAAAGGVIGGIIGSRSGSWAKGAIIGAVLGGAGG 72
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLI 99
G+ +DK E + G V R+G+ I + F + ++ +
Sbjct: 73 ALIGNYMDKQAAEIDHDV--EGARVERVGEGIRVIFDSGILFSTGSATITSTSRYNIEKL 130
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A ILN++ T + I+ HTDSIG+ N +S+ RAD + + L++ S R +S G+
Sbjct: 131 ARILNRYNETSLVIEGHTDSIGSDDANQSLSERRADSVAN-LLEAYRVSGRRLSPIGYGE 189
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
P+ +N+T+ GR+ N+R+E+ I+ ++K+
Sbjct: 190 TRPVSSNETEYGRKLNRRVEVLIYANDDLKR 220
>gi|82701882|ref|YP_411448.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
gi|82409947|gb|ABB74056.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
Length = 225
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 47/216 (21%), Positives = 78/216 (36%), Gaps = 35/216 (16%)
Query: 1 MIKEL-GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN------------------- 40
M K+L +S+ + + GC + + + I
Sbjct: 1 MRKQLSVISITTVLALGGCASSPETQSTRTRDTAIGAGIGAGTGALIGAIAGKGKGAAIG 60
Query: 41 ------------KRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEV 86
+ +++ + E + TG+ V + + + IP +
Sbjct: 61 AAAGAGLGAIAGNVWSRRMEEQKREMEQATAGTGVEVVKTSDNRLRLDIPSDISFDTGRA 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ F P+L AT LN P T + I HTDS G+ N +S RA + YL R
Sbjct: 121 DIRPNFRPVLDSFATSLNNNPITEVTIIGHTDSSGSDAVNNPLSLNRAASTRDYLASR-G 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S + + G + PI NDT R N+R+EI +
Sbjct: 180 VSPNRVRIEGRGSREPIVANDTPQNRARNRRVEIYV 215
>gi|149191103|ref|ZP_01869362.1| flagellar motor protein MotB [Vibrio shilonii AK1]
gi|148835031|gb|EDL52009.1| flagellar motor protein MotB [Vibrio shilonii AK1]
Length = 294
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 6/174 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
++G A R +K S ++ N+ + + Q +++ + V +G +
Sbjct: 107 MTGGQTADRTQKNQIGTASAQSEQENEDLDKLEEIIKKALQQEIKQGAVEVDNLGQQLVI 166
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLI 129
I +F FL+ KF P+++ +A ++ P + + HTD++ ++N +
Sbjct: 167 RIQEKGAFPEGSAFLQPKFRPLVRQVADLVKDIPG-QVRVSGHTDNLPLDSELYRSNWDL 225
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S +RA + + + S++ + V G A P+ NDT+ R N+R+EI I
Sbjct: 226 SSQRAVSVAQEMEKVKGFSHQRLRVLGVADTEPLGPNDTERQRARNRRVEISIM 279
>gi|300690749|ref|YP_003751744.1| outer membrane lipoprotein [Ralstonia solanacearum PSI07]
gi|299077809|emb|CBJ50447.1| putative outer membrane lipoprotein [Ralstonia solanacearum PSI07]
Length = 209
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 74/207 (35%), Gaps = 24/207 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKK---------------------KVFLHKSNDTDIV 39
M +L I +GC + + K
Sbjct: 1 MKAKLISVSLIALLAAGCATQQQNQTLAGTGVGAAVGAGIGALVGNSKGAAIGGALGAAG 60
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFLPMLQ 97
G + + + + TG +S D + IP V ++ F L
Sbjct: 61 GAAVGYNWNAIKSKLTGDTAGTGTQISEQPDGSLKLNIPSQVSFDTDSAVIKPSFRGPLD 120
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A L + P + HTDS G N+ +SQ RA + SYL RGV+ NR ++ G
Sbjct: 121 SVAETLTQHPELAANVVGHTDSTGNPNYNMSLSQRRAQSVTSYLTDRGVARNR-LTAEGR 179
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ N T+ GR N+R+EI + P
Sbjct: 180 GQTQPVGDNATEAGRSQNRRVEIYLKP 206
>gi|59711322|ref|YP_204098.1| flagellar motor protein MotB [Vibrio fischeri ES114]
gi|197335182|ref|YP_002155478.1| flagellar motor protein [Vibrio fischeri MJ11]
gi|59479423|gb|AAW85210.1| flagellar motor protein MotB1 [Vibrio fischeri ES114]
gi|197316672|gb|ACH66119.1| flagellar motor protein [Vibrio fischeri MJ11]
Length = 309
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 6/170 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + + +++++ + D + + ++ + I V +G + I
Sbjct: 126 GESPSNSTQTSAQSNSESESQTQSQQELEDTIKKALEREISEGAIEVENLGQQLVIRIRE 185
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQER 133
+F FL+ KF P+++ IA ++ P I + HTD+ ++N +S +R
Sbjct: 186 KGAFPAGSAFLQPKFRPLIRQIAELVKDVPGI-IRVSGHTDNQPLDSELYRSNWDLSAQR 244
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + + + VRG A P+ +N T GR N+R+EI I
Sbjct: 245 AVSVALEMERVKGFESDRLRVRGMASTEPLVSNKTAEGRARNRRVEISIM 294
>gi|292492509|ref|YP_003527948.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
gi|291581104|gb|ADE15561.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
Length = 243
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 39 VNKRFGSSLDKA---EDEFQMQLQDTGIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFL 93
G D+ E + + + + R+ D + IP V L++ FL
Sbjct: 75 TGSAVGYMNDQQREMEAALAEERRRHQLEIQRLQDESLKLDIPSEVSFDHDSASLKQAFL 134
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
P L IA +L K+ TV+ + HTDS G+ + NL +S RA + + +++ + +S
Sbjct: 135 PTLDKIADVLKKYNKTVVHVIGHTDSTGSEEYNLDLSVRRAANV-AVYLEQKGVPSPRLS 193
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ G P +NDT GRQ N+R+EI + P
Sbjct: 194 IYGEGESQPRASNDTAAGRQLNRRVEIILKP 224
>gi|17547099|ref|NP_520501.1| hypothetical protein RSc2380 [Ralstonia solanacearum GMI1000]
gi|17429400|emb|CAD16087.1| probable bacterial outer membrane transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 209
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 74/207 (35%), Gaps = 24/207 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKK---------------------KVFLHKSNDTDIV 39
M +L + +GC + + K
Sbjct: 1 MKAKLISVSLVALLAAGCATEQQNQTLAGTGVGAAVGAGIGALVGNSKGAAIGGALGAAG 60
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFLPMLQ 97
G + + + + TG +S D + IP V ++ F L
Sbjct: 61 GAAVGYNWNAIKSKLTGDTAGTGTQISEQPDGSLKLNIPSQVSFDTDSAVIKPSFRGPLD 120
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A L++ P + HTDS G N+ +SQ RA + SYL RGV+ NR S G
Sbjct: 121 SVAETLSQHPELAANVVGHTDSTGNPNYNMSLSQRRAQSVASYLTDRGVARNRM-SAEGR 179
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ N T+ GR N+R+EI + P
Sbjct: 180 GQTQPVGDNATEAGRAQNRRVEIYLKP 206
>gi|299066021|emb|CBJ37202.1| putative outer membrane lipoprotein [Ralstonia solanacearum CMR15]
Length = 209
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 73/207 (35%), Gaps = 24/207 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKK---------------------KVFLHKSNDTDIV 39
M +L + +GC + + K
Sbjct: 1 MKAKLISVSLVALLAAGCATQQQNQTLAGTGVGAAVGAGIGALVGNSKGAAIGGALGAAG 60
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFLPMLQ 97
G + + + TG +S D + IP V ++ F L
Sbjct: 61 GAAVGYNWGAIKSKLTGDTAGTGTQISEQPDGSLKLNIPSQVSFDTDSAVIKPSFRGPLD 120
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A L++ P + HTDS G N+ +SQ RA + SYL RGV+ R +S G
Sbjct: 121 SVAETLSQHPELAANVVGHTDSTGNPNYNMSLSQRRAQSVASYLTDRGVARTR-LSAEGR 179
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ N T+ GR N+R+EI + P
Sbjct: 180 GQTQPVGDNATEAGRAQNRRVEIYLKP 206
>gi|332293158|ref|YP_004431767.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332171244|gb|AEE20499.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 236
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 92/226 (40%), Gaps = 39/226 (17%)
Query: 1 MIKELGLSMFIMTTISG---CGLA--SREKKKVFLHKSNDTDIVNKRFG----------- 44
+++ + ++G C + K+K + + I+ G
Sbjct: 4 IVRNITAVALGAAMLTGFTSCEATKNANNKQKGAVIGATGGAILGAIIGNNAGKGGNGEL 63
Query: 45 -----------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH---VSFVS 84
+ +DK + + +L G V RI D I + +
Sbjct: 64 GAVIGGVVGGGAGVLIGNKMDKQAQQIEQELP--GATVERIDDGIVVTFDENSGVYFDTA 121
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ + +L ++ I+ ++ T + + HTDS+G+ NN+ +SQ RA+ + +Y++
Sbjct: 122 KYNVNTASQTLLNKLSNIMKEYNQTNVVVAGHTDSVGSDTNNMTLSQNRANAVTNYMVGT 181
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
G+S+ R + + P +NDT GR N+R+++ I P +K+
Sbjct: 182 GLSAGR-FTTVWYGETQPAASNDTAEGRAQNRRVQLAIVPNEEMKQ 226
>gi|206889281|ref|YP_002248656.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741219|gb|ACI20276.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 213
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 14/190 (7%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDI---VNKRFGSSLDKAED---EFQMQLQ 59
L++ ++ L+S + K S+ + +++ D+ + + + L
Sbjct: 25 FLTLLFTFFVALYALSSVDVTKAEKMTSSLRKVFKVIDEPVSFEEDRNKAIIEDLRKLLN 84
Query: 60 D-TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
D +GI + I +P + F L+ + L IA L + P +AI+ HT
Sbjct: 85 DISGINIKSDARGIVITLPDSLLFSSGSAELKPESTDALTRIAEKLKELPG-KVAIEGHT 143
Query: 118 DSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
D+I K+N +S RA + +L+QRG+S +RF+ + G+ P+ TNDT GR
Sbjct: 144 DNIPISSSVYKSNWELSAARASSVLHFLLQRGLSPDRFL-IAGYGEYKPVATNDTDEGRA 202
Query: 174 NNQRIEIQIF 183
N+R+E+ I
Sbjct: 203 KNRRVELIIL 212
>gi|307728928|ref|YP_003906152.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307583463|gb|ADN56861.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 217
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 77/205 (37%), Gaps = 24/205 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF----------------- 43
++ L + + ++GC V T
Sbjct: 5 LMTRLAVFAVAGSVLAGCASQQGTNTAVGTGVGAGTGAALGAIFGGGKGAAIGAGVGAAV 64
Query: 44 ----GSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVF-LEKKFLPMLQ 97
G + ++ + TG ++ D + IP V+F + + ++ F P+L
Sbjct: 65 GGITGYNWQAIHNKLSGATKGTGTQITEQPDGSLKLNIPSSVTFDTNSYAIKPSFAPVLD 124
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ L + P + + HTDS G N +S RA + S +++ + + +S +G
Sbjct: 125 QLTQTLQQNPEVIAQVVGHTDSTGQPAYNQTLSVNRAQSVVS-FLEQRGVAAQRLSAQGM 183
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
PI N+T+ GR N+R+EI +
Sbjct: 184 GQNQPIADNNTEAGRAANRRVEIYL 208
>gi|292492806|ref|YP_003528245.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
gi|291581401|gb|ADE15858.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
Length = 286
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAE-DEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++++ L + + + R + + +A E + +L + + + + +
Sbjct: 115 GQERQQMLMEVRELEARQAREQAKMAEARTRELEQRLAE--LDAEKTKRGYVLTLGDILF 172
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
V L + L + T L ++P + I+ HTDS G+ N +SQ RAD +
Sbjct: 173 EVDRAELTPGGMQNLFRLVTFLKEYPDREVVIEGHTDSTGSAVYNQELSQRRADSVYK-F 231
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ S I RG+ YP+ NDT GRQ N+R+EI I
Sbjct: 232 LMNNGISPERIVARGYGEAYPVAPNDTAAGRQRNRRVEIVIL 273
>gi|74318359|ref|YP_316099.1| hypothetical protein Tbd_2341 [Thiobacillus denitrificans ATCC
25259]
gi|74057854|gb|AAZ98294.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 225
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 12/186 (6%)
Query: 10 FIMTTISGCGLAS----REKKKVFLHKSNDTDIVNKRFGSSLDKA----EDEFQMQLQDT 61
++ T+SG L + + + K L + + G +D+ + + + +++
Sbjct: 37 AMIGTVSGAALGAIINHKNRGKGALIGAVGGGLTGAGVGYYMDQQAKDLQKQLRPEIEHG 96
Query: 62 GIVVSRI--GDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I V + + + + L+ +LP L I+ +LN++ T + + HTD
Sbjct: 97 DISVEKRASDNALLVSMTASTGFDNDSAALKAGYLPTLDKISRVLNQYGKTTVTVIGHTD 156
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S+GT + N +S+ RA + Y + V+ R S G P N T+ GR+ N+R+
Sbjct: 157 SVGTTQYNQALSERRAQSVLDYFASQKVNPLRLESY-GKGETEPRADNSTEDGRRLNRRV 215
Query: 179 EIQIFP 184
E+ I P
Sbjct: 216 ELWILP 221
>gi|146296538|ref|YP_001180309.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410114|gb|ABP67118.1| OmpA/MotB domain protein [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 257
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 7/171 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF---QMQLQDTGIVVSRIGDMITCYI 76
K + D + + + ++V + ++ +
Sbjct: 76 SGKNVKGTNTDIGGTTKNRQMTEEEIINDIQKQVLSLIKEHGIEGKVLVIQEERGLSILL 135
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN----LLISQE 132
+ L + ++ IA IL K P+ I I+ HTD++ +S
Sbjct: 136 KDVLFNSGSAQLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTA 195
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + +++ SV G+ PI +N T GR N+R+ I I
Sbjct: 196 RATTVLQEILRVSKVKPERFSVVGYGEYRPIASNKTPQGRALNRRVTIVIL 246
>gi|325954634|ref|YP_004238294.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323437252|gb|ADX67716.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 234
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 81/221 (36%), Gaps = 34/221 (15%)
Query: 2 IKELGLSMFI--MTTISGCGLASREKKK--VFLHKSNDTDIVNKR--------------- 42
+K GL++ + S C + ++
Sbjct: 6 LKTTGLAILLGGSFIFSSCEAVQNTNNTQRGAAIGTVAGGVIGGILGNNVGKGGNTALGS 65
Query: 43 -------------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-L 88
G +DK ++ + L +V + G + V+F L
Sbjct: 66 VIGAAVGGGAGILIGQHMDKQAEKIEQVLPGAEVVRTDEGINLILNENSSVTFDYNSENL 125
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
K L + + ++P T + I HTD++G+ NL +S++RA + +YL+ + S
Sbjct: 126 TSKAKNSLDKLIQVFKEYPDTNLLIVGHTDNVGSQNFNLPLSEKRAKSVVNYLVSK-GIS 184
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ ++ +G PI N T GR N+R+EI I +K
Sbjct: 185 SSRLTSKGVGLSEPIADNSTAAGRAQNRRVEIAITANEKMK 225
>gi|183221220|ref|YP_001839216.1| hypothetical protein LEPBI_I1834 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911311|ref|YP_001962866.1| endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775987|gb|ABZ94288.1| Endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779642|gb|ABZ97940.1| Putative outer membrane protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 354
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
+R + E++ ++ I + R + + I + L+ LP ++ I
Sbjct: 196 ERLSEQTKEFEEKLAKEITSGQIRLKRFHNKLIINIDDKISFDSGSSELKPAILPAIEKI 255
Query: 100 ATILNKFPSTVIAIQSHTDSIGT---LKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
IL +P I ++ HTD++ +NN +S ERA + +++Q + + S G
Sbjct: 256 RDILASYPENYIVVEGHTDNVPIKTKFRNNWHLSSERALSVLEFILQNKNLNPKNFSSAG 315
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ PI N TK + N+R++I + PRG
Sbjct: 316 YGEHQPIVPNSTKENKALNRRVDIVVIPRG 345
>gi|256840118|ref|ZP_05545627.1| outer membrane protein [Parabacteroides sp. D13]
gi|256739048|gb|EEU52373.1| outer membrane protein [Parabacteroides sp. D13]
Length = 226
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL-QDTGIVVSRIGDMITCYIPVHVSF-VSE 85
+ + G +DK + E + L +DT I G+ + + F +
Sbjct: 55 GAVIGAAVGGTAGALIGKKMDKQKKELEATLPEDTKIESVNNGEALKVTFDSGILFATNS 114
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L L+ AT L P T I I TD+ G + N +S++RA + YL+ +G
Sbjct: 115 STLSDASKSALRNFATSLKANPDTDIRIIGFTDNTGKVDYNQTLSEKRAKSVYDYLMMQG 174
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
VS++R + G P+ +NDT GR N+R+EI I +
Sbjct: 175 VSTDRMVY-EGKGIHDPVASNDTPEGRSLNRRVEIVILANQKM 216
>gi|77164341|ref|YP_342866.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|254434085|ref|ZP_05047593.1| Rickettsia 17 kDa surface antigen family [Nitrosococcus oceani
AFC27]
gi|76882655|gb|ABA57336.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|207090418|gb|EDZ67689.1| Rickettsia 17 kDa surface antigen family [Nitrosococcus oceani
AFC27]
Length = 248
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 80/217 (36%), Gaps = 36/217 (16%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI------------------------ 38
K L L++ I + GC R +
Sbjct: 8 KPLWLALAISMGMIGCAADGRYSQTQKGSAVGTVGGAAAGAAIGAAIDGGSGAGWGALAG 67
Query: 39 ------VNKRFGSSLDKA---EDEFQMQLQDTGIVVSRIGDM-ITCYIPVHV-SFVSEVF 87
G D+ E + + + + R+ D + IP +
Sbjct: 68 AVAGGLTGSAVGYMNDQQREMEAALAEERRGHQLEIQRLQDESLKLDIPSEISFDHDSDV 127
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L+ FLP L IA +L K+ TV+ + HTDS G+ K NL +S RA + + +R
Sbjct: 128 LKPAFLPTLDKIAEVLKKYNKTVVHVIGHTDSTGSEKYNLDLSLRRAGNV-AVYFERKGV 186
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++ +S+ G P +N T GRQ N+R+EI + P
Sbjct: 187 PSQRLSIYGRGESEPRASNATAAGRQLNRRVEIILKP 223
>gi|300313671|ref|YP_003777763.1| OmpA family protein [Herbaspirillum seropedicae SmR1]
gi|300076456|gb|ADJ65855.1| OmpA family protein [Herbaspirillum seropedicae SmR1]
Length = 241
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 78/213 (36%), Gaps = 33/213 (15%)
Query: 2 IKELGLSMFI-MTTISGCGLASREKKKVFLHKSNDTDIVNKR------------------ 42
+K+L ++ + +SGC S ++ +
Sbjct: 1 MKKLSIAAIAGVLALSGCADMSPTQRGTATGAGIGAGLGGIIGAATGGGGGGRALGGAAI 60
Query: 43 -----------FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLE 89
+ + ++ + + Q TG+ VS+ + + IP + ++
Sbjct: 61 GGAIGAVAGNIWSNRMENQKRAMEEATQGTGVQVSQTADNRLKLEIPSDISFDTGRADIK 120
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ P+L A L + P+T + I HTD+ G+ N +S +RA + + +
Sbjct: 121 PEMRPVLDRFAATLVENPATTVTIVGHTDNTGSDAINDPLSLQRASRTRD-YLSSRGVAA 179
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S++G P+ N + R N+R+EI +
Sbjct: 180 NRFSIQGRGSHEPLVANTSDANRARNRRVEIFV 212
>gi|149925845|ref|ZP_01914109.1| outer membrane protein, OmpA/MotB family [Limnobacter sp. MED105]
gi|149825962|gb|EDM85170.1| outer membrane protein, OmpA/MotB family [Limnobacter sp. MED105]
Length = 222
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 13 TTISGCGLAS--REKKKVFLHKSNDTDIVNKRFGSSLDKAE-------DEFQMQLQDTGI 63
++GC +A + + I G+S+D + L + I
Sbjct: 41 VAVAGCPMAPERKVDNTKTAIGTAVGAIGGAIVGNSIDGKDTVRGAALGGLFGYLVGSQI 100
Query: 64 VV-SRIGDMITCYIPVH-VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
V + + IP + ++ ++ +F L IA L P+T++ + +TDS G
Sbjct: 101 AVREQRDGSVMLDIPGAALFDTNKSDVKAQFAGTLDQIAATLRDNPNTIVCVIGYTDSTG 160
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + N +S RA + ++L +G+S R ++ G +P+ +NDT+ GR N+R+E+
Sbjct: 161 SDQYNQDLSVRRAQSVTNFLTAKGISGAR-LTAAGLGEGFPVASNDTESGRAQNRRVEMY 219
Query: 182 I 182
+
Sbjct: 220 V 220
>gi|329117988|ref|ZP_08246701.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327465876|gb|EGF12148.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 226
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 28/210 (13%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHK--SNDTDIVNKRFGS----------------- 45
++ +SGC + +K V G+
Sbjct: 8 TAAAVACTLALSGCITYADGTQKASKTAMYGLGGAAVCGIIGALSHGSKGARNSALACGA 67
Query: 46 -------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQ 97
+D E + + L +TG+ V R GD I +P +V+F L L
Sbjct: 68 VGAGVGGYMDYQEKKLRENLANTGVDVQRSGDQIKLVMPENVTFATGSATLSTNAQNALA 127
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
A L ++P T ++I HTD+ G+ N +SQ RA + S+L RGV+ +R ++ G
Sbjct: 128 AAAQTLTQYPDTTLSINGHTDNTGSDAINAPLSQRRAQAVASFLQSRGVNGSR-LATYGH 186
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ P+ +N T GR N+R+EI I P N
Sbjct: 187 GSRQPVASNATAEGRAQNRRVEILINPDQN 216
>gi|237654130|ref|YP_002890444.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
gi|237625377|gb|ACR02067.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
Length = 222
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/217 (21%), Positives = 83/217 (38%), Gaps = 37/217 (17%)
Query: 2 IKELGLSMFIMTT----ISGCGLASREKKKVFLHKSN--------DTDIVNKRFG----- 44
+K++ +++ + +SGC + ++ + + G
Sbjct: 1 MKKIIVTLSAVALAVSGLSGCANMNETQRDTGMGAAIGAVAGGLIGAATAGGNKGKSAAT 60
Query: 45 -----------------SSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSE 85
++ K E + TGI +S+ + + IP V V
Sbjct: 61 GAAIGAALGAGGGYLWSQNMQKQRAEMEQATAGTGIGISQTTDNQLKVDIPADVSFDVGR 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
++ P+L +A+ LN+ P T + I HTDS G+ N +S RA + +
Sbjct: 121 HAIKPNMRPVLDRLASTLNQHPVTTVTIIGHTDSTGSDAVNDPLSINRAA-ATRDYLVQR 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S + I+V G + P+ N T GR N+R+EI I
Sbjct: 180 GVSAQRIAVDGRGSRQPVADNSTASGRAMNRRVEIFI 216
>gi|254302748|ref|ZP_04970106.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322940|gb|EDK88190.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 182
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C KK S + V + K E + + G+ + R G+ + +P
Sbjct: 18 CSSTKTTKKTNVGVDSTNKYAVEDTEAN---KKPLEDIIVFNEEGVTIRREGNNLILSMP 74
Query: 78 VHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ F + ++ P L +A L + I I +TD IGT NL +S +RA
Sbjct: 75 ELILFDFDKYAVKDGIKPSLSTLAKALGENKDIHIKIDGYTDFIGTEAYNLDLSVKRARA 134
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
IK +LI +G + IS+ G+ + P TN T+ GR N+R+E I RG
Sbjct: 135 IKDFLISKGAIGSN-ISIEGYGEQNPAATNQTEAGRSKNRRVEF-IISRG 182
>gi|311106780|ref|YP_003979633.1| OmpA family protein 1 [Achromobacter xylosoxidans A8]
gi|310761469|gb|ADP16918.1| OmpA family protein 1 [Achromobacter xylosoxidans A8]
Length = 183
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 73/195 (37%), Gaps = 24/195 (12%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K +L + +M +SGC K+ + + +L
Sbjct: 1 MKPGKLAVMACLMLAVSGCVTKKTYDKEAQMAAEYAA-------------LNQKLTAELS 47
Query: 60 DTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
++++ + + + + F L K L IA L+ P + +Q +TD
Sbjct: 48 GDRAQITQLQNELKVTMVNEILFPEGGWRLSPKGEQTLAKIAPTLSNLPGQQVVVQGYTD 107
Query: 119 SIG-------TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +NL +S RAD + +L + IS +GF P+ +N T G
Sbjct: 108 NEPIGPELRSQFPSNLELSSARADNVARFLTSK-GVPPNSISAQGFGEARPVASNSTPQG 166
Query: 172 RQNNQRIEIQIFPRG 186
+ N+R+EI I G
Sbjct: 167 KAQNRRVEIVITSAG 181
>gi|258621630|ref|ZP_05716662.1| flagellar motor protein [Vibrio mimicus VM573]
gi|262165143|ref|ZP_06032880.1| Flagellar motor rotation protein MotB [Vibrio mimicus VM223]
gi|258586102|gb|EEW10819.1| flagellar motor protein [Vibrio mimicus VM573]
gi|262024859|gb|EEY43527.1| Flagellar motor rotation protein MotB [Vibrio mimicus VM223]
Length = 319
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 73/173 (42%), Gaps = 6/173 (3%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
S + + ++++ + + + +++ I V +G I
Sbjct: 129 SAESSTQDNQNTQSEMQQQQAKAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIR 188
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLIS 130
I +F FL+ KF P+++ IA ++ P + + HTD+ ++N +S
Sbjct: 189 IREKGAFPEGSAFLQPKFRPLVRQIADLVKDIPG-KVRVTGHTDNQKLDSELYRSNWDLS 247
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA + + + ++ + VRG A PI NDT+ R N+R+EI I
Sbjct: 248 AQRAVSVAQEMEKVKGFDHQRLQVRGMADTQPIGPNDTEAQRALNRRVEISIL 300
>gi|76809785|ref|YP_332623.1| ompA family protein [Burkholderia pseudomallei 1710b]
gi|76579238|gb|ABA48713.1| ompA family protein [Burkholderia pseudomallei 1710b]
Length = 316
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 73/202 (36%), Gaps = 24/202 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL---------------- 47
L + ++GC V
Sbjct: 109 RLSVFALAGALLAGCATQQGTNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGALVGGV 168
Query: 48 -----DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFLEKKFLPMLQLIA 100
+++ Q TG V+ D + +P V+F + + F P+L +A
Sbjct: 169 TGYNWQAIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFTPLLNDLA 228
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
T LN+ P ++ +TDS G+ +N +SQ RA + + + + + +S +G
Sbjct: 229 TTLNQNPQITASVVGYTDSTGSAAHNQTLSQNRAQSVVN-ALAQRGVAANRLSAQGMGAS 287
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
PI N T+ GR N+R+EI +
Sbjct: 288 NPIADNATEAGRAQNRRVEIYL 309
>gi|255013439|ref|ZP_05285565.1| OmpA family outer membrane protein [Bacteroides sp. 2_1_7]
Length = 213
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL-QDTGIVVSRIGDMITCYIPVHVSF-VSE 85
+ + G +DK + E + L +DT I G+ + + F +
Sbjct: 42 GAVIGAAVGGTAGALIGKKMDKQKKELEATLPEDTKIESVNNGEALKVTFDSGILFATNS 101
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L L+ AT L P T I I TD+ G + N +S++RA + YL+ +G
Sbjct: 102 STLSDASKSALRNFATSLKANPDTDIRIIGFTDNTGKVDYNQTLSEKRAKSVYDYLMMQG 161
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
VS++R + G P+ +NDT GR N+R+EI I +
Sbjct: 162 VSTDRMVY-EGKGIHDPVASNDTPEGRSLNRRVEIVILANQKM 203
>gi|194290514|ref|YP_002006421.1| outer membrane lipoprotein [Cupriavidus taiwanensis LMG 19424]
gi|193224349|emb|CAQ70360.1| putative outer membrane lipoprotein [Cupriavidus taiwanensis LMG
19424]
Length = 212
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 68/195 (34%), Gaps = 31/195 (15%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSL-------------------------DKAE 51
GC E++ + V G+ + +
Sbjct: 19 GCAT---EQQTHTAVGTGVGAAVGAGLGNLIGGNTTGTLVGAAVGGAIGGATGYNWNAIR 75
Query: 52 DEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPST 109
+ TG ++ D + IP V+F ++ F +L +A L++
Sbjct: 76 GKLNKDTAGTGTQITEQPDGSLKVNIPSQVTFDTDSATIKPSFRSVLDQVAQTLSQHQDV 135
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ HTDS G N+ +SQ RA + + + + +S G P+ N T+
Sbjct: 136 SANVVGHTDSTGNPNYNMQLSQRRAQSV-AGYLGDRGVARNRLSAEGRGQSQPVADNGTE 194
Query: 170 VGRQNNQRIEIQIFP 184
GR N+R+EI + P
Sbjct: 195 AGRAQNRRVEIFLKP 209
>gi|150025563|ref|YP_001296389.1| lipoprotein YiaD precursor [Flavobacterium psychrophilum JIP02/86]
gi|149772104|emb|CAL43580.1| Probable lipoprotein YiaD precursor [Flavobacterium psychrophilum
JIP02/86]
Length = 231
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 71/222 (31%), Gaps = 35/222 (15%)
Query: 1 MIKELG----LSMFIMTTISGCGL--ASREKKKVFLHKSNDTDIVNKR------------ 42
M K + LS + T +S C S ++ + ++
Sbjct: 1 MKKSIIYMLSLSFLLGTVLSSCDAIKNSNNTQRGATGGAVLGAVLGGVLGNNIGHGGNGA 60
Query: 43 ----------------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
G+ +DK + L + G + ++
Sbjct: 61 LGAVLGGVIGGVAGGVIGNKMDKQARKISESLPGAKVERVGEGIRLVLGENAIRFDTNKS 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
L L + + ++P T I I +TDS G NL +S++RA + +
Sbjct: 121 TLTASAKANLDKLVKVFTEYPDTDIQIYGYTDSSGADDYNLKLSEQRAASV-KTYLSAKG 179
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
++ + G PI N+T G+ N+R+E I +
Sbjct: 180 LASTRFNTSGLGEADPIAPNETADGKSQNRRVEFAITANDKM 221
>gi|94311700|ref|YP_584910.1| OmpA/MotB [Cupriavidus metallidurans CH34]
gi|93355552|gb|ABF09641.1| outer membrane protein, OmpA/MotB family(modular protein)
[Cupriavidus metallidurans CH34]
Length = 294
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 66/175 (37%), Gaps = 3/175 (1%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM 71
+G G L + + G + + + TG ++ D
Sbjct: 118 AAVGAGIGNLIGGNTTGTLVGAAVGGALGGATGYNWNAIRGKLNKDTAGTGTQITEQPDG 177
Query: 72 -ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ IP V+F ++ F +L +A L + + HTDS G + N+ +
Sbjct: 178 SLKVNIPSQVTFDTDSSTIKPSFRNVLDQVAQTLAQHQDVSANVVGHTDSTGNPQYNMQL 237
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
SQ RA + + + + +S G P+ N T+ GR N+R+EI + P
Sbjct: 238 SQRRAQSV-AGYLGDRGVARTRLSAEGRGQTQPVADNSTEAGRAQNRRVEIFLKP 291
>gi|146298022|ref|YP_001192613.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146152440|gb|ABQ03294.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 231
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 1/146 (0%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
G+ +DK E L + G +T ++ L L + +
Sbjct: 77 IGNKMDKQAREIDQALPGASVERVGEGIHLTLNENSVRFDTNKSTLTPTAKANLDKLVPV 136
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
N++ T I I +TD+ G + NL +S +RA +++YL+ + + G P
Sbjct: 137 FNEYGDTDIQIFGYTDNTGKPEYNLTLSGQRAASVQAYLVSK-GLKSSRFKTSGLGIADP 195
Query: 163 IDTNDTKVGRQNNQRIEIQIFPRGNI 188
I TNDT GR N+R+E I +
Sbjct: 196 IATNDTPEGRAQNRRVEFSITANDKM 221
>gi|186476941|ref|YP_001858411.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184193400|gb|ACC71365.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 217
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 75/205 (36%), Gaps = 24/205 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF----------------- 43
++ + + ++GC V T
Sbjct: 6 IMTRVSALAVVGALLAGCATEQGTNTAVGTGVGAGTGAALGAIFGGGKGAAIGAGVGAAV 65
Query: 44 ----GSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVF-LEKKFLPMLQ 97
G + +++ + TG ++ D + IP V+F + + ++ F P+L
Sbjct: 66 GGVTGYNWQNIKNKLGGATKGTGTQITEQPDGSLKLNIPSSVTFDTNSYAIKPSFAPVLS 125
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A LN+ P V + HTDS G N +S RA + L + + +S G
Sbjct: 126 QVAQTLNQNPEVVAQVVGHTDSTGQPAYNQTLSVNRAQSVAQQLAT-DGVAPQRLSATGM 184
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
PI N+T+ GR N+R+EI +
Sbjct: 185 GANQPIADNNTETGRAQNRRVEIYL 209
>gi|34497346|ref|NP_901561.1| outer membrane protein [Chromobacterium violaceum ATCC 12472]
gi|34103202|gb|AAQ59565.1| probable outer membrane protein [Chromobacterium violaceum ATCC
12472]
Length = 223
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 87/224 (38%), Gaps = 36/224 (16%)
Query: 1 MIKELGLSMFIMTT---ISGCGLASREKK------------------------------K 27
M+K +SM + + +SGC S +K
Sbjct: 1 MMKNAMVSMLVAVSVAGLSGCANMSDTQKGVGGGAAIGAGVGAAIGALTAGGHGGRSAAT 60
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSFVSEV 86
+ + K ++ + + TGI VS+ + + IP SF +
Sbjct: 61 GAAIGGLLGAGGGYLWSQHMQKQKEAMEQATKGTGIGVSQTADNRLKINIPSDASFDTNS 120
Query: 87 F-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
+ L+ P+L +AT L + P T + I HTD+ G+ N +S RA + YL RG
Sbjct: 121 YALKPSLKPVLDKLATTLQQNPVTSVNIIGHTDNTGSDAINNPLSVNRAKATQGYLASRG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
V NR I + G + P+ N T GR N+R+EI + K
Sbjct: 181 VDINR-IGIDGRGSREPVADNGTVSGRAMNRRVEIYVAEPAQAK 223
>gi|85711188|ref|ZP_01042248.1| flagellar motor protein [Idiomarina baltica OS145]
gi|85695101|gb|EAQ33039.1| flagellar motor protein [Idiomarina baltica OS145]
Length = 309
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 75/179 (41%), Gaps = 7/179 (3%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G A E+ K + S V ++ +++ ++ ++ + + ++G I I
Sbjct: 125 GGQQADSEEDKKAVDGSESDPAVEQQVKELMERIREQLSDNIKAGSLELEQLGQQIIIRI 184
Query: 77 PVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQ 131
+ SF FL+ +F P+++ +A L P I I HTD+ + +S
Sbjct: 185 KENGSFPEGSAFLQPQFKPVIREVAQALKDIPG-EITISGHTDNQPLVSEMYTSKWDLSA 243
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+RA + + + G+A PI N++ R N+R++I I +G K+
Sbjct: 244 KRAVAVAEEMTSVDGFDQSRLVTMGYADTKPIVPNNSTSNRALNRRVDIAIM-QGKAKE 301
>gi|224823894|ref|ZP_03697003.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
gi|224604349|gb|EEG10523.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
Length = 221
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 37/217 (17%)
Query: 2 IKELGLSM----FIMTTISGCGLASREKKKVFLHKSNDTD--------IVNKRFGSS--- 46
+K++ +++ F ++ +SGC + ++ + G S
Sbjct: 1 MKKIIVTLTAVAFGVSALSGCANMNETQRDTGTGAAIGAAAGAVIGGLTAGGHTGRSAAT 60
Query: 47 -------------------LDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHV-SFVSE 85
+ + + + + TG+ VS+ D + IP V
Sbjct: 61 GAAVGAALGAGGGYLWSKHMQEQKAAMEQATKGTGVSVSQTADNQLKLDIPSDVSFDSGR 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
++ P+L AT LN+ P T + I HTDS G+ N +S RA +SYL+ RG
Sbjct: 121 YDIKSNMRPILDRFATTLNQNPVTTVKIIGHTDSTGSDAINGPLSVNRASATRSYLVARG 180
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V+ NR IS+ G PI +N T GR N+R+EI +
Sbjct: 181 VAMNR-ISIDGRGSSEPIASNGTAAGRAKNRRVEIFV 216
>gi|14331084|emb|CAC40971.1| hypothetical protein [Vibrio pommerensis]
Length = 378
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 67/154 (43%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
++ V + + E + + V+ +++ +
Sbjct: 210 AAQTAMSEPMDVRPVDEVVMSEPEPVMETVAEPEPQVIETYTQVVSSAFGEALFETGSTS 269
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L + LQ + L ++P TV+ I HTDS G+ N +S++RA + +YLI +GV
Sbjct: 270 LSPSLMLQLQPLLARLKQYPETVVEISGHTDSKGSDTLNQRLSEQRAQSVANYLISKGVD 329
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
R V G+ P+ +NDT+ GR N+R+EI
Sbjct: 330 PERITRVVGYGESLPVASNDTESGRAQNRRVEIV 363
>gi|332667579|ref|YP_004450367.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332336393|gb|AEE53494.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 239
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/232 (19%), Positives = 79/232 (34%), Gaps = 45/232 (19%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI---------------------- 38
M K L + GC A + +
Sbjct: 1 MKKILFFLLISGMLFVGCKSAQKTQTSTGQRSDKPKSAKDKTTKGAVIGAAGGAVIGGII 60
Query: 39 --------------------VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
V GS +DK + + L +T V R+G+ I
Sbjct: 61 GNKGNNTVIGAIIGAAAGGAVGAVIGSKMDKQAKKMEEDLGNT-ATVERVGEGIKVTFNS 119
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ F + L + L+ A L + P T + I HTD++G+ N +S+ RA +
Sbjct: 120 QLLFDFGKSSLMESNKQTLESFAETLKQNPDTDLLIVGHTDNVGSDAFNQSLSENRAAAV 179
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
++ + S+ + ++G K P+ N T+ R N+R+EI I +K
Sbjct: 180 SNH-LSTFGVSSSRLKIQGMGEKQPLVANTTESERAQNRRVEIAIIANEAMK 230
>gi|227540121|ref|ZP_03970170.1| OmpA/MotB:Rickettsia surface antigen [Sphingobacterium spiritivorum
ATCC 33300]
gi|300771844|ref|ZP_07081715.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861]
gi|227239982|gb|EEI89997.1| OmpA/MotB:Rickettsia surface antigen [Sphingobacterium spiritivorum
ATCC 33300]
gi|300761230|gb|EFK58055.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 173
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 20/188 (10%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L L +F T+ C K+ L + + L ++EF+
Sbjct: 1 MKQLNIFTLILFCAVTLFSC-------KQQALTVNPGAVLSKDGTDDGLKNVKEEFKDA- 52
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
SR + I + F + +L K L +A +L T I + HT
Sbjct: 53 -------SRTEEGIKFSLSSDFLFPTNSSYLTDKSKGELSKLAKLLKDNSKTKIRVDGHT 105
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ GT + NL +S +RA +K +L+ S I+ +G P+ N T GRQ N+R
Sbjct: 106 DATGTPEYNLWLSDKRAVSVKKFLVD-SGISESRITTKGIGQAKPVADNKTPEGRQMNRR 164
Query: 178 IEIQIFPR 185
+E+ + +
Sbjct: 165 VEVVLLNQ 172
>gi|146306467|ref|YP_001186932.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145574668|gb|ABP84200.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 217
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 72/191 (37%), Gaps = 8/191 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + I+GC EKK+V V + + LD+ E + + ++
Sbjct: 1 MRANTIFAFTCCLLIAGCA--GSEKKEVAKAAVMPPPQVTRAW---LDEYEPKLREAVKG 55
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ R +++ PV SF + L L + +A +L + + H D
Sbjct: 56 SHFEFERRENLLVVTAPVQGSFNPDRPHMLLPVSLGPITRVAKLLESDEDMAVVVLGHAD 115
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S G N +S +RA + S + V G P ND+ GR N+R+
Sbjct: 116 SSGDATRNRELSDQRARAVTSIFRL-SGLKQNRLQVMGLGSDMPRAANDSAAGRALNRRV 174
Query: 179 EIQIFPRGNIK 189
EI + R ++
Sbjct: 175 EILLTSRDTMQ 185
>gi|258624381|ref|ZP_05719329.1| flagellar motor protein [Vibrio mimicus VM603]
gi|258583343|gb|EEW08144.1| flagellar motor protein [Vibrio mimicus VM603]
Length = 319
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 73/173 (42%), Gaps = 6/173 (3%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
S + + ++++ + + + +++ I V +G I
Sbjct: 129 SAESSTQDNQNTQSEMQQQQAKAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIR 188
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLIS 130
I +F FL+ KF P+++ IA ++ P + + HTD+ ++N +S
Sbjct: 189 IREKGAFPEGSAFLQPKFRPLVRQIADLVKDIPG-KVRVTGHTDNQKLDSELYRSNWDLS 247
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA + + + ++ + VRG A P+ NDT+ R N+R+EI I
Sbjct: 248 AQRAVSVAQEMEKVKGFDHQRLQVRGMADTQPLGPNDTEAQRALNRRVEISIL 300
>gi|298504468|gb|ADI83191.1| OmpA family outer membrane protein [Geobacter sulfurreducens KN400]
Length = 429
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 5/146 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D LDK +D + + I + V + ++ ++ +
Sbjct: 282 DTDGDGVYDYLDKCP----DTPKDLAVDAKGCPERICITLGVQ-FDTDKAVVKPQYNDEI 336
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ A L ++P I+ HTDS+G+ N +S+ RA + YL+ + S + +S +G
Sbjct: 337 KKAADFLKEYPDATAVIEGHTDSVGSDAYNQKLSERRAKAVMKYLVDKFGISAKRLSAKG 396
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
F PI N T+ GR N+R+ I
Sbjct: 397 FGESKPIADNATEEGRYKNRRVVAVI 422
>gi|39995468|ref|NP_951419.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
gi|39982231|gb|AAR33692.1| OmpA domain protein [Geobacter sulfurreducens PCA]
Length = 429
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 5/146 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D LDK +D + + I + V + ++ ++ +
Sbjct: 282 DTDGDGVYDYLDKCP----DTPKDLAVDAKGCPERICITLGVQ-FDTDKAVVKPQYNDEI 336
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ A L ++P I+ HTDS+G+ N +S+ RA + YL+ + S + +S +G
Sbjct: 337 KKAADFLKEYPDATAVIEGHTDSVGSDAYNQKLSERRAKAVMKYLVDKFGISAKRLSAKG 396
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
F PI N T+ GR N+R+ I
Sbjct: 397 FGESKPIADNATEEGRYKNRRVVAVI 422
>gi|66967954|gb|AAY59422.1| outer membrane protein A [Allochromatium vinosum]
Length = 225
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 35/216 (16%)
Query: 3 KELGLSMFIMTTISGCG----------------------------LASREKKKVFLHKSN 34
+ L LS ISGC S + K L +
Sbjct: 7 RTLVLSGVTAALISGCAADGSGLTETGRGAAIGTTAGAATGAIIGSLSGDAGKGALIGAV 66
Query: 35 DTDIVNKRFGSSLDKA----EDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSFV-SEVFL 88
++ GS +++ E + ++ I V ++ D + + +F +
Sbjct: 67 GGALLGTMVGSYMEEQQRDFERQLAPEIASGVIRVQKLPDHQLLVGMTGATAFEVDSDRI 126
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
F L+ I+ I+ K+ T +A+ HTDS G N +S+ RA + YL + GV
Sbjct: 127 RPGFYSTLEKISAIVRKYGKTQLAVSGHTDSTGAAAYNQTLSERRAASVGYYLERSGVLP 186
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R S G+ PI +N T+ GR+ N+R++I I P
Sbjct: 187 QRIYSA-GYGMNQPIASNATEDGRRLNRRVDILIMP 221
>gi|83589323|ref|YP_429332.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
gi|83572237|gb|ABC18789.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
Length = 249
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 69/195 (35%), Gaps = 12/195 (6%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKV--FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
K L+ + T++G + G+ L +A E Q +Q
Sbjct: 45 KMAALANSLAQTLTGAPTTGILTSGGLTSIVPGIAPAPGQGDEGAELARARAELQQYIQQ 104
Query: 61 TG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
G + ++ + + V F L + +L+ + L + P+ + ++
Sbjct: 105 EGLESQVTLNTEERGLVVSVADAVLFPKGSADLTPEARDLLRQVGRALARLPNY-LRVEG 163
Query: 116 HTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
HTD++ N +S RA + LI +S G+ P+ N+++
Sbjct: 164 HTDNLPINTPAFPSNWELSTARATNVVKVLISEAGIKPERLSATGYGEYRPVAPNNSEAD 223
Query: 172 RQNNQRIEIQIFPRG 186
N+R++I +
Sbjct: 224 MARNRRVDIVVLKEA 238
>gi|300114861|ref|YP_003761436.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113]
gi|299540798|gb|ADJ29115.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113]
Length = 249
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 84/224 (37%), Gaps = 42/224 (18%)
Query: 2 IKELG------LSMFIMTTISGCGLASREKKKV--------------------------- 28
+K++ L + I + GC R +
Sbjct: 7 MKKIIKCKLLWLVLAIGIGMLGCATDGRYSQTQKGSAVGTAGGAAAGAAIGAAIDGGSGA 66
Query: 29 ---FLHKSNDTDIVNKRFGSSLDKA---EDEFQMQLQDTGIVVSRIGDM-ITCYIPVHV- 80
L + + G D+ E + + + + R+ D + IP V
Sbjct: 67 GWGALAGAVVGGLTGSAVGYMNDQQREMEAALAEERRRHQLEIQRLQDESLKLDIPSEVS 126
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L+ FLP L IA +L K+ TV+ + HTDS G K NL +S RA + +
Sbjct: 127 FDHDSDALKPAFLPTLDKIADVLKKYNKTVVHVIGHTDSTGAEKYNLDLSLRRAGNV-AL 185
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++R ++ +S+ G P +N T GRQ N+R+EI + P
Sbjct: 186 YLERQGIPSQRLSIYGRGENEPRASNATASGRQLNRRVEIILKP 229
>gi|77919971|ref|YP_357786.1| outer membrane protein/peptidoglycan-associated (lipo)proteins
[Pelobacter carbinolicus DSM 2380]
gi|77546054|gb|ABA89616.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Pelobacter carbinolicus DSM 2380]
Length = 427
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 9/165 (5%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + + D +DK G++V + G I+ +
Sbjct: 266 CPDTPAD--TPVDTEGCMGDADKDGVADQMDKCPG------TPAGLMVDQQGCPISLTLA 317
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ V + ++ ++ L+ A + K+P + I I HTDS + NL +SQ RAD +
Sbjct: 318 IE-FDVDKADIKPRYHSELKRGADFIRKYPESRILIAGHTDSTASDAYNLALSQRRADSV 376
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++Y+I + +G+ +PI N T GRQ N+R+E+ +
Sbjct: 377 RNYVISNFGIKAERLEAKGYGEAFPIADNATVQGRQRNRRVELSV 421
>gi|225619153|ref|YP_002720379.1| outer membrane protein OmpA family [Brachyspira hyodysenteriae WA1]
gi|225213972|gb|ACN82706.1| outer membrane protein OmpA family [Brachyspira hyodysenteriae WA1]
Length = 403
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 64/140 (45%), Gaps = 4/140 (2%)
Query: 45 SSLDKAEDEFQMQL-QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
D + + L D + + + + + + + L+ + + + +
Sbjct: 263 EEEDYNRKKLEDNLYNDDNVTIDTVPEGLVLRLGEILFDTDSYTLKPEAKNTIDNVIKAI 322
Query: 104 NK-FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ +P I ++ HTD+ G + N +S++RA + Y++ + +S +GFA P
Sbjct: 323 KETYPDREIIVEGHTDNTGRKEYNQDLSEKRAKSVADYILPN--LDHDKLSYKGFADDEP 380
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
I +NDT GR+ N+R++I I
Sbjct: 381 IASNDTPDGRRKNRRVDIII 400
>gi|152981732|ref|YP_001352854.1| OmpA family protein [Janthinobacterium sp. Marseille]
gi|151281809|gb|ABR90219.1| OmpA family protein [Janthinobacterium sp. Marseille]
Length = 229
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 78/211 (36%), Gaps = 31/211 (14%)
Query: 2 IKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVN-------------------- 40
++ L + S+ + +SGC S ++ +
Sbjct: 1 MRTLMIGSLAAVLALSGCANMSETERGTAQGAGIGAGVGALLGGITGGSRNIAGGAAIGG 60
Query: 41 -------KRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSF-VSEVFLEKK 91
+ S ++ + + Q TG+ VS+ + + IP +SF +
Sbjct: 61 VIGAVAGNVWSSKMENQKRAMEQATQGTGVQVSQTSDNRLKLEIPSDISFATGRSDINPS 120
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
P+L AT L P+ + I HTDS G+ N +S +RA + + + +
Sbjct: 121 LQPILDRFATGLVDNPTATVTIIGHTDSTGSDAINNPLSFDRASRTRD-YLTGRGVAPQR 179
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I V G PI +N GR N+R+EI +
Sbjct: 180 IYVDGRGSHEPIASNADAAGRARNRRVEIFV 210
>gi|120435967|ref|YP_861653.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
gi|117578117|emb|CAL66586.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
Length = 235
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 84/220 (38%), Gaps = 31/220 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLA--SREKKKVFLHKSNDTDIVNKRFGS------------- 45
+ ++ + + + + GC + K+K + + ++ G+
Sbjct: 4 VFNKMFAVLVVSSLLFGCEATRNANNKQKGAVIGATGGAVIGGVIGNNTGDGNTALGSII 63
Query: 46 --------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEK 90
+DK + + ++ + G +T V F + + +
Sbjct: 64 GGVVGGAAGAIIGNKMDKQAKQIEEEIPGAEVERVGEGINVTFDESSGVYFDTEKYNINA 123
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
K L +A I ++P + + ++ HTD G+ NL +S+ RA + YL+ G+ R
Sbjct: 124 KSQTTLNKLADIFKEYPQSNVLVEGHTDDTGSDSYNLTLSKNRAQAVTGYLVDNGIDRGR 183
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + + P N T GR N+R+E+ I +K+
Sbjct: 184 -FTTKWYGESQPKYDNTTADGRSKNRRVELAIVANEELKE 222
>gi|209522383|ref|ZP_03270996.1| OmpA/MotB domain protein [Burkholderia sp. H160]
gi|209497180|gb|EDZ97422.1| OmpA/MotB domain protein [Burkholderia sp. H160]
Length = 150
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVF-LEKKFLPMLQLIA 100
G + D + + TG ++ D + IP V+F + + ++ F P+L +A
Sbjct: 1 TGYNWDNIRNRMSGATKGTGTQITEQPDGSLKLNIPSSVTFDTSSYTIKPSFAPVLDQLA 60
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L + P V ++ HTDS G+L+ N +S RA+ + + + + + +S G
Sbjct: 61 QTLQQNPEVVASVVGHTDSTGSLQYNQTLSVNRAESVT-GYLTQRGIAPQRLSATGMGPN 119
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
PI N+T+ GR N+R+EI +
Sbjct: 120 QPIADNNTEAGRAANRRVEIYL 141
>gi|153004433|ref|YP_001378758.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152028006|gb|ABS25774.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 498
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 10/170 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV-------VSRIGDMITC 74
E F + N R G + D E + + G V+ + IT
Sbjct: 330 QAEDADGFQDGDGCPEDDNDRDGIADDDDECPDEAEDPGGGARDGCPDGVVTYRENRITV 389
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQER 133
V L+ + +L +A+IL P + ++ HTD +G N +S+ R
Sbjct: 390 RGKVQ-FETGSARLKPESQRLLDQVASILRAHPEIRRVRVEGHTDDVGPALTNKELSERR 448
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
AD ++ L++RG++ +R +S+RG+ PI N TK GR N+R+E I
Sbjct: 449 ADSVRDALVRRGIAPSR-LSIRGYGESRPIAPNKTKAGRAKNRRVEFVIT 497
>gi|110597916|ref|ZP_01386198.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Chlorobium
ferrooxidans DSM 13031]
gi|110340493|gb|EAT58979.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Chlorobium
ferrooxidans DSM 13031]
Length = 229
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 6 GLSMFIMTTIS-GCGLASREK------------------------KKVFLHKSNDTDIVN 40
L + MTT++ GC +S K L +
Sbjct: 13 LLLILAMTTLTWGCQSSSNAGRGAGIGATAGGVIGGIIGSRTGSWAKGALIGAAIGGASG 72
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF-LPMLQLI 99
G+ +DK E + ++ G+ V R G+ I + + F S ++ +
Sbjct: 73 ALIGNYMDKQAAEIRNEV--NGVQVEREGEGIRVTMDSGILFTSGSSTLTSTSRANIEKL 130
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A I N++ T + I+ HTD+ G+ +N L+S+ RA+ + L+ S+R +S G+
Sbjct: 131 ARIFNRYNDTKVVIEGHTDNTGSAASNQLLSERRAESVAK-LLSAYGVSDRRLSPVGYGQ 189
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
P+ +NDT+ GRQNN+R+E+ I+ +K+
Sbjct: 190 SRPVASNDTEYGRQNNRRVEVLIYANEELKQ 220
>gi|288942206|ref|YP_003444446.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
180]
gi|288897578|gb|ADC63414.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
Length = 225
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 86/216 (39%), Gaps = 35/216 (16%)
Query: 3 KELGLSMFIMTTISGCG----------------------------LASREKKKVFLHKSN 34
+ L LS ISGC S + K L +
Sbjct: 7 RTLVLSGVTAALISGCAADGSGLTETGRGAAIGTTAGAATGAIIGSLSGDAGKGALIGAV 66
Query: 35 DTDIVNKRFGSSLDKA----EDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSFV-SEVFL 88
++ GS +++ E + ++ I V ++ D + + +F +
Sbjct: 67 GGALLGTMVGSYMEEQQRDFERQLAPEIASGVIRVQKLPDHQLLVGMTGATAFEVDSDRI 126
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ F L+ I+ I+ K+ T +A+ HTDS G N +S+ RA + YL + GV
Sbjct: 127 QPGFYSTLEKISAIVRKYGKTQLAVSGHTDSTGAAAYNQTLSERRAASVGYYLERSGVLP 186
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R S G+ PI +N T+ GR+ N+R++I I P
Sbjct: 187 QRIYSA-GYGMNQPIASNATEDGRRLNRRVDILIMP 221
>gi|317121531|ref|YP_004101534.1| OmpA/MotB domain protein [Thermaerobacter marianensis DSM 12885]
gi|315591511|gb|ADU50807.1| OmpA/MotB domain protein [Thermaerobacter marianensis DSM 12885]
Length = 343
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 61/176 (34%), Gaps = 12/176 (6%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSS------LDKAEDEFQMQLQDTGIVVSRIGDMITC 74
A E +V G +D+ + +
Sbjct: 157 APEENPGGQGEGPGRLPVVTGPPGEEERLRDLVDQVNAALRDAGLGGRASAQLTDRGVAI 216
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
V F L + +L+ +A IL + P T I ++ HTD++ + N +
Sbjct: 217 IFEDQVFFDLGRADLRPEGRELLRRLAPILARVPGT-ILVEGHTDNLPIHSDRFPSNWEL 275
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
S RA + +L ++ R ++ G+ P N ++ R N+R+EI + +
Sbjct: 276 STARATTVVRFLAEQAGLDPRRLAAAGYGEWRPRFPNTSEANRARNRRVEIVVLRQ 331
>gi|4322001|gb|AAD15905.1| sodium-driven polar flagellar protein [Vibrio parahaemolyticus]
Length = 315
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + + +++ + ++ + + +++ I V +G I +
Sbjct: 134 STQSNQSAESDMQQQQSKEMSQEMETLMESIKKALEREIEQGAIEVENLGQQIVIRMREK 193
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERA 134
+F FL+ KF P+++ IA ++ P + I HTD+ ++N +S +RA
Sbjct: 194 GAFPEGSAFLQPKFRPLVRQIAELVKDVPGI-VRISGHTDNQRLDSELYRSNWDLSSQRA 252
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + S++ + VRG A P+ ND+ R N+R+EI I
Sbjct: 253 VSVAQEMEKVRGFSHQRLRVRGMADTEPLVPNDSDENRALNRRVEISIM 301
>gi|254487455|ref|ZP_05100660.1| OmpA family domain protein [Roseobacter sp. GAI101]
gi|214044324|gb|EEB84962.1| OmpA family domain protein [Roseobacter sp. GAI101]
Length = 221
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + L + V G +LD+ E + + QL D+ ++++ GD + +P
Sbjct: 55 SKGDGNRAEGALAGALAGGAVGAGVGYTLDQQEADLRRQL-DSNVIITNTGDRLIVTLPQ 113
Query: 79 HVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ F ++ ++ L +A +N + ++ + + HTDS+G N +S+ RA+ +
Sbjct: 114 DILFATDSTTVQSGMQSDLAALARNVNVYSNSTLQVIGHTDSVGDASYNQQLSEGRANAV 173
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ LI GV NR I G P+ +N G+ N+R+EI I P
Sbjct: 174 ANVLIGNGVPRNR-IQAVGRGESQPVASNLNASGKAQNRRVEIVILPNA 221
>gi|221199341|ref|ZP_03572385.1| ompA family protein [Burkholderia multivorans CGD2M]
gi|221205757|ref|ZP_03578772.1| ompA family protein [Burkholderia multivorans CGD2]
gi|221211556|ref|ZP_03584535.1| inner membrane lipoprotein YiaD [Burkholderia multivorans CGD1]
gi|221168917|gb|EEE01385.1| inner membrane lipoprotein YiaD [Burkholderia multivorans CGD1]
gi|221174595|gb|EEE07027.1| ompA family protein [Burkholderia multivorans CGD2]
gi|221180626|gb|EEE13029.1| ompA family protein [Burkholderia multivorans CGD2M]
Length = 214
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 74/207 (35%), Gaps = 27/207 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL----------- 47
+K L + ++GC V
Sbjct: 3 MKIATRLSVFALAGALLAGCASQQGTNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGA 62
Query: 48 ----------DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKFLPM 95
+++ TG V+ D + +P V+F + + F P+
Sbjct: 63 LVGGVTGYNWQAIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPL 122
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +AT LN+ P ++ +TDS G+ + N +SQ RA + + + + + +S +
Sbjct: 123 LNDLATTLNQNPQVTASVIGYTDSTGSAQLNQTLSQNRAQSVVN-ALVQRGVAGNRLSAQ 181
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ N T+ GR N+R+EI +
Sbjct: 182 GMGPSNPVADNSTEAGRAQNRRVEIYL 208
>gi|110638110|ref|YP_678319.1| OmpA family peptidoglycan-associated lipoprotein [Cytophaga
hutchinsonii ATCC 33406]
gi|110280791|gb|ABG58977.1| peptidoglycan-associated lipoprotein, OmpA family [Cytophaga
hutchinsonii ATCC 33406]
Length = 640
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ V + L + + L + IL P+ I + HTDS G +N+++S R
Sbjct: 528 IILRNVFFDVDKATLRPESVQELDKLVDILRHNPNLKIELSGHTDSDGNDDHNMVLSDNR 587
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
A + YLI++G + ++ +G+ PI+ NDT +Q N+R E++I
Sbjct: 588 AKAVVDYLIKKGGINPNRLTWKGYGETKPIELNDTPEHKQQNRRTEVKILSNE 640
>gi|260911422|ref|ZP_05918013.1| lipoprotein PG3 [Prevotella sp. oral taxon 472 str. F0295]
gi|260634469|gb|EEX52568.1| lipoprotein PG3 [Prevotella sp. oral taxon 472 str. F0295]
Length = 225
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 70/209 (33%), Gaps = 27/209 (12%)
Query: 1 MIK-ELGLSMFIMTTISGCGLASRE----------------------KKKVFLHKSNDTD 37
M K +L + + + GC + +
Sbjct: 1 MKKMKLMTLLMCLALVFGCKTKQGTGALIGTGGGALLGAVIGKVAGNTVVGSVVGATVGA 60
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSF-VSEVFLEKKFL 93
G +DK Q++ + + + + F ++ L +
Sbjct: 61 AAGSMIGKHMDKVAKRTAEQVKSAKVEEVTDANGLKAVKVTFDSGILFATNKAVLSQSSK 120
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L + +L + + I HTD+ G N+ +S RA + +YL GV +F
Sbjct: 121 NELAKFSQVLKENRDCHVDIYGHTDNTGNDGINIPLSNSRAQSVVNYLSNCGVPRGQFQK 180
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V G P+ +N + GRQ N+R+E+ +
Sbjct: 181 VEGKGSSEPVASNASASGRQQNRRVEVYL 209
>gi|89070689|ref|ZP_01157958.1| OmpA family protein [Oceanicola granulosus HTCC2516]
gi|89043710|gb|EAR49914.1| OmpA family protein [Oceanicola granulosus HTCC2516]
Length = 229
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 52/163 (31%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
E+ + + V G SLD+ E E + L + + GD + +P + F
Sbjct: 67 EERNRNIAAGALVGAAVGAGVGYSLDRQEAELRRSL-GNNVRIDNTGDSLVVTLPQDILF 125
Query: 83 V-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L L +A LN +PST I + HTD+ G N +S+ RA + S L
Sbjct: 126 DTDSATLSGSLQSDLNALARSLNNYPSTTITVIGHTDNTGEASYNQNLSRRRAQAVTSTL 185
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I GVS+ R +V G PI TN T+ GR+ N+R+EI I P
Sbjct: 186 ISSGVSAGRINTV-GRGEDAPIATNLTEDGRRQNRRVEIIINP 227
>gi|237744058|ref|ZP_04574539.1| outer membrane porin F [Fusobacterium sp. 7_1]
gi|256028141|ref|ZP_05441975.1| Outer membrane porin F [Fusobacterium sp. D11]
gi|260494357|ref|ZP_05814488.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33]
gi|289766078|ref|ZP_06525456.1| outer membrane porin F [Fusobacterium sp. D11]
gi|229431287|gb|EEO41499.1| outer membrane porin F [Fusobacterium sp. 7_1]
gi|260198503|gb|EEW96019.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33]
gi|289717633|gb|EFD81645.1| outer membrane porin F [Fusobacterium sp. D11]
Length = 182
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 6/172 (3%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+ C +K S + V + K E + + G+ + R G+ +
Sbjct: 16 TACSSTKTNRKTNVGVDSTNKYAVEDTEAN---KKPLEDIIVFNEEGVTIRREGNNLILS 72
Query: 76 IPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+P + F + ++ K P L +A L + I I +TD IGT NL +S +RA
Sbjct: 73 MPELILFDFDKYIVKDKIKPSLSTLAKALGENKDIHIKIDGYTDFIGTEAYNLELSVKRA 132
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ IK +LI RG + IS+ G+ + P DTN T GR N+R+E I RG
Sbjct: 133 NAIKDFLISRGAIGSN-ISIEGYGEQNPADTNQTAAGRSRNRRVEF-IISRG 182
>gi|262375710|ref|ZP_06068942.1| type VI secretion system OmpA/MotB [Acinetobacter lwoffii SH145]
gi|262309313|gb|EEY90444.1| type VI secretion system OmpA/MotB [Acinetobacter lwoffii SH145]
Length = 217
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 32/209 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS------------------- 45
+ ++ ++GC V K+ ++ G
Sbjct: 6 ISAAVAGAVALTGCQSTGSNIGGVEYDKAALGTLIGTAAGYGVSKSNANTSRQNNRAAAI 65
Query: 46 ----------SLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVS-EVFLEKKFL 93
LD E + + TG+ V+R D I +P ++F + + ++ F
Sbjct: 66 GAVVGGAAGVYLDNKEKKLRQATAGTGVDVNRNADGSINLVMPGSITFDTNKSNIKPNFY 125
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L +A +L + + I + +TDS G NL +SQ RA+ + +YL +GVS R I+
Sbjct: 126 GTLNKVAQVLTEDNQSGILVTGYTDSTGNDSINLPLSQARANSVATYLAGQGVSRTR-IN 184
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+G PI N T G++ N+R+EI +
Sbjct: 185 AQGLGSANPIADNTTAAGKEQNRRVEIAV 213
>gi|222054259|ref|YP_002536621.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221563548|gb|ACM19520.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 242
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 76/217 (35%), Gaps = 35/217 (16%)
Query: 2 IKELGLSMFIMTTISGCGLAS------------------------------REKKKVFLH 31
IK + + + +GC + +
Sbjct: 21 IKVVAGASIVAMLAAGCATNPDGSYEFKRSAIGSLGGAALGAGIGALAGGKTHRGRNAAI 80
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEK 90
+V G +D+ + L + V R GD + +P + F + L+
Sbjct: 81 GGLSGAVVGGGIGYYMDRQAAALKKNLPE--AEVVRDGDKVYVALPSGILFDLGKDALKS 138
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L A L T I +Q HTDS G+ N +S+ RA ++ +L GV + R
Sbjct: 139 GAKESLSKAAATLKA-SETNIVVQGHTDSTGSDAINQPLSERRAKQVRDFLTANGVPAFR 197
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ G+ P NDT R N+R++++I P
Sbjct: 198 -LTAVGYGSSRPAVANDTDANRALNRRVQLEISPNEK 233
>gi|320536711|ref|ZP_08036721.1| OmpA family protein [Treponema phagedenis F0421]
gi|320146448|gb|EFW38054.1| OmpA family protein [Treponema phagedenis F0421]
Length = 412
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 3/157 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV---VSRIGDMITCYIPVHVSFVSEVFL 88
+ + + + ++ ++++ GI +S+ + IT I L
Sbjct: 256 EGTASAEITETKKLDKAAVAEDLTQKIEELGIENTTISQTDEGITISIENIQFEADSARL 315
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
LQ I +L FP + I HT GT +S+ERAD + YL + G+
Sbjct: 316 LSSEKEKLQKIGRLLQGFPDKELLISGHTALRGTAAERQKLSEERADSVARYLEEIGIRD 375
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + RGF + P+ N + R N+R+EI I +
Sbjct: 376 TQHLYTRGFGARRPLAPNTNEENRARNRRVEITILEK 412
>gi|241663775|ref|YP_002982135.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12D]
gi|240865802|gb|ACS63463.1| OmpA/MotB domain protein [Ralstonia pickettii 12D]
Length = 209
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 74/207 (35%), Gaps = 24/207 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKK---------------------KVFLHKSNDTDIV 39
M +L I +GC + + K
Sbjct: 1 MKAKLISVSLIALLAAGCATEQQNQTAMGTGVGAAVGAGIGALVGNGKGAAIGGALGAAT 60
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFLPMLQ 97
G + + + TG +S D + IP V ++ F L
Sbjct: 61 GAAVGYNWGAIKSKLAGDTAGTGTQISEQPDGSLKLNIPSQVSFDTDSAVIKPSFRGPLD 120
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A L + P + HTDS G N+ +SQ+RA + SYL RGV+ NR +S G
Sbjct: 121 SVAQTLTQHPELAANVVGHTDSTGNPNYNMTLSQKRAQSVASYLTDRGVARNR-LSAEGR 179
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ N T+ GR N+R+EI + P
Sbjct: 180 GQNQPVADNATEAGRAQNRRVEIYLKP 206
>gi|187929665|ref|YP_001900152.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12J]
gi|309781567|ref|ZP_07676302.1| inner membrane lipoprotein YiaD [Ralstonia sp. 5_7_47FAA]
gi|187726555|gb|ACD27720.1| OmpA/MotB domain protein [Ralstonia pickettii 12J]
gi|308919672|gb|EFP65334.1| inner membrane lipoprotein YiaD [Ralstonia sp. 5_7_47FAA]
Length = 209
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 50/207 (24%), Positives = 74/207 (35%), Gaps = 24/207 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKK---------------------KVFLHKSNDTDIV 39
M +L I +GC + + K
Sbjct: 1 MKAKLISVSLIALLAAGCATEQQNQTAMGTGVGAAVGAGIGALVGNGKGAAIGGALGAAT 60
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFLPMLQ 97
G + + + TG +S D + IP V ++ F L
Sbjct: 61 GAAVGYNWGAIKSKLAGDTAGTGTQISEQPDGSLKLNIPSQVSFDTDSAVIKPSFRGPLD 120
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A L + P + HTDS G NL +SQ+RA + SYL RGV+ NR +S G
Sbjct: 121 SVAQTLTQHPELAANVVGHTDSTGNPNYNLTLSQKRAQSVASYLTDRGVARNR-LSAEGR 179
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ N T+ GR N+R+EI + P
Sbjct: 180 GQNQPVADNATEAGRAQNRRVEIYLKP 206
>gi|262402758|ref|ZP_06079319.1| Flagellar motor rotation protein MotB [Vibrio sp. RC586]
gi|262351540|gb|EEZ00673.1| Flagellar motor rotation protein MotB [Vibrio sp. RC586]
Length = 304
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 73/173 (42%), Gaps = 6/173 (3%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
S + + ++++ + + + +++ I V +G I
Sbjct: 114 SAESSTQENQNTQSDMQQQQAKAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIR 173
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLIS 130
I +F FL+ KF P+++ IA ++ P + + HTD+ ++N +S
Sbjct: 174 IREKGAFPEGSAFLQPKFRPLVRQIADLVKDIPG-KVRVTGHTDNQKLDSELYRSNWDLS 232
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA + + + ++ + VRG A P+ NDT+ R N+R+EI I
Sbjct: 233 AQRAVSVAQEMEKVKGFDHQRLQVRGMADTQPLGPNDTEAQRALNRRVEISIL 285
>gi|269962340|ref|ZP_06176690.1| flagellar motor protein [Vibrio harveyi 1DA3]
gi|269832836|gb|EEZ86945.1| flagellar motor protein [Vibrio harveyi 1DA3]
Length = 314
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 10/178 (5%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA----EDEFQMQLQDTGIVVSRIGD 70
++G + +S+ +++ +D + + +++ I V +G
Sbjct: 124 LTGGQSPETSTQNNQSAESDMQQQQSEQTSQEMDTLMESIKKALEREIEQGAIEVENLGQ 183
Query: 71 MITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKN 125
I + +F FL+ KF P+++ IA ++ P + + HTD+ ++
Sbjct: 184 QIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGI-VRVSGHTDNQPLDSELYRS 242
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA + + + S++ + VRG A P+ ND+ R N+R+EI I
Sbjct: 243 NWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPLAPNDSDANRALNRRVEISIM 300
>gi|2130949|dbj|BAA20285.1| PomB [Vibrio alginolyticus]
Length = 315
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 77/178 (43%), Gaps = 10/178 (5%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA----EDEFQMQLQDTGIVVSRIGD 70
++G + + +++ +K ++ + + +++ I V +G
Sbjct: 125 LTGGQSPATSTQNNESAEADMQQQQSKEMSQEMETLMESIKKALEREIEQGAIEVENLGQ 184
Query: 71 MITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKN 125
I + +F FL+ KF P+++ IA ++ P + + HTD+ ++
Sbjct: 185 QIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGI-VRVSGHTDNRPLDSELYRS 243
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA + + + S++ + VRG A P+ ND+ R N+R+EI I
Sbjct: 244 NWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPLLPNDSDDNRALNRRVEISIM 301
>gi|53718641|ref|YP_107627.1| OmpA family transmembrane protein [Burkholderia pseudomallei
K96243]
gi|53725212|ref|YP_102481.1| ompA family protein [Burkholderia mallei ATCC 23344]
gi|67639751|ref|ZP_00438587.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|121600283|ref|YP_993611.1| ompA family protein [Burkholderia mallei SAVP1]
gi|124385832|ref|YP_001028928.1| ompA family protein [Burkholderia mallei NCTC 10229]
gi|126440263|ref|YP_001058104.1| ompA family protein [Burkholderia pseudomallei 668]
gi|126449467|ref|YP_001081159.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|126452105|ref|YP_001065339.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|134281074|ref|ZP_01767783.1| OmpA family protein [Burkholderia pseudomallei 305]
gi|167003046|ref|ZP_02268836.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|167718574|ref|ZP_02401810.1| ompA family protein [Burkholderia pseudomallei DM98]
gi|167814738|ref|ZP_02446418.1| ompA family protein [Burkholderia pseudomallei 91]
gi|167901748|ref|ZP_02488953.1| ompA family protein [Burkholderia pseudomallei NCTC 13177]
gi|217419903|ref|ZP_03451409.1| ompA family protein [Burkholderia pseudomallei 576]
gi|226194470|ref|ZP_03790068.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|237811323|ref|YP_002895774.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|242316655|ref|ZP_04815671.1| ompA family protein [Burkholderia pseudomallei 1106b]
gi|254177848|ref|ZP_04884503.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|254190801|ref|ZP_04897308.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254196800|ref|ZP_04903224.1| ompA family protein [Burkholderia pseudomallei S13]
gi|254261713|ref|ZP_04952767.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|254298274|ref|ZP_04965726.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|254357860|ref|ZP_04974133.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|52209055|emb|CAH34995.1| putative OmpA family transmembrane protein [Burkholderia
pseudomallei K96243]
gi|52428635|gb|AAU49228.1| ompA family protein [Burkholderia mallei ATCC 23344]
gi|121229093|gb|ABM51611.1| ompA family protein [Burkholderia mallei SAVP1]
gi|124293852|gb|ABN03121.1| ompA family protein [Burkholderia mallei NCTC 10229]
gi|126219756|gb|ABN83262.1| ompA family protein [Burkholderia pseudomallei 668]
gi|126225747|gb|ABN89287.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|126242337|gb|ABO05430.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|134247380|gb|EBA47465.1| OmpA family protein [Burkholderia pseudomallei 305]
gi|148026987|gb|EDK85008.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|157808098|gb|EDO85268.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|157938476|gb|EDO94146.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|160698887|gb|EDP88857.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|169653543|gb|EDS86236.1| ompA family protein [Burkholderia pseudomallei S13]
gi|217397207|gb|EEC37223.1| ompA family protein [Burkholderia pseudomallei 576]
gi|225933555|gb|EEH29544.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|237503911|gb|ACQ96229.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|238520349|gb|EEP83810.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|242139894|gb|EES26296.1| ompA family protein [Burkholderia pseudomallei 1106b]
gi|243061351|gb|EES43537.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|254220402|gb|EET09786.1| ompA family protein [Burkholderia pseudomallei 1710a]
Length = 215
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 73/202 (36%), Gaps = 24/202 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL---------------- 47
L + ++GC V
Sbjct: 8 RLSVFALAGALLAGCATQQGTNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGALVGGV 67
Query: 48 -----DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFLEKKFLPMLQLIA 100
+++ Q TG V+ D + +P V+F + + F P+L +A
Sbjct: 68 TGYNWQAIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFTPLLNDLA 127
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
T LN+ P ++ +TDS G+ +N +SQ RA + + + + + +S +G
Sbjct: 128 TTLNQNPQITASVVGYTDSTGSAAHNQTLSQNRAQSVVN-ALAQRGVAANRLSAQGMGAS 186
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
PI N T+ GR N+R+EI +
Sbjct: 187 NPIADNATEAGRAQNRRVEIYL 208
>gi|161524037|ref|YP_001579049.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|189351202|ref|YP_001946830.1| putative OmpA family transmembrane protein [Burkholderia
multivorans ATCC 17616]
gi|160341466|gb|ABX14552.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
gi|189335224|dbj|BAG44294.1| putative OmpA family transmembrane protein [Burkholderia
multivorans ATCC 17616]
Length = 214
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 74/207 (35%), Gaps = 27/207 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL----------- 47
+K L + ++GC V
Sbjct: 3 MKIATRLSVFALAGALLAGCATQQGNNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGA 62
Query: 48 ----------DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKFLPM 95
+++ TG V+ D + +P V+F + + F P+
Sbjct: 63 LVGGVTGYNWQAIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPL 122
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +AT LN+ P ++ +TDS G+ + N +SQ RA + + + + + +S +
Sbjct: 123 LNDLATTLNQNPQVTASVIGYTDSTGSAQLNQTLSQNRAQSVVN-ALVQRGVAGNRLSAQ 181
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ N T+ GR N+R+EI +
Sbjct: 182 GMGPSNPVADNSTEAGRAQNRRVEIYL 208
>gi|73540381|ref|YP_294901.1| OmpA [Ralstonia eutropha JMP134]
gi|72117794|gb|AAZ60057.1| OmpA [Ralstonia eutropha JMP134]
Length = 212
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 69/195 (35%), Gaps = 31/195 (15%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSL-------------------------DKAE 51
GC E++ + V G+ + +
Sbjct: 19 GCAT---EQQTHTAVGTGVGAAVGAGLGNLIGGNTTGTLVGAAVGGAVGGATGYNWNAIR 75
Query: 52 DEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPST 109
+ TG ++ D + IP V+F ++ F +L +A L +
Sbjct: 76 GKLNKDTAGTGTQITEQPDGSLKVNIPSQVTFDTDSATIKPSFRSVLDQVAQTLGQHQDV 135
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
V + HTDS G + N+ +SQ RA + + + + +S G P+ N T+
Sbjct: 136 VANVVGHTDSTGNAQYNMQLSQRRAQSV-ATYLGDRGVARNRLSAEGRGQTQPVADNATE 194
Query: 170 VGRQNNQRIEIQIFP 184
GR N+R+EI + P
Sbjct: 195 AGRTQNRRVEIFLKP 209
>gi|239818112|ref|YP_002947022.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
gi|239804689|gb|ACS21756.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
Length = 219
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 82/220 (37%), Gaps = 35/220 (15%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVF----------------LHKSNDTDIVNKR-- 42
M K + + +SGC + ++ N I
Sbjct: 1 MKKFVLATTAAALVLSGCAGGMTDTQRNTGIGAGIGALGGAAIGSATGGNRGAIGTGAVV 60
Query: 43 -----------FGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHV-SFVSEVFLE 89
+ ++ + + + Q TG+ V++ + + IP V V ++
Sbjct: 61 GAAAGALGGYLWSQRMENQKRQMEAATQGTGVAVTQTPNNELKLQIPSDVSFDVGRSNIK 120
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
F P+L A+ L P+ + I HTD+ G+ N +S +RA + YL+ R S
Sbjct: 121 SNFAPVLDQFASGLRNNPNAEVRIIGHTDNTGSDAINNPLSVDRAASTRDYLVAR-GVSA 179
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI---FPRG 186
+ G PI N++ GR N+R+EI + PRG
Sbjct: 180 AAFRIEGRGSHEPIANNNSDAGRAQNRRVEIYVGERAPRG 219
>gi|305666954|ref|YP_003863241.1| OmpA family protein [Maribacter sp. HTCC2170]
gi|88709183|gb|EAR01417.1| OmpA family protein [Maribacter sp. HTCC2170]
Length = 217
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 87/212 (41%), Gaps = 36/212 (16%)
Query: 12 MTTISGCGLA--SREKKKVFLHKSNDTDIVNKRFGS------------------------ 45
M I+GC + K+K + ++ ++ G+
Sbjct: 1 MALITGCSATRNANNKQKGAVIGASGGAVIGGIIGNNVGKKGNTALGAIIGAVVGGVAGG 60
Query: 46 ----SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV---HVSFVSEVFLEKKFLPMLQL 98
+D+ + + ++ G V+R+G+ I S+ ++ L
Sbjct: 61 YIGDRMDRQAERIEEEIP--GAEVTRVGEGINVTFNEEAGVYFDTSKSNVKGTSATTLDK 118
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A I ++P++ + I+ HTDS G N+ +SQ+RA+ + +YLI + S + +
Sbjct: 119 LAGIFKEYPNSDVLIEGHTDSAGPDDYNMKLSQQRAESVTNYLISK-GIEANRFSTKWYG 177
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
P N+T G+ N+R+E+ I ++K+
Sbjct: 178 ENQPKADNETTEGKAKNRRVELAIIASKDLKE 209
>gi|110636642|ref|YP_676849.1| outer membrane porin F [Cytophaga hutchinsonii ATCC 33406]
gi|110279323|gb|ABG57509.1| outer membrane protein, porin F precursor [Cytophaga hutchinsonii
ATCC 33406]
Length = 669
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMI 72
K+ L + ++ G + + + ++ I
Sbjct: 497 ASSNYDSATYKIVLPAGAKYGYLAEKEGYVSINENIDLTDMKAYKEYEKDLYITPIETGQ 556
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ L+ + P L + T+L + I I +TDSIGT N +S
Sbjct: 557 VVVLNNVFFDFNKYELKSESYPELDRLVTLLKNNNAMKIEISGYTDSIGTKSYNDKLSGR 616
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA + +YLI + I+V+ F + P+ +N T GR+ N+R+E +I +
Sbjct: 617 RAQAVATYLITKSAIDKSRITVKAFGEENPVTSNKTAKGRELNRRVEFKITNK 669
>gi|37679056|ref|NP_933665.1| flagellar motor protein MotB [Vibrio vulnificus YJ016]
gi|326423687|ref|NP_759314.2| flagellar motor rotation protein motB [Vibrio vulnificus CMCP6]
gi|37197798|dbj|BAC93636.1| flagellar motor protein [Vibrio vulnificus YJ016]
gi|319999044|gb|AAO08841.2| Flagellar motor rotation protein motB [Vibrio vulnificus CMCP6]
Length = 318
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLP 94
++ ++K + ++ + + +++ I V +G I + +F FL+ KF P
Sbjct: 150 SEAMSKEMETLMESIKKALEREIEQGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRP 209
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+++ IA ++ P + I HTD+ ++N +S +RA + + + S++
Sbjct: 210 LVRQIAELVKDVPGI-VRISGHTDNQRLDSELYRSNWDLSAQRAVSVAQEMEKVRGFSHQ 268
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ VRG A P+ NDT+ R N+R+EI I
Sbjct: 269 RLRVRGMADTDPLVDNDTEENRARNRRVEISIM 301
>gi|254283478|ref|ZP_04958446.1| OmpA family protein [gamma proteobacterium NOR51-B]
gi|219679681|gb|EED36030.1| OmpA family protein [gamma proteobacterium NOR51-B]
Length = 199
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLE 89
+ + + G LD L G+ V R D + +P SF L+
Sbjct: 26 TAAKHSPVDTDSIGYYLDVQTARL-QALAREGVSVERRDDHLLIVMPGTASFASDSALLK 84
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L +L ++T+L +F ++I I H+DS+G NL +S++RA + ++ + + +
Sbjct: 85 SNMLGLLDDLSTVLQEFNKSLIFIGGHSDSLGDSGYNLYLSRQRALAVGTH-LSKVGIDS 143
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ VRGF PI TNDT+ GR N+RIE+ ++P
Sbjct: 144 WRLVVRGFGDAKPIATNDTESGRAGNRRIELTVWP 178
>gi|269965067|ref|ZP_06179232.1| flagellar motor protein [Vibrio alginolyticus 40B]
gi|269830370|gb|EEZ84595.1| flagellar motor protein [Vibrio alginolyticus 40B]
Length = 315
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + + +++ + ++ + + +++ I V +G I +
Sbjct: 134 STQNNESAEADMQQQQSKEMSQEMETLMESIKKALEREIEQGAIEVENLGQQIVIRMREK 193
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERA 134
+F FL+ KF P+++ IA ++ P + + HTD+ ++N +S +RA
Sbjct: 194 GAFPEGSAFLQPKFRPLVRQIAELVKDVPGI-VRVSGHTDNRPLDSELYRSNWDLSSQRA 252
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + S++ + VRG A P+ ND+ R N+R+EI I
Sbjct: 253 VSVAQEMEKVRGFSHQRLRVRGMADTEPLLPNDSDDNRALNRRVEISIM 301
>gi|114776523|ref|ZP_01451568.1| putative lipoprotein [Mariprofundus ferrooxydans PV-1]
gi|114553353|gb|EAU55751.1| putative lipoprotein [Mariprofundus ferrooxydans PV-1]
Length = 223
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 5/171 (2%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ---MQLQDTGIVVSRIGDMIT 73
A+ L + +V + LD+ E + +V +
Sbjct: 49 AASTAANAGLYGGLIGAAAGFVVGETAVQYLDRQEKAVRLSKDATAGNIVVQRETPQALK 108
Query: 74 CYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ +F S L ++ L +AT+L ++ T + I HTDS GT N +S+
Sbjct: 109 LTLSRDAAFASGSNELSEQGKQTLDDVATLLKRYKKTRLTITGHTDSTGTALFNQSLSER 168
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + SY+I +GVS++R I+ G P ND+ R N+R+EI I
Sbjct: 169 RALAVASYMISKGVSADR-IASSGMGESSPAYPNDSAANRAKNRRVEILIT 218
>gi|300113742|ref|YP_003760317.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113]
gi|299539679|gb|ADJ27996.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113]
Length = 286
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 7/159 (4%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
++ K DK E + + + + V L
Sbjct: 129 EARQAKEQAKMAEVRADKLEKRLAA------LNAEKTERGYVLTLGDILFEVDSAELTSG 182
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ L + T L ++P + I+ HTDS G+ N+ +SQ RAD + + S
Sbjct: 183 GMQNLFRLVTFLKEYPDRQVVIEGHTDSTGSGVYNMELSQRRADAVYE-FLVNNGISPAR 241
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
I+ G+ YP+ N+T GRQ N+R+EI I G K
Sbjct: 242 IAAHGYGKAYPVAPNNTAAGRQKNRRVEIVILDAGKKAK 280
>gi|197116705|ref|YP_002137132.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
gi|197086065|gb|ACH37336.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
Length = 169
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 76/183 (41%), Gaps = 16/183 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ ++ + +SG A + K ++ + + G+ L ++ + +
Sbjct: 1 MFKKVAIAAVLSLMVSGVAYAGLDALKGLGKEAGKGVAASAKEGA-LSAVTNKLKKVQNE 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G + ++ + IA I+ +P + + HTD++
Sbjct: 60 KGP---------------IKFKTGKAEIDPSCDKTMTAIAAIMTDYPGFHVQVDGHTDNV 104
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + N +SQ+RAD + YL+ + + +S +GF PI N TK G+ N+R++
Sbjct: 105 GKPEANQKLSQDRADAVVKYLVDKKAVDAKRLSAKGFGDSKPIADNKTKAGQAKNRRVDF 164
Query: 181 QIF 183
+
Sbjct: 165 TVT 167
>gi|254454298|ref|ZP_05067735.1| OmpA family domain protein [Octadecabacter antarcticus 238]
gi|198268704|gb|EDY92974.1| OmpA family domain protein [Octadecabacter antarcticus 238]
Length = 219
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 47/214 (21%), Positives = 78/214 (36%), Gaps = 34/214 (15%)
Query: 5 LGLSMFIMTTISGCGLAS------REKKKVFLHKSNDTDIVNKRFGSS------------ 46
+++ + +S C + R + + + V G S
Sbjct: 8 FAVALSGVLVLSACDTVTDPNNPNRNAQTAAIVGAGLGAAVGIARGDSAGERNRGAVLGA 67
Query: 47 -------------LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKF 92
LD+ E E + Q+ + + G + +P + F L
Sbjct: 68 LVGAGLGAGVGTLLDRQEAELRQQM-GSNAQIVNTGSQLIVTLPQDILFDTGSAALSGGL 126
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L +A +N FP++ + + HTDS GT N +S RA + S LI + S I
Sbjct: 127 RSDLNALAASMNNFPNSTVNVIGHTDSDGTAAFNQDLSARRAQAVSSVLI-QSGVSANRI 185
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
G PI +N G++ N+R+EI I P G
Sbjct: 186 RSIGRGEDAPIASNLNAEGKRQNRRVEITITPNG 219
>gi|83814826|ref|YP_444492.1| OmpA family protein [Salinibacter ruber DSM 13855]
gi|83756220|gb|ABC44333.1| OmpA family protein [Salinibacter ruber DSM 13855]
Length = 230
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATIL 103
+ +D +E +L + V R+G+ I + F L + L A +
Sbjct: 75 NRMDTKAEELDEELDN--ADVERVGEGIKVTFDSGILFDFDSSTLRAEARQNLTEFAESM 132
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
F T I + HTD+ G+ + N +S RA+ +L+ RGV +R SV G P+
Sbjct: 133 QGFEDTKILVVGHTDAQGSEEYNQKLSDRRAESATRHLVDRGVDPSRLTSV-GRGETEPV 191
Query: 164 DTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+N+T+ GRQ N+R+E+ I+ ++
Sbjct: 192 ASNETEEGRQQNRRVEVAIYANEEYRE 218
>gi|317402399|gb|EFV82971.1| OmpA family protein [Achromobacter xylosoxidans C54]
Length = 232
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 75/206 (36%), Gaps = 25/206 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR------------------ 42
M+K + + ++GC + V
Sbjct: 23 MLKRIAVVAASGALLAGCATQQQTNTAVGTGAGAAVGAGIGALIGHGTGAAVGAGIGAVA 82
Query: 43 ---FGSSLDKAEDEFQMQLQDT-GIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFLPML 96
G + +D+ Q + GI V + D + IP +V + L+ LP+L
Sbjct: 83 GGLIGYNWKVVKDDVQRSGATSLGIDVVEMPDGSLKVNIPSNVSFDTDKTDLKPALLPVL 142
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A LN+ P + HTDS G L +N +S RA + + R + +SV G
Sbjct: 143 DSVARSLNQHPELRAKVVGHTDSTGALAHNQTLSVNRARSVTD-YLSRQGVAATRLSVEG 201
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
PI N T GR N+R+E+ +
Sbjct: 202 RGPSDPIGDNATAEGRALNRRVEVYL 227
>gi|325279362|ref|YP_004251904.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
20712]
gi|324311171|gb|ADY31724.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
Length = 235
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM---ITCYIPVHVSF-VSEVFLEKKFLP 94
G +DK + E ++ + + + I + F ++ L
Sbjct: 74 TGALIGRRMDKQKKEL-EAIEGAKVESVQDVNNLQAIKVTFDNGILFATNKSELSPASRE 132
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L AT L P T + I HTD+ GT N IS+ERAD + ++L+ +G+S +R ++
Sbjct: 133 ALTKFATSLKNSPDTDVTIYGHTDNTGTRAVNERISKERADAVANFLVGQGISRSR-LTT 191
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
G A+ P+ N T GR N+R+EI I ++ K
Sbjct: 192 EGLAFDQPVADNSTAEGRAQNRRVEIYITANADMIK 227
>gi|300870134|ref|YP_003785005.1| OmpA family outer membrane protein [Brachyspira pilosicoli 95/1000]
gi|300687833|gb|ADK30504.1| outer membrane protein, OmpA family [Brachyspira pilosicoli
95/1000]
Length = 401
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ + + +VV + + + + + L++ + I
Sbjct: 258 STITEEENELNRKKIEDNLNDDVVVDTVPEGLVIRLGEILFDTDSYTLKEDAKDTVDNII 317
Query: 101 TILNK-FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ + +P I ++ HTD+ G N +S++RA + Y++ + + +S RGF
Sbjct: 318 NAIKQTYPDREIIVEGHTDNTGEANYNQALSEKRAKTVADYILPK--LEHDKLSYRGFGD 375
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
K PI +ND GRQ N+R++I I
Sbjct: 376 KEPIASNDNPDGRQKNRRVDIII 398
>gi|237742388|ref|ZP_04572869.1| outer membrane porin F [Fusobacterium sp. 4_1_13]
gi|256845716|ref|ZP_05551174.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|294785038|ref|ZP_06750326.1| outer membrane porin F [Fusobacterium sp. 3_1_27]
gi|229430036|gb|EEO40248.1| outer membrane porin F [Fusobacterium sp. 4_1_13]
gi|256719275|gb|EEU32830.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|294486752|gb|EFG34114.1| outer membrane porin F [Fusobacterium sp. 3_1_27]
Length = 182
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 6/170 (3%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C KK S + V + K E + + G+ + R G+ + +P
Sbjct: 18 CSSTKTTKKTNVGVDSTNKYAVEDTEAN---KKPLEDIIVFNEEGVTIRREGNNLILSMP 74
Query: 78 VHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ F + ++ K P L +A L + I I +TD IGT NL +S +RA
Sbjct: 75 ELILFDFDKYVVKDKIKPSLSTLAKALGENKDIHIKIDGYTDFIGTEAYNLDLSVKRARA 134
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
IK +LI +G + IS+ G+ + P DTN T GR N+R+E I RG
Sbjct: 135 IKDFLISKGAIGSN-ISIEGYGEQNPADTNQTAAGRSRNRRVEF-IISRG 182
>gi|223936109|ref|ZP_03628023.1| OmpA/MotB domain protein [bacterium Ellin514]
gi|223895331|gb|EEF61778.1| OmpA/MotB domain protein [bacterium Ellin514]
Length = 280
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 4/168 (2%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
++E+ + D ++ G + EDE + L+ + +S + +T I V
Sbjct: 78 KNQEQISELQAQVADLQKEKEKVGQTAKGLEDEMRSDLESRDVTISNLKGKLTVNILDRV 137
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL---KNNLLISQERADV 136
F E ++ +L+ IATIL P I + HTD++ +N +S RA
Sbjct: 138 MFDSGEAAVKPDGESVLRKIATILAGHPELKIQVIGHTDNVPIRNRFASNWELSAARAIA 197
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++ ++ R + G+ PI N T GR N+RI I I P
Sbjct: 198 AVHFITEKAGVDPRRVGAAGYGEYRPIADNSTAEGRARNRRIAITILP 245
>gi|254228602|ref|ZP_04922026.1| Flagellar motor protein [Vibrio sp. Ex25]
gi|262395023|ref|YP_003286877.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
gi|151938781|gb|EDN57615.1| Flagellar motor protein [Vibrio sp. Ex25]
gi|262338617|gb|ACY52412.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
Length = 315
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + ++ +++ + ++ + + +++ I V +G I +
Sbjct: 134 STQNNQSAEADMQQQQSEEMSQEMETLMESIKKALEREIEQGAIEVENLGQQIVIRMREK 193
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERA 134
+F FL+ KF P+++ IA ++ P + + HTD+ ++N +S +RA
Sbjct: 194 GAFPEGSAFLQPKFRPLVRQIAELVKDVPGI-VRVSGHTDNRPLDSELYRSNWDLSSQRA 252
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + S++ + VRG A P+ ND+ R N+R+EI I
Sbjct: 253 VSVAQEMEKVRGFSHQRLRVRGMADTEPLLPNDSDENRALNRRVEISIM 301
>gi|91204077|emb|CAJ71730.1| similar to flagellar motor protein B [Candidatus Kuenenia
stuttgartiensis]
Length = 215
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 1 MIKELGLS-------MFIMTTI-SGCG------------LASREKKKVFLHKSNDTDIVN 40
M+K++GL MF M + +GCG S + + T
Sbjct: 1 MLKKVGLMRGICLLGMFGMFAVGTGCGELKQLRVENQQLSQSLASLQQENANLSATASRY 60
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLI 99
+ + L+ + + + +L TG + ++ +P + F + L ++ L+ I
Sbjct: 61 ESELNRLENSRRDLESKLAGTGAITKIKDGSVSIVLPDSILFDPGQTKLREQSKATLKKI 120
Query: 100 ATILN-KFPSTVIAIQSHTDSIGT------LKNNLLISQERADVIKSYLIQRGVSSNRFI 152
A IL + ++ I+ HTDS +N +S RA+ + YL+ S +
Sbjct: 121 AGILKTDISNEMVRIEGHTDSDPIQKQKDKYPSNWELSTARANSVLHYLVDECGISPTRV 180
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
V GF PI N TK G+ N+R+E I G
Sbjct: 181 YVAGFGQFQPISDNKTKAGKAQNRRVEFVIISGG 214
>gi|162456349|ref|YP_001618716.1| exported OmpA domain-containing protein [Sorangium cellulosum 'So
ce 56']
gi|161166931|emb|CAN98236.1| exported OmpA domain protein [Sorangium cellulosum 'So ce 56']
Length = 610
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 2/169 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S++ K + D D + + ++ R+ + +
Sbjct: 433 SKDPAKNGCPRDTDGDTFRDDVDACPREKGFADPDPEKNGCPKAVRVTEKHVVILQQVQF 492
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++ P+L +A +L + P V I IQ HTD+ GT+++N ++SQ RA+ + +
Sbjct: 493 DTDKATIKPVSDPLLDEVAEVLKEHPEIVLIEIQGHTDNRGTVEHNRILSQNRANSVMA- 551
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ R + ++ +G+ + PID N T+ GRQ N+R++ I + K
Sbjct: 552 ALVRRGIDSTRLTAQGYGREQPIDDNATEAGRQRNRRVQFNIIKKAAYK 600
>gi|312890939|ref|ZP_07750468.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311296722|gb|EFQ73862.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 252
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIAT 101
G ++DK E + + G V R G+ I + F + L+ + ++
Sbjct: 99 IGRNMDKQAAEIKNTVP--GAQVVREGEGIIVKFDSGILFDIDKTALKPVAKTNIDQLSA 156
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
L K P T I I HTD+ GT +N+ +S RA+ +K+Y I GV ++R ++ +G
Sbjct: 157 SLKKNPETNILIVGHTDNTGTAAHNMDLSVRRAEAVKAYAIAAGVDASR-LTTQGKGDTE 215
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
PI N T GR N+R+EI I +K
Sbjct: 216 PIADNTTVDGRTQNRRVEIVIVANDQMK 243
>gi|310814625|ref|YP_003962589.1| OmpA family protein [Ketogulonicigenium vulgare Y25]
gi|308753360|gb|ADO41289.1| OmpA family protein [Ketogulonicigenium vulgare Y25]
Length = 227
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ--------DT 61
++ ++G S ++ + + + G +LD+ E E Q
Sbjct: 45 AVVGALTG--DDSNDRWRNAAIGAAVGGGLGAVGGQALDRQEAELARARQEAELRQQLGG 102
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + G +T +P V F + + + L+ +A LN++P+T I++ HTDS
Sbjct: 103 NVGIVNNGQNLTVTMPQDVLFGTNSTAVSIQSQTDLRTVAASLNRYPNTSISVIGHTDST 162
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ N +S RA + S LI GV+ R +V G PI +N T GRQ N+R+EI
Sbjct: 163 GSASYNQDLSVRRAQAVASVLINGGVAPARVYTV-GRGASQPIASNATPDGRQLNRRVEI 221
Query: 181 QIFP 184
I P
Sbjct: 222 IITP 225
>gi|86134861|ref|ZP_01053443.1| OmpA family protein [Polaribacter sp. MED152]
gi|85821724|gb|EAQ42871.1| OmpA family protein [Polaribacter sp. MED152]
Length = 234
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 75/228 (32%), Gaps = 43/228 (18%)
Query: 2 IKELG-------LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR------------ 42
+K L L++ + T S C K
Sbjct: 1 MKNLTKKIYTVALALSVAFTFSSCEATKNANNKQKGAAIGAAGGAILGAIIGNNVGSGKN 60
Query: 43 ------------------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH---VS 81
G +D+ + + ++ G V R+ D I +
Sbjct: 61 SELGAVIGGVIGGGAGVLIGKRMDEQAKKIETEVP--GAKVERVDDGIVVTFDENSGVYF 118
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
++ + K L +A + +FP T I + HTD+ G NL +S++RA + +YL
Sbjct: 119 DTNKSNINTKSQQTLDRLAKVFLEFPDTKILVVGHTDNTGNADYNLTLSEKRAKSVTNYL 178
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
I ++ + P N T GR N+R+ + I P +K
Sbjct: 179 IS-DGIASPRFQTLWYGEAQPKYDNSTAEGRAKNRRVNVAIVPNEKMK 225
>gi|107023374|ref|YP_621701.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116690456|ref|YP_836079.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|170733777|ref|YP_001765724.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|254247501|ref|ZP_04940822.1| Outer membrane porin F [Burkholderia cenocepacia PC184]
gi|105893563|gb|ABF76728.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116648545|gb|ABK09186.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
gi|124872277|gb|EAY63993.1| Outer membrane porin F [Burkholderia cenocepacia PC184]
gi|169817019|gb|ACA91602.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 215
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 74/207 (35%), Gaps = 27/207 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL----------- 47
+K L + ++GC V
Sbjct: 3 MKIATRLSVFALAGALLAGCATQQGNNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGA 62
Query: 48 ----------DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKFLPM 95
+++ TG V+ D + +P V+F + + F P+
Sbjct: 63 LVGGVTGYNWQAIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPL 122
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +AT LN+ P +I +TDS G+ + N +SQ RA + + + + + +S +
Sbjct: 123 LNDLATTLNQNPQVTASIVGYTDSTGSQQLNQTLSQNRAQSVVN-ALVQRGVNGGRLSAQ 181
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI N T+ GR N+R+EI +
Sbjct: 182 GMGPSNPIADNATEAGRAQNRRVEIYL 208
>gi|71909465|ref|YP_287052.1| surface antigen protein [Dechloromonas aromatica RCB]
gi|71849086|gb|AAZ48582.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Dechloromonas
aromatica RCB]
Length = 221
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 3/174 (1%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
++ T++ G R + + + + + + Q TGI V++ D
Sbjct: 44 LLGTVTAGGNKGRSAATGAAVGAALGAGGGYLWSRHMQEQKAAMEQATQGTGIGVTQTAD 103
Query: 71 M-ITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ IP +SF S + +L A+ L + P T + I HTD++G N
Sbjct: 104 NQLKLDIPSDLSFDSGHYDINPALHAVLDRFASTLIQNPVTHVRIVGHTDNVGGDAINNP 163
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S RA + YL R ++ IS+ G PI N T GR N+R+EI +
Sbjct: 164 LSVNRAAATRDYLASR-GVASNRISIDGRGSHEPIADNSTPAGRAKNRRVEIFV 216
>gi|323495111|ref|ZP_08100198.1| flagellar motor protein MotB [Vibrio brasiliensis LMG 20546]
gi|323310662|gb|EGA63839.1| flagellar motor protein MotB [Vibrio brasiliensis LMG 20546]
Length = 314
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ ++ + +++ + ++ + + +++ I V +G I I
Sbjct: 133 STQNNQNSESDNEQQQSAEMSQELETLMESIKKALEREIEQGAIEVENLGQQIDIRIREK 192
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERA 134
+F FL+ KF P+++ IA ++ P V+ + HTD+ ++N +S +RA
Sbjct: 193 GAFPEGSAFLQPKFRPLVRQIADLVKDIPG-VVRVSGHTDNQRIDSELYRSNWDLSAQRA 251
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + + ++ + VRG A P+ NDT+ R N+R+EI I ++
Sbjct: 252 VSVAQEMEKVRGFNHERLRVRGMADTEPLGPNDTEAQRSRNRRVEISIMQGEALQ 306
>gi|257453597|ref|ZP_05618887.1| OmpA/MotB [Enhydrobacter aerosaccus SK60]
gi|257449055|gb|EEV24008.1| OmpA/MotB [Enhydrobacter aerosaccus SK60]
Length = 385
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 6/184 (3%)
Query: 6 GLSMFIMTTISGC----GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQD 60
GL++ + + G E V D D +S+DK + +
Sbjct: 186 GLALAGLNVVLGGHLAPAAPVVEPTPVEPIVVTDGDDDQDGVPNSVDKCPGTPLNVVVDA 245
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G D + ++ ++ P +Q +A +N++P++ +I+ H
Sbjct: 246 DGCPREIPIDDALRMELRVFFDNDKTVIKDQYKPEIQKVAEKMNEYPNSTASIEGHASKT 305
Query: 121 GT-LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G + N +S+ RA+ +KS L+ + + + IS G+ Y PI N+T GR N+R+
Sbjct: 306 GPSARYNQRLSEARANAVKSMLVNQFGVAPQRISTVGYGYDRPIADNNTAEGRAMNRRVY 365
Query: 180 IQIF 183
I
Sbjct: 366 AIIT 369
>gi|53804092|ref|YP_114257.1| OmpA domain-containing protein [Methylococcus capsulatus str. Bath]
gi|53757853|gb|AAU92144.1| OmpA domain protein [Methylococcus capsulatus str. Bath]
Length = 179
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 75/192 (39%), Gaps = 25/192 (13%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ ++ +SGC + S + V + ++ + +++
Sbjct: 1 MVKKFATTVLTAGVLSGCVMQSTYDRDVG----------------YERQLNEQLRTEVEA 44
Query: 61 TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + ++ D + + + F + K+ + I L + I ++ HTD+
Sbjct: 45 DEVKIQQLRDRLRVTMEDELLFPEGGYQISKEGKASIDKIIPTLQSATNHRIEVEGHTDN 104
Query: 120 IG-------TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+ +N +S RA + YL +G+ R + G P+ +N T G+
Sbjct: 105 VPIGKHLAHRFSSNWELSAGRACEVVKYLQSKGIDPARM-TAAGHGEYQPVASNATAEGK 163
Query: 173 QNNQRIEIQIFP 184
N+RI+I + P
Sbjct: 164 AQNRRIDIDLVP 175
>gi|146281899|ref|YP_001172052.1| putative outer membrane protein [Pseudomonas stutzeri A1501]
gi|145570104|gb|ABP79210.1| putative outer membrane protein [Pseudomonas stutzeri A1501]
Length = 229
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 8/187 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + M I+GC +K + K + LD+ E + + L D+
Sbjct: 25 KSASLILCMIVIAGCSSKGEKK-----PSEAAAPVAPKVDYAWLDEYEPKLRDALVDSRF 79
Query: 64 VVSRIGDMITCYIPVHVSFVSEV--FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
V R +++ PV SF + L L + +A ++ K T + I H DS G
Sbjct: 80 EVERRDNVLVVTAPVDSSFNPDRPGMLLPVTLGPITRVAKLVEKDEKTAVVILGHADSTG 139
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N IS+ERA + + G +R + +RG P ND+K GR N+R+E+
Sbjct: 140 ADDVNRTISRERASAVAAIFRLSGFKHDR-LRIRGLGSDMPRAANDSKEGRAMNRRVEMV 198
Query: 182 IFPRGNI 188
+ P+ +
Sbjct: 199 LAPQTTM 205
>gi|298372336|ref|ZP_06982326.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298275240|gb|EFI16791.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 705
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 67/174 (38%), Gaps = 2/174 (1%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY-I 76
C +E + + D D+ ++ V + + +
Sbjct: 531 CPNTPKEVRGLVDENGCPKDTDGDGIPDYKDECPTIKGVKENKGCPAVKKDVLKVFKQAL 590
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ +L ++ I+ P + I HTDS G N+ +S +RA
Sbjct: 591 HGIQFDTGKSTIKSVSYGVLNMVVDIMKNNPDYNLVIAGHTDSQGNDDFNMTLSDKRAAA 650
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
++ YLI +GV R S+ G+ P+ TN T GR N+R+E + +K+
Sbjct: 651 VRQYLIDKGVEDARLQSI-GYGETKPVATNKTAKGRAQNRRVEFTVVFEKLVKE 703
>gi|254438169|ref|ZP_05051663.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198253615|gb|EDY77929.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 220
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 77/221 (34%), Gaps = 38/221 (17%)
Query: 1 MIK----ELGLSMFIMTTISGCGLA--SREKKKVFLHKSNDTDIVNKRFG---------- 44
M+ +++ + +S C + + + G
Sbjct: 1 MMTLSKMSFAVALSGVLVLSACETVTDPNNPNRNAQTAAIVGAGLGAAIGIARGDDAGER 60
Query: 45 -------------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-S 84
+ LD+ E E + ++ + + G + +P + F
Sbjct: 61 NRGAIVGALIGAGVGGGLGTLLDRQEAELRQEM-GSSAQIVNTGSQLIVTLPQDILFDTG 119
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L L +A +N+FP++ + + HTD G+ N +S RA + + LI +
Sbjct: 120 SSALTGGLRNDLNTLAGSMNRFPNSTVNVIGHTDWDGSAAFNQDLSARRAQAVSAVLI-Q 178
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ I G PI TN + G++ N+R+EI I P
Sbjct: 179 SGVAPNRIRSIGRGEDAPIATNLNEEGKRQNRRVEITITPN 219
>gi|197105040|ref|YP_002130417.1| outer membrane protein [Phenylobacterium zucineum HLK1]
gi|196478460|gb|ACG77988.1| outer membrane protein [Phenylobacterium zucineum HLK1]
Length = 190
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 71/181 (39%), Gaps = 10/181 (5%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
G+ + +SGC + +V + + T + A + +
Sbjct: 19 TGVLLLAGVAVSGCASHRFVRDQVAVVDTRVTGVEG--------TAGEALARANAAHKLA 70
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTL 123
+ + V L + L +A L + + + IQ HTDS G
Sbjct: 71 EGKFLYQVVLSDDSVKFPVDRHALSPEAEARLNELAERLKSENRNVYLEIQGHTDSTGPE 130
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N + + RA+ ++ +L + GV+ NR ++ + + P+ +NDT GR N+R+EI +
Sbjct: 131 AYNDQLGEARAEAVRKHLAKAGVALNRMGTIS-YGEEAPVASNDTAEGRAQNRRVEIIVL 189
Query: 184 P 184
Sbjct: 190 S 190
>gi|167561951|ref|ZP_02354867.1| ompA family protein [Burkholderia oklahomensis EO147]
gi|167569201|ref|ZP_02362075.1| ompA family protein [Burkholderia oklahomensis C6786]
Length = 215
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 79/202 (39%), Gaps = 24/202 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL---------------- 47
L + ++GC V
Sbjct: 8 RLSVFALAGALLAGCATPQGTNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGALVGGV 67
Query: 48 -----DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFLEKKFLPMLQLIA 100
+++ Q TG V+ D + +P V+F + + F P+L +A
Sbjct: 68 TGYNWQAIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAVTPAFTPLLNDLA 127
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ LN+ P ++ +TDS G+ +N +SQ RA + + + QRGV+++R +S +G
Sbjct: 128 STLNQNPQITASVVGYTDSTGSAAHNQTLSQNRAQSVVNAMSQRGVAASR-LSAQGMGAS 186
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
PI N T+ GR N+R+EI +
Sbjct: 187 NPIADNATEAGRAQNRRVEIYL 208
>gi|260776526|ref|ZP_05885421.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607749|gb|EEX34014.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
BAA-450]
Length = 300
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + + +++ + ++ + + +++ I V +G I I
Sbjct: 116 STQDSQNSESDSEQQQSAELSQELETLMESIKKALEREIEQGAIEVENLGQQIDIRIREK 175
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERA 134
+F FL+ KF P+++ IA ++ P + + HTD+ ++N +S +RA
Sbjct: 176 GAFPEGSAFLQPKFRPLVRQIAELVKDIPGI-VRVSGHTDNQRIDSELYRSNWDLSAQRA 234
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + S++ + VRG A P+ NDT+ R N+R+EI I
Sbjct: 235 VSVAQEMEKVRDFSHQRLQVRGMADTQPLGPNDTEAQRSRNRRVEISIM 283
>gi|260773298|ref|ZP_05882214.1| Flagellar motor rotation protein MotB [Vibrio metschnikovii CIP
69.14]
gi|260612437|gb|EEX37640.1| Flagellar motor rotation protein MotB [Vibrio metschnikovii CIP
69.14]
Length = 314
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 74/170 (43%), Gaps = 6/170 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + + ++ +++ L+ + +++ + V +G I I
Sbjct: 132 STEDSQDNEDAEQEQEQSEALSEEMEIVLENIKKALDREIEQGAVEVENLGQQILIRIRE 191
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQER 133
+F FL+ +F P+++ IA ++ P + + HTD+ ++N +S +R
Sbjct: 192 RGAFPEGSAFLQPQFRPLVRQIAELVKDVPGI-VQVTGHTDNQRLDSELYRSNWDLSAQR 250
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + +R + VRG A P+ NDT+ R N+R+EI I
Sbjct: 251 AVSVAQEMERVTGFDHRRLEVRGLADTAPVGPNDTEAQRSRNRRVEIGIM 300
>gi|167580182|ref|ZP_02373056.1| ompA family protein [Burkholderia thailandensis TXDOH]
gi|257139912|ref|ZP_05588174.1| ompA family protein [Burkholderia thailandensis E264]
Length = 215
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 73/202 (36%), Gaps = 24/202 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL---------------- 47
L + ++GC V
Sbjct: 8 RLSVFALAGALLAGCATQQGTNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGALVGGV 67
Query: 48 -----DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFLEKKFLPMLQLIA 100
+++ Q TG V+ D + +P V+F + + F P+L +A
Sbjct: 68 TGYNWQAIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAVTPAFTPLLNDLA 127
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
T LN+ P ++ +TDS G+ +N +SQ RA + + + + + +S +G
Sbjct: 128 TTLNQNPQITASVVGYTDSTGSAAHNQTLSQNRAQSVVN-ALAQRGVAATRLSAQGMGAS 186
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
PI N T+ GR N+R+EI +
Sbjct: 187 NPIADNATEAGRAQNRRVEIYL 208
>gi|296328018|ref|ZP_06870553.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154974|gb|EFG95756.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 182
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C KK S + V + K E + + G+ + R G+ + +P
Sbjct: 18 CSSTKTTKKTNVGVDSTNKYAVEDTEAN---KKPLEDIIVFNEEGVTIRREGNNLILSMP 74
Query: 78 VHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ F + ++ P L +A L + I I +TD IGT NL +S +RA
Sbjct: 75 ELILFDFDKYAVKDGIKPSLSTLAKALGENKDIHIKIDGYTDFIGTEAYNLDLSVKRARA 134
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
IK +LI +G + IS+ G+ + P DTN T GR N+R+E I RG
Sbjct: 135 IKDFLISKGAIGSN-ISIEGYGEQNPADTNQTAAGRSRNRRVEF-IISRG 182
>gi|295132150|ref|YP_003582826.1| thrombospondin repeat-containing OmpA/MotB family outer
hypothetical protein [Zunongwangia profunda SM-A87]
gi|294980165|gb|ADF50630.1| thrombospondin repeat-containing OmpA/MotB family outer membrane
protein [Zunongwangia profunda SM-A87]
Length = 470
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V + + ++ + + E +L + V
Sbjct: 309 GCPYEDTDGDGVIDPEDDCPEVAGTVANNGCPEPTVEVINELNEYSNTV----------- 357
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ + + L I I+ ++P+TV I HTDS+G+ + NL +S+ERA
Sbjct: 358 ---LFDFNKATIRSESEKALNSIIEIMEEYPNTVFHIGGHTDSVGSDEYNLKLSKERAAS 414
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
++ +L+ ++ G+ PI TN T+ GRQ N+R+EI + +K
Sbjct: 415 VRQFLVDG-GIPANRLTSEGYGESRPIATNSTEAGRQENRRVEISLDKDKEMK 466
>gi|120613225|ref|YP_972903.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120591689|gb|ABM35129.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
Length = 296
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ + E + + I + + + + ++ L + P L +
Sbjct: 151 AADNAARVRALEAQLRD------IEAQQTERGLLVTLGDVLFAFNKAELSAQAGPRLDKL 204
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A L +FP + I+ HTDS+G N +S+ RA + + + + I+ RG+
Sbjct: 205 ANFLRQFPDRKLIIEGHTDSVGGDAYNQSLSERRAQAV-QSALVQRGVAPDRITARGYGK 263
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF-PRGNIK 189
YP+ N + GR N+R+EI I +GN++
Sbjct: 264 TYPVADNSSPEGRAMNRRVEIVIADEKGNLR 294
>gi|262172094|ref|ZP_06039772.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451]
gi|261893170|gb|EEY39156.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451]
Length = 279
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 73/173 (42%), Gaps = 6/173 (3%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
S + + ++++ + + + +++ I V +G I
Sbjct: 89 SAESSTQDNQNTQSEMQQQQAKAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIR 148
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLIS 130
I +F FL+ KF P+++ IA ++ P + + HTD+ ++N +S
Sbjct: 149 IREKGAFPEGSAFLQPKFRPLVRQIADLVKDIPG-KVRVTGHTDNQKLDSELYRSNWDLS 207
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA + + + ++ + VRG A PI NDT+ R N+R+EI I
Sbjct: 208 AQRAVSVAQEMEKVKGFDHQRLQVRGMADTQPIGPNDTEAQRALNRRVEISIL 260
>gi|296127617|ref|YP_003634869.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
gi|296019433|gb|ADG72670.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
Length = 403
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 4/140 (2%)
Query: 45 SSLDKAEDEFQMQL-QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
D + + L D + + + + + + + L + + I +
Sbjct: 263 EEEDYNRKKLENDLYDDDNVTIDTVPEGLVVRLGEILFDTDSYTLRPEAKNTIDNIVKAI 322
Query: 104 NK-FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ +P I ++ HTD+ G + N +S++RA + Y++ + +S +G A + P
Sbjct: 323 KETYPDREIIVEGHTDNTGRKEYNQELSEKRAKSVADYILPN--LEHDKLSYKGLADEEP 380
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
I +NDT GRQ N+R++I I
Sbjct: 381 IASNDTADGRQKNRRVDIII 400
>gi|206560984|ref|YP_002231749.1| putative OmpA family membrane protein [Burkholderia cenocepacia
J2315]
gi|198037026|emb|CAR52947.1| putative OmpA family membrane protein [Burkholderia cenocepacia
J2315]
Length = 215
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 74/207 (35%), Gaps = 27/207 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL----------- 47
+K L + ++GC V
Sbjct: 3 MKIATRLSVFALAGALLAGCATQQGNNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGA 62
Query: 48 ----------DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKFLPM 95
+++ TG V+ D + +P V+F + + F P+
Sbjct: 63 LVGGVTGYNWQAIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPL 122
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +AT LN+ P +I +TDS G+ + N +SQ RA + + + + + +S +
Sbjct: 123 LNDLATTLNQNPQVTASIVGYTDSTGSAQLNQTLSQNRAQSVVN-ALVQRGVNGGRLSAQ 181
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI N T+ GR N+R+EI +
Sbjct: 182 GMGASNPIADNATEAGRAQNRRVEIYL 208
>gi|167909987|ref|ZP_02497078.1| ompA family protein [Burkholderia pseudomallei 112]
gi|254199385|ref|ZP_04905751.1| OmpA family protein [Burkholderia mallei FMH]
gi|254205699|ref|ZP_04912051.1| OmpA family protein [Burkholderia mallei JHU]
gi|147748981|gb|EDK56055.1| OmpA family protein [Burkholderia mallei FMH]
gi|147753142|gb|EDK60207.1| OmpA family protein [Burkholderia mallei JHU]
Length = 207
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 71/197 (36%), Gaps = 24/197 (12%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL--------------------- 47
++GC V
Sbjct: 5 ALAGALLAGCATQQGTNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGALVGGVTGYNW 64
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNK 105
+++ Q TG V+ D + +P V+F + + F P+L +AT LN+
Sbjct: 65 QAIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFTPLLNDLATTLNQ 124
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P ++ +TDS G+ +N +SQ RA + + + + + +S +G PI
Sbjct: 125 NPQITASVVGYTDSTGSAAHNQTLSQNRAQSVVN-ALAQRGVAANRLSAQGMGASNPIAD 183
Query: 166 NDTKVGRQNNQRIEIQI 182
N T+ GR N+R+EI +
Sbjct: 184 NATEAGRAQNRRVEIYL 200
>gi|28897464|ref|NP_797069.1| flagellar motor protein MotB [Vibrio parahaemolyticus RIMD 2210633]
gi|153840267|ref|ZP_01992934.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810]
gi|260876424|ref|ZP_05888779.1| flagellar motor protein MotB [Vibrio parahaemolyticus AN-5034]
gi|28805676|dbj|BAC58953.1| sodium-driven polar flagellar protein MotB [Vibrio parahaemolyticus
RIMD 2210633]
gi|149746069|gb|EDM57199.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810]
gi|308092849|gb|EFO42544.1| flagellar motor protein MotB [Vibrio parahaemolyticus AN-5034]
gi|328472526|gb|EGF43389.1| flagellar motor protein MotB [Vibrio parahaemolyticus 10329]
Length = 315
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + ++ +++ + ++ + + +++ I V +G I +
Sbjct: 134 STQSNQSAESDMQQQQSEEMSQEMETLMESIKKALEREIEQGAIEVENLGQQIVIRMREK 193
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERA 134
+F FL+ KF P+++ IA ++ P + I HTD+ ++N +S +RA
Sbjct: 194 GAFPEGSAFLQPKFRPLVRQIAELVKDVPGI-VRISGHTDNQRLDSELYRSNWDLSSQRA 252
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + S++ + VRG A P+ ND+ R N+R+EI I
Sbjct: 253 VSVAQEMEKVRGFSHQRLRVRGMADTEPLVPNDSDENRALNRRVEISIM 301
>gi|332886461|gb|EGK06705.1| hypothetical protein HMPREF9456_00579 [Dysgonomonas mossii DSM
22836]
Length = 224
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/212 (20%), Positives = 76/212 (35%), Gaps = 29/212 (13%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTD--------------------------IV 39
+ + +S CG ++ K +
Sbjct: 9 AIVLSCALLLSSCGASNTVKGGGIGAGAGGALGAGIGAIIGGGKGAAWGAGIGAVVGGSA 68
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ-L 98
G+ +DK + E Q+ + G I + F +
Sbjct: 69 GAIIGNKMDKQKKEL-EQINGAQVESINDGQAIKVTFESGILFATNSSTLSSASQSALSN 127
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
A LN P T + I HTD+ G+ N +S++RA + ++L +GVS +R +S +GF
Sbjct: 128 FAASLNNNPDTDVQIYGHTDNTGSDAINNPLSEKRAQAVYNFLQTKGVSGSRMVS-QGFG 186
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
P+ N + GR N+R+E+ I P + K
Sbjct: 187 STQPVADNSSVAGRAQNRRVEVYILPNEKMLK 218
>gi|78067236|ref|YP_370005.1| OmpA/MotB family protein [Burkholderia sp. 383]
gi|77967981|gb|ABB09361.1| OmpA/MotB family protein [Burkholderia sp. 383]
Length = 214
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 74/207 (35%), Gaps = 27/207 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL----------- 47
+K L + ++GC V
Sbjct: 3 MKIATRLSVFALAGALLAGCATQQGNNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGA 62
Query: 48 ----------DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKFLPM 95
+++ TG V+ D + +P V+F + + F P+
Sbjct: 63 LVGGVTGYNWQAIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFQPL 122
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +AT LN+ P +I +TDS G+ + N +SQ RA + + + + + +S +
Sbjct: 123 LNDLATTLNQNPQVTASIVGYTDSTGSAQLNQTLSQNRAQSVVN-ALAQRGVNGGRLSAQ 181
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI N T+ GR N+R+EI +
Sbjct: 182 GMGASNPIADNATEAGRAQNRRVEIYL 208
>gi|311067881|ref|YP_003972804.1| flagellar motor protein MotB [Bacillus atrophaeus 1942]
gi|310868398|gb|ADP31873.1| flagellar motor protein MotB [Bacillus atrophaeus 1942]
Length = 262
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 5/159 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKK 91
+ D + + + + + + + + + + I + F + + ++
Sbjct: 96 AADKTADQEELENVEKQVKQFIKDKKLENQLETKLTDEGLLITIKDSIFFDSGKATIREQ 155
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVS 147
+P+ + I+ +L P I I HTD++ ++N +S RA LI+
Sbjct: 156 DIPLAEEISDLLVLNPPRNIIISGHTDNMPIKNSQFQSNWHLSVMRAVNFMGLLIENPKL 215
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ S +GF P+ TNDT GR N+R+E+ I PRG
Sbjct: 216 DAKVFSAKGFGEYKPVATNDTAEGRSKNRRVEVLILPRG 254
>gi|114769969|ref|ZP_01447579.1| OmpA domain protein [alpha proteobacterium HTCC2255]
gi|114549674|gb|EAU52556.1| OmpA domain protein [alpha proteobacterium HTCC2255]
Length = 210
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 23/192 (11%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVN---------------------KRFGSSLDKAEDE 53
+S C K+ + + + G+ LD E+E
Sbjct: 1 MSACTDNPYNAKQGAIIGATAGIMSGFLTGDDSNGTIKRAIAGGALGAAIGNELDVQEEE 60
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ L+ +G ++ G+ + +P ++F + L ++ LNK+P T +
Sbjct: 61 LRKNLEGSGALIKNTGNQLIVTLPEAITFDIDSSEVRYSLEDTLIRLSKSLNKYPKTNVE 120
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTD++G N +S RA+ + S L Q VS +R I G P+ +N++ GR
Sbjct: 121 IIGHTDNVGGQDYNQKLSTRRAESVSSILAQNDVSRSR-IKAYGRGEIEPMMSNNSSKGR 179
Query: 173 QNNQRIEIQIFP 184
+N+R+EI I P
Sbjct: 180 ASNRRVEIMITP 191
>gi|313203319|ref|YP_004041976.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312442635|gb|ADQ78991.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 817
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 2/167 (1%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY-I 76
C E + D LDK + + + + + +
Sbjct: 645 CPNTPIEARGKVDQNGCPRDTDGDGIPDYLDKCPTIAGVAENEGCPAIKKEVKTLFKKAL 704
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ K P+L IA ++ P+ +I ++ HTD++G K N ++SQ+RA+
Sbjct: 705 QGIQFETGKDKIKPKSYPILNQIAAVMTANPTYLIEVRGHTDNVGDAKLNQVLSQKRAES 764
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++ YLI + ++ ++ G+ P+ TN T GR N+R+E +I
Sbjct: 765 VRKYLIGK-GIDSKRMTANGYGDTLPVSTNSTPAGRTLNRRVEFEIT 810
>gi|254787924|ref|YP_003075353.1| OmpA/MotB domain-containing protein [Teredinibacter turnerae T7901]
gi|237683974|gb|ACR11238.1| OmpA/MotB domain protein [Teredinibacter turnerae T7901]
Length = 304
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ + +S+++ + +L+ + + + + E ++
Sbjct: 142 AAEQRAEMAVARANSMEEKASQMASKLES--VTTKLDKRGLVITMGDILFATDESEVKPG 199
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ L+ ++ +L ++P I ++ TDS G N +S+ RA+ + L+ G++ +R
Sbjct: 200 AVRTLEKVSDLLAEYPDREILVEGFTDSTGAADYNKNLSERRAEAVVKQLVDNGLAEDR- 258
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S +G+ +YP+ +NDT GRQ N+R+E+ + + +
Sbjct: 259 LSAKGYGEEYPVASNDTAAGRQQNRRVELVVANKDD 294
>gi|153003419|ref|YP_001377744.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152026992|gb|ABS24760.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 205
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/198 (23%), Positives = 77/198 (38%), Gaps = 27/198 (13%)
Query: 6 GLSMFIMTTISGCGLASR--------------------EKKKVFLHKSNDTDIVNKRFGS 45
+++ + T+ GCG A + KK L + + G
Sbjct: 8 VIALATLVTLIGCGTAGKRTAIGGGAGAALGAGIGALAGGKKGALIGAGVGALAGGSVGL 67
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILN 104
LDK E + R + I + + F + L+ + + L + IL
Sbjct: 68 YLDKQHKELEKV-----AETKRTENGILVNMKNDILFDTNSADLKGEAVTQLTQVGDILA 122
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
K+ I I+ HTDS G+ N +S++RAD + ++ I+V G PI
Sbjct: 123 KYADDRIRIEGHTDSSGSDSLNEALSRKRADSV-RTVLVSRGVREEQITVVGNGETKPIA 181
Query: 165 TNDTKVGRQNNQRIEIQI 182
N TK GR N+R+E+ I
Sbjct: 182 DNATKEGRAKNRRVELHI 199
>gi|260438796|ref|ZP_05792612.1| putative chemotaxis protein MotB [Butyrivibrio crossotus DSM 2876]
gi|292808785|gb|EFF67990.1| putative chemotaxis protein MotB [Butyrivibrio crossotus DSM 2876]
Length = 265
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 66/171 (38%), Gaps = 6/171 (3%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G +K ++ + K DK E+ Q I V + +
Sbjct: 90 GASDDDSDKSEIDKAQDLIGKEELKDSEQMGDKIENLLDKMGQSNNIEVQVTQHYVCLNM 149
Query: 77 PVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL----LISQ 131
+ F S L +L +A IL + +I I+ HTD++ + ++S
Sbjct: 150 KGALLFNSASATLTSDAEKVLSDVAVILKMYEDNLIEIEGHTDNVPINWDIFTSNNVLSD 209
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + +L+ + S + G PI +NDT GR N+R+EI+I
Sbjct: 210 YRALAVFDFLVDK-GISPVKLKHSGRGEYNPIASNDTAEGRAQNRRVEIKI 259
>gi|153835783|ref|ZP_01988450.1| PomB [Vibrio harveyi HY01]
gi|148867501|gb|EDL66863.1| PomB [Vibrio harveyi HY01]
Length = 314
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNK 105
++ + + +++ I V +G I + +F FL+ KF P+++ IA ++
Sbjct: 160 MESIKKALEREIEQGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKD 219
Query: 106 FPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P + + HTD+ ++N +S +RA + + + S++ + VRG A
Sbjct: 220 VPGI-VRVSGHTDNQPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTE 278
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
P+ ND+ R N+R+EI I
Sbjct: 279 PLAPNDSDANRALNRRVEISIM 300
>gi|320157195|ref|YP_004189574.1| flagellar motor rotation protein MotB [Vibrio vulnificus MO6-24/O]
gi|319932507|gb|ADV87371.1| flagellar motor rotation protein MotB [Vibrio vulnificus MO6-24/O]
Length = 300
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLP 94
++ ++K + ++ + + +++ I V +G I + +F FL+ KF P
Sbjct: 132 SEAMSKEMETLMESIKKALEREIEQGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRP 191
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+++ IA ++ P + I HTD+ ++N +S +RA + + + S++
Sbjct: 192 LVRQIAELVKDVPGI-VRISGHTDNQRLDSELYRSNWDLSAQRAVSVAQEMEKVRGFSHQ 250
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ VRG A P+ NDT+ R N+R+EI I
Sbjct: 251 RLRVRGMADTDPLVDNDTEENRARNRRVEISIM 283
>gi|83720098|ref|YP_441413.1| ompA family protein [Burkholderia thailandensis E264]
gi|83653923|gb|ABC37986.1| ompA family protein [Burkholderia thailandensis E264]
Length = 261
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 73/202 (36%), Gaps = 24/202 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL---------------- 47
L + ++GC V
Sbjct: 54 RLSVFALAGALLAGCATQQGTNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGALVGGV 113
Query: 48 -----DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFLEKKFLPMLQLIA 100
+++ Q TG V+ D + +P V+F + + F P+L +A
Sbjct: 114 TGYNWQAIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAVTPAFTPLLNDLA 173
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
T LN+ P ++ +TDS G+ +N +SQ RA + + + + + +S +G
Sbjct: 174 TTLNQNPQITASVVGYTDSTGSAAHNQTLSQNRAQSVVN-ALAQRGVAATRLSAQGMGAS 232
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
PI N T+ GR N+R+EI +
Sbjct: 233 NPIADNATEAGRAQNRRVEIYL 254
>gi|156973487|ref|YP_001444394.1| flagellar motor protein MotB [Vibrio harveyi ATCC BAA-1116]
gi|156525081|gb|ABU70167.1| hypothetical protein VIBHAR_01177 [Vibrio harveyi ATCC BAA-1116]
Length = 314
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNK 105
++ + + +++ I V +G I + +F FL+ KF P+++ IA ++
Sbjct: 160 MESIKKALEREIEQGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKD 219
Query: 106 FPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P + + HTD+ ++N +S +RA + + + S++ + VRG A
Sbjct: 220 VPGI-VRVSGHTDNQPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTE 278
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
P+ ND+ R N+R+EI I
Sbjct: 279 PLAPNDSDANRALNRRVEISIM 300
>gi|162448390|ref|YP_001610757.1| putative ompA family protein [Sorangium cellulosum 'So ce 56']
gi|161158972|emb|CAN90277.1| putative ompA family protein [Sorangium cellulosum 'So ce 56']
Length = 617
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 70/170 (41%), Gaps = 2/170 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ + D D V + D+ ++ V R+ + +
Sbjct: 445 TSDPATNGCPGDRDGDTVRDDQDACPDEKGKPDPDPTKNGCPVAVRMTETEIVILQQVQF 504
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++K P+L +A +L + P T I +Q HTD G N+ +SQ RA+ +
Sbjct: 505 DTGKATIKKVSDPLLDEVAGVLKEHPEITKIEVQGHTDPRGGRAYNIKLSQARAESVTK- 563
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + ++ +G+ PI NDT GRQ N+R++ +I + ++
Sbjct: 564 ALVQRGIEAERLASKGYGPDVPIAENDTDEGRQKNRRVQFKILEKKPKQQ 613
>gi|78224724|ref|YP_386471.1| OmpA/MotB [Geobacter metallireducens GS-15]
gi|78195979|gb|ABB33746.1| OmpA/MotB [Geobacter metallireducens GS-15]
Length = 193
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 67/193 (34%), Gaps = 11/193 (5%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHK-SNDTDIVNKRFGSSLDKAEDEFQM 56
M K L + +GC K + + + + + K E
Sbjct: 1 MRKCTFGLVALLCFGLVAAGCAKKEMVKPEEAVPPVAAPQPTTPAKPAAPPVKEEPIAAQ 60
Query: 57 QLQDTGIVVSRIG-----DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL-NKFPSTV 110
+ + + + D +T + L + +L A L K P+
Sbjct: 61 PIPEAPVKTETLQPATALDTVTATLDRIFFDFDSFVLSQAARDILSKNAEYLLKKQPNAR 120
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ I+ H D G+ + NL + ++RA + YL+ + +S+ + + P+D T+
Sbjct: 121 VLIEGHCDERGSDEYNLALGEKRAKAARDYLVTL-GVAANRLSIISYGEEKPLDPGHTEE 179
Query: 171 GRQNNQRIEIQIF 183
N+R E I
Sbjct: 180 AWAKNRRAEFLIV 192
>gi|319787865|ref|YP_004147340.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
gi|317466377|gb|ADV28109.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
Length = 369
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 6/151 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
G ++ +D+ I ++ + + L + +L
Sbjct: 217 ADLDDDGDGVNNCDDKCPGSQAGQAIGPDGCPVPVSIDLKGVNFDYDKATLRPDAVAILS 276
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
A IL ++P + + HTDS GT N +S+ RA + YL G+ ++R + G+
Sbjct: 277 EAAEILKRYPDLRVEVAGHTDSRGTDAYNQKLSERRAKAVYDYLTSNGIDASRLVGPIGY 336
Query: 158 AYKYPIDTN------DTKVGRQNNQRIEIQI 182
PI N D GR N+R E+ +
Sbjct: 337 GESRPIAPNANPDGSDNPEGRAKNRRTELNV 367
>gi|311697206|gb|ADQ00078.1| secreted protein containing outer membrane protein, OmpA/MotB,
C-terminal domain [marine bacterium HP15]
Length = 366
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D LDK D L D+ + I + V + + ++ +F P +
Sbjct: 209 DTDGDGVIDDLDKCPDTPMGALVDSDGCPKELTKDIKETLYVE-FDLDKTEVKPQFYPEI 267
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A +L ++P++ I ++ HTDS G+ N +S+ RAD + LI R + IS G
Sbjct: 268 GELAKVLKQYPTSTILLEGHTDSTGSASYNQQLSKSRADAVMKVLIDRFSIPSTRISTTG 327
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
PI +N T GR N+R+E +
Sbjct: 328 MGESQPIASNATVEGRAQNRRVEAIV 353
>gi|306820125|ref|ZP_07453773.1| chemotaxis protein MotB [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551903|gb|EFM39846.1| chemotaxis protein MotB [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 250
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 70/178 (39%), Gaps = 7/178 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
++ +K + + + F + ++ + + I +S + +
Sbjct: 67 SSENKIEKGSVFEGQSSSVAESNNFEKMEKQIKEYLEENKLEKQISISNEEEGLVLRFQD 126
Query: 79 H-VSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGT----LKNNLLISQ 131
+ L+ + +L+ + IL F ++++ HTD++ ++N +S
Sbjct: 127 SSLFDQGSATLKPQSYNVLKYVGGILKSKNFKDKFVSVEGHTDNVPISTSTHQSNWELSS 186
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA + YLI+ + +S G+ +P+ NDT N+R++I I + K
Sbjct: 187 NRASNVVRYLIENQGIDPKRLSTAGYGEYHPVAPNDTPANMAKNRRVDIMILRTKDSK 244
>gi|332662636|ref|YP_004445424.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332331450|gb|AEE48551.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 550
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 12/180 (6%)
Query: 17 GCGLASRE---KKKVFLHKSND-------TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
GC + K D N LDK F + + +
Sbjct: 372 GCPDKDNDGVLDKDDACPDIAGLKQFNGCPDTDNDGIEDRLDKCPTTFGLSSNNGCPEIK 431
Query: 67 RIGDMIT-CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + + L L +L +A I+N++P ++ + HTD++G
Sbjct: 432 AEDKAVLAFAMSNVNFETNSAKLLASSLEVLDKVAEIMNRYPDFMLYMDGHTDNVGEEAT 491
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
NL +S+ R +YL + S I +GF P+ N T GR+ N+R+E ++ P+
Sbjct: 492 NLRLSESRVLACSAYLQTK-GISAANIRTQGFGESKPLADNKTAAGRRQNRRVEFRVEPK 550
>gi|326319300|ref|YP_004236972.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323376136|gb|ADX48405.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 296
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ + E + + I + + + + ++ L + P L +
Sbjct: 151 AADNAARVRALEAQLRD------IEAQQTERGLLVTLGDVLFAFNKAELSAQAGPRLDKL 204
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A L +FP + I+ HTDS+G N +S+ RA + + + + I+ RG+
Sbjct: 205 ANFLRQFPDRKLIIEGHTDSVGGDAYNQSLSERRAQAV-QSALVQRGVAPDRITARGYGK 263
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF-PRGNIK 189
YP+ N + GR N+R+EI I +GN++
Sbjct: 264 TYPVADNSSPEGRAMNRRVEIVIADDKGNLR 294
>gi|89889933|ref|ZP_01201444.1| putative outer membrane protein, ompA family [Flavobacteria
bacterium BBFL7]
gi|89518206|gb|EAS20862.1| putative outer membrane protein, ompA family [Flavobacteria
bacterium BBFL7]
Length = 457
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 65/167 (38%), Gaps = 1/167 (0%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C D D V D + + Y
Sbjct: 292 CKTVKGPASNNGCPADRDNDGVIDADDKCPDTPGIASLAGCPKPAAPTVEEQEQLNQYAK 351
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + ++ + +L I IL K+P+ +I HTDS+G+ K N +S RA+ +
Sbjct: 352 TILFDTGKATIKAESAKVLSDITAILKKYPTAKFSIDGHTDSVGSAKLNQRLSDSRANEV 411
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
K+YL+ G+ R SV G+ P+ N TK GR N+R+EI +
Sbjct: 412 KNYLVANGIDEFRLSSV-GYGEARPVADNKTKTGRAQNRRVEINLVN 457
>gi|51244080|ref|YP_063964.1| outer membrane protein F [Desulfotalea psychrophila LSv54]
gi|50875117|emb|CAG34957.1| probable outer membrane protein F [Desulfotalea psychrophila LSv54]
Length = 216
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 8/160 (5%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV-SRIGDMITCYIPVHVSFVSEV 86
+ I + G +D+ E + + + + R D++T F +
Sbjct: 61 GAGIGATVGGIAGNQIGRYMDQQEQDLRNAVAASNAASVRRDQDVLTATFKGETFFDTNS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
++ + +AT+LNK+P+T I + HTDS+G N +S+ RA +K+ LI +
Sbjct: 121 FTIKPGGWAEVNRVATVLNKYPNTNIKVAGHTDSLGNEAYNQQLSERRARAVKNALI-QY 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ I G+ PI +++ N+R+EI I P
Sbjct: 180 GVNGNRIRAIGYGESLPISSSN-----AQNRRVEIVITPN 214
>gi|289548706|ref|YP_003473694.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484]
gi|289182323|gb|ADC89567.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484]
Length = 243
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQL 98
++ + + E + + + V+ I + + F ++ +F P+L
Sbjct: 85 GQKILKQIMELEKTLKTIGLEGKLKVAYEAIGIRLILQERLLFDSGSADIKPQFYPILDK 144
Query: 99 IATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
IA +LN P+ + ++ HTD S G +N +S RA + Y I +GVS +R +
Sbjct: 145 IAELLNSIPN-PVEVEGHTDNIPISTGRFPSNWELSTARASSVVRYFIAKGVSPDR-LKA 202
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
G+A PI +N T GR+ N+R+EI I NIK
Sbjct: 203 SGYADTRPIASNATPEGREQNRRVEIVII---NIK 234
>gi|225375333|ref|ZP_03752554.1| hypothetical protein ROSEINA2194_00958 [Roseburia inulinivorans DSM
16841]
gi|225212822|gb|EEG95176.1| hypothetical protein ROSEINA2194_00958 [Roseburia inulinivorans DSM
16841]
Length = 270
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 6/168 (3%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ + + + ++ +D + + + + + V
Sbjct: 94 TTDDTSESSDVAEEYKEEALAESEQMAEQVQDLVAQYGIQDQVEIDFNAEYVLLNLNGAV 153
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQERA 134
F + ++ + P++ I IL + +I I+ HTD+I +NN ++S RA
Sbjct: 154 LFDSGKSEIKSEAYPLMDKIGKILQSYQQNMIEIEGHTDNIPFTHSSKYENNDVLSMYRA 213
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ Y+ I G PI N T GR N+R+EI+I
Sbjct: 214 LYVADYMRNITTIDPSHIKSSGRGEYVPIADNSTPEGRARNRRVEIKI 261
>gi|298207224|ref|YP_003715403.1| Thrombospondin type 3 repeat:OmpA/MotB [Croceibacter atlanticus
HTCC2559]
gi|83849860|gb|EAP87728.1| Thrombospondin type 3 repeat:OmpA/MotB [Croceibacter atlanticus
HTCC2559]
Length = 478
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 76/188 (40%), Gaps = 14/188 (7%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL-----------DKAEDEFQM 56
++ + ++GC A + K + G D +
Sbjct: 287 TVAGIQALNGCPDADGDGIKDSEDNCPNEAGPASNNGCPFEDKDGDGVLDKDDQCPDVAG 346
Query: 57 QLQDTGIVVSRIG--DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + G + + + Y + +++ + + LQ IA I++++P+ I+
Sbjct: 347 TVANNGCPEVTVEVMNELNEYSRTILFDLNKSTIRSESFETLQNIADIMSEYPTAKFHIE 406
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTDS G+ N +S+ERA + + + ++ G+ PI TN T GRQ
Sbjct: 407 GHTDSQGSEAYNEKLSRERAASV-RTYLTTKGVAANKLTSEGYGELRPIATNKTAAGRQQ 465
Query: 175 NQRIEIQI 182
N+R+EI++
Sbjct: 466 NRRVEIKL 473
>gi|172061391|ref|YP_001809043.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171993908|gb|ACB64827.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 215
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 74/207 (35%), Gaps = 27/207 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL----------- 47
+K L + ++GC V
Sbjct: 3 MKIATRLSVFALAGALLAGCATQQGNNAAVGTGTGAALGAGIGALAGGGKGAAIGAGVGA 62
Query: 48 ----------DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKFLPM 95
+++ TG V+ D + +P V+F + + F P+
Sbjct: 63 LVGGVTGYNWQAIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPL 122
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +AT LN+ P ++ +TDS G+ + N +SQ RA + + + + + +S +
Sbjct: 123 LNDLATTLNQNPQLTGSVIGYTDSTGSAQLNQTLSQNRAQSVVN-ALAQRGVAGGRLSAQ 181
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI N T+ GR N+R+EI +
Sbjct: 182 GMGPSNPIADNATEAGRAQNRRVEIYL 208
>gi|315498712|ref|YP_004087516.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48]
gi|315416724|gb|ADU13365.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48]
Length = 187
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 64/181 (35%), Gaps = 3/181 (1%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L +++ +M +++ C K+ + E +
Sbjct: 9 LLVAIPLMLSMTACASHKYVDDKITATNGRIDQQETRLTQLDQTTQEALTRATAAGKLAE 68
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTL 123
+ + L + +L +A L + + IQ TDS GT
Sbjct: 69 GKFNY-SVVLSDDSIKFDTDKAVLSEAGKQVLADLAERLKRDNKNVYLEIQGFTDSTGTD 127
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N + RAD +K +L +GV+ NR S+ + + PI N T GR N+R+ I +
Sbjct: 128 DINYRLGNARADSVKRFLNSQGVALNRMASIS-YGAEQPIAPNSTAQGRAANRRVVIVVL 186
Query: 184 P 184
Sbjct: 187 S 187
>gi|327480142|gb|AEA83452.1| putative outer membrane protein [Pseudomonas stutzeri DSM 4166]
Length = 209
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 8/187 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + M I+GC +K + K + LD+ E + + L D+
Sbjct: 5 KSASLILCMIVIAGCSSKGEKK-----PSEAAAPVAPKVDYAWLDEYEPKLRDALVDSRF 59
Query: 64 VVSRIGDMITCYIPVHVSFVSEV--FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
V R +++ PV SF + L L + +A ++ K T + I H DS G
Sbjct: 60 EVERRDNVLVVTAPVDSSFNPDRPGMLLPVTLGPITRVAKLVEKDEKTAVVILGHADSTG 119
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N IS+ERA + + G +R + +RG P ND+K GR N+R+E+
Sbjct: 120 ADDVNRTISRERASAVAAIFRLSGFKHDR-LRIRGLGSDMPRAANDSKEGRAMNRRVEMV 178
Query: 182 IFPRGNI 188
+ P+ +
Sbjct: 179 LAPQTTM 185
>gi|296137072|ref|YP_003644314.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
gi|294341249|emb|CAZ89650.1| putative OmpA family protein [Thiomonas sp. 3As]
gi|295797194|gb|ADG31984.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
Length = 226
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 5/172 (2%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ--DTGIVVSR-IGDM 71
++ G + + + + + L+K + + Q Q Q TG+ V++ +
Sbjct: 50 LTAGGNTGKSAATGAVAGAAVGALGGYLWNQHLEKQKQDLQAQAQASGTGVQVTQTQDNR 109
Query: 72 ITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ +P L + P+L+ +AT LN+ PS + + TD+ GT N +S
Sbjct: 110 LKMNVPADAGFATGSAQLNPRMYPILESLATGLNQNPSETVQVFGFTDNTGTDAINYPLS 169
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ RA +K++L+ R + + ++ +G + P+ +N T GR N+R+EI +
Sbjct: 170 ENRALTVKNFLVSR-GVAPQRVTTQGLGPQNPVASNATAQGRAANRRVEIYV 220
>gi|110638407|ref|YP_678616.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281088|gb|ABG59274.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 509
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
S + E + +V+ + + + L K+ L + ++
Sbjct: 369 QSEVYDLEKAVAYETIKKDMVLEPLKLNASFRLNNLFFDFDSASLTKESELELDRVIEMM 428
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + I +HTD +G+ N +SQ RA+ + YL G+ + R + +G+ P
Sbjct: 429 KTNATMQVEISAHTDDMGSDAYNQKLSQLRAESVVKYLTLHGIITTRLV-AKGYGESVPS 487
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
NDT+ R N+R+E +I
Sbjct: 488 VPNDTEENRAKNRRVEFKII 507
>gi|170703075|ref|ZP_02893898.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170132016|gb|EDT00521.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 215
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 79/207 (38%), Gaps = 27/207 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL----------- 47
+K L + ++GC V
Sbjct: 3 MKIATRLSVFALAGALLAGCATQQGNNAAVGTGTGAALGAGIGALAGGGKGAAIGAGVGA 62
Query: 48 ----------DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKFLPM 95
+++ TG V+ D + +P V+F + + F P+
Sbjct: 63 LVGGVTGYNWQAIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPL 122
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +AT LN+ P ++ +TDS G+ + N +SQ RA + + L+QRGV+ R +S +
Sbjct: 123 LNDLATTLNQNPQLTASVVGYTDSTGSAQLNQTLSQNRAQSVVNALVQRGVAGGR-LSAQ 181
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI N T+ GR N+R+EI +
Sbjct: 182 GMGASNPIADNATEAGRAQNRRVEIYL 208
>gi|124009612|ref|ZP_01694285.1| thrombospondin type 3 repeat:OmpA/MotB [Microscilla marina ATCC
23134]
gi|123984753|gb|EAY24733.1| thrombospondin type 3 repeat:OmpA/MotB [Microscilla marina ATCC
23134]
Length = 493
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 4/172 (2%)
Query: 17 GCGLASRE---KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
GC + KK K N D D+ G+ +R +
Sbjct: 323 GCPDTDGDGIIDKKDDCPKKAGLAEFNGCPDRDKDGVPDKVDNCPDVPGVKDNRGCPEVL 382
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + P+L ++ +L K+ ST I ++ HTD+ G NL +S++R
Sbjct: 383 ERASKVLFAPGKAIINPVSFPVLNELSELLKKYASTKIYLEGHTDNQGDDDANLKLSKDR 442
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
A + YLI++G++ +R S GF PI N T GR+ N+R+++++ +
Sbjct: 443 AQAVADYLIKKGIAKSRIEST-GFGETKPIADNKTAAGRKKNRRVDMKLTNQ 493
>gi|298372337|ref|ZP_06982327.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298275241|gb|EFI16792.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 700
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 61/167 (36%), Gaps = 2/167 (1%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY-I 76
C +E + + D D+ ++ + + + +
Sbjct: 527 CPNTPKEVRGLVDENGCPKDTDGDGILDYKDECPTIKGVKENQGCPPIKKEVLKVFKQAL 586
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ +L+LI I+ P + I HTDS G N+ +S++RA
Sbjct: 587 HGIQFDTGKATIKPVSRGVLKLIVDIMRNNPDYNLIIAGHTDSQGNDALNMTLSEKRAAA 646
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ ++ R + +G+ P+ TN T GR N+R+E +
Sbjct: 647 V-RKYLEDRGIDKRRLQSKGYGETLPVATNKTAKGRAQNRRVEFTVV 692
>gi|269103244|ref|ZP_06155941.1| Flagellar motor rotation protein MotB [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268163142|gb|EEZ41638.1| Flagellar motor rotation protein MotB [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 314
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 6/173 (3%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+G + KK + + + + ++++ + + G +
Sbjct: 119 AGTLTGGQADKKNKTQQQDQDQNASDSLKQLEKVLNKAIEREIEEGNVEIENFGQQLVIR 178
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLIS 130
I +F FL+ KF P+++ +A+++ P T + I HTD ++N IS
Sbjct: 179 IKEQGAFPEGSAFLQPKFRPLVRQVASLVKDVPGT-VRISGHTDDRPVESELYRSNWDIS 237
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA + + + + V G A PI +NDT GR+ N+R+EI I
Sbjct: 238 AQRAVSVAQEMAKVTGFDQHRMQVVGLADTAPIASNDTAEGRKRNRRVEISIM 290
>gi|86141593|ref|ZP_01060139.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Leeuwenhoekiella blandensis MED217]
gi|85832152|gb|EAQ50607.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Leeuwenhoekiella blandensis MED217]
Length = 224
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 68/151 (45%), Gaps = 6/151 (3%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH---VSFVSEVFLEKKFLPMLQ 97
G +DK + ++ G V R+ D I + ++ + L
Sbjct: 66 NVIGKKMDKQAQRIEEEIP--GAEVERVDDGIVVNFDENSGVYFATNKYNINSASQETLN 123
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
++ ++ ++P T + + HTDS G+ N+ +S+ RA + +YL+ + ++ + + +
Sbjct: 124 GLSRVMQEYPQTNVLVVGHTDSTGSADYNMTLSKNRAQAVTNYLVSQ-GIASGRFTTQWY 182
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ P TN+T GR N+R+ + I P +
Sbjct: 183 GEEQPKYTNETAEGRSKNRRVTLAIVPNQEM 213
>gi|24375803|ref|NP_719846.1| OmpA family protein [Shewanella oneidensis MR-1]
gi|24350753|gb|AAN57290.1|AE015865_4 OmpA family protein [Shewanella oneidensis MR-1]
Length = 201
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 78/183 (42%), Gaps = 5/183 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + +T ++GC + R+ + + ++ + G + +A + + G
Sbjct: 2 KTSILLLSVTLLAGCSI--RDTVNIDEMTTTQASDLSDKDGDGVIEARERCNETAKGAGT 59
Query: 64 VVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G + + + + ++ ++ P ++ +A L ++P+T + I+ HT
Sbjct: 60 DNYGCGQIKSINERKEINVLFPNNSAYIAPEYYPQIEEVAIFLRQYPTTKVTIEGHTSRT 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N +SQERA+ + + L +R ++ G+ PI T N+R+
Sbjct: 120 GTDETNKELSQERANAVTAVLAERFGIDRSRLTAIGYGSSRPIVLEQTPEAEIRNRRVVA 179
Query: 181 QIF 183
++
Sbjct: 180 EVT 182
>gi|149195189|ref|ZP_01872279.1| OmpA domain protein [Caminibacter mediatlanticus TB-2]
gi|149134622|gb|EDM23108.1| OmpA domain protein [Caminibacter mediatlanticus TB-2]
Length = 383
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D LDK + + G V + G IT ++ + ++ +++P +
Sbjct: 244 DSDGDGVADYLDKCPNTPK------GFKVDQNGCAITYNFEIN-FDTNSAKIKPEYMPKI 296
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ A L P IQ +TD+ G+ N+++S++RA + + + + I+ G
Sbjct: 297 EKFAEFLKNHPDVKAEIQGYTDNRGSATYNMILSEKRAKAVYE-ALLKLGVNKDQITFVG 355
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ PI +NDT GR N+R+ +I
Sbjct: 356 YGEANPIASNDTPEGRAKNRRVVAKI 381
>gi|326389648|ref|ZP_08211214.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|325994363|gb|EGD52789.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200]
Length = 237
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 72/206 (34%), Gaps = 23/206 (11%)
Query: 1 MIKELGLSMFIMTTIS----------GCGLASREKKKVFLHKSNDTD---IVNKRFGSSL 47
MI L + +M TIS L+ ++ N +SL
Sbjct: 22 MITLLLIFFIVMYTISTINATKFAQIASSLSKTFTGTDYVIGQYSGSSFVQGNSGDKNSL 81
Query: 48 DKAEDEFQMQLQDTG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
+ E + +++ + + + + F + + +L I +
Sbjct: 82 GEIEKQLNGFIKENNLQGMVTSYIDERGLVISMQDSLLFDLGSADVHPEEKDVLIKIGNM 141
Query: 103 LNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
L P+ I ++ TD + +N +S RA + L+ + IS G+
Sbjct: 142 LKTLPN-HIRVEGFTDDLPIHNSKFDSNWELSVIRATNVVKILVNEVGIEPQRISAVGYG 200
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ ND++ R+ N+R++I I
Sbjct: 201 EYRPVVPNDSEEHRRLNRRVDIVIMN 226
>gi|254428955|ref|ZP_05042662.1| Thrombospondin type 3 repeat family [Alcanivorax sp. DG881]
gi|196195124|gb|EDX90083.1| Thrombospondin type 3 repeat family [Alcanivorax sp. DG881]
Length = 384
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 76/198 (38%), Gaps = 31/198 (15%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDK-AEDEFQMQLQDTGIVVSRIGDMITCYIPV-- 78
S EK++ ++ +D D+ A Q+ TG + D I +
Sbjct: 185 SSEKEEPAPVENVVSDSDGDGVPDERDQCANTPAGAQVDATGCELDDDNDSIVNSMDECP 244
Query: 79 --------------------------HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ + + P L+ +A + ++PS +
Sbjct: 245 NTPAGALVDDKGCQKYLDKDVKETLYVEFGHDKAEVRQTSYPSLENLAEGMRQYPSANLV 304
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
++ HTDS G+ N +SQ+RAD +K+ L+ S I+ G+ + PI N T GR
Sbjct: 305 LEGHTDSTGSAAYNKKLSQQRADAVKTVLVDHYNVSADRITTVGYGEEKPIADNKTSEGR 364
Query: 173 QNNQRIEIQIFPRGNIKK 190
N+R+E I + K+
Sbjct: 365 AENRRVE-TIM-KATTKE 380
>gi|124004460|ref|ZP_01689305.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123990032|gb|EAY29546.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 350
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 54/122 (44%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + + ++ L + +L ++P+ VI I HTD+IGT
Sbjct: 229 SIISVETGEVYRLDNVSFDFNKATFRPFSKVELDKLVKLLKQYPAIVILITGHTDNIGTD 288
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +SQ RA + +YL+ +G I G P+ +N+T GR N+R+E ++
Sbjct: 289 TKNFDLSQRRAQTVANYLLTKGGVDPDRIRTEGMGETQPVMSNNTNTGRALNRRVEFRVL 348
Query: 184 PR 185
+
Sbjct: 349 KK 350
>gi|95929277|ref|ZP_01312021.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
gi|95134775|gb|EAT16430.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
Length = 217
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 83/212 (39%), Gaps = 32/212 (15%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSND--------TDIVNKRFGS---------- 45
+ + + +M ++GC +K + S
Sbjct: 6 RMCVVVAVMVYLAGCSQPMNRTQKGAGIGAATGALAGALIGQAAGGDTESTLIGAGVGAA 65
Query: 46 -----------SLDKAEDEFQMQLQD-TGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKF 92
+D+ E + L G+ + R G+++ + V L
Sbjct: 66 VGAGTGAGIGYYMDQQEQAMRNALASVEGVKIDRDGNILYVTFRSDNQFDVGSFTLRAGA 125
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+ +A IL ++ T I + HTDS G+ + NL +S+ RA +++ L+ GV S R I
Sbjct: 126 QQDVARLAAILTEYHKTTILVAGHTDSTGSEEYNLGLSERRAMAVRNILVASGVISTR-I 184
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ GF PI N T+ GRQ N+R+ ++I P
Sbjct: 185 TTVGFGESAPIADNSTEYGRQLNRRVALKITP 216
>gi|110833683|ref|YP_692542.1| outer membrane protein OprF [Alcanivorax borkumensis SK2]
gi|110646794|emb|CAL16270.1| outer membrane protein OprF [Alcanivorax borkumensis SK2]
Length = 384
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 77/206 (37%), Gaps = 34/206 (16%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK-AEDEFQMQLQDTGIVVSRIGDMI 72
+ G +++ ++ TD D+ A Q+ TG + D I
Sbjct: 180 FLIGGSS---NEQEPAPIENVVTDSDGDGVPDDRDQCANTPAGAQVDATGCELDDDNDSI 236
Query: 73 TCYIPV----------------------------HVSFVSEVFLEKKFLPMLQLIATILN 104
+ + + + P L+ +A +
Sbjct: 237 VNSMDDCPNTPAGALVDDKGCQKYLEKDVKETLYVEFGHDKTEVRQTSYPSLENLAEDMR 296
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
++PS + ++ HTDS G+ N +SQ+RAD +K+ L+ + S I+ G+ + PI
Sbjct: 297 QYPSANLVLEGHTDSTGSAAYNKKLSQQRADAVKAVLVDKFGVSADRITTVGYGEEKPIS 356
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNIKK 190
N T GR N+R+E + + K+
Sbjct: 357 DNKTSEGRAENRRVETIL--KATTKE 380
>gi|296134255|ref|YP_003641502.1| OmpA/MotB domain protein [Thermincola sp. JR]
gi|296032833|gb|ADG83601.1| OmpA/MotB domain protein [Thermincola potens JR]
Length = 296
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 64/158 (40%), Gaps = 10/158 (6%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQD----TGIVVSRIGDMITCYIPVHVSF-VSEVFLE 89
+ K+ + KA+++ ++ +VV+ + + + F + +
Sbjct: 78 QSAGAQKKEMEEMKKAKEQLDAYIKGQNLGGKVVVAYEERGLVISLKETMFFAIGSAAIN 137
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRG 145
+ L I +L P+ + I+ HT ++ +N +S RA + +LI R
Sbjct: 138 PQAQETLIKIGQVLKNMPN-NLRIEGHTCNLPIRTANFPSNWELSTARATNVVKFLIDRV 196
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +S G+ P+ N ++ R N+R++I +
Sbjct: 197 GFDPKRLSATGYGEYRPLVPNTSEANRAMNRRVDIVVL 234
>gi|212638649|ref|YP_002315169.1| flagellar motor protein MotB [Anoxybacillus flavithermus WK1]
gi|212560129|gb|ACJ33184.1| Flagellar motor protein B [Anoxybacillus flavithermus WK1]
Length = 251
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 9/160 (5%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
++K L K + +F ++ + V+ + + I V F ++ ++
Sbjct: 92 ISKEEYEELKKIQSKFNEYVKTNQLSGELSVAMTEEGLLVTIANDVLFDSGSADIKPQYR 151
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSN 149
+ + I+ +L P I I HTD++ +N +S RA L++
Sbjct: 152 NVAKKISNLLVMNPPRNIVISGHTDNVPINNAKFASNWELSVMRAVNFMKLLLENTKLDP 211
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ S +G+ PI +N T GR N+R+EI I P+ +
Sbjct: 212 QLFSAKGYGEFKPIASNATPEGRAKNRRVEILIMPQEPTQ 251
>gi|115352534|ref|YP_774373.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115282522|gb|ABI88039.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 232
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 74/207 (35%), Gaps = 27/207 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL----------- 47
+K L + ++GC V
Sbjct: 20 MKIATRLSVFALAGALLAGCATQQGNNAAVGTGTGAALGAGIGALAGGGKGAAIGAGVGA 79
Query: 48 ----------DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKFLPM 95
+++ TG V+ D + +P V+F + + F P+
Sbjct: 80 LVGGVTGYNWQAIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPL 139
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +AT LN+ P ++ +TDS G+ + N +SQ RA + + + + + +S +
Sbjct: 140 LNDLATTLNQNPQLTGSVIGYTDSTGSAQLNQTLSQNRAQSVVN-ALAQRGVAGGRLSAQ 198
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI N T+ GR N+R+EI +
Sbjct: 199 GMGPSNPIADNATEAGRAQNRRVEIYL 225
>gi|167835831|ref|ZP_02462714.1| ompA family protein [Burkholderia thailandensis MSMB43]
Length = 215
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 24/202 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL---------------- 47
L + ++GC V
Sbjct: 8 RLSVFALAGALLAGCATQQGTNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGALVGGV 67
Query: 48 -----DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKFLPMLQLIA 100
+++ Q TG V+ D + +P V+F + + F P+L +A
Sbjct: 68 TGYNWQAIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATNQYAVTPAFTPLLNDLA 127
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
T LN+ P ++ +TDS G+ N +SQ RA + + L QR V+++R +S +G
Sbjct: 128 TTLNQNPQITASVVGYTDSTGSAAYNQTLSQNRAQSVVNALSQRSVAASR-LSAQGMGAS 186
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
PI N T+ GR N+R+EI +
Sbjct: 187 NPIADNATEAGRAQNRRVEIYL 208
>gi|239815674|ref|YP_002944584.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110]
gi|239802251|gb|ACS19318.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110]
Length = 172
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 67/181 (37%), Gaps = 12/181 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K S+ I+ I+GC ++ +S T + S++ +
Sbjct: 1 MLKRTIYSLAIVALIAGCSSGTKLNDTPVTDRSG-TAGGQQGSASAVAPVTIDPNAGTAQ 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + RI ++ +F ++ A L P ++I+ HTD
Sbjct: 60 GPVGIERI----------VYFDYDSYTVKPEFQSLIDGHARFLKANPQRRVSIEGHTDDR 109
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + NL + Q+R++ ++ + S+ I F + P + N+R EI
Sbjct: 110 GGREYNLALGQKRSEAVRR-ALTLLGVSDAQIEAVSFGKEKPAVQGSGEEAWAQNRRAEI 168
Query: 181 Q 181
+
Sbjct: 169 R 169
>gi|313902670|ref|ZP_07836069.1| OmpA/MotB domain protein [Thermaerobacter subterraneus DSM 13965]
gi|313467108|gb|EFR62623.1| OmpA/MotB domain protein [Thermaerobacter subterraneus DSM 13965]
Length = 364
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 58/153 (37%), Gaps = 6/153 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLP 94
+ +R +++ + + + V F L +
Sbjct: 193 SAEERERMEGLVERVNEALREAGLGGRASARLTERGVAIIFDDQVFFDLGRAELRPEGRD 252
Query: 95 MLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+L+ +A IL + P T I ++ HTD+ G +N +S RA + YL ++ R
Sbjct: 253 LLRRLAPILAQVPGT-ILVEGHTDNLPIRSGRYPSNWELSTARATTVVRYLAEQAGLDPR 311
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++ G+ P N + R N+R+EI +
Sbjct: 312 RLAAAGYGEWRPRYPNTSAANRARNRRVEIVLL 344
>gi|254181403|ref|ZP_04888000.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|184211941|gb|EDU08984.1| ompA family protein [Burkholderia pseudomallei 1655]
Length = 215
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 72/202 (35%), Gaps = 24/202 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL---------------- 47
L + ++GC V
Sbjct: 8 RLSVFALAGALLAGCATQQGTNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGALVGGV 67
Query: 48 -----DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFLEKKFLPMLQLIA 100
+++ Q TG V+ D + +P V+F + + F +L +A
Sbjct: 68 TGYNWQAIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFTLLLNDLA 127
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
T LN+ P ++ +TDS G+ +N +SQ RA + + + + + +S +G
Sbjct: 128 TTLNQNPQITASVVGYTDSTGSAAHNQTLSQNRAQSVVN-ALAQRGVAANRLSAQGMGAS 186
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
PI N T+ GR N+R+EI +
Sbjct: 187 NPIADNATEAGRAQNRRVEIYL 208
>gi|197117764|ref|YP_002138191.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
gi|197087124|gb|ACH38395.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
Length = 468
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 62/150 (41%), Gaps = 1/150 (0%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ + L+ + + + + + ++
Sbjct: 190 AAAPAETVATPVEQPAAVTPAPEPPLEVPAAEPTPDHYKYCITLHGE-FDIDKAIIRPEY 248
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+ + + K+P+T I+ HTD++G+ +N +SQ RA+ + +YL+++ +
Sbjct: 249 KEEIAQVGNFMKKYPTTTAVIEGHTDNVGSYNHNQDLSQRRAEAVVNYLVEQYGIERSRL 308
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S +G+ + PI N T G+Q N+RIE I
Sbjct: 309 SAKGYGFTRPIADNATDEGKQKNRRIEAII 338
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
+ K ++ + D V ++ + + + + ++ ++ + +
Sbjct: 320 ADNATDEGKQKNRRIEAIIDCAFDVQQVTPPDRLCMALVLDFDAGKADVKSQYRNEIAKV 379
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A + ++ +T I+ HTD+ G+ + N+ +SQ+RA + +YL+ +S +G+
Sbjct: 380 ADYMKRYNTTTAVIEGHTDNTGSPEKNMKLSQQRAQNVVNYLVDNFGIERSRLSAKGYGA 439
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
I N+T GRQ N+RI I
Sbjct: 440 TRRISYNNTPEGRQKNRRINAVI 462
>gi|52079917|ref|YP_078708.1| flagellar motor protein MotB [Bacillus licheniformis ATCC 14580]
gi|52785288|ref|YP_091117.1| flagellar motor protein MotB [Bacillus licheniformis ATCC 14580]
gi|52003128|gb|AAU23070.1| motility protein B [Bacillus licheniformis ATCC 14580]
gi|52347790|gb|AAU40424.1| MotB [Bacillus licheniformis ATCC 14580]
Length = 259
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 78/177 (44%), Gaps = 9/177 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
++ E K + ++ ++ SL K +++ ++ + + +
Sbjct: 76 TSTTEDGKSPDQAKDLSEAQKEKDKQSLKKIQEQVNRFIKEKNLQKQVNTKLTDEGLLLS 135
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLIS 130
I ++ F + + ++ +P+ + ++ +L P I I HTD++ K+N +S
Sbjct: 136 IEDNIFFDSGKAEIRQQDIPLAKEVSDLLVLNPPRNIVISGHTDNVPIRNSQFKSNWHLS 195
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
RA LI+ + S +G+ PI +NDT+ GR+ N+R+EI I P G
Sbjct: 196 VMRAVNFMGLLIENPKLDAKIFSAKGYGEFKPIASNDTEEGRRKNRRVEILILPIGQ 252
>gi|39995916|ref|NP_951867.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
gi|39982680|gb|AAR34140.1| OmpA domain protein [Geobacter sulfurreducens PCA]
gi|298504930|gb|ADI83653.1| OmpA domain porin [Geobacter sulfurreducens KN400]
Length = 466
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 55/102 (53%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + + ++ ++ +A L ++PST I+ HTD++G N+ +SQ RA+ + +Y
Sbjct: 233 FDIDKADVRPQYHDEVKRVADFLKEYPSTTAVIEGHTDNVGDDAYNMRLSQRRAESVVNY 292
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ +S RGF PI N T+ G+Q N+RIE I
Sbjct: 293 LVDNFGIDRTRLSARGFGKTRPIADNSTEAGKQRNRRIEAII 334
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ G ++ + + V++ + D + + V + ++ ++ +
Sbjct: 316 ADNSTEAGKQRNRRIEAIIDCALEDPKVIAALPDRLCIALKVQ-FDTDKWDIKPQYRGEI 374
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ + + P+T I+ HTD +GT +N+ +S RA+ + +YL++ +S +G
Sbjct: 375 AKVGDFMTRNPTTTAIIEGHTDRVGTADHNMKLSLRRAEAVVNYLVEHFGIERSRLSAKG 434
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + PI N T GR N+RI I
Sbjct: 435 YGFSRPIAYNSTAEGRALNRRINAII 460
>gi|237740698|ref|ZP_04571179.1| outer membrane porin F [Fusobacterium sp. 2_1_31]
gi|229422715|gb|EEO37762.1| outer membrane porin F [Fusobacterium sp. 2_1_31]
Length = 340
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 80/169 (47%), Gaps = 5/169 (2%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV--SRIGDMITC 74
G G + + K + + G + + + + + S + +
Sbjct: 171 GSGTYTDKSKNLVIENDGKGKAKITFNGQTTEVDAKPLEKPGKLEMVPPVPSIEANSLLI 230
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ F + + + +L+ +AT+L + I +TDS G+ ++N ++S++R
Sbjct: 231 TSDSGILFDVDKYDVRPEDKEVLKNLATVLKEMNVKNFEIDGYTDSDGSDEHNQVLSEKR 290
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A+ +K++L+ +GV++ I+ +G+ P+ +NDT GRQ N+R+EI I
Sbjct: 291 ANSVKNFLVSQGVTAE--ITTKGYGESKPVASNDTAEGRQKNRRVEIII 337
>gi|329902399|ref|ZP_08273103.1| Outer membrane lipoprotein omp16 precursor [Oxalobacteraceae
bacterium IMCC9480]
gi|327548814|gb|EGF33448.1| Outer membrane lipoprotein omp16 precursor [Oxalobacteraceae
bacterium IMCC9480]
Length = 224
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSFVSE-VFLEKKFLPMLQL 98
+ + ++ + + + TG+ V++ + + IP +SF + ++ F P+L
Sbjct: 77 NVWSTRMENQKQAMEQATRGTGVQVTQTADNRLKLAIPSDISFDTNRSDIKPDFRPVLDR 136
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
LN STV+ I HTD+ G+ N +S +RA + YLI R + ++ G
Sbjct: 137 FGNSLNDNASTVVTIIGHTDNTGSAAINDPLSVDRAGRTRDYLISR-GVAPYRFTIEGRG 195
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
PI +N+ GR N+R+EI + R
Sbjct: 196 ENDPIASNNDSTGRARNRRVEIFVAERQQ 224
>gi|326403344|ref|YP_004283425.1| hypothetical protein ACMV_11960 [Acidiphilium multivorum AIU301]
gi|325050205|dbj|BAJ80543.1| hypothetical protein ACMV_11960 [Acidiphilium multivorum AIU301]
Length = 215
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIA 100
+ L+ + Q Q TG+ VS+ + + +P L + P+L +
Sbjct: 67 WNQHLEAQKQALQRTAQGTGVQVSQTADNRLKLNVPADAGFATGSATLNPRLYPILDQLG 126
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L + P+ + I +TDS G+ N +S RA +K+YL+ R S + I+ RG +
Sbjct: 127 QGLQQNPTETVQIIGYTDSTGSNAINYPLSDNRAASVKTYLVSR-GISGQRIATRGMGPQ 185
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
P+ +N T GR N+R++I +
Sbjct: 186 DPVASNATAAGRAANRRVDIYV 207
>gi|162448339|ref|YP_001610706.1| outer membrane porin precursor [Sorangium cellulosum 'So ce 56']
gi|161158921|emb|CAN90226.1| outer membrane porin precursor [Sorangium cellulosum 'So ce 56']
Length = 608
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 71/178 (39%), Gaps = 6/178 (3%)
Query: 17 GC----GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
C GL + + D D + + ++ + Q+ V R+ +
Sbjct: 431 ACPDLPGLVTTDPATNGCPGDTDGDGIRDDKDACPNEKGKPNEDPTQNGCPVAVRVTETE 490
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQ 131
+ + + +L +A +L P I +Q HTD GT + N +SQ
Sbjct: 491 IVILQQVQFDTGKATIRPVSNELLDEVAGVLKDHPEILKIEVQGHTDDRGTRQFNTKLSQ 550
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA+ + L++R + + + +G+ PI N T+ GRQ N+R++ I + +
Sbjct: 551 ARAESVLKALVER-GIAAQRLQAKGYGPDVPIAENKTEAGRQKNRRVQFNIIEKEKKQ 607
>gi|307265590|ref|ZP_07547144.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919388|gb|EFN49608.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 237
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 72/206 (34%), Gaps = 23/206 (11%)
Query: 1 MIKELGLSMFIMTTIS----------GCGLASREKKKVFLHKSNDTD---IVNKRFGSSL 47
MI L + +M TIS L+ ++ N +SL
Sbjct: 22 MITLLLIFFIVMYTISTINATKFAQIASSLSKTFTGTDYVIGQYSGSSFVQGNSGDKNSL 81
Query: 48 DKAEDEFQMQLQDTG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
+ E + +++ + + + + F + + +L I +
Sbjct: 82 GEIEKQLNGFIKENNLQGMVTSYIDERGLVISMQDSLLFDLGSADVHPEEKDVLIKIGNM 141
Query: 103 LNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
L P+ I ++ TD + +N +S RA + L+ + IS G+
Sbjct: 142 LKTLPN-HIRVEGFTDDLPIHNSKFDSNWELSVIRATNVVKILVNEVGIEPQRISAVGYG 200
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ ND++ R+ N+R++I I
Sbjct: 201 EYRPVVPNDSEEHRRLNRRVDIVIMN 226
>gi|310778794|ref|YP_003967127.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
gi|309748117|gb|ADO82779.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
Length = 208
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 27/207 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV--NKRFGSSLDKAEDEFQMQ-- 57
+K++ + + + +SGC A E + + N I N GS +D+ +
Sbjct: 1 MKKIVVMLAALAALSGCSSADEETAMLNKMEKNLNKIEENNATTGSMIDQYKTRILDAKT 60
Query: 58 ---------------------LQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPM 95
+ G++V R D +T +P V ++ +++ F P+
Sbjct: 61 NVANLEKDINAIDSFINPETVFEKNGVIVKRERDQLTLIMPTDVVFDFNKSEIKEDFKPL 120
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + L + + I HTD+IG+ NL +SQ+RA+ K YL+ +G+++ R I+
Sbjct: 121 LDSLYEALTIYKGLSVKIDGHTDNIGSYDYNLKLSQKRAESAKEYLVSKGLNAGRIIT-E 179
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G ++ P +N T+ GR N+RIE+ I
Sbjct: 180 GHSFSTPAASNATQAGRDKNRRIEVVI 206
>gi|209694505|ref|YP_002262433.1| flagellar motor protein MotB [Aliivibrio salmonicida LFI1238]
gi|208008456|emb|CAQ78622.1| sodium-driven polar flagellar protein MotB [Aliivibrio salmonicida
LFI1238]
Length = 309
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 74/174 (42%), Gaps = 7/174 (4%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
++G +S + ++ N+ + + + ++ + + V +G +
Sbjct: 123 LTGGESSSTSTQTNA-QSDAESQSQNQSQQELEETIKKALEREIAEGAVEVENLGQQLVI 181
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLI 129
I +F FL+ KF P+++ I ++ P I + HTD+ ++N +
Sbjct: 182 RIREKGAFPAGSAFLQPKFRPLIRQIGELVKDVPGI-IRVSGHTDNQPLESELYRSNWDL 240
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S +RA + +++ ++ + VRG A P+ N T R N+R+EI I
Sbjct: 241 SAQRAVSVGHEMLRVKGFNSDRLRVRGMASTEPLGPNKTAAQRARNRRVEISIM 294
>gi|83643650|ref|YP_432085.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83631693|gb|ABC27660.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 464
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 68/178 (38%), Gaps = 15/178 (8%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRF-----GSSLDKAEDEFQMQLQDT-----GIVV 65
+GC + + ++ + G LD D L G V
Sbjct: 275 TGCPVVGDDDADGVPNEKDQCPNSPAAAKVDSRGCPLDTDRDGITDGLDACPDTPYGAKV 334
Query: 66 SRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G I V + + + +F+ ++ +A + ++P T ++ HTD
Sbjct: 335 DNRGCRIQLSETVTITLNVTFPTNSAAITDEFVSEVEKLAEFMRQYPDTKAVVEGHTDDR 394
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G N +S++RA ++ +++R + IS G+ PI N+T GR N+R+
Sbjct: 395 GQDAYNQKLSEKRASAVRQMVVERFGIAGERISSVGYGETRPIGDNNTADGRSANRRV 452
>gi|148652191|ref|YP_001279284.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148571275|gb|ABQ93334.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1]
Length = 403
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 69/179 (38%), Gaps = 1/179 (0%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
+ + A+ E V + +++ + + + + G V D
Sbjct: 214 LAPAVVAPPQATVEPTPVIVVEADQDSDNDGVIDRLDQCPDTPVNTVVDENGCPVQVQID 273
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-LKNNLLI 129
+ +++++ P + +A + ++P++ +I+ H G + N +
Sbjct: 274 DELKMELRVFFDNDKSVIKEQYKPEIAKVAEKMREYPNSSASIEGHASKTGPSARYNQRL 333
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
S+ RA +K+ L + +S G+ Y PI NDT+ GR N+R+ I +
Sbjct: 334 SEARAIAVKTMLTNEFGVAPNRLSTVGYGYDRPIAPNDTEEGRAMNRRVYAVITGNKTM 392
>gi|226952116|ref|ZP_03822580.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp.
ATCC 27244]
gi|294648350|ref|ZP_06725858.1| peptidoglycan-associated lipoprotein [Acinetobacter haemolyticus
ATCC 19194]
gi|226837144|gb|EEH69527.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp.
ATCC 27244]
gi|292825762|gb|EFF84457.1| peptidoglycan-associated lipoprotein [Acinetobacter haemolyticus
ATCC 19194]
Length = 187
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 65/180 (36%), Gaps = 6/180 (3%)
Query: 2 IKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K L L + T + +GC +K + +T L + L
Sbjct: 3 MKYLSLPLIAATLVFTGCAS----RKPATDITAGNTPTGTTVSTEGLSEDAALNAQNLAG 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V L + LQ A L ++ +A+ HTD
Sbjct: 59 ASAKGVTAANKAFLAKRVVHFDYDSSELSNEDYQTLQAHAQFLVANANSRVALTGHTDER 118
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA ++S+L+ + + + + + P++ + + N+R+EI
Sbjct: 119 GTREYNMALGERRAKAVESFLVTN-GVNPQQLEAVSYGKEAPVNPGHNEAAWKENRRVEI 177
>gi|124267239|ref|YP_001021243.1| outer membrane protein [Methylibium petroleiphilum PM1]
gi|124260014|gb|ABM95008.1| outer membrane protein [Methylibium petroleiphilum PM1]
Length = 235
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIP 77
G + + + + + +++ + Q TG+ V+R D + +P
Sbjct: 57 GDSKKGAATGAAIGALGGAVAGNVWSKKMEEKRRAMEQSTQGTGVDVTRTADNQLKLNVP 116
Query: 78 VHV-SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + ++ + +L A L P+ + + HTDS G+ N +S +RA
Sbjct: 117 SDISFDTGKSAIKPELRTVLDSFANGLANDPALQVRVIGHTDSTGSDAINNPLSVDRAQS 176
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ YL RG+ R I G PI N ++ GR N+R+EI +
Sbjct: 177 VRDYLAGRGILPTR-IETSGRGSHEPIADNTSEAGRAKNRRVEILL 221
>gi|254292855|ref|YP_003058878.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
gi|254041386|gb|ACT58181.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
Length = 222
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 37/220 (16%)
Query: 1 MIKELGLSMFIM-TTISGCGLASREKKK--------------------VFLHKSNDTDIV 39
M + L+ ++GC ++ L ++ +
Sbjct: 1 MKNIIALAALSTTILVAGCQTTDPYSRETKTSNTAKGAAIGALGGAVLGALTNTSSGEQA 60
Query: 40 NKR--------------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K G +D+ E + + +L +TG+ V+R+GD I +P ++F
Sbjct: 61 AKNAMIGAGIGAIAGGASGRYMDQQEKKLRERLDETGVGVTRVGDTIQLVMPGDITFATG 120
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ +F +LQ + +L +F TV+ I HTD++G+ + N +SQ RA+ + + L+Q
Sbjct: 121 RAEINNQFDYVLQDVGLVLQEFDKTVVFIDGHTDTVGSYQKNDELSQARANNVAARLMQE 180
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G+ R + V G+ V N+R+EI++ P
Sbjct: 181 GILGGRLV-VTGYGESRLKVPTGDGVNEPLNRRVEIRLEP 219
>gi|171320878|ref|ZP_02909877.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171093863|gb|EDT38995.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 214
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 73/207 (35%), Gaps = 27/207 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL----------- 47
+K L + ++GC V
Sbjct: 3 MKIATRLSVFALAGALLAGCATQQGNNAAVGTGTGAALGAGIGALAGGGKGAAIGAGVGA 62
Query: 48 ----------DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKFLPM 95
+++ TG V+ D + +P V+F + + F P+
Sbjct: 63 LVGGVTGYNWQAIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPL 122
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +AT LN+ P ++ +TDS G+ + N +SQ RA + + + + + +S +
Sbjct: 123 LNDLATTLNQNPQLTGSVVGYTDSTGSAQLNQTLSQNRAQSVVN-ALGQRGVAGGRLSAQ 181
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI N T GR N+R+EI +
Sbjct: 182 GMGASNPIADNATDAGRAQNRRVEIYL 208
>gi|332664040|ref|YP_004446828.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332332854|gb|AEE49955.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 651
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ D + + L ++ P L +A +LN+ P+ I I HTD++GT
Sbjct: 533 DLVANKDQAPVVLRNVFFETASAALRQESGPELDHLADLLNQNPNLRIQINGHTDNVGTD 592
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+NL +S++RA + +YL+ + + ++ +GF PI N+T+ GR+ N+R E +
Sbjct: 593 ADNLRLSEQRAKAVYTYLVGK-GIAAERLAYKGFGETQPIADNNTEEGRKVNRRTEFVVL 651
>gi|77361278|ref|YP_340853.1| flagellar motor protein MotB [Pseudoalteromonas haloplanktis
TAC125]
gi|76876189|emb|CAI87411.1| sodium-driven polar flagellar protein [Pseudoalteromonas
haloplanktis TAC125]
Length = 306
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 7/174 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
SR K + + ++ + K + + Q+ D I + +G I I + S
Sbjct: 128 SRSTSKEQASEQAISAADQQQTNDLVKKIAQQLEKQIIDGAIELESLGQQIIIRIRENGS 187
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADV 136
F FL+ KF P++Q I +L P I + HTD S NN +S +RA
Sbjct: 188 FPSGSAFLQPKFKPIIQEIGVLLKDVPG-EITVSGHTDDFQVSNELYINNWDLSSKRAVA 246
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ S L + + V G A P+ ND+ R+ N+R+EI I +G K+
Sbjct: 247 VASELQKVVGFDKNRMMVVGRAETRPLVPNDSNEDRRRNRRVEISIL-QGKAKE 299
>gi|332977451|gb|EGK14226.1| outer membrane protein [Psychrobacter sp. 1501(2011)]
Length = 383
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 73/191 (38%), Gaps = 9/191 (4%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-DTGIVV 65
+ + + + G LA + + +V S D D +VV
Sbjct: 182 MGLAGLEVVLGGHLAPAVVAPATMVEPTPVFVVEADQDSDGDGVIDRLDQCPNTPANVVV 241
Query: 66 SRIGDMITCYIPV-------HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G + I + +++++ P + +A + ++P++ +I+ H
Sbjct: 242 DETGCPVQVQIDDELKMELRVFFDNDKSVIKEQYKPEIAKVAEKMREYPNSSASIEGHAS 301
Query: 119 SIGT-LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G + N +S+ RA +K+ L + +S G+ Y PI NDT+ GR N+R
Sbjct: 302 KTGPSARYNQRLSEARAIAVKTMLTNEFGVAPNRLSTVGYGYDRPIAPNDTEEGRAMNRR 361
Query: 178 IEIQIFPRGNI 188
+ I ++
Sbjct: 362 VYAVITGNKSM 372
>gi|329895993|ref|ZP_08271251.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC3088]
gi|328922074|gb|EGG29437.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC3088]
Length = 354
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 8/174 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFG-SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + + ++N G S L++ ++ + + V D I +
Sbjct: 182 SSPSDSAESAQSQANAPAPPEDDIGDSDLEQIRQNLAPEISRSLVNVEMDQDQIKITLAD 241
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD-- 135
+F L +FL +L + ++ V+ + HTDSI + S
Sbjct: 242 QGAFVSGSADLRPEFLQLLNRVGDSISDT-DGVVTVSGHTDSIPMAFSMRFKSNWDLSAA 300
Query: 136 ---VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ YLI +G + +SV+G+A PI TNDT GR N+RIEI I +G
Sbjct: 301 RSASVADYLITQGYLGDIEVSVQGYADTVPIATNDTAEGRAKNRRIEIMIDKKG 354
>gi|197124706|ref|YP_002136657.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|196174555|gb|ACG75528.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
Length = 206
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 76/206 (36%), Gaps = 30/206 (14%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREK--------------------KKVFLHKSNDTD 37
M K L ++ + +GC A + KK L +
Sbjct: 1 MNKTSLRLTAAVTAVLLFAGCQTAGKRTAIGAGAGGLAGAGVGALIGGKKGALIGAGVGA 60
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
+ G LDK E + R + + + + F L+ + + L
Sbjct: 61 LAGGSVGLYLDKQHKELEKI-----AETKRTENGLLVEMKGDILFDSGSSALKPEAISKL 115
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ + +L K+ I I+ +TD+ G+ N +S RAD +K L+ R + I+ G
Sbjct: 116 EQMGDVLAKYGDDRIRIEGYTDATGSKSMNEELSLRRADAVKRVLVGR-GVQEKQITALG 174
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
P+ N T GR N+R+E+ I
Sbjct: 175 MGPVRPVADNGTASGRAQNRRVELHI 200
>gi|148259686|ref|YP_001233813.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|146401367|gb|ABQ29894.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
Length = 227
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIA 100
+ L+ + Q Q TG+ VS+ + + +P L + P+L +
Sbjct: 79 WNQHLEAQKQALQRTAQGTGVQVSQTADNRLKLNVPADAGFATGSATLNPRLYPILDQLG 138
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L + P+ + I +TDS G+ N +S RA +K+YL+ R S + I+ RG +
Sbjct: 139 QGLQQNPTETVQIIGYTDSTGSNAINYPLSDNRAASVKTYLVSR-GISGQRIATRGMGPQ 197
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
P+ +N T GR N+R++I +
Sbjct: 198 DPVASNATAAGRAANRRVDIYV 219
>gi|325272915|ref|ZP_08139241.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51]
gi|324101950|gb|EGB99470.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51]
Length = 145
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
Q+ +TG+ V R GD I +P +++F + F L +A+ +F I +
Sbjct: 1 QMANTGVEVQRQGDQIKLIMPGNITFATDSANIAPSFYQPLNNLASSFKQFNQNTIEVVG 60
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
TDS G+ ++N+ +SQ RA + +YL +GV S+R +SVRG PI +N GR N
Sbjct: 61 FTDSTGSRQHNMDLSQRRAQAVSTYLTSQGVDSSR-LSVRGMGPDQPIASNADANGRAQN 119
Query: 176 QRIEIQIFP 184
+R+E+ + P
Sbjct: 120 RRVEVNLKP 128
>gi|226940371|ref|YP_002795445.1| Outer membrane protein A [Laribacter hongkongensis HLHK9]
gi|226715298|gb|ACO74436.1| Outer membrane protein A [Laribacter hongkongensis HLHK9]
Length = 226
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 7/185 (3%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-----D 60
L I + +++ K L + + G +D+ +FQ QL
Sbjct: 39 ILGTLGGAAIGAAVSSKKDRSKGALIGAIGGGLAGAGIGQYMDRQARDFQRQLATQIRDG 98
Query: 61 TGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
VV R + I + + L+ F+P + I+ I+N++ T + I HTDS
Sbjct: 99 QIFVVKRADNSILVTMTSQTAFDTNSASLKPGFMPTINTISRIVNQYGKTTLDITGHTDS 158
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G + N+ +SQ RA +++ L+ R + +S G P +N ++ GRQ N+R+E
Sbjct: 159 TGNDRINVPLSQNRAAAVQNALLSR-NVHPQRLSAYGMGASQPRASNASEAGRQLNRRVE 217
Query: 180 IQIFP 184
I I P
Sbjct: 218 ILIEP 222
>gi|89100891|ref|ZP_01173740.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
gi|89084378|gb|EAR63530.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
Length = 269
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 69/176 (39%), Gaps = 9/176 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI----VVSRIGDMITC 74
A+ ++ + I L + E++ + +Q+ G+ S + +
Sbjct: 93 ASAAGTLEEGQNDMEAEGKIQKLTDKQELKEVEEKVKTYIQNNGLTDKLETSLTDEGLLV 152
Query: 75 YIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLI 129
I +V F + L + I +L P I I HTD++ ++N +
Sbjct: 153 TIRDNVFFASGSAEVRSGELTIADEIGELLVMDPPRNIIISGHTDNMPIKNSEFESNWEL 212
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
S RA L+ R S +GF P +NDTK GR N+R+EI I PR
Sbjct: 213 SVMRAVNFMKILLHNKDLDARAFSAKGFGEFQPAASNDTKEGRDKNRRVEILILPR 268
>gi|119897129|ref|YP_932342.1| outer membrane protein [Azoarcus sp. BH72]
gi|119669542|emb|CAL93455.1| conserved hypothetical outer membrane protein [Azoarcus sp. BH72]
Length = 224
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 38/218 (17%)
Query: 2 IKELGLSMFIMTTIS----GCGLASREKK----------------------KVFLHKSND 35
+K + +S+ ++ ++ GC S ++ K ++
Sbjct: 1 MKRIVISLSCLSLVAAGLGGCAGMSDTQRHTGTGAAIGAAAGAVLGAATSGKGNRGEATA 60
Query: 36 TDIVNKR---------FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVS 84
+ + + E + TG+ VS+ + + IP V
Sbjct: 61 IGAAAGAAIGAGGGYLWSQRMQAQKAEMERATAGTGVSVSQTADNRLKLDIPSDVSFDTG 120
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
++ + P+L A LN+ T ++I HTDS G+ N +S RA + YL+ R
Sbjct: 121 RYDIKPEMRPVLDRFANTLNQHTVTTVSIIGHTDSTGSDAVNNPLSVNRAAATRDYLVAR 180
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
GV+ +R I++ G + PI N T GR N+R+EI +
Sbjct: 181 GVAGSR-IAIDGRGAREPIADNGTVAGRAQNRRVEIFV 217
>gi|149194324|ref|ZP_01871421.1| Thrombospondin type 3 repeat:OmpA/MotB [Caminibacter mediatlanticus
TB-2]
gi|149135499|gb|EDM23978.1| Thrombospondin type 3 repeat:OmpA/MotB [Caminibacter mediatlanticus
TB-2]
Length = 209
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 27/204 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ------ 55
+K+ + I GC V L + ++ ++ K + +
Sbjct: 1 MKKYLFFIGISLFFIGCADKPLATNVVDLAGNK--KVIGWDDKNNTQKCKPKVVVKEIVK 58
Query: 56 ----MQLQDTGI--------------VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
G+ V G I + ++ F ++ ++K + P ++
Sbjct: 59 YKELKDSDGDGVPDIKDKCPNTPKNLTVDHNGCPIITTLRINFDF-NKWNVKKIYYPQIK 117
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A IL P+ I + HTD+IG+ K NL +SQ+RA+ +K L+ + I RG+
Sbjct: 118 KVAEILKANPNLKIEVAGHTDNIGSAKYNLKLSQKRAEAVKKILVNVYHINPNRIVARGY 177
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQ 181
KYP+ N T R N+R+EI
Sbjct: 178 GEKYPLVPNTTSTNRALNRRVEII 201
>gi|153002898|ref|YP_001377223.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152026471|gb|ABS24239.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 510
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 3/163 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV- 80
E+ L D DK E + V + + V
Sbjct: 345 PSEQGLAELKGCAAKDGDGDGVPDHQDKCPAEAGSADNEGCPRVVVEKEAKKVELREKVQ 404
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ ++ + +L IA +L + T + I+ H+DS G N +SQ RAD +
Sbjct: 405 FDTGKATIKPESAGLLDEIAKVLAEHAEITRVVIEGHSDSSGGAALNKRLSQARADAVLK 464
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L++R + +S +GF PI +NDT GR+ N+R+EI I
Sbjct: 465 ALVER-GIAKERLSAKGFGPSRPIASNDTPEGREANRRVEISI 506
>gi|332799185|ref|YP_004460684.1| OmpA/MotB domain-containing protein [Tepidanaerobacter sp. Re1]
gi|332696920|gb|AEE91377.1| OmpA/MotB domain protein [Tepidanaerobacter sp. Re1]
Length = 226
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT---GIVVSRIGDMITCYIPVHVSFV-SE 85
+ +++ + E++ Q + + G+ V+ + V F +
Sbjct: 56 EAGDAGSFLISAEEQREFELLEEKIQKIIDEDNIGGVQVNLDERGLVVRFVEGVLFDSGK 115
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYL 141
+ +L +A +L + I I+ HTD++ + N +S RA + Y+
Sbjct: 116 ADIRNDAKEILDKLAPLLIE-SHRQIRIEGHTDNLPIHTSEFPSNWELSTARAVNVVKYM 174
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
I+R S IS G++ PI ND++ R N+R++I I +
Sbjct: 175 IERHNLSPYIISAAGYSEYRPIAPNDSEKNRALNRRVDIIILKSAS 220
>gi|330817987|ref|YP_004361692.1| OmpA family protein [Burkholderia gladioli BSR3]
gi|327370380|gb|AEA61736.1| OmpA family protein [Burkholderia gladioli BSR3]
Length = 216
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 70/202 (34%), Gaps = 24/202 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL---------------- 47
L + ++GC V
Sbjct: 8 RLSVFALAGALLAGCASPQGNNTAVGTGAGAALGAGIGALAGGGKGAAIGAGVGALVGGV 67
Query: 48 -----DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFLEKKFLPMLQLIA 100
++ Q TG V+ D + +P V+F + + F P+L +A
Sbjct: 68 TGYNWQAIKNRLAPSAQKTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFAPLLNDLA 127
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ LN+ P ++ +TDS G+ +N +SQ RA + + + + + +G
Sbjct: 128 STLNQNPQITASVVGYTDSTGSAAHNQTLSQNRAQSVV-TALVQRGVAGGRLGAQGMGAS 186
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
P+ N T+ GR N+R+EI +
Sbjct: 187 NPVADNATEAGRAQNRRVEIYL 208
>gi|313675126|ref|YP_004053122.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312941824|gb|ADR21014.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 699
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
+ + S + I N+ ++++ E + + + + + + +
Sbjct: 534 SDRGYAFNSTEIGISNEGKLQTINEETGEIEEDSKGVELKLQPLAKDANLTLKDIYFESN 593
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L + L + ++ +PS I I +HTD +G+ N +SQERA+ + SY+
Sbjct: 594 SSALFESSFEELDRVIKLMKSYPSMKIEIAAHTDDVGSAAYNTRLSQERANSVISYITGN 653
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++ R IS +G+ P+ ND++ R N+R+E++I
Sbjct: 654 SIAEGRLIS-KGYGESKPVVANDSEENRAKNRRVELKIL 691
>gi|238028341|ref|YP_002912572.1| OmpA family protein [Burkholderia glumae BGR1]
gi|237877535|gb|ACR29868.1| OmpA family protein [Burkholderia glumae BGR1]
Length = 219
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 47/202 (23%), Positives = 78/202 (38%), Gaps = 24/202 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL---------------- 47
L + ++GC V
Sbjct: 8 RLSVFAIAGALLAGCATPQGNNTAVGTGAGAALGAGIGALAGGGKGAAIGAGIGALAGGV 67
Query: 48 -----DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFLEKKFLPMLQLIA 100
++ Q TG V+ D + +P V+F + + F P+L +A
Sbjct: 68 AGYNWQAIKNRLAPSAQSTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFAPLLNELA 127
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
T LN+ P ++ +TDS G+ +NL +SQ RA + + L+QRGV+ +R +S +G
Sbjct: 128 TSLNQNPQITASVVGYTDSTGSAAHNLTLSQNRAQSVVTALVQRGVAGSR-LSAQGMGAS 186
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
P+ N T GR N+R+EI +
Sbjct: 187 NPVADNATDAGRAQNRRVEIYL 208
>gi|297538999|ref|YP_003674768.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301]
gi|297258346|gb|ADI30191.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301]
Length = 180
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 66/181 (36%), Gaps = 6/181 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ + + + IS C + ++ + K V + + +
Sbjct: 1 MKKILVPLLLAGMISACAGSHVKEAPSNVAK----MPVASPKQAEPESPPPAVTSSAPEN 56
Query: 62 GIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I V+ + D + ++ ++ +L+ A L P I I+ + D
Sbjct: 57 KIEVNPLTDPNNILSKRSVYFDFDKYVVKPEYRTLLEAHAKYLLSHPEKSIRIEGNADDR 116
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ + NL + Q+RA + L ++ I + + P T + + N+R +I
Sbjct: 117 GSREYNLALGQKRAVAV-KSLANLLGVPDKQIETISYGEEKPKATGEDETSWAENRRADI 175
Query: 181 Q 181
Sbjct: 176 V 176
>gi|239827803|ref|YP_002950427.1| flagellar motor protein MotB [Geobacillus sp. WCH70]
gi|239808096|gb|ACS25161.1| OmpA/MotB domain protein [Geobacillus sp. WCH70]
Length = 251
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 68/174 (39%), Gaps = 5/174 (2%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S K++ + N + + +K + + + + S + + I +
Sbjct: 77 SPSKQEHKQQQKNSNKEDKEELHAVQEKIDTYIAEKHLNGKLQTSLTDEGLAITILNDIL 136
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADV 136
F + K + + I+ +L P I I HTD++ +N +S RA
Sbjct: 137 FDSGSAEVRPKDRKLAKEISQLLVMNPPRNIIISGHTDNVPIHNAQFASNWELSVMRAIN 196
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L++ R+ S +G+ P+ N+T GR N+R+EI I P+ +
Sbjct: 197 FMKILLENPELDPRWFSAKGYGEFKPVAPNNTPEGRMKNRRVEILILPKTEASR 250
>gi|104780902|ref|YP_607400.1| outer membrane protein OprF [Pseudomonas entomophila L48]
gi|95109889|emb|CAK14594.1| outer membrane protein OprF [Pseudomonas entomophila L48]
Length = 346
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 65/175 (37%), Gaps = 10/175 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G + +D N ++DK D + V G +
Sbjct: 178 GGSGGQKAAPAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEV 231
Query: 77 P----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ ++ +A + ++P T ++ HTDS+G N +S+
Sbjct: 232 VRVELDVKFDFDKSVVKPNSYADIKNLADFMKQYPQTTTTVEGHTDSVGPDAYNQKLSER 291
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
RA +K L Q+ + +S G+ P+ N T+ GR N+R+E Q+ +
Sbjct: 292 RAKAVKDVLTQQYGVESGRVSSVGYGETRPVADNATEAGRAVNRRVEAQVEAQAK 346
>gi|20807043|ref|NP_622214.1| flagellar motor protein [Thermoanaerobacter tengcongensis MB4]
gi|254479612|ref|ZP_05092920.1| OmpA family protein [Carboxydibrachium pacificum DSM 12653]
gi|20515530|gb|AAM23818.1| Flagellar motor protein [Thermoanaerobacter tengcongensis MB4]
gi|214034455|gb|EEB75221.1| OmpA family protein [Carboxydibrachium pacificum DSM 12653]
Length = 237
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 6/155 (3%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
G + + + + R + + + F + +
Sbjct: 73 GNAENKDNLGEVQAQLQAFIKESNLQGMVSTYRDERGLVVSLQDTLLFDLGSADVHPEEK 132
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSN 149
+L I +L P+ I ++ TD + N +S RA + L+
Sbjct: 133 EVLIKIGKMLKNLPNY-IRVEGFTDDLPIHNQKFDSNWELSVIRATTVVKILVNEVGIEP 191
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ IS G+ PI ND++ R+ N+R++I I
Sbjct: 192 QRISAVGYGEYRPIVPNDSEEHRRLNRRVDIVIMN 226
>gi|119472095|ref|ZP_01614326.1| flagellar motor protein MotB [Alteromonadales bacterium TW-7]
gi|119445115|gb|EAW26408.1| flagellar motor protein MotB [Alteromonadales bacterium TW-7]
Length = 306
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 7/174 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
SR + + + ++ + K + + Q+ D I + +G I I + S
Sbjct: 128 SRSTSQEQSSEQAISAADQEQTNELVKKIAQQLERQIIDGAIELESLGQQIIIRIRENGS 187
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADV 136
F FL+ KF P++Q I +L P I + HTD S NN +S +RA
Sbjct: 188 FPSGSAFLQPKFKPIIQDIGELLKDVPG-EITVSGHTDDFQVSNELYVNNWDLSSKRAVA 246
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ S L + V G A P+ N+T R+ N+R+EI I +G K+
Sbjct: 247 VASELQTVQGFDKTRMMVVGRAETRPLVPNETNEDRRRNRRVEISIL-QGKAKE 299
>gi|332519230|ref|ZP_08395697.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045078|gb|EGI81271.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 235
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 83/216 (38%), Gaps = 36/216 (16%)
Query: 6 GLSMFIMTTISGCGLA--SREKKKVFLHKSNDTDIVNKRFG------------------- 44
L++ ++ ++S C + K+K + + I+ G
Sbjct: 12 ILTVMVVLSMSSCSSVKNANNKQKGGVIGATGGAILGAIIGNNVGKGGNGELGAVIGGVV 71
Query: 45 ---------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH---VSFVSEVFLEKKF 92
S +DK + + ++ G V R+ D I + ++ +
Sbjct: 72 GGGAGVLIGSKMDKQAQKIEEEIP--GAEVERVDDGIVVTFDENSGVYFDTAKYNINAAS 129
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L + + ++P T I + HTDS+G+ +N+ +S+ RA + + + SN +
Sbjct: 130 QATLSKLIGVFREYPDTNILVVGHTDSVGSEDSNMTLSKNRAYAVTN-YLTNQGISNARV 188
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ F P + N TK GR N+R+ I I P +
Sbjct: 189 TTNWFGEGQPTNDNSTKEGRAKNRRVNIAIVPNQKM 224
>gi|153002489|ref|YP_001368170.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
gi|217975056|ref|YP_002359807.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
gi|151367107|gb|ABS10107.1| OmpA/MotB domain protein [Shewanella baltica OS185]
gi|217500191|gb|ACK48384.1| OmpA/MotB domain protein [Shewanella baltica OS223]
Length = 202
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 78/183 (42%), Gaps = 5/183 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + +T ++GC + R+ + + ++ + G + +A + Q G
Sbjct: 2 KTIIFFLSVTILAGCSM--RDTVNIDEMTTTQAYDLSDKDGDGVIEARERCNDTAQGAGT 59
Query: 64 VVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G + + ++ ++ P ++ +A L ++P+T + I+ HT
Sbjct: 60 DNYGCGKIKAINERKELSILFPNDSAYIAPEYYPQIEEVAVFLQQYPTTKVTIEGHTSRT 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + NL++SQERAD + + L +R ++ +G+ P+ T N+R+
Sbjct: 120 GTDERNLVLSQERADAVTAVLAERFGIDRNRLTAKGYGSSNPVVLERTPEAEIRNRRVVA 179
Query: 181 QIF 183
++
Sbjct: 180 EVT 182
>gi|256419485|ref|YP_003120138.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256034393|gb|ACU57937.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 225
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 45/219 (20%), Positives = 90/219 (41%), Gaps = 34/219 (15%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKV----------------FLHKSNDTDIVNKR 42
+K + + T+ C + + +T +
Sbjct: 1 MKRINPIVAILLSAITLFACNTVKQMDNTQKGAAIGVAGGAATGAIIGKAAGNTALGAII 60
Query: 43 -----------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEK 90
G +DK E + ++ + V R+G+ I V F + L
Sbjct: 61 GAAVGGGAGVLIGKKMDKQAQEIKTEVPN--ATVERVGEGINVTFASGVLFGFDKSDLTG 118
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+ ++ +ATILNK+P T + ++ HTD+ GT N+ +S+ RA+ + +YL +GV+++R
Sbjct: 119 QAQQNIKDLATILNKYPDTYVRVEGHTDTTGTDSYNMGLSERRANAVATYLKSQGVAASR 178
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + + P+ N++ + N+R+E IF +K
Sbjct: 179 -VQTFWYGARQPVVPNNSDANKAKNRRVEFSIFANEKMK 216
>gi|158320524|ref|YP_001513031.1| OmpA/MotB domain-containing protein [Alkaliphilus oremlandii
OhILAs]
gi|158140723|gb|ABW19035.1| OmpA/MotB domain protein [Alkaliphilus oremlandii OhILAs]
Length = 254
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 8/144 (5%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILN-- 104
+ E Q +T ++VS+ + +V F + L+ + +LQ IA L
Sbjct: 101 ETLESYLQEYDLETEVLVSQESRGLMLRFQDNVLFDPGKAELKPRSKEILQDIAEFLRSP 160
Query: 105 KFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ I ++ HTD+ N +S RA + Y I+ S+ G+
Sbjct: 161 ELKDKDIRVEGHTDTVKVNPTSIYPTNWELSTGRASNVVRYFIEEIDMDPERFSIAGYGE 220
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF 183
PI NDT + N+R++I I
Sbjct: 221 YQPIAPNDTVENKSKNRRVDIVIL 244
>gi|325473514|gb|EGC76707.1| OmpA family protein [Treponema denticola F0402]
Length = 422
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 62/145 (42%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
K+ ++ ++ + L + + + +T I + L + L+ I
Sbjct: 278 KKIDTAAEEEIKKSVEDLNLENTTIEKTDEGLTISIENIQFLPNSAILRESEKEKLKKIG 337
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
IL KFP I HT GT + +S+ERA + +YLI GV + RGF +
Sbjct: 338 EILLKFPDREFLISGHTALAGTEEERQKLSEERAAAVANYLIDLGVQKREHVYTRGFGAR 397
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPR 185
P+ N++ N+R+EI I +
Sbjct: 398 RPVAANNSPENMAKNRRVEITILDK 422
>gi|134296618|ref|YP_001120353.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
gi|134139775|gb|ABO55518.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
Length = 213
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 79/207 (38%), Gaps = 27/207 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL----------- 47
+K L + ++GC V
Sbjct: 3 MKIATRLSVFALAGALLAGCATQQGNNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGA 62
Query: 48 ----------DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKFLPM 95
+++ TG V+ D + +P V+F + + F P+
Sbjct: 63 LVGGVTGYNWQAIKNKLAPSAAKTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPL 122
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +AT LN+ P +I +TDS G+ + N +SQ RA + + L+QRGV+ R +S +
Sbjct: 123 LNDLATTLNQNPQVTASIVGYTDSTGSAQLNQTLSQNRAQSVVNALVQRGVAGGR-LSAQ 181
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI N T+ GR N+R+EI +
Sbjct: 182 GMGASNPIADNATEAGRAQNRRVEIYL 208
>gi|167038133|ref|YP_001665711.1| OmpA/MotB domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167039156|ref|YP_001662141.1| OmpA/MotB domain-containing protein [Thermoanaerobacter sp. X514]
gi|256750878|ref|ZP_05491762.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300913254|ref|ZP_07130571.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X561]
gi|307723732|ref|YP_003903483.1| OmpA/MotB domain-containing protein [Thermoanaerobacter sp. X513]
gi|320116543|ref|YP_004186702.1| OmpA/MotB domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166853396|gb|ABY91805.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X514]
gi|166856967|gb|ABY95375.1| OmpA/MotB domain protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256750213|gb|EEU63233.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300889939|gb|EFK85084.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X561]
gi|307580793|gb|ADN54192.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X513]
gi|319929634|gb|ADV80319.1| OmpA/MotB domain protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 238
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 64/206 (31%), Gaps = 28/206 (13%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSN----------------------DTDIVNKRF 43
+S+ ++ I +++ K S+
Sbjct: 23 MMSLLLVFFIVLYSISTVNATKFAQIASSLSKTFTGTDYVLFQYNGSSFMDGNSGDKSSL 82
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
G + + + + + + + F + + +L I +
Sbjct: 83 GEIEKQLKGFIKENNLQGAVTSYIDERGLVISLQDSLLFDLGSADVRPEEKEVLIKIGDM 142
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
L P+ I ++ TD + N N +S RA + L+ IS G+
Sbjct: 143 LKSLPN-HIRVEGFTDDLPIHNNKFDSNWELSVIRATNVVKILVNEVGIEPARISAVGYG 201
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ N+++ R+ N+R++I I
Sbjct: 202 EYRPVVPNNSEENRRLNRRVDIVIMN 227
>gi|260061425|ref|YP_003194505.1| Thrombospondin type 3 repeat:OmpA/MotB [Robiginitalea biformata
HTCC2501]
gi|88785557|gb|EAR16726.1| Thrombospondin type 3 repeat:OmpA/MotB [Robiginitalea biformata
HTCC2501]
Length = 446
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 14/185 (7%)
Query: 14 TISGCGLASRE---KKKVFLHKSNDTD---------IVNKRFGSSLDKAEDEFQMQLQDT 61
+SGC A + K D+ D +
Sbjct: 263 ALSGCPDADGDGVADKDDECPSEAGPAENNGCPWPDTDGDGVLDKDDECPDTAGTVANNG 322
Query: 62 GIVVSRI-GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
V+ + Y + + L+ + + I IL+++P++ ++ HTDS+
Sbjct: 323 CPEVTEEVQAQLNEYARTILFDTGKASLKPESTRVFVDIIRILDQYPNSRFTVEGHTDSV 382
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ N +S+ERA+ ++ +LI G+ ++R + G+ + PI TN+T+ GR N+R+EI
Sbjct: 383 GSNSLNQKLSEERANSVRDFLINEGIDASR-LEAVGYGEERPIATNNTRAGRTQNRRVEI 441
Query: 181 QIFPR 185
+
Sbjct: 442 NLIKE 446
>gi|319790576|ref|YP_004152209.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
gi|317115078|gb|ADU97568.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
Length = 251
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 54/245 (22%), Positives = 88/245 (35%), Gaps = 59/245 (24%)
Query: 1 MIKELGLSMFIMTTISGC-------------------------------------GLASR 23
M + L L+ + GC G +
Sbjct: 1 MKRILTLTTAGALLLGGCATTQQQQAQTAPKKEVNKVAAGAAIGAVVGGAIGALTGPSGS 60
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV------------------- 64
K + L + ++ G L + + L +
Sbjct: 61 NKGERALIGAAAGAVLGGAIGYILQQQAEALGRDLGVQPVDHTNPAVKPQAPVISDKRPK 120
Query: 65 -VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V + + + V F + L+ + + LQ IA L + P T + + +TD+ G+
Sbjct: 121 AVVKEPGRVKVVLKDSVLFGLNSAELKPEAVKELQRIAQTLKENPKTTVVVVGYTDNTGS 180
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
LK NL +S+ERA+ +K L++ GV R + V G K PI NDT R N+R+EI I
Sbjct: 181 LKYNLKLSKERAEAVKKVLVEAGVRPERIL-VFGCGPKNPIAPNDTPQHRALNRRVEILI 239
Query: 183 FPRGN 187
+P G
Sbjct: 240 YPEGE 244
>gi|253701505|ref|YP_003022694.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251776355|gb|ACT18936.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 466
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 56/102 (54%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + + ++ + + + K+P+T I+ HTD++G+ +N +SQ RA+ + ++
Sbjct: 235 FDIDKAIIRPEYKEEIAQVGNFMKKYPTTTAVIEGHTDNVGSYNHNQDLSQRRAEAVVNH 294
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+++ +S +G+ + PI N T G+Q N+RIE I
Sbjct: 295 LVEQYGIERSRLSAKGYGFTRPIADNATDEGKQKNRRIEAII 336
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
+ K ++ + D V ++ + + + + +++++ + +
Sbjct: 318 ADNATDEGKQKNRRIEAIIDCAFDVQQVTPPDRLCMSLVLDFDPGKAEVKQQYRNEIAKV 377
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A + ++ +T I+ HTD+ G+ + N+ +SQ+RA + ++L+ +S +G+
Sbjct: 378 ADYMKRYNTTTAVIEGHTDNTGSPEKNMKLSQQRAQNVVNHLVDNFGIERSRLSAKGYGA 437
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
I N+T GRQ N+RI I
Sbjct: 438 TRRISYNNTPEGRQKNRRINAVI 460
>gi|310817527|ref|YP_003949885.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309390599|gb|ADO68058.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 1779
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC ++ L S+ + D+ + V G I +
Sbjct: 1614 GCPDPDNDQD-GILDGSDKCPNEPEVINGREDE-----DGCPDQGEVNVRVEGKKILI-L 1666
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQERAD 135
++ + + +L+ +A +L P T I ++ HTDS G+ NL +S RA
Sbjct: 1667 QKVYFATNKDIILDRSFSLLKQVAAVLRANPQLTKIRVEGHTDSQGSDAFNLDLSDRRAK 1726
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+++YLI++ + + G+ P+DTNDT GR+NN+R+E I
Sbjct: 1727 SVRTYLIEKEGIAADRLEAVGYGETKPVDTNDTVAGRENNRRVEFIIV 1774
>gi|115379068|ref|ZP_01466194.1| hypothetical protein STIAU_2752 [Stigmatella aurantiaca DW4/3-1]
gi|115363928|gb|EAU63037.1| hypothetical protein STIAU_2752 [Stigmatella aurantiaca DW4/3-1]
Length = 831
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC ++ L S+ + D+ + V G I +
Sbjct: 666 GCPDPDNDQD-GILDGSDKCPNEPEVINGREDE-----DGCPDQGEVNVRVEGKKILI-L 718
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQERAD 135
++ + + +L+ +A +L P T I ++ HTDS G+ NL +S RA
Sbjct: 719 QKVYFATNKDIILDRSFSLLKQVAAVLRANPQLTKIRVEGHTDSQGSDAFNLDLSDRRAK 778
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+++YLI++ + + G+ P+DTNDT GR+NN+R+E I
Sbjct: 779 SVRTYLIEKEGIAADRLEAVGYGETKPVDTNDTVAGRENNRRVEFIIV 826
>gi|330830900|ref|YP_004393852.1| sodium-driven polar flagellar protein [Aeromonas veronii B565]
gi|328806036|gb|AEB51235.1| Sodium-driven polar flagellar protein [Aeromonas veronii B565]
Length = 283
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 6/172 (3%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G + K+ + D ++ + ++ + Q+QD I + +G I I
Sbjct: 97 AGGQDKSDGKQTGGDTAQDAKKAQEQSNTLAKALAEQMKDQIQDGAIEIEALGQQIIIRI 156
Query: 77 PVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQ 131
SF FL+ +F P+++ +AT+L P I I HTD++ T ++N +S
Sbjct: 157 REKASFPAGSAFLQPQFWPVIRKVATLLKDVPG-EITISGHTDNVATEDELFQSNWELSS 215
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA + +++ + V+G A P+ N T R+ N+R+EI I
Sbjct: 216 QRAVAVAHQMLKVPGFDQGRLVVQGMADSQPLVPNTTPENRRMNRRVEIAIM 267
>gi|110638537|ref|YP_678746.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281218|gb|ABG59404.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 510
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ S+ L + L + +L + P I I+ HTD+ G N+++SQ R
Sbjct: 400 IKLNHIYFETSKYDLLPESYYELDKVVKLLRENPKMKIEIEGHTDNQGNADKNMILSQNR 459
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
A + Y+I + + I+ +GF P+ NDT RQ N+R+E I +
Sbjct: 460 AKSVMDYIISK-GITADRITSKGFGITKPMVDNDTPENRQLNRRVEFTILQK 510
>gi|86160609|ref|YP_467394.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85777120|gb|ABC83957.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 248
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 76/206 (36%), Gaps = 30/206 (14%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREK--------------------KKVFLHKSNDTD 37
M K L ++ + +GC A + KK L +
Sbjct: 43 MNKTSLRLTAAVTAVLLFAGCQTAGKRTAIGAGAGGLAGAGVGALLGGKKGALIGAGVGA 102
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
+ G LDK E + R + + + + F L+ + + L
Sbjct: 103 LAGGSVGLYLDKQHKELEKI-----AETKRTENGLLVEMKGDILFDSGSSALKPEAIGKL 157
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ + IL K+ I I+ +TDS G+ N +S RAD +K L+ R + I+ G
Sbjct: 158 EQMGDILAKYGDDRIRIEGYTDSTGSKSMNEELSLRRADAVKRVLVGR-GVQEKQITALG 216
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
P+ N + GR N+R+E+ I
Sbjct: 217 MGPVRPVADNGSATGRAQNRRVELHI 242
>gi|295095728|emb|CBK84818.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 568
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 56/117 (47%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I + + + L+ +L + P +I + HTDS G ++N ++S
Sbjct: 429 KIVRLDSMSLFDTGKWALKPASTKLLVNSLVGIKAKPGWLIVVAGHTDSTGDDQSNQVLS 488
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+RA+ ++ ++ G +V+G+ P+ TNDT GR N+R+EI + P+ N
Sbjct: 489 LKRAESVRDWMRDTGDVPESCFAVQGYGESRPVATNDTAEGRALNRRVEISLVPQAN 545
>gi|120437695|ref|YP_863381.1| thrombospondin repeat-containing OmpA/MotB family outer membrane
protein [Gramella forsetii KT0803]
gi|117579845|emb|CAL68314.1| OmpA/MotB family outer membrane protein containing thrombospondin 3
repeats [Gramella forsetii KT0803]
Length = 472
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 75/173 (43%), Gaps = 15/173 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC A + V + + + + E +L + V
Sbjct: 308 GCPWADTDGDGVLDKDDDCPEEAGPAASNGCPEPTAEVISELNEYSKTV----------- 356
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ +++ + + LQ I I++++ +T+ I+ HTDS G+ N+ +S+ERA
Sbjct: 357 ---LFDLNKATIRPESEEALQSIHDIMHEYSTTIFHIEGHTDSSGSDSYNMKLSKERAAS 413
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + +++ + ++ G+ PI TN T GRQ+N+R+EI + +K
Sbjct: 414 V-ATWLEQNGIPAKRLTSEGYGETQPIATNSTAKGRQDNRRVEISLDKDKEMK 465
>gi|322436615|ref|YP_004218827.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
gi|321164342|gb|ADW70047.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
Length = 531
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 66/151 (43%), Gaps = 2/151 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
++N + S ++ + + QL + + + + + + + L+
Sbjct: 367 EANQRADAANKRAESAEQMRERLRAQLNE-VLQTTETSRGVIVNLSDALFDTGKYTLKTN 425
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L +A IL +P + ++ +TD +G+ N +S+ RA+ + +++++
Sbjct: 426 TQVSLARVAGILQSYPGLKVQVEGYTDIVGSDALNQRLSENRANTTRDFMVKQ-GVPTDS 484
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
IS G+ P+ N T GR N+R+E+ +
Sbjct: 485 ISAAGYGKADPVADNGTAAGRAQNRRVELVV 515
>gi|220932514|ref|YP_002509422.1| OmpA/MotB domain protein [Halothermothrix orenii H 168]
gi|219993824|gb|ACL70427.1| OmpA/MotB domain protein [Halothermothrix orenii H 168]
Length = 245
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 6/151 (3%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQ 97
N+ F + + + + + + + + V + + ++ +L
Sbjct: 86 SNQVFEKVMGQINRYVEKEKLSDRVKMELTKRGLVVRLTGQVLYDIGKAEIKPGGKRLLD 145
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNN----LLISQERADVIKSYLIQRGVSSNRFIS 153
IA I+ K P+ IA++ HTD+ +S RA + Y I+R +S
Sbjct: 146 EIAGIIEKIPN-EIAVEGHTDNWPIHNEQFPSNWELSTTRATNVIKYFIERHGIDPSRLS 204
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G++ P+ NDT R N+R+EI I
Sbjct: 205 AAGYSEYRPLYPNDTVEHRAKNRRVEIVILN 235
>gi|332534966|ref|ZP_08410784.1| flagellar motor rotation protein MotB [Pseudoalteromonas
haloplanktis ANT/505]
gi|332035584|gb|EGI72076.1| flagellar motor rotation protein MotB [Pseudoalteromonas
haloplanktis ANT/505]
Length = 306
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 7/174 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
SR + + + ++ + K + + Q+ D I + +G I I + S
Sbjct: 128 SRSTSQEQSSEQATSAADQEQTNELVKKIAQQLEKQIIDGAIELESLGQQIIIRIRENGS 187
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADV 136
F FL+ KF P++Q I +L P I + HTD S NN +S +RA
Sbjct: 188 FPSGSAFLQPKFKPIIQDIGVLLKDVPG-EITVSGHTDDFQVSNELYINNWDLSSKRAVA 246
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ S L + V G A P+ ND+ R+ N+R+EI I +G K+
Sbjct: 247 VASELQTVQGFDKNRMMVVGRADTRPLVPNDSNEDRRRNRRVEISIL-QGKAKE 299
>gi|332704881|ref|ZP_08424969.1| peptidoglycan-associated lipoprotein [Desulfovibrio africanus str.
Walvis Bay]
gi|332555030|gb|EGJ52074.1| peptidoglycan-associated lipoprotein [Desulfovibrio africanus str.
Walvis Bay]
Length = 198
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 64/195 (32%), Gaps = 14/195 (7%)
Query: 1 MIKELGLSMFIMTTISG--CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M ++ + +F++ ++G C + ++ + +
Sbjct: 4 MTRKTIVVLFVLALLAGFGCAKKQVSSTPDQTSAAAQGEMTDGTPTDDEAARRAAEEEAY 63
Query: 59 QDTGIVVSRIGDMITCYIPV-----------HVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + + + G + L+ K +LQ A L P
Sbjct: 64 RRSELQDDQTGQTEQERLQAEQQAKQNINELVFFAYDSYELDSKAREVLQRKAQALKLMP 123
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
T + I+ D GT + NL + + RA + + I++ + P+D +
Sbjct: 124 DTRVTIKGFCDERGTEEYNLALGERRARASFD-FLVLMGVNPNRINIVSYGEDNPLDPAN 182
Query: 168 TKVGRQNNQRIEIQI 182
++ N+R E +I
Sbjct: 183 SEAAYAKNRRCEFEI 197
>gi|325105621|ref|YP_004275275.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324974469|gb|ADY53453.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 230
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + G +DK E + + G V G+ I
Sbjct: 55 SKAGNTAVGAIIGGALGGTAGALIGKKMDKQAKEIEAAIP--GAEVIPAGEGIIVKFDSG 112
Query: 80 VSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ F ++ L + +A LNK+P T I + HTD+IGT N +S ERA+ +
Sbjct: 113 LLFDFNKATLSATAKQNIDNLAASLNKYPDTDILVVGHTDAIGTDAVNNKLSLERANSVV 172
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
SY I +GVSS R S G PI +NDT GR N+R+EI I
Sbjct: 173 SYAISKGVSSGRLKS-SGKGKTEPIASNDTDAGRAQNRRVEIVIV 216
>gi|88799579|ref|ZP_01115155.1| Flagellar motor protein [Reinekea sp. MED297]
gi|88777664|gb|EAR08863.1| Flagellar motor protein [Reinekea sp. MED297]
Length = 319
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 63/151 (41%), Gaps = 5/151 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+D + + ++ + + + + + I + ++ +FLP+
Sbjct: 133 SDEAMQELEDEAARIAQALSDEIAEGMLQIETVNETIIIRVKEQSFTGGSDYVADEFLPV 192
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L + +L P I ++ HTD++ +NN L+S RA + YL +
Sbjct: 193 LDKVRELLVTTPG-DIWVEGHTDNVPIATSQFRNNWLLSAARALSVAEYLFIAPEMAEER 251
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ G PI +N+T GR N+R+EI I
Sbjct: 252 FTIVGHGSTKPIASNETPEGRAQNRRVEIII 282
>gi|295399258|ref|ZP_06809240.1| OmpA/MotB domain protein [Geobacillus thermoglucosidasius C56-YS93]
gi|312110141|ref|YP_003988457.1| OmpA/MotB domain protein [Geobacillus sp. Y4.1MC1]
gi|294978724|gb|EFG54320.1| OmpA/MotB domain protein [Geobacillus thermoglucosidasius C56-YS93]
gi|311215242|gb|ADP73846.1| OmpA/MotB domain protein [Geobacillus sp. Y4.1MC1]
Length = 254
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 65/177 (36%), Gaps = 5/177 (2%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
++ + +K + +K + + + + S + + I
Sbjct: 77 SQPKQQNDQQNDNKKKIDKQEKEELHEVQEKIDTYIVNERLNGKLKTSLTEEGLAITILN 136
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQER 133
+ F + + + + I+ +L P I I HTD++ +N +S R
Sbjct: 137 DILFDSGSAEVRPQDRQLAKEISQMLVMNPPRNIIISGHTDNVPIHNAQFSSNWELSVMR 196
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A L++ R S +G+ P+ +NDT GR N+R+EI I P +
Sbjct: 197 AVNFMKLLLENPKLDPRLFSAKGYGEFKPVASNDTPEGRMKNRRVEILILPNSQASQ 253
>gi|257092877|ref|YP_003166518.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045401|gb|ACV34589.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 189
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 67/191 (35%), Gaps = 15/191 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + + ++ ++S C S K++V + + + + Q ++Q
Sbjct: 1 MNARIVFPLLLVASLSACVSQSTYKQEVQQVDTLSVQ------NKAYAQLTQQLQTEIQA 54
Query: 61 TGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + ++ +T + V + K + I L I ++ +TD+
Sbjct: 55 DQVKIKQLEGRLTVTLVDEIVFSSGSAEMNMKGRATIDKIVGTLQNAAGKRIVVEGYTDN 114
Query: 120 IG-------TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
N +S RA + +Q + GF P+ NDT GR
Sbjct: 115 TPIGPGLRSRYPTNWELSTARACDVVR-YLQAAGIDPVRLEAAGFGEYQPVAANDTPAGR 173
Query: 173 QNNQRIEIQIF 183
N+RI+I +
Sbjct: 174 SQNRRIDIVLM 184
>gi|322417908|ref|YP_004197131.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320124295|gb|ADW11855.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 169
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 75/183 (40%), Gaps = 16/183 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ ++ + T++G A + K + G+ L + + +
Sbjct: 1 MLKKAAIAAVLSMTVAGVAYAGLDAVKGLGKDLGKEAAATAKEGA-LSAVTKKLKKVQNE 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G + ++ + IA I+ +P + + HTD++
Sbjct: 60 KGP---------------IKFKTGKAEVDPACDRTMTAIAAIMTDYPGFHVQVDGHTDNV 104
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + N+ +SQ+RAD + YL ++ + +S +GF PI +N TK G+ N+R++
Sbjct: 105 GKPEANMKLSQDRADAVVKYLAEKKGVDAKRLSAKGFGDTQPIASNKTKAGQAKNRRVDF 164
Query: 181 QIF 183
+
Sbjct: 165 TVT 167
>gi|298372486|ref|ZP_06982476.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298275390|gb|EFI16941.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 567
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ + I + + ++ L + L A L + P+ I I HTDS G+
Sbjct: 448 VYMQPIKTGTSFVVKNIYFNTNDTSLTAESNKELDKQAKFLKENPNVNITIVGHTDSRGS 507
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ NL +S+ RA + LI R + + G P+ +N+T+ GR N+RIEI++
Sbjct: 508 DEYNLKLSEGRAVSVMRALIDR-GIAPERLKAEGRGETQPVASNETEEGRAENRRIEIEV 566
>gi|206891094|ref|YP_002249885.1| peptidoglycan-associated lipoprotein [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206743032|gb|ACI22089.1| peptidoglycan-associated lipoprotein [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 182
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 6/186 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK + L++F + I C E+K T IV K G+ ++K + + + T
Sbjct: 3 IKIILLAIFCLFLIIACA----ERKIYMPDGKETTGIVKKEEGNEIEKTKPS-EEETSFT 57
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
++ + + I + + + LP L+ +A+ L K+P + I+ H D G
Sbjct: 58 TSQMAELIKKLQEEIGDIHFDYDKYDVRQDDLPTLKKVASYLQKYPKLRVIIEGHCDERG 117
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
T + N + Q+RAD K YLI G+ S+R + + + P+ T + Q N+R
Sbjct: 118 TNEYNFALGQKRADSAKQYLITLGIISSRIDIIS-YGEEKPLCTEQNESCWQKNRRAHFV 176
Query: 182 IFPRGN 187
G
Sbjct: 177 FIEEGK 182
>gi|77165507|ref|YP_344032.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|76883821|gb|ABA58502.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
Length = 286
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 7/156 (4%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
++ K DK E + + + + V L
Sbjct: 129 EARQAKEQAKMAEIRADKLEKRLAE------LNAEKTERGYVLTLGDILFEVDSAELTSG 182
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ L + T L ++P + ++ HTDS G+ N+ +SQ RAD + + +
Sbjct: 183 GMQNLFRLVTFLKEYPDREVVVEGHTDSTGSAVYNMELSQRRADSVY-LFLVNNGIAPDR 241
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
I G+ YP+ N+T GRQ N+R+EI I G
Sbjct: 242 IVAHGYGQGYPVAPNNTTAGRQKNRRVEIVILGAGK 277
>gi|182682319|ref|YP_001830479.1| OmpA/MotB domain-containing protein [Xylella fastidiosa M23]
gi|182632429|gb|ACB93205.1| OmpA/MotB domain protein [Xylella fastidiosa M23]
gi|307578598|gb|ADN62567.1| OmpA/MotB domain-containing protein [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 375
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 61/145 (42%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
G ++ +D+ I ++ + + L + +L+
Sbjct: 229 AELDSDGDGVNDCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSKLRPDAVAVLK 288
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IL ++P + + HTDS G N +S+ RA V+ YL G+ ++R I G+
Sbjct: 289 EATEILRRYPDLHVEVAGHTDSTGPAAYNKKLSERRAKVVYDYLRNNGIDASRLIGPVGY 348
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
+PIDTN T GR N+R E+ +
Sbjct: 349 GETHPIDTNKTPAGRAKNRRTELNV 373
>gi|220919426|ref|YP_002494730.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219957280|gb|ACL67664.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 206
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 76/206 (36%), Gaps = 30/206 (14%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREK--------------------KKVFLHKSNDTD 37
M K L ++ + +GC A + KK L +
Sbjct: 1 MNKTSLRLTAAVTAVLLFAGCQTAGKRTAIGAGAGGLAGAGVGALLGGKKGALIGAGVGA 60
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
+ G LDK E + R + + + + F L+ + + L
Sbjct: 61 LAGGSVGLYLDKQHKELEKI-----AETKRTENGLLVEMKGDILFDSGSSALKPEAISKL 115
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ + +L K+ I I+ +TD+ G+ N +S RAD +K L+ R + I+ G
Sbjct: 116 EQMGDVLAKYGDDRIRIEGYTDATGSKSMNEELSLRRADAVKRVLVGR-GVQEKQITALG 174
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
P+ N T GR N+R+E+ I
Sbjct: 175 MGPVRPVADNGTSAGRAQNRRVELHI 200
>gi|15836945|ref|NP_297633.1| outer membrane protein [Xylella fastidiosa 9a5c]
gi|9105169|gb|AAF83153.1|AE003886_12 outer membrane protein [Xylella fastidiosa 9a5c]
Length = 389
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 61/145 (42%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
G ++ +D+ I ++ + + L + +L+
Sbjct: 243 AELDSDGDGVNDCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSKLRPDAVAVLK 302
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IL ++P + + HTDS G N +S+ RA V+ YL G+ ++R I G+
Sbjct: 303 EATEILRRYPDLHVEVAGHTDSTGPAAYNKKLSERRAKVVYDYLRNNGIDASRLIGPVGY 362
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
+PIDTN T GR N+R E+ +
Sbjct: 363 GETHPIDTNKTPAGRAKNRRTELNV 387
>gi|28199584|ref|NP_779898.1| outer membrane protein [Xylella fastidiosa Temecula1]
gi|28057699|gb|AAO29547.1| outer membrane protein [Xylella fastidiosa Temecula1]
Length = 389
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 61/145 (42%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
G ++ +D+ I ++ + + L + +L+
Sbjct: 243 AELDSDGDGVNDCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSKLRPDAVAVLK 302
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IL ++P + + HTDS G N +S+ RA V+ YL G+ ++R I G+
Sbjct: 303 EATEILRRYPDLHVEVAGHTDSTGPAAYNKKLSERRAKVVYDYLRNNGIDASRLIGPVGY 362
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
+PIDTN T GR N+R E+ +
Sbjct: 363 GETHPIDTNKTPAGRAKNRRTELNV 387
>gi|71276570|ref|ZP_00652844.1| OmpA/MotB [Xylella fastidiosa Dixon]
gi|71901217|ref|ZP_00683319.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|170730957|ref|YP_001776390.1| outer membrane protein [Xylella fastidiosa M12]
gi|71162641|gb|EAO12369.1| OmpA/MotB [Xylella fastidiosa Dixon]
gi|71729028|gb|EAO31157.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|167965750|gb|ACA12760.1| outer membrane protein [Xylella fastidiosa M12]
Length = 375
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 61/145 (42%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
G ++ +D+ I ++ + + L + +L+
Sbjct: 229 AELDSDGDGVNDCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSKLRPDAVAVLK 288
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IL ++P + + HTDS G N +S+ RA V+ YL G+ ++R I G+
Sbjct: 289 EATEILRRYPDLHVEVAGHTDSTGPAAYNKKLSERRAKVVYDYLRNNGIDASRLIGPVGY 348
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
+PIDTN T GR N+R E+ +
Sbjct: 349 GETHPIDTNKTPAGRAKNRRTELNV 373
>gi|71898965|ref|ZP_00681131.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|71731211|gb|EAO33276.1| OmpA/MotB [Xylella fastidiosa Ann-1]
Length = 375
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 61/145 (42%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
G ++ +D+ I ++ + + L + +L+
Sbjct: 229 AELDSDGDGVNDCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSKLRPDAVAVLK 288
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IL ++P + + HTDS G N +S+ RA V+ YL G+ ++R I G+
Sbjct: 289 EATEILRRYPDLHVEVAGHTDSTGPAAYNKKLSERRAKVVYDYLRNNGIDASRLIGPVGY 348
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
+PIDTN T GR N+R E+ +
Sbjct: 349 GETHPIDTNKTPAGRAKNRRTELNV 373
>gi|70729258|ref|YP_258995.1| outer membrane protein OprF [Pseudomonas fluorescens Pf-5]
gi|68343557|gb|AAY91163.1| outer membrane protein OprF [Pseudomonas fluorescens Pf-5]
gi|154759407|gb|ABS85198.1| major outer membrane porin [Pseudomonas fluorescens]
Length = 325
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 47/102 (46%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P T ++ HTDS+G N +S+ RA+ +
Sbjct: 216 DVKFDFDKSVVKPNSYADIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSERRANAV 275
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
K L+ + + G+ P+ N T+ GR N+R+E
Sbjct: 276 KQVLVNQYGVGANRVQSVGYGESRPVADNATEAGRAVNRRVE 317
>gi|4580966|gb|AAD24553.1|AF117961_1 OprF [Pseudomonas chlororaphis subsp. aureofaciens]
Length = 325
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 50/110 (45%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P T ++ HTDS+G N +S+ RA+ +
Sbjct: 216 DVKFDFDKSVVKPNSYADIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSERRANAV 275
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
K L + + + G+ P+ N T+ GR N+R+E Q+ +
Sbjct: 276 KQVLTSQYGVESSRVQSVGYGESRPVADNATEAGRAVNRRVEAQVEAQAK 325
>gi|16078432|ref|NP_389251.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis
str. 168]
gi|221309232|ref|ZP_03591079.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis
str. 168]
gi|221313560|ref|ZP_03595365.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221318482|ref|ZP_03599776.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221322755|ref|ZP_03604049.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis
str. SMY]
gi|321315123|ref|YP_004207410.1| flagellar motor protein MotB [Bacillus subtilis BSn5]
gi|127250|sp|P28612|MOTB_BACSU RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
MotB
gi|143208|gb|AAA22603.1| motility protein B [Bacillus subtilis]
gi|2633739|emb|CAB13241.1| motility protein B; MotB component of the stator flagellum complex
[Bacillus subtilis subsp. subtilis str. 168]
gi|320021397|gb|ADV96383.1| flagellar motor protein MotB [Bacillus subtilis BSn5]
Length = 261
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 5/155 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
+ + + E + + + + + + I + F + + K+ +P+
Sbjct: 100 AADQEELENVKSQVEKFIKDKKLEHQLETKMTSEGLLITIKDSIFFDSGKATIRKEDVPL 159
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ I+ +L P I I HTD++ ++N +S RA LI+ +
Sbjct: 160 AKEISNLLVINPPRNIIISGHTDNMPIKNSEFQSNWHLSVMRAVNFMGLLIENPKLDAKV 219
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +G+ P+ +N T GR N+R+E+ I PRG
Sbjct: 220 FSAKGYGEYKPVASNKTAEGRSKNRRVEVLILPRG 254
>gi|124007829|ref|ZP_01692531.1| outer membrane protein [Microscilla marina ATCC 23134]
gi|123986775|gb|EAY26556.1| outer membrane protein [Microscilla marina ATCC 23134]
Length = 715
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ V + L+ L + + +P+ I + HTD+ G+ NL +S++R
Sbjct: 605 IRLNNLFFDVGKSALKSSSFAELNRLVNSMKNYPNMTIEVSGHTDAQGSPAKNLQLSKDR 664
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
A+ + +YL +G+ ++R +G+ P+ TN T GR N+R+E I +
Sbjct: 665 ANAVLNYLKSKGIPASRM-QAKGYGQTKPLATNGTAQGRARNRRVEFMILKK 715
>gi|254433641|ref|ZP_05047149.1| OmpA family protein [Nitrosococcus oceani AFC27]
gi|207089974|gb|EDZ67245.1| OmpA family protein [Nitrosococcus oceani AFC27]
Length = 293
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 7/156 (4%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
++ K DK E + + + + V L
Sbjct: 136 EARQAKEQAKMAEIRADKLEKRLAE------LNAEKTERGYVLTLGDILFEVDSAELTSG 189
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ L + T L ++P + ++ HTDS G+ N+ +SQ RAD + + +
Sbjct: 190 GMQNLFRLVTFLKEYPDREVVVEGHTDSTGSAVYNMELSQRRADSVY-LFLVNNGIAPDR 248
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
I G+ YP+ N+T GRQ N+R+EI I G
Sbjct: 249 IVAHGYGQGYPVAPNNTTAGRQKNRRVEIVILGAGK 284
>gi|152969879|ref|YP_001334988.1| putative outer membrane protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150954728|gb|ABR76758.1| putative outer membrane protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 568
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V R+ + + + + L+ L + P +I + HTDS+G K
Sbjct: 423 VQRVAPNVIRLDSMSLFDTGKWVLKPGSTKRLVNSLMDIKARPGWLIVVAGHTDSVGEEK 482
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N L+S +RA+ ++ ++ G + +V+G+ PI TNDT GR N+R+EI + P
Sbjct: 483 ANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISLVP 542
Query: 185 R 185
+
Sbjct: 543 Q 543
>gi|42526179|ref|NP_971277.1| OmpA family protein [Treponema denticola ATCC 35405]
gi|41816291|gb|AAS11158.1| OmpA family protein [Treponema denticola ATCC 35405]
Length = 422
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 62/145 (42%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
K+ + ++ + L + + + +T I + L + L+ I
Sbjct: 278 KKIDKAAEEEIKKSVEDLNLENTTIEKTDEGLTISIENIQFLPNSAILRESEKEKLKKIG 337
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
IL KFP I HT GT + +S+ERA + +YLI+ GV + RGF +
Sbjct: 338 EILLKFPDREFLISGHTALAGTEEERQALSEERAAAVANYLIELGVQKREHVYTRGFGAR 397
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPR 185
P+ N++ N+R+EI I +
Sbjct: 398 RPVAANNSPENMAKNRRVEITILDK 422
>gi|261252277|ref|ZP_05944850.1| Flagellar motor rotation protein MotB [Vibrio orientalis CIP
102891]
gi|260935668|gb|EEX91657.1| Flagellar motor rotation protein MotB [Vibrio orientalis CIP
102891]
Length = 313
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + + +++ + ++ + + +++ I V +G I I
Sbjct: 132 STQNNQNSESDSQQQQSAEMSQELETLMESIKKALEREIEQGAIEVENLGQQIDIRIREK 191
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERA 134
+F FL+ KF P+++ IA ++ P I + HTD+ ++N +S +RA
Sbjct: 192 GAFPEGSAFLQPKFRPLVRQIADLVKDVPG-RIRVSGHTDNQRIDSELYRSNWDLSAQRA 250
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + ++ + VRG A P+ NDT+ R N+R+EI I
Sbjct: 251 VSVAQEMEKVRGFNHERLRVRGMADTEPLGPNDTEAQRSRNRRVEISIM 299
>gi|325274538|ref|ZP_08140599.1| OmpF family protein [Pseudomonas sp. TJI-51]
gi|324100318|gb|EGB98103.1| OmpF family protein [Pseudomonas sp. TJI-51]
Length = 345
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 64/175 (36%), Gaps = 10/175 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G +D N ++DK D + V G +
Sbjct: 177 GGSPKQTAAPAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEV 230
Query: 77 P----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ ++ +A + ++P T ++ HTDS+G N +S+
Sbjct: 231 VRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSER 290
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
RA+ +K L Q+ + + G+ P+ N T+ GR N+R+E Q+ +
Sbjct: 291 RANAVKQVLTQQYGVESSRVDSVGYGETRPVADNATEEGRAINRRVEAQVEAQAK 345
>gi|56461234|ref|YP_156515.1| flagellar motor protein MotB [Idiomarina loihiensis L2TR]
gi|56180244|gb|AAV82966.1| Flagellar motor protein [Idiomarina loihiensis L2TR]
Length = 312
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S ++ +T+ + + + + E + + +++ I + + G I I S
Sbjct: 133 SDSADDQKEAEAENTEAMTQVSKELMRRIERQLENEIKAGTIELEQHGQQIIIRIREQGS 192
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADV 136
F FL+ +F P++Q +A L P + I H+D+ ++ +S +RA
Sbjct: 193 FPEGSAFLQPQFRPIIQQVAGALKDIPG-EVTISGHSDNEKLVSEIYSSDWDLSSKRAVA 251
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +++ S + V G++ P+ N+++ R+ N+R+EI I
Sbjct: 252 VAEEMLKVDDFSEDRLVVMGYSDTKPLVPNNSEENRKRNRRVEISIM 298
>gi|58581292|ref|YP_200308.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58425886|gb|AAW74923.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 181
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 72/188 (38%), Gaps = 19/188 (10%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L +S+ + ++GC +E + + + + S L
Sbjct: 10 MNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATNTTAGSSVPTGPSTSGL---------- 59
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + + L+ +F ++ A L PS+ I +Q +
Sbjct: 60 -----YGPGDLDTDACLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNA 114
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ + N+ + + R + + S L G S+++ ++V + + P+ T + N+R
Sbjct: 115 DERGSREYNMGLGERRGNAVSSSLQAAGGSASQ-LTVVSYGEERPVCTESNESCWSQNRR 173
Query: 178 IEIQIFPR 185
+EI +
Sbjct: 174 VEIVYTAQ 181
>gi|113968724|ref|YP_732517.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113883408|gb|ABI37460.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 202
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 77/185 (41%), Gaps = 6/185 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L L M + ++GC + R+ + + ++ + G + +A + +
Sbjct: 1 MKTLILFMSVAL-LAGCSM--RDTVNIEEMTTTQAYDLSDKDGDGVIEARERCNDTAKGA 57
Query: 62 GIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G G + + ++ ++ P ++ IA L ++P+T + I+ HT
Sbjct: 58 GTDNYGCGQVKAINERKEINVLFPNDSAYIAPEYYPQIEEIAMFLRQYPTTKVTIEGHTS 117
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N ++SQERAD + + L R ++ G+ P+ T N+R+
Sbjct: 118 RTGTDERNAVLSQERADAVTAVLADRFSIDRSRLTAIGYGSSRPLVLEHTPDAETRNRRV 177
Query: 179 EIQIF 183
++
Sbjct: 178 VAEVT 182
>gi|21243867|ref|NP_643449.1| outer membrane protein P6 [Xanthomonas axonopodis pv. citri str.
306]
gi|21109468|gb|AAM37985.1| outer membrane protein P6 precursor [Xanthomonas axonopodis pv.
citri str. 306]
Length = 181
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 19/188 (10%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L +S+ + ++GC +E + + + S L
Sbjct: 10 MNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATDTTAGSSVPTGPSTSGL---------- 59
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + + L+ +F ++ A L PS+ I +Q +
Sbjct: 60 -----YGPGDLDADACLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNA 114
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ + N+ + + R + + S L G S+++ ++V + + P+ T + N+R
Sbjct: 115 DERGSREYNMGLGERRGNAVSSSLQAAGGSASQ-LTVVSYGEERPVCTESNESCWSQNRR 173
Query: 178 IEIQIFPR 185
+EI +
Sbjct: 174 VEIVYTAQ 181
>gi|330014716|ref|ZP_08307964.1| OmpA family protein [Klebsiella sp. MS 92-3]
gi|328532776|gb|EGF59559.1| OmpA family protein [Klebsiella sp. MS 92-3]
Length = 568
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V R+ + + + + L+ L + P +I + HTDS+G K
Sbjct: 423 VQRVAPNVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSVGEEK 482
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N L+S +RA+ ++ ++ G + +V+G+ PI TNDT GR N+R+EI + P
Sbjct: 483 ANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISLVP 542
Query: 185 R 185
+
Sbjct: 543 Q 543
>gi|124006466|ref|ZP_01691299.1| outer membrane protein [Microscilla marina ATCC 23134]
gi|123987879|gb|EAY27559.1| outer membrane protein [Microscilla marina ATCC 23134]
Length = 693
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + ++ L+ P L + IL K P I I HTD+ G+ NL
Sbjct: 578 NQGQSIRLNNLFFDYNQDTLKPSSYPELNRLIKILQKHPQMNIEISGHTDAHGSADKNLT 637
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+SQ RA+ + YL + + + + +G+ P+ N T GR N+R+E I
Sbjct: 638 LSQARANSVLRYLTTQ-GIAKQRLRAKGYGQGRPVANNTTVAGRALNRRVEFLILKE 693
>gi|325523338|gb|EGD01688.1| Outer membrane protein [Burkholderia sp. TJI49]
Length = 552
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 49/106 (46%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L+ + ++ P I + +TD++G +NL +S RA ++
Sbjct: 443 SLFDSGKAQLKPDSTRAMVGALEMIKTHPDKRILVAGYTDNVGHPDSNLKLSVARAQAVR 502
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+LI+ +++G+ PI NDT GR N+R+EI + P
Sbjct: 503 DWLIEASGIPATQFAIQGYGDTRPIADNDTPEGRARNRRVEITLVP 548
>gi|4580967|gb|AAD24554.1|AF117962_1 OprF [Pseudomonas chlororaphis subsp. chlororaphis]
Length = 325
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 48/105 (45%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + + P T ++ HTDS+G N +S+ RA+ +
Sbjct: 216 DVKFDFDKSVVKPNSYADIKNLADFMKQNPQTTTVVEGHTDSVGPDAYNQKLSERRANAV 275
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K L + + + G+ P+ N T+ GR N+R+E Q+
Sbjct: 276 KQVLTSQYGVESSRVQSVGYGESRPVADNATEAGRAVNRRVEAQV 320
>gi|78048827|ref|YP_365002.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|294626855|ref|ZP_06705447.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294665412|ref|ZP_06730700.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|325929356|ref|ZP_08190486.1| peptidoglycan-associated lipoprotein [Xanthomonas perforans 91-118]
gi|78037257|emb|CAJ25002.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|292598869|gb|EFF43014.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292604823|gb|EFF48186.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|325540268|gb|EGD11880.1| peptidoglycan-associated lipoprotein [Xanthomonas perforans 91-118]
Length = 172
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 19/188 (10%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L +S+ + ++GC +E + + + S L
Sbjct: 1 MNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATDTTAGSSVPTGPSTSGL---------- 50
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + + L+ +F ++ A L PS+ I +Q +
Sbjct: 51 -----YGPGDLDTDACLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNA 105
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ + N+ + + R + + S L G S+++ ++V + + P+ T + N+R
Sbjct: 106 DERGSREYNMGLGERRGNAVSSSLQAAGGSASQ-LTVVSYGEERPVCTESNESCWSQNRR 164
Query: 178 IEIQIFPR 185
+EI +
Sbjct: 165 VEIVYTAQ 172
>gi|325279770|ref|YP_004252312.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
20712]
gi|324311579|gb|ADY32132.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
Length = 625
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T + V + L + P L+ + L + P I I HTD+ G+ ++N +S+
Sbjct: 516 TLVLKGIFFDVDDYRLRPESYPELRQLVVFLKQNPEVKIEISGHTDNTGSDQHNYRLSEN 575
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + YL + R +G+ P+ TNDT+ GR+ N+R EI++
Sbjct: 576 RAFEVYKYLFLNHIQKERM-EYKGYGKDRPLRTNDTEEGRKENRRTEIRV 624
>gi|312887507|ref|ZP_07747103.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311299995|gb|EFQ77068.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 630
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ + I + ++ ++ + L + LN PS I + HTD++G
Sbjct: 510 VPLQAIETGNKVILKNIFFDTNKYDIKDESKTELAKLIAFLNDNPSVKIEVSGHTDNVGV 569
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YLI + +S NR + +G+ PI N + GR+ N+R E +I
Sbjct: 570 DAINQTLSQNRAKAVYQYLIGQHISPNRLVY-KGYGKAQPIAPNTNEEGRKLNRRTEFKI 628
Query: 183 F 183
Sbjct: 629 I 629
>gi|296329693|ref|ZP_06872178.1| flagellar motor protein MotB [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305674090|ref|YP_003865762.1| motility protein B; MotB component of the stator flagellum complex
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296153191|gb|EFG94055.1| flagellar motor protein MotB [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305412334|gb|ADM37453.1| motility protein B; MotB component of the stator flagellum complex
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 261
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 5/155 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
K + + E + + + + + + I + F + + K+ +P+
Sbjct: 100 AADQKELENVKSQVEKFIKDKKLEHQLETKMTSEGLLITIKDSIFFDSGKATIRKEDVPL 159
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ I+ +L P I I HTD++ ++N +S RA LI+ +
Sbjct: 160 AKEISNLLVINPPRNIIISGHTDNMPIKNSEFQSNWHLSVMRAVNFMGLLIENPKLDAKV 219
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +G+ P+ +N T GR N+R+E+ I PRG
Sbjct: 220 FSAKGYGEYKPVASNKTAEGRSKNRRVEVLILPRG 254
>gi|110834388|ref|YP_693247.1| OmpA family protein [Alcanivorax borkumensis SK2]
gi|110647499|emb|CAL16975.1| OmpA family protein [Alcanivorax borkumensis SK2]
Length = 362
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 68/164 (41%), Gaps = 6/164 (3%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM-QLQDTGIVVSRIGDMITCYIPVHVS 81
++ + + + D D+ + Q ++ G +++ T
Sbjct: 204 ETREVEKIVEVSAPDSDGDGIPDDRDQCPNTIQGGKVDGEGCLLTNQ----TITFNNIGF 259
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ + P+L + L + + I HTDS G+ + N +S RA ++ YL
Sbjct: 260 ELDSANITASSRPILDRLVKALKSQTNFDVEIAGHTDSSGSAEYNEGLSDRRAKAVRQYL 319
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
I + S+ ++ RG+ P+ +N+T GR N+R+E ++ +
Sbjct: 320 IDQ-GISSERLTARGYGEVVPVASNETASGRAMNRRVEFRVSEQ 362
>gi|88810227|ref|ZP_01125484.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
gi|88791857|gb|EAR22967.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
Length = 263
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 3/143 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ + + + QL + + + I + + L+ L +AT L
Sbjct: 124 ETQQRQIEVLREQLAE--LKPKQTEQGIMLTLSHVLFAFDSARLQSAAQAPLDKLATYLR 181
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ P + I +TDS G N +S+ RA + + + + V G P+
Sbjct: 182 ERPQIQVKIVGYTDSTGAANYNQRLSKRRAQSVADAMA-QRGVERASMRVVGRGESNPVA 240
Query: 165 TNDTKVGRQNNQRIEIQIFPRGN 187
+N T+ GRQ N+R+E + + N
Sbjct: 241 SNATEQGRQLNRRVEFTLLNQAN 263
>gi|305665914|ref|YP_003862201.1| Thrombospondin type 3 repeat:OmpA/MotB [Maribacter sp. HTCC2170]
gi|88710689|gb|EAR02921.1| Thrombospondin type 3 repeat:OmpA/MotB [Maribacter sp. HTCC2170]
Length = 446
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 15/167 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC ++ V D+ + + +E Q QL D +
Sbjct: 294 GCPWTDKDGDSVLDKDDQCPDVAGTVANNGCPEVTEEVQKQLNDYARTI----------- 342
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + ++ + ++ I IL+++P+ ++ HTDS+G+ K N +S+ RA+
Sbjct: 343 ---LFDTGKSSIKAESTSVMVDIIQILSEYPTAKFTVEGHTDSVGSAKLNQTLSESRANS 399
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++ +LI + + +S G+ PI TN+T+ GR+ N+R+EI +
Sbjct: 400 VRDFLIDK-GIGSSRLSAIGYGEDKPIATNNTRSGRKQNRRVEINLV 445
>gi|110638331|ref|YP_678540.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281012|gb|ABG59198.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 424
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 68/166 (40%), Gaps = 2/166 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFG-SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
+ E K + ++ + K + +++ V + +
Sbjct: 258 AVVQDEPVKPAVIENTTVVSTTTILQPADTSKQIKTTKTEIKPKDESVFDVKKGDKIVLK 317
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ S+ + L + +N+ P I + HTD+ G NL +S+ERA +
Sbjct: 318 HVLFVQSKDDFLPESYAELDRLVATMNQHPQITIEVSGHTDNQGNRDLNLKLSEERAIKV 377
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K YL+ R + I+V+G+ PI NDT+ R+ N+R+E +I
Sbjct: 378 KDYLVSR-GIEAKRINVKGYGPDKPISANDTEEHRRLNRRVEFEII 422
>gi|88859188|ref|ZP_01133829.1| flagellar motor protein [Pseudoalteromonas tunicata D2]
gi|88819414|gb|EAR29228.1| flagellar motor protein [Pseudoalteromonas tunicata D2]
Length = 290
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 7/173 (4%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ +++ ++ + K + + Q+QD I + +G I I + SF
Sbjct: 112 SQSTAKSEAAASEKTADQEQVNELVKKIAQQLEEQIQDGAIELESLGQQIIIRIRENGSF 171
Query: 83 V-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVI 137
FL+ +F P++Q IA +L P I + HTD NN +S +R+ +
Sbjct: 172 PSGSAFLQPQFKPIIQKIADLLKDVPG-EITVSGHTDDYQVSNELYFNNWDLSAKRSVAV 230
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
S + + + V G A P+ N+ R+ N+R+EI I +G K+
Sbjct: 231 ASEMQKVSGFDKNRMVVIGHADTRPLVPNEDSESRKRNRRVEISIM-QGKAKE 282
>gi|297618036|ref|YP_003703195.1| OmpA/MotB domain protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145873|gb|ADI02630.1| OmpA/MotB domain protein [Syntrophothermus lipocalidus DSM 12680]
Length = 258
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 72/196 (36%), Gaps = 17/196 (8%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS------LDKAEDEFQMQLQ 59
L+ + +SG ++ E + + I+ + G + L+ E + ++
Sbjct: 52 ALANSLSMVLSGKSISIMETPGPSVVEGRSGQIIREGQGDTPTLQGNLEAIEKQLAEYIK 111
Query: 60 D-----TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
IV+ + + + F L + +++ + L P+ + +
Sbjct: 112 SEEGLAGNIVLMEQERGLVISLKDTLLFPKGSDVLTPRAHEIIRKVGESLKTIPNY-VRV 170
Query: 114 QSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ HTD + +N +S RA + L +S G+ P+ ND++
Sbjct: 171 EGHTDDLPINTPKFPSNWELSVLRATNVVHVLAGEVGIPPDRLSATGYGEYRPLMPNDSE 230
Query: 170 VGRQNNQRIEIQIFPR 185
R N+R++I I +
Sbjct: 231 PNRAMNRRVDIVILKQ 246
>gi|326798930|ref|YP_004316749.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326549694|gb|ADZ78079.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 229
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + + G +DK E + + G V + G+ I
Sbjct: 53 KKAGNTAVGAIIGGALGGVAGGLIGKKMDKQAAEIERTV--DGAEVVQAGEGIIVKFDSG 110
Query: 80 VSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ F + L+ + ++ + LN P T I I HTD+ GT + N +S+ RA +K
Sbjct: 111 ILFGFDQTALKPEAQTNIKNLVKSLNDNPDTDILIIGHTDNKGTAEYNQGLSERRAAAVK 170
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+Y + +G+SS+R + G ++ PI N T+ GR N+R+EI I +K+
Sbjct: 171 NYAVAQGLSSSRAKT-EGKSFNEPIADNSTEAGRAQNRRVEIVIVANEKMKE 221
>gi|147678453|ref|YP_001212668.1| flagellar motor protein [Pelotomaculum thermopropionicum SI]
gi|146274550|dbj|BAF60299.1| flagellar motor protein [Pelotomaculum thermopropionicum SI]
Length = 255
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 15/192 (7%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDI-----VNKRFGSSLDKAEDEFQMQLQD 60
++M + + + G E + + + + L+ E Q ++
Sbjct: 51 AIAMSLASAMGGGQSVMTEPGASLAPGVSGSSLPADLGQAAAEAADLESLRRELQEYIEQ 110
Query: 61 TG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
G + V+ + F L + + I IL K P+ I ++
Sbjct: 111 NGLTGRVSVNLEERGLVLSFLDVALFPLGSARLTPEAQETVGKIGKILLKAPNY-IRVEG 169
Query: 116 HTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
HTD++ N +S RA + LI + +S G+ P ND+
Sbjct: 170 HTDNLPINTREFPSNWELSVARATSVVQELIHKLNFPPERLSATGYGEFRPRMPNDSAEH 229
Query: 172 RQNNQRIEIQIF 183
RQ N+R+++ I
Sbjct: 230 RQQNRRVDLVIL 241
>gi|262194964|ref|YP_003266173.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262078311|gb|ACY14280.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 623
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
D I ++ + + P+L+ +A +LN P + ++ HTD G N +
Sbjct: 502 DGSIEIIEKVYFPNNQARILPRSFPVLKEVARVLNNHPDIELRVEGHTDDRGNDTYNRKL 561
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
SQ RAD + ++L+++ + +S +GF + PI N + GR N+R+E I
Sbjct: 562 SQRRADSVVAFLVEQ-GIAAERLSAKGFGEERPIADNASAQGRDQNRRVEFVITN 615
>gi|260551454|ref|ZP_05825638.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. RUH2624]
gi|260405448|gb|EEW98941.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. RUH2624]
Length = 191
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 66/184 (35%), Gaps = 10/184 (5%)
Query: 1 MIKELGLSMF----IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M+K + F + ++GC +K + T + + L +
Sbjct: 4 MMKSIKYLAFPLLSVALVMTGCAS-----RKPATTANAGTTNPSTVNTTGLSEDAALNAQ 58
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L + V L + LQ A L ++ +A+ H
Sbjct: 59 NLAGASSKGVTEANKAALAKRVVHFDYDSSDLSAEDYQTLQAHAQFLMANANSKVALTGH 118
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD GT + N+ + + RA ++SYLI + + + + + P++ + + N+
Sbjct: 119 TDERGTREYNMALGERRAKAVQSYLIT-SGVNPQQLEAVSYGKEAPVNPGHDESAWKENR 177
Query: 177 RIEI 180
R+EI
Sbjct: 178 RVEI 181
>gi|161504616|ref|YP_001571728.1| hypothetical protein SARI_02730 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865963|gb|ABX22586.1| hypothetical protein SARI_02730 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 574
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 53/109 (48%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L+ ML + P +I + HTD+ G K N +S +RA+ ++
Sbjct: 443 SLFDSGKSALKAGSTRMLVNSLVGIKAKPGWLIVVSGHTDNTGNPKLNQTLSLKRAEAVR 502
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ G +V+G+ PI TNDT GR N+R+EI + P+ N
Sbjct: 503 NWMRDTGDVPESCFAVQGYGESRPIATNDTPEGRALNRRVEISLVPQAN 551
>gi|21232447|ref|NP_638364.1| outer membrane protein P6 precursor [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767470|ref|YP_242232.1| outer membrane protein P6 precursor [Xanthomonas campestris pv.
campestris str. 8004]
gi|188990576|ref|YP_001902586.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
campestris str. B100]
gi|21114228|gb|AAM42288.1| outer membrane protein P6 precursor [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572802|gb|AAY48212.1| outer membrane protein P6 precursor [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732336|emb|CAP50528.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
campestris]
Length = 172
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 19/188 (10%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L +S+ + ++GC +E + + S L
Sbjct: 1 MNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATDTTAGSTAPTGPSTSGL---------- 50
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + + L+ +F ++ A L PS+ I +Q +
Sbjct: 51 -----YGPGDLDTDACLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNA 105
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ + N+ + + R + + S L G S+++ ++V + + P+ T ++ N+R
Sbjct: 106 DERGSREYNMGLGERRGNAVSSALQAAGGSASQ-LTVVSYGEERPVCTETSESCWSQNRR 164
Query: 178 IEIQIFPR 185
+EI +
Sbjct: 165 VEIVYTAQ 172
>gi|323495403|ref|ZP_08100480.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
gi|323310326|gb|EGA63513.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
Length = 322
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ ++ L+++ +L + +N++P + I +TDS G N +S++RA
Sbjct: 210 VDSGSFALNSSELKEESKSILDELVQFMNQYPQANVEITGYTDSSGAAAYNQKLSEKRAQ 269
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + ++ + I+V G PI +N+T+ GR+ N+R+EI +
Sbjct: 270 SVAN-ALESEGIDSSRITVSGEGENNPIASNETREGREQNRRVEIVV 315
>gi|167032610|ref|YP_001667841.1| OmpF family protein [Pseudomonas putida GB-1]
gi|166859098|gb|ABY97505.1| OmpF family protein [Pseudomonas putida GB-1]
Length = 344
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 4/126 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++P T ++ H
Sbjct: 214 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGH 273
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS+G N +S+ RA+ +K L Q+ + + G+ P+ N T+ GR N+
Sbjct: 274 TDSVGPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSVGYGETRPVADNATEEGRAINR 333
Query: 177 RIEIQI 182
R+E Q+
Sbjct: 334 RVEAQV 339
>gi|532658|gb|AAA99311.1| antigen [Treponema pallidum]
Length = 416
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 34 NDTDIVNKRFGSSLDKAED--EFQMQLQD---TGIVVSRIGDMITCYIPVHVSFVSEVFL 88
T D A E Q L+D V + +T I L
Sbjct: 260 QGTATAKNFAPERFDPARTVVELQETLKDLHMPDAKVRETEEGVTISIENVQFDADSASL 319
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
L+ IA +L FP + + H + G++++ IS+ERADV+ YL + GV
Sbjct: 320 APSEYEKLRKIAELLRAFPDRELLVSGHAERRGSVQDQQRISEERADVVARYLQELGVVD 379
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ RG + I ND++ GR+ N+R+EI I +
Sbjct: 380 AAHVYTRGCGAQQSIAPNDSEDGRRKNRRVEITIISK 416
>gi|315180895|gb|ADT87809.1| sodium-driven polar flagellar protein [Vibrio furnissii NCTC 11218]
Length = 320
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 12/180 (6%)
Query: 15 ISGCGL--ASREKKKVFLHKSNDTDIVNKRFGSSLDK----AEDEFQMQLQDTGIVVSRI 68
++G + + + + ++ ++ + Q +++ I V +
Sbjct: 123 LTGGQSPETATQDNQNTETEMQQQQAQSQSMSEEMETVLESIKKALQREIEQGAIEVENL 182
Query: 69 GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTL 123
G I I +F FL+ KF P+++ IA ++ P + + HTD+
Sbjct: 183 GQQIVIRIREKGAFPEGSAFLQPKFRPLVRQIADLVKDVPGI-VRVSGHTDNQRLDSELY 241
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++N +S +RA + + + +++ + VRG A P+ NDT+ R N+R+EI I
Sbjct: 242 RSNWDLSAQRAVSVAQEMEKVKGFNHQRLQVRGMADTDPLGPNDTEAQRSRNRRVEISIM 301
>gi|169831941|ref|YP_001717923.1| OmpA/MotB domain-containing protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169638785|gb|ACA60291.1| OmpA/MotB domain protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 257
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 57/142 (40%), Gaps = 6/142 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
+ ++ + I ++ + I V F L ++ + IL +
Sbjct: 106 KQVQELMEEAGLTAHIEMTTEERGLVISIQDTVLFATGSADLTPTAREIMDKLGLILLQT 165
Query: 107 PSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I I+ HTD++ N +S R+ + YLI R +S G+ P
Sbjct: 166 PNY-IRIEGHTDNVPINTPRFPSNWELSAARSTSVVRYLIARHNFPPERLSATGYGEYRP 224
Query: 163 IDTNDTKVGRQNNQRIEIQIFP 184
DTNDT GRQ N+R++ +
Sbjct: 225 RDTNDTAQGRQRNRRVDFVVLS 246
>gi|325923680|ref|ZP_08185304.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas gardneri ATCC 19865]
gi|325545846|gb|EGD17076.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas gardneri ATCC 19865]
Length = 407
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
G ++ +D+ I ++ + ++ L +L
Sbjct: 258 DDDGDGVNNCDDKCPASQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAQSILSEAT 317
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
IL ++P + + HTDS GT N +S+ RA + YL + GV ++R + G+
Sbjct: 318 EILKRYPDLKVEVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGES 377
Query: 161 YPIDTN------DTKVGRQNNQRIEIQI 182
PI N D GR N+R E+ +
Sbjct: 378 RPIAPNANPDGSDNPEGRAKNRRTELNV 405
>gi|325918947|ref|ZP_08181016.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas vesicatoria ATCC 35937]
gi|325534834|gb|EGD06761.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas vesicatoria ATCC 35937]
Length = 365
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
G ++ +D+ I ++ + ++ L +L
Sbjct: 216 DDDGDGVNNCDDKCPASQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAQSILSEAT 275
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
IL ++P + + HTDS GT N +S+ RA + YL + GV ++R + G+
Sbjct: 276 EILKRYPDLKVEVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGES 335
Query: 161 YPIDTN------DTKVGRQNNQRIEIQI 182
PI N D GR N+R E+ +
Sbjct: 336 RPIAPNANPDGSDNPEGRAKNRRTELNV 363
>gi|311104068|ref|YP_003976921.1| inner membrane lipoprotein YiaD [Achromobacter xylosoxidans A8]
gi|310758757|gb|ADP14206.1| inner membrane lipoprotein YiaD [Achromobacter xylosoxidans A8]
Length = 215
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 72/206 (34%), Gaps = 25/206 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR------------------ 42
+ + + ++GC + V
Sbjct: 6 IFNRIAVVAATGALLAGCATQQQTNTAVGTGAGAAIGAGIGALIGHGKGAAIGAGIGAVA 65
Query: 43 ---FGSSLDKAEDEFQMQLQDT-GIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFLPML 96
G + +++ Q + GI V + D + IP V + L+ LP+L
Sbjct: 66 GGLVGYNWKVVKEDVQKSGASSLGIDVVEMPDGSLKVNIPSGVSFDTDKTQLKPALLPVL 125
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A LN+ P + HTDS G L +N +S RA + + + + ++V G
Sbjct: 126 DSVARSLNQHPELRAKVVGHTDSTGALAHNQTLSVNRAKSVTD-YLGKQGVAAGRLTVEG 184
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
PI N T GR N+R+EI +
Sbjct: 185 RGPNDPIGDNATAEGRALNRRVEIYL 210
>gi|15639284|ref|NP_218733.1| outer membrane protein (tpn50) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025526|ref|YP_001933298.1| outer membrane protein TpN50 [Treponema pallidum subsp. pallidum
SS14]
gi|586110|sp|P38369|TPN50_TREPA RecName: Full=Outer membrane protein tpn50; AltName: Full=Antigen
tpp57; Flags: Precursor
gi|3322558|gb|AAC65272.1| outer membrane protein (tpn50) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|7144504|gb|AAA20517.2| TpN50 precursor [Treponema pallidum]
gi|189018101|gb|ACD70719.1| outer membrane protein TpN50 [Treponema pallidum subsp. pallidum
SS14]
gi|291059692|gb|ADD72427.1| outer membrane protein Tpn50 (Antigen tpp57) [Treponema pallidum
subsp. pallidum str. Chicago]
Length = 417
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 5/157 (3%)
Query: 34 NDTDIVNKRFGSSLDKAED--EFQMQLQD---TGIVVSRIGDMITCYIPVHVSFVSEVFL 88
T D A E Q L+D V + +T I L
Sbjct: 261 QGTATAKNFAPERFDPARTVVELQETLKDLHMPDAKVRETEEGVTISIENVQFDADSASL 320
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
L+ IA +L FP + + H G++++ IS+ERADV+ YL + GV
Sbjct: 321 APSEYEKLRKIAELLRAFPDRELLVSGHAARRGSVQDQQRISEERADVVARYLQELGVVD 380
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ RG + I ND++ GR+ N+R+EI I +
Sbjct: 381 AAHVYTRGCGAQQSIAPNDSEDGRRKNRRVEITIISK 417
>gi|332981443|ref|YP_004462884.1| OmpA/MotB domain-containing protein [Mahella australiensis 50-1
BON]
gi|332699121|gb|AEE96062.1| OmpA/MotB domain protein [Mahella australiensis 50-1 BON]
Length = 251
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 71/176 (40%), Gaps = 10/176 (5%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S ++ + ++N+ + + + Q + ++ I
Sbjct: 65 MSSVPATGGDEGQDLEQRTNEPQDEFESLYEDMQRY---IQQNNIAATVEMTENKMEILL 121
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTV--IAIQSHTDSIG----TLKNNL 127
+V F + + LP+L IA +L + + + I+ HTD++ +N
Sbjct: 122 RFKDNVLFESGKADIIPSALPVLNNIAGVLKTYKEQIGGVRIEGHTDNVPIHTVMFPSNW 181
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S RA + Y ++R +S G+ +P+ TNDT GR N+R++I I
Sbjct: 182 ELSTARAVTVLRYFVERQHLPPEMLSAVGYGEYHPVATNDTIEGRAKNRRVDIVIT 237
>gi|84623210|ref|YP_450582.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|84367150|dbj|BAE68308.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 172
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 72/188 (38%), Gaps = 19/188 (10%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L +S+ + ++GC +E + + + + S L
Sbjct: 1 MNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATNTTAGSSVPTGPSTSGL---------- 50
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + + L+ +F ++ A L PS+ I +Q +
Sbjct: 51 -----YGPGDLDTDACLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNA 105
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ + N+ + + R + + S L G S+++ ++V + + P+ T + N+R
Sbjct: 106 DERGSREYNMGLGERRGNAVSSSLQAAGGSASQ-LTVVSYGEERPVCTESNESCWSQNRR 164
Query: 178 IEIQIFPR 185
+EI +
Sbjct: 165 VEIVYTAQ 172
>gi|291483903|dbj|BAI84978.1| flagellar motor protein MotB [Bacillus subtilis subsp. natto
BEST195]
Length = 260
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 5/155 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
+ + + E + + + + + + I + F + + K+ +P+
Sbjct: 99 AADQEELENVKSQVEKFIKDKKLEHQLETKMTSEGLLITIKDSIFFDSGKATIRKEDVPL 158
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ I+ +L P I I HTD++ ++N +S RA LI+ +
Sbjct: 159 AKEISNLLVINPPRNIIISGHTDNMPIKNSEFQSNWHLSVMRAVNFMGLLIENPKLDAKV 218
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +G+ P+ +N T GR N+R+E+ I PRG
Sbjct: 219 FSAKGYGEYKPVASNKTAEGRSKNRRVEVLILPRG 253
>gi|26988814|ref|NP_744239.1| OmpF family protein [Pseudomonas putida KT2440]
gi|148548857|ref|YP_001268959.1| OmpF family protein [Pseudomonas putida F1]
gi|24983615|gb|AAN67703.1|AE016401_6 outer membrane protein OprF [Pseudomonas putida KT2440]
gi|148512915|gb|ABQ79775.1| OmpF family protein [Pseudomonas putida F1]
gi|313499790|gb|ADR61156.1| OprF [Pseudomonas putida BIRD-1]
Length = 344
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 55/131 (41%), Gaps = 4/131 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++P T ++ H
Sbjct: 214 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGH 273
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS+G N +S+ RA+ +K L Q+ + + G+ P+ N T+ GR N+
Sbjct: 274 TDSVGPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSVGYGETRPVADNATEEGRAVNR 333
Query: 177 RIEIQIFPRGN 187
R+E Q+ +
Sbjct: 334 RVEAQVEAQAK 344
>gi|323498631|ref|ZP_08103623.1| flagellar motor protein MotB [Vibrio sinaloensis DSM 21326]
gi|323316329|gb|EGA69348.1| flagellar motor protein MotB [Vibrio sinaloensis DSM 21326]
Length = 314
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + + +++ + ++ + + +++ I V +G I I
Sbjct: 132 STQNNQNSESDSQQQQSAEMSQELETLMESIKKALEREIEQGAIEVENLGQQIDIRIREK 191
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERA 134
+F FL+ KF P+++ IA ++ P I + HTD+ ++N +S +RA
Sbjct: 192 GAFPEGSAFLQPKFRPLVRQIAELVKDIPGI-IRVSGHTDNQRIESELYRSNWDLSAQRA 250
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + + + + + VRG A P+ NDT+ R N+R+EI I ++
Sbjct: 251 VSVAQEMEKVRGFTPQRLRVRGMADTEPLGPNDTEAQRSRNRRVEISIMQGEALQ 305
>gi|307545103|ref|YP_003897582.1| OmpA/MotB [Halomonas elongata DSM 2581]
gi|307217127|emb|CBV42397.1| OmpA/MotB [Halomonas elongata DSM 2581]
Length = 270
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 6/167 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMIT 73
+ G LD D G V+ +G +
Sbjct: 101 SDGDGVPDDKDQCPGTPAGVAVDAVGCPLDSDGDGVPDYQDQCPGTPAGAEVNALGCVED 160
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ L +L +A+ L + + I+ HTDS+G + N +SQ R
Sbjct: 161 LVLQDVNFEFDSAQLTMGAESVLTDVASKLRANENVRVRIEGHTDSVGPAQYNKDLSQRR 220
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
AD + S+L + + ++ G+ + P+ +NDTK GR N+R+E+
Sbjct: 221 ADSVASFLASQ-GIAANRMTTIGYGEEQPVASNDTKAGRAENRRVEL 266
>gi|260767264|ref|ZP_05876205.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
gi|260617772|gb|EEX42950.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
Length = 320
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 12/180 (6%)
Query: 15 ISGCGL--ASREKKKVFLHKSNDTDIVNKRFGSSLDK----AEDEFQMQLQDTGIVVSRI 68
++G + + + + ++ ++ + Q +++ I V +
Sbjct: 123 LTGGQSPETATQDNQNTETEMQQQQAQSQSMSEEMETVLESIKKALQREIEQGAIEVENL 182
Query: 69 GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTL 123
G I I +F FL+ KF P+++ IA ++ P + + HTD+
Sbjct: 183 GQQIVIRIREKGAFPEGSAFLQPKFRPLVRQIADLVKDVPGI-VRVSGHTDNQRLDSELY 241
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++N +S +RA + + + +++ + VRG A P+ NDT+ R N+R+EI I
Sbjct: 242 RSNWDLSAQRAVSVAQEMEKVKGFNHQRLQVRGMADTDPLGPNDTEAQRSRNRRVEISIM 301
>gi|4580972|gb|AAD24559.1|AF117967_1 OprF [Pseudomonas putida]
Length = 338
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++P T ++ H
Sbjct: 214 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGH 273
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS+G N +S+ RA+ +K L Q+ + + G+ P+ N T+ GR N+
Sbjct: 274 TDSVGPDAYNQKLSERRANAVKQVLTQQYGVESTRVDSVGYGETRPVADNATEEGRAVNR 333
Query: 177 RIE 179
R+E
Sbjct: 334 RVE 336
>gi|134298231|ref|YP_001111727.1| OmpA/MotB domain-containing protein [Desulfotomaculum reducens
MI-1]
gi|134050931|gb|ABO48902.1| OmpA/MotB domain protein [Desulfotomaculum reducens MI-1]
Length = 236
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 6/177 (3%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQDTGIVVSRIGD 70
SG G+ + L + L K + + T + + I +
Sbjct: 54 AALNSGAGIMESKSLSDQLIDKTEVKTDTVVELQELKKQLDQYIKENNMTTEVETNIINN 113
Query: 71 MITCYIPVH-VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KN 125
+T I + ++ + +++ + +IL ++P + + HTD+ ++
Sbjct: 114 HLTLTIRDRALFDSGSAVVKPQSRKIIKAMGSILQQYPKFEVLVAGHTDNQPIYNNTFES 173
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S +RA ++ R + G+ PI N T GR N+R+E+ I
Sbjct: 174 NWDLSSKRALNCMKIMLTNKNLDPRRLVAIGYGEYRPIAENTTTEGRAKNRRVEVII 230
>gi|170720793|ref|YP_001748481.1| OmpF family protein [Pseudomonas putida W619]
gi|169758796|gb|ACA72112.1| OmpF family protein [Pseudomonas putida W619]
Length = 345
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 65/173 (37%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + +D N ++DK D + V G +
Sbjct: 179 GSGGKVAPAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVR 232
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ ++ +A + ++P T ++ HTDS+G N +S+ RA
Sbjct: 233 VELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSERRA 292
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +K L Q+ + + G+ P+ N T+ GR N+R+E Q+ +
Sbjct: 293 NAVKEVLTQQYGVESTRVDSVGYGETRPVADNATEDGRAVNRRVEAQVEAQAK 345
>gi|260892160|ref|YP_003238257.1| OmpA/MotB domain protein [Ammonifex degensii KC4]
gi|260864301|gb|ACX51407.1| OmpA/MotB domain protein [Ammonifex degensii KC4]
Length = 268
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 64/183 (34%), Gaps = 9/183 (4%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
+SG E + + N + + E + + I +
Sbjct: 70 AVVSG--APKFEPGEDAKFALSGGGEENLQLEKIKAEIEKYAREKGLQAKITARIEERGL 127
Query: 73 TCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNL 127
+ V F L + +++ + IL K P+ + I+ HT +N
Sbjct: 128 VVSVLDTVLFPIGSAELTPQAKEVVREVGKILLKMPNC-VRIEGHTCDLPIHTPRYPSNW 186
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S RA + LI + + G+A P+ ND++ RQ N+R++ + R
Sbjct: 187 ELSVARATSVVQELIHTVNFPPQRLCACGYAEYRPLVPNDSEEHRQMNRRVDFVVL-RST 245
Query: 188 IKK 190
+K
Sbjct: 246 YQK 248
>gi|307822441|ref|ZP_07652673.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307737007|gb|EFO07852.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 363
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDS 119
G + G I + + L +L +A L +P I +Q HT S
Sbjct: 240 KGSKIDNNGCPIKLVLTGQHFKYNSAELTLNAKEILDGVAGNLVSYPQKNDIEVQGHTSS 299
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT K NL +SQ RA + YL +GV ++ +G+ PI N T+ G+ N+R+E
Sbjct: 300 EGTNKYNLKLSQRRAQSVVDYLKLKGV--TNRLTAKGYGETQPIADNSTEAGKAENRRVE 357
Query: 180 IQ 181
+
Sbjct: 358 LI 359
>gi|162449773|ref|YP_001612140.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161160355|emb|CAN91660.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 601
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 66/173 (38%), Gaps = 6/173 (3%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+G ASR + + +ED V G I
Sbjct: 422 AGSQPASRHGCPADTDGDGIPNAADACPYERGKPSEDR---ATHGCPFAVRIEGSQIVI- 477
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERA 134
+ +E + +L +A +L + P +A+ HTD+ G + NL +SQ RA
Sbjct: 478 LQQVQFRTGRAEIEPESFELLSEVAAVLEEHPEIARVAVDGHTDNQGAAQANLSLSQRRA 537
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ + + R + RGF + P+ N T+ GR N+R+E QI R +
Sbjct: 538 LAVVA-WLTAHGIDARRLEARGFGARRPLADNRTRDGRAKNRRVEFQIRKRTD 589
>gi|325286152|ref|YP_004261942.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324321606|gb|ADY29071.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 452
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 15/167 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC ++K V ++ + + +E Q +L D +
Sbjct: 300 GCPWEDKDKDGVLDKDDKCPEVAGTVANNGCPEVTEEVQKKLNDYARTI----------- 348
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + ++ + ++ I TIL ++P+ ++ HTDS+G+ N +S+ RA
Sbjct: 349 ---LFDTGKSSIKAESTAVMVDIITILKEYPNAKFTVEGHTDSVGSATLNQKLSESRALS 405
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+K +L+++ +S G+ PI TN T+ GR+ N+R+EI +
Sbjct: 406 VKEFLVEK-GIGEFRLSAVGYGEDKPIATNKTRAGRKQNRRVEINLV 451
>gi|120556561|ref|YP_960912.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
gi|120326410|gb|ABM20725.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 401
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 5/150 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+D D V D + GI + + P + ++ +
Sbjct: 253 DSDNDGVVNSQDQCPDTTAGATVDETGCEGITETVETIELRVQFPT-----NSSVIDNAY 307
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
++ +A + ++P T + I HTDS G N +SQ RA+ + L +
Sbjct: 308 DNEIRRVADFMEEYPETTVEIAGHTDSAGEAGYNQFLSQRRAEAVAGRLTGPLGVDPDRV 367
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S G+ P+ TNDT GR N+R+E +I
Sbjct: 368 SAVGYGEAEPVATNDTPAGRAQNRRVEARI 397
>gi|297537693|ref|YP_003673462.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
gi|297257040|gb|ADI28885.1| OmpA/MotB domain protein [Methylotenera sp. 301]
Length = 224
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 83/207 (40%), Gaps = 30/207 (14%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVF---------------------------LHKSND 35
K + S+ + T+ GC + +K +
Sbjct: 4 KIIVSSILVAFTLGGCANMTETQKGTAKGAGIGAGVGAVVGAIAGNTRGAVIGAAVGAAA 63
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSFV-SEVFLEKKFL 93
+ + ++ + + + TG+ V++ + + IP +SF ++ F
Sbjct: 64 GGVAGNVWTKRQEEQKRQMEEATAGTGVAVTQTADNRLKLDIPSDISFAVGRADVQPNFR 123
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+L A L P++ + I HTDS G+ N +S RA ++ YL + V+SNR I+
Sbjct: 124 AILDTFANGLVTNPNSNVTIIGHTDSTGSDAVNNPLSLNRAASVRDYLTSKRVASNR-IT 182
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ G + P+ NDT + N+R+EI
Sbjct: 183 IDGRGSREPLVANDTAANKAKNRRVEI 209
>gi|92113921|ref|YP_573849.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
gi|91797011|gb|ABE59150.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
Length = 294
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 7/144 (4%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D D+ D G V+ +G + L + +L
Sbjct: 154 DSDGDGVPDYQDQCPD------TPAGAEVNALGCAADLVLKDVNFEFDSATLTSEAENIL 207
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A L+ S + ++ +TDS+G+ N +SQ RAD +K YL+ + + I+ G
Sbjct: 208 DDVAAKLSSNESVDVRLEGYTDSVGSASYNKDLSQRRADSVKEYLVSK-GVNADSITTYG 266
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEI 180
+ + PI TN+T GR N+R+E+
Sbjct: 267 YGEQNPIATNETAEGRAENRRVEL 290
>gi|226944423|ref|YP_002799496.1| major outer membrane porin OprF [Azotobacter vinelandii DJ]
gi|226719350|gb|ACO78521.1| major outer membrane porin OprF [Azotobacter vinelandii DJ]
Length = 351
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G +++ D+ N ++D+ D + + + +++ + V
Sbjct: 185 GSGGKQQPVAEPVAEVCADVDNDGVCDNVDRCPDTPANTTVNAE-GCTAVAEVVRVELDV 243
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
F + ++++ ++ +A + ++P T ++ HTDS+GT N +S+ RA+ ++
Sbjct: 244 KFDF-DKAQVKEESYADIKNLADFMKQYPQTNTTVEGHTDSVGTDAYNQKLSERRANAVR 302
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + G+ P+ N T+ GR N+R+E ++
Sbjct: 303 DVLVNEYGVQGSRVDSVGYGESRPVADNATESGRAINRRVEAEV 346
>gi|288550313|ref|ZP_05969946.2| membrane protein OmpA-family [Enterobacter cancerogenus ATCC 35316]
gi|288315417|gb|EFC54355.1| membrane protein OmpA-family [Enterobacter cancerogenus ATCC 35316]
Length = 563
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 53/109 (48%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L+ +L + P +I + HTDS G K+N ++S +RA+ ++
Sbjct: 431 SLFDTGRWALKPGSTKLLVNSLVGIKAKPGWLIVVAGHTDSTGDDKSNQVLSLKRAESVR 490
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ G +V+G+ P+ TNDT GR N+R+EI + P+ N
Sbjct: 491 DWMRDTGDVPESCFAVQGYGESRPVATNDTPEGRALNRRVEISLVPQAN 539
>gi|258593360|emb|CBE69699.1| OmpA/MotB precursor [NC10 bacterium 'Dutch sediment']
Length = 249
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 11/166 (6%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG--DMITCY 75
C K D D+ +G+ V+R+G +
Sbjct: 90 CPNTPAGVKVDAT--GCPPDSDGDGVPDYKDQCPG------TPSGVKVNRLGCPERKAII 141
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + L + L +L +A IL+K P + I HTDS+GT N +SQ RA+
Sbjct: 142 LKGVNFAFNSAELTTESLTILDGVAEILSKHPDLKVTIAGHTDSVGTADYNKKLSQRRAE 201
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+++YL + ++ GF + PI +ND GR N+R+E+Q
Sbjct: 202 SVRNYLAS-HGVNAAKLTAVGFGEEQPIASNDEAEGRTKNRRVELQ 246
>gi|254509011|ref|ZP_05121116.1| flagellar motor protein [Vibrio parahaemolyticus 16]
gi|219548046|gb|EED25066.1| flagellar motor protein [Vibrio parahaemolyticus 16]
Length = 298
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 77/175 (44%), Gaps = 6/175 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + + +++ + ++ + + +++ I V +G I I
Sbjct: 116 STQNNQNSESDSQQQQSAEMSQELETLMESIKKALEREIEQGAIEVENLGQQIDIRIREK 175
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERA 134
+F FL+ KF P+++ IA ++ P + + HTD+ ++N +S +RA
Sbjct: 176 GAFPEGSAFLQPKFRPLVRQIADLVKDIPGI-VRVSGHTDNQRIESELYRSNWDLSAQRA 234
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + + +++ + VRG A P+ NDT+ R N+R+EI I ++
Sbjct: 235 VSVAQEMEKVRGFTSQRLRVRGMADTEPLGPNDTEAQRSRNRRVEISIMQGEALQ 289
>gi|224372468|ref|YP_002606840.1| thrombospondin type 3 repeat:OmpA/MotB [Nautilia profundicola AmH]
gi|223589113|gb|ACM92849.1| thrombospondin type 3 repeat:OmpA/MotB [Nautilia profundicola AmH]
Length = 373
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D + LDK + + G+VV G +T ++ +F+ +
Sbjct: 234 DDDQDGVPNYLDKCSNTPK------GVVVDEHGCAMTYDF-GITFDNDSADIKPQFMKKI 286
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ A L + P+ IQ +TDS G+ + N +S+ RA + LI++ S +S +G
Sbjct: 287 EEFAEFLKQNPAYKAEIQGYTDSKGSAEYNQKLSERRAKAVYEVLIKQ-GISKDRLSYKG 345
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ P+ +NDT G+ N+R+ +I
Sbjct: 346 YGEANPVASNDTPDGKAQNRRVVAKI 371
>gi|167893289|ref|ZP_02480691.1| ompA family protein [Burkholderia pseudomallei 7894]
Length = 171
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+++ Q TG V+ D + +P V+F + + F P+L +AT LN+ P
Sbjct: 31 IKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFTPLLNDLATTLNQNP 90
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
++ +TDS G+ +N +SQ RA + + + + + +S +G PI N
Sbjct: 91 QITASVVGYTDSTGSAAHNQTLSQNRAQSVVN-ALAQRGVAANRLSAQGMGASNPIADNA 149
Query: 168 TKVGRQNNQRIEIQI 182
T+ GR N+R+EI +
Sbjct: 150 TEAGRAQNRRVEIYL 164
>gi|167844755|ref|ZP_02470263.1| ompA family protein [Burkholderia pseudomallei B7210]
Length = 163
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+++ Q TG V+ D + +P V+F + + F P+L +AT LN+ P
Sbjct: 23 IKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFTPLLNDLATTLNQNP 82
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
++ +TDS G+ +N +SQ RA + + + + + +S +G PI N
Sbjct: 83 QITASVVGYTDSTGSAAHNQTLSQNRAQSVVN-ALAQRGVAANRLSAQGMGASNPIADNA 141
Query: 168 TKVGRQNNQRIEIQI 182
T+ GR N+R+EI +
Sbjct: 142 TEAGRAQNRRVEIYL 156
>gi|83648502|ref|YP_436937.1| flagellar motor protein MotB [Hahella chejuensis KCTC 2396]
gi|83636545|gb|ABC32512.1| Flagellar motor protein [Hahella chejuensis KCTC 2396]
Length = 326
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 61/147 (41%), Gaps = 6/147 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ + + ++++ + V G I + SF L +F P++ +
Sbjct: 141 EETENDAITLASALESEVRNNQVEVETRGRKIVIRVQEKGSFSSGSADLNPEFYPVIDKL 200
Query: 100 ATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+L I+++ H+DSI ++N +S RA + L + G S+
Sbjct: 201 VELLKSMEG-SISVEGHSDSIPIRTARFRSNWDLSAARALEVAHALFESGELEPSRFSIA 259
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G+A P+ ND+ R N+R+EI +
Sbjct: 260 GYADTKPLAPNDSAENRARNRRVEIIL 286
>gi|206577657|ref|YP_002237882.1| OmpA domain protein [Klebsiella pneumoniae 342]
gi|206566715|gb|ACI08491.1| OmpA domain protein [Klebsiella pneumoniae 342]
Length = 565
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 54/108 (50%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L+ +L + P +I + HTDSIG K+N +S +RA+ ++
Sbjct: 435 LFDTGKSTLKPGSTKLLVNSLLGIKAKPGWLIVVAGHTDSIGNDKSNQQLSLKRAEAVRD 494
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ G +V+G+ P+ +N+T GR N+R+EI + P+ +
Sbjct: 495 WMRDTGDVPESCFAVQGYGASRPVASNETPEGRAKNRRVEISLVPQKD 542
>gi|289661910|ref|ZP_06483491.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289667001|ref|ZP_06488076.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 172
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 19/188 (10%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L +S+ + ++GC +E + + + S L
Sbjct: 1 MNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATDTTAGSSVPTGPSTSGL---------- 50
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + + L+ +F ++ A L PS+ I +Q +T
Sbjct: 51 -----YGPGDLDTDACLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNT 105
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ + N+ + + R + + S L G S+++ ++V + + P+ T + N+R
Sbjct: 106 DERGSREYNMGLGERRGNAVSSSLQAAGGSASQ-LTVVSYGEERPVCTESGESCWSQNRR 164
Query: 178 IEIQIFPR 185
+EI +
Sbjct: 165 VEIVYTAQ 172
>gi|152970821|ref|YP_001335930.1| hypothetical protein KPN_02274 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150955670|gb|ABR77700.1| putative exported protein [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
Length = 565
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 54/108 (50%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L+ +L + P +I + HTDSIG ++N +S +RA+ ++
Sbjct: 435 LFDTGKSTLKPGSTKLLVNSLLGIKAKPGWLIVVAGHTDSIGNDRSNQQLSLKRAEAVRD 494
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ G +V+G+ P+ +N+T GR N+R+EI + P+ +
Sbjct: 495 WMRDTGDVPESCFAVQGYGASRPVASNETPEGRAQNRRVEISLVPQKD 542
>gi|315644424|ref|ZP_07897557.1| OmpA/MotB domain protein [Paenibacillus vortex V453]
gi|315280174|gb|EFU43467.1| OmpA/MotB domain protein [Paenibacillus vortex V453]
Length = 273
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 67/174 (38%), Gaps = 9/174 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD----MITCYI 76
+ + ++ L+K + + +++ G+ + I
Sbjct: 83 KASSPNVPATTPDQRRAELMRQEQEDLEKLKKQLDNYIKNNGLTSELSTKLNHSQLVITI 142
Query: 77 PVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQ 131
+ F E ++ + + + I+ +L+KFP I + HTD++ +N +S
Sbjct: 143 RDNALFPSGEAVVKPEARKLAKAISQMLHKFPDYEIIVSGHTDNVPIANSRYPSNWDLSS 202
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+RA L+ + G+ +PI N T+ GR N+R+E+ I +
Sbjct: 203 DRALQFMKILLTNSALDPKRFMPIGYGEYHPIADNKTEAGRAKNRRVEVSIIRK 256
>gi|94500546|ref|ZP_01307077.1| flagellar motor protein [Oceanobacter sp. RED65]
gi|94427336|gb|EAT12315.1| flagellar motor protein [Oceanobacter sp. RED65]
Length = 331
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 11/179 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
G ++ +++ + K +++ + E + ++ + + G I I
Sbjct: 122 GNTGKQTREITVPKESESQKKQAEQAEETAFELATELEREISKGQVELETQGSKIVIRIR 181
Query: 78 VHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI-----GTLKNNLLISQ 131
SF ++E +FLP+L I +L + P I+++ HTDS G +N +S
Sbjct: 182 EKGSFNAGGAYVEDEFLPVLDTIREVLVEVPG-RISVEGHTDSTPLGRGGRYNSNWELSA 240
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF---PRGN 187
RA + YL V G P+ N T GR N+R+EI + P+ N
Sbjct: 241 ARAAAVAEYLFIAPEMPESRFRVVGHGSVRPVAENKTAEGRAKNRRVEIIVLRSKPQDN 299
>gi|84394351|ref|ZP_00993072.1| flagellar motor protein [Vibrio splendidus 12B01]
gi|84375010|gb|EAP91936.1| flagellar motor protein [Vibrio splendidus 12B01]
Length = 315
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNK 105
++ + + ++ I V +G I I +F FL+ KF P+++ +A ++
Sbjct: 160 MESIKKALEREIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKD 219
Query: 106 FPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P + I HTD+ ++N +S +RA + + + S++ + VRG A
Sbjct: 220 VPGI-VRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTE 278
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
P++ NDT+ R N+R+EI I
Sbjct: 279 PVEPNDTEWQRSLNRRVEISIM 300
>gi|261403961|ref|YP_003240202.1| OmpA/MotB domain-containing protein [Paenibacillus sp. Y412MC10]
gi|329930219|ref|ZP_08283832.1| chemotaxis protein MotB [Paenibacillus sp. HGF5]
gi|261280424|gb|ACX62395.1| OmpA/MotB domain protein [Paenibacillus sp. Y412MC10]
gi|328935241|gb|EGG31722.1| chemotaxis protein MotB [Paenibacillus sp. HGF5]
Length = 268
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 68/174 (39%), Gaps = 9/174 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD----MITCYI 76
+ + ++ L+K + + +++ G+ + I
Sbjct: 83 KATTPSVPATTPDQRRAELMRQEQEDLEKLKKQLDNYIKNNGLTSELSTKLNHSQLVITI 142
Query: 77 PVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQ 131
+ F E ++ + + + I+ +L+KFP I + HTD++ +N +S
Sbjct: 143 RDNALFPSGEAVVKPEARKLAKAISQMLHKFPDYEIIVSGHTDNVPISNSKYPSNWDLSS 202
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+RA L+ + G+ +PI N+T VGR N+R+E+ I +
Sbjct: 203 DRALQFMKILLTNSELDPKRFMPIGYGEYHPIADNNTAVGRAKNRRVEVSIIRK 256
>gi|166712982|ref|ZP_02244189.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 172
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 70/181 (38%), Gaps = 16/181 (8%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L +S+ + ++GC +E + + + + S L
Sbjct: 8 LLVSLLSVAVLAGCSKKVKETPPPATNTTAVSSVPTGPSTSGL---------------YG 52
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ V + + L+ +F ++ A L PS+ I +Q + D G+ +
Sbjct: 53 PGDLDTDACLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADERGSRE 112
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ + + R + + S L G S+++ ++V + + P+ T + N+R+EI
Sbjct: 113 YNMGLGERRGNAVSSSLQAAGGSASQ-LTVVSYGEERPVCTESNESCWSQNRRVEIVYTA 171
Query: 185 R 185
+
Sbjct: 172 Q 172
>gi|117918835|ref|YP_868027.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117611167|gb|ABK46621.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 202
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 74/183 (40%), Gaps = 5/183 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + ++GC + R+ + + ++ + G + +A + + G
Sbjct: 2 KTVILFMSVALLAGCSM--RDTVNIEEMTTTQAYDLSDKDGDGVIEARERCNDTAKGAGT 59
Query: 64 VVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G + + ++ ++ P ++ IA L ++P+T + I+ HT
Sbjct: 60 DNYGCGQIKAINERKEINVLFPNDSAYIAPEYYPQIEEIAMFLRQYPTTKVTIEGHTSRT 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N ++SQERAD + + L R ++ G+ P+ T N+R+
Sbjct: 120 GTDERNAVLSQERADAVTAVLADRFSIDRSRLTAIGYGSSRPLVLEHTPDAETRNRRVVA 179
Query: 181 QIF 183
++
Sbjct: 180 EVT 182
>gi|299140724|ref|ZP_07033862.1| lipoprotein PG3 [Prevotella oris C735]
gi|298577690|gb|EFI49558.1| lipoprotein PG3 [Prevotella oris C735]
Length = 225
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 79/210 (37%), Gaps = 31/210 (14%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG----------------- 44
+K L ++ + +S C +++ + L + ++ G
Sbjct: 1 MKNLKMATVGLCVLSVCSCSTK-QGTGTLIGAGGGSVLGAIVGKIAGNTAVGAAIGGAVG 59
Query: 45 --------SSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSFVSE-VFLEKKF 92
+DK + Q+++ + + + + F + L
Sbjct: 60 AGAGALIGRHMDKVAAQ-AAQIRNAKVEEVTDANGLKAVKVTFDSGILFATNQATLTSSS 118
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L + +L + I HTD+ G N+ +S RA+ + +YL Q GVS ++F
Sbjct: 119 KNDLAKFSKVLKDNSDCHVDIYGHTDTTGNDGINIPLSNRRAESVVNYLKQCGVSGSQFQ 178
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+V G P+ N T GR+ N+R+E+ +
Sbjct: 179 NVVGKGSAEPVADNSTAAGRKQNRRVEVYL 208
>gi|146281895|ref|YP_001172048.1| outer membrane protein [Pseudomonas stutzeri A1501]
gi|145570100|gb|ABP79206.1| outer membrane protein [Pseudomonas stutzeri A1501]
Length = 212
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 68/203 (33%), Gaps = 26/203 (12%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG----------------------- 44
+ + T ++GC ++ T
Sbjct: 10 VIVMTTFLAGCAGVQKQDWPTCAAVGGVTGAALGAIESSTYAGWGALIGGGVAAAYCWAN 69
Query: 45 --SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
A E + T + + V F +++ +Q +A
Sbjct: 70 GMEEETVAVVETVEPMPQTQPEPEPAAAPVRVELDVKFDF-DRDVVKQDSYSDIQNLADF 128
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ ++ T ++ HTDS+GT N +S+ RA+ ++ L+ ++ G+ P
Sbjct: 129 MKEYRQTTTVLEGHTDSVGTDAYNQRLSERRANAVRRVLVDELGVEGNRVNAVGYGESRP 188
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
+ N T+ GR N+R+E ++ R
Sbjct: 189 VADNSTEEGRAINRRVEAEVEAR 211
>gi|124003367|ref|ZP_01688217.1| outer membrane protein [Microscilla marina ATCC 23134]
gi|123991465|gb|EAY30896.1| outer membrane protein [Microscilla marina ATCC 23134]
Length = 116
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ L+ K L + L + P I HTD+IG N +SQ+
Sbjct: 2 VFTLNNVFFEYNKYALKDKSKVELDNLVKFLKENPEISGEISGHTDNIGDKARNRELSQQ 61
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ ++ YL+ GV ++R + +G+ P TNDT+ GR N+RIE +I
Sbjct: 62 RANSVRDYLVSHGVDASRLVY-KGYGDSKPAATNDTEEGRAKNRRIEFKIL 111
>gi|95928801|ref|ZP_01311547.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
gi|95135146|gb|EAT16799.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
Length = 415
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G V G + + + ++ + + + + A +NK+P I I HTDS
Sbjct: 292 AGAHVDEYGCQLVLTLLIE-FDTNKADIRPQHIQDMTNAAAFINKYPGEKILISGHTDSD 350
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ N +SQ RAD +K+YLIQ ++ +GF PI N T G+Q N+R+E+
Sbjct: 351 GSEAYNQQLSQRRADAVKAYLIQNYAIDGTNLTAKGFGESQPIADNTTAAGKQKNRRVEL 410
Query: 181 QIFPR 185
+F
Sbjct: 411 SLFNN 415
>gi|50085693|ref|YP_047203.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp.
ADP1]
gi|49531669|emb|CAG69381.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp.
ADP1]
Length = 193
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 5/180 (2%)
Query: 2 IKELGLSMFI-MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K L + ++GC K + +N L + L
Sbjct: 8 MKLFVLPVLATALVMTGCAS---RKPAAPVSAANTPSTATTVSTEGLSEDAALNAKNLTG 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V L + LQ A L ++ +A+ HTD
Sbjct: 65 ASAKGVTAANRAFLAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDER 124
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA ++SYLI + + + + + PI+ + + N+R+EI
Sbjct: 125 GTREYNMALGERRAKAVQSYLITN-GVNPQQLEAVSYGKEMPINPGHNEAAWKENRRVEI 183
>gi|56477938|ref|YP_159527.1| outer membrane lipoprotein [Aromatoleum aromaticum EbN1]
gi|56313981|emb|CAI08626.1| outer membrane lipoprotein containing OmpA/MotB domain [Aromatoleum
aromaticum EbN1]
Length = 189
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 74/184 (40%), Gaps = 4/184 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L + + + T +S C + + T V K + +L +
Sbjct: 5 SLFVLVGVSTLLSACATTTVTSPPGTATPIHRTVPVAKNTAFDWPAERNRIVKRLSGSSE 64
Query: 64 VVSRIGDMITCYI---PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ +R+ D T + + P L +A+ L P I + HTDS+
Sbjct: 65 IATRVLDNGTLQLLLPGAEAFSRGGTEPQPVLTPNLDRVASALASSPEVEIRVFGHTDSL 124
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ +NL +S +RA+ + +L +RG+ R + G PI N T+ GR N+R+EI
Sbjct: 125 DSELHNLQLSIQRAETVAEHLRRRGIPLVR-LHADGKGEAEPIADNATEAGRAKNRRVEI 183
Query: 181 QIFP 184
+ P
Sbjct: 184 VLRP 187
>gi|317502696|ref|ZP_07960808.1| immunogenic lipoprotein PG3 [Prevotella salivae DSM 15606]
gi|315666182|gb|EFV05737.1| immunogenic lipoprotein PG3 [Prevotella salivae DSM 15606]
Length = 225
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 79/210 (37%), Gaps = 31/210 (14%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG----------------- 44
+K L ++ + +S C A++ + L + ++ G
Sbjct: 1 MKNLKMATMGLCVLSVCSCATK-QGTGTLIGAGGGSVLGAIVGKIAGNTAVGAAIGGAVG 59
Query: 45 --------SSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSFVSE-VFLEKKF 92
+DK + Q+++ + + + + F + L
Sbjct: 60 AGAGALIGRHMDKVAAQ-AAQIRNAKVEEVTDANGLKAVKVTFDSGILFATNQATLTASS 118
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L + +L + I HTD+ G N+ +S RA+ + +YL GVSS++F
Sbjct: 119 KNDLVKFSKVLKDNSDCHVDIYGHTDNTGNDAINIPLSNRRAESVVNYLKSCGVSSSQFQ 178
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+V G P+ N T GR+ N+R+E+ +
Sbjct: 179 NVVGKGSSEPVADNSTAAGRKQNRRVEVYL 208
>gi|157370029|ref|YP_001478018.1| OmpA/MotB domain-containing protein [Serratia proteamaculans 568]
gi|157321793|gb|ABV40890.1| OmpA/MotB domain protein [Serratia proteamaculans 568]
Length = 569
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 53/117 (45%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I + + + L+ ML + P +I + HTD+ G N +S
Sbjct: 429 KIVRLDSMSLFDSGKYALKAGSTKMLINSLVGIKAKPGWLIVVAGHTDNTGNPALNQTLS 488
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
Q+RA ++ ++ G +V+G+ P+ TNDT GR N+R+EI + P+ +
Sbjct: 489 QKRAAAVRDWMRDTGDVPESCFAVQGYGESRPVATNDTPEGRALNRRVEISLVPQAD 545
>gi|327480660|gb|AEA83970.1| outer membrane protein OprF precursor [Pseudomonas stutzeri DSM
4166]
Length = 299
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+++ + V F + + ++ ++ +A + ++P T ++ HTDS+GT
Sbjct: 177 EPEPAPEVVRVELDVKFDF-DKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSVGTD 235
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ N +S+ RA+ +++ L+ ++ G+ P+ N T+ GRQ N+R+E ++
Sbjct: 236 QYNQRLSERRAEAVRNVLVNEYGVQGNRVNSVGYGESRPVADNSTEEGRQINRRVEAEV 294
>gi|221635437|ref|YP_002523313.1| chemotaxis protein MotB (Motility protein B) [Thermomicrobium
roseum DSM 5159]
gi|221157647|gb|ACM06765.1| chemotaxis protein MotB (Motility protein B) [Thermomicrobium
roseum DSM 5159]
Length = 237
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L G V + I ++ + F + L + +L IA I+ P+ I ++ H
Sbjct: 101 LDRQGAEVELTSEGIVIHLSDAILFPPGQAELRPEAQRVLDGIAAIIEPLPN-PIRVEGH 159
Query: 117 TDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TDS G+ +N +S RA YL + +S G+ P +N+T GR
Sbjct: 160 TDSTPPPPGSYPDNWELSAMRAVNTVRYLTDVAGLPPQRLSAAGYGEFRPRASNETVEGR 219
Query: 173 QNNQRIEIQIF 183
+ N+R++I I
Sbjct: 220 RKNRRVDIVIV 230
>gi|213054486|gb|ACJ39422.1| PomB2 [Aeromonas hydrophila]
Length = 297
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 6/172 (3%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G E K V + ++ + ++ + Q+QD I V +G I I
Sbjct: 111 AGGHDKSEDKLVGGDTRQEAQKKQEQSNDLAKELAEQMKAQIQDGAIEVEALGQQIIIRI 170
Query: 77 PVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQ 131
+F FL+ +F P+++ +AT+L P I I HTD + T ++N +S
Sbjct: 171 REKAAFPAGSAFLQPQFWPVVRKVATLLKDVPG-EITISGHTDDVATEDELFQSNWELSS 229
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA + +I+ + V+G A P+ N T R+ N+R+EI I
Sbjct: 230 QRAVAVAHQMIKVPGFDGGRLVVQGMADSQPLVPNTTPENRRMNRRVEISIM 281
>gi|168334555|ref|ZP_02692711.1| flagellar motor protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 251
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 10/173 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G E+ + I + LDK + + D + V + G+ +
Sbjct: 76 GVENVPEEEDRKAAENIKQITIEMENIKEELDKF---LKSEGLDNKVTVEQDGEEVVLTF 132
Query: 77 PVHVSFVSE-VFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLK----NNLLI 129
+ F S ++ L +L I + ++ + + HTD++ +N +
Sbjct: 133 EDFMLFDSGLAVIKPDGLEVLGKIGNEIKQYLEDDYIARAEGHTDNLPINSLIFPSNWEL 192
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S RA + YLI S IS GF YPI TNDT GR N+R+EI+I
Sbjct: 193 SASRAISVAKYLINDIGISPMRISAEGFGEFYPIATNDTPEGRAQNRRVEIKI 245
>gi|148976605|ref|ZP_01813292.1| flagellar motor protein MotB [Vibrionales bacterium SWAT-3]
gi|145963956|gb|EDK29214.1| flagellar motor protein MotB [Vibrionales bacterium SWAT-3]
Length = 315
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNK 105
++ + + ++ I V +G I I +F FL+ KF P+++ +A ++
Sbjct: 160 MESIKKALEREIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKD 219
Query: 106 FPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P + I HTD+ ++N +S +RA + + + S++ + VRG A
Sbjct: 220 VPGI-VRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTE 278
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
P++ NDT+ R N+R+EI I
Sbjct: 279 PVEPNDTEWQRSLNRRVEISIM 300
>gi|91202869|emb|CAJ72508.1| similar to flagellar motor protein MotB [Candidatus Kuenenia
stuttgartiensis]
Length = 223
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 78/205 (38%), Gaps = 27/205 (13%)
Query: 3 KELGLSMFIMTTISGCGLASR----EKKKVFLHKSNDTDIVN------------KRFGSS 46
K L++F+ ++GC +++ + +I K
Sbjct: 9 KFFLLAVFVG--MTGCAELDELRVLNRRQAITIRDQSDEIARYRNQLTSMSEKIKASEEE 66
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNK 105
++K + + G+ V + P + F S ++ L+ +A L +
Sbjct: 67 MEKLR-KLAESI-GGGVSVRDTFEGPVILFPEMILFDSGMATIKAHGEDALRKMARFLEE 124
Query: 106 FPSTVIAIQSHTDSIGT------LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
P++ + I HTDS +N +S RA + +L ++G + I + GF
Sbjct: 125 NPASSLRIDGHTDSDPIIKTKHLWDSNHHLSAARALSVFHFLTKKGNIPEQRIHIAGFGP 184
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFP 184
PI N T G++ N+R+E I P
Sbjct: 185 NRPIAPNTTPAGKKENRRVEFLILP 209
>gi|220934517|ref|YP_002513416.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219995827|gb|ACL72429.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 305
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 7/164 (4%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSE 85
+ +++ + D+ E + I + R I I + F
Sbjct: 112 RDAELDADELQAAAEGMSRLADEIERAMLPLMDADLIRMRRDRFWIEVEINTSLLFASGS 171
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYL 141
L + +P+LQ +ATIL FP I ++ TD++ N +S RA + +
Sbjct: 172 AQLSSEAVPVLQRLATILRDFP-ARIQVEGFTDTVPINTPIFPSNWELSAARAASVVNLF 230
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + R + G+ PI NDT GR+ N+R+ I +
Sbjct: 231 SRNQLDPTRM-AAIGYGEYRPIADNDTAEGRRQNRRVSIVVLAE 273
>gi|189464066|ref|ZP_03012851.1| hypothetical protein BACINT_00401 [Bacteroides intestinalis DSM
17393]
gi|198275155|ref|ZP_03207686.1| hypothetical protein BACPLE_01313 [Bacteroides plebeius DSM 17135]
gi|298482396|ref|ZP_07000582.1| outer membrane protein [Bacteroides sp. D22]
gi|189438400|gb|EDV07385.1| hypothetical protein BACINT_00401 [Bacteroides intestinalis DSM
17393]
gi|198271975|gb|EDY96245.1| hypothetical protein BACPLE_01313 [Bacteroides plebeius DSM 17135]
gi|298271375|gb|EFI12950.1| outer membrane protein [Bacteroides sp. D22]
Length = 213
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 83/211 (39%), Gaps = 28/211 (13%)
Query: 1 MIKELG-LSMFIMTTISGCGLA-----------SREKKKVFLHKSNDTDIVNKRFGSSLD 48
M K++ L+ F++T + C +EK + + + T + +
Sbjct: 1 MKKKIIILAAFVVTFFTACTSTHMITFSNAELSDKEKDMIENNSNYSTASIVGGSAKLVK 60
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCY---------------IPVHVSFVSEVFLEKKFL 93
+ D+ + + + D ++ + L ++
Sbjct: 61 EERDKAIQEKIEARRNKLKAIDGLSISSYKDKNGKEQFKATAQSEILFKFDSYELNEEAQ 120
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
ML + I+++ P+T I I HTD+IG + N+++S+ RA + +YL I+
Sbjct: 121 KMLSDLCNIISEIPNTKIKIIGHTDNIGEKQYNIILSKNRAAAVGNYLRTA-GIETNNIT 179
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G Y PI N ++ GR N+R+EI I
Sbjct: 180 EDGKGYSEPIADNTSEAGRAKNRRVEIFITN 210
>gi|5081414|gb|AAD39369.1|AF117974_1 outer membrane protein OprF [Pseudomonas sp. DC]
Length = 343
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 4/172 (2%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCY 75
G G E V + +D N ++DK + + + G +
Sbjct: 175 GGGSKKVEAAPVEAAPAVCSDSDNDGVCDNVDKCPNTPANVTVDANGCPAVAEVVRVQL- 233
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ ++ ++ +A + ++P T ++ HTDS+G N +S+ RA+
Sbjct: 234 --DVKFDFDKSVVKPNSYRDIKNLADFMKQYPQTTTTVEGHTDSVGPDAYNQKLSERRAN 291
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+K L+ + +S G+ P+ N T GR N+R+E ++ +
Sbjct: 292 AVKQVLVNQYGVGANRVSSVGYGETRPVADNATDAGRAVNRRVEAEVEAQAK 343
>gi|218133672|ref|ZP_03462476.1| hypothetical protein BACPEC_01541 [Bacteroides pectinophilus ATCC
43243]
gi|217991047|gb|EEC57053.1| hypothetical protein BACPEC_01541 [Bacteroides pectinophilus ATCC
43243]
Length = 266
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 66/164 (40%), Gaps = 5/164 (3%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
++++ + + + E + + + + V + + + F
Sbjct: 98 TQEEIKDAAQQIQEAGLQESEHMAENIEKQLEQNMLSDDVEVKATSKYVMLNLNSGILFD 157
Query: 84 -SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI----SQERADVIK 138
+ L+ + + +L +++IL ++ +IAI+ HTD+ + S RA +
Sbjct: 158 SGKSELKTEAVTLLDKVSSILWEYNDNMIAIEGHTDNNPIHNSKYPDNTMLSLYRAYSVF 217
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+YL + + G PI +N T GR N+R+EI+I
Sbjct: 218 TYLTDQKGFDASTMLATGRGESVPIASNATAEGRAQNRRVEIKI 261
>gi|116620394|ref|YP_822550.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223556|gb|ABJ82265.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 545
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
++ + + + + QL + + + I + ++ L+
Sbjct: 384 AKQGMQKAEAEKAELRERLRNQL-NMILETRETARGLIINISDVLFDFNKYTLKPGAREK 442
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L ++ IL +P I ++ HTDSIG+ + N +S+ RA ++ YL + V ++ +S
Sbjct: 443 LAKVSGILLAYPGLNIKVEGHTDSIGSDEYNQKLSESRASSVRDYLTSQNVPADS-VSAV 501
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ +NDT GRQ N+R+E+ +
Sbjct: 502 GLGKSDPVASNDTAAGRQRNRRVELVV 528
>gi|281425749|ref|ZP_06256662.1| lipoprotein PG3 [Prevotella oris F0302]
gi|281400157|gb|EFB30988.1| lipoprotein PG3 [Prevotella oris F0302]
Length = 225
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 79/210 (37%), Gaps = 31/210 (14%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG----------------- 44
+K L ++ + +S C +++ + L + ++ G
Sbjct: 1 MKNLKMATVGLCVLSVCSCSTK-QGTGTLIGAGGGSVLGAIVGKIAGNTAVGAAIGGAVG 59
Query: 45 --------SSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSFVSE-VFLEKKF 92
+DK + Q+++ + + + + F + L
Sbjct: 60 AGAGALIGRHMDKVAAQ-AAQIRNAKVEEVTDANGLKAVKVTFDSGILFATNQATLTSSS 118
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L + +L + I HTD+ G N+ +S RA+ + +YL Q GVS ++F
Sbjct: 119 KNDLAKFSKVLKDNSDCHVDIYGHTDTTGNDGINIPLSNRRAESVVNYLKQCGVSGSQFK 178
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+V G P+ N T GR+ N+R+E+ +
Sbjct: 179 NVVGKGSAEPVADNSTAAGRKQNRRVEVYL 208
>gi|238895326|ref|YP_002920061.1| hypothetical protein KP1_3385 [Klebsiella pneumoniae NTUH-K2044]
gi|238547643|dbj|BAH63994.1| hypothetical protein KP1_3385 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 565
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 54/108 (50%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L+ +L + P +I + HTDSIG ++N +S +RA+ ++
Sbjct: 435 LFDTGKSALKPGSTKLLVNSLLGIKAKPGWLIVVAGHTDSIGNDRSNQQLSLKRAEAVRD 494
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ G +V+G+ P+ +N+T GR N+R+EI + P+ +
Sbjct: 495 WMRDTGDVPESCFAVQGYGASRPVASNETPEGRAQNRRVEISLVPQKD 542
>gi|120554618|ref|YP_958969.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
gi|120324467|gb|ABM18782.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 189
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 57/181 (31%), Gaps = 4/181 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVF--LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ + ++GC ++ + D + D
Sbjct: 8 KAFAMLLSAGLVAGCSSTGENMEEGAYGSDVAAIDQDGGSTVYGGADGSGVSASELTDDE 67
Query: 62 GIVVSRIGDMITCY-IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ I ++ +L A L P + ++ H D
Sbjct: 68 RRAAQEQAEQEALRDITTFYFDFDTSEIKPDARDVLVAHARYLADNPRQQVRLEGHADER 127
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + NL + + RA+ ++ +LI G S + +V + + P T+ N+R+E+
Sbjct: 128 GTKEYNLALGERRANAVQRFLIVNGASRGQIETVS-YGEEKPAVRGSTESAWAQNRRVEL 186
Query: 181 Q 181
Sbjct: 187 V 187
>gi|60650175|ref|YP_209728.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
gi|255010962|ref|ZP_05283088.1| putative outer membrane protein [Bacteroides fragilis 3_1_12]
gi|313148766|ref|ZP_07810959.1| lipoprotein [Bacteroides fragilis 3_1_12]
gi|317477470|ref|ZP_07936697.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
gi|60495255|emb|CAH05749.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
gi|313137533|gb|EFR54893.1| lipoprotein [Bacteroides fragilis 3_1_12]
gi|316906390|gb|EFV28117.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
Length = 213
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 82/211 (38%), Gaps = 28/211 (13%)
Query: 1 MIKELG-LSMFIMTTISGCGLA-----------SREKKKVFLHKSNDTDIVNKRFGSSLD 48
M K++ L+ F++T + C +EK + + + T + +
Sbjct: 1 MKKKIIILAAFVVTFFTACTSTHMITFSNAELSDKEKDMIENNSNYSTASIVGGSAKLVK 60
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCY---------------IPVHVSFVSEVFLEKKFL 93
+ D+ + + + D ++ + L ++
Sbjct: 61 EERDKAIQEKIEARRNKLKAIDGLSISSYKDKNGKEQFKATAQSEILFKFDSYELNEEAQ 120
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
ML + I+ + P+T I I HTD+IG + N+++S+ RA + +YL I+
Sbjct: 121 KMLSDLCNIITEIPNTKIKIIGHTDNIGEKQYNIILSKNRAAAVGNYLRTA-GIETNNIT 179
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G Y PI N ++ GR N+R+EI I
Sbjct: 180 EDGKGYSEPIADNTSEAGRAKNRRVEIFITN 210
>gi|323706054|ref|ZP_08117624.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534668|gb|EGB24449.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 241
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 55/168 (32%), Gaps = 6/168 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ L T S + + + + + +
Sbjct: 65 GQQSGNSILDSIKTTGTNGTNDNSIASQLDKLIKQYNLQNMVTYKVDERGFVISLNDTLL 124
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADV 136
F ++ L I IL P+ I ++ +TD++ +N +S RA
Sbjct: 125 FDTGSADVKPDQKETLIKIGNILKSMPNY-IRVEGYTDNVPINNNQFHSNWELSVIRATN 183
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ L+ IS G+ PI ND+ RQ N+R++I I
Sbjct: 184 VVEILVNDVKMDPAKISAVGYGEYRPIVPNDSDKNRQLNRRVDIVIMN 231
>gi|163755660|ref|ZP_02162779.1| OmpA/MotB [Kordia algicida OT-1]
gi|161324573|gb|EDP95903.1| OmpA/MotB [Kordia algicida OT-1]
Length = 635
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 57/166 (34%), Gaps = 15/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + +K +V G + E V I D
Sbjct: 480 GCPDTDGDGFPD--NKDKCPTVVGTIEGCPAEVVET-----------EVVTIPDP-AVGE 525
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+K +L IA L I+I H DS GT + N +S ERA
Sbjct: 526 RKVYFDFDSSKLDKNAKEILDNIAANLKNDAGYNISIIGHADSRGTDRYNDKLSIERAQ- 584
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + SN I++ G PI N T GR N+R+E+ I
Sbjct: 585 VIKNYLDSKKLSNSNITITGKGESAPIAPNTTPEGRAKNRRVELII 630
>gi|163757275|ref|ZP_02164371.1| OmpA/MotB [Kordia algicida OT-1]
gi|161322760|gb|EDP94113.1| OmpA/MotB [Kordia algicida OT-1]
Length = 617
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 63/166 (37%), Gaps = 15/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + +K +V G + E V I D
Sbjct: 462 GCPDTDGDGFPD--NKDKCPTVVGTIEGCPAEVVET-----------EVVTIPDP-AVGE 507
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L++ +L IA L I+I H DS GT + N +S ERA
Sbjct: 508 RKVYFDFDSSKLDQNAKEILDNIAANLKNDAGYNISIIGHADSRGTDRYNDKLSVERAQA 567
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
IK+YL + +S++ I++ G PI N T GR N+R+E+ I
Sbjct: 568 IKNYLDSKKLSNSN-ITITGKGESAPIAPNTTPEGRAKNRRVELII 612
>gi|78485827|ref|YP_391752.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78364113|gb|ABB42078.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2]
Length = 187
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 75/181 (41%), Gaps = 3/181 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L L F+ T+ GC ++ + T + SS + +
Sbjct: 6 LKQLFLVGFLGLTLVGCSSTPTTEEGDTGSTTEQTSASAETETSSATDSNAGSGADMAAA 65
Query: 62 GIVVSRIGDMITCYIPVHV--SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + + + V ++ +F ++++ A + S ++ ++ + D
Sbjct: 66 TNAAGQTAEDLYAALQGKVVNFEFDRSEVQSQFYDVIKMNADYMALNDSAMVTVKGYCDE 125
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + + RA+ +K+ L+ GVS +R I+V F + P+D + N+R E
Sbjct: 126 RGTREYNLALGERRANAVKNALVAEGVSPSR-INVISFGEENPVDPAHNEAAWAKNRRAE 184
Query: 180 I 180
Sbjct: 185 F 185
>gi|332528331|ref|ZP_08404331.1| OmpA/MotB [Hylemonella gracilis ATCC 19624]
gi|332042202|gb|EGI78528.1| OmpA/MotB [Hylemonella gracilis ATCC 19624]
Length = 186
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 69/182 (37%), Gaps = 5/182 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKV---FLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K LG+++F T++ C + + + + S+ + + +
Sbjct: 4 LKYLGIALFS-LTLAACSSVKLDPQTGSDKASAGQTSATVADGGAVGSVPQPTATPETVV 62
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q G + + + ++ +F +++ A L+ P+ + I+ HTD
Sbjct: 63 QSAGPTAASLQSAAMAAGRLVYFDYDSYVIKPEFQKLIEAQARYLSSDPALRVVIEGHTD 122
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G + NL + Q RA+ ++ + ++ I F + P+ + N+R
Sbjct: 123 ERGGREYNLALGQRRAEAVRR-ALSLLGVADTQIDAVSFGEEKPVSEGSNESAWSQNRRA 181
Query: 179 EI 180
EI
Sbjct: 182 EI 183
>gi|330951777|gb|EGH52037.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Pseudomonas syringae Cit 7]
Length = 344
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + +D N ++DK D + V G +
Sbjct: 178 GGSKKVEAAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVR 231
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ ++ +A + ++P T ++ HTDS+G N +S+ RA
Sbjct: 232 VELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTTTVEGHTDSVGPDAYNQKLSERRA 291
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +K L+ + ++ G+ P+ N T+ GR N+R+E ++ +
Sbjct: 292 NAVKQVLVNQYGVGANRVNSVGYGESRPVADNATEAGRAVNRRVEAEVEAQAK 344
>gi|311694925|gb|ADP97798.1| peptidoglycan-associated lipoprotein [marine bacterium HP15]
Length = 190
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 64/182 (35%), Gaps = 5/182 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHK---SNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ + + ++GC ++ + + D+ ++
Sbjct: 8 KAFALLLSVGLVAGCSSTGGTSEEGGEYGSDVAAVDQEGGSTVYGGDDQGGVSSSAMTEE 67
Query: 61 TGIVVSRIGDMITCY-IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + + I ++++ +L A L P + I+ H D
Sbjct: 68 ERMEARKQAEQQALREITTFYFDFDTAEIKQEARDVLVAHARFLANNPGQNVRIEGHADE 127
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + + RA+ ++ +LI G S + +V + + P ++ N+R+E
Sbjct: 128 RGTKEYNLALGERRANAVQRFLIVNGASRGQLETVS-YGEEKPAVMGSSESAWAQNRRVE 186
Query: 180 IQ 181
+
Sbjct: 187 LV 188
>gi|126734944|ref|ZP_01750690.1| OmpA family domain protein [Roseobacter sp. CCS2]
gi|126715499|gb|EBA12364.1| OmpA family domain protein [Roseobacter sp. CCS2]
Length = 220
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ RE+ + L + V G+SLD+ ++ + QL++ + VS G + + +
Sbjct: 57 SVRERNQAALIGAALGAGVGAGVGNSLDRQAEDLRRQLRND-VGVSNNGRDLRVVLSEDL 115
Query: 81 SFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
F + L L+++A L ++P + + + HTD++G N +S+ RA + S
Sbjct: 116 LFATNSTQLSGTAQRELRIVANSLQQYPDSTVNVIGHTDNVGEASFNQGLSERRASAVSS 175
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L+ GVS NR I G P+ +N GRQ N+R+EI I P
Sbjct: 176 VLVGGGVSRNR-IRTIGAGENNPVASNLNAAGRQANRRVEIVITPN 220
>gi|83643665|ref|YP_432100.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83631708|gb|ABC27675.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 494
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 66/173 (38%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+ +++ + L KR + + + Q T V R +
Sbjct: 321 AASLETMKQEMEQKLLAVQLETDAVKRANEEIQRRFEFVQELFTLTEADVYRQNANVLIR 380
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+++ + +L I + FP+ I I HTD+ G N +S++RA
Sbjct: 381 AHGFKFASGSSEVQRDNVTLLNKIIDAIEAFPNCKIRISGHTDNRGDRALNQSLSEKRAS 440
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ +L G + I GF P+ NDTK GR N+R+E+ I N+
Sbjct: 441 NVAKFLANVGSIDSSRIEAEGFGASRPVANNDTKEGRAANRRVEVLIINDANL 493
>gi|229543005|ref|ZP_04432065.1| OmpA/MotB domain protein [Bacillus coagulans 36D1]
gi|229327425|gb|EEN93100.1| OmpA/MotB domain protein [Bacillus coagulans 36D1]
Length = 274
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 76/178 (42%), Gaps = 9/178 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITC 74
+ + ++ TD N + + L + + + + S G+ +
Sbjct: 92 AQKNGDSTTNGSKSNSTTDASNGQGDAQLKETQQRINTYIAHNKLEGKFETSLTGEGLLI 151
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLI 129
I +V F + + K+ + + ++ +L P I + HTD++ ++N +
Sbjct: 152 TIRDNVLFDSGKAEVRKEDIKTAKALSNLLVMDPPRSIIVSGHTDNVPIHNSVFQSNWDL 211
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
S RA +++ + ++ S +G+ +PI +NDT+ GR N+R+E+ I P+
Sbjct: 212 SVMRATNFLKIILENKNLNPKYFSAKGYGEYHPIASNDTQGGRAKNRRVEVLILPKNE 269
>gi|121533592|ref|ZP_01665419.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
gi|121307583|gb|EAX48498.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
Length = 257
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 37/222 (16%), Positives = 80/222 (36%), Gaps = 41/222 (18%)
Query: 1 MIKELG-----LSMFIMTTISGCGLASREKKK----------VFLHKSNDTDIV------ 39
M++ L +++ ++ + ++S ++KK + T+++
Sbjct: 19 MMRWLLTYADLITLLMVFFVVMYAMSSADQKKFNALKASLAAALRTEGAGTNLIFEYSGN 78
Query: 40 --------NKRFGSSLDKAEDEFQM------QLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+ L+ + Q G VS G I + + +
Sbjct: 79 RPFNQVVNPEGTEKDLETFREIISQIQQRVKDPQGVGFTVSERGLTIRF-LDSILFDLGR 137
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYL 141
L LP+L +A L + + I ++ H D++ +N +S R+ + Y
Sbjct: 138 AELRPDALPLLDAVADALKQTDNY-IRVEGHADNLPINTAQFPSNWELSAARSIAVTRYF 196
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
I + R +S G+ P+ N ++ R N+R++I I
Sbjct: 197 IDKHGLEPRRLSSLGYGEYRPLYPNTSEANRAKNRRVDIVIL 238
>gi|52842260|ref|YP_096059.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54294942|ref|YP_127357.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella pneumophila str. Lens]
gi|54297971|ref|YP_124340.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella pneumophila str. Paris]
gi|148359617|ref|YP_001250824.1| peptidoglycan-associated lipoprotein [Legionella pneumophila str.
Corby]
gi|296107659|ref|YP_003619360.1| Peptidoglycan-associated lipoprotein precursor [Legionella
pneumophila 2300/99 Alcoy]
gi|129597|sp|P26493|PAL_LEGPN RecName: Full=Peptidoglycan-associated lipoprotein; AltName:
Full=19 kDa surface antigen; AltName: Full=PPL; Flags:
Precursor
gi|44129|emb|CAA43033.1| lipoprotein antigen [Legionella pneumophila]
gi|52629371|gb|AAU28112.1| peptidoglycan associated lipoprotein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53751756|emb|CAH13178.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella pneumophila str. Paris]
gi|53754774|emb|CAH16261.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella pneumophila str. Lens]
gi|148281390|gb|ABQ55478.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella pneumophila str. Corby]
gi|295649561|gb|ADG25408.1| Peptidoglycan-associated lipoprotein precursor [Legionella
pneumophila 2300/99 Alcoy]
gi|307610774|emb|CBX00386.1| peptidoglycan-associated lipoprotein precursor [Legionella
pneumophila 130b]
Length = 176
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 54/178 (30%), Gaps = 14/178 (7%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+LGL + ++ C D + E
Sbjct: 8 KLGLLVASAVLVAACSKTPGSADGGAAVGDGDATAQGLGQMTHFAGQEP-------GESY 60
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + + L K+LP + A L P + I HTD G+
Sbjct: 61 TTQAPHNQLYL------FAYDDSTLASKYLPSVNAQAEYLKTHPGARVMIAGHTDERGSR 114
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RAD + L S + I V + + P + + N+R+E
Sbjct: 115 EYNVALGERRADTVAEILRMA-GVSRQQIRVVSYGKERPANYGHDEASHAQNRRVEFI 171
>gi|237707828|ref|ZP_04538309.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229458156|gb|EEO63877.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 213
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 82/211 (38%), Gaps = 28/211 (13%)
Query: 1 MIKELG-LSMFIMTTISGCGLA-----------SREKKKVFLHKSNDTDIVNKRFGSSLD 48
M K++ L+ F++T + C +EK + + + T + +
Sbjct: 1 MKKKIIILAAFVITFFTACTSTHMITFSNAELSDKEKDMIENNSNYSTASIVGGSAKLVK 60
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCY---------------IPVHVSFVSEVFLEKKFL 93
+ D+ + + + D ++ + L ++
Sbjct: 61 EERDKAIQEKIEARRNKLKAIDGLSISSYKDKNGKEQFKATAQSEILFKFDSYELNEEAQ 120
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
ML + I+ + P+T I I HTD+IG + N+++S+ RA + +YL I+
Sbjct: 121 KMLSDLCNIITEIPNTKIKIIGHTDNIGEKQYNIILSKNRAAAVGNYLRTA-GIETNNIT 179
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G Y PI N ++ GR N+R+EI I
Sbjct: 180 EDGKGYSEPIADNTSEAGRAKNRRVEIFITN 210
>gi|255323068|ref|ZP_05364204.1| outer membrane fibronectin-binding protein [Campylobacter showae
RM3277]
gi|255299930|gb|EET79211.1| outer membrane fibronectin-binding protein [Campylobacter showae
RM3277]
Length = 332
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Query: 61 TGIVVSRIGDMITCYIPVHV--SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G+VV G + + K+L ++ +A + + P + + HTD
Sbjct: 208 AGVVVDETGCEKVIVLRDIGVNFAFDSYKITPKYLEEIRKVANFMGENPGYRVVLSGHTD 267
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S+G N +S++RA+ + ++ S I+ G+ P+ +N TK GR N+R+
Sbjct: 268 SVGAEAYNQKLSEKRANAVAK-ALEELGVSADKITTVGYGELKPVASNKTKEGRAENRRV 326
Query: 179 E 179
E
Sbjct: 327 E 327
>gi|253572950|ref|ZP_04850347.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|254885124|ref|ZP_05257834.1| lipoprotein PG3 [Bacteroides sp. 4_3_47FAA]
gi|251837477|gb|EES65571.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|254837917|gb|EET18226.1| lipoprotein PG3 [Bacteroides sp. 4_3_47FAA]
Length = 213
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 82/211 (38%), Gaps = 28/211 (13%)
Query: 1 MIKELG-LSMFIMTTISGCGLA-----------SREKKKVFLHKSNDTDIVNKRFGSSLD 48
M K++ L+ F++T + C +EK + + + T + +
Sbjct: 1 MKKKIIILAAFVITFFTACTSTHMITFSNAELSDKEKDMIENNSNYSTASIVGGSAKLVK 60
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCY---------------IPVHVSFVSEVFLEKKFL 93
+ D+ + + + D ++ + L ++
Sbjct: 61 EERDKAIQEKIEARRNKLKAIDGLSISSYKDKNGKEQFKATAQSEILFKFDSYELNEEAQ 120
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
ML + I+ + P+T I I HTD+IG + N+++S+ RA + +YL I+
Sbjct: 121 KMLSNLCNIITEIPNTKIKIIGHTDNIGEKQYNIILSKNRAAAVGNYLRTA-GIETNNIT 179
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G Y PI N ++ GR N+R+EI I
Sbjct: 180 EDGKGYSEPIADNTSEAGRAKNRRVEIFITN 210
>gi|229588852|ref|YP_002870971.1| hypothetical protein PFLU1321 [Pseudomonas fluorescens SBW25]
gi|229360718|emb|CAY47576.1| putative outer membrane protein [Pseudomonas fluorescens SBW25]
Length = 231
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 70/227 (30%), Gaps = 45/227 (19%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKV-FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+++ + + ++GC + + S+ +
Sbjct: 3 IMRTALPLVLLTGVLTGCAGLQKTDWPTCAAVGGVTGAAIGATESSAYAGYGALLVGGMA 62
Query: 60 DT---------------------------GIVVSRIGDMI----------------TCYI 76
G+ V G T I
Sbjct: 63 GAYCWVHGDGDEDGDGVPDSRDKCPGTPKGVQVDADGCPPAPPPVVVEEVVVVKEETIVI 122
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
L L +AT L + PS + + HTDS+G N +S++RA
Sbjct: 123 RDVHFQFDSAQLTAADKTKLDTVATRLKQEAPSAQLRVSGHTDSVGKDAYNQRLSEKRAH 182
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YLI GV + F+SV G +P+ N T GR N+R EIQI
Sbjct: 183 SVTDYLIGAGVPRSNFVSVTGAGESHPVADNKTAEGRALNRRTEIQI 229
>gi|146283087|ref|YP_001173240.1| OmpA family protein [Pseudomonas stutzeri A1501]
gi|145571292|gb|ABP80398.1| OmpA family protein [Pseudomonas stutzeri A1501]
gi|327481439|gb|AEA84749.1| OmpA family protein [Pseudomonas stutzeri DSM 4166]
Length = 260
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 62/152 (40%), Gaps = 3/152 (1%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ +R + L+ E + + + + + L+
Sbjct: 98 AEEELGKTSAQRAEARLEAREAQIRK--LQEDMQAKQTERGTLVTFGDVLFDYDRAELKP 155
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+ +Q +A LN P + ++ +TDS G+ + N +S+ RAD + + + +
Sbjct: 156 GGMRSVQKLADFLNDNPERKVIVEGYTDSTGSAEYNQRLSERRADAV-RMALVKMGVDPQ 214
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I +G+ +YP+ +N GR N+R+E+ I
Sbjct: 215 RIVSQGYGKEYPVASNSDSAGRAMNRRVEVTI 246
>gi|86147426|ref|ZP_01065738.1| flagellar motor protein [Vibrio sp. MED222]
gi|85834719|gb|EAQ52865.1| flagellar motor protein [Vibrio sp. MED222]
Length = 315
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNK 105
++ + + ++ I V +G I I +F FL+ KF P+++ +A ++
Sbjct: 160 MESIKKALEREIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKD 219
Query: 106 FPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P + I HTD+ ++N +S +RA + + + S++ + VRG A
Sbjct: 220 VPGI-VRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTE 278
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
P++ NDT+ R N+R+EI I
Sbjct: 279 PVEPNDTEWQRSLNRRVEISIM 300
>gi|332975535|gb|EGK12425.1| OmpA domain protein [Desmospora sp. 8437]
Length = 243
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + ++P H+ F + + K P L + L ++ T + I +TD G+
Sbjct: 124 EKGAKKVVIHVPGHILFDTDQSTIRAKARPELDKLGKSLKEYKGT-VRIYGYTDDRGSAA 182
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +SQERA+ +K+YL++ + + ++GF K+P+ N++ RQ N+R+EI +
Sbjct: 183 YNQKLSQERAEAVKAYLVKECGIAGDHLKIKGFGKKHPVVPNNSDSNRQKNRRVEIIVDS 242
Query: 185 R 185
+
Sbjct: 243 K 243
>gi|146306454|ref|YP_001186919.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145574655|gb|ABP84187.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 210
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 72/198 (36%), Gaps = 24/198 (12%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL-------------------- 47
+ T ++GC + SS
Sbjct: 10 LILASTLLTGCAGLQKSDWPTCAAVGGVGGAALGAIESSTWAGGGAVLGAGMAAAYCWVH 69
Query: 48 ---DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ + + + +V + + + V F + ++++ ++ +A +
Sbjct: 70 GADAQQVAVAEEVVVEEVVVAEPRAEAVRVELDVKFDF-DKSQVKQESYGDIKALADFMK 128
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
++P T ++ HTDS+G+ N +S+ RA+ ++ L+ + + + G+ P+
Sbjct: 129 QYPQTSTVVEGHTDSVGSDAYNQGLSERRANAVREVLVNQYGVESNRVQAVGYGESRPVA 188
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T GR N+R+E ++
Sbjct: 189 DNATAEGRAINRRVEAEV 206
>gi|325286633|ref|YP_004262423.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324322087|gb|ADY29552.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 235
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATIL 103
+ +DK + + ++ + G ++T V F + + + L +A +
Sbjct: 81 NRMDKQAQKIEEEIPGAQVERVDDGIVVTFDENSGVFFDTAKYNINGASKTSLDKLANVF 140
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
++P T I + HTDS G N+ +S+ RA+ + SYL +G++++R + F + P
Sbjct: 141 IEYPDTNILVVGHTDSSGAADYNMTLSKNRANAVTSYLTAKGIAASR-FTTEWFGEEKPT 199
Query: 164 DTNDTKVGRQNNQRIEIQIFPRGNI 188
N T GR N+R+ + I P +
Sbjct: 200 HDNSTPEGRAKNRRVNVAILPNEKM 224
>gi|4580973|gb|AAD24560.1|AF117968_1 OprF [Pseudomonas resinovorans]
Length = 340
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 68/162 (41%), Gaps = 10/162 (6%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP--- 77
+++++ D N ++DK D + V G +
Sbjct: 185 STKQEPAPAPVAEVCADSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVRVE 238
Query: 78 -VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++++ ++ +A +N++P+T ++ HTDS+GT N +S+ RAD
Sbjct: 239 LDVKFDFDKAKVKEESYGDIKNLADFMNQYPATTTTVEGHTDSVGTDAYNQKLSERRADA 298
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
++ L+ + + ++ G+ P+ N T GR N+R+
Sbjct: 299 VRDVLVDQYGVGSERVNAVGYGETRPVADNATADGRAVNRRV 340
>gi|107101208|ref|ZP_01365126.1| hypothetical protein PaerPA_01002240 [Pseudomonas aeruginosa PACS2]
Length = 331
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 72/177 (40%), Gaps = 7/177 (3%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLH-KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
++ + G A+ + V +D D V D + +
Sbjct: 156 MAGLGVGFNFGGSKAAPAPEPVADVCSDSDNDGVCDNVDKCPDTPANVTVDANGCPAV-- 213
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+++ + V F + +++ ++ +A + ++PST ++ HTDS+GT
Sbjct: 214 ---AEVVRVQLDVKFDF-DKSKVKENSYADIKNLADFMKQYPSTSTTVEGHTDSVGTDAY 269
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA+ ++ L+ ++ G+ P+ N T GR N+R+E ++
Sbjct: 270 NQKLSERRANAVRDVLVNEYGVEGGRVNAVGYGESRPVADNATAEGRAINRRVEAEV 326
>gi|262042941|ref|ZP_06016085.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039658|gb|EEW40785.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 568
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V R+ + + + + L+ L + P +I + HTDS+G K
Sbjct: 423 VQRVAPNVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSVGEEK 482
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N L+S +RA+ ++ ++ G + +V+G+ PI TN T GR N+R+EI + P
Sbjct: 483 ANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNGTPEGRALNRRVEISLVP 542
Query: 185 R 185
+
Sbjct: 543 Q 543
>gi|218710365|ref|YP_002417986.1| flagellar motor protein MotB [Vibrio splendidus LGP32]
gi|218323384|emb|CAV19561.1| Flagellar motor protein [Vibrio splendidus LGP32]
Length = 315
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNK 105
++ + + ++ I V +G I I +F FL+ KF P+++ +A ++
Sbjct: 160 MESIKKALEREIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKD 219
Query: 106 FPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P + I HTD+ ++N +S +RA + + + S++ + VRG A
Sbjct: 220 VPGI-VRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTE 278
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
P++ NDT+ R N+R+EI I
Sbjct: 279 PVEPNDTEWQRSLNRRVEISIM 300
>gi|222053440|ref|YP_002535802.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221562729|gb|ACM18701.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 455
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPM 95
D LDK + T + D+ T + +++ F + ++ K+
Sbjct: 305 DSDGDGVADYLDKCPG----TPKGTKVKADGCPDLETLSMSINIQFVTGKNDIQPKYAGE 360
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
++ +A + K+P+ I+ HTD++G+ N+ +SQ RA+ ++SYLI++ + ++ +
Sbjct: 361 IKKVADYMQKYPTVKGVIEGHTDNVGSAAANMKLSQRRAEAVRSYLIKKHGIAADRLTAK 420
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G+ PI N T+ GRQ N+RI +
Sbjct: 421 GYGMTRPIADNGTEAGRQQNRRITAVL 447
>gi|291519587|emb|CBK74808.1| Flagellar motor protein [Butyrivibrio fibrisolvens 16/4]
Length = 313
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 5/171 (2%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
S E V K + + ++ E++ + + V + + I
Sbjct: 129 SSESGEDISVAEAKEALEEAGASESENIAEEIEEKLALYGLQDQVEVDFNANYVMITING 188
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQER 133
+ F + L + L ++ ++ IL + +I I+ HTD S GT +NN ++S R
Sbjct: 189 ALLFNSGKAILTEDALEIVDNLSNILASYNQNIIEIEGHTDNVPMSSGTYENNDVLSMYR 248
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
A + + ++ + +I G PI N T GR N+R+EI+IF
Sbjct: 249 ALYVADRIREKTNLNPAYIKSAGRGEYVPIADNSTAEGRARNRRVEIKIFN 299
>gi|117928060|ref|YP_872611.1| OmpA/MotB domain-containing protein [Acidothermus cellulolyticus
11B]
gi|117648523|gb|ABK52625.1| OmpA/MotB domain protein [Acidothermus cellulolyticus 11B]
Length = 290
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 7/142 (4%)
Query: 49 KAEDEFQMQLQDTGIV--VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+ E Q + + V G +++ + + L +L IA +L
Sbjct: 139 RIEAALQAKGLADSVKFRVETRGLIVSIVTDQVLFDTGKADLRPIGRQVLDAIAPVLRGL 198
Query: 107 PSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I+++ HTD++ G +N +S RA + YL+ +S G+A P
Sbjct: 199 PN-DISVEGHTDNVPITGGPFASNWELSAIRATTVLRYLVSNDGLPEERMSATGYADTRP 257
Query: 163 IDTNDTKVGRQNNQRIEIQIFP 184
+ NDT RQ N+R++I +
Sbjct: 258 LVPNDTPEHRQQNRRVDIVVLS 279
>gi|94501021|ref|ZP_01307545.1| peptidoglycan-associated lipoprotein, putative [Oceanobacter sp.
RED65]
gi|94426768|gb|EAT11752.1| peptidoglycan-associated lipoprotein, putative [Oceanobacter sp.
RED65]
Length = 180
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 64/177 (36%), Gaps = 9/177 (5%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+L + ++GC + + ++ + S + +T
Sbjct: 8 KLFAVSALSLVMAGCASSGGTTDEAATTETEQQQSETQAVPESPNVD--------VNTDA 59
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ V L +F +L A L P + ++ H D GT+
Sbjct: 60 QAEAAQNNPLLDQTVVYFGFDRSELRPEFKDVLNAHAEYLVANPQASLTVEGHCDERGTV 119
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL + + RA+ +K YLI +GV+ ++ +V + + P + N+R E+
Sbjct: 120 EYNLALGERRAETVKRYLIVQGVAPSQLETVS-YGEERPAVMGSDESAWSKNRRAEL 175
>gi|121603984|ref|YP_981313.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans
CJ2]
gi|120592953|gb|ABM36392.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2]
Length = 220
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 35/215 (16%)
Query: 2 IKELGL-----SMFIMTTISGCGLASREKKKVF----------------LHKSNDTDIVN 40
++++ + + M +SGC S ++ + S
Sbjct: 1 MRKVFITTVTCAALAMAGLSGCANMSETQQGTAKGAGIGALAGAVLGAATNGSKGAATGA 60
Query: 41 KR-----------FGSSLDKAEDEFQMQLQDTGIVVSR-IGDMITCYIPVHV-SFVSEVF 87
+ + + + TG+ VS+ + + IP V V
Sbjct: 61 VLGGALGAGGGYIWSKKMQDQKIAMERATAGTGVAVSQTQDNRLKLDIPSDVSFDVGRSA 120
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ F P+L AT LN+ P T ++I HTDS G+ N +S +RA+ + YL+ R
Sbjct: 121 IKSNFAPVLTNFATSLNQNPITTVSIIGHTDSTGSDSVNNPLSVDRANAARDYLVGR-GV 179
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + I+ G + PI N + GR N+R+EI +
Sbjct: 180 AAQRIATDGRGSREPIADNSSAQGRAKNRRVEIYV 214
>gi|238924159|ref|YP_002937675.1| hypothetical protein EUBREC_1797 [Eubacterium rectale ATCC 33656]
gi|238875834|gb|ACR75541.1| hypothetical protein EUBREC_1797 [Eubacterium rectale ATCC 33656]
Length = 275
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 66/171 (38%), Gaps = 7/171 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQDTGIVVSRIGDMITCYIP 77
+ + + + + + E + + + V + +
Sbjct: 94 STTESTTEGDDKNAEEQYEQMELSESEKMSEQIEKQLENTSLQDAVEVDFNAQYVQLSLN 153
Query: 78 VHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG-----TLKNNLLISQ 131
+ F + + ++ P++ I++IL + +I I+ HTD++ ++N ++S
Sbjct: 154 GALLFESGKADVMEEAYPVVNKISSILAAYQDNLIEIEGHTDNVPVSSRSKYESNDVLSM 213
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + +Y+ + I G P+ N T GR N+R+EI++
Sbjct: 214 YRALSVANYIRDNTSLNPAHIKSSGRGDYDPVADNSTPEGRARNRRVEIKV 264
>gi|5081413|gb|AAD39368.1|AF117973_1 outer membrane protein OprF [Pseudomonas stutzeri DSM 4166]
Length = 323
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+++ + V F + + ++ ++ +A + ++P T ++ HTDS+GT
Sbjct: 208 EPEPAPEVVRVELDVKFDF-DKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSVGTD 266
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ N +S+ RA+ +++ L+ ++ G+ P+ N T+ GRQ N+R+E
Sbjct: 267 QYNQRLSERRAEAVRNVLVNEYGVQGNRVNSVGYGESRPVADNSTEEGRQINRRVE 322
>gi|332978756|gb|EGK15448.1| outer membrane porin OprF [Psychrobacter sp. 1501(2011)]
Length = 304
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ Q + I V + + +T + + + ++ ++L L A + K+ T +
Sbjct: 173 APRPQPKPQPISVPVLEEKVTINLQ-VLFDNDKSVVKPQYLRDLSTAAEFMQKYSDTTVV 231
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTDS + N+ +S+ RA +K + + S I G+ PI +N T GR
Sbjct: 232 IEGHTDSNASDAYNIALSKRRAHAVKEVFVNQYGISPARIQAVGYGESRPIASNATAEGR 291
Query: 173 QNNQRIEIQI 182
Q N+R+ I
Sbjct: 292 QMNRRVVAVI 301
>gi|312131420|ref|YP_003998760.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311907966|gb|ADQ18407.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 532
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
++ + + I + ++ LEK+ L + +L K P+ I +Q
Sbjct: 404 KEITGQDLETAPIKAGTAITLNNVFFEFAKATLEKESFLELDRLIALLVKNPNMAIEVQG 463
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD++G+ N+ +SQ+RAD +K+Y +++ + I+ GF P+ +N+T G+ N
Sbjct: 464 HTDNVGSDNANMRLSQQRADAVKAYFVEK-GIATDRITSTGFGESRPVASNETTEGQAKN 522
Query: 176 QRIEIQIFPR 185
+R+E I +
Sbjct: 523 RRVEFVILRK 532
>gi|289577780|ref|YP_003476407.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9]
gi|289527493|gb|ADD01845.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9]
Length = 239
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 6/156 (3%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKF 92
G + E + + + + + F + +
Sbjct: 73 QGNSGDKNSLGEIEKQLEGFVKENNLQGMVTSYIDERGLVISLQDTILFDLGSADVHPEE 132
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSS 148
+L I +L P+ I ++ TD + N N +S RA + L+
Sbjct: 133 KDVLIKIGNMLKTLPN-HIRVEGFTDDLPIHNNKFDSNWELSVIRATNVVKILVHEAGVD 191
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ IS G+ P+ ND++ R+ N+R++I I
Sbjct: 192 PKKISAVGYGEYRPVVPNDSEEHRRLNRRVDIVIMN 227
>gi|91215766|ref|ZP_01252736.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
gi|91186232|gb|EAS72605.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
Length = 231
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 81/220 (36%), Gaps = 36/220 (16%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKV--------------FLHKSNDTDIVNKR------ 42
K LGL + I S C K + +N D N
Sbjct: 7 KILGLLLAIAFLFSSCEAVKNTNKTQRVGAIGAIGGAVIGGVIGNNTGDGDNSVLGAIIG 66
Query: 43 ----------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH---VSFVSEVFLE 89
G+++DK E + ++ G V+R+G+ I + ++ +E
Sbjct: 67 GVVGGAAGAYIGNTMDKQAKEIEEEIP--GAEVTRVGEGINVTFDENSGVYFTTNKSNIE 124
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
K L + I K+P T I ++ HTDS G+ N+ +S+ RA + + S+
Sbjct: 125 GKSEISLLKLIGIFQKYPKTNIIVEGHTDSTGSDSYNMDLSKRRAQSVTD-YLSNNGISS 183
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
I + + P N + R N+R+E+ I +K
Sbjct: 184 SRIKTNWYGEEQPKFDNTSPEERSKNRRVELAIVANEELK 223
>gi|319779310|ref|YP_004130223.1| Outer membrane protein A precursor [Taylorella equigenitalis MCE9]
gi|317109334|gb|ADU92080.1| Outer membrane protein A precursor [Taylorella equigenitalis MCE9]
Length = 188
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 67/187 (35%), Gaps = 7/187 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM---- 56
M + L++ + + +G A V + +
Sbjct: 1 MTSKFALAIALAFS-AGVASAQTVDNWVSDFGDPVVSDFGDCWQNDFWTPATALPECGGV 59
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ +T + L+ + +L IA + + H
Sbjct: 60 TEPSAPAAQPITANKVTFNA-DTFFDFDKSSLKPEGRTVLDQIAEQVKLLTLESLITVGH 118
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDSIGT N +S+ RA +K+YLI +GV + + I G PI N T+ GR N+
Sbjct: 119 TDSIGTNAYNQKLSERRAATVKNYLIDKGVPAEQII-ASGRGETQPIADNRTREGRAQNR 177
Query: 177 RIEIQIF 183
R++I++
Sbjct: 178 RVDIEMV 184
>gi|299137972|ref|ZP_07031152.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
gi|298599902|gb|EFI56060.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
Length = 513
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 63/143 (44%), Gaps = 2/143 (1%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
++ + ++ + QL ++ + S + + + ++ L+ L +
Sbjct: 360 AQKSEADASAVREKLRAQL-NSVLATSESARGLIVNMSDVLFDTAKFTLKPDTKVSLAKV 418
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
ATIL +P + ++ +TDS+G + N +S+ RA+ + + + ++ G+
Sbjct: 419 ATILQLYPGLKVQVEGYTDSVGGDEYNQKLSENRANAVHD-FLVQNGVPAANVTAAGYGK 477
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
P+ N T GR N+R+ + +
Sbjct: 478 NKPVADNGTAAGRAQNRRVNLVV 500
>gi|213963452|ref|ZP_03391706.1| OmpA family protein [Capnocytophaga sputigena Capno]
gi|213953860|gb|EEB65188.1| OmpA family protein [Capnocytophaga sputigena Capno]
Length = 454
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 17 GCGLASREK--------KKVFLHKSNDT----DIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
GC + K V K N+ D D+ +E +
Sbjct: 275 GCPDTDGDGVADNVDQCKDVAGPKENNGCPWPDTDGDGVLDKDDECPEEAGPASNNGCPE 334
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V++ + F ++ + + +L I +LNK+ + +I+ +TD+ G
Sbjct: 335 VTQEVQTQLNSFAKTILFDVNKATIRPESATVLNNIVNVLNKYKNAKFSIEGYTDTSGNK 394
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S++RA +K+YLI +G+ R ++ +GF + PI +N TK GR+ N+R+EI +
Sbjct: 395 AKNQKLSEDRAYSVKAYLIDKGIDQAR-LTAKGFGPEKPIASNKTKKGRELNRRVEINLV 453
>gi|28898406|ref|NP_798011.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
2210633]
gi|28806623|dbj|BAC59895.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
2210633]
Length = 214
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 73/198 (36%), Gaps = 11/198 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K + + + + ++ C +S + + D D ++ +
Sbjct: 9 IMKNITI-IALSLVVAACSSSSDRGDEYDYIDTPIADQWADHQDDDSDGVINQ-RDLCPG 66
Query: 61 T--GIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
T G + G + + F ++ ++ L ++PST I +
Sbjct: 67 TPLGAEIDNDGCGSYANSSQQMQIRVLFANDSDEINPVFAKQIRELSDFLKEYPSTSIEL 126
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
Q + G ++NL +S+ RA+ + + + + +++ G+ T +V
Sbjct: 127 QGYASRTGGSEHNLDLSKRRAENV-RKALLQNGITPDRVTIVGYGDTVLATTGTDEVSHA 185
Query: 174 NNQRIEIQIFP-RGNIKK 190
N+R+ + +G +KK
Sbjct: 186 LNRRVTATVVGHKGEVKK 203
>gi|167618284|ref|ZP_02386915.1| ompA family protein [Burkholderia thailandensis Bt4]
Length = 171
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+++ Q TG V+ D + +P V+F + + F P+L +AT LN+ P
Sbjct: 31 IKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAVTPAFTPLLNDLATTLNQNP 90
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
++ +TDS G+ +N +SQ RA + + + + + +S +G PI N
Sbjct: 91 QITASVVGYTDSTGSAAHNQTLSQNRAQSVVN-ALAQRGVAATRLSAQGMGASNPIADNA 149
Query: 168 TKVGRQNNQRIEIQI 182
T+ GR N+R+EI +
Sbjct: 150 TEAGRAQNRRVEIYL 164
>gi|319793387|ref|YP_004155027.1| peptidoglycaN-associated lipoprotein [Variovorax paradoxus EPS]
gi|315595850|gb|ADU36916.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus EPS]
Length = 172
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 67/181 (37%), Gaps = 12/181 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K S+ I+ I+GC ++ + + T S++ +
Sbjct: 1 MLKRTIYSLAIVALIAGCSSGTKLN-ETPVTDGRGTAGQQGGGASTVTPVNADQSAATAQ 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V+RI ++ +F ++ A L P I+I+ HTD
Sbjct: 60 GPVGVARI----------VYFDYDSYTVKPEFQSIVDGHARFLKSAPQRRISIEGHTDER 109
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + NL + Q+RA+ ++ + ++ I F + P + N+R EI
Sbjct: 110 GGREYNLALGQKRAEAVRR-ALTLLGVNDSQIEAVSFGKEKPAVQGGGEEAWAQNRRAEI 168
Query: 181 Q 181
+
Sbjct: 169 R 169
>gi|5081415|gb|AAD39370.1|AF117975_1 outer membrane protein OprF [Pseudomonas stutzeri ZoBell]
Length = 321
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+++ + V F + + ++ ++ +A + ++P T ++ HTDS+GT
Sbjct: 206 EPEPAPEVVRVELDVKFDF-DKSRVREESYSDIKNLADFMQQYPQTTTTVEGHTDSVGTD 264
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ N +S+ RA+ +++ L+ ++ G+ P+ N T+ GRQ N+R+E
Sbjct: 265 QYNQRLSERRAEAVRNVLVNEHGVQGNRVNSVGYGESRPVADNSTEEGRQINRRVE 320
>gi|148549426|ref|YP_001269528.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148513484|gb|ABQ80344.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 263
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
N + + + D + Q L + + ++ L+
Sbjct: 104 NASAQRAQAKLDARDAQIAKLQDSLNA-----KQTDRGTLVTFGDVLFDFNKAELKSSAY 158
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
P + +A L + P + ++ +TDS+G+ N +S+ RA+ ++ L++ GV R +S
Sbjct: 159 PNITKLAQFLQENPERKVIVEGYTDSVGSANYNQTLSERRANSVRMALVRAGVDPARIVS 218
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+G+ +YP+ N + GR N+R+E+ I
Sbjct: 219 -QGYGKEYPVADNSSNSGRAQNRRVEVTI 246
>gi|190572988|ref|YP_001970833.1| putative outer membrane protein [Stenotrophomonas maltophilia
K279a]
gi|190010910|emb|CAQ44519.1| putative outer membrane protein [Stenotrophomonas maltophilia
K279a]
Length = 366
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 6/151 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
G ++ +D+ I ++ + + L + +L
Sbjct: 214 ADLDDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSNLRPDAVAILS 273
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IL ++P + + HTDS GT N +S+ RA + +YL + GV + R + G+
Sbjct: 274 EATEILKRYPDLRVEVAGHTDSKGTDAYNQKLSERRATAVYNYLTKNGVDAGRLVGPIGY 333
Query: 158 AYKYPIDTN------DTKVGRQNNQRIEIQI 182
PI N D GR N+R E+ +
Sbjct: 334 GESRPIAPNTNPDGSDNPEGRAKNRRTELNV 364
>gi|194364578|ref|YP_002027188.1| OmpA/MotB domain-containing protein [Stenotrophomonas maltophilia
R551-3]
gi|194347382|gb|ACF50505.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
Length = 362
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 6/151 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
G ++ +D+ I ++ + + L + +L
Sbjct: 210 ADLDDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSNLRPDAVAILS 269
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IL ++P + + HTDS GT N +S+ RA + +YL + GV + R + G+
Sbjct: 270 EATEILKRYPDLRVEVAGHTDSKGTDAYNQKLSERRATAVYNYLTKNGVDAGRLVGPIGY 329
Query: 158 AYKYPIDTN------DTKVGRQNNQRIEIQI 182
PI N D GR N+R E+ +
Sbjct: 330 GESRPIAPNTNPDGSDNPEGRAKNRRTELNV 360
>gi|304384331|ref|ZP_07366742.1| lipoprotein PG3 [Prevotella marshii DSM 16973]
gi|304334647|gb|EFM00929.1| lipoprotein PG3 [Prevotella marshii DSM 16973]
Length = 226
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 81/210 (38%), Gaps = 29/210 (13%)
Query: 2 IKELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS------------ 46
+K+ + +M + CG + + + + +
Sbjct: 1 MKKTKIISLLMCGSVLLFSCGSNLKNGALIGAGGGAVLGGIIGKIAGNTAVGAAMGTAVG 60
Query: 47 ----------LDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSFV-SEVFLEKKF 92
+DK + + Q Q+Q+ + + + + F ++ L
Sbjct: 61 AGAGALIGKHMDKVKAQTQAQVQNAKVEEVTDVNGLKAVKVTFDSGILFALNKAELNATS 120
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L + +L K + IQ +TDS G NL +S RA + SYL Q GV ++F
Sbjct: 121 KNELMNFSNVLKKNTDCQVDIQGYTDSTGNDDINLPLSNSRAQAVVSYLAQCGVPYSQFK 180
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+V+G+ P+ N T+ GR+ N+R+E+ I
Sbjct: 181 NVKGYGSSNPVADNSTEAGRKQNRRVEVYI 210
>gi|325278144|ref|ZP_08143653.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51]
gi|324096719|gb|EGB95056.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51]
Length = 263
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 66/166 (39%), Gaps = 6/166 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYI 76
+ ++ +V + ++ +A+ + + + +
Sbjct: 82 TNQRVEVAKQTIALRTAEGELKNAAAQRAQAKLDARDAQIAKLQNSLNAKQTDRGTLVTF 141
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ L+ P + +A L + P + ++ +TDS+G+ N +S+ RA+
Sbjct: 142 GDVLFDFNKAELKSNAYPNITKLAQFLQENPERKVIVEGYTDSVGSASYNQSLSERRANS 201
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + R I +G+ +YP+ N + GR N+R+E+ I
Sbjct: 202 V-RMALVRAGVDPARIVAQGYGKEYPVADNSSNSGRAQNRRVEVTI 246
>gi|66045337|ref|YP_235178.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Pseudomonas syringae pv. syringae B728a]
gi|63256044|gb|AAY37140.1| Thrombospondin type 3 repeat:OmpA/MotB:OmpF [Pseudomonas syringae
pv. syringae B728a]
gi|330973748|gb|EGH73814.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Pseudomonas syringae pv. aceris str. M302273PT]
Length = 344
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + +D N ++DK D + V G +
Sbjct: 178 GGSKKVEAAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVR 231
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ ++ +A + ++P T ++ HTDS+G N +S+ RA
Sbjct: 232 VELDVKFDFDKSVVKPSSYGDIKNLADFMQQYPQTTTTVEGHTDSVGPDAYNQKLSERRA 291
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +K L+ + ++ G+ P+ N T+ GR N+R+E ++ +
Sbjct: 292 NAVKQVLVNQYGVGASRVNSVGYGETKPVADNATEAGRAVNRRVEAEVEAQAK 344
>gi|226314899|ref|YP_002774795.1| chemotaxis protein [Brevibacillus brevis NBRC 100599]
gi|226097849|dbj|BAH46291.1| probable chemotaxis protein [Brevibacillus brevis NBRC 100599]
Length = 260
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 62/170 (36%), Gaps = 6/170 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G +E + + ++ ++ ++ L + + + + +P
Sbjct: 89 GEKVKEGSEDTANVPKRPMGLSDSSERDMETVRNQLSSALAELNLDYEETEEGLRIRLPE 148
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQER 133
+ F L+ + ++ +A +L +F + I+ +TD + ++N +S R
Sbjct: 149 TILFTSGSADLQAQGKQVVGTVAGVLKRF-EHKVRIEGYTDDVPISRSSFQSNWELSSAR 207
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + ++ +V G P+ N R N+R+EI I
Sbjct: 208 AISVMREMVDANSLPASRFTVAGLGEYKPLVDNSNAENRAKNRRVEIVIL 257
>gi|138896104|ref|YP_001126557.1| flagellar motor protein MotB [Geobacillus thermodenitrificans
NG80-2]
gi|134267617|gb|ABO67812.1| Chemotaxis MotB protein [Geobacillus thermodenitrificans NG80-2]
Length = 260
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 5/166 (3%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV- 83
+++ + + +K + Q + S + + I + F
Sbjct: 84 QEREKQPSPAMSQKEKEGLAQVKEKIDVYIQENKLGGKLQTSLTEEGLAITILDDILFDS 143
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKS 139
+ K + +A +L P + I HTD++ +N +S RA
Sbjct: 144 GSAEVRMKDRRLASEVAALLVMNPPRNVIISGHTDNVPIHNAQFASNWELSVMRAVNFMK 203
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L++ R+ S +G+ PI +N+T GR N+R+EI I PR
Sbjct: 204 VLLENKQLDPRYFSAKGYGEYKPIASNETAAGRMKNRRVEILILPR 249
>gi|71736714|ref|YP_274287.1| OprF [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257486264|ref|ZP_05640305.1| OprF [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|289627226|ref|ZP_06460180.1| OprF [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289650179|ref|ZP_06481522.1| OprF [Pseudomonas syringae pv. aesculi str. 2250]
gi|298486585|ref|ZP_07004644.1| outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|71557267|gb|AAZ36478.1| OprF [Pseudomonas syringae pv. phaseolicola 1448A]
gi|298158911|gb|EFH99972.1| outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|320324974|gb|EFW81046.1| OprF [Pseudomonas syringae pv. glycinea str. B076]
gi|320329128|gb|EFW85126.1| OprF [Pseudomonas syringae pv. glycinea str. race 4]
gi|330867622|gb|EGH02331.1| OprF [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330881064|gb|EGH15213.1| OprF [Pseudomonas syringae pv. glycinea str. race 4]
gi|330888250|gb|EGH20911.1| OprF [Pseudomonas syringae pv. mori str. 301020]
gi|330988403|gb|EGH86506.1| OprF [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331010567|gb|EGH90623.1| OprF [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 344
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + +D N ++DK D + V G +
Sbjct: 178 GGSKKVEAAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVR 231
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ ++ +A + ++P T ++ HTDS+G N +S+ RA
Sbjct: 232 VELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTTTVEGHTDSVGPDAYNQKLSERRA 291
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +K L+ + ++ G+ P+ N T+ GR N+R+E ++ +
Sbjct: 292 NAVKQVLVNQYGVGASRVNSVGYGESRPVADNATEAGRAVNRRVEAEVEAQAK 344
>gi|290509857|ref|ZP_06549228.1| outer membrane protein [Klebsiella sp. 1_1_55]
gi|289779251|gb|EFD87248.1| outer membrane protein [Klebsiella sp. 1_1_55]
Length = 568
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V + + + + + L+ L + P +I + HTDS+G K
Sbjct: 423 VQHVAPDVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSVGEEK 482
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N L+S +RA+ ++ ++ G + +V+G+ PI TNDT GR N+R+EI + P
Sbjct: 483 ANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISLVP 542
Query: 185 R 185
+
Sbjct: 543 Q 543
>gi|288935830|ref|YP_003439889.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
gi|288890539|gb|ADC58857.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
Length = 568
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V + + + + + L+ L + P +I + HTDS+G K
Sbjct: 423 VQHVAPDVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSVGEEK 482
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N L+S +RA+ ++ ++ G + +V+G+ PI TNDT GR N+R+EI + P
Sbjct: 483 ANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISLVP 542
Query: 185 R 185
+
Sbjct: 543 Q 543
>gi|238894412|ref|YP_002919146.1| putative outer membrane protein [Klebsiella pneumoniae NTUH-K2044]
gi|238546728|dbj|BAH63079.1| putative outer membrane protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 568
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V + + + + + L+ L + P +I + HTDS+G K
Sbjct: 423 VQHVAPDVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSVGEEK 482
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N L+S +RA+ ++ ++ G + +V+G+ PI TNDT GR N+R+EI + P
Sbjct: 483 ANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISLVP 542
Query: 185 R 185
+
Sbjct: 543 Q 543
>gi|284924249|emb|CBG37350.1| putative type VI secretion protein [Escherichia coli 042]
Length = 576
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V++ + + + + L+ L + +I + HTD+ G
Sbjct: 433 KVTQTPKTVRLN-SLALFDAGKWTLKPGATKWLVNALVDIKAKAGWLIVVSGHTDNTGDP 491
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA+ ++ ++ G +V+G+ P+ NDT GR N+R+EI +
Sbjct: 492 LRNQALSLKRAEAVRDWMRDTGDIPQSCFAVQGYGESRPVAPNDTAEGRARNRRVEISLV 551
Query: 184 PRGN 187
P+ +
Sbjct: 552 PQAD 555
>gi|218696635|ref|YP_002404302.1| hypothetical protein EC55989_3336 [Escherichia coli 55989]
gi|218353367|emb|CAU99387.1| conserved hypothetical protein; putative membrane protein
[Escherichia coli 55989]
Length = 608
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V++ + + + + L+ L + +I + HTD+ G
Sbjct: 465 KVTQTPKTVRLN-SLALFDAGKWTLKPGATKWLVNALVDIKAKAGWLIVVSGHTDNTGDP 523
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA+ ++ ++ G +V+G+ P+ NDT GR N+R+EI +
Sbjct: 524 LRNQALSLKRAEAVRDWMRDTGDIPQSCFAVQGYGESRPVAPNDTAEGRARNRRVEISLV 583
Query: 184 PRGN 187
P+ +
Sbjct: 584 PQAD 587
>gi|4530365|gb|AAD22005.1| major outer membrane protein [Pseudomonas fluorescens]
Length = 343
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 55/131 (41%), Gaps = 4/131 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 213 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGH 272
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS+G N +S+ RA+ +K L + + + G+ P+ N T+ GR N+
Sbjct: 273 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVADNATEAGRAVNR 332
Query: 177 RIEIQIFPRGN 187
R+E Q+ +
Sbjct: 333 RVEAQVEAQAK 343
>gi|330808432|ref|YP_004352894.1| Outer membrane porin F [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376540|gb|AEA67890.1| Outer membrane porin F [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 344
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 55/131 (41%), Gaps = 4/131 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 214 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGH 273
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS+G N +S+ RA+ +K L + + + G+ P+ N T+ GR N+
Sbjct: 274 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVADNATEAGRAVNR 333
Query: 177 RIEIQIFPRGN 187
R+E Q+ +
Sbjct: 334 RVEAQVEAQAK 344
>gi|297544067|ref|YP_003676369.1| OmpA/MotB domain-containing protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841842|gb|ADH60358.1| OmpA/MotB domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 239
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 6/156 (3%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKF 92
G + E + + + + + F + +
Sbjct: 73 QGNSGDKNSLGEIEKQLEGFVKENNLQGMVTSYIDERGLVISLQDTLLFDLGSADVHPEE 132
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSS 148
+L I +L P+ I ++ TD + N N +S RA + L+
Sbjct: 133 KDVLIKIGNMLKTLPN-HIRVEGFTDDLPIHNNKFDSNWELSVIRATNVVKILVHEAGVD 191
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ IS G+ P+ ND++ R+ N+R++I I
Sbjct: 192 PKKISAVGYGEYRPVVPNDSEEHRRLNRRVDIVIMN 227
>gi|323498433|ref|ZP_08103429.1| outer membrane protein A precursor [Vibrio sinaloensis DSM 21326]
gi|323316506|gb|EGA69521.1| outer membrane protein A precursor [Vibrio sinaloensis DSM 21326]
Length = 322
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ ++ L+ + +L + +N++P + + +TD+ G N +S++RA
Sbjct: 209 VDSGSFALNSTELKPESKQILNELVVFMNEYPQANVEVVGYTDTSGAAAYNQKLSEKRAQ 268
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L G+ ++R I+VRG PI +N+TK GR N+R+EI +
Sbjct: 269 SVSDALQAEGIDASR-ITVRGEGENNPIASNETKEGRVQNRRVEITV 314
>gi|295136349|ref|YP_003587025.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda
SM-A87]
gi|294984364|gb|ADF54829.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda
SM-A87]
Length = 316
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 41 KRFGSSLDKAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPML 96
+ ++ +D L + G+ V + + + + F S + +
Sbjct: 151 AAKDAKMNALKDAISKALTDFEGKGLTVEQRDGKVYVSMENKLLFNSGSWAVNADGRQAV 210
Query: 97 QLIATILNKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ ++L + P + I+ HTD+ G LK+N +S +RA I L + +
Sbjct: 211 NQLGSVLAQNPDISVLIEGHTDNVPYGGNGPLKDNWDLSTKRATAIVQILRENSNIDPQN 270
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ G P+ TNDT G+ N+RIE+ + P+
Sbjct: 271 LTAAGRGEYAPVATNDTAEGKAKNRRIEVILTPK 304
>gi|169123287|gb|ACA47115.1| OmpF [Pseudomonas putida]
Length = 343
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 55/131 (41%), Gaps = 4/131 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 213 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGH 272
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS+G N +S+ RA+ +K L + + + G+ P+ N T+ GR N+
Sbjct: 273 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVADNKTEAGRAVNR 332
Query: 177 RIEIQIFPRGN 187
R+E Q+ +
Sbjct: 333 RVEAQVEAQAK 343
>gi|33598186|ref|NP_885829.1| putative outer membrane protein [Bordetella parapertussis 12822]
gi|33566744|emb|CAE38956.1| putative outer membrane protein [Bordetella parapertussis]
Length = 208
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 72/203 (35%), Gaps = 25/203 (12%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR--------------------- 42
+ + ISGC + +
Sbjct: 2 RVAVVSAAALLISGCATPQQTNTAIGTGAGAAVGAGIGALIGHGKGAAIGAGIGAVAGGL 61
Query: 43 FGSSLDKAEDEFQMQLQDT-GIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
G + + + Q + GI V + D + IP +V + L+ LP+L +
Sbjct: 62 IGYNWSGVKQDVQQSGASSLGIDVVEMPDGSLKVNIPSNVSFDTDKSQLKPALLPVLDSV 121
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A LN+ P + HTDS G+ +N +S RA + S + + + ++V G
Sbjct: 122 ARALNQHPELRTKVVGHTDSTGSAAHNQQLSVNRARAVTS-YLGKQGVAQGRMTVEGRGA 180
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
P+ N T GR N+R+E+ +
Sbjct: 181 NDPVGDNATAEGRAANRRVEVYL 203
>gi|77918162|ref|YP_355977.1| hypothetical protein Pcar_0547 [Pelobacter carbinolicus DSM 2380]
gi|77544245|gb|ABA87807.1| conserved OmpA/MotB domain protein [Pelobacter carbinolicus DSM
2380]
Length = 420
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 13/168 (7%)
Query: 24 EKKKVFLHKSNDTDIVNKRFG--SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ K + + G LD+ D + G+ V G + + ++
Sbjct: 260 DTPKGAPVDAKGCPLDTDGDGVFDYLDQCPDTPK------GMNVDEKGCDLKLTLRINFD 313
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F + ++ +F L A + + I + HTDS G N +S++RA+ ++
Sbjct: 314 F-DQAVIKPEFKGELDKAAAFVRANANVPFILLAGHTDSKGRDTYNQRLSEKRAEAVRQA 372
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI---QIFPR 185
LI + RG+ P+ TNDT+ GR N+R+E+ + P
Sbjct: 373 LIDNYGLDAAKLKSRGYGEAQPVATNDTEEGRYLNRRVELICCVVLPE 420
>gi|289664228|ref|ZP_06485809.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289668820|ref|ZP_06489895.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 365
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
G ++ +D+ I ++ + ++ L + +L
Sbjct: 216 DDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAISILSEAT 275
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
IL ++P + + HTDS GT N +S+ RA + YL + GV ++R + G+
Sbjct: 276 EILKRYPDLKVEVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGES 335
Query: 161 YPIDTN------DTKVGRQNNQRIEIQI 182
PI N D GR N+R E+ +
Sbjct: 336 RPIAPNTNPDGSDNPEGRAKNRRTELNV 363
>gi|166710885|ref|ZP_02242092.1| outer membrane protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 365
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
G ++ +D+ I ++ + ++ L + +L
Sbjct: 216 DDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAISILSEAT 275
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
IL ++P + + HTDS GT N +S+ RA + YL + GV ++R + G+
Sbjct: 276 EILKRYPDLKVEVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGES 335
Query: 161 YPIDTN------DTKVGRQNNQRIEIQI 182
PI N D GR N+R E+ +
Sbjct: 336 RPIAPNTNPDGSDNPEGRAKNRRTELNV 363
>gi|15596974|ref|NP_250468.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa PAO1]
gi|116049726|ref|YP_791468.1| major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa UCBPP-PA14]
gi|152985208|ref|YP_001348883.1| outer membrane protein OprF precursor [Pseudomonas aeruginosa PA7]
gi|218892271|ref|YP_002441138.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa LESB58]
gi|254234871|ref|ZP_04928194.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa C3719]
gi|254240119|ref|ZP_04933441.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa 2192]
gi|296389835|ref|ZP_06879310.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa PAb1]
gi|313110468|ref|ZP_07796353.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa 39016]
gi|130680|sp|P13794|PORF_PSEAE RecName: Full=Outer membrane porin F; Flags: Precursor
gi|9947757|gb|AAG05166.1|AE004603_6 Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa PAO1]
gi|151508|gb|AAA25973.1| porin protein F precursor [Pseudomonas aeruginosa]
gi|4186419|gb|AAD11568.1| major outer membrane protein OprF precursor [Pseudomonas aeruginosa
PAO1]
gi|115584947|gb|ABJ10962.1| major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa UCBPP-PA14]
gi|126166802|gb|EAZ52313.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa C3719]
gi|126193497|gb|EAZ57560.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa 2192]
gi|150960366|gb|ABR82391.1| outer membrane protein OprF precursor [Pseudomonas aeruginosa PA7]
gi|218772497|emb|CAW28279.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa LESB58]
gi|310882855|gb|EFQ41449.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa 39016]
Length = 350
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 72/177 (40%), Gaps = 7/177 (3%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLH-KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
++ + G A+ + V +D D V D + +
Sbjct: 175 MAGLGVGFNFGGSKAAPAPEPVADVCSDSDNDGVCDNVDKCPDTPANVTVDANGCPAV-- 232
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+++ + V F + +++ ++ +A + ++PST ++ HTDS+GT
Sbjct: 233 ---AEVVRVQLDVKFDF-DKSKVKENSYADIKNLADFMKQYPSTSTTVEGHTDSVGTDAY 288
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA+ ++ L+ ++ G+ P+ N T GR N+R+E ++
Sbjct: 289 NQKLSERRANAVRDVLVNEYGVEGGRVNAVGYGESRPVADNATAEGRAINRRVEAEV 345
>gi|260363437|ref|ZP_05776283.1| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|260876568|ref|ZP_05888923.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|260895072|ref|ZP_05903568.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308086012|gb|EFO35707.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308093570|gb|EFO43265.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308113744|gb|EFO51284.1| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|328473927|gb|EGF44744.1| putative outer membrane protein [Vibrio parahaemolyticus 10329]
Length = 205
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 72/197 (36%), Gaps = 11/197 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + + + + ++ C +S + + D D ++ + T
Sbjct: 1 MKNITI-IALSLVVAACSSSSDRGDEYDYIDTPIADQWADHQDDDSDGVINQ-RDLCPGT 58
Query: 62 --GIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
G + G + + F ++ ++ L ++PST I +Q
Sbjct: 59 PLGAEIDNDGCGSYANSSQQMQIRVLFANDSDEINPVFAKQIRELSDFLKEYPSTSIELQ 118
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ G ++NL +S+ RA+ + + + + +++ G+ T +V
Sbjct: 119 GYASRTGGSEHNLDLSKRRAENV-RKALLQNGITPDRVTIVGYGDTVLATTGTDEVSHAL 177
Query: 175 NQRIEIQIFP-RGNIKK 190
N+R+ + +G +KK
Sbjct: 178 NRRVTATVVGHKGEVKK 194
>gi|90579839|ref|ZP_01235647.1| flagellar motor protein [Vibrio angustum S14]
gi|90438724|gb|EAS63907.1| flagellar motor protein [Vibrio angustum S14]
Length = 307
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 6/173 (3%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+G + KK + ND + + + ++ D I + +G +
Sbjct: 119 AGKLTGGQSKKTATQNNENDESEAEQMQEKLKEVLTKALEREISDKIIEIENLGQQLVIR 178
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLIS 130
I SF FL+ KF P+++ +A ++ P I + HT S ++N +S
Sbjct: 179 IREKGSFPEGSAFLQPKFKPLVRQVAMLVKDVPGI-IRVTGHTASDKLDSELYRSNWDLS 237
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA + + + + + V G A PI N T+ G+ N+R+EI I
Sbjct: 238 AQRAVSVAQEMEKVEGFDHTKMRVVGLADTQPIADNKTQEGKAKNRRVEISIM 290
>gi|108759406|ref|YP_634375.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108463286|gb|ABF88471.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 538
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
V + L L IA L P + I+ HTD+ G + N +SQ+RAD ++ Y
Sbjct: 433 FPVGQSTLSDSERRNLDAIADYLKANPGVSLRIEGHTDNTGPEELNRTLSQDRADAVRQY 492
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
LIQ+ + ++ +G+ PI +NDT GR N+R+E
Sbjct: 493 LIQQ-GIESSRLTAKGYGPAQPIASNDTPEGRSANRRVEFV 532
>gi|5081411|gb|AAD39366.1|AF117971_1 outer membrane protein OprF [Pseudomonas stutzeri LMG 11199T]
Length = 328
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+++ + V F + + ++ ++ +A + ++P T ++ HTDS+GT
Sbjct: 208 EPEPAPEVVRVELDVKFDF-DKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSVGTD 266
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ N +S+ RA+ +++ L+ ++ G+ P+ N T+ GRQ N+R+E
Sbjct: 267 QYNQRLSERRAEAVRNVLVNEYGVQGNRVNSVGYGESRPVADNSTEEGRQINRRVE 322
>gi|256823578|ref|YP_003147541.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069]
gi|256797117|gb|ACV27773.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069]
Length = 377
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 11/165 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEF---QMQLQDT--GIVVSRIGDMITCYIPVH 79
+ V+ G LD D Q T G+ V G + V
Sbjct: 205 DANDQCPGTPAGAAVDAN-GCPLDSDNDGVYDYQDACPGTAPGVQVDEKGCEVKVAEEVV 263
Query: 80 V-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
V ++ ++ + + + +A L ++PS IQ HTDS+G+ N +S+ RA
Sbjct: 264 VDMRLNFDTNKYEVKPEMVAEIAKVAEFLRQYPSVNAEIQGHTDSVGSSAYNQGLSERRA 323
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ +K YL+ + +S +G+ + PI N T+ GR N+R E
Sbjct: 324 NSVKDYLVSNFGINASRLSAKGYGEEEPIADNSTEEGRALNRRAE 368
>gi|332294873|ref|YP_004436796.1| OmpA/MotB domain protein [Thermodesulfobium narugense DSM 14796]
gi|332177976|gb|AEE13665.1| OmpA/MotB domain protein [Thermodesulfobium narugense DSM 14796]
Length = 243
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 9/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-- 76
E D K +SL K + + L V + I
Sbjct: 74 SSVIGEPGSTTQSAPVVPDSALKAQEASL-KIAEILRQSLNPNQFSVIQTERGYLISILT 132
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQE 132
+ + L+ P+L IA +L K + ++ HTD++ +N +S
Sbjct: 133 DKILFDSGKANLKPDAFPLLTKIAAVLKKI-DNEVYVEGHTDNVPIHTVEFPSNWELSAA 191
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA + Y I++G+S +R + + G+A P+ +NDT GRQ N+RI+I I +
Sbjct: 192 RAASVAKYFIEQGISPSRLV-IAGYADTRPVASNDTPQGRQKNRRIDILITKK 243
>gi|290508935|ref|ZP_06548306.1| OmpA domain-containing protein [Klebsiella sp. 1_1_55]
gi|289778329|gb|EFD86326.1| OmpA domain-containing protein [Klebsiella sp. 1_1_55]
Length = 565
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 54/108 (50%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L+ +L + P +I + HTDSIG K+N +S +RA+ ++
Sbjct: 435 LFDTGKSTLKPGSTKLLVNSLLGIKAKPGWLIVVAGHTDSIGNDKSNQQLSLKRAEAVRD 494
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ G +V+G+ P+ +N+T GR N+R+EI + P+ +
Sbjct: 495 WMRDTGDVPESCFAVQGYGASRPVASNETPDGRAQNRRVEISLVPQKD 542
>gi|189475074|gb|ACE00211.1| OmpA [Vibrio alginolyticus]
Length = 330
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L + L + LN++P + I +TDS G N +S+ RA +
Sbjct: 218 FEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDSSGPAAYNQKLSERRAQSVAD- 276
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + ++V+G + P+ N T+ GR+ N+R+E+ +
Sbjct: 277 YLTAAGIGSDRLTVKGMGEENPVADNSTREGREKNRRVEVVV 318
>gi|146282405|ref|YP_001172558.1| outer membrane protein OprF precursor [Pseudomonas stutzeri A1501]
gi|145570610|gb|ABP79716.1| outer membrane protein OprF precursor [Pseudomonas stutzeri A1501]
Length = 315
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+++ + V F + + ++ ++ +A + ++P T ++ HTDS+GT
Sbjct: 193 EPEPAPEVVRVELDVKFDF-DKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSVGTD 251
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ N +S+ RA+ +++ L+ ++ G+ P+ N T+ GRQ N+R+E ++
Sbjct: 252 QYNQRLSERRAEAVRNVLVNEYGVQGNRVNSVGYGESRPVADNSTEEGRQINRRVEAEV 310
>gi|91224878|ref|ZP_01260138.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|91190424|gb|EAS76693.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
Length = 330
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L + L + LN++P + I +TDS G N +S+ RA +
Sbjct: 218 FEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDSSGPAAYNQKLSERRAQSVAD- 276
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + ++V+G + P+ N T+ GR+ N+R+E+ +
Sbjct: 277 YLTAAGIGSDRLTVKGMGEENPVADNSTREGREKNRRVEVVV 318
>gi|194334296|ref|YP_002016156.1| OmpA/MotB domain-containing protein [Prosthecochloris aestuarii DSM
271]
gi|194312114|gb|ACF46509.1| OmpA/MotB domain protein [Prosthecochloris aestuarii DSM 271]
Length = 229
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 4/173 (2%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + K L + G +D +E + G V R+G+ I
Sbjct: 51 GSQTGSWGKGALLGAVIGGAGGALIGDYMDAQAEEIDNSV--DGATVERVGEGIRVVFDS 108
Query: 79 HVSFVSEVFLEKKF-LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ F + +Q +A+ILNK+ T + I+ HTDS+GT +N +S+ RA+ +
Sbjct: 109 GLLFSTASSTLTSTSRYNIQKLASILNKYEDTNVVIEGHTDSVGTESSNQQLSENRAESV 168
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
S L++ IS G+ P+ +N+T G++ N+R+E+ I+ ++K+
Sbjct: 169 AS-LLRAYGVYGSRISTVGYGETRPVASNETAQGKKLNRRVEVLIYANDDLKQ 220
>gi|126176195|ref|YP_001052344.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|160877206|ref|YP_001556522.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|304412239|ref|ZP_07393848.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307306983|ref|ZP_07586723.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|125999400|gb|ABN63475.1| OmpA/MotB domain protein [Shewanella baltica OS155]
gi|160862728|gb|ABX51262.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|304349505|gb|EFM13914.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306910561|gb|EFN40991.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|315269410|gb|ADT96263.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 202
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 77/185 (41%), Gaps = 6/185 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L +T ++GC + R+ + + ++ + G + +A + Q
Sbjct: 1 MKTLTF-FLSVTLLAGCSM--RDTVNIDEMTTTQAYDLSDKDGDGVIEARERCNDTAQGA 57
Query: 62 GIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G G + + ++ ++ P ++ +A L ++P+T + I+ HT
Sbjct: 58 GTDNYGCGKIKAINERKEINILFPNDSAYIAPEYYPQIEEVAIFLRQYPTTKVTIEGHTS 117
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N ++SQ+RA+ + + L +R ++ G+ P+ T N+R+
Sbjct: 118 RTGTDERNAVLSQDRANAVTAVLAERFSIDRSRLTAIGYGSSRPVVLEQTPDAEIRNRRV 177
Query: 179 EIQIF 183
++
Sbjct: 178 VAEVT 182
>gi|153838879|ref|ZP_01991546.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|149747670|gb|EDM58584.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
Length = 205
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 72/197 (36%), Gaps = 11/197 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + + + + ++ C +S + + D D ++ + T
Sbjct: 1 MKNITI-IALSLVVAACSSSSERGDEYDYIDTPIADQWADHQDDDSDGVINQ-RDLCPGT 58
Query: 62 --GIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
G + G + + F ++ ++ L ++PST I +Q
Sbjct: 59 PLGAEIDNDGCGSYANSSQQMQIRVLFANDSDEINPVFAKQIRELSDFLKEYPSTSIELQ 118
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ G ++NL +S+ RA+ + + + + +++ G+ T +V
Sbjct: 119 GYASRTGGSEHNLDLSKRRAENV-RKALLQNGITPDRVTIVGYGDTVLATTGTDEVSHAL 177
Query: 175 NQRIEIQIFP-RGNIKK 190
N+R+ + +G +KK
Sbjct: 178 NRRVTATVVGHKGEVKK 194
>gi|197120112|ref|YP_002140539.1| chemotaxis protein MotB [Geobacter bemidjiensis Bem]
gi|197089472|gb|ACH40743.1| chemotaxis MotB protein [Geobacter bemidjiensis Bem]
Length = 254
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 56/145 (38%), Gaps = 6/145 (4%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPS 108
E + VS + + F L++ +L+ + + L+ + +
Sbjct: 108 IEAYLLKVGAQAKVSVSVTPRGLVVSLKEAGFFDSGSATLKQDSYALLKDVVSSLSSYSN 167
Query: 109 TVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I ++ HTD++ +N +S RA + YL ++ IS G+ P+
Sbjct: 168 G-IRVEGHTDNMPISSASFPSNWELSTARATNVLQYLTKQTDFDPYRISAAGYGEYRPVA 226
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNIK 189
N GR N+R++I + + +
Sbjct: 227 DNSDAEGRGKNRRVDIVLLSEQSER 251
>gi|330943087|gb|EGH45518.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Pseudomonas syringae pv. pisi str. 1704B]
Length = 344
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + +D N ++DK D + V G +
Sbjct: 178 GGSKKVEAAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVR 231
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ ++ +A + ++P T ++ HTDS+G N +S+ RA
Sbjct: 232 VELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTTTVEGHTDSVGPDAYNQKLSERRA 291
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +K L+ + ++ G+ P+ N T+ GR N+R+E ++ +
Sbjct: 292 NAVKQVLVNQYGVGASRVNSVGYGESRPVADNATEAGRAVNRRVEAEVEAQAK 344
>gi|261253627|ref|ZP_05946200.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
gi|260937018|gb|EEX93007.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
Length = 320
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ ++ L+ + +L + + ++P + I +TDS G + N ++S++RA
Sbjct: 207 VDSGNFALNSTELKPESKSLLSELVQFMEQYPQANVEITGYTDSSGAAEYNQMLSEKRAQ 266
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + L + + I+V G PI +NDT+ GR N+R+EI +
Sbjct: 267 AVANELESQ-GVESSRITVSGEGENNPIASNDTRGGRAQNRRVEITV 312
>gi|304398526|ref|ZP_07380399.1| OmpA/MotB domain protein [Pantoea sp. aB]
gi|304354031|gb|EFM18405.1| OmpA/MotB domain protein [Pantoea sp. aB]
Length = 570
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 52/117 (44%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I + + + L+ ML + P +I + HTD+ G + N +S
Sbjct: 431 KIVRLDSMSLFDSGKAVLKTGSTRMLVNSLVGIKAKPGWLIVVSGHTDNTGNPQLNQTLS 490
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
RA ++ ++ G +V+G+ P+ TNDT GR N+R+EI + P+ N
Sbjct: 491 LRRAAAVRDWMRDTGDVPESCFAVQGYGESRPVATNDTPAGRALNRRVEISLVPQAN 547
>gi|269959951|ref|ZP_06174328.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835250|gb|EEZ89332.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 326
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L L LN++P + I +TDS G N +S+ RA + Y
Sbjct: 214 FEFDSATLTDSVSERLDNFVNFLNEYPQAQVEITGYTDSSGPAAYNQKLSERRAQSVADY 273
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
LI G+ ++R +V+G + P+ N T GR+ N+R+E+ +
Sbjct: 274 LIAAGIDADR-FTVKGMGEENPVADNSTHEGREKNRRVEVVV 314
>gi|4580975|gb|AAD24562.1|AF117970_1 OprF [Pseudomonas viridiflava]
Length = 344
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 10/168 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + +D N ++DK D + V G +
Sbjct: 178 GGSKKVEAAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVR 231
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ ++ +A + ++P T ++ HTDS+G N +S+ RA
Sbjct: 232 VELDVKFDFDKSVVKPSSYGDIKNLADFMQQYPQTSTTVEGHTDSVGPDAYNQKLSERRA 291
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +K L+ + ++ G+ P+ N T+ GR N+R+E ++
Sbjct: 292 NAVKQVLVNQYGVGASRVNSVGYGESRPVADNATESGRAVNRRVEAEV 339
>gi|5081412|gb|AAD39367.1|AF117972_1 outer membrane protein OprF [Pseudomonas stutzeri A15]
Length = 321
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+++ + V F + + ++ ++ +A + ++P T ++ HTDS+GT
Sbjct: 206 EPEPAPEVVRVELDVKFDF-DKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSVGTD 264
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ N +S+ RA+ +++ L+ ++ G+ P+ N T+ GRQ N+R+E
Sbjct: 265 QYNQRLSERRAEAVRNVLVNEYGVQGNRVNSVGYGESRPVADNSTEEGRQINRRVE 320
>gi|327396585|dbj|BAK14006.1| putative OmpA-family membrane protein [Pantoea ananatis AJ13355]
Length = 353
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 51/109 (46%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L+ ML + P +I + HTD+ G + N +S +RA+ ++
Sbjct: 222 SLFDSGKSALKDGSTKMLVNSLVGIKAKPGWLIIVSGHTDNTGNPQLNQALSLKRAEAVR 281
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ G +V+G+ P+ N T GR N+R+EI + P+ N
Sbjct: 282 NWMRDTGGVPESCFAVQGYGESRPVAANGTPEGRALNRRVEISLVPQAN 330
>gi|300714997|ref|YP_003739800.1| outer membrane protein [Erwinia billingiae Eb661]
gi|299060833|emb|CAX57940.1| Outer membrane protein [Erwinia billingiae Eb661]
Length = 564
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 61/136 (44%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
D + + V++ I + + + L+ L ML + P +I
Sbjct: 406 DAIRSYIPPPAPSVAKDTPKIVRLDSLSLFDTGKAVLKPGSLKMLVTALVDIKARPGWLI 465
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ HTDS G + N +S RAD ++ +++ S +V+GF PI TNDT G
Sbjct: 466 VVAGHTDSTGNVLANQQLSLTRADALRDWMLSTSDVSPTCFAVQGFGASRPIATNDTPAG 525
Query: 172 RQNNQRIEIQIFPRGN 187
R N+R+EI + P+ +
Sbjct: 526 RALNRRVEISLVPQAD 541
>gi|95930003|ref|ZP_01312743.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
gi|95133972|gb|EAT15631.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
Length = 176
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 57/181 (31%), Gaps = 12/181 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH-KSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
K L L I+ +GC E + + + S D A E ++
Sbjct: 4 FKLLCLFALILILAAGCAKPVTEDTGTEEACEVTEVAPTTEPVPSYTDSAVTETTPAVEP 63
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
V + + L + L L P T + I+ H D
Sbjct: 64 VAAPV----------LGTVYFEFDQYTLSAEARDTLAENMRYLQANPGTTLVIEGHCDER 113
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ + NL + + RA + + + +S + + P+D T+ N+R E
Sbjct: 114 GSDEYNLALGERRAVAAQQ-YLTSMGVATDRLSTISYGEEKPVDMASTEEAWAKNRRAEF 172
Query: 181 Q 181
Sbjct: 173 V 173
>gi|153956379|ref|YP_001397144.1| hypothetical protein CKL_3788 [Clostridium kluyveri DSM 555]
gi|219856692|ref|YP_002473814.1| hypothetical protein CKR_3349 [Clostridium kluyveri NBRC 12016]
gi|146349237|gb|EDK35773.1| MotB [Clostridium kluyveri DSM 555]
gi|219570416|dbj|BAH08400.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 254
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 65/175 (37%), Gaps = 10/175 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD----TGIVVSRIGDMITC 74
G K + L + + E LQ+ + S +
Sbjct: 63 GSDDTSSIKETVDPEETQQTDTDDQEKKLSELKSEVDKYLQNSEMSGSVSTSINERGLIV 122
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
+ + F + ++ +F L I ILN+ + + I+ HTD+I +N +
Sbjct: 123 SMNDSLLFDTGKADIKPEFQQKLVEIGKILNQLGNY-MRIEGHTDNIPISNNQYSSNWKL 181
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA + +LI+ +S G+ P+ N T G+ N+R++I I
Sbjct: 182 SCDRASNVTEFLIKSAGIEPEKLSAIGYGEYRPVGDNSTDEGKAKNRRVDIVILN 236
>gi|332667773|ref|YP_004450561.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332336587|gb|AEE53688.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 603
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 64 VVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ + + V L +L +A ++N++P+ + IQ HTDS G
Sbjct: 481 ELRKEDQAVLLRAKKEVRFKTGSAILLPSSKKILDQVAALMNRYPAYKLDIQGHTDSQGK 540
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NL +S++RA YL+ R + + R I GF PI +N T GR N+R+E +
Sbjct: 541 EDFNLSLSKKRAKSCYDYLLLRSIDAKR-IEHEGFGETKPIASNKTPQGRVQNRRVEFVL 599
Query: 183 FPRGNIKK 190
++K+
Sbjct: 600 ----DVKQ 603
>gi|153006608|ref|YP_001380933.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152030181|gb|ABS27949.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 440
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 15/189 (7%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-SLDKAEDEFQMQLQDTGIVVSR 67
+ + ++GC + + K + G D D ++
Sbjct: 250 VAGIKALAGCPDSDSDGIPDAEDKCPQQAGTKENGGCPDADTDGDALADRIDKCPTQFGP 309
Query: 68 IGDMI------------TCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
D I V F + + + P+L + +L FP+ I+I+
Sbjct: 310 RPDGCPKKYTLVQVRREKIDIKQQVHFATAKFRVLPDSFPLLNQVVQVLRDFPNMQISIE 369
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTDS+G N+ +SQ+RA+ + YLI +GVS R + GF PI +N T GR
Sbjct: 370 GHTDSVGGEALNMRLSQQRAEAVLDYLISKGVSPER-LEAIGFGPTKPIASNKTASGRAR 428
Query: 175 NQRIEIQIF 183
N+R E +I
Sbjct: 429 NRRTEFRIV 437
>gi|116878566|ref|YP_357384.2| chemotaxis protein MotB [Pelobacter carbinolicus DSM 2380]
gi|114843202|gb|ABA89214.2| chemotaxis protein MotB [Pelobacter carbinolicus DSM 2380]
Length = 299
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 8/148 (5%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
D D+ + +++ + +S + +T + + F + ++ L +L+ I TIL
Sbjct: 148 DDLVDKLESEIKRGEVTISDLQGRLTVNMVEKILFDSGKADIKPAGLNILKRIGTILKNT 207
Query: 107 PSTVIAIQSHTDSIGT-------LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
I ++ HTD++ ++N +S RA + +L R S +SV GF
Sbjct: 208 ADKSIRVEGHTDNVPISPRLKDIYRSNWELSTARAGSVVHFLQDRLGISGERLSVCGFGP 267
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
PI +N T GR N+RI+I + P+
Sbjct: 268 YMPIASNATAQGRAQNRRIQIVLVPQQT 295
>gi|19704459|ref|NP_604021.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19714725|gb|AAL95320.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 315
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 82/172 (47%), Gaps = 8/172 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM-----QLQDTGIVVSRIGDM 71
G G + ++K++ + + G +++ + +L+ V S +
Sbjct: 143 GSGTYNDKEKELLIENDGKGKAIITLKGKTIEVEAKPLEKPEKFPKLKMVPPVPSIEANS 202
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ + + F + + + +L+ + +L + I HTDS + ++N ++S
Sbjct: 203 LLITLDSGILFDVDKYDVRPEAEEVLKNLVIVLKEADIKAFEIDGHTDSDASDEHNQVLS 262
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ RA+ +K++L +G+ + I+++G+ PI +NDT G+Q N+R+EI I
Sbjct: 263 ENRANAVKNFLTSQGIMAE--ITIKGYGESRPIASNDTPEGKQKNRRVEIVI 312
>gi|328946962|ref|YP_004364299.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
gi|328447286|gb|AEB13002.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
Length = 488
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 63/164 (38%), Gaps = 1/164 (0%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + + S + ++ + ++V I +
Sbjct: 325 AKNENQTYGAKNHPQKKKDSADEIQSKISAGKNSSSNSKSEKKVIVENTAAGIRLTMQNL 384
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
L L IA +L + P + ++ HT S+G K + +S ERA+ + +
Sbjct: 385 NFKPDSSELLPGENERLDQIAQVLKEVPDQMFLVEGHTASVGYEKGEMKLSVERANSVAN 444
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
LIQRG+ +FI +G PI N T G+ N+R+EI I
Sbjct: 445 ALIQRGIPREKFI-CKGSGGTKPIADNSTPEGKAKNRRVEITIL 487
>gi|327397929|gb|AEA73286.1| MopB [Stenotrophomonas maltophilia]
Length = 363
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 6/151 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
G ++ +D+ I ++ + + L + +L
Sbjct: 211 ADLDDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSNLRPDAVAILS 270
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IL ++P + + HTDS GT N +S+ RA + +YL + GV + R + G+
Sbjct: 271 EATEILKRYPDLRVEVAGHTDSKGTDAYNQKLSERRATAVYNYLTKNGVDAGRLVGPIGY 330
Query: 158 AYKYPIDTN------DTKVGRQNNQRIEIQI 182
PI N D GR N+R E+ +
Sbjct: 331 GESRPIAPNTNPDGSDNPEGRAKNRRTELNV 361
>gi|313500273|gb|ADR61639.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 263
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 72/166 (43%), Gaps = 6/166 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYI 76
+ ++ +V +S ++A+ + + + +
Sbjct: 82 TNQRVEVAKQTIALRTAEADLKNASAERAKAKLDARDAQIAKLQDSLNAKQTDRGTLVTF 141
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ L+ P + +A L + P + ++ +TDS+G+ N +S+ RA+
Sbjct: 142 GDVLFDFNKAELKSNAYPNVTKLAQFLQENPERKVIVEGYTDSVGSANYNQTLSERRANS 201
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ L++ GV R +S +G+ +YP+ N + GR N+R+E+ I
Sbjct: 202 VRMALVRAGVDPARIVS-QGYGKEYPVADNSSNSGRAQNRRVEVTI 246
>gi|254227754|ref|ZP_04921185.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262395797|ref|YP_003287650.1| outer membrane protein A precursor [Vibrio sp. Ex25]
gi|151939796|gb|EDN58623.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262339391|gb|ACY53185.1| outer membrane protein A precursor [Vibrio sp. Ex25]
Length = 330
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L + L + LN++P + I +TDS G N +S+ RA +
Sbjct: 218 FEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDSSGPATYNQKLSERRAQSVAD- 276
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + ++V+G + P+ N T+ GR+ N+R+E+ +
Sbjct: 277 YLTAAGIDSDRLTVKGMGEENPVADNSTREGREKNRRVEVVV 318
>gi|212283809|gb|ACJ23322.1| outer membrane protein OmpA [Vibrio parahaemolyticus]
Length = 301
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L + L + LN++P + I +TDS G N +S+ RA +
Sbjct: 190 FEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDSSGPAAYNQKLSERRAQAVAD- 248
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I ++V+G + P+ N T+ GR+ N+R+E+ +
Sbjct: 249 YITGAGIDADRLTVKGMGEENPVADNSTREGREKNRRVEVVV 290
>gi|124514812|gb|EAY56324.1| putative OmpA family protein [Leptospirillum rubarum]
Length = 265
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 69/161 (42%), Gaps = 3/161 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT--GIVVSRIGDMITCYIPVHVS 81
E+K+ + + + +A L+ + + + +
Sbjct: 95 EQKEKAAELQKEIKKASAHRDQIMLEANQAKIEHLKRELLKMKAKETNRGLVLTLGNVLF 154
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+++ L+ + ++ +A + P + I+ +TDS GT N +S +RA+ ++
Sbjct: 155 DLNKADLKPGGMRTIKKLAEFMQSDPKRNVMIEGYTDSTGTAAYNEKLSLKRAESVRD-A 213
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + I +G+ KYPI +N T GRQ N+R+EI I
Sbjct: 214 LVNDGINPQRIVTKGYGPKYPIASNKTADGRQQNRRVEIVI 254
>gi|28901041|ref|NP_800696.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
gi|153837129|ref|ZP_01989796.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|260362470|ref|ZP_05775403.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
gi|260879890|ref|ZP_05892245.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|260894565|ref|ZP_05903061.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|260900439|ref|ZP_05908834.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|28809554|dbj|BAC62529.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
gi|149749546|gb|EDM60292.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|308086367|gb|EFO36062.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|308092443|gb|EFO42138.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|308107064|gb|EFO44604.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|308113361|gb|EFO50901.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
Length = 329
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L + L + LN++P + I +TDS G N +S+ RA +
Sbjct: 218 FEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDSSGPAAYNQKLSERRAQAVAD- 276
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I ++V+G + P+ N T+ GR+ N+R+E+ +
Sbjct: 277 YITGAGIDADRLTVKGMGEENPVADNSTREGREKNRRVEVVV 318
>gi|328953892|ref|YP_004371226.1| peptidoglycan-associated lipoprotein [Desulfobacca acetoxidans DSM
11109]
gi|328454216|gb|AEB10045.1| peptidoglycan-associated lipoprotein [Desulfobacca acetoxidans DSM
11109]
Length = 191
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 66/193 (34%), Gaps = 19/193 (9%)
Query: 1 MIKE------LGLSMFIMTTISGCG-----LASREKKKVFLHKSNDTDIVNKRFGSSLDK 49
M++ L L + ++GC + + + + G L +
Sbjct: 1 MMRSGRIAWVLLLCLIPALMLTGCAKKKVVTTAGPDETTTEPGQIQEESLGAG-GERLGR 59
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ + Q G + I + L + +LQ A+ L K P
Sbjct: 60 SRKGVSARAQAYG------PEGIAFESEDVFFEYDQFTLTSESRSLLQKKASFLQKHPEI 113
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I I+ H D G+ NL + Q+RAD +Q + +S + + P+ DT+
Sbjct: 114 QITIEGHCDIRGSSDYNLGLGQKRADSA-KSYLQDLGIAGNRLSTISYGKEQPVAHGDTE 172
Query: 170 VGRQNNQRIEIQI 182
N+R + I
Sbjct: 173 EAHARNRRGHLVI 185
>gi|4580968|gb|AAD24555.1|AF117963_1 OprF [Pseudomonas cichorii]
Length = 346
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 64/175 (36%), Gaps = 10/175 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G + +D N ++DK + + V G +
Sbjct: 178 GGSKKTEAAPVAAPVAEVCSDSDNDGVCDNVDKCPN------TPANVTVDADGCPAVAEV 231
Query: 77 P----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ ++ +A + ++P T ++ HTDS+G N +S+
Sbjct: 232 VRVELDVKFDFDKAVVKPNSYGDIKNLADFMQQYPQTTTTVEGHTDSVGPDAYNQKLSER 291
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
RA +K L+ + ++ G+ P+ N T+ GR N+R+E ++ +
Sbjct: 292 RASAVKQVLVNQYGVGANRVNSVGYGETRPVADNATEAGRAVNRRVEAEVEAQAK 346
>gi|26988234|ref|NP_743659.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|24982975|gb|AAN67123.1|AE016341_6 OmpA family protein [Pseudomonas putida KT2440]
Length = 263
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
N + + + D + Q L + + ++ L+
Sbjct: 104 NASAQRAQAKLDARDAQIAKLQDSLNA-----KQTDRGTLVTFGDVLFDFNKAELKSNAY 158
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
P + +A L + P + ++ +TDS+G+ N +S+ RA+ ++ L++ GV R +S
Sbjct: 159 PNITKLAQFLQENPERKVIVEGYTDSVGSANYNQTLSERRANSVRMALVRAGVDPARIVS 218
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+G+ +YP+ N + GR N+R+E+ I
Sbjct: 219 -QGYGKEYPVADNSSNSGRAQNRRVEVTI 246
>gi|21241777|ref|NP_641359.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306]
gi|294627877|ref|ZP_06706456.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294666871|ref|ZP_06732103.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|21107151|gb|AAM35895.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306]
gi|292597791|gb|EFF41949.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292603388|gb|EFF46807.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 365
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
G ++ +D+ I ++ + ++ L + +L
Sbjct: 216 DDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAVSILSEAT 275
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
IL ++P + + HTDS GT N +S+ RA + YL + GV ++R + G+
Sbjct: 276 EILKRYPDLKVEVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGES 335
Query: 161 YPIDTN------DTKVGRQNNQRIEIQI 182
PI N D GR N+R E+ +
Sbjct: 336 RPIAPNTNPDGSDNPEGRAKNRRTELNV 363
>gi|78046598|ref|YP_362773.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325925345|ref|ZP_08186747.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas perforans 91-118]
gi|78035028|emb|CAJ22673.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325544223|gb|EGD15604.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas perforans 91-118]
Length = 365
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
G ++ +D+ I ++ + ++ L + +L
Sbjct: 216 DDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAVSILSEAT 275
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
IL ++P + + HTDS GT N +S+ RA + YL + GV ++R + G+
Sbjct: 276 EILKRYPDLKVEVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGES 335
Query: 161 YPIDTN------DTKVGRQNNQRIEIQI 182
PI N D GR N+R E+ +
Sbjct: 336 RPIAPNTNPDGSDNPEGRAKNRRTELNV 363
>gi|327480138|gb|AEA83448.1| outer membrane protein [Pseudomonas stutzeri DSM 4166]
Length = 200
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 67/200 (33%), Gaps = 26/200 (13%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-------------------------S 45
+ T ++GC ++ T
Sbjct: 1 MTTFLAGCAGVQKQDWPTCAAVGGVTGAALGAIESSTYAGWGALIGGGVAAAYCWANGME 60
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
A E + T + + V F +++ +Q +A + +
Sbjct: 61 EETVAVVETVEPMPQTQPEPEPAAAPVRVELDVKFDF-DRDVVKQDSYSDIQNLADFMKE 119
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+ T ++ HTDS+GT N +S+ RA+ ++ L+ ++ G+ P+
Sbjct: 120 YRQTTTVLEGHTDSVGTDAYNQRLSERRANAVRRVLVDELGVEGNRVNAVGYGESRPVAD 179
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
N T+ GR N+R+E ++ R
Sbjct: 180 NSTEEGRAINRRVEAEVEAR 199
>gi|119774051|ref|YP_926791.1| OmpA/MotB [Shewanella amazonensis SB2B]
gi|119766551|gb|ABL99121.1| OmpA/MotB [Shewanella amazonensis SB2B]
Length = 368
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 61/153 (39%), Gaps = 2/153 (1%)
Query: 37 DIVNKRFGSSLDKAEDEFQM-QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
D N LDK ++ G V + D+ T + + +
Sbjct: 213 DSDNDGVNDDLDKCPATPADHKVDAYGCTVYKD-DVTTHNLGSLRFANNSSVINPSSYES 271
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
++ +A +N+ P + + I H ++G N+ +S++RA+ L+++ S ++ +
Sbjct: 272 VEKLANYMNQHPGSTVEIGGHASNVGNPDYNMTLSEKRANAAAKLLVEKYGISANRVTAK 331
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
G+ P+ +T N+R+E + +
Sbjct: 332 GYGITRPVMDGNTAEAHAANRRVEAVVTGSEKV 364
>gi|291619700|ref|YP_003522442.1| Hypothetical Protein PANA_4147 [Pantoea ananatis LMG 20103]
gi|291154730|gb|ADD79314.1| Hypothetical Protein PANA_4147 [Pantoea ananatis LMG 20103]
Length = 595
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 53/117 (45%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I + + + L+ ML + P +I + HTD+ G + N +S
Sbjct: 456 KIVRLDSMSLFDSGKSALKDGSTKMLVNSLVGIKAKPGWLIIVSGHTDNTGNPQLNQALS 515
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+RA+ +++++ G +V+G+ P+ N T GR N+R+EI + P+ N
Sbjct: 516 LKRAEAVRNWMRDTGGVPESCFAVQGYGESRPVAANGTPEGRALNRRVEISLVPQAN 572
>gi|641920|gb|AAA85840.1| protein F precursor [Pseudomonas fluorescens]
Length = 317
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P+T + + HTDS+G N +SQ RAD +
Sbjct: 215 DVKFDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLSQRRADAV 274
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
K ++ + + I+ G+ P+ N T+ GR N+R+E
Sbjct: 275 KQ-VLVKDGVAPSRITAVGYGESRPVADNATEAGRAVNRRVE 315
>gi|296328184|ref|ZP_06870715.1| outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296154696|gb|EFG95482.1| outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 394
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM-----QLQDTGIVVSRIGDM 71
G G + + K++ + + G +++ + +L+ V S +
Sbjct: 222 GSGTYNDKDKELLIENDGKGKAIITLKGKTIEVEAKPLEKPEKFPKLKMVPPVPSIEANS 281
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ + + F + + + +L+ + +L + I HTDS + ++N ++S
Sbjct: 282 LLITLDSGILFDVDKYDVRPEAEEVLKNLVIVLKEADIKAFEIDGHTDSDASDEHNQVLS 341
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ RA+ +K++L +G+ + I+++G+ PI +NDT G+Q N+R+EI I
Sbjct: 342 ENRANAVKNFLTSQGIMAE--ITIKGYGESRPIASNDTPEGKQKNRRVEIVI 391
>gi|77458004|ref|YP_347509.1| OmpF [Pseudomonas fluorescens Pf0-1]
gi|77382007|gb|ABA73520.1| outer membrane fibronectin-binding protein [Pseudomonas fluorescens
Pf0-1]
Length = 344
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 55/131 (41%), Gaps = 4/131 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 214 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGH 273
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS+G N +S+ RA+ +K L + + + G+ P+ N T+ GR N+
Sbjct: 274 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSIGYGESRPVADNKTEAGRAVNR 333
Query: 177 RIEIQIFPRGN 187
R+E Q+ +
Sbjct: 334 RVEAQVEAQAK 344
>gi|328470939|gb|EGF41850.1| outer membrane protein OmpA [Vibrio parahaemolyticus 10329]
Length = 329
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L + L + LN++P + I +TDS G N +S+ RA +
Sbjct: 218 FEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDSSGPAAYNQKLSERRAQAVAD- 276
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I ++V+G + P+ N T+ GR+ N+R+E+ +
Sbjct: 277 YITSAGIDADRLTVKGMGEENPVADNSTREGREKNRRVEVVV 318
>gi|264677754|ref|YP_003277660.1| OmpA/MotB [Comamonas testosteroni CNB-2]
gi|299529322|ref|ZP_07042761.1| OmpA/MotB [Comamonas testosteroni S44]
gi|262208266|gb|ACY32364.1| OmpA/MotB [Comamonas testosteroni CNB-2]
gi|298722700|gb|EFI63618.1| OmpA/MotB [Comamonas testosteroni S44]
Length = 175
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 67/179 (37%), Gaps = 10/179 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK L L++ + ++GC + K D + ++ G+S + L +
Sbjct: 4 IKRLSLALAVTALVAGCSSGVKLDDKPV-----DGSLSSQGAGTSGQGQSGVSGVDLTGS 58
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + ++ P ++ A + P+ + ++ HTD G
Sbjct: 59 AASKAGPQGVSRI----VYFDFDSYSVKADAQPQIEAHAKFIKANPAAKVQLEGHTDERG 114
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL + Q+RA+ ++ + ++ + + + P ++ N+R+EI
Sbjct: 115 GREYNLALGQKRAEAVRR-SLGLLGVNDAQVEAVSYGKEKPAAEGHSEDAYAQNRRVEI 172
>gi|146307120|ref|YP_001187585.1| OmpF family protein [Pseudomonas mendocina ymp]
gi|145575321|gb|ABP84853.1| OmpF family protein [Pseudomonas mendocina ymp]
Length = 327
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++++ ++ +A +N++P T ++ HTDS+G+ N +S+ RA+ +
Sbjct: 217 DVKFDFDKDRVKEESYGDIKNLADFMNQYPQTTTTVEGHTDSVGSDAYNQGLSERRANAV 276
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
++ L+ + ++ G+ P+ N T GR N+R+E ++ IK+
Sbjct: 277 RNVLVNQYGVDGNRVNAVGYGETRPVADNATDSGRAINRRVEAEV--EAQIKQ 327
>gi|78221995|ref|YP_383742.1| OmpA/MotB [Geobacter metallireducens GS-15]
gi|78193250|gb|ABB31017.1| OmpA/MotB [Geobacter metallireducens GS-15]
Length = 457
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 55/102 (53%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + + ++ ++ +A + ++P+T I+ +TD +G+ N+ +SQ RA+ + +
Sbjct: 223 FDIDKADIRPQYKDEVKRVADYMKQYPNTTAVIEGYTDDVGSDDYNMKLSQRRAEAVVNS 282
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ +S +G+ P+ +N T+ G+Q N+RI+ I
Sbjct: 283 LVDDFGIDRSRLSAKGYGKTQPLTSNATEAGKQKNRRIQAVI 324
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
G ++ + V++++ D + + + + ++ ++ + +
Sbjct: 309 ATEAGKQKNRRIQAVIDCTLEDPKVIAKLPDRLCVSLNIQ-FDTDKYTIKPQYHDEIAKV 367
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ + P+T I+ HTD +G+ N+ +S RA+ + +YL + +S +G+ Y
Sbjct: 368 GEFMKQNPTTTAVIEGHTDRVGSYDYNMKLSLRRAESVVTYLADKFGIERSRLSAKGYGY 427
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
PI N GR N+RI I
Sbjct: 428 TRPIGYNSDPKGRAMNRRINAII 450
>gi|188586029|ref|YP_001917574.1| OmpA/MotB domain protein [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350716|gb|ACB84986.1| OmpA/MotB domain protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 269
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 66/173 (38%), Gaps = 9/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLD---KAEDEFQMQLQDTGIVVSRIGDMITCY 75
RE + L + ++ + ++ D + ED + +++ I
Sbjct: 72 AQIPREDPNITLPEPSERQVPSEEEQMMEDIYDQLEDYIEDADLAEVVMLETEERGIVIR 131
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLIS 130
+ F L + L +L IA IL + P+ I ++ TD + N +S
Sbjct: 132 FQDKILFDSGRAELRSESLEILGDIAEILEEIPN-EIKVEGFTDDVPIDTPEFPSNWELS 190
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + YL + G + G+ P+ ND+ RQ N+R++I +
Sbjct: 191 AARATTVLRYLSEEGGLDPGRLQATGYGEYRPMVPNDSPENRQLNRRVDITVL 243
>gi|154147928|ref|YP_001407122.1| outer membrane fibronectin-binding protein [Campylobacter hominis
ATCC BAA-381]
gi|153803937|gb|ABS50944.1| outer membrane fibronectin-binding protein [Campylobacter hominis
ATCC BAA-381]
Length = 333
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 7/158 (4%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYIPVHVSF 82
+ + V S +D D + G+VV G + + V+F
Sbjct: 172 AADFGARNPAPVAAEPASCVDSDNDGVCDNVDKCPGTPAGVVVDEFGCEKVIRLDLGVNF 231
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ K+ L+ +++I+ + + ++ +TDSIG N +S+ RA+ +
Sbjct: 232 AFDSAEISPKYYSELEKVSSIMKEHAEYSVRLEGNTDSIGKEAYNQKLSERRANAVSK-A 290
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ + I+ G K P+ TNDT GR N+R++
Sbjct: 291 LVKLGVPAEKITTVGLGEKNPVATNDTAEGRAQNRRVD 328
>gi|254519159|ref|ZP_05131215.1| OmpA/MotB domain-containing protein [Clostridium sp. 7_2_43FAA]
gi|226912908|gb|EEH98109.1| OmpA/MotB domain-containing protein [Clostridium sp. 7_2_43FAA]
Length = 242
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 76/213 (35%), Gaps = 33/213 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLH------------KSNDTDIVNKRFGSSLDKAED 52
L +F + S + + K++ S + + L
Sbjct: 23 TLLMIFFVVLYSASSVNESKYKQLATSMGDVFIGGYSVLGSAENSGSSSDEQGELKPLVQ 82
Query: 53 EFQMQLQD---------------TGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPML 96
+ +LQ + S + +V F S + ++++ P L
Sbjct: 83 TEEEKLQGIESQVNDIVKDLELEGSVTTSIEERGLIISFTDNVFFDSAKADIKEELKPKL 142
Query: 97 QLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
++ ILNK + + ++ HTD++ +N +S RA + +LI G S +
Sbjct: 143 ISVSNILNKIDNY-VRVEGHTDNLPISTSDYHSNWQLSSVRASNVVEFLISYGSISPSRL 201
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
S G+ P+ N + GR N+R++I I
Sbjct: 202 SAVGYGEYRPVADNTAEEGRAKNRRVDILILNN 234
>gi|239818113|ref|YP_002947023.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
gi|239804690|gb|ACS21757.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
Length = 187
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 6/188 (3%)
Query: 2 IKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+++L +S ++GC S + N + + L + E + +
Sbjct: 1 MRKLVVSGAAAAALFVAGCASQSPAPGSAAAPAAQAAAPANS-WTARLAALKTELESSTK 59
Query: 60 DTGIVVSRIGDMIT--CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
TG+V+ + D V +++ +L +A L + + + HT
Sbjct: 60 GTGVVIEQTADNQLHLVVPNELSFDVGRANVKRNLAQVLDKVAEGLRSAAAASVRVVGHT 119
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G+ + N +S RAD ++++L+ R S I+ G + PI N T GR N+R
Sbjct: 120 DNTGSEEGNERLSVSRADSVRNHLVSR-GVSTTAITTDGRGSREPIADNATPAGRAQNRR 178
Query: 178 IEIQIFPR 185
+EI + +
Sbjct: 179 VEIFVAEK 186
>gi|213962352|ref|ZP_03390615.1| outer membrane protein OmpA family P60 [Capnocytophaga sputigena
Capno]
gi|213955018|gb|EEB66337.1| outer membrane protein OmpA family P60 [Capnocytophaga sputigena
Capno]
Length = 360
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
R+ I Y + + ++ + +L IA I+N+ P ++ HTD+ GT ++
Sbjct: 240 QRVVKQINLYAKTILFDTDKSVVKPQAEFILDNIAIIMNENPDFNFVVEGHTDNTGTPEH 299
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
NL +SQ+RAD IK + R S + + +G+ PI++NDT+ G++ N+R+EI +
Sbjct: 300 NLKLSQDRADAIKQ-YLSRHGVSKKRLEAKGYGQTRPIESNDTERGKEINRRVEINVI 356
>gi|302185648|ref|ZP_07262321.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Pseudomonas syringae pv. syringae 642]
Length = 344
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + +D N ++DK D + V G +
Sbjct: 178 GGSKKVEAAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVR 231
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ ++ +A + ++P T ++ HTDS+G N +S+ RA
Sbjct: 232 VELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTTTVEGHTDSVGPDAYNQKLSERRA 291
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +K L+ + ++ G+ P+ N T+ GR N+R+E ++ +
Sbjct: 292 NAVKQVLVNQYGVGASRVNSVGYGETKPVADNATEAGRAVNRRVEAEVEAQAK 344
>gi|163786823|ref|ZP_02181271.1| peptidoglycan-associated lipoprotein [Flavobacteriales bacterium
ALC-1]
gi|159878683|gb|EDP72739.1| peptidoglycan-associated lipoprotein [Flavobacteriales bacterium
ALC-1]
Length = 367
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 6/146 (4%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
I N S K + ++++ I V+ + + L L
Sbjct: 226 IDNVSIESVEKKEMKPIKEKIEEPEIKVNE-----VYTFKNVLFDFDKSELLDVSKGELN 280
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ L + + I HTD++G N +S++RA + YLI +G+ +R I GF
Sbjct: 281 QLYKHLKENKDLKVKIFGHTDNVGLEARNKELSKQRAKAVVDYLISQGLDVSR-IQFIGF 339
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIF 183
PI NDT GRQ N+R+E ++
Sbjct: 340 GSSKPISDNDTDEGRQLNRRVEFKLT 365
>gi|313674928|ref|YP_004052924.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312941626|gb|ADR20816.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 679
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T I + L++ P L + ++++ P I I HTDS G+ NL++S+
Sbjct: 568 TVIIDNIYFNFDKTTLKEASFPELDRLTDLMSQNPGIKIEIIGHTDSKGSDDYNLILSEG 627
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA + YL+++ + ++ +G PI +N+T GR N+R+E I +
Sbjct: 628 RAQAVMEYLLEK-GIAQNRMTFKGLGETAPISSNNTDEGRAENRRVEFTIVAK 679
>gi|206602390|gb|EDZ38871.1| Putative OmpA family protein [Leptospirillum sp. Group II '5-way
CG']
Length = 265
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT--GIVVSRIGDMITCYIPVHVS 81
E+K+ + + + +A +L+ + + + +
Sbjct: 95 EQKEKAAELQKEIKKASAHRDQIMLEANQAKIERLKRELLKMKAKETNRGLVLTLGNVLF 154
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+++ L+ + ++ +A + P + I+ +TDS GT N +S +RA+ ++
Sbjct: 155 DLNKADLKPGGMRTIKKLAEFMQSDPKRNVMIEGYTDSTGTAAYNEKLSLKRAESVRD-A 213
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + I +G+ KYPI +N T GRQ N+R+EI I
Sbjct: 214 LVNDGINPQRIVTKGYGPKYPIASNKTADGRQQNRRVEIVI 254
>gi|39998119|ref|NP_954070.1| chemotaxis MotB protein [Geobacter sulfurreducens PCA]
gi|39985064|gb|AAR36420.1| chemotaxis MotB protein [Geobacter sulfurreducens PCA]
Length = 266
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 6/152 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
K F + E Q + V + + F +++ P+L
Sbjct: 104 ATEKDFQAIKSSIEAYLIKQGAQDKVNVGINRRGLVVSLKEAGFFDSGSAIVKESAYPLL 163
Query: 97 QLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+A L+ + + + ++ HTD++ +N +S RA I +L + I
Sbjct: 164 AKVAESLSAYSN-PVRVEGHTDTMPISSVQFPSNWELSTARATNIVHFLTRSYDFDPGAI 222
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S GF PI N+T GR N+R++I +
Sbjct: 223 SAAGFGEYRPIADNNTAEGRSKNRRVDIVLLS 254
>gi|302337004|ref|YP_003802210.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301634189|gb|ADK79616.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 405
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 34 NDTDIVNKRFGSSLDK--AEDEFQMQLQDTGIV---VSRIGDMITCYIPVHVSFVSEVFL 88
T + S+DK +DE + ++ + GI V D + +
Sbjct: 249 TGTATARQVRSRSMDKETVKDELERRIAENGIPDAGVRVGDDGVIISLENIQFKADSAVP 308
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ L+ + ++L +P I + HT GT + + +S ERA + ++L
Sbjct: 309 LPGEMDKLKRVVSLLKLYPDRDILVTGHTALAGTAEGRMALSLERARTVAAFLKDELNID 368
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + + G P+ NDT+ G++ N+R+EI I
Sbjct: 369 DDRLMIEGKGAGAPVAPNDTEEGKRKNRRVEITILEN 405
>gi|258621036|ref|ZP_05716070.1| outer membrane protein OmpA [Vibrio mimicus VM573]
gi|262166295|ref|ZP_06034032.1| outer membrane protein A precursor [Vibrio mimicus VM223]
gi|258586424|gb|EEW11139.1| outer membrane protein OmpA [Vibrio mimicus VM573]
gi|262026011|gb|EEY44679.1| outer membrane protein A precursor [Vibrio mimicus VM223]
Length = 322
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 2/144 (1%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY-IPVHVSFVSEVFLEKKFLPMLQL 98
+++++ E ++ + + T + + L+ L
Sbjct: 171 GSEAPAAVEQRPAEPAPVAEEPVVEKVAVTKTFTFQHLDSGTFANNSAELKPSMETKLDK 230
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ LN++P + + HTDS G+ N +S++RA + L +GV + R I+ +G
Sbjct: 231 LVGYLNQYPQAKVEVVGHTDSNGSEAYNQKLSEKRAQAVAKALEAQGVDAAR-ITAKGQG 289
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
PI +N T GR+ N+R+E+ I
Sbjct: 290 ESNPIASNATAEGREKNRRVELVI 313
>gi|262404553|ref|ZP_06081108.1| outer membrane protein A precursor [Vibrio sp. RC586]
gi|262349585|gb|EEY98723.1| outer membrane protein A precursor [Vibrio sp. RC586]
Length = 321
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 1/143 (0%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ + + + V+ ++ + L+ L +
Sbjct: 171 GSEEPAPVVEQRPAEPAPVAAPVEKVAVTKTFTFQHLDSGTFANNSAQLKPAMESKLDKL 230
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
L ++P + + HTDS G+ N +S++RA + ++ I+ +G
Sbjct: 231 VGYLKQYPQATVEVVGHTDSTGSDAYNQKLSEKRAQAVAK-ALEAQGIEASRITAKGQGE 289
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
PI +N T GR+ N+R+E+ I
Sbjct: 290 SNPIASNATAEGREKNRRVELVI 312
>gi|154174678|ref|YP_001407584.1| outer membrane fibronectin-binding protein [Campylobacter curvus
525.92]
gi|112803800|gb|EAU01144.1| outer membrane fibronectin-binding protein [Campylobacter curvus
525.92]
Length = 337
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Query: 61 TGIVVSRIGDM--ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G+VV G I + + ++ +A + + P + + HTD
Sbjct: 213 AGVVVDETGCEKVIVLRDLDVNFAFDSYKVGPGYAAEIKKVADFMGEHPEYRVVLAGHTD 272
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S+G N +S++RA + +++ + IS G+ PI TN TK GR N+R+
Sbjct: 273 SVGKEAYNQKLSEKRAKAVAE-VLEGYGVEKKKISTIGYGELRPIATNSTKEGRAQNRRV 331
Query: 179 E 179
E
Sbjct: 332 E 332
>gi|310659033|ref|YP_003936754.1| motility protein b [Clostridium sticklandii DSM 519]
gi|308825811|emb|CBH21849.1| motility protein B [Clostridium sticklandii]
Length = 216
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 65/158 (41%), Gaps = 7/158 (4%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKK 91
++ + + F D ++ + V + ++ F L+ +
Sbjct: 47 TSSEVLEMQNFQKLEDTIQEYLDKNQLSESVTVLEEEAGLLLRFQDNILFDSGSADLKPE 106
Query: 92 FLPMLQLIATILN--KFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRG 145
L ++ IA +LN F I+I+ HTD + +N +S R+ + +L++
Sbjct: 107 SLEIMSYIAQLLNAEDFKDKFISIEGHTDDVPMNSPRYPSNWELSVGRSSNVVRFLVENN 166
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ IS G++ +P+ NDT R N+R++I I
Sbjct: 167 NMDPKRISASGYSEYHPVAQNDTAENRAKNRRVDILIL 204
>gi|289673277|ref|ZP_06494167.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Pseudomonas syringae pv. syringae FF5]
gi|330977632|gb|EGH77539.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 344
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + +D N ++DK D + V G +
Sbjct: 178 GGSKKVEAAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVR 231
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ ++ +A + ++P T ++ HTDS+G N +S+ RA
Sbjct: 232 VELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTTTVEGHTDSVGPDAYNQKLSERRA 291
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +K L+ + ++ G+ P+ N T+ GR N+R+E ++ +
Sbjct: 292 NAVKQVLVNQYGVGASRVNSVGYGESKPVADNATEAGRAVNRRVEAEVEAQAK 344
>gi|261418451|ref|YP_003252133.1| flagellar motor protein MotB [Geobacillus sp. Y412MC61]
gi|319767588|ref|YP_004133089.1| OmpA/MotB domain protein [Geobacillus sp. Y412MC52]
gi|261374908|gb|ACX77651.1| OmpA/MotB domain protein [Geobacillus sp. Y412MC61]
gi|317112454|gb|ADU94946.1| OmpA/MotB domain protein [Geobacillus sp. Y412MC52]
Length = 259
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 68/178 (38%), Gaps = 9/178 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD----TGIVVSRIGDMITCY 75
+ ++ + VN + L + + + + D + S + +
Sbjct: 74 TPPAQDEEGRHQAKQPSPAVNGKEKEELGQIKAKIDSYIHDNKLTGKLQTSLTDEGLAIT 133
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLIS 130
I + F + K + I+ +L P I I HTD++ +N +S
Sbjct: 134 ILDDILFDSGSAEVRMKDRRLAAEISALLVMNPPRNIIISGHTDNVPIHNEKFASNWELS 193
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
RA L++ R+ S +G+ PI +N T GR N+R+EI I PR ++
Sbjct: 194 VMRAVNFMKVLLENKQLDPRYFSAKGYGEYKPIASNATAAGRMKNRRVEILILPRTDV 251
>gi|298507057|gb|ADI85780.1| chemotaxis MotB protein [Geobacter sulfurreducens KN400]
Length = 266
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 6/152 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
K F + E Q + V + + F +++ P+L
Sbjct: 104 ATEKDFQAIKSSIEAYLIKQGAQDKVNVGINRRGLVVSLKEAGFFDSGSAIVKESAYPLL 163
Query: 97 QLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+A L+ + + + ++ HTD++ +N +S RA I +L + I
Sbjct: 164 AKVAESLSAYSN-PVRVEGHTDTMPISSAQFPSNWELSTARATNIVHFLTRSYDFDPGAI 222
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S GF PI N+T GR N+R++I +
Sbjct: 223 SAAGFGEYRPIADNNTAEGRSKNRRVDIVLLS 254
>gi|260900780|ref|ZP_05909175.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|308108014|gb|EFO45554.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
Length = 205
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 72/197 (36%), Gaps = 11/197 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + + + + ++ C +S + + D D ++ + T
Sbjct: 1 MKNITI-IALSLVVAACSSSSERGDEYDYIDTPIADQWADHQDDDSDGVINQ-RDLCPGT 58
Query: 62 --GIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
G + G + + F ++ ++ L ++PST I +Q
Sbjct: 59 PLGAEIDNDGCGSYANSSQQMQIRVLFANDSDEINPVFAKQIRELSDFLKEYPSTSIELQ 118
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ G ++NL +S+ RA+ + + + + +++ G+ T +V
Sbjct: 119 GYASRTGGSEHNLDLSKRRAENV-RKALLQNGIAPDRVTIVGYGDTVLATTGTDEVSHAL 177
Query: 175 NQRIEIQIFP-RGNIKK 190
N+R+ + +G +KK
Sbjct: 178 NRRVTATVVGHKGEVKK 194
>gi|118474477|ref|YP_891591.1| outer membrane fibronectin-binding protein [Campylobacter fetus
subsp. fetus 82-40]
gi|118413703|gb|ABK82123.1| outer membrane fibronectin-binding protein [Campylobacter fetus
subsp. fetus 82-40]
Length = 345
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 69/165 (41%), Gaps = 4/165 (2%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
S +++ + + G + ++ + G+VV G
Sbjct: 178 SAAPAPVLVEEQPAPAPTKIVPAIGDEDGDGV--LDNVDRCPGTPKGVVVDEYGCEKVIR 235
Query: 76 IPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + +F + ++ ++ +A ++ P + ++ HTDS G N +S +RA
Sbjct: 236 LSLKANFAFDSAKVTPEYEAKIKEVADVMVANPEYRVILEGHTDSTGPEDYNKKLSVKRA 295
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
D + + +++ S I+ GF + PI +N TK GR N+R+E
Sbjct: 296 DAVAA-TLEKMGVSKNKITTVGFGEEQPIASNATKEGRAENRRVE 339
>gi|302381967|ref|YP_003817790.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302192595|gb|ADL00167.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 200
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 3/181 (1%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
G+ + + SGC + +V + +R A + +
Sbjct: 22 TGVVLSLGLLASGCATRGFVRDQVAVVDGRVDATD-QRVAQVEGTAGQALERANAAQVLA 80
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTL 123
+ + L + L +A L + + + IQ HTD+ G
Sbjct: 81 EGKFMYEVVLSDDSVKFPSDRDALSPEAEQRLAELAQRLKAENKNVYLEIQGHTDAAGPE 140
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N + + RA+ ++ L ++G++ NR ++ + + P+ N T GR N+R+ I +
Sbjct: 141 SYNDALGEARAEAVRRSLSRQGIALNRMATIS-YGEEAPVADNATPEGRAQNRRVAIVVL 199
Query: 184 P 184
Sbjct: 200 S 200
>gi|130681|sp|P22263|PORF_PSESY RecName: Full=Outer membrane porin F; Flags: Precursor
gi|151407|gb|AAA25910.1| oprF [Pseudomonas syringae]
Length = 344
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + +D N ++DK D + V G +
Sbjct: 178 GGSKKVEAAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVR 231
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ ++ +A + ++P T ++ HTDS+G N +S+ RA
Sbjct: 232 VELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTTTVEGHTDSVGPDAYNQKLSERRA 291
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +K L+ + ++ G+ P+ N T+ GR N+R+E ++ +
Sbjct: 292 NAVKQVLVNQYGVGASRVNSVGYGESKPVADNATEAGRAVNRRVEAEVEAQAK 344
>gi|347153|gb|AAC36899.1| protein F [Pseudomonas fluorescens]
Length = 317
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P T + + HTDS+G N +SQ RAD +
Sbjct: 215 DVKFDFDKSVVKPNSYGDVKNLADFMAQYPDTNVEVAGHTDSVGPDAYNQKLSQRRADAV 274
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
K L++ GV+ +R SV G+ P+ N T+ GR N+R+E
Sbjct: 275 KQVLVKDGVAPSRITSV-GYGESRPVADNATEAGRAVNRRVE 315
>gi|49083000|gb|AAT50900.1| PA3692 [synthetic construct]
Length = 262
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 65/157 (41%), Gaps = 3/157 (1%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
++ + +R + LD + + + + + + + L+
Sbjct: 98 AEAQLQNASAQRAQARLDARTAQLDK--LRSQLNAKQTSRGTMVTFGDVLFDLDKSDLKP 155
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+ +Q +A L + P + ++ +TDS G+ N +S+ RAD + + S
Sbjct: 156 GAMRNIQQLAEFLQQNPERQVIVEGYTDSTGSANYNQRLSERRADSV-RMALLSRGISPE 214
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ RG+ +YP+ +N T GR N+R+E+ I
Sbjct: 215 RVATRGYGKEYPVASNGTSSGRAMNRRVEVTISNDAK 251
>gi|309388829|gb|ADO76709.1| OmpA/MotB domain protein [Halanaerobium praevalens DSM 2228]
Length = 282
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 70/178 (39%), Gaps = 6/178 (3%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM 71
+ + G + + + D + + + ++ + + V
Sbjct: 60 LGVLQGGKTITEDPNIDAGNLGQDYAQAPENIQQVMKQIDNYIENNNLSDKVNVENKRKG 119
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NN 126
+ + + + + + ++ +L I+ IL + P+ I I+ HTD + +N
Sbjct: 120 LVISLTGEILYELGKADIREQGKEVLTKISEILKEIPN-DIMIEGHTDDLPIRTAEFPSN 178
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S RA + YLI+ +S G++ P+ TN++ GR N+R+E+ +
Sbjct: 179 WELSTARAVNVIKYLIEEKDFDPARLSAAGYSEYRPVATNNSTEGRAENRRVEVVVLN 236
>gi|302338088|ref|YP_003803294.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301635273|gb|ADK80700.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 242
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 81/197 (41%), Gaps = 15/197 (7%)
Query: 4 ELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE----FQMQL 58
L L+ F + +G ++ K+ + + + G +LD+A + F+ ++
Sbjct: 49 NLILAAFSGLGMYTGGQT--LQEGKLAELGNMIMSLPSTNRGRALDEARRKAISQFEPEI 106
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE-KKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + V + + + F ++ ++ LQ ++ +L P I+ H
Sbjct: 107 KSQKVRVQQDERGLIITLASDAFFKPASAEVQIEESRETLQKLSALLRSMPGRKFRIEGH 166
Query: 117 TDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
TDS G N +S +RA + + + + V GFA P+ + T+ G
Sbjct: 167 TDSTPTDPTGPWPTNWELSTDRATNVL-HYLVDFGVTENQFQVAGFADTVPLASESTEEG 225
Query: 172 RQNNQRIEIQIFPRGNI 188
+ N+R++I I G++
Sbjct: 226 KAYNRRVDIIILSDGHL 242
>gi|268680520|ref|YP_003304951.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
gi|268618551|gb|ACZ12916.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
Length = 335
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G VV G + V F + ++ F+P +Q +A + + P + ++ HTDS
Sbjct: 214 KGTVVDVDGCTKIIRLHVKFDF-DKSVVKPAFMPEIQKVADFMKQNPGYSVVLEGHTDSK 272
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ N +S RA + + + ++ + P+ TNDT+ GR N+R++
Sbjct: 273 GSDAYNQKLSDSRAKAVAK-ALSNLGVAAAKVTTEAYGESKPVATNDTEAGRAENRRVD 330
>gi|85858721|ref|YP_460923.1| peptidoglycan-associated lipopeptide [Syntrophus aciditrophicus SB]
gi|85721812|gb|ABC76755.1| peptidoglycan-associated lipopeptide [Syntrophus aciditrophicus SB]
Length = 210
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 65/195 (33%), Gaps = 20/195 (10%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM-QLQDTGIVVSRI 68
+GC ++ + V L E + L++ + +
Sbjct: 17 LAFVFTTGCAKKQVLQEGEAAVEKAAGAEVKPATEPGLTPEELAAREKALKEQALKEQQE 76
Query: 69 GDMITCY------------------IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ + + + L + +LQ A L
Sbjct: 77 RERLAGEKAAAEKAAAEAAARAGEVLVDINFEFDQSSLTPESREILQKHAAWLAAHSGYS 136
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ I+ H D +GT + NL + + RA +L+ G+ +R ++ + + P+D +T+
Sbjct: 137 LVIEGHCDDLGTTEYNLALGERRAAEAMRFLVALGIDRSRIKTIS-YGEEMPLDPAETEE 195
Query: 171 GRQNNQRIEIQIFPR 185
R N+R + P+
Sbjct: 196 ARAKNRRAHFVVTPK 210
>gi|237742042|ref|ZP_04572523.1| outer membrane porin F [Fusobacterium sp. 4_1_13]
gi|229429690|gb|EEO39902.1| outer membrane porin F [Fusobacterium sp. 4_1_13]
Length = 348
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
S + + + + F + L + +L+ +A +L + + HTDS + K
Sbjct: 230 SIEANSLLITLDSGILFDVDKYDLRPEAEEVLKNLAIVLKEADIKAFEVDGHTDSDASDK 289
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N ++S+ RA+ +K++L +G+++ I+++G+ PI +NDT G+Q N+R+EI I
Sbjct: 290 HNQILSENRANAVKNFLTSQGITAE--ITIKGYGESRPIASNDTPEGKQKNRRVEIVI 345
>gi|206579667|ref|YP_002238891.1| OmpA domain protein [Klebsiella pneumoniae 342]
gi|206568725|gb|ACI10501.1| OmpA domain protein [Klebsiella pneumoniae 342]
Length = 567
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L+ L + P +I + HTDS+G K N L+S +RA+ ++
Sbjct: 436 SLFDTGKWVLKPGSTKRLVNSLMDIKARPGWLIVVAGHTDSVGEEKANQLLSLKRAESVR 495
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ G + +V+G+ PI TNDT GR N+R+EI + P+
Sbjct: 496 DWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISLVPQ 542
>gi|167032120|ref|YP_001667351.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166858608|gb|ABY97015.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 263
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 71/166 (42%), Gaps = 6/166 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYI 76
+ ++ +V + +S +A+ + + + +
Sbjct: 82 TNQRIEVAKQTIALRTAEGELKNASAQRAQAKLDARDAQIAKLQDSLNAKQTDRGTLVTF 141
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ L+ P + +A L + P + ++ +TDS+G+ N +S+ RA
Sbjct: 142 GDVLFDFNKAELKSNAYPNITKLAQFLQENPERKVIVEGYTDSVGSANYNQSLSERRAGS 201
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ L++ GV R +S +G+ +YP+ N + GR N+R+E+ I
Sbjct: 202 VRMALVRAGVDPARIVS-QGYGKEYPVADNGSNSGRAQNRRVEVTI 246
>gi|21230404|ref|NP_636321.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66769602|ref|YP_244364.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
8004]
gi|188992813|ref|YP_001904823.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
campestris str. B100]
gi|21111963|gb|AAM40245.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66574934|gb|AAY50344.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
8004]
gi|167734573|emb|CAP52783.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
campestris]
Length = 365
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
G ++ +D+ I ++ + ++ L + +L
Sbjct: 216 DDDGDGVNNCDDKCPTSQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAVSILSEAT 275
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
IL ++P + + HTDS GT N +S+ RA + YL + GV ++R + G+
Sbjct: 276 EILKRYPDLKVEVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGES 335
Query: 161 YPIDTN------DTKVGRQNNQRIEIQI 182
PI N D GR N+R E+ +
Sbjct: 336 RPIAPNANPDGSDNPEGRAKNRRTELNV 363
>gi|261211335|ref|ZP_05925623.1| outer membrane protein A precursor [Vibrio sp. RC341]
gi|260839290|gb|EEX65916.1| outer membrane protein A precursor [Vibrio sp. RC341]
Length = 322
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY-IPVHVSFVSEVFLEKKFLPMLQL 98
+ + + + + + + + T + + L+ + L
Sbjct: 171 GSQEPAPVVEQRPAEPAPVAEPVVEKVAVTKTFTFQHLDSSTFATASAELKPATVKKLDK 230
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
I LN++P + + HTDS G+ N +S+ RA + L +G+ ++R IS +G
Sbjct: 231 IVGYLNQYPQAKVEVVGHTDSTGSDAYNQKLSERRAQAVAKALEAQGIDASR-ISAKGLG 289
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
PI +N T GR+ N+R+E+ I
Sbjct: 290 ESSPIASNTTAEGREKNRRVELVI 313
>gi|254524919|ref|ZP_05136974.1| outer membrane protein [Stenotrophomonas sp. SKA14]
gi|219722510|gb|EED41035.1| outer membrane protein [Stenotrophomonas sp. SKA14]
Length = 363
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 6/151 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
G ++ +D+ I ++ + + L + +L
Sbjct: 211 ADLDDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSNLRPDAVAILG 270
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IL ++P + + HTDS GT N +S+ RA + +YL + GV + R I G+
Sbjct: 271 EATEILKRYPDLRVEVAGHTDSKGTDAYNQKLSERRATAVYNYLTKNGVDAGRLIGPVGY 330
Query: 158 AYKYPIDTN------DTKVGRQNNQRIEIQI 182
PI N D GR N+R E+ +
Sbjct: 331 GKSRPIAPNTNPDGSDNPEGRAKNRRTELNV 361
>gi|116327025|ref|YP_796745.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116332316|ref|YP_802034.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116119769|gb|ABJ77812.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116126005|gb|ABJ77276.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 667
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 61/121 (50%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ + RI + T I + + P L +A I+ + P I I+ HTD++G
Sbjct: 544 LQLPRIEERGTIQINNLFFESKSFRIIPESEPELNRLAEIMKENPDIKIQIEGHTDNVGK 603
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K+NLL+S++RA I YL Q+ I RGF +P+ ND++ GR+ N+R+ I
Sbjct: 604 KKDNLLLSEKRAIAIAEYLSQKHSIPTERIKTRGFGDNFPLSKNDSEEGRRKNRRVNFTI 663
Query: 183 F 183
Sbjct: 664 L 664
>gi|262170812|ref|ZP_06038490.1| outer membrane protein A precursor [Vibrio mimicus MB-451]
gi|261891888|gb|EEY37874.1| outer membrane protein A precursor [Vibrio mimicus MB-451]
Length = 322
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 2/144 (1%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY-IPVHVSFVSEVFLEKKFLPMLQL 98
+++++ E ++ + + T + + L+ L
Sbjct: 171 GSEAPAAVEQRPAEPAPVAEEPVVEKVAVTKTFTFQHLDSGTFANNSAELKPSMETKLDK 230
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ LN++P + + HTDS G+ N +S++RA + L +GV + R I+ +G
Sbjct: 231 LVGYLNQYPQAKVEVVGHTDSNGSKAYNQKLSEKRAQAVAKALEAQGVDAAR-ITAKGQG 289
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
PI +N T GR+ N+R+E+ I
Sbjct: 290 ESNPIASNATAEGREKNRRVELVI 313
>gi|33603081|ref|NP_890641.1| putative outer membrane protein [Bordetella bronchiseptica RB50]
gi|33568712|emb|CAE34470.1| putative outer membrane protein [Bordetella bronchiseptica RB50]
Length = 215
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 72/203 (35%), Gaps = 25/203 (12%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR--------------------- 42
+ + ISGC + +
Sbjct: 9 RVAVVSAAALLISGCATPQQTNTAIGTGAGAAVGAGIGALIGHGKGAAIGAGIGAVAGGL 68
Query: 43 FGSSLDKAEDEFQMQLQDT-GIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
G + + + Q + GI V + D + IP +V + L+ LP+L +
Sbjct: 69 IGYNWSGVKQDVQQSGASSLGIDVVEMPDGSLKVNIPSNVSFDTDKSQLKPALLPVLDSV 128
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A LN+ P + HTDS G+ +N +S RA + S + + + ++V G
Sbjct: 129 ARALNQHPELRTKVVGHTDSTGSAAHNQQLSVNRARAVTS-YLGKQGVAQGRMTVEGRGA 187
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
P+ N T GR N+R+E+ +
Sbjct: 188 NDPVGDNATAEGRAANRRVEVYL 210
>gi|322418762|ref|YP_004197985.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320125149|gb|ADW12709.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 465
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 57/102 (55%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + + + + + + K+P+T I+ HTD++G+ +N+ +SQ RA+ + S+
Sbjct: 234 FDIDQAIIRTELHDQIAQVGNFMKKYPTTTAVIEGHTDNVGSYNHNMDLSQRRAEAVVSH 293
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+++ +S +G+ + PI N T+ GRQ N+RIE I
Sbjct: 294 LVEQYGIDRSRLSAKGYGFTRPIADNATEEGRQKNRRIEAVI 335
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 62/143 (43%), Gaps = 1/143 (0%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
+ + ++ + D V ++ + + + + ++ ++ + +
Sbjct: 317 ADNATEEGRQKNRRIEAVIDCAFDVQQVTPAERLCMALVLDFDSGKADIKPQYRDEIAKV 376
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A + ++ +T I+ HTD+ G+ N+ +SQ+RA + YL+ +S +G+
Sbjct: 377 ADYMKRYTTTTAVIEGHTDNTGSPSQNMKLSQQRAQNVVDYLVNNFGIERSRLSAKGYGA 436
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
+ NDT GRQ N+RI I
Sbjct: 437 TRRVAYNDTPEGRQKNRRINAVI 459
>gi|121533623|ref|ZP_01665450.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
gi|121307614|gb|EAX48529.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
Length = 262
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 16/168 (9%)
Query: 31 HKSNDTDIVNKRFGSSL----------DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ + + + + + + I + D + I
Sbjct: 86 TPAVVSGMAGANEQAYMIETVQLVELKKQLDRYIAENNLAGDIQTALTDDGLMIRIKDTA 145
Query: 81 SF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERAD 135
F L+ + L + IA ++ P + + HTD++ N +S RA
Sbjct: 146 LFASGRAELKPESLRLGTEIARMIAPLPQ-RVIVAGHTDNMPINTPEFPSNWDLSTVRAL 204
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
Y++ + ISV G+ P+ +NDT+ GR N+R+E+ I
Sbjct: 205 NFMKYMLSQAEIKPERISVSGYGEYRPVASNDTEEGRAKNRRVEVLIM 252
>gi|24373103|ref|NP_717146.1| flagellar motor protein MotB [Shewanella oneidensis MR-1]
gi|24347292|gb|AAN54590.1|AE015599_2 sodium-driven polar flagellar protein PomB [Shewanella oneidensis
MR-1]
Length = 308
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 7/177 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G AS ++ + + + K E ++ D I + +G I I
Sbjct: 124 GEASATAQETEDAVKAEAAAAQDKINQQVKKMAQELNQEIADGAIEIESLGQQIIIRIRE 183
Query: 79 HVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQER 133
SF S FL+ +F P+++ + +L P I + +TD + +N +S +R
Sbjct: 184 KGSFASGSGFLQPRFKPVVRSVGELLKDVPGI-ITVSGYTDDMQISDELYSSNWDLSSKR 242
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + L+Q + + V G A PI ND+ R N+R+EI I +G K+
Sbjct: 243 AVAVADVLLQVKGFDPKRMKVVGMASNNPIVPNDSPDNRARNRRVEIAI-EQGKAKE 298
>gi|254492051|ref|ZP_05105228.1| OmpA family protein [Methylophaga thiooxidans DMS010]
gi|224462748|gb|EEF79020.1| OmpA family protein [Methylophaga thiooxydans DMS010]
Length = 297
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
SRE+ KV + + ++ K ++ + ++++ IVV I I S
Sbjct: 101 SREQLKVTMDAEKLAEQQAQQVAEETQKFKEALEKEIEEGLIVVESQYSRIVIRIREKGS 160
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADV 136
F+ + L F+P+L+ I +L K IA+ HTD + ++N +S RA
Sbjct: 161 FMSGDARLNNDFIPILKKIHNVLLKT-DGRIAVAGHTDDVPINTSRYRSNWELSTSRATS 219
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ L+ G + G+A P++ ND+ R N+R+EI +
Sbjct: 220 VVHELLAPGDMPAERFVLEGYADTKPLEPNDSPTNRARNRRVEIIVL 266
>gi|229592015|ref|YP_002874134.1| putative outer membrane porin A protein [Pseudomonas fluorescens
SBW25]
gi|229363881|emb|CAY51363.1| putative outer membrane porin A protein [Pseudomonas fluorescens
SBW25]
Length = 326
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P+T + + HTDS+G N +SQ RAD +
Sbjct: 218 DVKFDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLSQRRADAV 277
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
K ++ + + I+ G+ P+ N T+ GR N+R+E
Sbjct: 278 KQ-VLVKDGVAPSRITAVGYGESRPVADNATEAGRAVNRRVE 318
>gi|168186129|ref|ZP_02620764.1| chemotaxis MotB protein [Clostridium botulinum C str. Eklund]
gi|169295847|gb|EDS77980.1| chemotaxis MotB protein [Clostridium botulinum C str. Eklund]
Length = 242
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 61/171 (35%), Gaps = 6/171 (3%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV- 83
+ + K +D D + V + + + ++ F
Sbjct: 73 EAPIVGPPEEMGSKAGSGNEEMYRKVKDFTGKNNLDGTVQVKKDARGVILELKENILFDS 132
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKS 139
+ ++ +L I+ ++ P+ + I+ HTD++ +N +S +RA +
Sbjct: 133 GQADIKSSSKEILDKISELIKSVPNG-VVIEGHTDNVPIHNSKYDSNWELSTQRAVNVLK 191
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
Y + + G+ +PI NDT R N+R+ I I KK
Sbjct: 192 YFVVNKGEKPEKLQAAGYGEYHPIAKNDTYADRAKNRRVNILITVDEKEKK 242
>gi|4580974|gb|AAD24561.1|AF117969_1 OprF [Pseudomonas fluorescens]
Length = 326
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P+T + + HTDS+G N +SQ RAD +
Sbjct: 218 DVKFDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLSQRRADAV 277
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
K ++ + + I+ G+ P+ N T+ GR N+R+E
Sbjct: 278 KQ-VLVKDGVAPSRITAVGYGESRPVADNATEAGRAVNRRVE 318
>gi|45656435|ref|YP_000521.1| peptidoglycan associated periplasmic protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|45599670|gb|AAS69158.1| peptidoglycan associated periplasmic protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 660
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 57/118 (48%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + I + + P L +A I+ + P I I+ HTD+IG K+NL++
Sbjct: 543 ERGSIQINNLFFESKSFQIAPESAPELDRLAEIVKENPDIEIQIEGHTDNIGKKKDNLIL 602
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
S++RA + YL Q+ S I +GF P+ ND++ R+ N+R+ I +
Sbjct: 603 SEKRAAAVAEYLFQKHSISKTRIQTKGFGDSVPLSKNDSEEARKKNRRVNFTILKKSK 660
>gi|24216384|ref|NP_713865.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
gi|24197668|gb|AAN50883.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
Length = 660
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 57/118 (48%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + I + + P L +A I+ + P I I+ HTD+IG K+NL++
Sbjct: 543 ERGSIQINNLFFESKSFQIAPESAPELDRLAEIVKENPDIEIQIEGHTDNIGKKKDNLIL 602
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
S++RA + YL Q+ S I +GF P+ ND++ R+ N+R+ I +
Sbjct: 603 SEKRAAAVAEYLFQKHSISKTRIQTKGFGDSVPLSKNDSEEARKKNRRVNFTILKKSK 660
>gi|330898192|gb|EGH29611.1| outer membrane porin OprF [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 344
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + +D N ++DK D + V G +
Sbjct: 178 GGSKKVEAAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVR 231
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ ++ +A + ++P T ++ HTDS+G N +S+ RA
Sbjct: 232 VELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTTTVEGHTDSVGPDAYNQKLSERRA 291
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +K L+ + ++ G+ P+ N T+ GR N+R+E ++ +
Sbjct: 292 NAVKQVLVNQYGVGASRVNSVGYGESKPVADNATEAGRAVNRRVEAEVEAQAK 344
>gi|330503542|ref|YP_004380411.1| OmpF family protein [Pseudomonas mendocina NK-01]
gi|328917828|gb|AEB58659.1| OmpF family protein [Pseudomonas mendocina NK-01]
Length = 326
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++++ ++ +A +N++P T ++ HTDS+G+ N +S+ RA+ +
Sbjct: 216 DVKFDFDKDRVKEESYGDIKNLADFMNQYPQTTTTVEGHTDSVGSDAYNQGLSERRANAV 275
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
++ L+ + ++ G+ P+ N T GR N+R+E ++ IK+
Sbjct: 276 RNVLVNQYGVDGSRVNAVGYGETRPVADNATDSGRAINRRVEAEV--EAQIKQ 326
>gi|74318223|ref|YP_315963.1| outer membrane protein, porin-associated lipoprotein [Thiobacillus
denitrificans ATCC 25259]
gi|74057718|gb|AAZ98158.1| outer membrane protein, porin-associated lipoprotein [Thiobacillus
denitrificans ATCC 25259]
Length = 188
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 66/185 (35%), Gaps = 6/185 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASR-----EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+K++ + + + +S CG E + + + + +D A E
Sbjct: 1 MKKIAIPVLLALVLSACGTTGSKDATVEDRTGGSSVTTVDKVGAGAESTGVDGAGVEGSA 60
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
D R ++ ++ P+L+ A L I +Q +
Sbjct: 61 LPGDQAAGDPRKEPANALSKRSVFFDFDSFVVKDEYRPVLEAHAGYLASKRDARITLQGN 120
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
D G+ + NL + Q+RA+ ++ L S+ + F + P + DT+ N+
Sbjct: 121 ADERGSREYNLALGQKRAEAVRKALAVL-GVSDAQMEAISFGEEKPRNEADTEEAYAENR 179
Query: 177 RIEIQ 181
R +I
Sbjct: 180 RTDIV 184
>gi|86143638|ref|ZP_01062014.1| Thrombospondin type 3 repeat:OmpA/MotB [Leeuwenhoekiella blandensis
MED217]
gi|85829681|gb|EAQ48143.1| Thrombospondin type 3 repeat:OmpA/MotB [Leeuwenhoekiella blandensis
MED217]
Length = 461
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 63/166 (37%), Gaps = 14/166 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC A + V + ++ + + + L +
Sbjct: 309 GCPFADADGDGVADKDDDCPNVAGPASNNGCPEVDASVLEVLNGEAGRI----------- 357
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + + L IA+I+ ++P+ ++ H DS + N+ +S+ RA
Sbjct: 358 ---LFDTDKATIRTSSYETLARIASIVKEYPTASFEVEGHADSRASNAYNMDLSERRAQS 414
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL + + +S++ + + PI N T G Q N+R+++ +
Sbjct: 415 VVDYLTSKEGVNASQLSIKAYGEEQPIAPNTTAAGMQLNRRVKLTL 460
>gi|307824145|ref|ZP_07654372.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307734929|gb|EFO05779.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 396
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 5/155 (3%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-DTGIVVSRIGDMITCYIPVHVSFVSEVFL 88
L + D + L G V++ G I + +
Sbjct: 245 LKGTTPPVADCSALDDDADGINNCKDKCLNTPKGAHVNQFGCWIV----DVKFDNDKSNI 300
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ ++ L T++N+ P I +Q HT S GT++ N +S+ RA +K+YL + +
Sbjct: 301 KPQYYRELDNAVTVINQNPGVNIEVQGHTSSTGTVEYNQRLSERRALAVKNYLSSKSAHA 360
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R ++ RG+ PIDTN+T+ GR NN+R+++++
Sbjct: 361 GRTLTARGYGLTQPIDTNETEEGRANNRRVQLEVL 395
>gi|256828886|ref|YP_003157614.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256578062|gb|ACU89198.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 375
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPM 95
D + +DK D G+ V G I I + V + ++ +
Sbjct: 227 DDDGDGVNNCVDKCPDTI------MGLAVDADGCPIPEVIRLKVNFDFDKSDIKPAYHQE 280
Query: 96 LQLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L A + + S TV+ I HTDS G + N +S+ RA ++ YL+ S
Sbjct: 281 LADFAAYMKQQQSFTVVEIAGHTDSKGADEYNQKLSERRAKAVRDYLVTNFGLDGSLFSA 340
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
RG+ P+ +NDT+ GR N+R+E ++ +G KK
Sbjct: 341 RGYGESKPVASNDTEEGRAENRRMEAEL--KGVYKK 374
>gi|15598888|ref|NP_252382.1| Lipotoxon F, LptF [Pseudomonas aeruginosa PAO1]
gi|107103206|ref|ZP_01367124.1| hypothetical protein PaerPA_01004275 [Pseudomonas aeruginosa PACS2]
gi|116051689|ref|YP_789472.1| putative outer membrane protein, OmpA [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218890031|ref|YP_002438895.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|254236602|ref|ZP_04929925.1| hypothetical protein PACG_02605 [Pseudomonas aeruginosa C3719]
gi|254242387|ref|ZP_04935709.1| hypothetical protein PA2G_03131 [Pseudomonas aeruginosa 2192]
gi|296387801|ref|ZP_06877276.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
PAb1]
gi|313109098|ref|ZP_07795070.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
gi|9949856|gb|AAG07080.1|AE004788_10 Lipotoxon F, LptF [Pseudomonas aeruginosa PAO1]
gi|115586910|gb|ABJ12925.1| putative outer membrane protein, OmpA [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126168533|gb|EAZ54044.1| hypothetical protein PACG_02605 [Pseudomonas aeruginosa C3719]
gi|126195765|gb|EAZ59828.1| hypothetical protein PA2G_03131 [Pseudomonas aeruginosa 2192]
gi|218770254|emb|CAW26019.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|310881572|gb|EFQ40166.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
Length = 261
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 65/157 (41%), Gaps = 3/157 (1%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
++ + +R + LD + + + + + + + L+
Sbjct: 98 AEAQLQNASAQRAQARLDARTAQLDK--LRSQLNAKQTSRGTMVTFGDVLFDLDKSDLKP 155
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+ +Q +A L + P + ++ +TDS G+ N +S+ RAD + + S
Sbjct: 156 GAMRNIQQLAEFLQQNPERQVIVEGYTDSTGSANYNQRLSERRADSV-RMALLSRGISPE 214
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ RG+ +YP+ +N T GR N+R+E+ I
Sbjct: 215 RVATRGYGKEYPVASNGTSSGRAMNRRVEVTISNDAK 251
>gi|295681051|ref|YP_003609625.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295440946|gb|ADG20114.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 559
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTG--IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
+G DK ++ T ++ + I + F + L+ P
Sbjct: 406 AGLGWGLYRDKQLQVALERVTATSHSPSIAAHSPPLAVTIDNFLLFDTGKTTLKPGAEPR 465
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L+ + ++ P I I HTD++G N +S+ RA I+ + + S +++
Sbjct: 466 LKGVLDLIRANPDKRILIAGHTDNVGPSVANQKLSEARAQAIRDWFVNTASLSVTRFAIQ 525
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G+ PI +N+++ GR+ N+R+EI + P
Sbjct: 526 GYGDTRPIASNESRQGREMNRRVEISLIP 554
>gi|269103007|ref|ZP_06155704.1| peptidoglycan-associated outer membrane lipoprotein [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162905|gb|EEZ41401.1| peptidoglycan-associated outer membrane lipoprotein [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 181
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 67/182 (36%), Gaps = 11/182 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +MT ++ C + + SS+
Sbjct: 6 VLKSLAIALPLMT-LAACSSTEGTNSSAADQTAGGS--------SSMVDQGAISTPVDGG 56
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G + + V F ++ ++ ML+ A L P+ + I+ H D
Sbjct: 57 NGSMSEQEIRNQQLRQETTVFFKFDNAEIQPEYQAMLEAHAEYLRDHPAVKVIIEGHADE 116
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N+ + + RA + YL GV +++ S+ + + P+ T N+R
Sbjct: 117 RGTPEYNIALGERRAAAVVKYLQALGVPASQM-SIVSYGEEKPLVLGHTDADYAKNRRAV 175
Query: 180 IQ 181
+
Sbjct: 176 LV 177
>gi|262041860|ref|ZP_06015044.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040765|gb|EEW41852.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 565
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 54/108 (50%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L+ +L + P +I + HTDSIG ++N +S +RA+ ++
Sbjct: 435 LFDTGKSALKPGSTKLLVNSLLGIKVKPGWLIVVAGHTDSIGNDRSNQQLSLKRAEAVRD 494
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ G +V+G+ P+ +N+T GR N+R+EI + P+ +
Sbjct: 495 WMRDTGDVPESCFAVQGYGASRPVASNETPEGRAQNRRVEISLVPQKD 542
>gi|78221681|ref|YP_383428.1| OmpA/MotB [Geobacter metallireducens GS-15]
gi|78192936|gb|ABB30703.1| OmpA/MotB [Geobacter metallireducens GS-15]
Length = 267
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 6/144 (4%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPST 109
E Q + V + + F + + P+L +A L + +
Sbjct: 116 EAYLVKQGAQAKVSVGITQRGLVVSLKEAGFFDSGSAIVRESAYPLLAKVAESLAGYSNA 175
Query: 110 VIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+ ++ HTD++ N +S RA I +L + IS GF PI
Sbjct: 176 -VRVEGHTDTMPISSPLFPSNWELSTARATNIVHFLTKSYDFQPSAISAAGFGEYRPIAD 234
Query: 166 NDTKVGRQNNQRIEIQIFPRGNIK 189
N T GR N+R++I + K
Sbjct: 235 NATAEGRSKNRRVDIVLLSGEGEK 258
>gi|225075662|ref|ZP_03718861.1| hypothetical protein NEIFLAOT_00678 [Neisseria flavescens
NRL30031/H210]
gi|224953084|gb|EEG34293.1| hypothetical protein NEIFLAOT_00678 [Neisseria flavescens
NRL30031/H210]
Length = 219
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 2/171 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + G A K + + V G +D E + + L +T I
Sbjct: 50 KTAMYGLGGAAVCGIVGALTHGGKGARNSALACGAVGAGIGGYMDYQEKKLRQSLANTNI 109
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V R G+ I +P +V+F L L A L ++P T + I HTD+ G
Sbjct: 110 EVERQGNQIKLVMPENVTFATGSAALSGHAQSALSAAAQTLVQYPDTTLTINGHTDNTGN 169
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
N +S+ RA+ + + +Q S+ +S G+ + PI +N T GR
Sbjct: 170 DAINEPLSRNRAESV-AIFLQSRGVSSTRLSTFGYGSRQPIASNATVEGRA 219
>gi|313674297|ref|YP_004052293.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312940995|gb|ADR20185.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 665
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
++ + + + + + + +E + L++ +
Sbjct: 516 KDTDEDGIIDIEDDCPTLAGVADNNGCPEITEETKEVLKEALEGIE-------------- 561
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ + + LP+L + T++ + P + I HTD+ G NLL+S +RA K Y
Sbjct: 562 FELASDVIRAQSLPILDKVVTVMQENPDYKLKISGHTDNQGDDDANLLLSHKRAQATKKY 621
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L+ +G++ R +V G+ PI++NDT GR N+R+E +I
Sbjct: 622 LMDQGIAILRLDAV-GYGEMQPIESNDTAEGRAKNRRVEFEIV 663
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 79 HVSFVSEVFL-EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
H++FV+ + L A++L P + I HT + N +S RA +
Sbjct: 399 HITFVNNADIFRSDAYYELDRFASLLQSNPQMQVEIIGHTAQLPLEAENDRLSYNRAKAV 458
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV---GRQNNQRIEIQIFP 184
Y ++ V +R + ++G K +N G + RI I+I
Sbjct: 459 ADYFEKKNVHPDR-LRIKGAGQKLAFSSNMDVALKNGIELEDRITIKIIS 507
>gi|56421066|ref|YP_148384.1| flagellar motor protein MotB [Geobacillus kaustophilus HTA426]
gi|56380908|dbj|BAD76816.1| motility protein B (flagellar motor rotation) [Geobacillus
kaustophilus HTA426]
Length = 259
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 69/178 (38%), Gaps = 9/178 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD----TGIVVSRIGDMITCY 75
+ ++ + +VN + L + + + + D + S + +
Sbjct: 74 TPPAQDEEGRHQAKQPSPVVNGKEKEELGQIKAKIDSYIHDNKLTGKLQTSLTDEGLAIT 133
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLIS 130
I + F + K + I+ +L P I I HTD++ +N +S
Sbjct: 134 ILDDILFDSGSAEVRMKDRRLAAEISALLVMNPPRNIIISGHTDNVPIHNEKFASNWELS 193
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
RA L++ R+ S +G+ PI +N T GR N+R+EI I PR ++
Sbjct: 194 VMRAVNFMKVLLENKQLDPRYFSAKGYGEYKPIASNATAAGRMKNRRVEILILPRTDV 251
>gi|253577343|ref|ZP_04854660.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon
786 str. D14]
gi|251843243|gb|EES71274.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon
786 str. D14]
Length = 269
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 9/153 (5%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGI----VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPML 96
+ +L+ + + +++ G+ + I F E ++ + +
Sbjct: 102 QEQQNLEALKKQLDTYIKENGLTDDLETKLNQSQLMITISDKALFASGEAVVKPEARQLA 161
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFI 152
+ I+ +L +FP + + HTD++ N +S RA L+ +
Sbjct: 162 KAISNMLQQFPDYEVIVSGHTDNVPISTYEFPSNWDLSSVRALNFMKILLLNTNLDPKKF 221
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
S G+ +P+ +NDT GR N+R+E+ I +
Sbjct: 222 SAIGYGEYHPVASNDTAAGRAQNRRVEVSIIRK 254
>gi|217415925|dbj|BAH03186.1| putative OmpA-family membrane protein [Edwardsiella tarda]
Length = 576
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 55/117 (47%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I + + + L+ L + P +I + HTD+ G+ + N ++S
Sbjct: 437 KIVRLDSMSLFDSGKSVLKTGSTKWLVNSLVGIKAKPGWLIVVSGHTDNTGSPQLNQMLS 496
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+RA+ ++ ++ G +V+G+ P+ TNDT GR N+R+EI + P+ N
Sbjct: 497 LKRAEAVRDWMRDTGDVPESCFAVQGYGASRPVATNDTPEGRALNRRVEISLVPQAN 553
>gi|170727809|ref|YP_001761835.1| flagellar motor protein MotB [Shewanella woodyi ATCC 51908]
gi|169813156|gb|ACA87740.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 322
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ E + +S+ + + K E ++ D I + +G I I
Sbjct: 140 SSSDSESEAKAKEESDAQAAAQENINEQVKKMAQELNTEIVDGAIEIESLGQQIIIRIRE 199
Query: 79 HVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQER 133
+F S FL+ +F P+++ + +L P + + HTD + +N +S +R
Sbjct: 200 KGAFSSGSGFLQPRFKPVVRRVGELLKDVPGI-VTVSGHTDDMNISNELYSSNWDLSSKR 258
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A + LI+ + + V G A P+ NDT R N+R+EI I
Sbjct: 259 AVAVAHELIKVKGFDPQRMKVVGMANSDPLVANDTSSHRARNRRVEIAI 307
>gi|170722426|ref|YP_001750114.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169760429|gb|ACA73745.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 576
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 51/108 (47%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L+ + L + P +I I HTD+ G+ + NL +S+ RA +
Sbjct: 446 SLFNSGSAQLKPESTKFLVNAFAGIKAQPGWLIVITGHTDATGSDEQNLRLSRARAAAVH 505
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
++ G N +V+G P+ +NDT+ GR N+R+EI++ P
Sbjct: 506 DWIQHMGDIPNNCFAVQGLGASEPVASNDTEQGRSTNRRVEIRLVPEA 553
>gi|347159|gb|AAC36902.1| protein F [Pseudomonas fluorescens]
Length = 317
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P+T + + HTDSIG N +SQ RAD +
Sbjct: 215 DVKFDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSIGPDAYNQKLSQRRADAV 274
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
K ++ + + I+ G+ P+ N T+ GR N+R+E
Sbjct: 275 KQ-VLVKDGVAPSRITAVGYGESRPVADNATEAGRAVNRRVE 315
>gi|330504604|ref|YP_004381473.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328918890|gb|AEB59721.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 261
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 63/149 (42%), Gaps = 6/149 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
N + + + D + Q L + + ++ L+ L
Sbjct: 104 NSSAQRAQALLDARDAQIRKLQESLNA-----KQTERGTLVTFGDVLFDFNKADLKSSAL 158
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
P + +A L + P + ++ +TDS+G+ N +S+ RA+ ++ LI R I
Sbjct: 159 PNITQLARFLQENPERQVIVEGYTDSVGSASYNQGLSERRAESVRRALI-RAGVEPTRIV 217
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+G+ +YP+ N + GR N+R+E+ I
Sbjct: 218 AQGYGKEYPVADNSSDSGRAQNRRVEVTI 246
>gi|313203887|ref|YP_004042544.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312443203|gb|ADQ79559.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 506
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 60/166 (36%), Gaps = 4/166 (2%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY-I 76
C + K D LDK + V I +
Sbjct: 342 CPDTPKGVK--VDTSGCPIDTDGDGVPDYLDKCPTVPGIAANKGCPEVKAETKKIFAQAL 399
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++K +L + ++N PS + I HTD+ G NL +SQ+RAD
Sbjct: 400 QGIQFESGKDVIKKSSFAILNKVVKVMNDNPSYNLEINGHTDNQGAAAMNLTLSQKRADA 459
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + ++ +GF P+ N T GR N+R+E ++
Sbjct: 460 V-KAYLTKNGVDAGKLAAKGFGQTVPVADNATAAGRAKNRRVEFKV 504
>gi|330502392|ref|YP_004379261.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328916678|gb|AEB57509.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 210
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 51/105 (48%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++++ ++ +A + ++P T ++ HTDS+G+ N +S+ RA +
Sbjct: 102 DVKFDFDKAQVKQESYGDIKALADFMKQYPQTSTVVEGHTDSVGSDAYNQGLSERRASAV 161
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L+ + + + G+ P+ N T GR N+R+E ++
Sbjct: 162 RDVLVNQYGVESGRVQAVGYGESRPVADNATADGRAINRRVEAEV 206
>gi|104780466|ref|YP_606964.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
gi|95109453|emb|CAK14154.1| putative outer membrane protein; OmpA family [Pseudomonas
entomophila L48]
Length = 262
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
++ + +R + LD + + + + + + ++ L+
Sbjct: 97 TAEAELKNAAAQRAQAKLDARDAQIKK--LQDSLNAKQTDRGTLVTFGDVLFDFNKANLK 154
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
P + +A L + P + I+ +TDS+G+ N +S+ RA+ + + R
Sbjct: 155 GSAYPNITKLAQFLQENPERKVIIEGYTDSVGSANYNQTLSERRANSV-RMALVRAGVDP 213
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I +G+ +YP+ N + GR N+R+E+ I
Sbjct: 214 ARIVAQGYGKEYPVADNTSNSGRAQNRRVEVTI 246
>gi|238024505|ref|YP_002908737.1| outer membrane protein [Burkholderia glumae BGR1]
gi|237879170|gb|ACR31502.1| Outer membrane protein [Burkholderia glumae BGR1]
Length = 602
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L+ + ++ P I + +TD+ G NL +S RA ++
Sbjct: 488 SLFDSGRSQLKPGSTRAMVGALEMIKAHPDKRILVAGYTDNSGNPNRNLKLSTARARAVR 547
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+LI+ +++G+ PI +NDT GR N+R+EI + P
Sbjct: 548 DWLIEASGIPTTQFAIQGYGDTRPIASNDTPEGRARNRRVEITLVPE 594
>gi|197116786|ref|YP_002137213.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
gi|197086146|gb|ACH37417.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
Length = 459
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 52/102 (50%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + + ++ + + + ++P+T I+ HTD++G + NL +S+ RA + Y
Sbjct: 228 FDIDKAEIRPEYRDEVATVGKFMKQYPTTTAVIEGHTDNVGDPQYNLDLSKRRAQAVVDY 287
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + RGF PI TN+T GRQ N+RIE I
Sbjct: 288 LVDNYGIERSRLEARGFGMARPIATNNTDEGRQANRRIEAII 329
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
+ + + + D V + + + + + ++ ++ + +
Sbjct: 311 ATNNTDEGRQANRRIEAIIDCAFDVKEVQPPDRLCMTLLLEFDSGKADIKPQYRDEMAKV 370
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+NK+P+T I+ HTD++G N+ +SQ RA+ YL+Q +S +G+ Y
Sbjct: 371 GEYMNKYPTTTAVIEGHTDNVGGSDYNMKLSQRRAENAVQYLVQNFGIDKSRLSAKGYGY 430
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
I N T GR N+RI I
Sbjct: 431 TRRIAYNSTPEGRAKNRRINAVI 453
>gi|347163|gb|AAA62423.1| protein F [Pseudomonas fluorescens]
Length = 317
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P+T + + HTDS+G N +SQ RAD +
Sbjct: 215 DVKFDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLSQRRADAV 274
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
K ++ + + ++ G+ P+ N T+ GR N+R+E
Sbjct: 275 KQ-VLVKDGVAPSRVTAVGYGESRPVADNATEAGRAVNRRVE 315
>gi|120599624|ref|YP_964198.1| flagellar motor protein MotB [Shewanella sp. W3-18-1]
gi|146292382|ref|YP_001182806.1| flagellar motor protein MotB [Shewanella putrefaciens CN-32]
gi|120559717|gb|ABM25644.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
gi|145564072|gb|ABP75007.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
gi|319425682|gb|ADV53756.1| stator-force generator of Na+ coupled flagellar motor, PomB
[Shewanella putrefaciens 200]
Length = 308
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G AS ++ D + + K E ++ D I + +G I I
Sbjct: 124 GEASSTAQETAEAVKADAAAAQDKINQQVKKMAQELNKEIIDGAIEIESLGQQIIIRIRE 183
Query: 79 HVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQER 133
SF S FL+ +F P+++ + +L P VI + +TD + +N +S +R
Sbjct: 184 KGSFASGSGFLQPRFKPVVRSVGELLKDVPG-VITVAGYTDDMQISDELYSSNWDLSSKR 242
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + L+Q ++ + V G A PI ND+ R N+R+EI I +G K+
Sbjct: 243 AVAVAHELVQVKGFDSKRMKVVGMASNNPIVPNDSPENRARNRRVEIAI-EQGKAKE 298
>gi|585710|sp|P37726|PORF_PSEFL RecName: Full=Outer membrane porin F; AltName: Full=Root adhesin;
Flags: Precursor
gi|5668610|gb|AAD45981.1| OprF [Pseudomonas fluorescens]
Length = 326
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P+T + + HTDSIG N +SQ RAD +
Sbjct: 218 DVKFDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSIGPDAYNQKLSQRRADRV 277
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
K ++ + + I+ G+ P+ N T+ GR N+R+E
Sbjct: 278 KQ-VLVKDGVAPSRITAVGYGESRPVADNATEAGRAVNRRVE 318
>gi|238916758|ref|YP_002930275.1| chemotaxis protein MotB [Eubacterium eligens ATCC 27750]
gi|238872118|gb|ACR71828.1| chemotaxis protein MotB [Eubacterium eligens ATCC 27750]
Length = 266
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
++ S + +D+ I V+ + + + F + L + L +L +
Sbjct: 114 EQSESMAQEIKDKLTASGVADQIEVTAYSKYVMLNVNGGILFDSGKAELTPQALTLLDKV 173
Query: 100 ATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
A L ++ VI I+ HTD++ NN+++S RA + + + S++ +S
Sbjct: 174 ADALIEYDDNVITIEGHTDNVPINTSRYPNNMMLSLYRAYSVFDFFVSDKGFSDKTMSSS 233
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI N T GR N+R+EI++
Sbjct: 234 GRGDAVPIADNGTPEGRAQNRRVEIKV 260
>gi|285017363|ref|YP_003375074.1| ompa family outer membrane protein precursor [Xanthomonas
albilineans GPE PC73]
gi|283472581|emb|CBA15086.1| putative ompa family outer membrane protein precursor [Xanthomonas
albilineans]
Length = 366
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 6/154 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
G ++ +D+ + ++ + ++ L + +L
Sbjct: 213 ADKDDDGDGVNNCDDKCPDSKPGQTVGPDGCPVPVSIDLKGVNFDFNKSTLRPDAIGLLN 272
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
ILN +P + + HTDSIG+ K N +S+ RA V+ YL++ GV ++R G+
Sbjct: 273 EAVGILNSYPDLKVQVAGHTDSIGSDKYNQKLSERRARVVYDYLVKHGVDASRLDGPIGY 332
Query: 158 AYKYPIDTN------DTKVGRQNNQRIEIQIFPR 185
PI N D GR N+R E+ + +
Sbjct: 333 GKTRPIAPNTNPDGSDNPEGRAKNRRTELNVENK 366
>gi|78223923|ref|YP_385670.1| OmpA/MotB [Geobacter metallireducens GS-15]
gi|78195178|gb|ABB32945.1| OmpA/MotB [Geobacter metallireducens GS-15]
Length = 398
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + +QD V + L+ L IA IL FP
Sbjct: 267 IERKLLAFIQDGARPVDKTTW---FTFDRLQFETGSAVLKPSSQEQLGNIAAILKAFPQV 323
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I I +TD++G + NL +S++RA L++ G+ +R S G+ ++P+ N T+
Sbjct: 324 AIKIGGYTDNVGDPQANLKLSRDRASNTMQELVKLGIDPSRLES-EGYGEEHPVADNATE 382
Query: 170 VGRQNNQRIEIQIFPR 185
GRQ N+RI++++ +
Sbjct: 383 EGRQQNRRIDVRVTKK 398
>gi|89073143|ref|ZP_01159682.1| flagellar motor protein [Photobacterium sp. SKA34]
gi|89051096|gb|EAR56553.1| flagellar motor protein [Photobacterium sp. SKA34]
Length = 307
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 6/173 (3%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+G + KK + ND ++ + + ++ D I + +G +
Sbjct: 119 AGKLTGGQSKKTATQNNENDESEADQMQEKLKEVLTKALEREISDKIIEIENLGQQLVIR 178
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLIS 130
I SF FL+ KF P+++ +A ++ P I + HT S ++N +S
Sbjct: 179 IREKGSFPEGSAFLQPKFKPLVRQVAMLVKDVPGI-IRVTGHTASDKLDSELYRSNWDLS 237
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA + + + + + V G A PI N T+ G+ N+R+EI I
Sbjct: 238 AQRAVSVAQEMEKVEGFDHTKMRVIGLADTQPIADNKTQDGKAKNRRVEISII 290
>gi|330899613|gb|EGH31032.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 133
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ +TG+ V R GD I +P +++F + F L +A+ L +F I I +
Sbjct: 1 MANTGVEVQRQGDQIKLIMPGNITFATDSSAIASSFYSPLNNLASSLKQFNQNNIEIVGY 60
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS G+ ++N+ +SQ+RA + +YL + +SVRG PI +N GR N+
Sbjct: 61 TDSTGSRQHNMDLSQQRAQSVATYLTSQ-GVDQAHLSVRGAGPDQPIASNADVNGRAQNR 119
Query: 177 RIEIQIFP 184
R+E+ + P
Sbjct: 120 RVEVNLKP 127
>gi|167644957|ref|YP_001682620.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
gi|167347387|gb|ABZ70122.1| OmpA/MotB domain protein [Caulobacter sp. K31]
Length = 190
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 3/184 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+ + ++SGC K +V + + K E +
Sbjct: 8 MMMVASALVVGGLSVSGCATKGFVKDQVAVVNTRVDGTDAKLGEVDRTSQEALKRATDAG 67
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDS 119
+ + ++ L + L A+ L + + IQ TD+
Sbjct: 68 KLAEGKFLY-SVVLSDDSVKFPLNRHELSPEAEQRLADFASKLKGDNKNVYLEIQGFTDA 126
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G + N + ERA+ ++ +L ++GV NR ++ + P+ ND GR N+R+
Sbjct: 127 SGDPQYNETLGSERAETVRKFLSKQGVPLNRMATIS-YGEDDPVAPNDNPDGRAQNRRVV 185
Query: 180 IQIF 183
IQ+
Sbjct: 186 IQVL 189
>gi|329945590|ref|ZP_08293324.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328528682|gb|EGF55644.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 321
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 55/144 (38%), Gaps = 1/144 (0%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIA 100
S+ D E D G +T + V F L + L+ A
Sbjct: 143 DTESTPDPVALETFTASVDGASDTRVTGKSVTITLASDVLFDSDSADLSAQADTTLKKAA 202
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L+ +P + I HTD + +N +SQ RA + L Q S +SV G
Sbjct: 203 DQLSTYPGGQVTIVGHTDDVADDAHNQDLSQRRAQAVSDRLGQLASMSAYSVSVSGKGES 262
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFP 184
P ND+ RQ N+R+EI + P
Sbjct: 263 EPRVPNDSDENRQLNRRVEITLVP 286
>gi|254000099|ref|YP_003052162.1| peptidoglycan-associated lipoprotein [Methylovorus sp. SIP3-4]
gi|313202058|ref|YP_004040716.1| peptidoglycan-associated lipoprotein [Methylovorus sp. MP688]
gi|253986778|gb|ACT51635.1| peptidoglycan-associated lipoprotein [Methylovorus sp. SIP3-4]
gi|312441374|gb|ADQ85480.1| peptidoglycan-associated lipoprotein [Methylovorus sp. MP688]
Length = 178
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 69/182 (37%), Gaps = 9/182 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L S+ + ++ C + V KS ++ S+ +Q+
Sbjct: 1 MNKSLVTSVLLAMMLAACSSKPVKNAPVVEDKSPAQTTTSQSSDSAS-------TSGVQN 53
Query: 61 TGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + V+ + D + ++ ++ ++ A L + P + +Q +TD
Sbjct: 54 SSMSVNPLTDPNNILSKRSVYFDFDKDEVKPEYRDLVNAHAKYLVEHPDAKVILQGNTDE 113
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + Q RA +K ++ S++ I + + P + N+R +
Sbjct: 114 RGTREYNLALGQRRAVAVKQ-VLNLQGVSDKQIETISYGEEKPQAAGSDEAAYSKNRRAD 172
Query: 180 IQ 181
I
Sbjct: 173 IV 174
>gi|113971062|ref|YP_734855.1| flagellar motor protein MotB [Shewanella sp. MR-4]
gi|114048292|ref|YP_738842.1| flagellar motor protein MotB [Shewanella sp. MR-7]
gi|117921338|ref|YP_870530.1| flagellar motor protein MotB [Shewanella sp. ANA-3]
gi|113885746|gb|ABI39798.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
gi|113889734|gb|ABI43785.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
gi|117613670|gb|ABK49124.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 306
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 7/177 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G AS ++ + + + K E ++ D I + +G I I
Sbjct: 124 GEASATAQETADAVKAEAAAAQDKINQQVKKMAQELNNEITDGAIEIESLGQQIIIRIRE 183
Query: 79 HVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQER 133
SF S FL+ +F P+++ + +L P I + +TD + +N +S +R
Sbjct: 184 KGSFASGSGFLQPRFKPVVRSVGELLKDVPGI-ITVSGYTDDMQISDELYSSNWDLSSKR 242
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + L+Q + + V G A PI ND+ R N+R+EI I +G K+
Sbjct: 243 AVAVADVLLQVKGFDPKRMKVVGMASNNPIVPNDSPENRARNRRVEIAI-EQGKAKE 298
>gi|311992352|gb|ADQ26749.1| MotB-1 [Aeromonas hydrophila]
Length = 298
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQDTGIVVSRIGDMIT 73
++G S EK + + ++L KA D+ + Q+QD I V +G I
Sbjct: 109 LAGGHDKSEEKLVGGDTQQEAQKQQQQEQSNALAKALADQMKAQIQDGAIEVEALGQQII 168
Query: 74 CYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLL 128
I +F FL+ +F P+++ +A +L P I + HTD ++N
Sbjct: 169 IRIREKAAFPAGSAFLQPQFWPVVRKVAALLKDVPG-EITVSGHTDDAATEDELFQSNWE 227
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S +RA + +I+ + V+G A P+ N + R+ N+R+EI I
Sbjct: 228 LSSQRAVAVAHQMIKVPGFDGGRLVVQGMADSQPLVPNTSPENRRMNRRVEISIM 282
>gi|289675211|ref|ZP_06496101.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
gi|330896025|gb|EGH28248.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
gi|330936859|gb|EGH41006.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
gi|330975430|gb|EGH75496.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 260
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 68/180 (37%), Gaps = 13/180 (7%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYI 76
+ ++ ++ +S D+A+ + + + +
Sbjct: 82 TNQRIELAKQTIALRTSEAALQNASADRAKARLEARDAQIAALKNSLNAKQTERGTLVTF 141
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ L+ + +A L + P + ++ +TDS G+ N +S+ RA+
Sbjct: 142 GDVLFDYNKAELKPTAQGDIGKLAGFLQENPDRKVIVEGYTDSTGSASYNQSLSERRANS 201
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-------PRGNIK 189
+ + R I G+ +YP+ N + GR N+R+E+ I PR ++K
Sbjct: 202 V-RMALVRMGVDPARIVTMGYGKEYPVADNSSNSGRAMNRRVEVTISNDNQPVAPRSSMK 260
>gi|153833224|ref|ZP_01985891.1| outer membrane protein OmpA [Vibrio harveyi HY01]
gi|148870495|gb|EDL69410.1| outer membrane protein OmpA [Vibrio harveyi HY01]
Length = 326
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L L LN++P + I +TDS G N +S+ RA +
Sbjct: 211 SGTFEFDSAKLTDSVSERLDNFVNFLNEYPQAQVEITGYTDSSGPAAYNQKLSERRAQAV 270
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YLI G+ ++R +V G + P+ N T GR+ N+R+E+ +
Sbjct: 271 ADYLIAAGIDADR-FTVTGMGEENPVADNSTHEGREQNRRVEVVV 314
>gi|262197216|ref|YP_003268425.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262080563|gb|ACY16532.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 374
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ +L +AT+L P + I+ HTDS G+ + N+ +SQ RA+
Sbjct: 267 QTIYFETGKNTIKPVSFALLNEVATVLTDNPEIEVRIEGHTDSRGSAEFNMELSQSRAES 326
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++S+LI +GV +R + +G+ PI N+T+ G+ N+R+E I R
Sbjct: 327 VRSFLIDKGVDGDR-LEAKGYGESAPIANNNTRAGQAQNRRVEFVIVSR 374
>gi|189426486|ref|YP_001953663.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
gi|189422745|gb|ACD97143.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
Length = 280
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 62/165 (37%), Gaps = 7/165 (4%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
++ + + ++ + A E Q + +S + + F
Sbjct: 100 RQGNVGGGAGSRQMAGEKEFREMASAIEAYLVKQGFQNKVALSITQRGLVISLKEAGFFD 159
Query: 84 -SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIK 138
L+ + + L+ IA L+++ + ++ HTDS+ N +S RA +
Sbjct: 160 SGSAKLKSESIQTLRGIADTLSRYAN-RFRVEGHTDSMPIRSTEFRSNWELSTARATNVI 218
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+LI S +S G+ P+ N T R N+R++I +
Sbjct: 219 HFLIDSAGFSPESLSAVGYGEFQPVVDNSTAEQRAKNRRVDIVLL 263
>gi|119775566|ref|YP_928306.1| flagellar motor protein MotB [Shewanella amazonensis SB2B]
gi|119768066|gb|ABM00637.1| sodium-driven polar flagellar protein PomB [Shewanella amazonensis
SB2B]
Length = 312
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 75/175 (42%), Gaps = 7/175 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
AS ++ +D+ + + K ++ ++ D I + +G I I
Sbjct: 128 ASSTAQETAESTQSDSSSSQELINQQVKKMAEQLNEEIVDGAIEIESLGQQIIIRIREKG 187
Query: 81 SFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERAD 135
+F S FL+ +F P+++ + +L P I + +TD + +N +S +RA
Sbjct: 188 AFGSGSGFLQPRFRPVIRAVGELLKDVPGI-ITVSGYTDDMQISNELYSSNWDLSSKRAV 246
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ L++ + + V G P+ N++ R N+R+EI I +G K+
Sbjct: 247 SVAHELVKVKGFDSSRMKVVGMGSNNPLVPNESAENRARNRRVEIAI-EQGKPKE 300
>gi|237803660|ref|ZP_04591245.1| OprF [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331025642|gb|EGI05698.1| OprF [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 344
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 69/173 (39%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + +D N ++DK D + V G +
Sbjct: 178 GGSKKVEAAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVR 231
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
++ ++ ++ +A + ++PST ++ HTDS+G N +S+ RA
Sbjct: 232 VELDVKFDFNKSVVKPNSYGDIKNLADFMQQYPSTTTTVEGHTDSVGPDAYNQKLSERRA 291
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +K L+ + ++ G+ P+ N T+ GR N+R+E Q+ +
Sbjct: 292 NAVKQVLVNQYGVGAGRVNSVGYGESRPVADNATEAGRAVNRRVEAQVEAQAK 344
>gi|253700958|ref|YP_003022147.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251775808|gb|ACT18389.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 222
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 33/218 (15%)
Query: 1 MIKELGLSMFIMTTISGCGLAS----------------------------REKKKVFLHK 32
M + G+ + + +GC K
Sbjct: 1 MKRIAGVIVILCAFAAGCATNPDGSREYKRTGIGALAGAALGAGTGALFGGNKGSHAAIG 60
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKK 91
+ +V G+ +D+ + L + V R G+ I +P + F ++ L+
Sbjct: 61 AGAGALVGGAIGNYMDRQAVALKKNLPE--AQVERQGEKIYVTLPSGILFDKNKDLLKPA 118
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F+ L A+ L + T I IQ HTDS G+ NL +SQ RAD ++ YL+ +GV ++R
Sbjct: 119 FMESLARAASSLRE-SQTDIIIQGHTDSSGSDAINLPLSQRRADRVRDYLVAQGVPTSRL 177
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
I++ G+ P ND++ R N+R++++I P +K
Sbjct: 178 IAI-GYGATRPQFPNDSEANRLLNRRVQLEISPNSALK 214
>gi|196248997|ref|ZP_03147697.1| OmpA/MotB domain protein [Geobacillus sp. G11MC16]
gi|196211873|gb|EDY06632.1| OmpA/MotB domain protein [Geobacillus sp. G11MC16]
Length = 191
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 5/166 (3%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV- 83
+++ + + +K + Q + S + + I + F
Sbjct: 15 QEREKQPSPAMSQKEKEGLAQVKEKIDVYIQENKLGGKLQTSLTEEGLAITILDDILFDS 74
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKS 139
+ K + +A +L P + I HTD++ +N +S RA
Sbjct: 75 GSAEVRMKDRRLASEVAALLVMNPPRNVIISGHTDNVPIHNAQFASNWELSVMRAVNFMK 134
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L++ R+ S +G+ PI +N+T GR N+R+EI I PR
Sbjct: 135 VLLENKQLDPRYFSAKGYGEYKPIASNETAAGRMKNRRVEILILPR 180
>gi|91787475|ref|YP_548427.1| OmpA/MotB [Polaromonas sp. JS666]
gi|91696700|gb|ABE43529.1| OmpA/MotB [Polaromonas sp. JS666]
Length = 227
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 35/218 (16%)
Query: 2 IKELGL-----SMFIMTTISGCGLASREKKKVFL---------------HKSNDTDIVNK 41
+ +L + + + +SGC S ++ +
Sbjct: 7 MNKLAITALTSAALAIGGLSGCANMSETQQDTAKGAGIGALAGAVLGAATGGSKGAATGA 66
Query: 42 R------------FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVF 87
+ + + + + TG+ VS+ + + IP V V
Sbjct: 67 VLGGAVGAGGGYIWSKKMQEQKAAMERATAGTGVAVSQTPDNRLKLDIPSDVSFDVGRAA 126
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ F P+L AT LN+ T + I HTDS G+ N +S +RA+ + YL+ RGV+
Sbjct: 127 IKPNFAPILNQFATSLNQNQVTTVTIIGHTDSTGSDAINNPLSVDRANAARDYLVSRGVA 186
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
R I+ G + P+ N+T+ GR N+R+EI + +
Sbjct: 187 RTR-IATDGRGSREPVADNNTQQGRDKNRRVEIYVAEQ 223
>gi|126730426|ref|ZP_01746237.1| OmpA domain protein [Sagittula stellata E-37]
gi|126709159|gb|EBA08214.1| OmpA domain protein [Sagittula stellata E-37]
Length = 718
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 65/192 (33%), Gaps = 16/192 (8%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L+ ++ G + V + + + + L E V
Sbjct: 411 TLAGLEALSMLANGSITVTPDDVIVTGQTGNQEASAQIATLLAGKLGE-NATFDINVTYV 469
Query: 66 SRIGDMITCYIPVHV--------------SFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
R+ + P L+ +L +A +L +
Sbjct: 470 ERLDPTLGIPTPEQCVGMIKEVVGTRKINFEPGSATLDISARDILDELADLLKTCGDIPL 529
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I HTDS G N +S++RA + L R V R V+G+ PI NDT+ G
Sbjct: 530 EIGGHTDSQGRESMNQQLSRDRAQSVLDALRGRRVPV-RMYEVKGYGEAQPIADNDTEEG 588
Query: 172 RQNNQRIEIQIF 183
R+ N+RIE ++
Sbjct: 589 REANRRIEFKLL 600
>gi|257459102|ref|ZP_05624221.1| outer membrane fibronectin-binding protein [Campylobacter gracilis
RM3268]
gi|257443487|gb|EEV18611.1| outer membrane fibronectin-binding protein [Campylobacter gracilis
RM3268]
Length = 340
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G+VV G + + V+F + +F+ ++ ++ +L P + ++ HTDS
Sbjct: 217 AGVVVDEYGCEKVIRLNLGVNFATDSSKISPEFMNQIKNVSDVLVAHPDYKVILEGHTDS 276
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ N +S+ RA + ++ I+ G+ PI TN TK GR N+R++
Sbjct: 277 TGSNAYNQKLSERRAAAVG-GALKSFGVDASRITTVGYGETKPIATNATKAGRAQNRRVD 335
>gi|152983975|ref|YP_001346830.1| outer membrane protein [Pseudomonas aeruginosa PA7]
gi|150959133|gb|ABR81158.1| probable outer membrane protein [Pseudomonas aeruginosa PA7]
Length = 261
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 65/157 (41%), Gaps = 3/157 (1%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+S + +R + LD + + + + + + + L+
Sbjct: 98 AESQLQNASAQRAQARLDARTAQLDK--LRSQLNAKQTSRGTMVTFGDVLFDLDKSDLKP 155
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+ +Q +A L + P + ++ +TDS G+ N +S+ RAD + + S
Sbjct: 156 GAMRNIQQLAEFLQQNPERQVIVEGYTDSTGSANYNQRLSERRADSV-RMALLSRGISPE 214
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ RG+ +YP+ +N T GR N+R+E+ I
Sbjct: 215 RVATRGYGKEYPVASNGTSSGRAMNRRVEVTISNDAK 251
>gi|330958963|gb|EGH59223.1| OprF [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 344
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 69/173 (39%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + +D N ++DK D + V G +
Sbjct: 178 GGSKKVEAAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVR 231
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
++ ++ ++ +A + ++PST ++ HTDS+G N +S+ RA
Sbjct: 232 VELDVKFDFNKSVVKPNSYGDIKNLADFMQQYPSTTTTVEGHTDSVGPDAYNQKLSERRA 291
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +K L+ + ++ G+ P+ N T+ GR N+R+E Q+ +
Sbjct: 292 NAVKQVLVNQYGVGAGRVNSVGYGESRPVADNATEAGRAVNRRVEAQVEAQAK 344
>gi|194366890|ref|YP_002029500.1| peptidoglycan-associated lipoprotein [Stenotrophomonas maltophilia
R551-3]
gi|194349694|gb|ACF52817.1| peptidoglycan-associated lipoprotein [Stenotrophomonas maltophilia
R551-3]
Length = 172
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 19/188 (10%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L +S+ + ++GC +E+ + + T S L
Sbjct: 1 MNKSTRVLLVSLLSVAVLAGCSKKVKEEPQAPVDTGTSTTTPTGPSTSGL---------- 50
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + + ++ +F ++ A L PS+ I +Q HT
Sbjct: 51 -----YGPGDLDTDACLRQRVVYFDLDKEDVKPEFQAIMACHAKYLRDRPSSRITLQGHT 105
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ N + + R + + S L G S+++ ++V + + P+ T + N+R
Sbjct: 106 DERGSRAYNQALGERRGNGVNSALQANGGSASQ-LTVVSYGEERPVCTESNESCWSQNRR 164
Query: 178 IEIQIFPR 185
+EI +
Sbjct: 165 VEIVYTAQ 172
>gi|84625147|ref|YP_452519.1| outer membrane protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188578417|ref|YP_001915346.1| OmpA family outer membrane protein [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|84369087|dbj|BAE70245.1| outer membrane protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188522869|gb|ACD60814.1| OmpA family outer membrane protein [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 365
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
G ++ +D+ I ++ + ++ L + +L
Sbjct: 216 DDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAISILSEAT 275
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
IL ++P + + HTDS GT N +S+ RA + YL + GV ++R + G+
Sbjct: 276 EILKRYPDLKVEVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGKS 335
Query: 161 YPIDTN------DTKVGRQNNQRIEIQI 182
PI N D GR N+R E+ +
Sbjct: 336 RPIAPNTNPDGSDNPEGRAKNRRTELNV 363
>gi|312130019|ref|YP_003997359.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311906565|gb|ADQ17006.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 412
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + T + V + + + L + L P+ I I+ HTD+
Sbjct: 287 EPQEAVGEQVEESTFKLDKVYFNVGQAQILPESYEQLSQLVQYLKVNPTYKIQIEGHTDN 346
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G + NL +S +RA ++ YLI++G+ ++R I +G+ P+ NDT+ R+ N+R+E
Sbjct: 347 QGDARANLQLSNDRAYNVRQYLIEQGIETSR-IKFKGYGSSKPVSPNDTEENRRKNRRVE 405
Query: 180 IQIFPRG 186
QI
Sbjct: 406 YQIIKEE 412
>gi|161504516|ref|YP_001571628.1| hypothetical protein SARI_02629 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865863|gb|ABX22486.1| hypothetical protein SARI_02629 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 559
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 58/117 (49%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I + + + L+ ML + P +I + HTD+ G+++ N +S
Sbjct: 419 KIVRLDSMSLFDSGKSVLKPGSTKMLVNSLLGIKARPGWLIVVSGHTDNTGSVQLNQTLS 478
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+RA+ +++++ G +V+G+ PI +NDT GR +N+R+EI + P+ +
Sbjct: 479 LQRAEAVRNWMRDTGDVPESCFAVQGYGDSRPIASNDTPDGRAHNRRVEISLVPQAD 535
>gi|89900877|ref|YP_523348.1| OmpA/MotB [Rhodoferax ferrireducens T118]
gi|89345614|gb|ABD69817.1| OmpA/MotB [Rhodoferax ferrireducens T118]
Length = 177
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 68/180 (37%), Gaps = 5/180 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + L + + ++GCG + + + K+ + + GS + +
Sbjct: 1 MKRIFLILAVTALMAGCGSTTNLDEVPVVDKTGTSVLPPGANGSGSAVGKGDVTSV---- 56
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ S I V ++ +F ++++ A L S +AI+ HTD G
Sbjct: 57 DVGASSQNAAIVGGPRVVYFDYDSYVIKPEFQSLIEVHARYLKADKSRKVAIEGHTDERG 116
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ NL + Q+RA+ + + + + F + P + N+R EI+
Sbjct: 117 GREYNLALGQKRAEAV-RSALGLLGVVDSQVEAVSFGKEKPAVQGSDEAAMAKNRRAEIR 175
>gi|312130013|ref|YP_003997353.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311906559|gb|ADQ17000.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 622
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q+ I++++I + + + L+ + T+L + P + I HTD
Sbjct: 499 QELDILLTKIEKENKETLDNIFFDTGSAAIRPESEIELKKVVTLLKENPDLKVEISGHTD 558
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+G K N+ +S +RA+ + ++ + + +G+ P ND+ RQ N+RI
Sbjct: 559 DVGNDKANMNLSIQRANAVVE-YLKGKGIHTQRLVAKGYGESQPKVKNDSDKNRQLNRRI 617
Query: 179 EIQIF 183
E+++
Sbjct: 618 ELKVL 622
>gi|229522162|ref|ZP_04411579.1| outer membrane protein A precursor [Vibrio cholerae TM 11079-80]
gi|229341087|gb|EEO06092.1| outer membrane protein A precursor [Vibrio cholerae TM 11079-80]
Length = 321
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 66/167 (39%), Gaps = 8/167 (4%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY------- 75
+ L S +T + + + Q V+ + +
Sbjct: 147 TDINNDTLRASAETATLGIAYKFGGSEEPAPVVEQRPTEPAPVAAPVEKVAVTKTFTFQH 206
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + L+ + L I LN++P + + HTDS G+ N +S+ RA
Sbjct: 207 LDSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDSTGSEAYNQKLSERRAQ 266
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L +G+ ++R IS +G PI +N T GR+ N+R+E+ I
Sbjct: 267 AVAKALEAQGIDASR-ISAKGLGESSPIASNATAEGREKNRRVELVI 312
>gi|84515980|ref|ZP_01003341.1| OmpA family protein [Loktanella vestfoldensis SKA53]
gi|84510422|gb|EAQ06878.1| OmpA family protein [Loktanella vestfoldensis SKA53]
Length = 218
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
R++ + L + V G+SLD+ +E + L++ + VS G + + +
Sbjct: 55 TVRDRNRAALIGAALGAGVGGGIGNSLDRQAEELRRALRND-VGVSNNGTNLVVVLSQDL 113
Query: 81 SFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
F + + + L ++A L +P + I + HTD++G+ N +S+ RA +
Sbjct: 114 LFATNSTQIGAQSQNDLMIVARSLTNYPDSTINVIGHTDNVGSASFNQDLSERRAQSVAG 173
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L GVS R S+ G PI +N T GRQ N+R+EI I P
Sbjct: 174 VLRSGGVSPGRVRSI-GAGLYQPIASNATAEGRQLNRRVEIIITPN 218
>gi|157164740|ref|YP_001466195.1| outer membrane fibronectin-binding protein [Campylobacter concisus
13826]
gi|112801501|gb|EAT98845.1| outer membrane fibronectin-binding protein [Campylobacter concisus
13826]
Length = 337
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Query: 61 TGIVVSRIGDM--ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G+VV G I + K+ ++ +A + + P + + HTD
Sbjct: 213 AGVVVDERGCEKVIVLRDLDVNFAFDSYKVGPKYAAEIKKVADFMGEHPDYKVVLAGHTD 272
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S+G N +S++RA + ++ IS G+ PI TN TK GR N+R+
Sbjct: 273 SVGAEAYNQKLSEKRAKAVAE-VLAGYGVEKAKISTVGYGELKPIATNKTKEGRAQNRRV 331
Query: 179 E 179
E
Sbjct: 332 E 332
>gi|226328442|ref|ZP_03803960.1| hypothetical protein PROPEN_02336 [Proteus penneri ATCC 35198]
gi|225203175|gb|EEG85529.1| hypothetical protein PROPEN_02336 [Proteus penneri ATCC 35198]
Length = 340
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 53/108 (49%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L+ + +L + P +I I +TD+ G N +S +RA+ ++
Sbjct: 216 LFASGQYKLKNEATKVLVDALINIKAKPGWLIVISGYTDNTGNPDLNQKLSLKRAEAVRD 275
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++I+ + +V+G+ P+ N T GR N+R+EI++ P+ +
Sbjct: 276 WMIKTSDIAPSCFAVQGYGQHQPVADNSTLDGRARNRRVEIRLIPQAD 323
>gi|4580970|gb|AAD24557.1|AF117965_1 OprF [Pseudomonas marginalis pv. marginalis]
Length = 321
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P+T + + HTDS+G N +SQ RAD +
Sbjct: 218 DVKFDFDKAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLSQRRADAV 277
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
K ++ + + ++ G+ P+ N T+ GR N+R+E
Sbjct: 278 KQ-VLVKDGVAPSRVTAVGYGESRPVADNATEAGRAVNRRVE 318
>gi|126173599|ref|YP_001049748.1| flagellar motor protein MotB [Shewanella baltica OS155]
gi|152999879|ref|YP_001365560.1| flagellar motor protein MotB [Shewanella baltica OS185]
gi|160874504|ref|YP_001553820.1| flagellar motor protein MotB [Shewanella baltica OS195]
gi|217974157|ref|YP_002358908.1| flagellar motor protein MotB [Shewanella baltica OS223]
gi|304409470|ref|ZP_07391090.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307303828|ref|ZP_07583581.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|125996804|gb|ABN60879.1| OmpA/MotB domain protein [Shewanella baltica OS155]
gi|151364497|gb|ABS07497.1| OmpA/MotB domain protein [Shewanella baltica OS185]
gi|160860026|gb|ABX48560.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|217499292|gb|ACK47485.1| OmpA/MotB domain protein [Shewanella baltica OS223]
gi|304351988|gb|EFM16386.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306912726|gb|EFN43149.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|315266742|gb|ADT93595.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 310
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G A+ ++V + + + K E ++ D I + +G I I
Sbjct: 126 GEATATAQEVADAVKAEAAAAQDKINQEVKKMAQELNKEITDGAIEIESLGQQIIIRIRE 185
Query: 79 HVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQER 133
+F S FL+ +F P+++ + +L P I + +TD + +N +S +R
Sbjct: 186 KGAFASGSGFLQPRFKPVVRSVGELLKDVPGI-ITVSGYTDDMQISDELYSSNWDLSSKR 244
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + L+Q ++ + V G A PI ND+ R N+R+EI I +G K+
Sbjct: 245 AVAVAHELVQVKGFDSKRMKVVGMASNNPIVPNDSPENRARNRRVEIAI-EQGKAKE 300
>gi|302187874|ref|ZP_07264547.1| ompA family protein [Pseudomonas syringae pv. syringae 642]
Length = 260
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 68/180 (37%), Gaps = 13/180 (7%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYI 76
+ ++ ++ +S D+A+ + + + +
Sbjct: 82 TSQRVELAKQTIALRTSEAALQNASADRAKARLEARDAQIAALKNSLNAKQTERGTLVTF 141
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ L+ + +A L + P + ++ +TDS G+ N +S+ RAD
Sbjct: 142 GDVLFDYNKAELKPTAQGDIGKLAGFLQENPDRKVIVEGYTDSTGSASYNQSLSERRADS 201
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-------PRGNIK 189
+ + R I G+ +YP+ N + GR N+R+E+ I PR ++K
Sbjct: 202 V-RMALVRMGVDPARIVTMGYGKEYPVADNSSNSGRAMNRRVEVTISNDNQPVAPRSSMK 260
>gi|148266343|ref|YP_001233049.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146399843|gb|ABQ28476.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 454
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 57/102 (55%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + + ++ + + + K+P+T I+ HTD++GT + N+ +SQ RA+ + +Y
Sbjct: 223 FDIDKADIRPEYHDEVAKVGDFMKKYPTTTTVIEGHTDNVGTAEYNMGLSQRRAESVVNY 282
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+++ N +S +G+ P+ N T G+Q N+RIE I
Sbjct: 283 LVEKFGIENSRLSAKGYGLTRPVADNSTNEGKQLNRRIEAII 324
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNKFP 107
K + + D V I + + V + ++ ++ + + + K+P
Sbjct: 314 KQLNRRIEAIIDCAFDVKEIQPPERLCMLLQVEFDTGKADIKPQYREEIAKVGDYMKKYP 373
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+T AI+ HTD++G + N+ +SQERA+ + +YL++ +S +G+ + I N+
Sbjct: 374 TTTAAIEGHTDNVGGSEYNMKLSQERAENVVNYLVENFGIERSRLSAKGYGFTRRIAYNN 433
Query: 168 TKVGRQNNQRIEIQI 182
T GRQ N+RI I
Sbjct: 434 TAEGRQKNRRINAVI 448
>gi|311696306|gb|ADP99179.1| OmpA/MotB domain protein [marine bacterium HP15]
Length = 402
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 3/165 (1%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C R + D+D V+ T +
Sbjct: 237 CPDTPRGAEVNSRGCELDSDNDGVVNSKDQCPDTTAGADVDASGCEGVTETIQTFTIEVQ 296
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + ++ +A + + P T++ I H+DS G N +SQ RA+ +
Sbjct: 297 ---FPTNSSVIGNAYDEEIRRVADFMQENPETIVEIAGHSDSRGDADYNQFLSQRRAEAV 353
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L + G+ + PI +N+T GR N+R+E +I
Sbjct: 354 AGRLTGPLGVDPARVEAVGYGEEQPIASNNTADGRAANRRVEARI 398
>gi|255067633|ref|ZP_05319488.1| membrane protein, OmpA family [Neisseria sicca ATCC 29256]
gi|255048107|gb|EET43571.1| membrane protein, OmpA family [Neisseria sicca ATCC 29256]
Length = 546
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 1/140 (0%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILN 104
+ K + + + + F + L+ L +
Sbjct: 403 YIPKLKALMPKDPPPPKPIKPEPVKPVVITLDSLALFETGQFELKNNANKALIGALKAIE 462
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P T I ++ HTD++G +N +S++RA +K +L+ V+G PI
Sbjct: 463 SHPDTRILVEGHTDNVGNPVSNQQLSEKRAQSVKDWLVISSNVPESRFEVKGLGDTKPIA 522
Query: 165 TNDTKVGRQNNQRIEIQIFP 184
N T+ G+ N+R+EI + P
Sbjct: 523 DNQTEEGKAKNRRVEIILIP 542
>gi|294785320|ref|ZP_06750608.1| outer membrane porin F [Fusobacterium sp. 3_1_27]
gi|294487034|gb|EFG34396.1| outer membrane porin F [Fusobacterium sp. 3_1_27]
Length = 396
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
S + + + + F + L + +L+ +A +L + + HTDS + K
Sbjct: 278 SIEANSLLITLDSGILFDVDKYDLRPEAEEVLKNLAIVLKEADIKAFEVDGHTDSDASDK 337
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N ++S+ RA+ +K++L +G+++ I+++G+ PI +NDT G+Q N+R+EI I
Sbjct: 338 HNQILSENRANAVKNFLTSQGITAE--ITIKGYGESRPIASNDTAEGKQKNRRVEIII 393
>gi|146308382|ref|YP_001188847.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145576583|gb|ABP86115.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 261
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 69/166 (41%), Gaps = 6/166 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYI 76
+ ++ +V N+ +S +A+ + + +
Sbjct: 82 TNQRVEVAKQTIALRAAENELKNTSAQRAKALLDARDAQIRKLQDSLNAKQTERGTLVTF 141
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ L+ LP + +A L + P + ++ +TDS+G+ N +S+ RA+
Sbjct: 142 GDVLFDFNKAELKSSALPNVTQLARFLQENPERQVIVEGYTDSVGSASYNQGLSERRAES 201
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ LI R I +G+ +YP+ N + GR N+R+E+ I
Sbjct: 202 VRRALI-RAGVEPTRIVAQGYGKEYPVADNSSDSGRAQNRRVEVTI 246
>gi|288801213|ref|ZP_06406668.1| lipoprotein PG3 [Prevotella sp. oral taxon 299 str. F0039]
gi|288331824|gb|EFC70307.1| lipoprotein PG3 [Prevotella sp. oral taxon 299 str. F0039]
Length = 225
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/209 (21%), Positives = 79/209 (37%), Gaps = 33/209 (15%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS----------------- 45
K + L M +T +S C + L + ++ G
Sbjct: 5 KMITLGMCCLTILS-CQTK---QGTGALIGTGGGAVLGAIIGRIAGNTAVGAAIGGAVGA 60
Query: 46 --------SLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSF-VSEVFLEKKFL 93
+DK E +++ I + + + F ++ L +
Sbjct: 61 GAGAIIGRHMDKVAQETAAKVKSAKIEEVTDANGLKAVKVTFDSGILFSTNKAVLSQTSK 120
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L ATIL + + I HTDS G N+ +S RA + +YL GV+ ++F +
Sbjct: 121 NDLAKFATILKENRDCHVDIYGHTDSTGNDGINIPLSNSRARSVVNYLESCGVTGSQFKN 180
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V+G P+ +N T GRQ N+R+E+ +
Sbjct: 181 VQGKGSSEPVASNSTASGRQQNRRVEVYL 209
>gi|120610159|ref|YP_969837.1| hypothetical protein Aave_1472 [Acidovorax citrulli AAC00-1]
gi|120588623|gb|ABM32063.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
Length = 452
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 62/147 (42%), Gaps = 7/147 (4%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIA 100
+ + ++++ + V+ D + F ++ +++ ++Q IA
Sbjct: 279 AVAPPKPRLRQFLEPEIREGLVEVNDQADRSIVTLRGDGLFDPASTEVKPRYVAVIQRIA 338
Query: 101 TILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ LN+ + + ++D+ +N +SQERA + + L + +R + G
Sbjct: 339 SALNEVSG-KVVVNGYSDNQPIRTARFPSNWHLSQERAQAVAAMLQRTIADGSR-LRAEG 396
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A PI N T GR N+R+EI +
Sbjct: 397 RAESDPIAPNSTPEGRALNRRVEIVLM 423
>gi|28897538|ref|NP_797143.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
gi|153839084|ref|ZP_01991751.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|260364598|ref|ZP_05777200.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
gi|260878297|ref|ZP_05890652.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|260898127|ref|ZP_05906623.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|260901940|ref|ZP_05910335.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|28805750|dbj|BAC59027.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
gi|149747422|gb|EDM58382.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|308086135|gb|EFO35830.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|308090168|gb|EFO39863.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|308106787|gb|EFO44327.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|308115125|gb|EFO52665.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
Length = 319
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I ++ L+ + L + LN+ P + + +TD+ G N +S++RA
Sbjct: 204 TIGTGSFDLNSTTLKPESASKLDNLVAFLNEHPQAKVEVVGYTDTSGAAAYNQKVSEKRA 263
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + L+++G+ ++R I RG PI +NDT+ GRQ N+R+EI +
Sbjct: 264 ESVANALVEKGIDASR-IQARGEGENNPIASNDTREGRQQNRRVEIVV 310
>gi|320354509|ref|YP_004195848.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320123011|gb|ADW18557.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
Length = 212
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 80/209 (38%), Gaps = 34/209 (16%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN----------------------- 40
+ + + T ++ C + V +
Sbjct: 6 RISTGIALATMLTACATNQQTGTAVGAGVGAGVGALLGQAIGHNTTSTLVGAGIGAALGG 65
Query: 41 ---KRFGSSLDKAEDEFQMQLQDT-GIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
+ G+ +D E + + + + R D++T + F + L+
Sbjct: 66 LAGNQIGAYMDNQERALRDAMAQSEAASIRRDQDVLTATFKSDMFFDTNSSQLKPGAYNE 125
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L I +LN +P T I ++ HTD+ G+ + N +S+ RA +K+ L Q+GV+ +R I
Sbjct: 126 LNRITNVLNNYPQTTIRVEGHTDARGSDQYNQQLSERRAMAVKNALAQQGVNPSR-IEAV 184
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G+ PI ++D N+R+ I I P
Sbjct: 185 GYGESQPISSSD-----AMNRRVNIVINP 208
>gi|310819615|ref|YP_003951973.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309392687|gb|ADO70146.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 593
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 13/171 (7%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC +K ++ H+ N + + + V D I
Sbjct: 431 GCPPKDTDKDQLPDHRDNCPNEPGPAANQGCPVQQPQL----------VEIQRDRIEIK- 479
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + +L +A I+ + P I I+ HTD G+ N +SQ+RA+
Sbjct: 480 DKVYFDSDKATILPRSNKLLDQVARIIIEHPELEKIWIEGHTDERGSQDYNRELSQKRAE 539
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
++ YL+ RGV R + +G+ +YP+ +NDT GR N+R+E PR
Sbjct: 540 EVRDYLVTRGVPIGRLV-PKGYGRQYPVASNDTVEGRAANRRVEFLTTPRE 589
>gi|299769114|ref|YP_003731140.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. DR1]
gi|298699202|gb|ADI89767.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. DR1]
Length = 186
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 8/180 (4%)
Query: 2 IKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
IK L L + ++GC +K + G S D A + L
Sbjct: 4 IKYLALPFLSVALVMTGCAS----RKPATTTATGTNPSTVNTSGLSEDAALNA--QNLAG 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V L + LQ A L ++ +A+ HTD
Sbjct: 58 ASSKGVTEANKAALAKRVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER 117
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA ++SYLI + + + + + P++ + + N+R+EI
Sbjct: 118 GTREYNMALGERRAKAVQSYLITN-GVNPQQLEAVSYGKEAPVNAGHDESAWKENRRVEI 176
>gi|115378003|ref|ZP_01465184.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
gi|115364980|gb|EAU64034.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
Length = 636
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 13/171 (7%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC +K ++ H+ N + + + V D I
Sbjct: 474 GCPPKDTDKDQLPDHRDNCPNEPGPAANQGCPVQQPQL----------VEIQRDRIEIK- 522
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + +L +A I+ + P I I+ HTD G+ N +SQ+RA+
Sbjct: 523 DKVYFDSDKATILPRSNKLLDQVARIIIEHPELEKIWIEGHTDERGSQDYNRELSQKRAE 582
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
++ YL+ RGV R + +G+ +YP+ +NDT GR N+R+E PR
Sbjct: 583 EVRDYLVTRGVPIGRLV-PKGYGRQYPVASNDTVEGRAANRRVEFLTTPRE 632
>gi|238790227|ref|ZP_04634002.1| hypothetical protein yfred0001_31620 [Yersinia frederiksenii ATCC
33641]
gi|238721670|gb|EEQ13335.1| hypothetical protein yfred0001_31620 [Yersinia frederiksenii ATCC
33641]
Length = 575
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 56/109 (51%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L+ +L + P +I + HTD G ++N ++S +RA+ ++
Sbjct: 443 SLFDVGQSILKSGSTKVLINALVGIKAKPGWLIVVAGHTDITGDSQSNQILSLKRAESVR 502
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ G +V+G+ P+ +NDT+ GR N+R+EI + P+ +
Sbjct: 503 NWMRDTGDIPESCFAVQGYGESRPLKSNDTEAGRALNRRVEISLVPQAD 551
>gi|221068061|ref|ZP_03544166.1| peptidoglycan-associated lipoprotein [Comamonas testosteroni KF-1]
gi|220713084|gb|EED68452.1| peptidoglycan-associated lipoprotein [Comamonas testosteroni KF-1]
Length = 175
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 66/179 (36%), Gaps = 10/179 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK L L++ + ++GC + K D + ++ G+S + L +
Sbjct: 4 IKRLSLALAVTALVAGCSSGVKLDDKPV-----DGSLSSQGAGTSGQGQSGVSGVDLTGS 58
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + ++ P ++ A + P+ + ++ HTD G
Sbjct: 59 AASKAGPQGVSRI----VYFDFDSYSVKADAQPQIEAHAKFIKANPAAKVQLEGHTDERG 114
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL + Q+RA+ ++ + ++ + + + P + N+R+EI
Sbjct: 115 GREYNLALGQKRAEAVRR-SLGLLGVNDAQVEAVSYGKEKPAAEGHGEDAYAQNRRVEI 172
>gi|328473467|gb|EGF44315.1| outer membrane protein OmpA [Vibrio parahaemolyticus 10329]
Length = 319
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I ++ L+ + L + LN+ P + + +TD+ G N +S++RA
Sbjct: 204 TIGTGSFDLNSTTLKPESASKLDNLVAFLNEHPQAKVEVVGYTDTSGAAAYNQKVSEKRA 263
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + L+++G+ ++R I RG PI +NDT+ GRQ N+R+EI +
Sbjct: 264 ESVANALVEKGIDASR-IQARGEGENNPIASNDTREGRQQNRRVEIVV 310
>gi|255319440|ref|ZP_05360655.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens
SK82]
gi|262379403|ref|ZP_06072559.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens
SH164]
gi|255303508|gb|EET82710.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens
SK82]
gi|262298860|gb|EEY86773.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens
SH164]
Length = 190
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 60/179 (33%), Gaps = 4/179 (2%)
Query: 3 KELGLSMFIM-TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
K L L + I+GC G S D A + +
Sbjct: 5 KYLTLPLLAASLVITGCANRKPTSDVTTTTTPTTAGTSVNTTGLSEDAALNA--QNMAGA 62
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V L + LQ A L ++ +A+ HTD G
Sbjct: 63 SAKGVTAANRAYLAKRVVYFDYDSSDLSNEDYQTLQAHAQFLMANANSKVALTGHTDERG 122
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
T + N+ + + RA ++SYL+ + + + + PI+ + + N+R+EI
Sbjct: 123 TREYNMALGERRAKAVQSYLVTN-GVNPNQLEAVSYGKEMPINPGHDEAAWKENRRVEI 180
>gi|157376457|ref|YP_001475057.1| flagellar motor protein MotB [Shewanella sediminis HAW-EB3]
gi|157318831|gb|ABV37929.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
Length = 325
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 7/177 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ E K +S + + K E ++ D I + +G I I
Sbjct: 143 SKSEAEAKAKSEEESKAQAAAQDQINDEVKKMAQELNKEIVDGAIEIESLGQQIIIRIRE 202
Query: 79 HVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQER 133
+F S FL+ +F P+++ + +L P + + HTD + +N +S +R
Sbjct: 203 KGAFSSGSGFLQPRFKPVIRRVGELLKDVPGI-VTVSGHTDDMRISNELYSSNWDLSSKR 261
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + LI+ R + V G A P+ ND+ R N+R+EI I +G K+
Sbjct: 262 AVAVAHELIRVKGFDQRRMKVVGMANSDPLVANDSPGNRARNRRVEIAI-EQGKPKE 317
>gi|170723276|ref|YP_001750964.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169761279|gb|ACA74595.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 262
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 6/166 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYI 76
+ ++ +V N+ +S +A+ + + + +
Sbjct: 82 TNQRVEVAKQTIALRSAENELKNASAQRAQAKLDARDAQIAKLQDSLNAKQTDRGTLVTF 141
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ L+ LP + +A L + P + ++ +TDS+G+ N +S+ RA
Sbjct: 142 GDVLFDFNKAELKSSALPNVTKLAQFLQENPERKVIVEGYTDSVGSANYNQSLSERRAGA 201
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + R I +G+ +YP+ N + GR N+R+E+ I
Sbjct: 202 V-RMALVRAGVDPARIVAQGYGKEYPVADNSSNSGRAQNRRVEVTI 246
>gi|52421234|ref|YP_087146.1| putative outer membrane protein [Bacteroides fragilis YCH46]
gi|52218755|dbj|BAD51347.1| putative outer membrane protein [Bacteroides fragilis YCH46]
Length = 212
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 70/207 (33%), Gaps = 27/207 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSND------------------TDIVNKRF 43
+K+ + + I +S C + D
Sbjct: 1 MKQYYILIVIGALLSACSGTKPITVSHANITAKDKVMICNNSNYSISSIVGIGAEAITYE 60
Query: 44 GSSLDK----AEDEFQMQLQDTGIVVSRIGDMI----TCYIPVHVSFVSEVFLEKKFLPM 95
L K A + + + + + + + L + M
Sbjct: 61 QDYLKKKRFDARVQALKNINGLALTTYKDANGVEQIKAIAQNDILFNFDSFELSSQAQTM 120
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + ++N+ P+T + I HTD++G N+++S+ RA + +Y+ I+
Sbjct: 121 LNQLCVVINEIPNTKVNIIGHTDNVGDKNYNMVLSKNRALSVGNYMRS-SGVDGDNITED 179
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI N T+ GR N+R+EI I
Sbjct: 180 GKGLSSPIADNKTESGRAKNRRVEIYI 206
>gi|28211321|ref|NP_782265.1| chemotaxis motB protein [Clostridium tetani E88]
gi|28203761|gb|AAO36202.1| chemotaxis motB protein [Clostridium tetani E88]
Length = 252
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 67/169 (39%), Gaps = 8/169 (4%)
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
+ + DK + Q + + + + + F ++
Sbjct: 85 VGETTQMGSATGGKENELYDKVKSAVQKSNLQESVKIKSDARGVLLELDDSILFEIAQAD 144
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQ 143
+++ LP+L I I++ P+ + ++ HTD++ +N +S +RA + Y ++
Sbjct: 145 IKQNSLPILDKINKIISTLPN-SVMVEGHTDNVPIKNYKYDSNWELSTQRAVNVLRYFVE 203
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP--RGNIKK 190
+ + + G+ PI NDT R N+R+ I I R +KK
Sbjct: 204 TKKQNPQRFTAAGYGEFKPIHPNDTLENRSKNRRVTIVIVSIDREGLKK 252
>gi|162450796|ref|YP_001613163.1| hypothetical protein sce2524 [Sorangium cellulosum 'So ce 56']
gi|161161378|emb|CAN92683.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
Length = 561
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/176 (22%), Positives = 69/176 (39%), Gaps = 14/176 (7%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY-- 75
C + K D + S+ A+D + ++ G
Sbjct: 368 CPDQPEDFDK---INDADGCPEDDADEDSIPDAKDACPKEPGQPSPEPTKNGCPQFIRRI 424
Query: 76 --------IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNN 126
+ + +L + +L P +AI+ HTD+ G+ + N
Sbjct: 425 TGSSEIQILKQVQFATGSARILPNSYSILDEVVRLLKVNPEITLVAIEGHTDNRGSDQLN 484
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S +RA +++YLI+RG ++ GF K PID N+T+ GRQ N+R+E I
Sbjct: 485 EKLSNDRAHSVRTYLIERGGIDPARLTAAGFGPKRPIDDNNTEAGRQKNRRVEFHI 540
>gi|227873496|ref|ZP_03991745.1| OmpA family membrane protein [Oribacterium sinus F0268]
gi|227840670|gb|EEJ51051.1| OmpA family membrane protein [Oribacterium sinus F0268]
Length = 414
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 68 IGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ + + V F + + +L +AT+L + T I HTDS+ T ++N
Sbjct: 298 EANSLLITLDSGVLFDVDKYDIRPDAEKILNDLATVLKEGGITAFQIDGHTDSMDTDEHN 357
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++S+ RA+ +KSYL +GV++ I+ G+ P+ TNDT GRQ N+R+EI +
Sbjct: 358 QVLSENRANSVKSYLASQGVTAE--ITTHGYGESRPVATNDTAEGRQQNRRVEIIV 411
>gi|189423758|ref|YP_001950935.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
gi|189420017|gb|ACD94415.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
Length = 443
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 75/173 (43%), Gaps = 8/173 (4%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRF--------GSSLDKAEDEFQMQLQDTGIVVS 66
+SGC + + T N R+ G + A E +++ +
Sbjct: 232 VSGCEIQPGIGPVSATGSTVITPAANTRYTLTCSGEGGKTSSTAGVEVTEPVKEESAKKA 291
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ ++K++ L+++ LN+ + I+ HTD++G+ K+N
Sbjct: 292 SAVAAGARLSLKVNFDTGKSIIKKQYYDELKVVGDGLNEQKNLKGVIEGHTDNVGSDKSN 351
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
L +SQ RA+ ++ Y+++ + ++ +G+ PI N T GR+ N+RIE
Sbjct: 352 LALSQRRANAVRDYIVKNFKIDRKRLAAKGYGESKPIADNATAEGREQNRRIE 404
>gi|93005202|ref|YP_579639.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
gi|92392880|gb|ABE74155.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
Length = 392
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 2/164 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ + +D D S+D + + + G V
Sbjct: 213 PNVQTPPIVVVESDLDSDGDGVPDSIDACPGTPMNVVVDERGCPVPVDITDELKMELRVF 272
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-LKNNLLISQERADVIKS 139
+ ++ ++ P + +A + ++P++ ++ H G + N +S+ RA +KS
Sbjct: 273 FDNDKSAIKTQYKPEIAKVAEKMREYPNSTARVEGHASKTGPSARYNQRLSEARAVAVKS 332
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L + +S G+ Y PI N+T+ GR N+R+ I
Sbjct: 333 MLTNEFGIAPNRLSTVGYGYDQPIADNNTEEGRAMNRRVYAIIT 376
>gi|256845382|ref|ZP_05550840.1| outer membrane porin F [Fusobacterium sp. 3_1_36A2]
gi|256718941|gb|EEU32496.1| outer membrane porin F [Fusobacterium sp. 3_1_36A2]
Length = 396
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
S + + + + F + L + +L+ +A +L + + HTDS + K
Sbjct: 278 SIEANSLLITLDSGILFDVDKYDLRPEAEEVLKNLAIVLKEADIKAFEVDGHTDSDASDK 337
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N ++S+ RA+ +K++L +G+++ I+++G+ PI +NDT G+Q N+R+EI I
Sbjct: 338 HNQILSENRANAVKNFLTSQGITAE--ITIKGYGESRPIASNDTAEGKQKNRRVEIII 393
>gi|312962474|ref|ZP_07776965.1| Outer membrane porin F [Pseudomonas fluorescens WH6]
gi|311283401|gb|EFQ61991.1| Outer membrane porin F [Pseudomonas fluorescens WH6]
Length = 326
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P+T + + HTDS+G N +SQ RAD +
Sbjct: 218 DVKFDFDKAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLSQRRADAV 277
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
K ++ + + ++ G+ P+ N T+ GR N+R+E
Sbjct: 278 KQ-VLVKDGVAPSRVTAVGYGESRPVADNATEAGRAVNRRVE 318
>gi|282877937|ref|ZP_06286746.1| OmpA family protein [Prevotella buccalis ATCC 35310]
gi|281299938|gb|EFA92298.1| OmpA family protein [Prevotella buccalis ATCC 35310]
Length = 227
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 74/209 (35%), Gaps = 27/209 (12%)
Query: 1 MIK-ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR----------------- 42
M K + + T+ C + +
Sbjct: 3 MKKMKFMTLALCLLTVFSCSTKQGTGALAGAGGGAALGAIIGKIAGNAGVGAAIGGAVGA 62
Query: 43 -----FGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFVSE-VFLEKKFL 93
G +DK E Q+++ + + + + + F S L +
Sbjct: 63 GAGAMIGRHMDKVAQETAAQVENAKVEEVKDKNGLDAVKVTFDSGILFASSKANLNQTSK 122
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L +T+L I + HTDS G N+ +S +RA + +YL GV S++F +
Sbjct: 123 NELAKFSTVLKNNKDCHIDVYGHTDSTGNDGINIPLSNDRARSVVNYLKSCGVPSSQFQN 182
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V G P+ N TK GRQ N+R+E+ +
Sbjct: 183 VVGQGSTQPVADNATKAGRQLNRRVEVFL 211
>gi|163858421|ref|YP_001632719.1| hypothetical protein Bpet4103 [Bordetella petrii DSM 12804]
gi|163262149|emb|CAP44451.1| OmpA-family protein [Bordetella petrii]
Length = 427
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 7/152 (4%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
I R + + +++D + V D + F + +++LP+
Sbjct: 263 QIAPTRRPAPSPRLAVFLAPEIRDDLVTVRDEVDRSVVVLRGDGLFESGSAEVREQYLPV 322
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRF 151
L +A L + I ++ +TD+I +N +SQ RAD +K L++ + + +
Sbjct: 323 LSRVADALRETQG-NILVRGYTDNIPMRGARYPSNWHLSQARADAVKE-LLEARLDNPQR 380
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ G P+ NDT GR N+R+EI +
Sbjct: 381 VRAEGRGDADPVAPNDTAAGRSRNRRVEITLM 412
>gi|308271281|emb|CBX27889.1| hypothetical protein N47_G32130 [uncultured Desulfobacterium sp.]
Length = 403
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 12/164 (7%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + K D LDK D + G V G + +
Sbjct: 249 CPDTPKGVKVDA--DGCPLDTDGDGVYDYLDKCPDTPK------GASVDSRGCWV---LA 297
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + ++ P+L + I+ K P + IQ HTDS GT K N +S+ RA +
Sbjct: 298 GVYFDTEKWNIVSQYFPVLDNVVGIIKKNPDMKLEIQGHTDSRGTEKYNQKLSENRAKSV 357
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
YL +GV ++ ++ +G+ Y P NDT+ G N+R+E++
Sbjct: 358 LEYLAGKGVVRSK-LTAKGYGYSVPAAPNDTEEGMAKNRRVELK 400
>gi|167585789|ref|ZP_02378177.1| ompA family protein [Burkholderia ubonensis Bu]
Length = 166
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFP 107
+++ TG V+ D + +P V+F + + F P+L +AT LN+ P
Sbjct: 28 IKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPLLNDLATTLNQNP 87
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
++ +TDS G+ N +SQ RA + + + + + +S +G PI N
Sbjct: 88 QVTASVVGYTDSTGSAGLNQTLSQNRAQSVVN-ALTQRGVAGGRLSAQGMGASNPIADNA 146
Query: 168 TKVGRQNNQRIEIQI 182
T+ GR N+R+EI +
Sbjct: 147 TEAGRAQNRRVEIYL 161
>gi|39996116|ref|NP_952067.1| chemotaxis MotB protein [Geobacter sulfurreducens PCA]
gi|39982881|gb|AAR34340.1| chemotaxis MotB protein, putative [Geobacter sulfurreducens PCA]
Length = 289
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 71/176 (40%), Gaps = 10/176 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+R K + + + V + + D D+ + ++ + +S + +T +
Sbjct: 114 AENARLKADIASTQKAKEEQVREVSKTYEDLL-DKMKGEIAQGQVTISELKGKLTVNMVD 172
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG-------TLKNNLLIS 130
+ F + ++ + +LQ + IL I I+ HTD++ N +S
Sbjct: 173 AILFDSGKAEVKPAGMDLLQKVVEILKDVKDKAIRIEGHTDNVQIVGNLAKRFPTNWELS 232
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
RA + +L R +S + +P+ NDT G+ N+RIEI + P+
Sbjct: 233 SARAINVTRFLQSR-GIDPAVLSAVAYGEYHPVAPNDTDEGKAKNRRIEIILVPKD 287
>gi|253699032|ref|YP_003020221.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251773882|gb|ACT16463.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 459
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + + ++ + + + ++P+T I+ HTD++G + NL +S+ RA + Y
Sbjct: 228 FDIDKAEIRPEYKDEVATVGNFMKQYPTTTAVIEGHTDNVGNPEYNLDLSKRRAQSVVDY 287
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + RGF PI N T GRQ N+RIE I
Sbjct: 288 LVDNYGIERSRLEARGFGMARPIAANSTDEGRQANRRIEAII 329
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
+ + + + D V + + + + + ++ + + +
Sbjct: 311 AANSTDEGRQANRRIEAIIDCAFDVKEVQPPDRLCMTLLLEFDSGKADIKPLYRGEMAKV 370
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+NK+P+T I+ HTD++G N+ +SQ+RA+ YL+Q +S +G+ Y
Sbjct: 371 GEYMNKYPTTTAVIEGHTDNVGGSDYNMKLSQQRAENAVQYLVQNFGIDKSRLSAKGYGY 430
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
I N T GR N+RI I
Sbjct: 431 TRRIAYNSTPEGRAKNRRINAVI 453
>gi|284037622|ref|YP_003387552.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283816915|gb|ADB38753.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 241
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ S L + P L + L P VI I HTD++G + N +S
Sbjct: 128 NQAFRLDNVYFDQSSYVLRPESYPQLNKLIKTLVTIPKLVIEIAGHTDNVGDKRLNQALS 187
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ RA +I +YL+ + G+ P NDT+ ++ N+R+E +
Sbjct: 188 ENRAKIITNYLVTN-GIPENRLRHNGYGSSKPAAPNDTEENKRKNRRVEFVVL 239
>gi|330445280|ref|ZP_08308932.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489471|dbj|GAA03429.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 292
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ KK + N+ + ++K + + ++ D I + +G + I
Sbjct: 108 TGGQSKKTATENNENEQEELDKMQNQLKEVLTKALEREISDKVIEIENLGQQVVIRIREK 167
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERA 134
+F FL+ KF P+++ IA ++ P I + HT + ++N +S +RA
Sbjct: 168 GAFPEGSAFLQPKFKPLVRQIALLVKDVPGI-IRVSGHTANDQMDSELYRSNWDLSAQRA 226
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + + + V G A PI N TK GR N+R+EI I
Sbjct: 227 VSVAQEMEKVKGFDHTKMRVVGLADTAPIADNKTKEGRAKNRRVEISIM 275
>gi|261212057|ref|ZP_05926343.1| Flagellar motor rotation protein MotB [Vibrio sp. RC341]
gi|260838665|gb|EEX65316.1| Flagellar motor rotation protein MotB [Vibrio sp. RC341]
Length = 304
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 73/173 (42%), Gaps = 6/173 (3%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
S + + ++++ + + + +++ I V +G I
Sbjct: 114 SAETSVQENQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIR 173
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLIS 130
I +F FL+ KF P+++ IA ++ P + + HTD+ ++N +S
Sbjct: 174 IREKGAFPEGSAFLQPKFRPLVRQIADLVKDIPG-KVRVTGHTDNQKLDSELYRSNWDLS 232
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA + + + ++ + VRG A P+ NDT+ R N+R+EI I
Sbjct: 233 AQRAVSVAQEMEKVKGFDHQRLQVRGMADTQPLGPNDTEAQRTINRRVEISIL 285
>gi|319786286|ref|YP_004145761.1| peptidoglycan-associated lipoprotein [Pseudoxanthomonas suwonensis
11-1]
gi|317464798|gb|ADV26530.1| peptidoglycan-associated lipoprotein [Pseudoxanthomonas suwonensis
11-1]
Length = 170
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 18/177 (10%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L +S+ + ++GC +E+ G
Sbjct: 8 LLVSLLSVAVLAGCSKKVKEQPAAETPAPTTPTAPVASDGRY-----------------G 50
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + L+ +F ++ A L PS I +Q + D G+
Sbjct: 51 PEDLDTDACLRQRTVYFDFDQDALKPEFQAIVGCHAKYLRDRPSARITLQGNADERGSRA 110
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N + + R + + S L G S+++ + V + + P+ T T+ N+R+EI
Sbjct: 111 YNQALGERRGNAVNSALQAAGGSASQ-LEVVSYGEERPVCTESTESCWAQNRRVEIV 166
>gi|4580971|gb|AAD24558.1|AF117966_1 OprF [Pseudomonas mendocina]
Length = 318
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 52/102 (50%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++++ ++ +A +N++P T ++ HTDS+G+ N +S+ RA+ +
Sbjct: 216 DVKFDFDKDRVKEESYGDIKNLADFMNQYPQTTTTVEGHTDSVGSDAYNQGLSERRANAV 275
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
++ L+ + ++ G+ P+ N T GR N+R+E
Sbjct: 276 RNVLVNQYGVDGSRVNAVGYGETRPVADNATDSGRAINRRVE 317
>gi|169795057|ref|YP_001712850.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii AYE]
gi|260556541|ref|ZP_05828759.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC
19606]
gi|332851095|ref|ZP_08433204.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
6013150]
gi|332869632|ref|ZP_08438843.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
6013113]
gi|332875985|ref|ZP_08443771.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
6014059]
gi|169147984|emb|CAM85847.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii AYE]
gi|260409800|gb|EEX03100.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC
19606]
gi|322509070|gb|ADX04524.1| pal [Acinetobacter baumannii 1656-2]
gi|323519051|gb|ADX93432.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii TCDC-AB0715]
gi|332730259|gb|EGJ61584.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
6013150]
gi|332732679|gb|EGJ63911.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
6013113]
gi|332735851|gb|EGJ66892.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
6014059]
Length = 191
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 65/184 (35%), Gaps = 10/184 (5%)
Query: 1 MIKELGLSMF----IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M+K + F ++GC +K + T + + L +
Sbjct: 4 MMKSIKYLAFPLLSAALVMTGCAS-----RKPATTATTGTTNPSTVNTTGLSEDAALNAQ 58
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L + V L + LQ A L ++ +A+ H
Sbjct: 59 NLAGASSKGVTEANKAALAKRVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGH 118
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD GT + N+ + + RA +++YLI + + + + + P++ + + N+
Sbjct: 119 TDERGTREYNMALGERRAKAVQNYLIT-SGVNPQQLEAVSYGKEAPVNPGHDESAWKENR 177
Query: 177 RIEI 180
R+EI
Sbjct: 178 RVEI 181
>gi|258405704|ref|YP_003198446.1| peptidoglycan-associated lipoprotein [Desulfohalobium retbaense DSM
5692]
gi|257797931|gb|ACV68868.1| peptidoglycan-associated lipoprotein [Desulfohalobium retbaense DSM
5692]
Length = 199
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 63/194 (32%), Gaps = 13/194 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQ 59
M+ + + + +GC + + + + T ++ G + + + +
Sbjct: 5 MMWGVLVFTVALLLSAGCAKKQLDTQAGEMGGTETTMQDSQDMGPDGTGQDGMDMETSVS 64
Query: 60 DTGIVVSR-----------IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ V ++ L+ +LQ A +L+ P
Sbjct: 65 EEPKDVDEWEAKESSGAAEEEKALSNLREEIYFDFDSFELKPDARDVLQDKAALLDDNPG 124
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ I+ H D GT + NL + + RA +LI + + + + P
Sbjct: 125 YKMIIEGHCDERGTQEYNLALGERRARAAYEFLILL-GIDANRLQIVSYGEERPAVEGSN 183
Query: 169 KVGRQNNQRIEIQI 182
+ N+R E +I
Sbjct: 184 EAAWAKNRRCEFKI 197
>gi|149375118|ref|ZP_01892890.1| OmpA/MotB domain protein [Marinobacter algicola DG893]
gi|149360482|gb|EDM48934.1| OmpA/MotB domain protein [Marinobacter algicola DG893]
Length = 192
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 60/184 (32%), Gaps = 7/184 (3%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDT-DIVNKRFGSSLDKAEDEFQMQLQDTG 62
+L + + I+GC + D D ++ +
Sbjct: 8 KLFAMVLSLGLIAGCSSTGETTEDGAYGSDVSAVDQDGGSTVYGGDDDGGVSSSEMSEEQ 67
Query: 63 IVVSRIGDMITCY-----IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ I ++ + +L A L P + I+ H
Sbjct: 68 RREAEARAARAEEAAMREITTFYFDFDTAEIKAEAREVLVAHARFLQANPGQNVRIEGHA 127
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + + RA+ I+ +LI G S + ++ + + P ++ N+R
Sbjct: 128 DERGTKEYNLALGERRANAIERFLIVNGASRGQTETIS-YGEEKPAVMGSSESAWAQNRR 186
Query: 178 IEIQ 181
+E+
Sbjct: 187 VELV 190
>gi|83646323|ref|YP_434758.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83634366|gb|ABC30333.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 483
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 69/172 (40%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + + ++ Q D V R D +
Sbjct: 310 AKTREMRVASEKDELMAQQQREDQRKQAITAKFAVVQSLFTDKEADVYRQKDNVLIRAHG 369
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ ++ + ++ I + +FP+ + + HTD+ G+ + N +SQ+RA+ +
Sbjct: 370 FNFPSGKSEIQGENFALVNKIIEAVKEFPNAQVVVSGHTDNRGSTELNQGLSQQRAEEVA 429
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L + G + I+ G+ + P+ TNDT GR +N+R+E+ I G + K
Sbjct: 430 KMLNEIGRIPSDKITAMGYGEQRPVSTNDTMEGRADNRRVEVLIVNEGGVDK 481
>gi|56963749|ref|YP_175480.1| motility protein B [Bacillus clausii KSM-K16]
gi|56909992|dbj|BAD64519.1| motility protein B [Bacillus clausii KSM-K16]
Length = 252
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 67/172 (38%), Gaps = 9/172 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD----TGIVVSRIGDMITCYIP 77
+ + ++ +K S L++ + +++ + + I
Sbjct: 76 DEQARNTLESDPSELSEASKLERSELEQLQARLNGYIEEKQLADRLQTELGASGLLITIN 135
Query: 78 VHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQE 132
+ F L+ + +++ ++ +L P I I HTD++ +N +S
Sbjct: 136 DGILFASGSAELKSDSIELIEQLSAMLASDPPRYIQISGHTDNVPMGNNEFDSNWELSSA 195
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA + + +S G+ +PI +N+T GRQ N+R+E+ + P
Sbjct: 196 RAYNVMKLFFEYDHFEPAQLSFAGYGEYHPITSNETAEGRQANRRVEVLVLP 247
>gi|312884943|ref|ZP_07744633.1| flagellar motor protein MotB [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367420|gb|EFP94982.1| flagellar motor protein MotB [Vibrio caribbenthicus ATCC BAA-2122]
Length = 328
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
+ + + +++ + V +G I I +F FL+ KF P+++ IA ++
Sbjct: 173 ENIKQALEREIEQGAMEVENLGQQIDIRIRERGAFPEGSAFLQPKFRPLVRQIAELVKDI 232
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P V+ + HTD+ ++N +S +RA + + + + + VRG A P
Sbjct: 233 PG-VVRVSGHTDNQPIDSELYRSNWDLSAQRAVSVAQEMEKVRGFKHDRLRVRGMADTEP 291
Query: 163 IDTNDTKVGRQNNQRIEIQIF 183
+ N T+ R N+R+EI I
Sbjct: 292 LGPNKTEAQRALNRRVEISIM 312
>gi|183179549|ref|ZP_02957760.1| outer membrane protein OmpA [Vibrio cholerae MZO-3]
gi|183012960|gb|EDT88260.1| outer membrane protein OmpA [Vibrio cholerae MZO-3]
Length = 321
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ + + + V+ ++ + L+ + L I
Sbjct: 171 GSEEPAPVVEQRPAEPAPVATPVEKVAVTKTFTFQHLDSSTFATASAELKPATVQKLDKI 230
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
LN++P + + HTDS G+ N +S+ RA + L +G+ ++R IS +G
Sbjct: 231 VGYLNQYPQAKVEVVGHTDSTGSEAYNQKLSERRAQAVAKALEAQGIDASR-ISAKGLGE 289
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
PI +N T GR+ N+R+E+ I
Sbjct: 290 SSPIASNATAEGREKNRRVELVI 312
>gi|298372474|ref|ZP_06982464.1| OmpA family outer membrane protein [Bacteroidetes oral taxon 274
str. F0058]
gi|298275378|gb|EFI16929.1| OmpA family outer membrane protein [Bacteroidetes oral taxon 274
str. F0058]
Length = 633
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ + I + + LE K + + + L K P I I HTD+IG
Sbjct: 514 VYLQPIKSGNKITLNNIFFAFNSYELEPKSEREIMQLYSFLRKNPDVSIEIVGHTDNIGG 573
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA + LI++G+ + R + RG PI +N+T+ GR+ N+R+E I
Sbjct: 574 ENFNQTLSENRALAVMMALIEKGIDAGR-LYYRGMGLSQPIASNNTEEGREKNRRVEFVI 632
>gi|223039024|ref|ZP_03609315.1| outer membrane fibronectin-binding protein [Campylobacter rectus
RM3267]
gi|222879663|gb|EEF14753.1| outer membrane fibronectin-binding protein [Campylobacter rectus
RM3267]
Length = 293
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Query: 61 TGIVVSRIGDM--ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G+VV G I + K+L ++ +A + + P I + HTD
Sbjct: 169 AGVVVDETGCEKVIFLRDLDVNFAFDSYKITPKYLEEIKKVAMFMGENPGYRIVLSGHTD 228
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S+GT N +S++RA+ + ++ S I+ G+ PI TN TK GR N+R+
Sbjct: 229 SVGTEAYNQKLSEKRANAVAK-ALEELGVSADKITAIGYGELKPIATNKTKEGRAENRRV 287
Query: 179 E 179
E
Sbjct: 288 E 288
>gi|262368608|ref|ZP_06061937.1| peptidoglycan-associated lipoprotein [Acinetobacter johnsonii
SH046]
gi|262316286|gb|EEY97324.1| peptidoglycan-associated lipoprotein [Acinetobacter johnsonii
SH046]
Length = 189
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 10/184 (5%)
Query: 2 IKELGL----SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-SSLDKAEDEFQM 56
+K + L + ++GC +K ++ + L +
Sbjct: 1 MKSIKLLALPILATALVVTGCAS----RKPAATIEAGQNPNGSTTVNTQGLSEDAALNAQ 56
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L + V L LQ A L ++ +A+ H
Sbjct: 57 NLAGASAKGVTEANKAFLAKRVVHFDYDSSDLSNDDYQTLQAHAQFLMANANSRVALTGH 116
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD GT + N+ + + RA ++S+LI S + + + PI+ + + N+
Sbjct: 117 TDERGTREYNMALGERRAKAVESFLIT-TGVSPNQLEAVSYGKEMPINAGHDENAWKENR 175
Query: 177 RIEI 180
R+EI
Sbjct: 176 RVEI 179
>gi|153213818|ref|ZP_01949026.1| outer membrane protein OmpA [Vibrio cholerae 1587]
gi|229524210|ref|ZP_04413615.1| outer membrane protein A precursor [Vibrio cholerae bv. albensis
VL426]
gi|124115742|gb|EAY34562.1| outer membrane protein OmpA [Vibrio cholerae 1587]
gi|229337791|gb|EEO02808.1| outer membrane protein A precursor [Vibrio cholerae bv. albensis
VL426]
Length = 321
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ + + + V+ ++ + L+ + L I
Sbjct: 171 GSEEPAPVVEQRPAEPAPVAAPVEKVAVTKTFTFQHLDSSTFATASAELKPATVQKLDKI 230
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
LN++P + + HTDS G+ N +S+ RA + L +G+ ++R IS +G
Sbjct: 231 VGYLNQYPQAKVEVVGHTDSTGSEAYNQKLSERRAQAVAKALEAQGIDASR-ISAKGLGE 289
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
PI +N T GR+ N+R+E+ I
Sbjct: 290 SSPIASNATAEGREKNRRVELVI 312
>gi|229513857|ref|ZP_04403319.1| outer membrane protein A precursor [Vibrio cholerae TMA 21]
gi|262192122|ref|ZP_06050283.1| outer membrane protein A precursor [Vibrio cholerae CT 5369-93]
gi|297580859|ref|ZP_06942784.1| outer membrane protein OmpA [Vibrio cholerae RC385]
gi|229349038|gb|EEO13995.1| outer membrane protein A precursor [Vibrio cholerae TMA 21]
gi|262031971|gb|EEY50548.1| outer membrane protein A precursor [Vibrio cholerae CT 5369-93]
gi|297534685|gb|EFH73521.1| outer membrane protein OmpA [Vibrio cholerae RC385]
Length = 321
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ + + + V+ ++ + L+ + L I
Sbjct: 171 GSEEPAPVVEQRPAEPAPVAAPVEKVAVTKTFTFQHLDSSTFATASAELKPATVQKLDKI 230
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
LN++P + + HTDS G+ N +S+ RA + L +G+ ++R IS +G
Sbjct: 231 VGYLNQYPQAKVEVVGHTDSTGSEAYNQKLSERRAQAVAKALEAQGIDASR-ISAKGLGE 289
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
PI +N T GR+ N+R+E+ I
Sbjct: 290 SSPIASNATAEGREKNRRVELVI 312
>gi|256419593|ref|YP_003120246.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256034501|gb|ACU58045.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 671
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + L + L +L + +I+ P+ +I + +HTDS G + N+ +SQ+R
Sbjct: 550 IILKDIYYDFDKATLRPQSLIVLDTVVSIMQDNPNIIIEMSAHTDSKGKDEYNMKLSQKR 609
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQIF 183
A YLI +G+SS R I +G+ PI N D GRQ N+R E ++
Sbjct: 610 AQSCVDYLISKGISSERMI-AKGYGETRPIAPNTLPNGKDNPEGRQLNRRTEFKVL 664
>gi|330950708|gb|EGH50968.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 260
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 74/180 (41%), Gaps = 13/180 (7%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYI 76
+ ++ ++ +S D+A+ + + + +
Sbjct: 82 TNQRIELAKQTIALRTSEAALQNASADRAKARLEARDAQIAALKNSLNAKQTERGTLVTF 141
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ L+ + +A L + P + ++ +TDS G+ N +S+ RA+
Sbjct: 142 GDVLFDYNKAELKPTAQGDIGKLAGFLQENPDRKVIVEGYTDSTGSASYNQSLSERRANS 201
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-------PRGNIK 189
++ L++ GV R ++ G+ +YP+ N + GR N+R+E+ I PR ++K
Sbjct: 202 VRMALVRMGVDPARVVT-MGYGKEYPVADNSSNSGRAMNRRVEVTISNDNQPVAPRSSMK 260
>gi|253681414|ref|ZP_04862211.1| chemotaxis protein MotB [Clostridium botulinum D str. 1873]
gi|253561126|gb|EES90578.1| chemotaxis protein MotB [Clostridium botulinum D str. 1873]
Length = 242
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 72/195 (36%), Gaps = 12/195 (6%)
Query: 7 LSMFIMTTISGCGLAS------REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+S + + +SG S + + + K ++ +
Sbjct: 49 ISSSLQSVLSGSNSNSILDFNPNGEVPIVGPPQEMGPKSGGGNEAMYSKVKEFMDKNKLN 108
Query: 61 TGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V R I + ++ F S + ++ +L I+ +L P+ I I+ HTD+
Sbjct: 109 NTVQVKRDAKGIIIELKDNILFDSAQAEIKTPSKEILDKISNLLESVPNG-IIIEGHTDN 167
Query: 120 IGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ +N +S +RA + Y ++ + G+ +PI+ ND + N
Sbjct: 168 VPIHNAKYASNWELSTQRAVNVLKYFVENKGLAPDKFQAAGYGEFHPIEKNDNYANKAKN 227
Query: 176 QRIEIQIFPRGNIKK 190
+R+ I I KK
Sbjct: 228 RRVNILITSGEKEKK 242
>gi|242309709|ref|ZP_04808864.1| cadf [Helicobacter pullorum MIT 98-5489]
gi|239523710|gb|EEQ63576.1| cadf [Helicobacter pullorum MIT 98-5489]
Length = 308
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ P +Q A + + P I HTDS G+ N +S+ RA +
Sbjct: 201 SVQFPSDSSSVNPEYYPEIQDFAEYMKQNPDKTATISGHTDSTGSEAYNQKLSERRAISV 260
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K ++++ S + +G+ + PI TN TK GRQ N+R+E ++
Sbjct: 261 KEEIVKQ-GISPDRLDTKGYGEEKPIATNKTKEGRQANRRVEAEV 304
>gi|88800186|ref|ZP_01115754.1| peptidoglycan-associated lipoprotein [Reinekea sp. MED297]
gi|88777032|gb|EAR08239.1| peptidoglycan-associated lipoprotein [Reinekea sp. MED297]
Length = 188
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 70/180 (38%), Gaps = 4/180 (2%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
M + CG + + + + D E ++ + V
Sbjct: 8 TAAVMSSALVLVACGGNTDDTDQGSTTTTEPAVEEVDTLELETDDESIELVVEDVEPVAV 67
Query: 65 VSRIGDMI---TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + + + + + +F+ ML + L P+ ++ ++ H D G
Sbjct: 68 IEDAAEDVYNELLDLTLVYFDFDKSVIRPEFIDMLNAHSEFLVANPTQMVVLEGHADERG 127
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
T + NL + + RA + +YL+ +GVS+ + +V + + P+ T+ N+R+EI
Sbjct: 128 TREYNLALGERRAKQVATYLMVQGVSAAQIDTVS-YGEEKPLAIGKTEAEYSQNRRVEIV 186
>gi|66044564|ref|YP_234405.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|63255271|gb|AAY36367.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
Length = 260
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 68/180 (37%), Gaps = 13/180 (7%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYI 76
+ ++ ++ +S D+A+ + + + +
Sbjct: 82 TNQRVELAKQTIALRTSEAALQNASADRAKARLEARDAQIAALKNSLNAKQTERGTLVTF 141
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ L+ + +A L + P + ++ +TDS G+ N +S+ RA+
Sbjct: 142 GDVLFDYNKAELKPTAQGDIGKLAAFLQENPDRKVIVEGYTDSTGSASYNQSLSERRANS 201
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-------PRGNIK 189
+ + R + G+ +YP+ N + GR N+R+E+ I PR ++K
Sbjct: 202 V-RMALVRMGVDPARVVTMGYGKEYPVADNTSNSGRAMNRRVEVTISNDNQPVAPRSSMK 260
>gi|307728583|ref|YP_003905807.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307583118|gb|ADN56516.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 620
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 48/106 (45%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L +L ++ P + + HTDS+GT +NL +S+ RA ++
Sbjct: 488 SLFRSGSAVLNPGSNRVLIGALEMIKAHPDKRVLVAGHTDSVGTPASNLKLSEARAASVR 547
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+L + +++G+ P N T+ GR N+R+EI + P
Sbjct: 548 DWLADASGIALTRFAIQGYGDTRPKAPNSTEAGRAANRRVEITLVP 593
>gi|148265913|ref|YP_001232619.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146399413|gb|ABQ28046.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 287
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 10/173 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ K+ + K + V K + D E + + ++ + +S + +T + V
Sbjct: 117 AKLKEDIASLKKAKEEEVQKTSKTYEDLLE-KMKSEISQGQVTISELKGKLTVNMVDAVL 175
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-------LKNNLLISQER 133
F + ++ L +LQ + IL I I+ HTD++ N +S R
Sbjct: 176 FDSGKAEVKPDGLVVLQKVIDILKNIKDKSIRIEGHTDNVSIVGALAKKYPTNWELSAAR 235
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
A + +Q+ ++ + P+ NDT G+ N+RIEI + P+
Sbjct: 236 AINVTR-YLQQQGIDPTNLAAIAYGEFKPVAGNDTPEGKAKNRRIEIILVPKE 287
>gi|253997300|ref|YP_003049364.1| OmpA/MotB domain-containing protein [Methylotenera mobilis JLW8]
gi|253983979|gb|ACT48837.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8]
Length = 217
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 48 DKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNK 105
++ + + + TG+ V++ + + IP + V ++ F +L AT L
Sbjct: 76 EEQKRQMEEATAGTGVGVTQTADNRLKLDIPSDISFDVGRADIKANFRAVLDTFATSLVN 135
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P++ + + HTD+ G+ N +S RA ++ Y++ RGV +R I++ G + P+
Sbjct: 136 NPASNVTVIGHTDNTGSDAVNNPLSVNRAASVRDYVVARGVQHSR-ITIEGRGAREPLVA 194
Query: 166 NDTKVGRQNNQRIEIQI 182
NDT R N+R+EI +
Sbjct: 195 NDTAANRAKNRRVEIFV 211
>gi|24375768|ref|NP_719811.1| flagellar motor protein MotB [Shewanella oneidensis MR-1]
gi|24350713|gb|AAN57255.1|AE015861_7 chemotaxis motB protein [Shewanella oneidensis MR-1]
Length = 275
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 69/173 (39%), Gaps = 7/173 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A+ + N + + + ++++ + + + D + I +
Sbjct: 95 TATTAPSTSESNNDLTNAKSNDTIRKYKEIISAKLKNEIENQEVEIDEVSDNLIIRIGDN 154
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS---IGTLKNNLLISQERA 134
F++ KF+P++ I ++ P + I HTD+ + +N +S RA
Sbjct: 155 NTFFASGSAFIQPKFIPLIDKIGEVIASVPG-RVVIAGHTDATLPMEIYADNWDLSSLRA 213
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ + + + I V+G A P NDT RQ N+RIEI I +GN
Sbjct: 214 TAVVRIMTKNKGVNPSRIIVQGLADTQPRFQNDTPEHRQKNRRIEI-ILNQGN 265
>gi|262278151|ref|ZP_06055936.1| peptidoglycan-associated lipoprotein [Acinetobacter calcoaceticus
RUH2202]
gi|262258502|gb|EEY77235.1| peptidoglycan-associated lipoprotein [Acinetobacter calcoaceticus
RUH2202]
Length = 190
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 8/180 (4%)
Query: 2 IKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
IK L L + ++GC +K + G S D A + L
Sbjct: 8 IKYLALPFLSVALVMTGCAS----RKPAATTATGTNPSTVNTSGLSEDAALNA--QNLAG 61
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V L + LQ A L ++ +A+ HTD
Sbjct: 62 ASSKGVTEANKAALAKRVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER 121
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA ++SYLI + + + + + P++ + + N+R+EI
Sbjct: 122 GTREYNMALGERRAKAVQSYLITN-GVNPQQLEAVSYGKEAPVNAGHDESAWKENRRVEI 180
>gi|312879597|ref|ZP_07739397.1| OmpA/MotB domain protein [Aminomonas paucivorans DSM 12260]
gi|310782888|gb|EFQ23286.1| OmpA/MotB domain protein [Aminomonas paucivorans DSM 12260]
Length = 242
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 74/198 (37%), Gaps = 11/198 (5%)
Query: 2 IKELGLSM-FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
K++ S + + G + + D NKR + Q +
Sbjct: 46 FKKMMFSFQGALGVLPGGKTIQEDSGVYQGYVGQDAGDANKRTEQFKQGVAQQLQALAER 105
Query: 61 TG----IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
G I V +T + F L +L I IL FP+ +A++
Sbjct: 106 EGLQKEITVKVNQRGVTVSLSEQFLFAPGGADLSPLSRRVLFKIGQILKTFPN-QLAVEG 164
Query: 116 HTDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
HTD+ G K+N +S RA V+ SYL S + G+ PI NDT
Sbjct: 165 HTDNAPLRGGLYKDNWGLSAGRAAVVASYLAGTVGLSPNRLEAVGYGSAKPIVPNDTPEH 224
Query: 172 RQNNQRIEIQIFPRGNIK 189
R N+R+++ + + +++
Sbjct: 225 RALNRRVDLVLLTQHSLR 242
>gi|254286478|ref|ZP_04961435.1| outer membrane protein OmpA [Vibrio cholerae AM-19226]
gi|150423427|gb|EDN15371.1| outer membrane protein OmpA [Vibrio cholerae AM-19226]
Length = 321
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ + + + V+ ++ + L+ + L I
Sbjct: 171 GSEEPAPVVEQRPAEPAPVAAPVEKVAVTKTFTFQHLDSSTFATASAELKPATVQKLDKI 230
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
LN++P + + HTDS G+ N +S+ RA + L +G+ ++R IS +G
Sbjct: 231 VGYLNQYPQAKVEVVGHTDSTGSEAYNQKLSERRAQAVAKALEAQGIDASR-ISAKGLGE 289
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
PI +N T GR+ N+R+E+ I
Sbjct: 290 SSPIASNATAEGREKNRRVELVI 312
>gi|85704529|ref|ZP_01035631.1| hypothetical protein ROS217_05604 [Roseovarius sp. 217]
gi|85670937|gb|EAQ25796.1| hypothetical protein ROS217_05604 [Roseovarius sp. 217]
Length = 321
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 1/152 (0%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
++ + + DK D + I + L+
Sbjct: 169 ATGSEGAVTTGEIITPTDKPAAAALEAEGDFSLEACVGRFDILSRTGNIYFKPASAQLDG 228
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
P+L +A I+ + P I I HTDS G+ N +S+ RA + YL R VS +R
Sbjct: 229 ASGPLLDAVAQIVTRCPDLTIQIAGHTDSFGSAAANQTLSERRAQSVVDYLATRDVSPSR 288
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I G+ P+ N T+ GR+ N+RIE I
Sbjct: 289 LI-ALGYGETRPVADNSTEQGRRENRRIEFSI 319
>gi|330959172|gb|EGH59432.1| ompA family protein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 260
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 74/180 (41%), Gaps = 13/180 (7%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYI 76
+ ++ ++ +S D+A+ + + + +
Sbjct: 82 TNQRVELAKQTIALRTSEAALQNASADRAKARLEARDAQIAALKNSLNAKQTERGTLVTF 141
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ L+ + +A L + P + ++ +TDS G+ N +S+ RA+
Sbjct: 142 GDVLFDYNKADLKPTAQGDIGKLAAFLQENPDRKVIVEGYTDSTGSASYNQSLSERRANS 201
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-------PRGNIK 189
++ L++ GV R ++ G+ +YP+ N + GR N+R+E+ I PR ++K
Sbjct: 202 VRMALVRMGVDPARVVT-MGYGKEYPVADNTSNSGRAMNRRVEVTISNDNQPVAPRSSMK 260
>gi|326316328|ref|YP_004234000.1| type IV / VI secretion system protein, DotU family [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323373164|gb|ADX45433.1| type IV / VI secretion system protein, DotU family [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 450
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIA 100
+ + ++++ + V+ D T + F ++ +++ ++Q +A
Sbjct: 277 AVAPPKPRLRQFLEPEIREGLVEVNDQADRSTVTLRGDGLFEPASTEVKPRYVAVIQRVA 336
Query: 101 TILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ LN+ + + ++D+ +N +SQERA + + L + +R + G
Sbjct: 337 SALNEVSG-KVVVNGYSDNQPIRTARFPSNWHLSQERAQAVAAMLQRTITDGSR-VKAEG 394
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A PI N T GR N+R+EI +
Sbjct: 395 RAESDPIAPNSTPEGRALNRRVEIVLL 421
>gi|85375533|ref|YP_459595.1| outer membrane protein [Erythrobacter litoralis HTCC2594]
gi|84788616|gb|ABC64798.1| outer membrane protein [Erythrobacter litoralis HTCC2594]
Length = 231
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 81/213 (38%), Gaps = 39/213 (18%)
Query: 7 LSMFIMTTISGC---GLASREKKKVFLHKSNDTDIVNK---------------------- 41
L+ + ++S C +K + +
Sbjct: 11 LAAVSLFSVSACVTDPNTGEQKVSRTGIGAAVGGTLGYLLGGVVGGDAARIIGAGIGGTA 70
Query: 42 --RFGSSLDKAEDEFQMQLQDTGIVVSRIGDM--ITCYIPVHVSF-VSEVFLEKKFLPML 96
G D E Q +G+ V +GD I +P V+F + F P L
Sbjct: 71 GAVIGDQFDDQIRELDEQTAGSGVDVEEVGDQDAILVRLPDGVTFASGSARINSAFYPTL 130
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
IA L ++P+++I + TD+ G+ N +S+ RA + YL+ RGV+ +R I+ +G
Sbjct: 131 NEIAESLKRYPNSLIDVYGFTDTTGSDALNQQLSESRAQTVADYLVARGVARSR-IATQG 189
Query: 157 FAYKY-----PIDTNDTKVGRQNNQRIEIQIFP 184
+ + N + N+R+EI+I P
Sbjct: 190 YGERREYLRIQTADNVNE---PLNRRVEIKITP 219
>gi|261417272|ref|YP_003250955.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373728|gb|ACX76473.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 294
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 7/155 (4%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQ------LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ + + DK E LQ I V++ I + + V L+
Sbjct: 136 EAEKQAIKAQKDKLEASKNEAMDKLNALQSQMIQVTKDARGIILSMSDILFDVGRATLKT 195
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+ L IA IL+ + ++I+ +TD+ G+ + N+ +SQ+RA+ + +L+++ +
Sbjct: 196 DLMTSLAKIAGILSVYQQFDVSIEGNTDNTGSEEFNMTLSQQRAENVMKFLVEQ-GIAET 254
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ +G PI N TK GRQ N+R+++ I R
Sbjct: 255 RLTAKGLGMTMPIADNSTKEGRQKNRRVDLVITDR 289
>gi|229528782|ref|ZP_04418172.1| outer membrane protein A precursor [Vibrio cholerae 12129(1)]
gi|229332556|gb|EEN98042.1| outer membrane protein A precursor [Vibrio cholerae 12129(1)]
gi|327484732|gb|AEA79139.1| Outer membrane protein A precursor [Vibrio cholerae LMA3894-4]
Length = 321
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ + + + V+ ++ + L+ + L I
Sbjct: 171 GSEEPAPVVEQRPAEPAPVAAPVEKVAVTKTFTFQHLDSSTFATASAELKPATVQKLDKI 230
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
LN++P + + HTDS G+ N +S+ RA + L +G+ ++R IS +G
Sbjct: 231 VGYLNQYPQAKVEVVGHTDSTGSEAYNQKLSERRAQAVAKALEAQGIDASR-ISAKGLGE 289
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
PI +N T GR+ N+R+E+ I
Sbjct: 290 SSPIASNATAEGREKNRRVELVI 312
>gi|108759418|ref|YP_635012.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108463298|gb|ABF88483.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 543
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 5/169 (2%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
C V DTD LD+ D+ G ++R +
Sbjct: 338 AC---PDVAGPVANMGCPDTDKDGDGVVDRLDRCPDQPAGSRGKDGCPLARRDGNRIVIL 394
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + P+L+ +A ++N+ + ++ HTDS + NL +S+ RA
Sbjct: 395 EQLNFATDQDIILSESFPILEEVARVMNENTEADRVHVEGHTDSRASDAYNLDLSRRRAA 454
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +L++ GV++ R S +GF P+ N T+ G N+R++ I P
Sbjct: 455 SVMRFLVESGVAAERLCS-QGFGRSRPLADNATEEGMALNRRVDFTIQP 502
>gi|15640909|ref|NP_230540.1| flagellar motor protein MotB [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121588125|ref|ZP_01677872.1| chemotaxis protein PomB [Vibrio cholerae 2740-80]
gi|121728326|ref|ZP_01681356.1| chemotaxis protein PomB [Vibrio cholerae V52]
gi|147674334|ref|YP_001216371.1| flagellar motor protein MotB [Vibrio cholerae O395]
gi|153216012|ref|ZP_01950234.1| flagellar motor protein [Vibrio cholerae 1587]
gi|153802297|ref|ZP_01956883.1| chemotaxis protein PomB [Vibrio cholerae MZO-3]
gi|153817212|ref|ZP_01969879.1| chemotaxis protein PomB [Vibrio cholerae NCTC 8457]
gi|153823690|ref|ZP_01976357.1| chemotaxis protein PomB [Vibrio cholerae B33]
gi|153827046|ref|ZP_01979713.1| chemotaxis protein PomB [Vibrio cholerae MZO-2]
gi|153830558|ref|ZP_01983225.1| chemotaxis protein PomB [Vibrio cholerae 623-39]
gi|227081069|ref|YP_002809620.1| chemotaxis protein PomB [Vibrio cholerae M66-2]
gi|229505502|ref|ZP_04395012.1| Flagellar motor rotation protein MotB [Vibrio cholerae BX 330286]
gi|229510828|ref|ZP_04400307.1| Flagellar motor rotation protein MotB [Vibrio cholerae B33]
gi|229513008|ref|ZP_04402474.1| Flagellar motor rotation protein MotB [Vibrio cholerae TMA 21]
gi|229517949|ref|ZP_04407393.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC9]
gi|229523310|ref|ZP_04412717.1| Flagellar motor rotation protein MotB [Vibrio cholerae TM 11079-80]
gi|229525508|ref|ZP_04414913.1| Flagellar motor rotation protein MotB [Vibrio cholerae bv. albensis
VL426]
gi|229530005|ref|ZP_04419395.1| Flagellar motor rotation protein MotB [Vibrio cholerae 12129(1)]
gi|229608521|ref|YP_002879169.1| flagellar motor protein MotB [Vibrio cholerae MJ-1236]
gi|254285566|ref|ZP_04960530.1| chemotaxis protein PomB [Vibrio cholerae AM-19226]
gi|254848028|ref|ZP_05237378.1| flagellar motor protein PomB [Vibrio cholerae MO10]
gi|262191489|ref|ZP_06049674.1| Flagellar motor rotation protein MotB [Vibrio cholerae CT 5369-93]
gi|297581278|ref|ZP_06943202.1| chemotaxis protein PomB [Vibrio cholerae RC385]
gi|298498985|ref|ZP_07008792.1| flagellar motor protein PomB [Vibrio cholerae MAK 757]
gi|9655348|gb|AAF94055.1| chemotaxis protein PomB [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|51241597|emb|CAH17908.1| flagellar motor protein PomB [Vibrio cholerae]
gi|121547616|gb|EAX57715.1| chemotaxis protein PomB [Vibrio cholerae 2740-80]
gi|121629381|gb|EAX61811.1| chemotaxis protein PomB [Vibrio cholerae V52]
gi|124114525|gb|EAY33345.1| flagellar motor protein [Vibrio cholerae 1587]
gi|124122179|gb|EAY40922.1| chemotaxis protein PomB [Vibrio cholerae MZO-3]
gi|126512246|gb|EAZ74840.1| chemotaxis protein PomB [Vibrio cholerae NCTC 8457]
gi|126518793|gb|EAZ76016.1| chemotaxis protein PomB [Vibrio cholerae B33]
gi|146316217|gb|ABQ20756.1| chemotaxis protein PomB [Vibrio cholerae O395]
gi|148873956|gb|EDL72091.1| chemotaxis protein PomB [Vibrio cholerae 623-39]
gi|149739087|gb|EDM53383.1| chemotaxis protein PomB [Vibrio cholerae MZO-2]
gi|150424428|gb|EDN16365.1| chemotaxis protein PomB [Vibrio cholerae AM-19226]
gi|227008957|gb|ACP05169.1| chemotaxis protein PomB [Vibrio cholerae M66-2]
gi|227012713|gb|ACP08923.1| chemotaxis protein PomB [Vibrio cholerae O395]
gi|229333779|gb|EEN99265.1| Flagellar motor rotation protein MotB [Vibrio cholerae 12129(1)]
gi|229339089|gb|EEO04106.1| Flagellar motor rotation protein MotB [Vibrio cholerae bv. albensis
VL426]
gi|229339673|gb|EEO04688.1| Flagellar motor rotation protein MotB [Vibrio cholerae TM 11079-80]
gi|229344664|gb|EEO09638.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC9]
gi|229349901|gb|EEO14855.1| Flagellar motor rotation protein MotB [Vibrio cholerae TMA 21]
gi|229350793|gb|EEO15734.1| Flagellar motor rotation protein MotB [Vibrio cholerae B33]
gi|229357725|gb|EEO22642.1| Flagellar motor rotation protein MotB [Vibrio cholerae BX 330286]
gi|229371176|gb|ACQ61599.1| Flagellar motor rotation protein MotB [Vibrio cholerae MJ-1236]
gi|254843733|gb|EET22147.1| flagellar motor protein PomB [Vibrio cholerae MO10]
gi|262032637|gb|EEY51190.1| Flagellar motor rotation protein MotB [Vibrio cholerae CT 5369-93]
gi|297534594|gb|EFH73431.1| chemotaxis protein PomB [Vibrio cholerae RC385]
gi|297543318|gb|EFH79368.1| flagellar motor protein PomB [Vibrio cholerae MAK 757]
Length = 318
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 6/173 (3%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
S + + ++++ + + + +++ I V +G I
Sbjct: 129 SAETSVQDNQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIR 188
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLIS 130
I +F FL+ KF P+++ IA ++ P + + HTD+ ++N +S
Sbjct: 189 IREKGAFPEGSAFLQPKFRPLVRQIAELVKDIPG-KVRVTGHTDNQKLDSELYRSNWDLS 247
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA + + + + + VRG A P+ NDT+ R N+R+EI I
Sbjct: 248 AQRAVSVAQEMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATNRRVEISIL 300
>gi|254230148|ref|ZP_04923543.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262394952|ref|YP_003286806.1| outer membrane protein A [Vibrio sp. Ex25]
gi|151937341|gb|EDN56204.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262338546|gb|ACY52341.1| outer membrane protein A precursor [Vibrio sp. Ex25]
Length = 320
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I ++ L+ + L + LN+ P + + +TD+ G NL +S++RA
Sbjct: 205 TIGTGSFDLNSTTLKPESAAKLDNLVAFLNEHPQANVEVVGYTDTSGPAAYNLKVSEKRA 264
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + L+++G+ S+R I RG PI +NDT+ GRQ N+R+EI +
Sbjct: 265 ESVANALVEKGIDSSR-IQARGEGENNPIASNDTREGRQQNRRVEIVV 311
>gi|71734248|ref|YP_276006.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257487118|ref|ZP_05641159.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|289626062|ref|ZP_06459016.1| ompA family protein [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289646239|ref|ZP_06477582.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 2250]
gi|298488307|ref|ZP_07006339.1| Outer membrane lipoprotein omp16 precursor [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
gi|71554801|gb|AAZ34012.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|298157129|gb|EFH98217.1| Outer membrane lipoprotein omp16 precursor [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
gi|320323146|gb|EFW79235.1| ompA family protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320329582|gb|EFW85571.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330867556|gb|EGH02265.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330878322|gb|EGH12471.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330892526|gb|EGH25187.1| ompA family protein [Pseudomonas syringae pv. mori str. 301020]
gi|330985082|gb|EGH83185.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331009256|gb|EGH89312.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 260
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 74/180 (41%), Gaps = 13/180 (7%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYI 76
+ ++ ++ +S D+A+ + + + +
Sbjct: 82 TNQRVELAKQTIALRTSEAALQNASADRAKARLEARDAQIAALKNSLNAKQTERGTLVTF 141
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ L+ + +A L + P + ++ +TDS G+ N +S+ RA+
Sbjct: 142 GDVLFDYNKADLKPTAQGDIGKLAAFLQENPDRKVIVEGYTDSTGSASYNQSLSERRANS 201
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-------PRGNIK 189
++ L++ GV R ++ G+ +YP+ N + GR N+R+E+ I PR ++K
Sbjct: 202 VRMALVRMGVDPARVVT-MGYGKEYPVADNTSNSGRAMNRRVEVTISNDNQPVAPRSSMK 260
>gi|282600293|ref|ZP_05973733.2| membrane protein OmpA-family [Providencia rustigianii DSM 4541]
gi|282565742|gb|EFB71277.1| membrane protein OmpA-family [Providencia rustigianii DSM 4541]
Length = 586
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 54/109 (49%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L+ +L + +I + +TDS G + N +S +RA+ ++
Sbjct: 454 SLFDVGQYTLKTDATKVLVDALLNIKAKSGWLIVVSGYTDSTGNPELNQKLSLKRAESVR 513
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++IQ S +V+G+ P+ +N+T GR N+R+EI++ P+
Sbjct: 514 DWMIQTSDISPTCFAVQGYGQNNPVASNETSEGRAQNRRVEIRLIPQAE 562
>gi|162450713|ref|YP_001613080.1| ompA family outer membrane protein [Sorangium cellulosum 'So ce
56']
gi|161161295|emb|CAN92600.1| omp A family outer membrane protein [Sorangium cellulosum 'So ce
56']
Length = 578
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 10/177 (5%)
Query: 18 CGLASREKKK-VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV-------SRIG 69
C +K + D + DK E + + G
Sbjct: 398 CPDDPEDKDGIDDRDGCPEEDADQDGIPDAEDKCPKEPGQVVVEDPEKNGCPFYIRRITG 457
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA-IQSHTDSIGTLKNNLL 128
+ + + P+L + +L P + I+ HTD+ GT+ N
Sbjct: 458 SAEIEIMKQVEFEFDSSRILPQSYPILDEVVRLLKANPEIKLLSIEGHTDNQGTIDYNDR 517
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ RA + + + ++ G+ + P+ +NDT GRQ N+R+E I +
Sbjct: 518 LAHNRAIAV-RVYLINKGVQSERLTSIGYGSRRPLLSNDTPEGRQRNRRVEFHIKSQ 573
>gi|326334952|ref|ZP_08201152.1| outer membrane protein OprF [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325692757|gb|EGD34696.1| outer membrane protein OprF [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 376
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
++ R+ I Y + + + ++ + +L IA I+ + I+
Sbjct: 240 ETPEEREARTIRVTKEINLYAKTILFDLDKAIVKTQAEFILDNIAKIMQENEDFNFVIEG 299
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD+ GT ++NL +SQERAD I + + + + +G+ P+++NDT+ GR+ N
Sbjct: 300 HTDNTGTPEHNLQLSQERADAI-RAYLVNKGINKKRLEAKGYGLSRPLESNDTERGREIN 358
Query: 176 QRIEIQIFP-RGNIKK 190
+R+EI + P +++K
Sbjct: 359 RRVEINVIPDEQHVEK 374
>gi|124022953|ref|YP_001017260.1| hypothetical protein P9303_12471 [Prochlorococcus marinus str. MIT
9303]
gi|123963239|gb|ABM77995.1| Hypothetical protein P9303_12471 [Prochlorococcus marinus str. MIT
9303]
Length = 252
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
LD + + + D I + +++ + + L+ + L+ +A +
Sbjct: 105 QGLDYSMKDLTYSINDLNITTKQENEVLIELAADVLFDFDKANLKPSAVASLETVAKRIR 164
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ + ++ HTDS G+ + N +S++RA ++ + + G SN +GF P+
Sbjct: 165 ETSQGDVRVEGHTDSKGSNEYNQTLSEKRAISVRDWFVSDGGLSNVQFVTKGFGELKPVV 224
Query: 165 TNDTKV------GRQNNQRIEIQI 182
+N T+ GRQ N+R+EI I
Sbjct: 225 SNTTEKGGDNPIGRQRNRRVEIII 248
>gi|15642211|ref|NP_231844.1| outer membrane protein OmpA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121586239|ref|ZP_01676029.1| outer membrane protein OmpA [Vibrio cholerae 2740-80]
gi|121726579|ref|ZP_01679828.1| outer membrane protein OmpA [Vibrio cholerae V52]
gi|147673624|ref|YP_001217730.1| outer membrane protein OmpA [Vibrio cholerae O395]
gi|153817076|ref|ZP_01969743.1| outer membrane protein OmpA [Vibrio cholerae NCTC 8457]
gi|153820798|ref|ZP_01973465.1| outer membrane protein OmpA [Vibrio cholerae B33]
gi|153825329|ref|ZP_01977996.1| outer membrane protein OmpA [Vibrio cholerae MZO-2]
gi|153829325|ref|ZP_01981992.1| outer membrane protein OmpA [Vibrio cholerae 623-39]
gi|227082337|ref|YP_002810888.1| outer membrane protein OmpA [Vibrio cholerae M66-2]
gi|229507710|ref|ZP_04397215.1| outer membrane protein A precursor [Vibrio cholerae BX 330286]
gi|229512095|ref|ZP_04401574.1| outer membrane protein A precursor [Vibrio cholerae B33]
gi|229519230|ref|ZP_04408673.1| outer membrane protein A precursor [Vibrio cholerae RC9]
gi|229607214|ref|YP_002877862.1| outer membrane protein A precursor [Vibrio cholerae MJ-1236]
gi|254225790|ref|ZP_04919395.1| outer membrane protein OmpA [Vibrio cholerae V51]
gi|254849343|ref|ZP_05238693.1| outer membrane protein OmpA [Vibrio cholerae MO10]
gi|255747088|ref|ZP_05421033.1| outer membrane protein A precursor [Vibrio cholera CIRS 101]
gi|262161368|ref|ZP_06030478.1| outer membrane protein A precursor [Vibrio cholerae INDRE 91/1]
gi|262167761|ref|ZP_06035463.1| outer membrane protein A precursor [Vibrio cholerae RC27]
gi|298500409|ref|ZP_07010214.1| outer membrane protein OmpA [Vibrio cholerae MAK 757]
gi|2641145|gb|AAB86826.1| putative outer membrane porin [Vibrio cholerae O395]
gi|9656770|gb|AAF95357.1| outer membrane protein OmpA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121549505|gb|EAX59531.1| outer membrane protein OmpA [Vibrio cholerae 2740-80]
gi|121631032|gb|EAX63411.1| outer membrane protein OmpA [Vibrio cholerae V52]
gi|125621696|gb|EAZ50025.1| outer membrane protein OmpA [Vibrio cholerae V51]
gi|126512344|gb|EAZ74938.1| outer membrane protein OmpA [Vibrio cholerae NCTC 8457]
gi|126521590|gb|EAZ78813.1| outer membrane protein OmpA [Vibrio cholerae B33]
gi|146315507|gb|ABQ20046.1| outer membrane protein OmpA [Vibrio cholerae O395]
gi|148875166|gb|EDL73301.1| outer membrane protein OmpA [Vibrio cholerae 623-39]
gi|149741013|gb|EDM55082.1| outer membrane protein OmpA [Vibrio cholerae MZO-2]
gi|227010225|gb|ACP06437.1| outer membrane protein OmpA [Vibrio cholerae M66-2]
gi|227014109|gb|ACP10319.1| outer membrane protein OmpA [Vibrio cholerae O395]
gi|229343919|gb|EEO08894.1| outer membrane protein A precursor [Vibrio cholerae RC9]
gi|229352060|gb|EEO17001.1| outer membrane protein A precursor [Vibrio cholerae B33]
gi|229355215|gb|EEO20136.1| outer membrane protein A precursor [Vibrio cholerae BX 330286]
gi|229369869|gb|ACQ60292.1| outer membrane protein A precursor [Vibrio cholerae MJ-1236]
gi|254845048|gb|EET23462.1| outer membrane protein OmpA [Vibrio cholerae MO10]
gi|255735490|gb|EET90890.1| outer membrane protein A precursor [Vibrio cholera CIRS 101]
gi|262023826|gb|EEY42525.1| outer membrane protein A precursor [Vibrio cholerae RC27]
gi|262028679|gb|EEY47333.1| outer membrane protein A precursor [Vibrio cholerae INDRE 91/1]
gi|297541102|gb|EFH77156.1| outer membrane protein OmpA [Vibrio cholerae MAK 757]
Length = 321
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ + + + V+ ++ + L+ + L I
Sbjct: 171 GSEEPAPVVEQRPAEPAPVAAPVEKVAVTKTFTFQHLDSSTFATASAELKPATVQKLDKI 230
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
LN++P + + HTDS G+ N +S+ RA + L +G+ ++R IS +G
Sbjct: 231 VGYLNQYPQAKVEVVGHTDSTGSEAYNQKLSERRAQAVAKALEAQGIDASR-ISAKGLGE 289
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
PI +N T GR+ N+R+E+ I
Sbjct: 290 SSPIASNATAEGREKNRRVELVI 312
>gi|254490152|ref|ZP_05103343.1| peptidoglycan-associated lipoprotein, putative [Methylophaga
thiooxidans DMS010]
gi|224464638|gb|EEF80896.1| peptidoglycan-associated lipoprotein, putative [Methylophaga
thiooxydans DMS010]
Length = 188
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 5/188 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE--DEFQMQL 58
M+K L + M ++ C + + + + + + G D + E ++ +
Sbjct: 3 MLK-LFAVLLPMLWLAACSSSPEKGMEGDVAVEDLSAETAGVRGQGADGEDMGAETKVVV 61
Query: 59 QDTGIVVSRIGDMIT-CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + + + D + V + + LQ A L K P+ + ++ HT
Sbjct: 62 GEDQYMGNELNDPSSPLSNRVVYFEYDSATVRVEDQETLQAHAAYLAKKPNLTLRLEGHT 121
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G + NL + + RA I ++ +S V F + P + ++ N+R
Sbjct: 122 DERGAREYNLALGERRALSI-RQILMLQGASINQFQVTSFGEERPAEEGSSEYAWSQNRR 180
Query: 178 IEIQIFPR 185
+E+ R
Sbjct: 181 VELVYIGR 188
>gi|169632713|ref|YP_001706449.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii SDF]
gi|169151505|emb|CAP00268.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii]
Length = 191
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 10/184 (5%)
Query: 1 MIKEL----GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M+K + + ++GC +K + T + + L +
Sbjct: 4 MMKSIKHLAFPLLSAALVMTGCAS-----RKPATTATTGTTNPSTVNTTGLSEDAALNAQ 58
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L + + L + LQ A L ++ +A+ H
Sbjct: 59 NLAGASSKGVTEANKAALAKRIVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGH 118
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD GT + N+ + + RA +++YLI + + + + + P++ + + N+
Sbjct: 119 TDERGTREYNMALGERRAKAVQNYLIT-SGVNPQQLEAVSYGKEAPVNPGHDESAWKENR 177
Query: 177 RIEI 180
R+EI
Sbjct: 178 RVEI 181
>gi|149277137|ref|ZP_01883279.1| outer membrane protein, OmpA family [Pedobacter sp. BAL39]
gi|149232014|gb|EDM37391.1| outer membrane protein, OmpA family [Pedobacter sp. BAL39]
Length = 280
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 44 GSSLDKAEDEFQMQLQD---TGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLI 99
+ ++ +++ Q L +G+ V + + + F S +++K L +
Sbjct: 120 DEATNQLKEKLQQALLGFTKSGLTVEIKNGKVYVSMTDKLLFPSGSIVIDEKGKQALTQL 179
Query: 100 ATILNKFPSTVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
AT+L + P IA++ HTDS G +K+N +S R+ + YL + + ++
Sbjct: 180 ATVLKQQPEINIAVEGHTDSQKITNLGQIKDNWDLSVLRSTSVVRYLTEVNKVESVRMTA 239
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+ +N GR N+RIEI + P+
Sbjct: 240 TGKGEFQPLVSNANAEGRSKNRRIEIVLSPK 270
>gi|120600520|ref|YP_965094.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|146294678|ref|YP_001185102.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|120560613|gb|ABM26540.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
gi|145566368|gb|ABP77303.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
Length = 202
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 67/183 (36%), Gaps = 5/183 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + ++GC + + R G + +A + +
Sbjct: 2 KTVILFLSIILLAGCSMRDTVNIEEMTTTQAYDLSDKDRDG--VVEARERCNDTMLGAST 59
Query: 64 VVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G + + F+ ++ ++ IA L ++P+T + I+ HT
Sbjct: 60 DNYGCGRIKAINERKEINILFPNDSAFIAPEYYSQIEDIAAFLRQYPTTKVTIEGHTSRT 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N ++SQERAD + + L R ++ G+ PI T N+R+
Sbjct: 120 GTDERNAVLSQERADAVTAALADRFNIDRSRLTAIGYGSSRPIVLEQTPEAEMRNRRVVA 179
Query: 181 QIF 183
++
Sbjct: 180 EVT 182
>gi|328947766|ref|YP_004365103.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
gi|328448090|gb|AEB13806.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
Length = 490
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 4/128 (3%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK---FPSTVIAIQSHTDS 119
+ ++ + I + L + P + IA L K I I+ HT
Sbjct: 359 VDLNEVLTGIQITMQNLRFIADSYELLPQEKPRIAQIAESLKKATSSGEYTILIEGHTAD 418
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ + +S +RA I L+ + RGF P+ N T GR N+R+E
Sbjct: 419 VNKPNGQMTLSIQRAQEIIKELVSN-GIDKNLFTYRGFGGTKPVADNSTPQGRALNRRVE 477
Query: 180 IQIFPRGN 187
I I P+G+
Sbjct: 478 IIIMPKGS 485
>gi|238799328|ref|ZP_04642769.1| hypothetical protein ymoll0001_24410 [Yersinia mollaretii ATCC
43969]
gi|238716817|gb|EEQ08692.1| hypothetical protein ymoll0001_24410 [Yersinia mollaretii ATCC
43969]
Length = 574
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 56/109 (51%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L+ +L + P +I + HTD G ++N ++S +RA+ ++
Sbjct: 442 SLFDVGKSELKSGSTKVLINALVGIKAKPGWLIVVAGHTDITGDSQSNQILSLKRAESVR 501
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ G +V+G+ P+ +NDT+ GR N+R+EI + P+ +
Sbjct: 502 NWMRDTGDIPESCFAVQGYGQSRPLKSNDTEAGRALNRRVEISLVPQAD 550
>gi|37521397|ref|NP_924774.1| outer membrane protein [Gloeobacter violaceus PCC 7421]
gi|35212394|dbj|BAC89769.1| glr1828 [Gloeobacter violaceus PCC 7421]
Length = 227
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 12/176 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMIT 73
L + + +V L ++ G S ++ + Q + R I
Sbjct: 46 SLVALDPSEVALMSPTGSETAADSAGGSATRSTQIAASETQVVNQILSDFNAQRTASGIV 105
Query: 74 CYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+P + F + L LQ +A ++N + + I I HTDS G N +S+
Sbjct: 106 VTLPEDILFDFDKADLRPSAQVALQKMAQVINFYKNAPIEISGHTDSKGADGYNRSLSER 165
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQI 182
RA+ ++SYL + ++ RG P+ N D GRQ N+R+EI I
Sbjct: 166 RAEAVRSYLANNFSVTTGRLTARGLGEGKPVAPNTKPDGSDDPAGRQKNRRVEILI 221
>gi|260891212|ref|ZP_05902475.1| OmpA family protein [Leptotrichia hofstadii F0254]
gi|260859239|gb|EEX73739.1| OmpA family protein [Leptotrichia hofstadii F0254]
Length = 172
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 11/183 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K+ ++ + + +++ L + + GS L + E
Sbjct: 1 MEKKSKITAMLSVLLVSAPTTAKKITTSNLRDNAMRSTAIEVEGSELGELEA-------- 52
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ S D++ + +++++ P L+ + + + + I+I +TDS
Sbjct: 53 --VKESADSDVVVLDANQLKFDFNSATIKEEYTPALKKLKDYI-EAKNQKISIIGYTDSK 109
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N +S RA+ ++ LI G+S R I +G P+ TNDT+ GR N+RIEI
Sbjct: 110 GTREYNRELSLRRAESLEEKLIDLGLSPERIIETKGNGDANPVATNDTEEGRAANRRIEI 169
Query: 181 QIF 183
Q
Sbjct: 170 QFM 172
>gi|190575561|ref|YP_001973406.1| putative peptidoglycan-associated lipoprotein [Stenotrophomonas
maltophilia K279a]
gi|254523725|ref|ZP_05135780.1| PAL family outer membrane lipoprotein [Stenotrophomonas sp. SKA14]
gi|190013483|emb|CAQ47118.1| putative peptidoglycan-associated lipoprotein [Stenotrophomonas
maltophilia K279a]
gi|219721316|gb|EED39841.1| PAL family outer membrane lipoprotein [Stenotrophomonas sp. SKA14]
Length = 172
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 71/188 (37%), Gaps = 19/188 (10%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L +S+ + ++GC +E+ G+S
Sbjct: 1 MNKSTRVLLVSLLSVAVLAGCSKKVKEE-----------PAAPVDTGTSTTTPTGPSTSG 49
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L G + V + + ++ +F ++ A L PS+ I +Q HT
Sbjct: 50 LYGPG----DLDTDACLRQRVVYFDLDKEDVKPEFQAIMACHAKYLRDRPSSRITLQGHT 105
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ N + + R + + S L G S+++ ++V + + P+ T + N+R
Sbjct: 106 DERGSRAYNQALGERRGNGVNSALQANGGSASQ-LTVVSYGEERPVCTESNESCWSQNRR 164
Query: 178 IEIQIFPR 185
+EI +
Sbjct: 165 VEIVYTAQ 172
>gi|4530367|gb|AAD22006.1| major outer membrane protein [Pseudomonas fluorescens]
Length = 344
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 55/131 (41%), Gaps = 4/131 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + +++ ++ +A + ++PST ++ H
Sbjct: 214 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKENSYGDIKNLADFMKQYPSTSTTVEGH 273
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS+G N +S+ RA+ +K L + + + G+ P+ N T GR N+
Sbjct: 274 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVADNATDAGRAVNR 333
Query: 177 RIEIQIFPRGN 187
R+E Q+ +
Sbjct: 334 RVEAQVEAQAK 344
>gi|238783359|ref|ZP_04627383.1| hypothetical protein yberc0001_33370 [Yersinia bercovieri ATCC
43970]
gi|238715782|gb|EEQ07770.1| hypothetical protein yberc0001_33370 [Yersinia bercovieri ATCC
43970]
Length = 574
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 55/109 (50%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L+ +L + P +I + HTD G K+N +S +RA+ ++
Sbjct: 442 SLFDVGKSELKSGSTKVLINALVGIKAKPGWLIVVAGHTDITGDDKSNQTLSLKRAESVR 501
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ G +V+G+ P+ +NDT+ GR N+R+EI + P+ +
Sbjct: 502 NWMRDTGDIPESCFAVQGYGQSRPLQSNDTEAGRAANRRVEISLVPQAD 550
>gi|297529303|ref|YP_003670578.1| OmpA/MotB domain protein [Geobacillus sp. C56-T3]
gi|297252555|gb|ADI26001.1| OmpA/MotB domain protein [Geobacillus sp. C56-T3]
Length = 268
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 9/164 (5%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQD----TGIVVSRIGDMITCYIPVHVSFV-SEVFL 88
N +N+ L + + + + + S + + I + F +
Sbjct: 97 NPPSSINEGEKEELKQIQAKIDSYIHQKHLTGKLQTSLTDEGLAITILDDILFDSGSAEV 156
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQR 144
K + I+ +L P I I HTD++ +N +S RA L++
Sbjct: 157 RMKDRRLAAEISALLVMNPPRNIMISGHTDNVPIHNEKFASNWELSVMRAVNFMKVLLEN 216
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
R+ S +G+ PI +N T GR N+R+EI I PR ++
Sbjct: 217 KQLDPRYFSAKGYGEYKPIASNATAAGRMKNRRVEILILPRTDV 260
>gi|124007996|ref|ZP_01692696.1| outer membrane protein [Microscilla marina ATCC 23134]
gi|123986580|gb|EAY26379.1| outer membrane protein [Microscilla marina ATCC 23134]
Length = 336
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V+ I + + VS +E L + LN++P V+ + HTD+ G
Sbjct: 217 VTPIEKGVKILLNNLFFGVSSSKIESTSFDELDRLVRTLNEYPKMVVQLNGHTDNQGGAT 276
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N L+SQ RA +++YL + + + V+GF PI N+T GR N+R+E ++
Sbjct: 277 RNQLLSQHRARSVRNYLANK-GIARHRVKVKGFGASQPIADNNTLKGRIRNRRVEFEVL 334
>gi|74316145|ref|YP_313885.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
gi|74055640|gb|AAZ96080.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
Length = 415
Score = 98.2 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + R +P V+F L + +L T+LN+ + + HT
Sbjct: 292 EQAAQLERSQAGDVVVLPEGVNFAFDSAELRPDAVTVLDEAVTVLNRRTDIKVDVVGHTC 351
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+IG N +S+ RA + Y I GV+++R ++ +G+ P +NDT+ GR+ N+R+
Sbjct: 352 NIGPEAYNQGLSERRAKSVYDYFIDNGVAADR-LTTQGYGETRPAYSNDTREGREKNRRV 410
Query: 179 EIQI 182
E+ +
Sbjct: 411 ELHV 414
>gi|327398898|ref|YP_004339767.1| OmpA/MotB domain-containing protein [Hippea maritima DSM 10411]
gi|327181527|gb|AEA33708.1| OmpA/MotB domain protein [Hippea maritima DSM 10411]
Length = 310
Score = 98.2 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
L + E + + I ++ ++ P ++ IA +L +
Sbjct: 175 LKQIETGLVKIINAKTMKKEIETKG-HVPIYGIYFDFNKATIKPSSEPTIKEIARLLKEN 233
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
PS + + HTDSIG L N+ +S++RA + L+++ + + G P+ +N
Sbjct: 234 PSLKLYVVGHTDSIGDLNYNMKLSKKRAKAVVDELVKKYNINPNRLKAFGVGPLAPVASN 293
Query: 167 DTKVGRQNNQRIEIQ 181
T+ GR N+R+E+
Sbjct: 294 KTEEGRSKNRRVELI 308
>gi|310818239|ref|YP_003950597.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309391311|gb|ADO68770.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 565
Score = 98.2 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 5/169 (2%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
C E D + D+ D G ++RI +
Sbjct: 365 ACPS---EVGTAARSGCPIRDNDQDGVANEDDRCPDVPAGPSGKNGCPLARIQGNKILIL 421
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERAD 135
+ L + P+L+ ++ +L P + ++ HTDS + + NL +S+ RA
Sbjct: 422 EPINFATDQDILLSESWPILEEVSQMLKTHPEIKRLLVEGHTDSRSSDEYNLELSRRRAA 481
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I ++ + + +GF P+ N + G N+R+E + P
Sbjct: 482 SI-RVYLEESGVESERLCSQGFGRSRPVADNKNEEGMALNRRVEFTVLP 529
>gi|319427914|gb|ADV55988.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 202
Score = 98.2 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 67/183 (36%), Gaps = 5/183 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + ++GC + + R G + +A + +
Sbjct: 2 KTVILFLSIILLAGCSMRDTVNIEEMTTTQAYDLSDKDRDG--VVEARERCNDTMLGAST 59
Query: 64 VVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G + + F+ ++ ++ IA L ++P+T + I+ HT
Sbjct: 60 DNYGCGRIKAINERKEINILFPNDSAFIAPEYYSQIEDIAAFLRQYPTTKVTIEGHTSRT 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N ++SQERAD + + L R ++ G+ PI T N+R+
Sbjct: 120 GTDERNAVLSQERADAVTAALADRFNIERSRLTAIGYGSSRPIVLEQTPEAEMRNRRVVA 179
Query: 181 QIF 183
++
Sbjct: 180 EVT 182
>gi|224826141|ref|ZP_03699244.1| peptidoglycan-associated lipoprotein [Lutiella nitroferrum 2002]
gi|224601778|gb|EEG07958.1| peptidoglycan-associated lipoprotein [Lutiella nitroferrum 2002]
Length = 178
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 59/180 (32%), Gaps = 10/180 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L + + ++ C + N + + D
Sbjct: 3 LKHLLIGTATVALLAACSSTK--PLETAAPTVNGSAGAGQSATLPADT------GAAGQG 54
Query: 62 GIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V + D +++ + A L P+ + IQ +TD+
Sbjct: 55 SVAVDPLKDPNSPLSKRSVYFDFDSSAVKQSEQQTVANHAEYLKSHPTRKVVIQGNTDAR 114
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ + NL + Q RA+ +K+ + + F + P T +T+ N+R +I
Sbjct: 115 GSREYNLGLGQRRAESVKNAMQV-IGVKENQLEAVSFGKEKPKATGNTEADYAQNRRADI 173
>gi|187932715|ref|YP_001887659.1| chemotaxis protein MotB [Clostridium botulinum B str. Eklund 17B]
gi|187720868|gb|ACD22089.1| putative chemotaxis MotB protein [Clostridium botulinum B str.
Eklund 17B]
Length = 244
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 77/214 (35%), Gaps = 33/214 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ L M + + ++K + + G+ + E+ + + + ++
Sbjct: 22 ITLLMVLFVVLYASSNVDKQKYRQISDSFKQAFSIGDAPGAIKEVGEETNENSIVNDAVM 81
Query: 65 VSRI---------------------------GDMITCYIPVHVSFV-SEVFLEKKFLPML 96
V + +V F + ++ ++ L
Sbjct: 82 VESEKLDTAKSKVDELIKEYNLEGRVSTQIQERGLIISFNDNVFFNSGDATIKSEYKQKL 141
Query: 97 QLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
I+ ILN + I ++ +TD+ +N +S RA + L++ G ++ +
Sbjct: 142 ISISKILNDIDNY-IRVEGNTDNVAINTENFHSNWQLSAIRAANVVELLVKEGNINSDKL 200
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S G+ P+ +NDT+ GR N+R++I I
Sbjct: 201 SAIGYGEYRPVKSNDTEEGRAANRRVDIVILNNE 234
>gi|163749515|ref|ZP_02156763.1| flagellar motor protein [Shewanella benthica KT99]
gi|161330924|gb|EDQ01851.1| flagellar motor protein [Shewanella benthica KT99]
Length = 304
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 6/169 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
A + +S + + K E ++ D I + +G I I
Sbjct: 122 AKAESVSQARAEEESKAQAAAQENINDQVKKMAQELNKEIVDGAIEIESLGQQIIIRIRE 181
Query: 79 HVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQER 133
+F S FL+ +F P+++ + +L P + + TD + +N +S +R
Sbjct: 182 KGAFSSGSGFLQPRFKPVIRRVGELLRDIPGI-VTVSGFTDDMNISNELYSSNWDLSSKR 240
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A + LI+ + V G A P+ ND+ R N+R+EI I
Sbjct: 241 AVAVAHELIKVRGFDQNRMKVVGMANTNPLVDNDSASNRARNRRVEIAI 289
>gi|239996641|ref|ZP_04717165.1| flagellar motor protein MotB [Alteromonas macleodii ATCC 27126]
Length = 309
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 7/167 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ S + + + K + + Q+ D + + +G +T I + S
Sbjct: 128 QSQQTATESSSSAEQSTDQSQMAELMKKVAQQLEKQILDGSVEMESLGQQLTIRIRENGS 187
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADV 136
F FL+ +F P+L+ I T+L P I I H+D ++N +S +RA
Sbjct: 188 FSAGSAFLQPQFQPVLRKIGTLLADVPG-EIEISGHSDGQHIANELYRSNWDLSAQRAVA 246
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-KVGRQNNQRIEIQI 182
+ + +SV G A PI N T R N+R+EI I
Sbjct: 247 VAEAMRTAPGFDESRMSVVGKADTDPIVENATSPSDRAQNRRVEINI 293
>gi|254786261|ref|YP_003073690.1| hypothetical protein TERTU_2240 [Teredinibacter turnerae T7901]
gi|237686902|gb|ACR14166.1| conserved repeat domain protein [Teredinibacter turnerae T7901]
Length = 3228
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPML 96
+ + + +A+ + +V+S+ + V+F + L + L
Sbjct: 3075 TAPLKVVAEIPEAKPAIPAEPAKEYVVISKDDCALFSGTLEGVTFATASAQLTEAAQHTL 3134
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
Q L ++P I+I++HTD++G ++NL +S+ RA ++ + + GV + R +S RG
Sbjct: 3135 QNAVDALQRYPRLAISIRAHTDAVGKAEDNLALSEARALAVQQFFVAAGVDNER-LSARG 3193
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ P+ N T GR N+R+E+++
Sbjct: 3194 YGEAEPVADNSTAAGRAQNRRVELKL 3219
>gi|298505133|gb|ADI83856.1| OmpA family outer membrane lipoprotein [Geobacter sulfurreducens
KN400]
Length = 289
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 10/176 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+R K + + + V + + D D+ + ++ + +S + +T +
Sbjct: 114 AENARLKADIASTQKAKEEKVREVSKTYEDLL-DKMKGEIAQGQVTISELKGKLTVNMVD 172
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG-------TLKNNLLIS 130
+ F + ++ + +LQ + IL I I+ HTD++ +N +S
Sbjct: 173 AILFDSGKAEVKPAGMDILQKVVEILKDVTDKAIRIEGHTDNVQIVGNLAKRFPSNWELS 232
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
RA + +L R +S + +P+ NDT G+ N+RIEI + P+
Sbjct: 233 SARAINVTRFLQSR-GIDPAVLSAVAYGEYHPVAPNDTDEGKAKNRRIEIILVPKD 287
>gi|91229460|ref|ZP_01262927.1| flagellar motor protein [Vibrio alginolyticus 12G01]
gi|91187396|gb|EAS73750.1| flagellar motor protein [Vibrio alginolyticus 12G01]
Length = 186
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFP 107
K ++ + +++ I V +G I + +F FL+ KF P+++ IA ++ P
Sbjct: 34 KHQESLEREIEQGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVP 93
Query: 108 STVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + HTD+ ++N +S +RA + + + S++ + VRG A P+
Sbjct: 94 GI-VRVSGHTDNRPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPL 152
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
ND+ R N+R+EI I
Sbjct: 153 LPNDSDDNRALNRRVEISIM 172
>gi|253575920|ref|ZP_04853254.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon
786 str. D14]
gi|251844714|gb|EES72728.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon
786 str. D14]
Length = 293
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 70/184 (38%), Gaps = 18/184 (9%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-----------DTGIVVSR 67
G E + + + K E+E ++ + I V+
Sbjct: 108 GSKQGEGQGTTGQADSSGQAPLTERELAFRKQEEELANLMKLIESYIKDNSLEDQIHVAD 167
Query: 68 IGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT---- 122
+ I+ + F + L+ L +A++ + TVI+I+ HTD++
Sbjct: 168 LPQGISITLSDRFLFDTGKADLKSGSAKTLAKLASLFRQL-DTVISIEGHTDNLPIVYAS 226
Query: 123 -LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
K+N +S RA + + + + + G+A P NDT GRQ N+R+EI
Sbjct: 227 EFKDNWELSGARALSVLRFFVDKEKLDPQQFQYAGYADTRPAADNDTPEGRQKNRRVEIT 286
Query: 182 IFPR 185
+ +
Sbjct: 287 VLRQ 290
>gi|308049997|ref|YP_003913563.1| peptidoglycan-associated lipoprotein [Ferrimonas balearica DSM
9799]
gi|307632187|gb|ADN76489.1| peptidoglycan-associated lipoprotein [Ferrimonas balearica DSM
9799]
Length = 175
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 66/181 (36%), Gaps = 12/181 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ ++ C S + + + G+ E
Sbjct: 6 VLKGLLIAVP-ALALTACSSTSDTDAQSSSSSNQQQVESGVQTGAIEQVQTPE------- 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ R + + ++ +L+ A L + PST + I+ H D
Sbjct: 58 ---EIQRQKYEQLRQEHIIYFDFDRSDVSGQYAELLEAHAAFLVENPSTKVLIEGHADER 114
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA ++ YL + I++ + + P+D++ T N+R +
Sbjct: 115 GTPEYNIALGERRAKAVERYLQGL-GVLSSQITIVSYGEEKPLDSSATDAAHAKNRRAVL 173
Query: 181 Q 181
Sbjct: 174 V 174
>gi|71064914|ref|YP_263641.1| outer membrane protein [Psychrobacter arcticus 273-4]
gi|71037899|gb|AAZ18207.1| probable outer membrane protein [Psychrobacter arcticus 273-4]
Length = 394
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 61/164 (37%), Gaps = 2/164 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ + +D D S+D + + G V
Sbjct: 215 PDVQTPPIVIVESDLDSDGDGVLDSIDACPGTPMNVVVDARGCPVPVDITDELKMELRVF 274
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-LKNNLLISQERADVIKS 139
+ ++ ++ P + +A + ++P++ ++ H G + N +S+ RA +KS
Sbjct: 275 FDNDKSAIKTQYKPEIAKVAEKMREYPNSTARVEGHASKTGPSARYNQRLSEARAVAVKS 334
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L + +S G+ Y PI N+T+ GR N+R+ I
Sbjct: 335 MLTNEFGIAPNRLSTVGYGYDQPIADNNTEEGRAMNRRVYAIIT 378
>gi|332668433|ref|YP_004451221.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332337247|gb|AEE54348.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 501
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 61/162 (37%), Gaps = 2/162 (1%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV-SRIGDMITCYIPVHVSFV 83
K L D S DK ++ + + + + +T
Sbjct: 341 DVKGSLANRGCPDTDGDGIIDSADKCPNQPGPASNNGCPEIAQKDRETLTFAARNVQFET 400
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L+ +L + IL ++ + + HTD++G+ + NL +S+ RA YL+
Sbjct: 401 GSAVLKNTSNTILDQVVDILKRYSDYNVRVSGHTDNVGSDELNLKLSKARAKACTDYLVS 460
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ I GF P+ N T GR N+R E +++ +
Sbjct: 461 K-GIPANRIVFDGFGESRPVANNATPQGRTQNRRTEFELYQK 501
>gi|282881335|ref|ZP_06290015.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
gi|281304811|gb|EFA96891.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
Length = 225
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 80/207 (38%), Gaps = 27/207 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV---------------------- 39
+K + L+M +MT S C +
Sbjct: 4 MKAMTLAMCLMTVFS-CSTKQGTGALAGAGGGAVLGAIIGKIAGNAGVGAAIGGAVGAGT 62
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSFVSE-VFLEKKFLPM 95
G +DK E Q+++ + + + + F S L +
Sbjct: 63 GAIIGRHMDKVAAETAAQVENAKVEEVTDKNGLKAVKVTFDSGILFASSKAILNQASKNE 122
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +T+L K + I HTDS G N+ +S +RA + +YL GVSS++F +V
Sbjct: 123 LAKFSTVLKKNRDCHVDILGHTDSTGNDGINIPLSNDRAQSVVNYLKSCGVSSSQFQNVS 182
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ TN+TK GRQ N+R+E+ +
Sbjct: 183 GMGSSQPVATNETKAGRQQNRRVEVYL 209
>gi|254225118|ref|ZP_04918732.1| chemotaxis protein PomB [Vibrio cholerae V51]
gi|125622505|gb|EAZ50825.1| chemotaxis protein PomB [Vibrio cholerae V51]
Length = 318
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 6/173 (3%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
S + + ++++ + + + +++ I V +G I
Sbjct: 129 SAETSVQDSQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIR 188
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLIS 130
I +F FL+ KF P+++ IA ++ P + + HTD+ ++N +S
Sbjct: 189 IREKGAFPEGSAFLQPKFRPLVRQIAELVKDIPG-KVRVTGHTDNQKLDSELYRSNWDLS 247
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA + + + + + VRG A P+ NDT+ R N+R+EI I
Sbjct: 248 AQRAVSVAQEMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATNRRVEISIL 300
>gi|299134013|ref|ZP_07027206.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
gi|298590760|gb|EFI50962.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
Length = 464
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 71/191 (37%), Gaps = 15/191 (7%)
Query: 6 GLSMFIMTTISGCG--LASR---EKKKVFLHKSNDTDIVNKRFGSSLD-------KAEDE 53
G MT +S + + V L N R L K + E
Sbjct: 274 GFLAATMTALSALSRLSTGTLTIQDRNVTLSGDALYPGANARISEELAAKLPQGWKQKAE 333
Query: 54 FQMQLQDTGIVVSRIGDMI--TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
++ + + ++ + ++ +L + + + P++ I
Sbjct: 334 LTVKPVAAPVNATICQQLLTGLLAKGTIQFETGKAVIDPDSAGLLDRLIEAVLRCPTSQI 393
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I+ HTDS G + NL +S RA + Y I + IS GF + P+ +NDT+ G
Sbjct: 394 EIEGHTDSNGEKEANLALSMRRAQAVADYFI-KAGVPKERISAVGFGSERPVASNDTEEG 452
Query: 172 RQNNQRIEIQI 182
+ N+RIE +
Sbjct: 453 KAQNRRIEFVV 463
>gi|90019934|ref|YP_525761.1| hypothetical protein Sde_0285 [Saccharophagus degradans 2-40]
gi|89949534|gb|ABD79549.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 364
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + L+ + L +ATILN+ P+ I I HTD++G K NL +S R
Sbjct: 192 IDLYGFHFDSGKSALKPESDSELAELATILNEHPALKIKIVGHTDNVGDSKANLKLSAAR 251
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
A + + L++ + +S G P+DTN T +GR N+R+EI
Sbjct: 252 AKSVLNALVKNFNVNAANLSAEGQGETQPVDTNSTDMGRAKNRRVEII 299
>gi|331002828|ref|ZP_08326342.1| hypothetical protein HMPREF0491_01204 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413317|gb|EGG92685.1| hypothetical protein HMPREF0491_01204 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 409
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 8/172 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ-----MQLQDTGIVVSRIGDM 71
G G + + V K + D L V + +
Sbjct: 237 GSGSYENSATGLIIENDGQGKAVIKIDDDEKEVKADPLDFTYKLPLLNSVPAVPAIEANS 296
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I + V F + L + L +A +L + + I HTDS N +S
Sbjct: 297 IMITMDAGVLFDVDKYDLRNESKETLNNLAKVLKEANISAFEIDGHTDSDADDAYNQTLS 356
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ RA+ +K YL+ GV++N I+ G+ P+ +NDT G+Q N+R+EI I
Sbjct: 357 ENRANSVKEYLVSVGVTAN--ITTNGYGESRPVASNDTPEGKQQNRRVEIII 406
>gi|312173865|emb|CBX82119.1| putative type VI secretion system-associated hypothetical protein
[Erwinia amylovora ATCC BAA-2158]
Length = 551
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 58/125 (46%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ I V + + + + L+ ML + P +I + HTD+
Sbjct: 412 SLIPVEKDTPQAVRLDALSLFDTGKYQLKPNSTKMLVKALMGIKAKPGWLIVVAGHTDNT 471
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G N ++S +RA+ ++ +++ S +V+G+ PI +NDT GR+ N+R+EI
Sbjct: 472 GEANANQVLSHKRAEALRHWMLSTSDVSPTCFAVQGYGATRPIASNDTVEGREANRRVEI 531
Query: 181 QIFPR 185
+ P+
Sbjct: 532 SLVPQ 536
>gi|292489687|ref|YP_003532577.1| putative type VI secretion system-associated protein [Erwinia
amylovora CFBP1430]
gi|292898097|ref|YP_003537466.1| outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291197945|emb|CBJ45046.1| putative outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291555124|emb|CBA23275.1| putative type VI secretion system-associated hypothetical protein
[Erwinia amylovora CFBP1430]
Length = 551
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 58/125 (46%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ I V + + + + L+ ML + P +I + HTD+
Sbjct: 412 SLIPVEKDTPQAVRLDALSLFDTGKYQLKPNSTKMLVKALMGIKAKPGWLIVVAGHTDNT 471
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G N ++S +RA+ ++ +++ S +V+G+ PI +NDT GR+ N+R+EI
Sbjct: 472 GEANANQVLSHKRAEALRHWMLSTSDVSPTCFAVQGYGATRPIASNDTVEGREANRRVEI 531
Query: 181 QIFPR 185
+ P+
Sbjct: 532 SLVPQ 536
>gi|167588145|ref|ZP_02380533.1| OmpA/MotB [Burkholderia ubonensis Bu]
Length = 592
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 49/111 (44%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L+ + ++ P I + HTD++G NL +S +RA ++
Sbjct: 474 SLFDSGKAALKPDSTRAMVGALELIKAHPGKRILVAGHTDAVGKPDRNLKLSVDRAAAVR 533
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+L+ + +++G+ P+ N T GR N+R+EI + P +
Sbjct: 534 DWLVDASGIAPTQFAIQGYGDTRPVADNATPEGRARNRRVEITLVPDAPAQ 584
>gi|86606634|ref|YP_475397.1| OmpA family protein [Synechococcus sp. JA-3-3Ab]
gi|86555176|gb|ABD00134.1| OmpA family protein [Synechococcus sp. JA-3-3Ab]
Length = 273
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 12/157 (7%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVS-----------RIGDMITCYIPVHVSFVSEVFL 88
+ + + E ++ G V ++G + + +
Sbjct: 117 SSPAAAPEPRRESATTAEIAPEGASVPAPTATPTPTSFQVGTRTISLPGDLLFDFDKAEI 176
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR-GVS 147
+ +L +A L + P + + HTD+IG+L NL +S RA+ +K YL
Sbjct: 177 RPEAASLLAEVAKSLREMPGARVQVNGHTDNIGSLNYNLDLSLRRANAVKDYLANLLPED 236
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ GF P+ NDT+ GRQ N+R+++ I P
Sbjct: 237 HPISWTTSGFGPTLPVADNDTEEGRQRNRRVDLIIAP 273
>gi|315225274|ref|ZP_07867091.1| OmpA domain protein [Capnocytophaga ochracea F0287]
gi|314944957|gb|EFS96989.1| OmpA domain protein [Capnocytophaga ochracea F0287]
Length = 360
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
++ R+ I Y + + ++ + +L IA I+N+ P ++
Sbjct: 230 ETAEEREARTQRVVKQINLYAKTILFDTDKSVVKPQAEFILDNIAIIMNENPDFNFVVEG 289
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD+ GT ++NL +SQ+RAD IK + R S + + +G+ PI++N+T+ G++ N
Sbjct: 290 HTDNTGTPEHNLKLSQDRADAIKQ-YLSRHGVSKKRLDAKGYGQTRPIESNETERGKEIN 348
Query: 176 QRIEIQIF 183
+R+EI +
Sbjct: 349 RRVEINVV 356
>gi|238798865|ref|ZP_04642332.1| hypothetical protein ymoll0001_31770 [Yersinia mollaretii ATCC
43969]
gi|238717266|gb|EEQ09115.1| hypothetical protein ymoll0001_31770 [Yersinia mollaretii ATCC
43969]
Length = 575
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 55/109 (50%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L+ +L + P +I + HTD G K+N +S +RA+ ++
Sbjct: 443 SLFDVGQSMLKPGSTKVLINALVGIKAKPGWLIVVAGHTDITGDDKSNQTLSLKRAESVR 502
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ G +V+G+ P+ +NDT+ GR N+R+EI + P+ +
Sbjct: 503 NWMRDTGDIPESCFAVQGYGQSRPLKSNDTEAGRALNRRVEISLVPQAD 551
>gi|261342420|ref|ZP_05970278.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
gi|288315055|gb|EFC53993.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
Length = 606
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 55/155 (35%), Gaps = 5/155 (3%)
Query: 40 NKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
E + Q++ + + + V + L
Sbjct: 445 AGGIYYYARHNIGEIREQIRQFSPFPENLAADNDASLFSLADTVPLFANGSSTLMPDSEK 504
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L + + + P + I H+DS G+ NL +S ERA VIK +L+
Sbjct: 505 TLLAVVPAIRRSPEKMFLIVGHSDSTGSAATNLALSAERAQVIKEWLVAHTGLPAEQFIT 564
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
G P+ NDTK GR N+R+EI R IK
Sbjct: 565 EGAGDTRPVANNDTKDGRAQNRRVEIIPLSRQTIK 599
>gi|115378368|ref|ZP_01465532.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115364644|gb|EAU63715.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 494
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 5/169 (2%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
C E D + D+ D G ++RI +
Sbjct: 294 ACPS---EVGTAARSGCPIRDNDQDGVANEDDRCPDVPAGPSGKNGCPLARIQGNKILIL 350
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERAD 135
+ L + P+L+ ++ +L P + ++ HTDS + + NL +S+ RA
Sbjct: 351 EPINFATDQDILLSESWPILEEVSQMLKTHPEIKRLLVEGHTDSRSSDEYNLELSRRRAA 410
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I ++ + + +GF P+ N + G N+R+E + P
Sbjct: 411 SI-RVYLEESGVESERLCSQGFGRSRPVADNKNEEGMALNRRVEFTVLP 458
>gi|226946867|ref|YP_002801940.1| OmpA/MotB family protein [Azotobacter vinelandii DJ]
gi|226721794|gb|ACO80965.1| OmpA/MotB family protein [Azotobacter vinelandii DJ]
Length = 261
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 60/155 (38%), Gaps = 6/155 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ + + D + Q +LQ + + + L+
Sbjct: 103 QQTSSQRAEARLQARDAQIRQLQEELQASH-----TERGTLVTFGDVLFDYNRAELKPGG 157
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+ +Q +A L P + ++ +TDS G+ N +S+ RA + + + R I
Sbjct: 158 MHNVQKLADFLRANPQRQVIVEGYTDSTGSDAYNRDLSERRAGAV-RIALIKMGIDPRRI 216
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +G YP+ +N + GR N+R+E+ I +
Sbjct: 217 ATQGHGKNYPVTSNASPAGRAMNRRVEVTISDEDD 251
>gi|289769405|ref|ZP_06528783.1| secreted protein [Streptomyces lividans TK24]
gi|289699604|gb|EFD67033.1| secreted protein [Streptomyces lividans TK24]
Length = 210
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 71/194 (36%), Gaps = 17/194 (8%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL--------DKAEDEFQ 55
L ++ +M + CG + + D A
Sbjct: 10 RLLAAVTLMLATTVCGTTTAHADDDPNDPPGTEPSASAPVEVDPNDPDLKLPDGATLAQA 69
Query: 56 MQLQDTGIVVSRIGDM--------ITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
L +V + GD +T + V F L + ++ IA +
Sbjct: 70 KVLDIKSVVEEQSGDERREDTNTSVTLALQAEVLFGKDSSKLGAEAKSRIRGIADEIRAQ 129
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+T + + TD +G+ + ++S+ RA+ + L Q + VRG+ +YPI N
Sbjct: 130 NATRVRVFGFTDDLGSSAHGDVLSKRRANAVHDVLSQSLNDAGITYEVRGYGEQYPIADN 189
Query: 167 DTKVGRQNNQRIEI 180
T+ GR+ N+R+E+
Sbjct: 190 STEAGRKKNRRVEV 203
>gi|317049660|ref|YP_004117308.1| OmpA/MotB domain-containing protein [Pantoea sp. At-9b]
gi|316951277|gb|ADU70752.1| OmpA/MotB domain protein [Pantoea sp. At-9b]
Length = 528
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 54/108 (50%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L+ ML + P +I I HTD+ G N +S +RA+ +++
Sbjct: 398 LFDSGKAELKPGSTKMLIKALVGIRAKPGWLIVISGHTDNTGDPAFNQQLSLQRAEAVRN 457
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ G + +V+G+ P+ TNDT GR N+R++I++ P+ +
Sbjct: 458 WMRDTGAIAESCFAVQGYGVSRPLVTNDTPEGRATNRRVDIRLVPQAD 505
>gi|169633170|ref|YP_001706906.1| hypothetical protein ABSDF1479 [Acinetobacter baumannii SDF]
gi|169151962|emb|CAP00823.1| conserved hypothetical protein; putative bacterial outer membrane
domain [Acinetobacter baumannii]
Length = 471
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 4/179 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ L + + + + + +SL ++ +
Sbjct: 295 KITLKAGDAAALEALTAKVKALVPHTEVVATAPETAEQSVSNSLSASQTALTAIDPNN-- 352
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + + + + +L AT+LNK + + HTDS G
Sbjct: 353 -VDENALVKALNLQIINFASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDSTGNA 411
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL+ +GV +++ + +G + P+ N T+ GR N+RIE +
Sbjct: 412 AANKALSQRRAQAVVDYLVSKGVDASKLV-AKGHGSEQPVADNTTEEGRFKNRRIEFSV 469
>gi|124003886|ref|ZP_01688734.1| OmpA/MotB, putative [Microscilla marina ATCC 23134]
gi|123990941|gb|EAY30408.1| OmpA/MotB, putative [Microscilla marina ATCC 23134]
Length = 389
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++ L P L + +L P + I HTD++GT NL +S R
Sbjct: 281 VILKNIFFEFAKARLLPASFPELDKLVNLLTTHPQIKVRIMGHTDNVGTDTRNLQLSNRR 340
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + +++ ++ +GF PID+N TK GRQ N+R+E +
Sbjct: 341 AKSVV-TYLKKQGIRANRLTFKGFGESRPIDSNVTKEGRQKNRRVEFVVL 389
>gi|254420406|ref|ZP_05034130.1| OmpA family protein [Brevundimonas sp. BAL3]
gi|196186583|gb|EDX81559.1| OmpA family protein [Brevundimonas sp. BAL3]
Length = 183
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 72/179 (40%), Gaps = 10/179 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
G + + SGC + +V + + T + A Q +
Sbjct: 13 GALIALGFAASGCASHRFVRDQVEVVDTRVTGVEG--------TAGQALQRANDAHKLAE 64
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLK 124
+ + L + L A L + + + IQ +TD+ G ++
Sbjct: 65 GKFLYQVVLSDDSVKFPTDASALSPEAEQRLAQFAQRLRDENKNVYLEIQGYTDATGPVE 124
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+N + ++RA+ ++ +L ++GV+ NR ++ + + P+ +NDT GR N+R+ I +
Sbjct: 125 HNNQLGEQRAEAVRRFLNRQGVALNRMSTIS-YGPEEPVASNDTPEGRSQNRRVTIVVL 182
>gi|332879143|ref|ZP_08446844.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332682943|gb|EGJ55839.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 454
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 14/180 (7%)
Query: 17 GCGLASREK--------KKVFLHKSNDT----DIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
GC A + + K N+ D D+ +E
Sbjct: 275 GCPDADNDGIADKDDKCPQQAGPKENNGCPWPDRDGDGVLDKDDECPEEAGPASNKGCPE 334
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V++ + F + + + +L I +LNK+ ++ +++ +TD+ G
Sbjct: 335 VTQEVQTQLNSFAKTILFDVGKSTIRPESATVLNNIVNVLNKYKNSKFSVEGYTDTSGNK 394
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S++RA +K+YL+ + + +S +GF + PI +N TK GR+ N+R+EI +
Sbjct: 395 DKNQRLSEDRAYSVKAYLVDK-GINPARLSAKGFGPEKPIASNKTKKGRELNRRVEINLV 453
>gi|294142621|ref|YP_003558599.1| OmpA family protein [Shewanella violacea DSS12]
gi|293329090|dbj|BAJ03821.1| OmpA family protein [Shewanella violacea DSS12]
Length = 200
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 75/176 (42%), Gaps = 4/176 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ +++ +T +S C + + + + + + G
Sbjct: 2 KTFITLLAITLLSACSSIVTMDGNTTQVHDLNDMDKDGVIVARERCNDTLLGASIDNYGC 61
Query: 64 -VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V I D I + +++ + +++IA +N FP+T + I+ H G+
Sbjct: 62 GKVKPIHDRSELKI---LFPNDSYYIDPMYYDQVEVIAVFMNDFPNTNVTIEGHCSKTGS 118
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
++NL +SQ RA+ + S L + ++ ++ G++Y P+D +DT + N+R+
Sbjct: 119 YEHNLALSQNRANAVTSLLAEHYSIASDRLTAIGYSYDRPVDESDTDMAHTRNRRV 174
>gi|313682225|ref|YP_004059963.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994]
gi|313155085|gb|ADR33763.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994]
Length = 283
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 6/157 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
+ ++ + + Q + + VS + +P +V F L
Sbjct: 116 EAETQKRNEIYARFVGKLQKMIDAGKLTVSIENGRLVINLPENVLFPTGRTTLNAGGSET 175
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRF 151
L+ IA +L + P I+ HTD++ +N +S RA + +I
Sbjct: 176 LKEIADVLKELPERRFQIEGHTDTVPIHNDRFASNWELSSGRALRVVHLMIDE-GVQPAN 234
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
IS G+ P N+T G+ N+RIEI + P ++
Sbjct: 235 ISAAGYGEFQPRADNNTTEGKALNRRIEIVMLPNLDL 271
>gi|184157492|ref|YP_001845831.1| outer membrane protein [Acinetobacter baumannii ACICU]
gi|332872459|ref|ZP_08440430.1| OmpA family protein [Acinetobacter baumannii 6014059]
gi|183209086|gb|ACC56484.1| Outer membrane protein [Acinetobacter baumannii ACICU]
gi|332739345|gb|EGJ70201.1| OmpA family protein [Acinetobacter baumannii 6014059]
Length = 471
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 4/179 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ L + + + + + +SL ++ + +
Sbjct: 295 KITLKAGDAAALEALTAKVKALVPHTEVVAAAPETAEQSVSNSLSASQTALT-AIDPNNV 353
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V+ + + I + +L AT+LNK + + HTDS G
Sbjct: 354 DVNALVKALNLQIIN--FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDSTGNA 411
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL+ +GV +++ + +G + P+ N T+ GR N+RIE +
Sbjct: 412 AANKALSQRRAQAVVDYLVSKGVDASKLV-AKGHGSEQPVADNTTEEGRFKNRRIEFSV 469
>gi|193076900|gb|ABO11623.2| OmpA/MotB [Acinetobacter baumannii ATCC 17978]
Length = 471
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 4/179 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ L + + + + + +SL ++ + +
Sbjct: 295 KITLKAGDAAALEALTAKVKALVPHTEVVAAAPETAEQSVSNSLSASQTALT-AIDPNNV 353
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V+ + + I + +L AT+LNK + + HTDS G
Sbjct: 354 DVNALVKALNLQIIN--FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDSTGNA 411
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL+ +GV +++ + +G + P+ N T+ GR N+RIE +
Sbjct: 412 AANKALSQRRAQAVVDYLVSKGVDASKLV-AKGHGSEQPVADNTTEEGRFKNRRIEFSV 469
>gi|322835249|ref|YP_004215275.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
gi|321170450|gb|ADW76148.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
Length = 558
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 53/112 (47%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L+ L ML + P +I + HTD G K N +S +RA ++
Sbjct: 437 SLFDTGKYELKPGSLKMLVNTLVDIKAKPGWLIVVAGHTDITGDAKANQTLSLKRAGSLR 496
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+++ S +V+G+ P+ TNDT GR N+R+EI + P+ + K
Sbjct: 497 DWMLSTSDVSPTCFAVQGYGATRPVATNDTPEGRAANRRVEISLVPQADACK 548
>gi|239503512|ref|ZP_04662822.1| OmpA family protein [Acinetobacter baumannii AB900]
Length = 471
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 4/179 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ L + + + + + +SL ++ + +
Sbjct: 295 KITLKAGDAAALEALTAKVKALVPHTEVVAAAPETAEQSVSNSLSASQTALT-AIDPNNV 353
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V+ + + I + +L AT+LNK + + HTDS G
Sbjct: 354 DVNALVKALNLQIIN--FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDSTGNA 411
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL+ +GV +++ + +G + P+ N T+ GR N+RIE +
Sbjct: 412 AANKALSQRRAQAVVDYLVSKGVDASKLV-AKGHGSEQPVADNTTEEGRFKNRRIEFSV 469
>gi|270159822|ref|ZP_06188478.1| peptidoglycan-associated lipoprotein [Legionella longbeachae
D-4968]
gi|289165420|ref|YP_003455558.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella longbeachae NSW150]
gi|269988161|gb|EEZ94416.1| peptidoglycan-associated lipoprotein [Legionella longbeachae
D-4968]
gi|288858593|emb|CBJ12474.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella longbeachae NSW150]
Length = 175
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 58/178 (32%), Gaps = 15/178 (8%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+LGL + + ++ C A L + + F Q
Sbjct: 8 KLGLLVASVILVAACSKAPGSADGAALAEGEASAQGLG--------QFTHFAGQEPGESY 59
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + + L K+LP + A L P + + HTD G+
Sbjct: 60 TTQAPHNQLYL------FSYDDSNLAPKYLPSVNAQAEYLKTHPGARVLLAGHTDERGSR 113
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA+ + L + + I V + + PI+ N+R+E
Sbjct: 114 EYNVALGERRANTVADILRMA-GVNRQQIRVVSYGKERPINLGHDDASHAQNRRVEFT 170
>gi|153877096|ref|ZP_02004079.1| OmpA domain protein [Beggiatoa sp. PS]
gi|152066440|gb|EDN65921.1| OmpA domain protein [Beggiatoa sp. PS]
Length = 155
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
Q++ TG + + + IT + + ++ ++ ++ +Q ++ + K+PST IQ
Sbjct: 22 SQIETTGCRILEVPEEITLTV---LFDTNKSMVKSEYYAEIQQVSDFMAKYPSTSTEIQG 78
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTDS G+ NL +SQ+RAD + LI + S ++ G+ PI N T+ GRQ N
Sbjct: 79 HTDSSGSDDYNLNLSQQRADAVLEVLISQFNISPSRLAAVGYGESQPIADNSTREGRQQN 138
Query: 176 QRIEIQI 182
+R+ +I
Sbjct: 139 RRVVARI 145
>gi|145219523|ref|YP_001130232.1| OmpA/MotB domain-containing protein [Prosthecochloris vibrioformis
DSM 265]
gi|145205687|gb|ABP36730.1| OmpA/MotB domain protein [Chlorobium phaeovibrioides DSM 265]
Length = 229
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 31/216 (14%)
Query: 2 IKE--LGLSMFIMTTIS-GCGLASREKKKVF-----------LHKSNDTDIVNKR----- 42
+K L + MT+++ GC + L S V
Sbjct: 7 MKRPITLLLILAMTSLTWGCESTRNTGRGAGIGAAAGGVLGGLIGSKTGSWVQGAAIGAV 66
Query: 43 --------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF-L 93
G+ +DK +E Q+ G V R+G+ I + F +
Sbjct: 67 VGGAAGALIGNYMDKQAEEIDSQV--EGARVERVGESIRVVFDSGILFSTGSSTLTSTSR 124
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
++ +A ILN++ +T + I+ HTD+IG N +S+ RA+ + + L+ S +S
Sbjct: 125 YNIEKLARILNRYSNTNLVIEGHTDAIGAESLNQTLSERRAESVAN-LLAGYGVSRYRLS 183
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
G+ PI +N+T+ GR+ N+R+E+ I +K
Sbjct: 184 PVGYGETRPIASNETEYGRRLNRRVEVLISANDELK 219
>gi|77457293|ref|YP_346798.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77381296|gb|ABA72809.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
Length = 264
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 6/138 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ D+ + Q L + + ++ L+ L + +A L
Sbjct: 115 DARDQQIKQLQDSLNA-----KQTDRGTLVTFGDVLFATNKADLKSSGLVNINKLAQFLQ 169
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ P + ++ +TDS G+ N +S+ RA + + + I V+G+ +YP+
Sbjct: 170 ENPDRKVIVEGYTDSTGSASYNQSLSERRATSV-QVALIKMGVDPSRIVVQGYGKEYPVA 228
Query: 165 TNDTKVGRQNNQRIEIQI 182
N + GR N+R+E+ I
Sbjct: 229 DNGSVSGRAMNRRVEVTI 246
>gi|326799764|ref|YP_004317583.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326550528|gb|ADZ78913.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 169
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF-PSTVIAIQSHTD 118
G VSR + + V F + +L +K ++ + +NK P+ I I HTD
Sbjct: 45 EGGTVSRTDEGVVLTFESDVLFATNSSYLSEKAKVTMKNMVAYINKNYPNAQIQINGHTD 104
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S G N +S++RA +K+Y + + I +G+ P+ TN T GRQ N+R+
Sbjct: 105 STGEADYNQWLSEKRAASVKNYAVS-IGLNGSNIKTKGYGKSKPVATNSTADGRQKNRRV 163
Query: 179 EIQIF 183
E+ I
Sbjct: 164 EVIIL 168
>gi|310823400|ref|YP_003955758.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309396472|gb|ADO73931.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 611
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 3/171 (1%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
+ C K+ S+ ++ + E D+ V D I
Sbjct: 408 VLDACPDKPGPKEYDGCPDSDGDEVPDNVDDCPDLSGPPENNGCPYDSPPFVLVESDRIR 467
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ + ++K+ +L +A++L + P+ + I+ HTD++G+ N+ +SQ
Sbjct: 468 IK-GNILFETGQAKIQKQSFKLLDEVASVLRRNPTLGPVLIEGHTDNVGSRNYNVDLSQR 526
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + YL +G+ R +S +GF + PI TNDT +GR N+R+E ++
Sbjct: 527 RAKAVLDYLAGKGIDRKR-LSSKGFGFDQPIATNDTPLGRAKNRRVEFRLI 576
>gi|115372712|ref|ZP_01460018.1| hypothetical protein STIAU_6203 [Stigmatella aurantiaca DW4/3-1]
gi|115370193|gb|EAU69122.1| hypothetical protein STIAU_6203 [Stigmatella aurantiaca DW4/3-1]
Length = 334
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 3/171 (1%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
+ C K+ S+ ++ + E D+ V D I
Sbjct: 131 VLDACPDKPGPKEYDGCPDSDGDEVPDNVDDCPDLSGPPENNGCPYDSPPFVLVESDRIR 190
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ + ++K+ +L +A++L + P+ + I+ HTD++G+ N+ +SQ
Sbjct: 191 IK-GNILFETGQAKIQKQSFKLLDEVASVLRRNPTLGPVLIEGHTDNVGSRNYNVDLSQR 249
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + YL +G+ R +S +GF + PI TNDT +GR N+R+E ++
Sbjct: 250 RAKAVLDYLAGKGIDRKR-LSSKGFGFDQPIATNDTPLGRAKNRRVEFRLI 299
>gi|307823678|ref|ZP_07653906.1| peptidoglycan-associated lipoprotein [Methylobacter tundripaludum
SV96]
gi|307734972|gb|EFO05821.1| peptidoglycan-associated lipoprotein [Methylobacter tundripaludum
SV96]
Length = 191
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 9/188 (4%)
Query: 2 IK--ELGLSMFI-MTTISGCG-----LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
+K + L++ I +SGC + + + ND GS L +E
Sbjct: 1 MKLNKTVLALAISAVILSGCSEDEKDASLTDGTQNTASGINDASTSGLNNGSGLSGSEMN 60
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ GI + ++ F+P++ A L P + +
Sbjct: 61 ASGMYPNAGIGPEFSDPNNPLSKSTIYFMLDSSQVQDDFVPVIAAHAQYLVAHPGQRVVM 120
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ H D G+ + N+ + ++RA I S + + ++ + V + + P + +
Sbjct: 121 EGHGDERGSREYNIALGEQRAKSIASMMKVQ-GVADGQLEVVSYGEEKPASLGHDEASWE 179
Query: 174 NNQRIEIQ 181
N+R+E+
Sbjct: 180 LNRRVELV 187
>gi|117621021|ref|YP_857806.1| flagellar motor protein MotB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562428|gb|ABK39376.1| sodium-driven polar flagellar protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 299
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 7/174 (4%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQDTGIVVSRIGDMITC 74
+G S EK + + ++L KA D+ + Q+QD I V +G I
Sbjct: 111 AGGHDKSEEKLVGGDTQQEAQKQQQQEQSNALAKALADQMKAQIQDGAIEVEALGQQIII 170
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLI 129
I +F FL+ +F P+++ +A +L P I I HTD ++N +
Sbjct: 171 RIREKAAFPAGSAFLQPQFWPVVRKVAALLKDVPG-EITISGHTDDAATEDELFQSNWEL 229
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S +RA + +I+ + V+G A P+ N + R+ N+R+EI I
Sbjct: 230 SSQRAVAVAHQMIKVPGFDGGRLVVQGMADSQPLVPNTSPENRRMNRRVEISIM 283
>gi|260767782|ref|ZP_05876717.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
gi|260617291|gb|EEX42475.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
Length = 332
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + ++ L + LN+ P + I HTDS G N +S++RA
Sbjct: 218 LDSKSFAHNSAKMSEEGKAQLGDLVAFLNEHPQANVEITGHTDSTGAEAYNQKLSEKRAQ 277
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L ++G+ + R I+ +G PI +N T GR+ N+R+EI I
Sbjct: 278 GVSDALQEQGIDAAR-ITAKGEGESNPIASNATAAGREQNRRVEIVI 323
>gi|322421034|ref|YP_004200257.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320127421|gb|ADW14981.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 292
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 70/176 (39%), Gaps = 10/176 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
R + +V + + V K + D E + ++ + +S + +T +
Sbjct: 119 ADNKRLRDEVARLQKLKEEEVQKTSKTYSDLLEQ-MKGEMAKGQVTISELKGKLTVNMVD 177
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG-------TLKNNLLIS 130
V F + ++ + L +LQ + IL V+ I+ HTD++ N +S
Sbjct: 178 SVLFDSGKAEVKPEGLVVLQKVIDILKNIKDKVVRIEGHTDNVQIVGQLAKRYPTNWELS 237
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
RA + +Q+ ++ + P+ NDT GR N+RIEI + +
Sbjct: 238 AARAINVTR-YLQQQGLDPALLAAVAYGEHKPVAPNDTDEGRAKNRRIEIVLVAKE 292
>gi|237800117|ref|ZP_04588578.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022973|gb|EGI03030.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 260
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 74/180 (41%), Gaps = 13/180 (7%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYI 76
+ ++ ++ +S D+A+ + + +
Sbjct: 82 TNQRVELAKQTIALRTSEAALQNASADRAKARLDARDAQIAALKNSLNAKQTERGTLVTF 141
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ L+ + +A+ L + P + ++ +TDS G+ N +S+ RA+
Sbjct: 142 GDVLFDYNKADLKPTAQGDIGKLASFLQENPDRKVIVEGYTDSTGSASYNQSLSERRANS 201
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-------PRGNIK 189
++ L++ GV R ++ G+ +YP+ N + GR N+R+E+ I PR ++K
Sbjct: 202 VRMALVRMGVDPARVVT-MGYGKEYPVADNTSNSGRAMNRRVEVTISNDNQPVAPRSSMK 260
>gi|34763981|ref|ZP_00144872.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27886240|gb|EAA23525.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 315
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
S + + + + F + L + +L+ +A +L + + HTDS + K
Sbjct: 197 SIEANSLLITLDSGILFDVDKYDLRPEAEEVLKNLAIVLKEADIKAFEVDGHTDSDASDK 256
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N ++S+ RA+ +K++L +G+++ I+++G+ PI +NDT G+Q N+R+EI I
Sbjct: 257 HNRILSENRANAVKNFLTSQGITAE--ITIKGYGESRPIASNDTAEGKQKNRRVEIII 312
>gi|327404889|ref|YP_004345727.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320397|gb|AEA44889.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 688
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
L + I + I + V++ L + ++ + ++ P I I
Sbjct: 560 DNLVNKVIELKNIAIGSKIALRNIFFDVNKATLRPESNAEMERLVQLMKDVPRLKIEISG 619
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD+ G+ N +SQ+RA+ + +YL+ +G+++NR I +G+ PI +N+++ G+Q N
Sbjct: 620 HTDNTGSATLNETLSQQRAEAVVAYLVSKGIAANRMI-AKGYGSSQPIASNNSEDGKQQN 678
Query: 176 QRIEIQIFPRGN 187
+R E +I +GN
Sbjct: 679 RRTEFEI--KGN 688
>gi|303248961|ref|ZP_07335208.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
gi|302489684|gb|EFL49620.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
Length = 261
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 68/166 (40%), Gaps = 5/166 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S+ ++ ++ + + + ++ D + + ++ I V + + + +
Sbjct: 48 SKADERKAEARAVELERKTQELQTAYDALVADLRGEVDSRDIRVRQFREKLEINFVDKIL 107
Query: 82 F-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADV 136
F + + +L+ + +L K I + HTDS +N +S R+
Sbjct: 108 FASGSAEITPRGREILRKVGGVLAKVKDKSIYVVGHTDSNPIHSALYPSNWELSTARSAS 167
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +L + G + + G A+ P+ +N T GR N+R++I +
Sbjct: 168 VIRFLSESGGVTPERFTAMGRAFYQPVASNATPEGRHENRRVDIIV 213
>gi|256785509|ref|ZP_05523940.1| secreted protein [Streptomyces lividans TK24]
Length = 206
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 71/194 (36%), Gaps = 17/194 (8%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL--------DKAEDEFQ 55
L ++ +M + CG + + D A
Sbjct: 6 RLLAAVTLMLATTVCGTTTAHADDDPNDPPGTEPSASAPVEVDPNDPDLKLPDGATLAQA 65
Query: 56 MQLQDTGIVVSRIGDM--------ITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
L +V + GD +T + V F L + ++ IA +
Sbjct: 66 KVLDIKSVVEEQSGDERREDTNTSVTLALQAEVLFGKDSSKLGAEAKSRIRGIADEIRAQ 125
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+T + + TD +G+ + ++S+ RA+ + L Q + VRG+ +YPI N
Sbjct: 126 NATRVRVFGFTDDLGSSAHGDVLSKRRANAVHDVLSQSLNDAGITYEVRGYGEQYPIADN 185
Query: 167 DTKVGRQNNQRIEI 180
T+ GR+ N+R+E+
Sbjct: 186 STEAGRKKNRRVEV 199
>gi|189499949|ref|YP_001959419.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
BS1]
gi|189495390|gb|ACE03938.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides BS1]
Length = 229
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + + L + G +D E Q+ G V R+G+ I
Sbjct: 51 GSQTGSWGRGALLGAVIGGGAGALIGDYMDDQAKEIDNQV--DGAQVERVGEGIRVVFDT 108
Query: 79 HVSFVSEVFLEKKFLP-MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ F + +Q +A ILNK+ T I ++ HTDS G+ N +S++RA+ +
Sbjct: 109 GLLFSTGSSTLTSTSSYNIQKLANILNKYSDTDIVVEGHTDSQGSETYNQQLSEKRAESV 168
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
S L VS +R IS G+ P+ +N+T GR+ N+R+E+ I+ N+
Sbjct: 169 SSLLRAYNVSKSR-ISTIGYGETRPVASNETASGRKLNRRVEVLIYANDNL 218
>gi|323495404|ref|ZP_08100481.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
gi|323310327|gb|EGA63514.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
Length = 324
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ ++ L+ + L + LN +P + + +TDS G + N ++S++RA+
Sbjct: 210 LGTGSFELNSTQLKPESASQLDELVEFLNTYPQAKVEVIGYTDSSGAAEYNQVVSEKRAE 269
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ S +++ I+ RG P+ +NDT+ GRQ N+R+E+ +
Sbjct: 270 SVAS-TLEQKGIDASRITARGEGENNPVASNDTREGRQQNRRVEVIV 315
>gi|311695725|gb|ADP98598.1| OmpA/MotB domain protein [marine bacterium HP15]
Length = 269
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + + ++ L+ + +A + ++ + + ++ +TDS
Sbjct: 139 EAMQAEQTDRGMVLTLGDVLFDLNRAELKPAGETTVGRLAEFMAEYENRRVRVEGYTDST 198
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G N +S+ RA+ ++ L+ RG++ R I V+GF +YP+ TN+T GRQ N+R+EI
Sbjct: 199 GAESYNQQLSERRAEAVREALMDRGINRAR-IEVQGFGEQYPVATNETPAGRQQNRRVEI 257
Query: 181 QIF-PRGNIKK 190
I GNIK+
Sbjct: 258 VISDADGNIKE 268
>gi|225873103|ref|YP_002754562.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
gi|225791640|gb|ACO31730.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
Length = 508
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
++ E + L + + V ++ L IA IL +P
Sbjct: 347 NRLEQQLNAVLA-----TRESARGLIVNMSDVVFATGSYQIKTSAQIKLARIAGILMTYP 401
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ ++ +TD++G+ N +S +RA+ + +LI + IS +G+ P+ +N+
Sbjct: 402 GLKVQVEGYTDNVGSAAFNQKLSNQRANAVMKFLISQ-GVKANSISAKGYGEADPVASNN 460
Query: 168 TKVGRQNNQRIEIQI 182
T GR N+R+++ +
Sbjct: 461 TVAGRAKNRRVQLVV 475
>gi|209168561|gb|ACI42276.1| putative outer membrane protein [Vibrio alginolyticus]
Length = 213
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 80/198 (40%), Gaps = 12/198 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K + L + + IS C + + + + + D D +E +
Sbjct: 9 IMKHITL-IALSLMISACSSSDKGDEYDY-IDTPIADQWADHIDDDSDGVINE-RDLCPG 65
Query: 61 T--GIVVSRIGDMITC----YIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAI 113
T G + G + + V F ++ + F ++ ++ L ++P+T I I
Sbjct: 66 TPLGAEIDNDGCGSYVDSSQEMQIRVLFANDSDVINPIFTQQIRELSDFLKEYPNTSIEI 125
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
Q + GT ++NL +S+ RA+ ++ L+ S +++ G+ +V
Sbjct: 126 QGYASRTGTAEHNLDLSKRRAENVRKELMTN-GISGDRVTIVGYGDTVLATQGTDQVSHA 184
Query: 174 NNQRIEIQIFP-RGNIKK 190
N+R+ + +G +KK
Sbjct: 185 LNRRVTATVIGHKGEVKK 202
>gi|197336770|ref|YP_002158098.1| outer membrane protein [Vibrio fischeri MJ11]
gi|197314022|gb|ACH63471.1| outer membrane protein [Vibrio fischeri MJ11]
Length = 208
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 1 MIKELGLSMFIMTTISGCG--------LASREKK----------KVFLHKSNDTD----I 38
M++ L +F GC A + K+ + + +T
Sbjct: 1 MLR--LLPLFASLLFVGCAPQGSSLLDTAPKTKEDAPFPDFENPETAPVEEMETSEMTRA 58
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVS-EVFLEKKFLPML 96
+ G D + QL + GI ++G D + I V F S + L +L
Sbjct: 59 LTGPNGELKDDDMRQVAQQLTNMGIQYHKVGNDQLVISIQEKVHFSSAKAELTPLARSLL 118
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ +++ P + + HTD G N +S++R++ ++ YL+ +++++ S RG
Sbjct: 119 NKLIVVMSSKPELALVLDGHTDVTGDPIKNQNLSEQRSNEVRRYLLANKLNASQLYS-RG 177
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIF 183
F P+ NDT +GR+ N+R+EI I
Sbjct: 178 FGEYLPLCDNDTILGRKCNRRVEITIL 204
>gi|160898836|ref|YP_001564418.1| peptidoglycan-associated lipoprotein [Delftia acidovorans SPH-1]
gi|160364420|gb|ABX36033.1| peptidoglycan-associated lipoprotein [Delftia acidovorans SPH-1]
Length = 180
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 61/179 (34%), Gaps = 5/179 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK L L++ + ++GC + + + G+ + L +
Sbjct: 4 IKRLSLALAVTALMAGCSSGVKLDETPVTDAGATSTGQGSGAGTGSTSQSGISGVDLTGS 63
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + ++ P ++ A L + + I+ HTD G
Sbjct: 64 AADKAGPQGVSRV----VYFDFDSYVVKADAQPQIEAHARFLKASSARKVQIEGHTDERG 119
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL + Q+RA+ ++ + S+ + + + P ++ N+R E+
Sbjct: 120 GREYNLALGQKRAEAVRR-SLGLLGVSDAQMEAVSYGKEKPAAEGHSEDAYAQNRRAEL 177
>gi|42524180|ref|NP_969560.1| putative outer membrane protein [Bdellovibrio bacteriovorus HD100]
gi|39576388|emb|CAE80553.1| putative outer membrane protein [Bdellovibrio bacteriovorus HD100]
Length = 214
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 72/211 (34%), Gaps = 34/211 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKV---------------------------FLHKS 33
M K L + + +SGC L +
Sbjct: 1 MKKMLLIGTAVAMMLSGCATTQENPNTAKGAGIGAAIGAVAGAVIGHQTGKRNEGALIGA 60
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKF 92
+ G LDK + E R + + + F + L+
Sbjct: 61 ALGAGIGGTVGHRLDKQQKELAKI-----AETKRTEQGLITKLKSDILFDTGKADLKPAA 115
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+ +A I+ K+P ++ ++ +TD G+ N +S++RA + + L+ + +
Sbjct: 116 QTNINQLAAIMKKYPENILTVKGYTDDTGSQMVNNPLSEQRAKAVSAQLVAA-GVPAQTV 174
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ G P+D TK R N+R+EI+I
Sbjct: 175 TSIGMGALNPVDPAKTKEARAKNRRVEIEIT 205
>gi|327403673|ref|YP_004344511.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327319181|gb|AEA43673.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 223
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 54/147 (36%), Gaps = 1/147 (0%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + + + +V + L+ L
Sbjct: 78 QSIGDEIEYNTLEIPSAKPGEYFEEAELVIEYDPGSVFSFTNLQFETGKSDLKPISYGAL 137
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ I+ + I I HTDS G + N +SQ+RA+ +++YLI + + +G
Sbjct: 138 NNLVEIMKRKKEIKIQIDGHTDSDGDNQANQQLSQKRAESVRNYLISK-GIDATRVKAKG 196
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIF 183
PI N+T G+ N+R EI I
Sbjct: 197 NGESKPIADNNTAQGKAQNRRTEITIL 223
>gi|33863187|ref|NP_894747.1| outer membrane protein [Prochlorococcus marinus str. MIT 9313]
gi|33635104|emb|CAE21090.1| Bacterial outer membrane protein [Prochlorococcus marinus str. MIT
9313]
Length = 214
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ + D IVV + +++ + + L+ + LQ +A + + +
Sbjct: 74 QAIEYPIDDLNIVVEKEKEILIELAADVLFDFDKANLKPSAIKSLQGVAKRIRESSRGDV 133
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV- 170
I+ HTDS G+ + N +S++RA ++ + + G SN + +G P+ +N T+
Sbjct: 134 RIEGHTDSKGSNEYNQTLSEKRAISVRDWFVSEGGLSNVQFATKGLGELKPVVSNTTEEG 193
Query: 171 -----GRQNNQRIEIQI 182
GRQ N+R+EI I
Sbjct: 194 ADDPIGRQRNRRVEIII 210
>gi|302343856|ref|YP_003808385.1| peptidoglycan-associated lipoprotein [Desulfarculus baarsii DSM
2075]
gi|301640469|gb|ADK85791.1| peptidoglycan-associated lipoprotein [Desulfarculus baarsii DSM
2075]
Length = 179
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 61/187 (32%), Gaps = 15/187 (8%)
Query: 2 IKELGLSM------FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+K+ + F M ++GC K+KV + + + +
Sbjct: 1 MKKFAIFAMVAALCFSMAMVAGCS-----KQKVAGPGELSAEEQARLAAERERRLREARL 55
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ Q G + L + +L A L++ P + ++
Sbjct: 56 AEEQARGGEQTMRE---IFENQDVHFDYDRYDLSAEAKQILNDKAQFLSQHPEVTVIVEG 112
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
H D G+ N+ + ++RA + ++ + V + + P+ +T+ N
Sbjct: 113 HCDERGSNSYNMALGEKRAR-ACEQYLMAMGVASDRLEVVSYGEERPLVPGNTEEAYAAN 171
Query: 176 QRIEIQI 182
+R I
Sbjct: 172 RRGHFVI 178
>gi|110637965|ref|YP_678172.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC
33406]
gi|110280646|gb|ABG58832.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC
33406]
Length = 641
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
D I + +I T + V++ L K+ L + IL+K P I + HTDS
Sbjct: 517 DDVICLDKIDIGTTIVLNNVFFDVNKSTLRKESETELDKLFDILSKNPKIKIEVAGHTDS 576
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G + NL +S RA +K YLI +G+S++R I V G P+ NDT +Q N+R E
Sbjct: 577 DGDTQANLTLSDARAHTVKDYLIGKGISADRIIYV-GHGEGKPVVPNDTPENKQLNRRTE 635
Query: 180 IQIFPR 185
I+I
Sbjct: 636 IKILEN 641
>gi|315179386|gb|ADT86300.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218]
Length = 332
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 62/162 (38%), Gaps = 10/162 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ + + + E + ++ + + +
Sbjct: 171 GNDNQPAPVMAEEQPVAEPQPVVEQAPVQEPVAAEPKMVTKTVAFQK--------LDSKS 222
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + ++ L + LN+ P + I HTDS G N +S++RA +
Sbjct: 223 FAHNSAKMSEEGKAQLGDLVAFLNEHPQANVEITGHTDSTGAEAYNQKLSEKRAQGVSDA 282
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L ++G+ + R I+ +G PI +N T GR+ N+R+EI I
Sbjct: 283 LQEKGIDAAR-ITAKGEGESNPIASNATAAGREQNRRVEIVI 323
>gi|308274998|emb|CBX31597.1| hypothetical protein N47_E51090 [uncultured Desulfobacterium sp.]
Length = 315
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 3/150 (2%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ K E + ++ + + I + + ++ L+
Sbjct: 161 AKQESQAMSLEAEQARKKAAELKAEI--DKLQAKQTDRGIVLTLGDVLFANNKANLQPGA 218
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+ + +A L K ++ I+ HTDS G+ NL +SQ RAD ++ L+ RG+ R
Sbjct: 219 MRTIDQLAEFLKKHAERMVVIEGHTDSRGSDTYNLGLSQRRADAVRDALVARGIDQARIQ 278
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ G YP+ +NDT GRQ N+R+EI I
Sbjct: 279 TI-GKGEVYPVASNDTSAGRQQNRRVEIII 307
>gi|121533429|ref|ZP_01665257.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
gi|121307988|gb|EAX48902.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
Length = 262
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
+ + I + D + I F L+ + L + IA ++
Sbjct: 113 KQLDRYIAESNLAGDIQTALTDDGLMIRIKDTALFASGRAELKPESLRLGTEIARMIAPL 172
Query: 107 PSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ + HTD++ N +S +RA Y++ + ISV G+ P
Sbjct: 173 SQ-RVIVAGHTDNMPINTPEFPSNWDLSTKRALNFMKYMLSQAEIKPERISVSGYGEYRP 231
Query: 163 IDTNDTKVGRQNNQRIEIQIF 183
+ +NDT+ GR N+R+E+ I
Sbjct: 232 VASNDTEEGRAKNRRVEVLIM 252
>gi|254428815|ref|ZP_05042522.1| OmpA family protein [Alcanivorax sp. DG881]
gi|196194984|gb|EDX89943.1| OmpA family protein [Alcanivorax sp. DG881]
Length = 356
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 6/164 (3%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ-MQLQDTGIVVSRIGDMITCYIPVHVS 81
++ + + D + DK + Q ++ G +++ T
Sbjct: 198 ETREVEKVVEVAAADSDGDGIPDNRDKCPNTIQGAKVDGDGCLLTNQ----TITFNNIGF 253
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
++ L P++ + L + + I HTDS G+ + N +S ERA ++ YL
Sbjct: 254 ELNSAKLTATSRPLVDRLVKALKSQTNFDVEIAGHTDSTGSAEYNETLSDERAKAVRQYL 313
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
I GV++ R ++ RG+ P+ +N+T GR N+R+E ++ +
Sbjct: 314 IDNGVAAER-LTARGYGEVVPVASNETSSGRAMNRRVEFRVSEQ 356
>gi|347155|gb|AAC36900.1| protein F [Pseudomonas fluorescens]
Length = 317
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P T ++ HTDS+G N +SQ RAD +
Sbjct: 215 DVKFDFDKSVVKPNSYGDVKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSQRRADAV 274
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
K ++ + + +S G+ P+ N T+ GR N+R+E
Sbjct: 275 KQ-VLVKDGIAPNRVSSVGYGKSRPVADNATEAGRAINRRVE 315
>gi|269968783|ref|ZP_06182772.1| outer membrane protein, putative [Vibrio alginolyticus 40B]
gi|269826595|gb|EEZ80940.1| outer membrane protein, putative [Vibrio alginolyticus 40B]
Length = 213
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 80/198 (40%), Gaps = 12/198 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K + L + + IS C + + + + + D D +E +
Sbjct: 9 IMKHITL-IALSLMISACSSSDKGDEYDY-IDTPIADQWADHIDDDSDGVINE-RDLCPG 65
Query: 61 T--GIVVSRIGDMITC----YIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAI 113
T G + G + + V F ++ + F ++ ++ L ++P+T I I
Sbjct: 66 TPLGAEIDNDGCGSYVDSSQEMQIRVLFANDSDVINPIFTQQIRELSDFLKEYPNTSIEI 125
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
Q + GT ++NL +S+ RA+ ++ L+ S +++ G+ +V
Sbjct: 126 QGYASRTGTAEHNLDLSKRRAENVRKELMTN-GISGDRVTIVGYGDTVLATQGTDQVSHA 184
Query: 174 NNQRIEIQIFP-RGNIKK 190
N+R+ + +G +KK
Sbjct: 185 LNRRVTATVIGHKGEVKK 202
>gi|126649533|ref|ZP_01721774.1| flagellar motor protein MotB [Bacillus sp. B14905]
gi|126593858|gb|EAZ87781.1| flagellar motor protein MotB [Bacillus sp. B14905]
Length = 254
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 73/216 (33%), Gaps = 36/216 (16%)
Query: 5 LGLSMFIMTTISGCGLASREK----------------------KKVFLHKSNDTDIVNKR 42
L L + + + +EK V ++ +
Sbjct: 26 LTLLLAVFIILFASSSVDQEKLERMSAVFSQVFDGGTSFLEQPSPVPSPNADSDQTPQQN 85
Query: 43 FGSSLDKAE-DEFQMQLQ--------DTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKF 92
D+ E E + + + + + I + F + ++ ++
Sbjct: 86 SAYLKDQQELAEIKDSVDNFIAVNEMEGQFATEMTDEGLLVTIRDSILFDPGQATIKPEY 145
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIG---TLKNNLLISQERADVIKSYLIQ-RGVSS 148
+P+ + +A +L P I I HTD++ +NL +S RA L+
Sbjct: 146 IPIAKELAGVLVSNPPRNIVITGHTDNVPAGPNFSSNLELSLMRASNFYMVLLDSNSQLK 205
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ S +G+ I NDT GR N+R+E+ I P
Sbjct: 206 SENFSAKGYGENRAIAPNDTAEGRAKNRRVEVLIQP 241
>gi|319952835|ref|YP_004164102.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319421495|gb|ADV48604.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 448
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC ++ V D+ + E Q QL D +
Sbjct: 296 GCPFLDKDGDGVLDKDDMCPDVAGTVANKGCPEVTAEVQKQLNDYARTI----------- 344
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + ++ ++ I TIL ++P+ ++ HTDS+G+ K N +S+ RA
Sbjct: 345 ---LFDTGKSSIKAASTSVMVDIITILKEYPNAKFTVEGHTDSVGSAKLNQSLSESRALS 401
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+K +L+++ +S G+ + PI +N T+ GR N+R+EI +
Sbjct: 402 VKEFLVEK-GIEEFRLSAIGYGEEKPIASNSTRAGRTQNRRVEINLV 447
>gi|283853943|ref|ZP_06371147.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
gi|283570664|gb|EFC18720.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
Length = 357
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 71/166 (42%), Gaps = 5/166 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S+E+++ ++ + + ++ D + + ++ I V + +M+ +
Sbjct: 48 SKEEERKAELRATELERKAGELQTAYDSLVADLKGEVDSKEIRVRQFREMLEINFVDKIL 107
Query: 82 F-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADV 136
F + + +L +A +L K I + HTD+ +N +S R+
Sbjct: 108 FGSGSADISPRGREVLLKVAAVLGKVKDKSIYVVGHTDAQPIHSALYPSNWELSTARSSS 167
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +L + G + + G ++ P+ +N T GRQ N+R++I +
Sbjct: 168 VIRFLSETGGLTPERFTAMGRSFYQPVASNATAEGRQENRRVDIIV 213
>gi|260494612|ref|ZP_05814742.1| OmpA family membrane protein [Fusobacterium sp. 3_1_33]
gi|260197774|gb|EEW95291.1| OmpA family membrane protein [Fusobacterium sp. 3_1_33]
Length = 396
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
S + + + + F + + + +L+ +A +L + I HTDS K
Sbjct: 278 SIEANSLLITLDSGILFDVDKYDVRPEAEEVLKNLAIVLKEADIKAFEIDGHTDSDAGDK 337
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N ++S+ RA+ +K++L +G+++ I+++G+ PI +NDT G+Q N+R+EI I
Sbjct: 338 HNQILSENRANAVKNFLTSQGITAE--ITIKGYGKTRPIASNDTPEGKQKNRRVEIVI 393
>gi|312887218|ref|ZP_07746822.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311300530|gb|EFQ77595.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 177
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 69/187 (36%), Gaps = 18/187 (9%)
Query: 1 MIKEL------GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
M+K ++M + + C + + + ++ + E
Sbjct: 1 MMKARKNYSVPVIAMLLAFCLPACKSKKEI--------AKPQPPLVEVVKKVPEEKKPEP 52
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
Q++ V D L+ PML +A + S +
Sbjct: 53 QVEAPKEVAPVVEKPDY---NFSNLQFEFDSAILKTSSYPMLDKVARAMKLDASVKFVLN 109
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
++ + GT ++NLL+S+ERA+ + + ++ +G+ PI N T+ GR
Sbjct: 110 GYSSAEGTPEHNLLLSEERANSV-KTYLLNAGVDASQLTAKGYGDSNPITPNTTEEGRVL 168
Query: 175 NQRIEIQ 181
N+R+EI+
Sbjct: 169 NRRVEIK 175
>gi|50956536|gb|AAT90783.1| conserved hypothetical protein [uncultured proteobacterium QS1]
Length = 575
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L+ +L + P +I I HTD G+ + NL +S+ RA ++
Sbjct: 445 SLFAPGSAELKPGSTKVLIAALVNIKAQPGWLIVIAGHTDVTGSPEQNLELSRARAASVR 504
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ + G + +V+GF P+ +NDT+VGR N+R++I++ P
Sbjct: 505 DWMQRMGDIPDSCFAVQGFGANQPVASNDTEVGRAANRRVDIRLVPE 551
>gi|108760432|ref|YP_632749.1| peptidoglycan-associated lipoprotein (Pal) family protein
[Myxococcus xanthus DK 1622]
gi|108464312|gb|ABF89497.1| peptidoglycan-associated lipoprotein (Pal) family protein
[Myxococcus xanthus DK 1622]
Length = 171
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 16/182 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREK--KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+ LS+ ++ GC + + + D+ E+ + +
Sbjct: 1 MNRTLLSLIAAVSLVGCASKQKPSSLTDNLPDQHRSPTATAATSTRNADEDEEAARRAMG 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ L + ML +AT L + P T + + HT
Sbjct: 61 S-------------LSADPVYFELDSATLRPESRDMLAQLATGLRERPLTRVTVSGHTCE 107
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+GT + N+ + RA V++ YL + +S+ F + P+ T+ + N+R E
Sbjct: 108 LGTTEYNIALGHRRAAVVRDYLR-NLGVESSQLSIVSFGEERPLSDAHTEDALRRNRRAE 166
Query: 180 IQ 181
Sbjct: 167 FT 168
>gi|90415360|ref|ZP_01223294.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
gi|90332683|gb|EAS47853.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
Length = 408
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 63/168 (37%), Gaps = 8/168 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
AS E L +K ++ + V R GD I +
Sbjct: 240 ASPESLDGDLSGRGSQAGEQAIADQY-EKIRARLSNEIAEGLAEVDRDGDKIVVRLAERG 298
Query: 81 SFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV--- 136
SF S L+ F P+L + + S++I I+ HTD+I + S
Sbjct: 299 SFRSGYADLQPSFKPLLDKVGESITD-GSSLITIEGHTDNIPMAFSERFRSNWDLSAARS 357
Query: 137 --IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL+ + +SV G A P+ ND+ GR N+RIE+ I
Sbjct: 358 AAVADYLLNSSEIDDGRVSVTGLADTKPLVPNDSPEGRSKNRRIEVII 405
>gi|300770385|ref|ZP_07080264.1| lipoprotein PG3 [Sphingobacterium spiritivorum ATCC 33861]
gi|300762861|gb|EFK59678.1| lipoprotein PG3 [Sphingobacterium spiritivorum ATCC 33861]
Length = 230
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIAT 101
G +DK E + + G V + + I + F ++ L+ + +
Sbjct: 78 IGKKMDKQAAEIENTVA--GAEVIKSDEGIIVKFDEGILFDFNKSDLKASAKTNISKLVA 135
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
LNK P T I + HTD+IG+L N +S+ RA +K+Y + +G++ R I+ G Y
Sbjct: 136 TLNKEPDTKILVIGHTDNIGSLAANQKVSEARAAAVKTYAVSQGLNGGR-INTEGKNYSE 194
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
P+ +NDT GR N+R+EI I +K+
Sbjct: 195 PLASNDTDAGRAENRRVEIVIVAGDKMKQ 223
>gi|254254076|ref|ZP_04947393.1| Outer membrane protein [Burkholderia dolosa AUO158]
gi|124898721|gb|EAY70564.1| Outer membrane protein [Burkholderia dolosa AUO158]
Length = 616
Score = 97.4 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 49/106 (46%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L+ + ++N P I + +TD+ G +NL +S+ RA ++
Sbjct: 502 SLFDSGKAQLKPGSNRAMVRAIEMINAHPGKRIVVAGYTDNAGNPDSNLRLSRARAQAVR 561
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+LI +++G+ PI +ND GR N+R+EI + P
Sbjct: 562 DWLIDASGIPATQFAIQGYGDTRPIASNDAPDGRARNRRVEITLVP 607
>gi|254429703|ref|ZP_05043410.1| OmpA family protein [Alcanivorax sp. DG881]
gi|196195872|gb|EDX90831.1| OmpA family protein [Alcanivorax sp. DG881]
Length = 368
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 11/160 (6%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH-----VSF 82
+ D D+ + +G VV G + +
Sbjct: 205 ATPAEVVTGDSDGDGVNDDKDRCPN------TASGAVVDADGCQVYESMQNRETSVIYFG 258
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
++ +F ++ +A LN I ++ H DS G N +S+ RA +K L+
Sbjct: 259 FDRDTIQGQFSDEIKGVADRLNAGEQGRIRVEGHADSTGPADYNQGLSERRAQSVKDRLM 318
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I+ GF P+ N T GR N+R +I +
Sbjct: 319 KDFSVGADKITTEGFGESKPVADNSTADGRAKNRRADIIV 358
>gi|347161|gb|AAC36903.1| protein F [Pseudomonas tolaasii]
Length = 317
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P T ++ HTDS+G N +SQ RAD +
Sbjct: 215 DVKFDFDKSVVKPNSYGDVKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSQRRADAV 274
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
K ++ + + +S G+ P+ N T+ GR N+R+E
Sbjct: 275 KQ-VLVKDGIAPNRVSSVGYGKSRPVADNATEAGRAINRRVE 315
>gi|89895779|ref|YP_519266.1| hypothetical protein DSY3033 [Desulfitobacterium hafniense Y51]
gi|89335227|dbj|BAE84822.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 275
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 65/174 (37%), Gaps = 13/174 (7%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGS-SLDKAEDEFQMQLQDTGIVVS----RIGDMITC 74
++ K + D + +++ + + D GI +
Sbjct: 80 TNKPQEGKEPEDGEGNGDGTGADMENMTIETIKQKLDKFAADNGIETKLVSSIEERGLVI 139
Query: 75 YIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
I + F S + K +L I +L P+ I ++ HTD++ N N +
Sbjct: 140 SIQDTLLFESGAAVITPKAREILDKINNVLASAPNY-IKVEGHTDNLPINTNRFPSNWEL 198
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S RA + I + + +S G+ P+ NDT+ GR N+R+++ I
Sbjct: 199 SVLRATNVVH--IMQEIIPAEQLSATGYGEYRPLAANDTEAGRARNRRVDLVIL 250
>gi|153870654|ref|ZP_02000009.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
gi|152072883|gb|EDN69994.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
Length = 187
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 9/181 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + L ++ + + L D + + D
Sbjct: 11 MKNITLITLLL------ASINLAYAETPLPFPTTADEIINALTPKPTYQRERKGFIRDDK 64
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTDSI 120
G+ R D + + ++ + P+L+ A L I I HTD+
Sbjct: 65 GVKAIRADDPKVGAL--ILFDFDSAVIKPESYPLLREFAKALQSGLVDAQIIIAGHTDNS 122
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT NL +S++R+ +K++LI ++ ++++ PI+ N+T+ GR N+R+E
Sbjct: 123 GTETYNLNLSEQRSQSVKAFLISAYGIADTRLTIKAHGESQPIEPNETESGRMKNRRVEF 182
Query: 181 Q 181
Sbjct: 183 I 183
>gi|331269325|ref|YP_004395817.1| chemotaxis motB protein [Clostridium botulinum BKT015925]
gi|329125875|gb|AEB75820.1| chemotaxis motB protein [Clostridium botulinum BKT015925]
Length = 242
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 73/195 (37%), Gaps = 12/195 (6%)
Query: 7 LSMFIMTTISGCGLAS------REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+S + + +SG S + + + K ++ D
Sbjct: 49 ISSSLQSVLSGSNSNSILDFNSNGEVPIVGPPQEMGPKSGGGNEAMYGKVKEFMDKNKLD 108
Query: 61 TGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V R I + ++ F S + ++ +L I+ +L P+ I I+ HTD+
Sbjct: 109 NTVQVKRDARGIIIELKDNILFDSAQAEIKAPSKEILDKISRLLESVPNG-IIIEGHTDN 167
Query: 120 IGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ ++N +S +RA + Y ++ + G+ +PI+ ND R N
Sbjct: 168 VPIHNTKYESNWELSTQRAVNVLKYFVESKGLAPDKFQAAGYGEFHPIEKNDNYADRAKN 227
Query: 176 QRIEIQIFPRGNIKK 190
+R+ I I KK
Sbjct: 228 RRVNILITASEKEKK 242
>gi|26987857|ref|NP_743282.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|148546400|ref|YP_001266502.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|24982560|gb|AAN66746.1|AE016303_1 OmpA family protein [Pseudomonas putida KT2440]
gi|148510458|gb|ABQ77318.1| OmpA/MotB domain protein [Pseudomonas putida F1]
gi|313497483|gb|ADR58849.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 230
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I L L IAT L + PS +++ HTDS+G+ N +S+ RA
Sbjct: 121 IRDVHFEFDSARLTASDKERLNTIATRLKQEAPSARLSVSGHTDSVGSDSYNQKLSERRA 180
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL++ GV + F+SV G P+ N T GR N+R EI+I
Sbjct: 181 HSVTDYLVESGVPRSSFVSVVGAGETQPVADNATAEGRAMNRRTEIKI 228
>gi|227538856|ref|ZP_03968905.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227241365|gb|EEI91380.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 230
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIAT 101
G +DK E + + G V + + I + F ++ L+ + +
Sbjct: 78 IGKKMDKQAAEIENTVA--GAEVIKSDEGIIVKFDEGILFDFNKSDLKASAKTNISKLVA 135
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
LNK P T I + HTD++G+L N +S+ RA +K+Y + +G++ R I+ G Y
Sbjct: 136 TLNKEPDTKILVIGHTDNVGSLAANQKVSEARAAAVKTYAVSQGLNGGR-INTEGKNYSE 194
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
P+ +NDT GR N+R+EI I +K+
Sbjct: 195 PLASNDTDAGRAENRRVEIVIVAGDKMKQ 223
>gi|219670208|ref|YP_002460643.1| OmpA/MotB domain protein [Desulfitobacterium hafniense DCB-2]
gi|219540468|gb|ACL22207.1| OmpA/MotB domain protein [Desulfitobacterium hafniense DCB-2]
Length = 275
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 13/174 (7%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGS-SLDKAEDEFQMQLQDTGIVVS----RIGDMITC 74
++ K + D + +++ + + D GI +
Sbjct: 80 TNKPQEGKAPEDGEGNGDGTGADMENMTIETIKQKLDKFAADNGIETKLVSSIEERGLVI 139
Query: 75 YIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
I + F S + K +L I +L P+ I ++ HTD++ N N +
Sbjct: 140 SIQDTLLFESGAAVITPKAREILDKINNVLASAPNY-IKVEGHTDNLPINTNRFPSNWEL 198
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S RA + I + + +S G+ P+ +NDT+ GR N+R+++ I
Sbjct: 199 SVLRATNVVH--IMQEIIPAEQLSATGYGEYRPLTSNDTEAGRARNRRVDLVIL 250
>gi|325923404|ref|ZP_08185069.1| peptidoglycan-associated lipoprotein [Xanthomonas gardneri ATCC
19865]
gi|325546119|gb|EGD17308.1| peptidoglycan-associated lipoprotein [Xanthomonas gardneri ATCC
19865]
Length = 172
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 72/188 (38%), Gaps = 19/188 (10%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L +S+ + ++GC +E + + + S L
Sbjct: 1 MNKSTRVLLVSLLSVAVLAGCSKKVKETPPAPTDTTTGSSVPTGPATSGL---------- 50
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + + L+ +F ++ A L PS+ I +Q +
Sbjct: 51 -----YGPGDLDTDACLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNA 105
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ + N+ + + R + + S L G S+++ ++V + + P+ T ++ N+R
Sbjct: 106 DERGSREYNMGLGERRGNAVSSSLQAAGGSASQ-LTVVSYGEERPVCTETSESCWSQNRR 164
Query: 178 IEIQIFPR 185
+EI +
Sbjct: 165 VEIVYTAQ 172
>gi|229588770|ref|YP_002870889.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
gi|229360636|emb|CAY47494.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
Length = 261
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 79/247 (31%), Gaps = 66/247 (26%)
Query: 1 MIKELGLSMFIMT--TISGCGLASREKKKVFLH----------KSNDTDIVNKRFGSSLD 48
M K+L + + ++ C + + + K LD
Sbjct: 1 MRKQLMIPALLAMSVALAACSTPPNANLENARTNFSALQTNPQATKLAALETKDASEWLD 60
Query: 49 KAEDEFQMQLQDTGIV-------------------------------------------- 64
KA+ ++ + + +
Sbjct: 61 KADKAYRDKEDEKKVDQLAYLTNQRVEVAKDTIVLRESEAKLKNAGDERARALLDARDAQ 120
Query: 65 ---------VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + ++ L+ L + +A L P + ++
Sbjct: 121 IKQLQDSLNAKQTDRGTLVTFGDVLFATNKSDLKSSGLVNITKLAQFLRDNPDRKVIVEG 180
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+TDS G+ N +S+ RA ++ L Q+GV +R ++ +G+ +YP+ N + GR N
Sbjct: 181 YTDSTGSDSYNQSLSERRAASVQRALAQQGVDISRIVT-QGYGKEYPVADNGSVSGRAMN 239
Query: 176 QRIEIQI 182
+R+E+ I
Sbjct: 240 RRVEVTI 246
>gi|167035288|ref|YP_001670519.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166861776|gb|ABZ00184.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 230
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I L L IAT L + PS +++ HTDS+G+ N +S+ RA
Sbjct: 121 IRDVHFEFDSARLTSSDKERLNTIATRLKQEAPSARLSVSGHTDSVGSDSYNQKLSERRA 180
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL++ GV F+SV G P+ N T GR N+R EI+I
Sbjct: 181 HSVTDYLVESGVPRRSFVSVVGAGETQPVADNATAEGRAMNRRTEIKI 228
>gi|119896707|ref|YP_931920.1| putative peptidoglycan-associated lipoprotein [Azoarcus sp. BH72]
gi|119669120|emb|CAL93033.1| putative peptidoglycan-associated lipoprotein [Azoarcus sp. BH72]
Length = 172
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 59/176 (33%), Gaps = 13/176 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L L + ++ C E V ++ +
Sbjct: 1 MKKLVLPALLSAVLAACSSTGPEATSGAAVTDRSGAGVATVTANTP-----------SGS 49
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
GI + I ++ P+++ L + P + +Q + D G
Sbjct: 50 GIAALTDPNNI-LSKRNVFFDFDSYVIKADAKPLVEAHGRFLAQNPQMKMLVQGNADERG 108
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ + NL + Q+RAD +K L+ G + SV + P T ++ N+R
Sbjct: 109 SREYNLALGQKRADAVKQALLLLGAKEAQIESVS-LGEEKPRCTESSEACFAQNRR 163
>gi|294139895|ref|YP_003555873.1| sodium-driven polar flagellar protein PomB [Shewanella violacea
DSS12]
gi|293326364|dbj|BAJ01095.1| sodium-driven polar flagellar protein PomB [Shewanella violacea
DSS12]
Length = 325
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 6/169 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
A E K +S + + K E ++ D I + +G I I
Sbjct: 143 SKAESESKAKAEEESKAQAAAQENINDQVKKMAMELNKEIVDGAIEIESLGQQIIIRIRE 202
Query: 79 HVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQER 133
+F S FL+ +F P+++ + +L P + + HTD + +N +S +R
Sbjct: 203 KGAFSSGSGFLQPRFKPVVRRVGELLRDIPGI-VTVSGHTDDMHISNELYSSNWDLSSKR 261
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A + LI+ + V G A P+ ND+ R N+R+EI I
Sbjct: 262 AVAVAHELIKVKGFEQNRMKVVGMANSAPLVDNDSASNRSRNRRVEIAI 310
>gi|157962805|ref|YP_001502839.1| flagellar motor protein MotB [Shewanella pealeana ATCC 700345]
gi|157847805|gb|ABV88304.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 322
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 7/169 (4%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+ + + + K E ++ D I + +G I I +F S
Sbjct: 148 QSDTQSTKTQASAQDKINEQVKKMAQELNKEIVDGAIEIESLGQQIIIRIREKGAFASGS 207
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYL 141
FL+ +F P+++ + +L P + + HTD +N +S +RA + L
Sbjct: 208 GFLQPRFKPVVRRVGELLKDVPGI-VTVSGHTDDWNISNELYSSNWDLSSKRAVAVGHEL 266
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
I+ + V G A P+ N++ R N+R+EI I +G K+
Sbjct: 267 IKVKGFEPNRMKVVGMASSDPLVENNSSANRARNRRVEIAI-EQGKAKE 314
>gi|325105502|ref|YP_004275156.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324974350|gb|ADY53334.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 442
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L P L +++ L S I + H + GT N+ +S +RA+
Sbjct: 337 DNIQFEFNSSVLRTSAYPTLDRVSSSLRADKSKSIQLDGHASAEGTEAYNMQLSIDRANS 396
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + I+V+G+ PI +N T+ GR N+R+E +
Sbjct: 397 V-KTYLVNSGVDAKRIAVKGYGESRPIASNATEEGRIKNRRVEFR 440
>gi|224417733|ref|ZP_03655739.1| CADF precursor [Helicobacter canadensis MIT 98-5491]
gi|253827077|ref|ZP_04869962.1| outer membrane protein OprF [Helicobacter canadensis MIT 98-5491]
gi|313141275|ref|ZP_07803468.1| cadf [Helicobacter canadensis MIT 98-5491]
gi|253510483|gb|EES89142.1| outer membrane protein OprF [Helicobacter canadensis MIT 98-5491]
gi|313130306|gb|EFR47923.1| cadf [Helicobacter canadensis MIT 98-5491]
Length = 306
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ + P +Q A +++ P I HTDS G+ N +S++RA +K+
Sbjct: 202 FPTDSAVVDPVYYPEIQDFAKYMDQNPDKTAVINGHTDSTGSAAYNQKLSEKRAQSVKNE 261
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++++ S+ + +G+ + PI +N T+ GRQ N+R+E ++
Sbjct: 262 IVKQ-GISSERLEAKGYGEEKPIASNKTREGRQKNRRVEAEV 302
>gi|78059690|ref|YP_366265.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77964240|gb|ABB05621.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 167
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 58/182 (31%), Gaps = 19/182 (10%)
Query: 2 IKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K L + + GC A++ + N + G+ +L
Sbjct: 1 MKSLTRYAVLLALVLFGGCHSATKTPSTAGMM--NQGTANGQAIGTP-----STMADELN 53
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ ++ ++ +LQ A L P I IQ +TD
Sbjct: 54 NP---------NSPLAKRSIYFDFDSYEVKPEYQSLLQAHADYLRLHPGRHILIQGNTDE 104
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + + R+ + ++ + I F + P+ + N+R +
Sbjct: 105 RGTSEYNLALGERRSQAVLR-TLETLGVPDAQIEAVSFGKEKPVALGHDEASWAQNRRAD 163
Query: 180 IQ 181
I
Sbjct: 164 IV 165
>gi|327405084|ref|YP_004345922.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320592|gb|AEA45084.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 681
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 2/145 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQ-DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
F S L E+ + + + + + V + I + + FL K +L+
Sbjct: 535 DGAAFDSKLITKEEIVKKENRVNNNLEVKELKVGEAYTINDILYDYNSDFLSTKSKFILR 594
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
A L P+ I +Q HTDS G NL +S RA +K+YL + + + +G+
Sbjct: 595 EFARFLKSNPTVKIMVQGHTDSDGDDAKNLDLSDRRAKGVKAYLQSQ-GIESDRLEAKGY 653
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
P NDT + N+R + I
Sbjct: 654 GETKPKVENDTPENKAKNRRTDFLI 678
>gi|255744684|ref|ZP_05418635.1| Flagellar motor rotation protein MotB [Vibrio cholera CIRS 101]
gi|262161183|ref|ZP_06030294.1| Flagellar motor rotation protein MotB [Vibrio cholerae INDRE 91/1]
gi|262168686|ref|ZP_06036381.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC27]
gi|255737715|gb|EET93109.1| Flagellar motor rotation protein MotB [Vibrio cholera CIRS 101]
gi|262022804|gb|EEY41510.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC27]
gi|262028933|gb|EEY47586.1| Flagellar motor rotation protein MotB [Vibrio cholerae INDRE 91/1]
Length = 294
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 6/173 (3%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
S + + ++++ + + + +++ I V +G I
Sbjct: 105 SAETSVQDNQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIR 164
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLIS 130
I +F FL+ KF P+++ IA ++ P + + HTD+ ++N +S
Sbjct: 165 IREKGAFPEGSAFLQPKFRPLVRQIAELVKDIPG-KVRVTGHTDNQKLDSELYRSNWDLS 223
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA + + + + + VRG A P+ NDT+ R N+R+EI I
Sbjct: 224 AQRAVSVAQEMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATNRRVEISIL 276
>gi|169825896|ref|YP_001696054.1| chemotaxis protein motB [Lysinibacillus sphaericus C3-41]
gi|168990384|gb|ACA37924.1| Chemotaxis protein motB (Motility protein B) [Lysinibacillus
sphaericus C3-41]
Length = 235
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 73/216 (33%), Gaps = 36/216 (16%)
Query: 5 LGLSMFIMTTISGCGLASREK----------------------KKVFLHKSNDTDIVNKR 42
L L + + + +EK V ++ +
Sbjct: 7 LTLLLAVFIILFASSSVDQEKLERMSAVFSQVFDGGTSFLEQPAPVPSPNADSDQTPQQN 66
Query: 43 FGSSLDKAE-DEFQMQLQ--------DTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKF 92
D+ E E + + + + + I + F + ++ ++
Sbjct: 67 SAYLKDQQELAEIKDSVDNFIAVNEMEGQFATEMTDEGLLVTIRDSILFDPGQATIKPEY 126
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIG---TLKNNLLISQERADVIKSYLIQ-RGVSS 148
+P+ + +A +L P I I HTD++ +NL +S RA L+
Sbjct: 127 IPIAKELADVLVSNPPRNIVITGHTDNVPAGPNFSSNLELSLMRASNFYMVLLDSNSQLK 186
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ S +G+ I NDT GR N+R+E+ I P
Sbjct: 187 SENFSAKGYGENRAIAPNDTAEGRAKNRRVEVLIQP 222
>gi|157736742|ref|YP_001489425.1| outer membrane fibronectin-binding protein [Arcobacter butzleri
RM4018]
gi|157698596|gb|ABV66756.1| outer membrane fibronectin-binding protein [Arcobacter butzleri
RM4018]
Length = 338
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 8/165 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + V + D +LD+ + + G V IG M + +
Sbjct: 181 APVAEKPAPVATPVAAPKDSDGDGVIDNLDECPNTMK------GAKVDNIGCMTLVNLNI 234
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + ++ + + A ++ P I++HTDS+GT N +S+ RA
Sbjct: 235 N-FDTDKSVIKDSYNSRINEFAKVMKADPKLKANIEAHTDSVGTDAYNQKLSERRATSAV 293
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ L+ I G+ PI +NDT GR N+R+E +
Sbjct: 294 NALVAA-GVEKDRIKAVGYGESRPIASNDTVEGRAENRRVEAVMV 337
>gi|149374667|ref|ZP_01892441.1| outer membrane protein; OmpA family [Marinobacter algicola DG893]
gi|149361370|gb|EDM49820.1| outer membrane protein; OmpA family [Marinobacter algicola DG893]
Length = 271
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+E+ + + ++ + ++ + E + +++LQ + + + + +
Sbjct: 102 QEQIDSAEARRKELELEMRADEAAQARREAK-ELRLQMEAMQAEQTDRGMVLTLGDVLFD 160
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ + L+ ++ +A + ++ + + ++ +TDS G N +S+ RA + LI
Sbjct: 161 LDKAELKSSGEATVRRLAEFMAEYENRRVRVEGYTDSTGEASYNQGLSERRAQAVSDTLI 220
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-PRGNIK 189
+ S + +GF ++P+ +NDT GRQ N+R+EI I GNI+
Sbjct: 221 E-MGISRTRVETKGFGEQFPVASNDTSGGRQQNRRVEIVISDEEGNIE 267
>gi|317491523|ref|ZP_07949959.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316921070|gb|EFV42393.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 564
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 52/108 (48%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L+ +L + P +I I HTD+ G + NL +SQ RA+ ++
Sbjct: 445 SLFDTNSAKLKSGSTKVLVTALVDIKAQPGWLIVIAGHTDATGNAQRNLALSQARAEAVR 504
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
++ G +V+G+ PI +N+T GR N+R++I++ P
Sbjct: 505 DWMRSMGDIPVTCFAVQGYGASQPIASNETDAGRAANRRVDIRLVPEA 552
>gi|310817592|ref|YP_003949950.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309390664|gb|ADO68123.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 640
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 13/171 (7%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V H N + + + V+ D I
Sbjct: 478 GCPAKDTDNDTVSDHLDNCPNEAGPASNQGCPAKQKQL----------VAIRQDRIDIK- 526
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERAD 135
+ ++++ +L +A +L + P I ++ HTD++G + NL +SQ+RA+
Sbjct: 527 ETVYFDSGKATIQRRSFKLLDQVAKLLREHPEIESITVEGHTDNVGKPEANLRLSQQRAE 586
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
++ YL ++ + + + +G+ + PI N T GR N+R++ R
Sbjct: 587 AVRDYLARK-GVAPQRLEAKGYGQERPIAPNTTSKGRATNRRVDFITTTRE 636
>gi|294673757|ref|YP_003574373.1| OmpA family protein [Prevotella ruminicola 23]
gi|294474249|gb|ADE83638.1| OmpA family protein [Prevotella ruminicola 23]
Length = 226
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 82/216 (37%), Gaps = 28/216 (12%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKK-----------------------VFLHKSNDTDI 38
+K + +++ ++GC +++ K
Sbjct: 4 MKSIAVALCASMVLAGCNMSNTAKGTMIGAGGGAALGAIIGKIAGNTAVGAAIGGAVGAG 63
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSF-VSEVFLEKKFLP 94
G +DKA+ E +++ + + + + F ++ L
Sbjct: 64 TGAIIGKKMDKAKKE-AEAVKNAQVETITDANGLEAVKVTFDSGILFATNKADLNASSKS 122
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
LQ AT+L + +AI HTD+ G+ N +S RA + +YL GV +++ SV
Sbjct: 123 SLQQFATVLKNNSACDVAIYGHTDNTGSDAINNPLSVNRAKSVSNYLKSLGVPASQIKSV 182
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
G P+ N T GR+ N+R+E+ ++ + K
Sbjct: 183 DGQGSTNPVADNSTAEGRKQNRRVEVYMYASEQMIK 218
>gi|115373816|ref|ZP_01461109.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca
DW4/3-1]
gi|115369215|gb|EAU68157.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca
DW4/3-1]
Length = 669
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 13/171 (7%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V H N + + + V+ D I
Sbjct: 507 GCPAKDTDNDTVSDHLDNCPNEAGPASNQGCPAKQKQL----------VAIRQDRIDIK- 555
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERAD 135
+ ++++ +L +A +L + P I ++ HTD++G + NL +SQ+RA+
Sbjct: 556 ETVYFDSGKATIQRRSFKLLDQVAKLLREHPEIESITVEGHTDNVGKPEANLRLSQQRAE 615
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
++ YL ++ + + + +G+ + PI N T GR N+R++ R
Sbjct: 616 AVRDYLARK-GVAPQRLEAKGYGQERPIAPNTTSKGRATNRRVDFITTTRE 665
>gi|28869499|ref|NP_792118.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213968086|ref|ZP_03396231.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato T1]
gi|301384938|ref|ZP_07233356.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato Max13]
gi|302061987|ref|ZP_07253528.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato K40]
gi|28852741|gb|AAO55813.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213927066|gb|EEB60616.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato T1]
gi|330875557|gb|EGH09706.1| outer membrane porin OprF [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
gi|330967341|gb|EGH67601.1| outer membrane porin OprF [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|331016208|gb|EGH96264.1| outer membrane porin OprF [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 344
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 68/173 (39%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + +D N ++DK D + V G +
Sbjct: 178 GGSKKVEAAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVR 231
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
++ ++ + ++ +A + ++P T ++ HTDS+G N +S+ RA
Sbjct: 232 VELDVKFDFNKSVVKPNSMGDIKNLADFMQQYPQTTTTVEGHTDSVGPDAYNQKLSERRA 291
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +K L+ + ++ G+ P+ N T GR N+R+E ++ +
Sbjct: 292 NAVKQVLVNQYGVGASRVNSVGYGESRPVADNATDAGRAVNRRVEAEVEAQAK 344
>gi|304405743|ref|ZP_07387401.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9]
gi|304344986|gb|EFM10822.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9]
Length = 278
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 64/154 (41%), Gaps = 9/154 (5%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRI----GDMITCYIPVHVSF-VSEVFLEKKFLPM 95
K+ L+K + + ++ G+ + I + + ++ + +
Sbjct: 112 KKEQEDLEKLKKQLDQYIKSMGLTTQLDTKLNQSQLLITISDNALYASGSSAVKPESRKL 171
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
Q IA +L ++P I + HTD+ ++N +S +RA L+ +
Sbjct: 172 GQAIAKMLKQYPGYEIIVAGHTDNQPISNSDFRDNWDLSSDRALNFMQILLASAQLDPKL 231
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
IS G+ P+ +N T+ GR N+R+E+ + +
Sbjct: 232 ISSTGYGEFRPLTSNATEAGRSKNRRVEVSLMRK 265
>gi|294672984|ref|YP_003573600.1| OmpA family protein [Prevotella ruminicola 23]
gi|294473810|gb|ADE83199.1| OmpA family protein [Prevotella ruminicola 23]
Length = 374
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + L+ + + +Q +A + K PS +Q HTD+ G+ K N +SQ+RA+
Sbjct: 269 NNILFETGKATLKPESMEEIQKVADYMKKNPSVRFEVQGHTDNQGSDKINDPLSQQRAEA 328
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + + G P+ N T GR N+R+E
Sbjct: 329 VVK-ALAQLGCDEFNLRAVGKGSHEPVADNKTDAGRAQNRRVEFI 372
>gi|126214998|emb|CAM35534.1| hypothetical protein [Pseudomonas fluorescens]
Length = 254
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
N D + + D + Q L + + ++ L+ L
Sbjct: 99 NAGDERARALLDARDAQIKQLQDSLNA-----KQTDRGTLVTFGDVLFATNKSDLKSSGL 153
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+ +A L P + ++ +TDS G+ N +S+ RA ++ L Q+GV +R ++
Sbjct: 154 VNITKLAQFLRDNPDRKVIVEGYTDSTGSDSYNQSLSERRAASVQRALAQQGVDISRIVT 213
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+G+ +YP+ N + GR N+R+E+ I
Sbjct: 214 -QGYGKEYPVADNGSVSGRAMNRRVEVTI 241
>gi|27366989|ref|NP_762516.1| outer membrane protein A [Vibrio vulnificus CMCP6]
gi|37676767|ref|NP_937163.1| outer membrane protein [Vibrio vulnificus YJ016]
gi|27358557|gb|AAO07506.1| Outer membrane protein A precursor [Vibrio vulnificus CMCP6]
gi|37201310|dbj|BAC97133.1| outer membrane protein [Vibrio vulnificus YJ016]
Length = 357
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L L +A +L K+P I HTDS G+ K N IS++RA
Sbjct: 240 NQELFATGSSKLSAGGKQALTPLAEVLIKYPDAEAEIVGHTDSTGSEKVNQRISEQRAQA 299
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL+++ + VRG PI +N T GR N+R+E+ I
Sbjct: 300 VADYLVEQ-GVKAEQLKVRGAGESQPIASNKTAEGRAQNRRVEVTI 344
>gi|319653376|ref|ZP_08007476.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
gi|317394860|gb|EFV75598.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
Length = 265
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 5/154 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPM 95
+ + + Q + S + + I +V F + ++ L M
Sbjct: 107 AADQEELAELQQRVNAFIENQNLADKLETSLTTEGLLVSIRDNVLFGSGSAEVREQDLNM 166
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRF 151
IA +L P I I HTD++ ++N +S RA +++ ++
Sbjct: 167 ASEIAELLIMDPPRNIIISGHTDNVPIRNSSFESNWELSVMRAVNFMKIILKNDQLDPKW 226
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
S +GF P+ N+TK GR N+R+EI I PR
Sbjct: 227 FSAKGFGEFQPVAGNNTKEGRAKNRRVEILILPR 260
>gi|302135199|ref|ZP_07261189.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato NCPPB
1108]
Length = 344
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + D N ++DK D + V G +
Sbjct: 178 GGSKKVEAAPAPVAEVCPDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVR 231
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
++ ++ + ++ +A + ++P T ++ HTDS+G N +S+ RA
Sbjct: 232 VELDVKFDFNKSVVKPNSMGDIKNLADFMQQYPQTTTTVEGHTDSVGPDAYNQKLSERRA 291
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +K L+ + ++ G+ P+ N T GR N+R+E ++ +
Sbjct: 292 NAVKQVLVNQYGVGASRVNSVGYGESRPVADNATDAGRAVNRRVEAEVEAQAK 344
>gi|315225528|ref|ZP_07867338.1| OmpA-OmpF porin family protein [Capnocytophaga ochracea F0287]
gi|314944472|gb|EFS96511.1| OmpA-OmpF porin family protein [Capnocytophaga ochracea F0287]
Length = 456
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V D+ + + +E Q +L D +
Sbjct: 304 GCPWPDTDGDGVLDKDDQCVDVPGPASNNGCPEVTEEVQKKLND--------------FA 349
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ V++ ++ + +L I +LN++ + +I+ +TD G N +S++RA
Sbjct: 350 RTILFDVNKATIKPQSATVLNQIVDVLNQYKNAKFSIEGYTDISGKRDKNQKLSEDRAYS 409
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+K+YLI++G+ R ++ +GF PI +N TK GR+ N+R+EI +
Sbjct: 410 VKAYLIEKGIDEGR-LTAKGFGPDKPIASNKTKKGRELNRRVEINLV 455
>gi|294782148|ref|ZP_06747474.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA]
gi|294480789|gb|EFG28564.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA]
Length = 396
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV-----SRIGDM 71
G G + + K + + G + + + + + + S +
Sbjct: 222 GSGTYTDKSKNLVIENDGKGKAKITFNGQTTEVDAKPLEKPGKLAKLEMVPPVPSIEANS 281
Query: 72 ITCYIPVHVSFV-SEVFLE--KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + V F + + + +L+ +A +L + I HTDS G+ + N +
Sbjct: 282 LLINLDSEVLFDVDKYDVRVHPEAEEVLKNLAIVLKEMDVKNFEIDGHTDSDGSDEYNQV 341
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S++RA+ +K++L+ +GV++ I+ +G+ P+ +NDT G+Q N+R+EI I
Sbjct: 342 LSEKRANSVKNFLVSQGVTAE--ITTKGYGESKPVASNDTAEGKQKNRRVEIII 393
>gi|256819872|ref|YP_003141151.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256581455|gb|ACU92590.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 360
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
R+ I Y + + ++ + +L IA I+N+ P ++ HTD+ GT ++
Sbjct: 240 KRVVKQINLYAKTILFDTDKSVVKPQAEFILDNIAIIMNENPDFNFVVEGHTDNTGTPEH 299
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
NL +SQ+RAD IK + R S + + +G+ PI++N+T+ G++ N+R+EI +
Sbjct: 300 NLKLSQDRADAIKQ-YLSRHGVSKKRLDAKGYGQTRPIESNETERGKEINRRVEINVV 356
>gi|149922900|ref|ZP_01911321.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149816217|gb|EDM75723.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 517
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 62/172 (36%), Gaps = 6/172 (3%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ-----MQLQDTGIVVSRIGDMITCY 75
A ++D LDK DE + V + T
Sbjct: 347 AETVNDYKDEDGCPESDRDGDGILDELDKCPDEPETANGYQDEDGCADEVPKEVAAFTGA 406
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I + K L +L FP I + HTDS G +N+ +S+ RA+
Sbjct: 407 IKGITFETDSDKIRKSSTRTLDKAVKVLTDFPDIRIKVTGHTDSRGDHDHNVDLSKRRAE 466
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ + I+ GF P+DTNDT+ GR NN+RIE +I R
Sbjct: 467 SV-KTYLVEHGIDASRITTDGFGPDKPVDTNDTRAGRANNRRIEFEIVQRAK 517
>gi|169796598|ref|YP_001714391.1| hypothetical protein ABAYE2575 [Acinetobacter baumannii AYE]
gi|215484059|ref|YP_002326284.1| OmpA family protein [Acinetobacter baumannii AB307-0294]
gi|301344741|ref|ZP_07225482.1| OmpA family protein [Acinetobacter baumannii AB056]
gi|301510762|ref|ZP_07235999.1| OmpA family protein [Acinetobacter baumannii AB058]
gi|301595171|ref|ZP_07240179.1| OmpA family protein [Acinetobacter baumannii AB059]
gi|332853538|ref|ZP_08434802.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332868403|ref|ZP_08438134.1| OmpA family protein [Acinetobacter baumannii 6013113]
gi|169149525|emb|CAM87414.1| conserved hypothetical protein; putative bacterial outer membrane
domain [Acinetobacter baumannii AYE]
gi|213987872|gb|ACJ58171.1| OmpA family protein [Acinetobacter baumannii AB307-0294]
gi|332728571|gb|EGJ59943.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332733402|gb|EGJ64585.1| OmpA family protein [Acinetobacter baumannii 6013113]
Length = 471
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 4/179 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ L + + + + + +SL ++ + +
Sbjct: 295 KITLKAGDAAALEALTAKVKALVPHTEVVAAAPETAEQSVSNSLSASQTALT-AIDPNNV 353
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V+ + + I + +L AT+LNK + + HTDS G
Sbjct: 354 DVNALVKALNLQIIN--FASGSSDIPADNKAILDQAATLLNKVTGVKLDVGGHTDSTGNA 411
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL+ +GV +++ + +G + P+ N T+ GR N+RIE +
Sbjct: 412 AANKALSQRRAQAVVDYLVSKGVDASKLV-AKGHGSEQPVADNTTEEGRFKNRRIEFSV 469
>gi|320158865|ref|YP_004191243.1| outer membrane protein A [Vibrio vulnificus MO6-24/O]
gi|319934177|gb|ADV89040.1| outer membrane protein A precursor [Vibrio vulnificus MO6-24/O]
Length = 357
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L L +A +L K+P I HTDS G+ K N IS++RA
Sbjct: 240 NQELFATGSSKLSAGGKQALTPLAEVLIKYPDAEAEIVGHTDSTGSEKVNQRISEQRAQA 299
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL+++ + V G PI +N T GR N+R+E+ I
Sbjct: 300 VADYLVEQ-GVKAEQLKVSGAGESQPIASNKTAEGRAQNRRVEVTI 344
>gi|163782256|ref|ZP_02177254.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159882289|gb|EDP75795.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 313
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 49/116 (42%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
I + + I ++ L+ IA L P + + HTD G+
Sbjct: 196 KSIEERGSVSIYGIHFDHGSAVIKPGSEKTLKEIARYLKMNPKARLYVVGHTDGTGSYDY 255
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL +S +RA+ + L++ S + + G P+DTN T GR N+R+E+
Sbjct: 256 NLKLSLKRAEAVVRRLVKEYGISPKRLKAVGVGPVAPVDTNRTPEGRARNRRVELV 311
>gi|238792655|ref|ZP_04636287.1| hypothetical protein yinte0001_22390 [Yersinia intermedia ATCC
29909]
gi|238728011|gb|EEQ19533.1| hypothetical protein yinte0001_22390 [Yersinia intermedia ATCC
29909]
Length = 575
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 55/109 (50%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L+ +L + P +I + HTD G K+N +S +RA+ ++
Sbjct: 443 SLFDVGQSMLKSGSTKVLINALVGIKAKPGWLIVVAGHTDITGDDKSNQALSLKRAESVR 502
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ G +V+G+ P+ +NDT+ GR N+R+EI + P+ +
Sbjct: 503 NWMRDTGDIPESCFAVQGYGQSRPLKSNDTEAGRALNRRVEISLVPQAD 551
>gi|254294114|ref|YP_003060137.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
gi|254042645|gb|ACT59440.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
Length = 487
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 67/176 (38%), Gaps = 11/176 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI--------- 72
S + FL +D AE + + G+ + + G+ +
Sbjct: 312 SSDSVYSFLTDDLGNIGEALGVQYDVDVAEADLGELDELNGLELRQNGNNLSDVCQDAFA 371
Query: 73 -TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + ++ L + + + + I ++ HTD++G + N+ +S
Sbjct: 372 LIMDANRIYFETGQATISRESGDTLDKLIAVARRCNNVAIRVEGHTDNVGGREANVRLSD 431
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+RA + YLI RG R +S G+ P N+T GR N+RIE + N
Sbjct: 432 KRAQAVADYLIGRGYPDYR-LSAIGYGSDKPAANNETPEGRARNRRIEFIVTSEEN 486
>gi|77457448|ref|YP_346953.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77381451|gb|ABA72964.1| putative OmpA family protein [Pseudomonas fluorescens Pf0-1]
Length = 240
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 2/126 (1%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + + ++IT +V F + L+ L + L I + H
Sbjct: 114 VTEKPAEPAPQTEVITLNDAGNVLFDFDKSDLKPAAKSQLDTLMDKLRNADVVSIKVIGH 173
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS G+ N +S+ RA + YL+ + + ++ G P+ N+T GR N+
Sbjct: 174 TDSKGSDAYNQALSERRASSVAEYLLSQ-GLAPNKLTSEGRGESEPVADNNTDEGRAQNR 232
Query: 177 RIEIQI 182
R+E+ I
Sbjct: 233 RVELHI 238
>gi|312959355|ref|ZP_07773872.1| OmpA family protein [Pseudomonas fluorescens WH6]
gi|311286072|gb|EFQ64636.1| OmpA family protein [Pseudomonas fluorescens WH6]
Length = 261
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 78/247 (31%), Gaps = 66/247 (26%)
Query: 1 MIKELGLSMFIMT--TISGCGLASREKKKVFLH----------KSNDTDIVNKRFGSSLD 48
M K+L + + ++ C + + + K LD
Sbjct: 1 MRKQLMIPALLAMSVALAACSTPPNANLENARTNFSALQANPNATKVAALETKDAQDWLD 60
Query: 49 KAEDEFQMQLQDTGIV-------------------------------------------- 64
KA+ ++ + +
Sbjct: 61 KADKAYRDKEDQKKVDQLAYLTNQRVEVAKDTIALRESEAKLKNAGDERARALLDARDAQ 120
Query: 65 ---------VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + ++ L+ L + +A L P + ++
Sbjct: 121 IKQLQDSLNAKQTDRGTLVTFGDVLFATNKSDLKSTGLVNITKLAQFLRDNPDRKVIVEG 180
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+TDS G+ N +S+ RA ++ L Q+GV +R ++ +G+ +YP+ N + GR N
Sbjct: 181 YTDSTGSDSYNQSLSERRAASVQRALAQQGVDISRIVT-QGYGKEYPVADNGSVSGRAMN 239
Query: 176 QRIEIQI 182
+R+E+ I
Sbjct: 240 RRVEVTI 246
>gi|330982864|gb|EGH80967.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 137
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + ++ L+ + +A L + P + ++ +TDS
Sbjct: 3 NSLNAKQTERGTLVTFGDVLFDYNKAELKPTAQGDIGKLAGFLQENPDRKVIVEGYTDST 62
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ N +S+ RA+ + + R I G+ +YP+ N + GR N+R+E+
Sbjct: 63 GSASYNQSLSERRANSV-RMALVRMGVDPARIVTMGYGKEYPVADNSSNSGRAMNRRVEV 121
Query: 181 QIF-------PRGNIK 189
I PR ++K
Sbjct: 122 TISNDNQPVAPRSSMK 137
>gi|260772262|ref|ZP_05881178.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
gi|260611401|gb|EEX36604.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
Length = 327
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ V L ++ L + LN++P + I HTD+ G N +S++RA
Sbjct: 212 RLDSSSFAFDSVSLNQESKQQLTKLVRFLNQYPQAKVVITGHTDATGPAAYNQTLSEKRA 271
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L+++G+ +R I+ RG PI +N T GR+ N+R++I I
Sbjct: 272 KAVADALVEQGIQRSR-ITWRGEGETNPIASNSTAEGRELNRRVDITI 318
>gi|302873043|ref|YP_003841676.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|307688801|ref|ZP_07631247.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|302575900|gb|ADL49912.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B]
Length = 256
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 65/170 (38%), Gaps = 7/170 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-DTGIVVSRIGDMITCYIPVH 79
+ K D + + + + + D+ + + + + + + +
Sbjct: 77 SQAVKDAASKSAELDYEKLEAEKLTKVKEQVDKLIAESELNGSATTAIEERGLVITVKDN 136
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQERA 134
+ F + +++++ L ++ IL+ + + ++ HTD+ +N +S RA
Sbjct: 137 LFFDSGKATVKEQYKRQLNALSKILSSIDNY-VRVEGHTDNVPIKTPYFNSNWQLSSIRA 195
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ + + G+ PI TN T+ GR N+R++I I
Sbjct: 196 SNVVEIFATECGLNPNRLLPVGYGEYRPIATNATEEGRAANRRVDIVILN 245
>gi|171463937|ref|YP_001798050.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193475|gb|ACB44436.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 188
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 2/184 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + + + T+S + + + N D +
Sbjct: 1 MNKTLRVLLASVITVSATAAIASDNWENSDGTLNWKDSSGTLCWRDSNWTPATAAKGCDG 60
Query: 61 TGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + + ++ L+ + L IA L K VI +TDS
Sbjct: 61 ALTSAASDVSQSKITLQADTLYDFNKSDLKPEGKATLDKIAADLKKIKLEVIITVGNTDS 120
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+GT N+ + Q RA +K+YL+ + V +R I P+ +N T GR N+R +
Sbjct: 121 VGTDAYNMALGQRRAQSVKTYLVSKDVDGSR-IYTESKGKSNPVASNATAEGRAKNRRTD 179
Query: 180 IQIF 183
I++
Sbjct: 180 IEVV 183
>gi|262373123|ref|ZP_06066402.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205]
gi|262313148|gb|EEY94233.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205]
Length = 188
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 7/181 (3%)
Query: 2 IKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSS-LDKAEDEFQMQLQ 59
IK L L T + +GC +K S +T +S L + L
Sbjct: 3 IKYLTLPFIAATLVFTGCAS----RKPAAEITSGNTPNGATTVNTSGLSEDAALNAQNLA 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V L + LQ A L ++ +A+ HTD
Sbjct: 59 GASSKGVTAANKAFLAKRVVHFDYDSSDLSNEDYQTLQAHAQFLVANANSRVALTGHTDE 118
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N+ + + RA ++S+LI + + + + + P++ + + N+R+E
Sbjct: 119 RGTREYNMALGERRAKAVESFLITN-GVNPQQLEAVSYGKEAPVNAGHNEAAWKENRRVE 177
Query: 180 I 180
I
Sbjct: 178 I 178
>gi|149913423|ref|ZP_01901956.1| OmpA domain protein [Roseobacter sp. AzwK-3b]
gi|149812543|gb|EDM72372.1| OmpA domain protein [Roseobacter sp. AzwK-3b]
Length = 638
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 8/159 (5%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+N + LD + + I + G I ++
Sbjct: 457 GEGSQFSINVTYREELDPIASIPTPEKCEAKIASVQSGRKIN-------FEPGSSTIDGN 509
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
++ IA IL + I I HTDS G + N +SQERA + + L R V ++
Sbjct: 510 GAAIMDDIAEILRECGDIRIEIGGHTDSQGREEMNERLSQERAQAVLNELRARRVLTSS- 568
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ +G+ PI NDT+ GR+ N+RIE ++ +++
Sbjct: 569 FTAKGYGESQPIADNDTEEGREANRRIEFRLLRPQPVEE 607
>gi|120437856|ref|YP_863542.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
gi|117580006|emb|CAL68475.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
Length = 320
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKF 92
+ V + ++ ++ L + G+ V + + + + F S + +
Sbjct: 151 ENVIAAKDAKMNALKNAVSNALTNFEGKGLSVEQRDGKVYVSMENKLLFDSGSWAVNSEG 210
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVS 147
+Q + T+L + P + I+ HTD++ G LK+N +S +RA I L +
Sbjct: 211 RKAVQQLGTVLGQNPDIAVLIEGHTDNVPYGGSGQLKDNWDLSTKRATAIVQILRENSNI 270
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ ++ G P+ +NDT+ G+ N+RIE+ + P+
Sbjct: 271 DPQSLTAAGRGEYAPVGSNDTEAGKAKNRRIEVILTPK 308
>gi|189475078|gb|ACE00213.1| OmpA [Vibrio alginolyticus]
Length = 320
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I ++ L+ + L + LN+ P + + +TD+ G NL +S++RA
Sbjct: 205 TIGTGSFDLNSTTLKPESAAKLDNLVAFLNEHPQANVEVVGYTDTSGPAAYNLKVSEKRA 264
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + L+++G+ S+R I RG PI +NDT+ GRQ N+R+E+ +
Sbjct: 265 ESVANALVEKGIDSSR-IQARGEGENNPIASNDTREGRQQNRRVEVVV 311
>gi|256820114|ref|YP_003141393.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256581697|gb|ACU92832.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 456
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 17 GCGLASREK--------KKVFLHKSNDT----DIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
GC + K V K N+ D D+ D +
Sbjct: 277 GCPDTDGDGVPDNVDQCKDVAGPKENNGCPWPDTDGDGVLDKDDECVDVPGPASNNGCPE 336
Query: 65 VSRI-GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V+ + + + V++ + + +L I +LN++ + +I+ +TD G
Sbjct: 337 VTEEVQKKLNDFARTILFDVNKATIRPQSATVLNQIVDVLNQYKNAKFSIEGYTDISGKR 396
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S+ RA +K+YLI++G+ R ++ +GF PI +N TK GR+ N+R+EI +
Sbjct: 397 DKNQKLSENRAYSVKAYLIEKGIDEGR-LTAKGFGPDKPIASNKTKKGRELNRRVEINLV 455
>gi|283786451|ref|YP_003366316.1| T6SS protein Cts1O [Citrobacter rodentium ICC168]
gi|282949905|emb|CBG89530.1| T6SS protein Cts1O [Citrobacter rodentium ICC168]
Length = 594
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 50/137 (36%), Gaps = 6/137 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ + + + + D + L L I ++ + P
Sbjct: 464 RQFSPLRKNVAADDASLFPLADTVPL------FANGSSNLMPDSEKTLLTIVPVIRRSPE 517
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I H+DS G+ N+ +S RA VIK +L+ G PI NDT
Sbjct: 518 KTFLIIGHSDSTGSAATNMALSAARAQVIKEWLVAHTGLPAGQFITEGAGDTRPIANNDT 577
Query: 169 KVGRQNNQRIEIQIFPR 185
K GR N+R+EI PR
Sbjct: 578 KEGRAQNRRVEIIPLPR 594
>gi|114778503|ref|ZP_01453347.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1]
gi|114551228|gb|EAU53787.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1]
Length = 325
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 57/153 (37%), Gaps = 6/153 (3%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG------DMITCYIPVHVSFVSEVFL 88
D+ +V G ++ + +Q + + + +
Sbjct: 171 DSSVVRAWAGRTMAELNVVEVEPMQQEMVFIKAKDLANGITQQGHIALHQIHFDTDSDII 230
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ P + IA +L P I + HTD+ G L+ N+ +SQ RA + + L
Sbjct: 231 KADSRPAIDQIALMLKNNPDLKIILVGHTDNQGDLQYNMDLSQRRAKAVMNSLESDYGIK 290
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ G Y PI +N + GR N+R+EI
Sbjct: 291 RARLGAAGIGYLAPIASNRSAEGRAENRRVEII 323
>gi|121594094|ref|YP_985990.1| TonB box domain-containing protein [Acidovorax sp. JS42]
gi|222111172|ref|YP_002553436.1| peptidoglycan-associated lipoprotein [Acidovorax ebreus TPSY]
gi|120606174|gb|ABM41914.1| TonB box domain protein [Acidovorax sp. JS42]
gi|221730616|gb|ACM33436.1| peptidoglycan-associated lipoprotein [Acidovorax ebreus TPSY]
Length = 180
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 65/179 (36%), Gaps = 7/179 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
K + L++ I+ ++GC + + + GS+ + L +
Sbjct: 6 FKRVSLALSIVALMAGCSSGVKLDDVPVEDRGATSTAPGANSGST--GQSGVAPVDLSQS 63
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G R V ++ +F +L+ A + + + ++ HTD G
Sbjct: 64 G----RDAAGPVGVARVIYFDFDSFIVKPEFQSVLEAHARFMKASSARKVVLEGHTDERG 119
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL + Q+RA+ ++ + + + F + P T+ N+R+E+
Sbjct: 120 GREYNLALGQKRAEAVRR-SLGLLGVQDAQVEAVSFGKEKPAVQGHTEDAHSQNRRVEL 177
>gi|89893041|ref|YP_516528.1| hypothetical protein DSY0295 [Desulfitobacterium hafniense Y51]
gi|89332489|dbj|BAE82084.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 264
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 62/171 (36%), Gaps = 9/171 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT----GIVVSRIGDMITCYIP 77
+ V + R + + + +++ + +M+ I
Sbjct: 80 GKNNDPVTTETDSLLAAARAREDRDMSDMKAKIDQYIKENNLSAQLETRITEEMLMISIR 139
Query: 78 VH-VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQE 132
+ + ++ + + +I+ IL ++P + + HTD++ N +S
Sbjct: 140 DYALFDSGSALVKTEAQKLAYIISDILRQYPGYNVEVAGHTDNLPINTAEFPTNWDLSSR 199
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R+ YL+Q G+ PI TN T+ GR N+R+E+ I
Sbjct: 200 RSLNFMKYLLQSDGLDQSRFRSIGYGEFQPIATNTTEEGRAKNRRVEVNIL 250
>gi|260557560|ref|ZP_05829775.1| OmpA/MotB [Acinetobacter baumannii ATCC 19606]
gi|260409186|gb|EEX02489.1| OmpA/MotB [Acinetobacter baumannii ATCC 19606]
Length = 471
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 4/179 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ L + + ++ + + +SL ++ + +
Sbjct: 295 KITLKAGDAAALEALTAKVKALVPHTEVVASAPETAEQSVSNSLSASQTALT-AIDPNNV 353
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V+ + + I + +L AT+LNK + + HTDS G
Sbjct: 354 DVNALVKALNLQIIN--FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDSTGNA 411
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL+ +GV +++ + +G + P+ N T+ GR N+RIE +
Sbjct: 412 AANKALSQRRAQAVVDYLVSKGVDASKLV-AKGHGSEQPVADNTTEEGRFKNRRIEFSV 469
>gi|146329067|ref|YP_001209253.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
gi|146232537|gb|ABQ13515.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
Length = 298
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 57/99 (57%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + F+++++ ++ +A L ++P+T + ++ HTDS + + N+ +SQ R + ++
Sbjct: 194 LFDNDKHFVKQQYYSEIETVAGYLRQYPNTTVTLEGHTDSNASEQYNINLSQRRVNAVRD 253
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
LIQ S IS G+ PI +N+T GRQ N+R+
Sbjct: 254 VLIQHYGISPARISAVGYGESQPIASNNTAAGRQQNRRV 292
>gi|192362185|ref|YP_001983947.1| OmpA domain-containing protein [Cellvibrio japonicus Ueda107]
gi|190688350|gb|ACE86028.1| OmpA domain protein [Cellvibrio japonicus Ueda107]
Length = 349
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 61 TGIVVSRIGDMITCYIP-----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+G+ V G + + ++ ++ ++LP ++ +A L ++ +TV+ ++
Sbjct: 213 SGLKVDADGCPVVLEKTLVINLEILFDTAKSEVKPQYLPQVKKLADALTQYENTVVTVEG 272
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTDS G+ N +SQ+RAD +K+ L+++ + ++ G+ + PI N T GR N
Sbjct: 273 HTDSQGSAAFNKRLSQQRADAVKAALVEKFGIAADRVTAVGYGLERPIANNATAEGRAQN 332
Query: 176 QRI 178
+R+
Sbjct: 333 RRV 335
>gi|91225860|ref|ZP_01260829.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|269965437|ref|ZP_06179556.1| outer membrane protein OmpA [Vibrio alginolyticus 40B]
gi|91189510|gb|EAS75786.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|269829916|gb|EEZ84146.1| outer membrane protein OmpA [Vibrio alginolyticus 40B]
Length = 320
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I ++ L+ + L + LN+ P + + +TD+ G NL +S++RA
Sbjct: 205 TIGTGSFDLNSTTLKPESAAKLDNLVAFLNEHPQANVEVVGYTDTSGPAAYNLKVSEKRA 264
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + L+++G+ S+R I RG PI +NDT+ GRQ N+R+E+ +
Sbjct: 265 ESVANALVEKGIDSSR-IQARGEGENNPIASNDTREGRQQNRRVEVVV 311
>gi|121608000|ref|YP_995807.1| OmpA domain-containing protein [Verminephrobacter eiseniae EF01-2]
gi|121552640|gb|ABM56789.1| OmpA domain protein [Verminephrobacter eiseniae EF01-2]
Length = 182
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 63/181 (34%), Gaps = 1/181 (0%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MIK + L++ I ++GC + + K+ T G + A
Sbjct: 1 MIKRISLALTIAALVAGCSSGVKLDEVPIEDKTASTLSGEANAGGNTGNAAQGSGGVAGV 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+R + ++ +F +++ + + + ++ HTD
Sbjct: 61 DLTQPARDTAGPVGIARIVYFDYDSYVIKPEFQTLIEAHSRFIKTDTKRKLMLEGHTDER 120
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + NL + Q+RA+ ++ + + + F + T+ N+R+E+
Sbjct: 121 GGREYNLSLGQKRAEAVRR-ALGLLGVPDSQMEAVSFGKEKLAVQGHTEEAHAQNRRVEM 179
Query: 181 Q 181
Sbjct: 180 T 180
>gi|77457447|ref|YP_346952.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77381450|gb|ABA72963.1| putative outer membrane protein A precursor [Pseudomonas
fluorescens Pf0-1]
Length = 231
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQ 131
T I + L +L +A+ L + + + + HTDS+G+ N +S
Sbjct: 119 TIVIRDVHFQFDKATLTPADKLVLDKVASRLKQESSTAQLTVTGHTDSVGSDAYNQKLSD 178
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + YL++ GV + F+SV G P+ N T GR N+R EI+I
Sbjct: 179 RRAHSVVKYLVESGVPQSSFVSVTGAGESQPVADNKTADGRALNRRTEIKI 229
>gi|311109539|ref|YP_003982392.1| type VI secretion system OmpA/MotB family protein [Achromobacter
xylosoxidans A8]
gi|310764228|gb|ADP19677.1| type VI secretion system OmpA/MotB family protein [Achromobacter
xylosoxidans A8]
Length = 425
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 7/144 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATIL 103
+ + +++D + V D + V + ++LP+L +A L
Sbjct: 272 APAPRLAVFLAPEIRDQLVSVRDEVDRSVVVLRGDGVFESGASSVRDQYLPVLSRVADAL 331
Query: 104 NKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ I ++ ++D+ +N +SQ RAD +K L QR + R + G
Sbjct: 332 RETQG-SILVRGYSDNTPMRSARFPSNWHLSQARADAVKDMLEQRLGQTAR-VRAEGRGD 389
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF 183
P+ NDT GR N+R+EI +
Sbjct: 390 ADPVAPNDTAAGRALNRRVEITVL 413
>gi|184159157|ref|YP_001847496.1| outer membrane protein [Acinetobacter baumannii ACICU]
gi|213158280|ref|YP_002320331.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
AB0057]
gi|215482606|ref|YP_002324798.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
AB307-0294]
gi|239501025|ref|ZP_04660335.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii AB900]
gi|301346652|ref|ZP_07227393.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
AB056]
gi|301513292|ref|ZP_07238529.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
AB058]
gi|301596453|ref|ZP_07241461.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
AB059]
gi|183210751|gb|ACC58149.1| Outer membrane protein [Acinetobacter baumannii ACICU]
gi|193078077|gb|ABO13012.2| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii ATCC 17978]
gi|213057440|gb|ACJ42342.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
AB0057]
gi|213988269|gb|ACJ58568.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
AB307-0294]
Length = 187
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 64/180 (35%), Gaps = 7/180 (3%)
Query: 2 IKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
IK L + ++GC +K + T + + L + L
Sbjct: 4 IKYLAFPLLSAALVMTGCAS-----RKPATTATTGTTNPSTVNTTGLSEDAALNAQNLAG 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V L + LQ A L ++ +A+ HTD
Sbjct: 59 ASSKGVTEANKAALAKRVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER 118
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA +++YLI + + + + + P++ + + N+R+EI
Sbjct: 119 GTREYNMALGERRAKAVQNYLIT-SGVNPQQLEAVSYGKEAPVNPGHDESAWKENRRVEI 177
>gi|197117628|ref|YP_002138055.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
gi|197086988|gb|ACH38259.1| OmpA family outer membrane protein, OprF domain-containing protein
[Geobacter bemidjiensis Bem]
Length = 434
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 55/102 (53%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ L+ ++ P L+ +A LN+FP+ I+ HTD++G N+ +SQ RAD I
Sbjct: 325 NIQFDTNKADLKPQYRPELKALADFLNEFPNATGVIEGHTDNVGPKALNMKLSQSRADTI 384
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
++ LI+ + I G+ P+ +N K G+ N+RIE
Sbjct: 385 RNSLIKEFGIAPERIKAVGYGPTKPVASNKDKAGKAKNRRIE 426
>gi|262274869|ref|ZP_06052680.1| outer membrane protein [Grimontia hollisae CIP 101886]
gi|262221432|gb|EEY72746.1| outer membrane protein [Grimontia hollisae CIP 101886]
Length = 197
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 64/183 (34%), Gaps = 13/183 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSND-TDIVNKRFGSSLDKAEDEFQMQLQD 60
+K+ L++ + ++GC + + ND D+ ++ +K + +
Sbjct: 1 MKKT-LAIVSILLLAGCSSQDIVTMQDTSPQVNDLRDLDYDGVINAREKCNETLR----- 54
Query: 61 TGIVVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
G V G + L L+ +A LN + I+
Sbjct: 55 -GAAVDNDGCPRDKTVKQSFRLNVAFANDSSALRPSNYAKLEQLADFLNDQRDAHVTIEG 113
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
H +G NL +SQ RA+ + LI + + G+ P+ D++ N
Sbjct: 114 HASKVGNPDYNLSLSQRRANAVARALINDFGIAPSRVDAIGYGDTEPLIDEDSEYAHDVN 173
Query: 176 QRI 178
+R+
Sbjct: 174 RRV 176
>gi|251794146|ref|YP_003008877.1| OmpA/MotB domain protein [Paenibacillus sp. JDR-2]
gi|247541772|gb|ACS98790.1| OmpA/MotB domain protein [Paenibacillus sp. JDR-2]
Length = 272
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 66/182 (36%), Gaps = 13/182 (7%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI----GDMITCYIP 77
+ K ++ + K+ L+K + + ++ G+ + I
Sbjct: 84 KKTSKDRHEDTESNLQELIKKEQEDLEKLKKQLDQYIKKNGLSSELETKLNQSQLMITIS 143
Query: 78 VHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN----LLISQE 132
+ F S L+ + + I+ +L + I + HTD N +S
Sbjct: 144 DNALFASGSDALKTESKELAANISKMLEPYTGYEIVVSGHTDDQPIRTQNFKSNWDLSSS 203
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR----GNI 188
RA L+Q S G+ P+ +NDT GR N+R+E+ I + GN
Sbjct: 204 RAIRFMDVLLQNSKLKPERFSAIGYGEYRPVASNDTTAGRAKNRRVEVSIIRKYVDSGNT 263
Query: 189 KK 190
++
Sbjct: 264 QQ 265
>gi|149185339|ref|ZP_01863656.1| outer membrane protein [Erythrobacter sp. SD-21]
gi|148831450|gb|EDL49884.1| outer membrane protein [Erythrobacter sp. SD-21]
Length = 210
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRI--GDMITCYIPVHVSF-VSEVFLEKKFLPMLQLI 99
G +D+ E + Q +GI VS G+ I +P V+F + F L +
Sbjct: 52 VGYRMDQQIKELEEQTAGSGIDVSETDGGNAILVNLPDGVTFATGSATINSAFRNTLDNV 111
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A L ++P+++I + +TD+ G+ N +S++RA + +YLI R S+ I +G+
Sbjct: 112 AANLVQYPNSLIDVYGYTDTTGSDSLNQRLSEQRAQAVANYLISR-GVSSSRIRWQGYGE 170
Query: 160 --KYPIDTNDTKVGRQNNQRIEIQIFP 184
++ V N+R+EI+I P
Sbjct: 171 QYEHLKVKTADGVNEPMNRRVEIKIIP 197
>gi|118589219|ref|ZP_01546625.1| hypothetical protein SIAM614_06738 [Stappia aggregata IAM 12614]
gi|118437919|gb|EAV44554.1| hypothetical protein SIAM614_06738 [Stappia aggregata IAM 12614]
Length = 360
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 76/189 (40%), Gaps = 15/189 (7%)
Query: 2 IKELGLSMFIMTTISGC-------GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
IK+L + ++ S + E + + ++ S+ + E
Sbjct: 179 IKKLEEAAGVVIVPSATVSFDFVFARKAAEPAQSVSTDAAPKVTASQSAASTALEPEGNL 238
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + D I L+ + P+L + I+ + P VI +
Sbjct: 239 DSEACTGRFEILSRTDNI-------YFPSGSSQLDPRSEPLLNSLVDIILRCPGLVIEVG 291
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTDS G+ +N L+S+ RA +K YL+ + + +R SV G+ P+ N + G++
Sbjct: 292 GHTDSDGSDTSNQLLSERRAGAVKQYLVSKSIPESRIKSV-GYGESRPVAANTSADGKRR 350
Query: 175 NQRIEIQIF 183
N+RIE +
Sbjct: 351 NRRIEFVVV 359
>gi|322507807|gb|ADX03261.1| OmpA/MotB [Acinetobacter baumannii 1656-2]
gi|323517407|gb|ADX91788.1| Outer membrane protein [Acinetobacter baumannii TCDC-AB0715]
Length = 397
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 4/179 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ L + + + + + +SL ++ + +
Sbjct: 221 KITLKAGDAAALEALTAKVKALVPHTEVVAAAPETAEQSVSNSLSASQTALT-AIDPNNV 279
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V+ + + I + +L AT+LNK + + HTDS G
Sbjct: 280 DVNALVKALNLQIIN--FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDSTGNA 337
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL+ +GV +++ + +G + P+ N T+ GR N+RIE +
Sbjct: 338 AANKALSQRRAQAVVDYLVSKGVDASKLV-AKGHGSEQPVADNTTEEGRFKNRRIEFSV 395
>gi|59713685|ref|YP_206460.1| outer membrane protein [Vibrio fischeri ES114]
gi|59481933|gb|AAW87572.1| outer membrane protein [Vibrio fischeri ES114]
Length = 208
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 27/207 (13%)
Query: 1 MIKELGLSMFIMTTISGCGLASR------------------EKKKVFLHKSNDTD----I 38
M++ L +F GC E + + +T
Sbjct: 1 MLR--LLPLFASLLFVGCAPQGSSLLDIAPKTKEDAPFPDFENPETAPVEEMETSEMTRA 58
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVS-EVFLEKKFLPML 96
+ G D + QL + GI ++G D + I V F S + L +L
Sbjct: 59 LTGPNGELKDDDMRQVAQQLTNMGIQYHKVGNDQLVISIQEKVHFSSAKAELTPLARSLL 118
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ ++ P + + HTD G N +S++R++ ++ YL+ +++++ S RG
Sbjct: 119 NKLIVVMASKPELALVLDGHTDVTGDPIKNQNLSEQRSNEVRRYLLANKLNASQLYS-RG 177
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIF 183
F P+ NDT +GR+ N+R+EI I
Sbjct: 178 FGEYLPLCDNDTILGRKCNRRVEITIL 204
>gi|262197986|ref|YP_003269195.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262081333|gb|ACY17302.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 1755
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 66/184 (35%), Gaps = 18/184 (9%)
Query: 17 GCGLASREKKKVFLHKSN--------------DTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
GC A + V D D LD DE
Sbjct: 1562 GCPDADNDGDGVLDQADGCMNEAGPIENRGCPDADRDGDTIVDRLDNCPDEAGPVENQGC 1621
Query: 63 I--VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDS 119
+ + +I D + + + + +L + +L P + I+ HTD
Sbjct: 1622 VKEQLVQITDNQIIILDRVYFETDKARIRSRSFALLNNVVQVLEAHPEIANVRIEGHTDD 1681
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ NL +S RA + S+LI+ GV R SV G+ P+ N ++ GR N+R+E
Sbjct: 1682 RGSDAYNLDLSDRRAASVVSFLIEAGVDPVRLQSV-GYGETRPVRENGSREGRAANRRVE 1740
Query: 180 IQIF 183
I
Sbjct: 1741 FHIV 1744
>gi|126641241|ref|YP_001084225.1| OmpA/MotB [Acinetobacter baumannii ATCC 17978]
Length = 397
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 4/179 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ L + + + + + +SL ++ + +
Sbjct: 221 KITLKAGDAAALEALTAKVKALVPHTEVVAAAPETAEQSVSNSLSASQTALT-AIDPNNV 279
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V+ + + I + +L AT+LNK + + HTDS G
Sbjct: 280 DVNALVKALNLQIIN--FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDSTGNA 337
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL+ +GV +++ + +G + P+ N T+ GR N+RIE +
Sbjct: 338 AANKALSQRRAQAVVDYLVSKGVDASKLV-AKGHGSEQPVADNTTEEGRFKNRRIEFSV 395
>gi|256823021|ref|YP_003146984.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069]
gi|256796560|gb|ACV27216.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069]
Length = 330
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQ---LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
++ ++R + +D E++ Q + + I + ++ ++ +
Sbjct: 180 SEDTSERVFAQVDVVEEKAQESKVVMVKASEMAQEIDLNGKVALYGLYFDTNKASIKAES 239
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
P L IA +L P + + H+D+ G N+ +S+ RA+ +K L+ + +
Sbjct: 240 KPTLDEIAKLLKDNPDLKLLVVGHSDNQGDFDYNIDLSKRRAESVKQALVSDYGVNAARL 299
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G Y P+ +N + GR N+R+E+
Sbjct: 300 KPWGVGYAAPVASNKAEQGRAKNRRVELV 328
>gi|323341391|ref|ZP_08081635.1| flagellar motor protein B [Lactobacillus ruminis ATCC 25644]
gi|323091268|gb|EFZ33896.1| flagellar motor protein B [Lactobacillus ruminis ATCC 25644]
Length = 267
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 10/177 (5%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDM 71
S + + S + L + ++ + +Q+TG VS D
Sbjct: 86 SASTKKQAAASEQHVQNSLSKQQARVQERQQLKEVAEKLKQDIQNTGRAGNTTVSYESDG 145
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG-----TLKN 125
+ + + F L ML + L + S + + +TD++ +
Sbjct: 146 VHLNLDSSILFNSGSADLSDAVKQMLDKLVPDLKQVSSNPVIVAGYTDNVPVSKRSNYAS 205
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S RA + Y + +G S +SV+ +A P +NDT G+ N+R+EI I
Sbjct: 206 NWELSSARAVTVMRYFVSKGAISESNVSVQAYAENKPKASNDTDEGKAQNRRVEIII 262
>gi|218778089|ref|YP_002429407.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218759473|gb|ACL01939.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 377
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G V+++G I + ++K++ ++ I IL P + ++ HTD+
Sbjct: 258 KGADVNKVGCWIIKDLE---FDFDSYEIKKEYQSCIKKIVAILRANPGLKLIVEGHTDNK 314
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ N +S RAD + ++ + +S +G+ + P+ +NDT+ GR N+R+++
Sbjct: 315 GSKAYNDKLSLNRADAVIDSMVGK-GIMPERLSAKGYGFSKPVASNDTEEGRARNRRVQL 373
Query: 181 Q 181
Sbjct: 374 T 374
>gi|296128006|ref|YP_003635256.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
gi|296019821|gb|ADG73057.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
Length = 560
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 6/165 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ + ++ + D D V + L+ E D + + + + V
Sbjct: 216 TPDVEETAPPEELDLDAVVEAPVFPLESTTAEL-----DGAVQTIESTEKVEVTLGSDVL 270
Query: 82 F-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F L + + L+A L + + + + HTD NL +S+ RA +
Sbjct: 271 FAFDSADLTPESADAVALVAQRLAEREAGSVEVVGHTDDQADDTYNLDLSRRRAQAVADA 330
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L + S + V G P+ ND++ R N+R+ + + +
Sbjct: 331 LEAQVAGSGHRMRVAGRGESEPVVPNDSEENRALNRRVTVSLTSK 375
>gi|320352974|ref|YP_004194313.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320121476|gb|ADW17022.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
Length = 359
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + F+ + L + +L P + + DS+G+ N+ +SQ RA+
Sbjct: 249 FNNILFDFDKAFIRPEHHAQLDQLGRLLVANPHVYVVLSGFCDSLGSEAYNIRLSQRRAE 308
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ YL ++ I + + Y P+ +N T+ GRQ N+R+ I +
Sbjct: 309 SVRRYLQKKFTIKKDRILLYWYGYANPVASNATEEGRQLNRRVTIVL 355
>gi|322418107|ref|YP_004197330.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18]
gi|320124494|gb|ADW12054.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18]
Length = 196
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 59/196 (30%), Gaps = 14/196 (7%)
Query: 1 MIKELG--LSMFIMTTI--SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQ 55
M K + L + + + GC + + + + +
Sbjct: 1 MRKNITGCLVVLCLGALIAGGCAKKDMVRTEEQAPAVTAPSTETAKPAREAKPEQKAPVT 60
Query: 56 MQLQDTGIVVSRI--------GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
Q VV++ + + L ++ L A L+K
Sbjct: 61 EQTPVREPVVAQDLRETTKAPATDLQSQLQKVYFNFDSSDLSEESRNTLSRNAEYLSKQG 120
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
S + I+ + D G+ N+ + + RA K + ++ IS + + P D
Sbjct: 121 SLKVLIEGNCDERGSDDYNMALGERRAKAAKD-YLVNLGIASERISTISYGEEKPADPGH 179
Query: 168 TKVGRQNNQRIEIQIF 183
+ N+R E +
Sbjct: 180 DEAAWAKNRRAEFVVV 195
>gi|254973922|ref|ZP_05270394.1| chemotaxis protein [Clostridium difficile QCD-66c26]
gi|255091309|ref|ZP_05320787.1| chemotaxis protein [Clostridium difficile CIP 107932]
gi|255312966|ref|ZP_05354549.1| chemotaxis protein [Clostridium difficile QCD-76w55]
gi|255515725|ref|ZP_05383401.1| chemotaxis protein [Clostridium difficile QCD-97b34]
gi|255648819|ref|ZP_05395721.1| chemotaxis protein [Clostridium difficile QCD-37x79]
gi|260682038|ref|YP_003213323.1| chemotaxis protein [Clostridium difficile CD196]
gi|260685636|ref|YP_003216769.1| chemotaxis protein [Clostridium difficile R20291]
gi|306518934|ref|ZP_07405281.1| chemotaxis protein [Clostridium difficile QCD-32g58]
gi|260208201|emb|CBA60548.1| chemotaxis protein [Clostridium difficile CD196]
gi|260211652|emb|CBE01912.1| chemotaxis protein [Clostridium difficile R20291]
Length = 231
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 65/178 (36%), Gaps = 13/178 (7%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
I +G + + + L ND + + +D+ + V
Sbjct: 60 ISMFSTGSSTSEKSPIESVLVDKNDKSNLEQD-------LKDKVNNSNLQNSVTVKDDSR 112
Query: 71 MITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKN 125
I + + F S L+ L + ++ + I I+ HTD++ T ++
Sbjct: 113 GILLELDDSILFDSGISELKADSKATLNKVYDMIKMMKN-KIVIEGHTDNVPVKSSTHES 171
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S RA + Y ++ R S G P+ +N+T GR N+R+ I I
Sbjct: 172 NWDLSSSRAVSVVRYFVEEKGMDPRLFSATGCGEYQPLVSNETAKGRAENRRVNILIT 229
>gi|94969959|ref|YP_592007.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
versatilis Ellin345]
gi|94552009|gb|ABF41933.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
versatilis Ellin345]
Length = 263
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 65/171 (38%), Gaps = 6/171 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ L + + + + + + +L + + + D + +
Sbjct: 85 SSSLADRSHETLDIGSQRRVTAAQVQTLRGELQAAIPEELTRSDVTLRTTSDGLVISLQE 144
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQER 133
F L + IA+IL + + ++ HTD + +N +S R
Sbjct: 145 IGFFDSGSAKLRPSSISAFGRIASILRE-KQCTVRVEGHTDPMPIHTAQYASNWELSTAR 203
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
A I LIQ + +S G+A +P+ NDT GR N+R+++ I
Sbjct: 204 ATGIVKRLIQEYGINPGDLSAGGYAEFHPVGPNDTAEGRAQNRRVDLVILS 254
>gi|148652893|ref|YP_001279986.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148571977|gb|ABQ94036.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1]
Length = 314
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + + L +A +NK+PST+ I+ HTD + NL +SQ RAD +
Sbjct: 207 EVLFETDKSVVRPSYYRKLSEVADFMNKYPSTIATIEGHTDDRASDSYNLALSQRRADAV 266
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
++ I + + G+ P TNDT GRQ N+R+
Sbjct: 267 RNVFIHEFDIDSNRLKAIGYGESKPRATNDTAEGRQLNRRV 307
>gi|74318472|ref|YP_316212.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
gi|74057967|gb|AAZ98407.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
Length = 402
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 8/167 (4%)
Query: 16 SGCGLA-SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+GC + K G A + + R
Sbjct: 241 AGCPSDRDGDGVPDARDKCPAEAGRGSADGCPPRAAREAEPEPEPPRPSMPRR------M 294
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ V L + +L A LN + + + HTDS + NL +SQ RA
Sbjct: 295 TLDGVSFEPGSVRLTPDSITILDNAAASLNAWGEVRVEVAGHTDSTHSAAFNLELSQRRA 354
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + + ++ RG+ P+ N T GR N+R+E+
Sbjct: 355 EAV-RAYLVKKGVRAERLTARGYGESQPVADNRTAAGRAQNRRVELV 400
>gi|159025752|emb|CAO02050.1| outer membrane protein A [Bordetella trematum]
Length = 165
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + +L +A I HTDSIGT N+ +S RAD +
Sbjct: 56 DTFFDFDKATLKPEGRQLLDQVAQQAKAINLETIIAVGHTDSIGTEAYNMKLSVRRADAV 115
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + I G PI +N T GR N+R+EI+I
Sbjct: 116 KAYLVGQ-GIDPNRIYTEGKGEAQPIASNKTAEGRARNRRVEIEIV 160
>gi|222054197|ref|YP_002536559.1| peptidoglycan-associated lipoprotein [Geobacter sp. FRC-32]
gi|221563486|gb|ACM19458.1| peptidoglycan-associated lipoprotein [Geobacter sp. FRC-32]
Length = 194
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 58/187 (31%), Gaps = 9/187 (4%)
Query: 5 LGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L +F + GC K + T+ + +E + +Q+
Sbjct: 8 LVTVLFCGALLCGGCAKKEMVKAEEATVPPVTTEKPAVTPPAKPAPSETVKEQPIQEAPT 67
Query: 64 V-----VSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
V + + + L L A L K + I+ H
Sbjct: 68 TTAESTVKEQAPTVIAATELEKVLFDFDSFVLSPAARDTLSKNAQWLEKNKQVKVQIEGH 127
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
D G+ + NL + ++RA +YL+ +SV F + P D + N+
Sbjct: 128 CDERGSDEYNLALGEKRAKSAVNYLVTL-GIPASQLSVISFGKEKPADPGHDEAAWAQNR 186
Query: 177 RIEIQIF 183
R E I
Sbjct: 187 RAEFVIL 193
>gi|91201036|emb|CAJ74094.1| hypothetical protein kuste3333 [Candidatus Kuenenia
stuttgartiensis]
Length = 395
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 2 IKELGLSMFIMTTISG-----CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+++L S +++ G + KKVFL D D+ D +
Sbjct: 218 LRKLARSATCGFSVTADEIASSGNMANFVKKVFLTDIPKQDSDGDGVYDEDDECPDTPE- 276
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G +V G + + ++++F L I +L K P I I+ H
Sbjct: 277 -----GAIVDSRGCWVV---KGIAFEYKKWDIKEEFESNLTNIVDVLEKNPDLQIRIEGH 328
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD+IG++K N+ +SQ+RA +K YL+++ IS GF +K+PI N T+ GR N+
Sbjct: 329 TDNIGSMKYNIDLSQKRALAVKDYLVEK-GIHESRISTTGFGFKHPIAPNVTEEGRALNR 387
Query: 177 RIEIQ 181
R EI
Sbjct: 388 RAEIV 392
>gi|330447358|ref|ZP_08311007.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328491549|dbj|GAA05504.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 200
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 68/178 (38%), Gaps = 2/178 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+IK ++ + + GC + + A+ ++ +
Sbjct: 4 VIKCSLVAAALGFVLVGCSNDIVSMDNNHQVNDLRDLDHDGVIEAREQCAKSAVGAEVDN 63
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G + I +E ++ + +A + ++P++ + I+ HT +
Sbjct: 64 NGCS--SQSEYIVRRDLHINFANDSAVVEPQYQGQIAKLADFMKQYPASKVTIEGHTSKV 121
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G N+++SQ RA+ + + L + S I G+ Y + +DT T+ Q N+RI
Sbjct: 122 GRYDYNMVLSQRRAENVATDLEHQFGISANRIKAIGYGYTHLLDTGMTEEANQKNRRI 179
>gi|322421651|ref|YP_004200874.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320128038|gb|ADW15598.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 254
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 56/145 (38%), Gaps = 6/145 (4%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPS 108
E + + +S + + F L++ +L + T L + +
Sbjct: 108 IEAYLMKMGAQSKVSISVTQRGLVVSLKEAGFFDSGSATLKQSSFSLLNDVVTSLASYSN 167
Query: 109 TVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ ++ HTD+I +N +S RA + YL ++ IS G+ P+
Sbjct: 168 -SVRVEGHTDNIPISSASFPSNWELSTARATNVLQYLTKQEDFDPARISAAGYGEYRPVA 226
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNIK 189
N + GR N+R++I + + +
Sbjct: 227 DNGDEEGRGKNRRVDIVLLSEQSER 251
>gi|255530239|ref|YP_003090611.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255343223|gb|ACU02549.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 280
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 44 GSSLDKAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFVSEVFL-EKKFLPMLQLI 99
+ +K +++ Q L +G+ V + + + F S + ++K L +
Sbjct: 120 DEATNKLKEKLQQALLGFTQSGLTVEIKNGKVYVSLTDKLLFPSGSIIIDEKGKQALTQL 179
Query: 100 ATILNKFPSTVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
A +L + P IA++ HTDS G +K+N +S R+ + +L + ++
Sbjct: 180 ADVLKQQPEINIAVEGHTDSQKITNLGQIKDNWDLSVLRSTSVVRFLTEICKVQPVRMTA 239
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+ N + R N+RIEI + P+
Sbjct: 240 TGKGEFQPLGPNTSAESRSKNRRIEIVLSPK 270
>gi|262193395|ref|YP_003264604.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262076742|gb|ACY12711.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 458
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--- 80
E + F + D+ N G+ E + + + D + + ++
Sbjct: 272 EDFEGFEDEDGCPDVDNDGDGNPDSADECPNRAETDNGFEDEDGCPDEVPTRVAEYIGVL 331
Query: 81 ----SFVSEVFLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + +L +A L ++PS + I HTD G + N+ +S+ERAD
Sbjct: 332 EGIRFPSGSAKIRDRRSRRILGDVAATLAEYPSVRVRISGHTDDRGRAEKNVQLSRERAD 391
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+K +L+ +G+ R ++ G+ + P+ N T+ GR N+RIE ++
Sbjct: 392 AVKWFLVDKGIEHTRIVTA-GYGPERPLADNGTRAGRAKNRRIEFELL 438
>gi|149377921|ref|ZP_01895649.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
gi|149357811|gb|EDM46305.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
Length = 402
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 62/166 (37%), Gaps = 17/166 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC L S V + G+ + +
Sbjct: 250 GCELDSDNDGVVNSADQCPGTTAGADV------------DAMGCEGVTETVETIELNVQF 297
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
P + + F ++ +A + ++P T + I H+DSIG + N +SQ RA+
Sbjct: 298 PT-----NSSVIGNAFDNEIRRVANFMLEYPETNVEIAGHSDSIGEAEYNRFLSQRRAEA 352
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + L S ++ G+ P+ +NDT GR N+R+E +I
Sbjct: 353 VATRLTDALGISEDRVNAVGYGESEPVASNDTAAGRAENRRVEARI 398
>gi|73539085|ref|YP_299452.1| OmpA/MotB [Ralstonia eutropha JMP134]
gi|72122422|gb|AAZ64608.1| OmpA/MotB [Ralstonia eutropha JMP134]
Length = 575
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 48/106 (45%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L +L ++ P + + HTD++G ++NL +S+ RA ++
Sbjct: 446 SLFKSGSAVLNPGSNRVLIGALELIKAHPDKRVLVAGHTDAVGAAQSNLKLSEARAASVR 505
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+L +++G+ P NDT+ GR N+R+EI + P
Sbjct: 506 DWLADAAGLPVTRFAIQGYGDTRPKAPNDTEAGRSANRRVEITLVP 551
>gi|326795240|ref|YP_004313060.1| peptidoglycan-associated lipoprotein [Marinomonas mediterranea
MMB-1]
gi|326546004|gb|ADZ91224.1| peptidoglycan-associated lipoprotein [Marinomonas mediterranea
MMB-1]
Length = 200
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 70/192 (36%), Gaps = 15/192 (7%)
Query: 4 ELGLSMFIMTTISGCGLASREKK--------------KVFLHKSNDTDIVNKRFGSSLDK 49
+ + I+GC + E + + ++ FG+ D
Sbjct: 8 KFAVIGLSAAWIAGCSTNATETDSSSTVAEDSASATEEQSADAAGQEAGSDQSFGAGEDG 67
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ + + V + D++ V + + + L A L P
Sbjct: 68 SITSVVVDDSGSASAVDQDVDLLAGVETVFYFDFDKSIVRPEAREALAKHAEFLVANPDA 127
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ ++ H D GT + N+ + + RA + YL +GV++++ SV F + P+
Sbjct: 128 RVVLEGHADERGTREYNMALGERRAKAVARYLTIQGVAASQIESVS-FGEEVPVAFGHDD 186
Query: 170 VGRQNNQRIEIQ 181
Q N+R+E++
Sbjct: 187 ASWQLNRRVEVR 198
>gi|225871803|ref|YP_002753257.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196]
gi|225791684|gb|ACO31774.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196]
Length = 262
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 66/168 (39%), Gaps = 6/168 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ ++ + ++ + + Q+ + + D + +
Sbjct: 67 GKGPVPEANPPADTALQTQENLEKMREQLQKKLAAQIAAHQVALQLGPDGLVISLREAGF 126
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADV 136
+ + + + +IA L + P + I+ HTD++ +N +S RA
Sbjct: 127 YDSGSATPKPSSMGAVGIIAHELYQVP-YALRIEGHTDNVPIHTAKFDSNWELSTARATT 185
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ LI+ + + +S G+A +PI +N T GR N+R++I + P
Sbjct: 186 MARLLIENFGVAPQRLSAAGYAQYHPIASNATAAGRAENRRVDIIVLP 233
>gi|240145494|ref|ZP_04744095.1| putative chemotaxis protein MotB [Roseburia intestinalis L1-82]
gi|257202309|gb|EEV00594.1| putative chemotaxis protein MotB [Roseburia intestinalis L1-82]
Length = 267
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 5/169 (2%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+E + + + ++ ED + V + +
Sbjct: 90 SETDQETDEENDVVEEYKEQALEESEKMSEQLEDAIARYGIQDQVEVDFNAQYVMLNMNG 149
Query: 79 HVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQER 133
+ F S + + P++ + ++ + +I ++ HTD++ ++N ++S R
Sbjct: 150 ALLFDSGHAEIRSEAYPLIDKLGKLIEPYQDNIIEVEGHTDNVPIHSAKYEDNDVLSFYR 209
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A + YL + G P+ N T+ GR N+R+ I+I
Sbjct: 210 ARAVTDYLRDITTVEPAHLKASGRGEYVPVADNTTQEGRSRNRRVIIKI 258
>gi|183984604|ref|YP_001852895.1| outer membrane protein a OmpA [Mycobacterium marinum M]
gi|183177930|gb|ACC43040.1| outer membrane protein a OmpA [Mycobacterium marinum M]
Length = 332
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 61/172 (35%), Gaps = 3/172 (1%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL--QDTGIVVSRIGD 70
T++G + +K V ++ VN + TG
Sbjct: 161 ITLTGTAASPDQKDAVGSAATSVWSDVNVENQIEVKGQPAGSTPPTGPAATGACADLQAA 220
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ V L +L + L P + + +TD+ G+ N+ +S
Sbjct: 221 VTALTGGAIAFGNDGVSLTPDSNKVLTQVVDKLRACPDAKVTVNGYTDNSGSEGLNIPLS 280
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+RA + +L+ I+ +G PI +NDT GR N+R+EI +
Sbjct: 281 AQRAQTVADFLVA-HGVPTDHITAKGLGSANPIASNDTAEGRIKNRRVEIVV 331
>gi|149919600|ref|ZP_01908079.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149819543|gb|EDM78971.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 458
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ---LQDTGI--VVSRIGDM 71
C + D N + + D+ +E + + L D G V
Sbjct: 277 ACPEVPGDP-PSGCPTVCIPDDDNDKVPNPQDQCPNEPEDRNGFLDDDGCPDEVPEELTS 335
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
++ + + + K +P L+ A +LN+FP + I HTDS G ++N+ +S+
Sbjct: 336 LSGIMQGVNFETDKDTITKDSIPQLEQAAEVLNRFPDLRVEISGHTDSRGGYQHNMDLSR 395
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
RA+ +K +L+ GV +R + RG PIDTNDT GR NN+RIE I G +
Sbjct: 396 RRAEAVKKWLVDNGVDGSR-LETRGAGPDEPIDTNDTSAGRFNNRRIEFTILGGGPV 451
>gi|197116453|ref|YP_002136880.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
gi|197085813|gb|ACH37084.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
Length = 333
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 52/102 (50%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ ++ ++ L+ +A L +FP+ I+ HTDS+G N+ +SQ RAD +
Sbjct: 226 NVHFDTNKSDIKPQYHDELKALADFLKEFPNATGTIEGHTDSVGDKAANMKLSQRRADSV 285
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ YL+ + + + G+ P N T G+Q N+RIE
Sbjct: 286 RKYLVDKFGIAPERVKAVGYGPTKPAADNKTAAGKQKNRRIE 327
>gi|240172204|ref|ZP_04750863.1| outer membrane protein a OmpA [Mycobacterium kansasii ATCC 12478]
Length = 332
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 57/174 (32%), Gaps = 5/174 (2%)
Query: 13 TTISGCGLASREKK--KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
T+SG + +K + S +
Sbjct: 159 VTLSGTAASPDQKDAVERAAKTSWPGVKIVNNIEVKGPAPTPGASPPPGSGAAGPCADLP 218
Query: 71 MIT--CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ V L +L +A L P + + ++D+ G N
Sbjct: 219 AVINALTGGAIAFKNDGVSLTPADNQILSQVAAKLKACPDARVTVNGYSDNGGGEGINFP 278
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S +RA + +L + + I+ RG+ PI +NDT GR N+R+EI +
Sbjct: 279 LSVQRATTVADFLAAQ-GVARDHITARGYGSANPIASNDTPEGRAKNRRVEIVV 331
>gi|126662605|ref|ZP_01733604.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
gi|126625984|gb|EAZ96673.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
Length = 467
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+GC + V + + + D+ +L D G +
Sbjct: 314 AGCPWPDTDGDGVADKDDKCPTVAGTVANNGCPEVSDDTMKKLNDYGKTI---------- 363
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + +K+ +P+LQ + IL ++P+ +++ HTDS G N +S+ERA
Sbjct: 364 ----LFNSGKASFQKQTIPVLQAMTAILKEYPTAKFSLEGHTDSTGADALNQKLSEERAA 419
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+K++L++ G+ ++R +S +GF P+D+N T G+ NN+R+E+++
Sbjct: 420 AVKNFLVENGIDASR-LSSKGFGESMPVDSNKTAKGKANNRRVEVKLV 466
>gi|332141875|ref|YP_004427613.1| flagellar motor protein MotB [Alteromonas macleodii str. 'Deep
ecotype']
gi|327551897|gb|AEA98615.1| flagellar motor protein MotB [Alteromonas macleodii str. 'Deep
ecotype']
Length = 309
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 7/167 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ S + + + K + + Q+ D + + +G +T I + S
Sbjct: 128 QSQQTATQSSSSAEQSTDQSQMAELMKKVAQQLEKQILDGSVEMESLGQQLTIRIRENGS 187
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADV 136
F FL+ +F P+L+ I T+L P I I H+D ++N +S +RA
Sbjct: 188 FSAGSAFLQPQFQPVLRKIGTLLADVPG-EIEISGHSDGQHIANELYRSNWDLSSQRAVA 246
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTND-TKVGRQNNQRIEIQI 182
+ + +SV G A PI N T R N+R+EI I
Sbjct: 247 VAEAMRTAPGFDESRMSVVGKADTAPIVENATTSADRAKNRRVEINI 293
>gi|254784323|ref|YP_003071751.1| HAD-superfamily hydrolase subfamily IA, variant 3 [Teredinibacter
turnerae T7901]
gi|237683781|gb|ACR11045.1| HAD-superfamily hydrolase subfamily IA, variant 3 [Teredinibacter
turnerae T7901]
Length = 373
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 72/174 (41%), Gaps = 5/174 (2%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCYI 76
C + DTD LD ++++ D G V+ + I+ +
Sbjct: 202 CANTPSGAPVDTRGCALDTDADG--VADYLDNCPATAARLKVDDRGCPVTLS-ETISINL 258
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V+ ++ +F ++ +A + ++ +T + IQ HTD+ N +SQ RA
Sbjct: 259 KVN-FDSGSAVVKPEFFSEIRKVADFMAQYENTRVEIQGHTDTSCAAAYNKSLSQRRASA 317
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + LI + + RG+ + PI T GR N+R+ Q+ + + ++
Sbjct: 318 VAAVLISEYGVAASRVDARGYGEEQPIADESTAAGRLANRRVVAQVSAQIDKQQ 371
>gi|253702421|ref|YP_003023610.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251777271|gb|ACT19852.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 253
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 56/145 (38%), Gaps = 6/145 (4%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPS 108
E + VS + + F L++ +L+ + + L+ + +
Sbjct: 107 IEAYLLKVGAQAKVSVSVTQRGLVVSLKEAGFFDSGSATLKQDSYALLKDVVSSLSSYSN 166
Query: 109 TVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ ++ HTD++ +N +S RA + YL ++ IS G+ P+
Sbjct: 167 G-LRVEGHTDNMPISSASFPSNWELSTARATNVLQYLTKQSDFDPYKISAAGYGEYRPVA 225
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNIK 189
N GR N+R++I + + +
Sbjct: 226 DNSEAEGRGKNRRVDIVLLSEQSER 250
>gi|88704266|ref|ZP_01101980.1| motB family protein [Congregibacter litoralis KT71]
gi|88701317|gb|EAQ98422.1| motB family protein [Congregibacter litoralis KT71]
Length = 286
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ DK +D + ++Q + V G IT I SF L F+P++ I
Sbjct: 112 AETEADADKLKDMLEDEVQTGKVDVESDGRTITVRIREQGSFPSGSATLNTDFVPVMARI 171
Query: 100 ATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + P T I+I+ HTDS G ++N +S RA + L++ G+ + + V
Sbjct: 172 REALTEIPGT-ISIEGHTDSTPLRGGRYESNWGLSSSRALSVTHELLREGLLKDDRMMVV 230
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
GFA P NDT GR +N+R+EI I
Sbjct: 231 GFADTRPFTFNDTVEGRASNRRVEIVI 257
>gi|322418016|ref|YP_004197239.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320124403|gb|ADW11963.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 459
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
+ + + + D V + + + V + + ++ + +
Sbjct: 311 APNTTDEGRQANRRIEAIIDCAFDVKEVQPPERLCMTLVVEFDTGKADIGPQYKGEMAKV 370
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A + ++P+T I+ HTD++G + N+ +S+ERA+ YL+ +S +G+ Y
Sbjct: 371 ADYMKQYPTTTAVIEGHTDNVGGYEYNMKLSRERAESAVRYLVDNFGIEKSRLSAKGYGY 430
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
+ N T GR N+RI I
Sbjct: 431 TRRVAYNRTAEGRAKNRRINAII 453
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + ++ + ++ + K+P+T I+ HTD++G + NL +S+ RA + Y
Sbjct: 228 FDIDRAVIRQENKDEIAVVCDFMKKYPTTTAVIEGHTDNVGAPEYNLDLSKRRAQAVVDY 287
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + RGF P+ N T GRQ N+RIE I
Sbjct: 288 LVTDCGIDRSRLEARGFGMARPVAPNTTDEGRQANRRIEAII 329
>gi|325275242|ref|ZP_08141202.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
gi|324099634|gb|EGB97520.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
Length = 231
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
L L IAT L + PS +++ HTDS+G+ N +S+ RA
Sbjct: 123 RDVHFEFDSARLTATDKERLNTIATRLKQEAPSARLSVSGHTDSVGSDSYNQKLSERRAH 182
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL+Q GV + F+SV G P+ N T GR N+R EI+I
Sbjct: 183 SVTDYLVQSGVPRSSFVSVVGAGETQPVADNATAEGRAMNRRTEIKI 229
>gi|254303029|ref|ZP_04970387.1| OmpA family membrane protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323221|gb|EDK88471.1| OmpA family membrane protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 386
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
S + + + + F + + + L +AT+L + I HTDS + +
Sbjct: 268 SIEANSLLITLDSGILFDVDKYDVRPEAERALASLATVLKEADVKAFEIDGHTDSDASDE 327
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S++RA+ +K +L +G++S I++ G+ P+ +NDT G+Q N+R+EI I
Sbjct: 328 YNQALSEKRANAVKDFLASQGLTSE--ITIIGYGESRPVASNDTPEGKQKNRRVEIII 383
>gi|332188223|ref|ZP_08389951.1| peptidoglycan-associated lipoprotein [Sphingomonas sp. S17]
gi|332011722|gb|EGI53799.1| peptidoglycan-associated lipoprotein [Sphingomonas sp. S17]
Length = 174
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 66/182 (36%), Gaps = 13/182 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK + + I+GC N N + D
Sbjct: 4 IKTTLVVATMALAIAGCAKKRPAVLPPAPVDQNAGVDPNAGQATPTD-----------GA 52
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ S + + + ++ + +L A L ++P+ I I+ H D G
Sbjct: 53 IVPGSDADFKRSVTSNTIHFGLDQYDIDPESRAILDSQAGWLMRYPNVRITIEGHCDERG 112
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IEI 180
T + NL + RA+ K+YL RGVS++R +V + + PI + N+R + +
Sbjct: 113 TREYNLALGDRRANAAKNYLAARGVSADRM-TVISYGKERPIALGSDEASYAQNRRAVTV 171
Query: 181 QI 182
+
Sbjct: 172 VL 173
>gi|153007835|ref|YP_001369050.1| OmpA/MotB domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151559723|gb|ABS13221.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 200
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 68/188 (36%), Gaps = 11/188 (5%)
Query: 5 LGLSMFIMTTISGCGLASREKK---KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
LGL++ + +++ S + + + + D + Q ++ +
Sbjct: 11 LGLALLCLPSVATAQNTSADNSAYIRDLVPEIRDLVSASGSTDGKARGLSGAAQEIVEKS 70
Query: 62 G-IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G I + D I + V F L K L IA IL P + + + +TDS
Sbjct: 71 GNITMRETEDSIVLSVTSDVLFDFDSAKLTGKAKATLTDIAKILESMPDSAVRVVGYTDS 130
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQN 174
G N +S+ RAD + + + + G P+ N D GR
Sbjct: 131 KGADSYNDKLSKSRADAVTK-FLVNNGVQSARLKPEGRGESEPVAPNEIKGKDNPDGRAQ 189
Query: 175 NQRIEIQI 182
N+R+E +
Sbjct: 190 NRRVEFVL 197
>gi|70728526|ref|YP_258275.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
gi|68342825|gb|AAY90431.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 262
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 63/148 (42%), Gaps = 6/148 (4%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
D + + D + Q L + + ++ L+ L
Sbjct: 105 AGDQRARAILDARDAQIKQLQDSLNA-----KQTDRGTLVTFGDVLFATNKSDLKSSGLV 159
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+ +A L + P + ++ +TDS G+ N +S+ RA ++ LI+ G+ R +S
Sbjct: 160 NINKLAQFLQQNPDRKVIVEGYTDSTGSDSYNQSLSERRAGSVQMALIRMGIDPARIVS- 218
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+G+ +YP+ N + GR N+R+E+ I
Sbjct: 219 QGYGKEYPVADNGSVSGRAMNRRVEVTI 246
>gi|156936614|ref|YP_001440528.1| hypothetical protein ESA_pESA3p05495 [Cronobacter sakazakii ATCC
BAA-894]
gi|156534868|gb|ABU79692.1| hypothetical protein ESA_pESA3p05495 [Cronobacter sakazakii ATCC
BAA-894]
Length = 567
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILN 104
LD A ++ + + + I + T + + + L+ +L +
Sbjct: 405 PLDAAISDWSAPVSSPPVNKNIITEPQTIRLDALSLFDTGQWRLKTGSTKVLVNALVGIK 464
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P +I + HTD +G + N +S +RA+ ++ ++ G +V+G+ P
Sbjct: 465 ARPGWLIVVAGHTDDVGDERANQQLSLKRAEAVRDWMRGTGDVPESCFAVQGYGESRPAV 524
Query: 165 TNDTKVGRQNNQRIEIQIFPRGN 187
N T GR N+R+EI + P+ +
Sbjct: 525 PNTTAEGRALNRRVEISLVPQAD 547
>gi|110640101|ref|YP_680311.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110282782|gb|ABG60968.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 670
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ S L + P L + +L P+ I + HTD+ G NL +S++R
Sbjct: 562 VELKNVFFHQSTPNLIETSYPELDRMVEVLKTNPTVRIELDGHTDNQGDAALNLALSEKR 621
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +K+YL+ + N+ I+ R F PI N+T+ R+ N+R+EI I
Sbjct: 622 VETVKAYLVSK-GIDNKRITTRAFGGTKPIAPNNTEENRKKNRRVEIIIL 670
>gi|332520949|ref|ZP_08397409.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332043479|gb|EGI79675.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 442
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 8/167 (4%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C K+ K + ++L++ ++ + + + I Y
Sbjct: 284 CPKQPGVKENQGCPKVLTPQEKQQL--ANLERQKNLDRNAKIKQQVT-----NDINNYCK 336
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V + L + L I I+N + + HTD++G+ NL +S++RA +
Sbjct: 337 AIVFNYGKTSLSPEGKKALDEIYKIMNLQKNMKFHVTGHTDNVGSKATNLALSEKRAASV 396
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
K+YLI + SN ++ +G+ + PI N T GR N+RIEI I
Sbjct: 397 KNYLITK-GISNSRVTSQGYGEENPIADNSTNEGRIKNRRIEIYITN 442
>gi|261251125|ref|ZP_05943699.1| protein F-related protein [Vibrio orientalis CIP 102891]
gi|260937998|gb|EEX93986.1| protein F-related protein [Vibrio orientalis CIP 102891]
Length = 205
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 74/204 (36%), Gaps = 25/204 (12%)
Query: 2 IKELGLSMFIMTTISGCGLASREKK--------------------KVFLHKSNDTDIVNK 41
+K L + ++ T++GC + E + + V
Sbjct: 1 MKR--LVLPLILTLAGCSNMADEIAMLGNDMLDTAPRSDFDVRHPEWGTPTNISPSGVRG 58
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
G ++ Q L G+ + G+ + + + F + L ++
Sbjct: 59 PMGQQRTQSYHNLQSFLTSNGVDYELLPGNHVMVKLKDTIKFNTGSSNVSPDSQYWLDMM 118
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ L P I I H DS G N +S +RA +K L++ V+ + + RG+
Sbjct: 119 GSYLATQPGIDIVIDGHADSTGAPTFNDGLSMKRASAVKRQLVRNNVAMDSIFT-RGYGE 177
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF 183
P +N TK G+ N+R+E+
Sbjct: 178 YVPACSNKTKAGKACNRRVEVLFI 201
>gi|260431631|ref|ZP_05785602.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415459|gb|EEX08718.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 643
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 60/174 (34%), Gaps = 9/174 (5%)
Query: 13 TTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
+SG + K+ K + + E + + +
Sbjct: 433 VALSGISHDQDARAKIAGLLSEKLGEGQNFDLSITYQPVPEPAETRPDPDACEARIVEVQ 492
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ L IA IL + + IQ HTDS G + N +
Sbjct: 493 SGGKIT-----FEPGSATVSADSRDSLNQIAEILRECGPIRMEIQGHTDSQGREEMNQQL 547
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
SQ RA I + L R V ++ S G+ PI N T+ GR+ N+RIE ++
Sbjct: 548 SQARAQSILNELRARRVPTSS-FSAVGYGETQPIADNGTEEGREENRRIEFRLI 600
>gi|251777807|ref|ZP_04820727.1| putative chemotaxis MotB protein [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243082122|gb|EES48012.1| putative chemotaxis MotB protein [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 244
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 77/214 (35%), Gaps = 33/214 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS------------------- 45
+ L M + + ++K K + + G+
Sbjct: 22 ITLLMVLFVVLYASSNVDKQKYKQISNSFKQAFSIGDAPGAINETGEETNENSIVNDAVM 81
Query: 46 ----SLDKAEDEFQMQLQD----TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
LD A+ + +++ + + +V F + ++ ++ L
Sbjct: 82 GESEKLDTAKSKVDELIKEYNLEGSVSTQIQERGLIISFNDNVFFNSGDATIKNEYKQKL 141
Query: 97 QLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
I+ ILN I ++ +TD+ +N +S RA + L++ G S+ +
Sbjct: 142 ISISKILN-NIDNYIRVEGNTDNVAINTENFHSNWQLSAIRAANVVELLVKEGNISSDKL 200
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S G+ P+ +NDT+ GR N+R++I I
Sbjct: 201 SAIGYGEYRPVKSNDTEDGRAANRRVDIVILNNE 234
>gi|153875874|ref|ZP_02003478.1| OmpA/MotB [Beggiatoa sp. PS]
gi|152067662|gb|EDN66522.1| OmpA/MotB [Beggiatoa sp. PS]
Length = 263
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ + QL + R +T + V L + ++ +A L + P
Sbjct: 131 INPQLEKQLNNWQ---QRQTGRLTITLNE-VFENDRTDLSQTAQSDIKTLAAFLKQHPYF 186
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I+I+ HTD+ G +NL +S+ RA + + + +++ I+V+GF PI +N T+
Sbjct: 187 RISIEGHTDNAGIHTHNLGLSERRATSV-KFALMNDGITSKRITVKGFGETRPIGSNRTQ 245
Query: 170 VGRQNNQRIEIQI 182
GRQ N+R+EI I
Sbjct: 246 QGRQKNRRVEIII 258
>gi|319785152|ref|YP_004144628.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171040|gb|ADV14578.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 335
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 63/164 (38%), Gaps = 10/164 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ E K + + A ++ L G + +
Sbjct: 181 SAMAGEDKDRAVVFVRVLEAKGMDPAKVATAAPEDLSDSLASQG----------SVNLYG 230
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ ++ ++ + P L IA +L P+ + I HTD+ G+ NL +S RA +
Sbjct: 231 ILFDYNQDAVKPESKPALDEIAKVLTDKPALRLKIIGHTDNAGSAAYNLDLSTRRAANVS 290
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L+ +S G PI++NDT GR N+R+E+ +
Sbjct: 291 AALVGGYGIDPARLSFEGAGLSRPIESNDTDEGRAKNRRVELVV 334
>gi|295690756|ref|YP_003594449.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295432659|gb|ADG11831.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
Length = 189
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 69/186 (37%), Gaps = 6/186 (3%)
Query: 3 KELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
K + ++ ++ T+SGC +V + + G +++ +
Sbjct: 6 KTMMVAAALVMGGLTVSGCATKKYVNTQVGAVNERVSAHDTQ-IGELDKTSKEALDRAIA 64
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTD 118
+ + + V+ L + L L + + IQ HTD
Sbjct: 65 AGKLAEGKFQYALVLSDDSVKFPVNAATLSPEAEQRLSEFTEKLKADNKNVYLEIQGHTD 124
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ G+ + N + ++RA+ + + + + ++ + + P+ N+T+ GR N+R+
Sbjct: 125 NSGSKEYNDELGEKRAETV-RKFLSQHGVALNRMATISYGQEAPVAPNETREGRAQNRRV 183
Query: 179 EIQIFP 184
+ +
Sbjct: 184 VVMVLS 189
>gi|114777177|ref|ZP_01452188.1| outer membrane protein [Mariprofundus ferrooxydans PV-1]
gi|114552322|gb|EAU54805.1| outer membrane protein [Mariprofundus ferrooxydans PV-1]
Length = 212
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ L + L LN+ + + + +HTDS G+ NL +S+
Sbjct: 102 IIKLEGVYFDNDSAKLRPASVATLDKAVATLNRRATIKVEVAAHTDSSGSDAYNLSLSER 161
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA ++ YL+ G+ + R ++ +G+ PI +N TK GR N+R+E+++
Sbjct: 162 RAASVRDYLVAHGIDAAR-LTSKGYGETQPIASNATKEGRAKNRRVELRVMN 212
>gi|326334458|ref|ZP_08200670.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325693425|gb|EGD35352.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 455
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 73/180 (40%), Gaps = 14/180 (7%)
Query: 17 GCGLASREKKKV--------FLHKSNDTDIVNKRFGSSL---DKAEDEFQMQLQDTGIVV 65
GC + N G + D + G
Sbjct: 276 GCPDTDGDGVPDKDDKCPDVAGPAENGGCPWPDTDGDGVLDKDDLCPNEAGSASNKGCPE 335
Query: 66 SRIGDMITCY--IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
D + + ++ + +L I ++LNKFP++ I+ HTDS G
Sbjct: 336 PNDDDQKRLNQYAKTILFDTGKATIKFQSADVLNQIISVLNKFPNSRFRIEGHTDSTGKK 395
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N ++SQ RAD +K YLIQ G+ +NR SV G+ PI +N TK GR+ N+R+EI +
Sbjct: 396 AKNQVLSQNRADAVKVYLIQGGIDANRLESV-GYGQDKPIASNKTKKGRELNRRVEINLI 454
>gi|332993882|gb|AEF03937.1| peptidoglycan-associated lipoprotein [Alteromonas sp. SN2]
Length = 188
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 69/180 (38%), Gaps = 6/180 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREK---KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
++K + + ++T ++ C E+ + + + E E +
Sbjct: 6 LMKSFIIVLPVVTMMA-CSSGPSEEELAAERNRLAQEQAQAEQDARQAEAQRVEAEAAQR 64
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
++ + +V + + + ++ +F +L A L K PST + I+ HT
Sbjct: 65 MKRSEEMVQQEMEALK-NEQTVYFDFDRASIKPEFQRLLDKHAAFLVKNPSTKVTIEGHT 123
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
DS GT + N+ + + RA + + S+ I+V + + T+ N+R
Sbjct: 124 DSRGTPEYNIALGERRAQSV-ETYLMNAGVSSSQITVVSYGEEKSAVMGSTEYAFAQNRR 182
>gi|218960421|ref|YP_001740196.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
gi|167729078|emb|CAO79989.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
Length = 781
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 2/148 (1%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D + + + Q + + + L+ + P+L
Sbjct: 634 DTNPSGYSMYSTRIKPPSQSSRVRQDLRLEPLDLDKVFVFSNIQFDYDSAVLKAESYPIL 693
Query: 97 QLIATILNKFPSTVIAIQSH-TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
IA L P+ + I H ++ G K N +S+ RA + SYL +GV++NR ISV
Sbjct: 694 NEIALTLLNNPTIRVEISGHTCENQGGEKYNTTLSENRAAAVLSYLKGKGVNANRMISV- 752
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
G+ P++ N ++ + N+R+E++I
Sbjct: 753 GYGLSRPLNNNLSEEDKALNRRVEVKII 780
>gi|315187219|gb|EFU20976.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578]
Length = 430
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 1/170 (0%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
+ G +A + L + + ++L ++ V ++ + I
Sbjct: 260 FLPGTTIALLSESLSPLLSPTPSPLATPEPSTTLTSPSPAEELASLGEENSVEKVPEGIK 319
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + L L ++A L K P I + HT +G + + +S R
Sbjct: 320 ITLRTLHFLPDQAVLLPGEEAKLDILAEALKKAPDRTILVVGHTADVGKPQGQMALSVAR 379
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A I L++RG+ +R I G P+ N T+ GR+ N+R+EI +
Sbjct: 380 AKTIVEELVKRGIEPDRLIY-LGKGGTEPVAPNHTEEGRRLNRRVEIFLL 428
>gi|124005217|ref|ZP_01690059.1| outer membrane protein [Microscilla marina ATCC 23134]
gi|123989469|gb|EAY29030.1| outer membrane protein [Microscilla marina ATCC 23134]
Length = 687
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ L + P L +A + + P+ I ++ HT+ G K + +S++
Sbjct: 576 LVRLNNIFFSRGSARLLPESYPELNRLAKAMKENPTMRIRLEGHTEIFGNKKFLMNLSKQ 635
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
R ++ YL ++ ++R + ++GF YK P+ + R N+R+E++I +
Sbjct: 636 RVKSVQKYLSEK-GINDRRVKLKGFGYKRPLSRKKDEKSRALNRRVEVRILSK 687
>gi|326791532|ref|YP_004309353.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427]
gi|326542296|gb|ADZ84155.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427]
Length = 248
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 65/168 (38%), Gaps = 7/168 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S+ K + + + + + D I V + GDMI +
Sbjct: 76 SQFPVKETQFSIEQAYQEAQETTKAEQDIKAYVKAKEIDDKITVQKSGDMIVIRFADILL 135
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLK----NNLLISQERA 134
F + ++ +P L LI L ++ + ++ HTD+ +N +S RA
Sbjct: 136 FDTGKADIKPGAIPNLNLIGEKLREYIDQGYHLRVEGHTDNQPIHTAQFPSNWELSSARA 195
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + ++ + IS G +PI +N T R N+R+EI++
Sbjct: 196 IAVMRFYLEEMDFNPSKISAEGMGEYHPISSNATSEERAQNRRVEIKL 243
>gi|237740939|ref|ZP_04571420.1| outer membrane protein [Fusobacterium sp. 4_1_13]
gi|229430983|gb|EEO41195.1| outer membrane protein [Fusobacterium sp. 4_1_13]
Length = 147
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ +L+ I + + + I I HTDSIG+ N +S+
Sbjct: 19 IVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQN-NYEITIVGHTDSIGSNAYNFKLSR 77
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA+ +K+ L++ G+S +R + + + PI TN TK GR N+R+E ++ R ++
Sbjct: 78 RRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRETVQ 135
>gi|167624989|ref|YP_001675283.1| flagellar motor protein MotB [Shewanella halifaxensis HAW-EB4]
gi|167355011|gb|ABZ77624.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 322
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 7/169 (4%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+ + + + K E ++ D I + +G I I SF S
Sbjct: 148 QSETESTKTQASAQDKINEQVKKMAQELNKEIVDGAIEIESLGQQIIIRIREKGSFASGS 207
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYL 141
FL+ +F P+++ + +L P + + HTD +N +S +RA + L
Sbjct: 208 GFLQPRFKPVVRRVGELLKDVPGI-VTVSGHTDDWKISNELYSSNWDLSSKRAVAVAHEL 266
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
I+ + + V G A P+ N++ R N+R+EI I +G K+
Sbjct: 267 IRVKGFDQQRMKVVGMASSAPLVENNSSANRARNRRVEIAI-EQGKAKE 314
>gi|254228271|ref|ZP_04921700.1| OmpA family protein [Vibrio sp. Ex25]
gi|262394176|ref|YP_003286030.1| outer membrane protein [Vibrio sp. Ex25]
gi|151939344|gb|EDN58173.1| OmpA family protein [Vibrio sp. Ex25]
gi|262337770|gb|ACY51565.1| outer membrane protein [Vibrio sp. Ex25]
Length = 204
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 79/197 (40%), Gaps = 12/197 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + L + + IS C + + + + + D D +E + T
Sbjct: 1 MKYITL-IALSLMISACSSSDKGDEYDY-IDTPIADQWADHLDDDSDGVINE-RDLCPGT 57
Query: 62 --GIVVSRIGDMITC----YIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQ 114
G + G + + V F ++ + F ++ ++ L ++P+T I IQ
Sbjct: 58 PLGAEIDNDGCGSYVDSSQEMQIRVLFANDSDVINPIFTEQIRELSDFLKEYPNTSIEIQ 117
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ GT ++NL +S+ RA+ ++ L+ S +++ G+ +V
Sbjct: 118 GYASRTGTAEHNLDLSKRRAENVRKELMMN-GISGDRVTIVGYGDTVLATQGTDQVSHAL 176
Query: 175 NQRIEIQIFP-RGNIKK 190
N+R+ + +G +KK
Sbjct: 177 NRRVTATVIGHKGEVKK 193
>gi|148287120|emb|CAK36854.1| outer membrane protein A [Bordetella ansorpii]
Length = 181
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + +L +A+ +N + HTDSIG+ N +S+ RA +
Sbjct: 73 DTFFDFDKSTLKPEGRQLLDQVASQVNTINLETLIAVGHTDSIGSDAYNQKLSERRAASV 132
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
KSYL+ + I G K P+ +N T+ GR N+R+EI+I
Sbjct: 133 KSYLVSK-GIDPNRIYTEGKGEKQPVASNSTREGRAKNRRVEIEIV 177
>gi|325123093|gb|ADY82616.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
calcoaceticus PHEA-2]
Length = 186
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 8/180 (4%)
Query: 2 IKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
IK L L + ++GC +K + G S D A + L
Sbjct: 4 IKYLALPFLSVALVMTGCAS----RKPAATTTTGTNPSTVNTSGLSEDAALNA--QNLAG 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V L + LQ A L ++ +A+ HTD
Sbjct: 58 ASSKGVTEANKAALAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSKVALTGHTDER 117
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA ++SYLI + + + + + P++ + + N+R+EI
Sbjct: 118 GTREYNMALGERRAKAVQSYLITN-GVNPQQLEAVSYGKEAPVNAGHDESAWKENRRVEI 176
>gi|297568668|ref|YP_003690012.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2]
gi|296924583|gb|ADH85393.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2]
Length = 288
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 2/143 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
+D+ E +++ + + D + + L++ LQ
Sbjct: 145 AGSTILIIIDEEPLEIKLEFGPDQMKAALDADG-RIALYGILFDYDRATLQQASSKQLQG 203
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
I T+L+ P + IQ HTDS G+ NL +SQ RA+ + +YL+ G+ +R S +G+
Sbjct: 204 IVTLLHDHPDLRLEIQGHTDSDGSAAYNLQLSQRRAESVLNYLLLFGIDPSRLKS-KGYG 262
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQ 181
P+ NDT + N+R+E+
Sbjct: 263 ETMPVAPNDTAENKAKNRRVELV 285
>gi|218961893|ref|YP_001741668.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
gi|167730550|emb|CAO81462.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
Length = 911
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+S++ + ++ L K L +L+ I + + + I + HTD+IG+ +
Sbjct: 674 LSKLEKEAVFELENVEFEFNKAVLTPKSLEILKPILATMKENETLEIELSGHTDNIGSKQ 733
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S+ RA + YLI+ G+ R +V G+ + PI +NDT GRQ N+R E++I
Sbjct: 734 YNRKLSEARAKAVADYLIKNGIDPKRIKTV-GYGFDKPIASNDTPEGRQRNRRTEMKIL 791
>gi|320106074|ref|YP_004181664.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4]
gi|319924595|gb|ADV81670.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4]
Length = 524
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
K + + QL + + + + L+ L +A I+ P
Sbjct: 378 KLRQQMRDQLNSILAT-KETPRGLVVSLSDVLFDTGKYTLKGDTKISLAKVAVIVASHPD 436
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ ++ +TDS+G+ N +S+ RA+ +K++LI V+ I+ G+ +P+ N T
Sbjct: 437 LKLQVEGYTDSVGSDDLNQKLSENRANSVKAFLIANSVNPGN-ITSLGYGKSHPVADNGT 495
Query: 169 KVGRQNNQRIEIQI 182
GR N+R+E+ I
Sbjct: 496 SAGRAQNRRVELVI 509
>gi|315498692|ref|YP_004087496.1| peptidoglycan-associated lipoprotein [Asticcacaulis excentricus CB
48]
gi|315416704|gb|ADU13345.1| peptidoglycan-associated lipoprotein [Asticcacaulis excentricus CB
48]
Length = 184
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 62/179 (34%), Gaps = 9/179 (5%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K +L L +++ C KK + +
Sbjct: 1 MTKSVFKLALMACATLSVAACA-----GKKPEVVTPPPAVAEQPTPAPAYTPPPAADTKP 55
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L TG V D + + + L + +L A L ++P+ + I+ +
Sbjct: 56 LSPTGPVPGSQQDFVVNVGDRVFFELDQSSLREDAKALLDKQAAWLVRYPAVKVRIEGNA 115
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
D GT + N + RA+ + YL +GV +R IS + + PI T + N+
Sbjct: 116 DERGTREYNFALGARRAESVSQYLTSKGVVPSR-ISTISYGKENPIATGTDEEAWSQNR 173
>gi|149917241|ref|ZP_01905740.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149821848|gb|EDM81242.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 188
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 71/181 (39%), Gaps = 18/181 (9%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
+ + + ++S CG E + + ++ E + V
Sbjct: 1 MLVAALVSLSACGPRVFEGESAKVIEAT----------------ELPPPPEPPKVDARVE 44
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKN 125
D I + +++ +L +A ++ P I ++ H + G +
Sbjct: 45 VTDDKIVIH-EKIAFEYDAAKIQRVSHDLLAEVAQVILDNPRIELIRVEGHASAEGEADH 103
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
NL +SQ RA+ ++++L+++G + GF PI N+T+ GR N+R+E I +
Sbjct: 104 NLELSQRRAEAVRAHLVKKGGVPEARLEAEGFGEDRPIADNETEEGRGQNRRVEFVIVRQ 163
Query: 186 G 186
Sbjct: 164 A 164
>gi|228471770|ref|ZP_04056543.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624]
gi|228276923|gb|EEK15618.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624]
Length = 455
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ + +++ Q QL +
Sbjct: 303 GCPWPDTDGDGVLDKDDLCPEVAGPASNKGCPEPDEKEQKQLNQYAKTI----------- 351
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + ++ + +L I +L K+P++ I+ HTDS G N+++SQ RAD
Sbjct: 352 ---LFDTGKATIKFQSAEVLNQIINVLKKYPNSRFRIEGHTDSTGKKAKNMILSQNRADA 408
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + +G + +GF + PI +N K GR+ N+R+EI +
Sbjct: 409 V-KVYLIQGGIDAGRLESQGFGPEKPIASNKNKKGRELNRRVEINLI 454
>gi|261414988|ref|YP_003248671.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371444|gb|ACX74189.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326246|gb|ADL25447.1| ompA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 756
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 60/165 (36%), Gaps = 5/165 (3%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM-QLQDTGIVVSRIGDMITCYI 76
C + D DK + Q+ G + R D+
Sbjct: 486 CPDTP--EGVAVDADGCPLDTDKDGVPDYRDKCPNTLPGIQVNKRGCPLRRKEDLDYLKK 543
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ F L K P L I +L K P + +Q HTD +GT N +S++RA
Sbjct: 544 GIQFEF-DSAKLLKSSYPTLDDIIALLEKIPEVKLEVQGHTDIVGTEDYNQKLSEDRAHS 602
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ Y + + + GF + P+ N T GR N+R+E+
Sbjct: 603 VTDYFQSK-GIAADRLRAIGFGTRMPLADNVTDEGRAKNRRVELI 646
>gi|127511243|ref|YP_001092440.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
gi|126636538|gb|ABO22181.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 201
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 81/196 (41%), Gaps = 14/196 (7%)
Query: 2 IKELGLSMFIMTTISGCGL-----ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+K L + + + + GC +VF D D V D
Sbjct: 1 MKALLI-ILSVALLGGCASRDIVTMDTPTNQVFDLNDKDKDGVIVARERCNDTVLGATID 59
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
I + + +++ ++ ++++AT + ++P+T + I+ H
Sbjct: 60 NYGCGKIKPINERQELKI-----LFANDSYYIDPQYYDQVEVVATFMRQYPNTKVTIEGH 114
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
G+ ++NL +SQ RAD + S L +R ++ ++ G++Y P+D TK+ N+
Sbjct: 115 CSKTGSYEHNLALSQNRADAVTSLLSERFGIASDRLTAIGYSYDRPVDPTHTKMAHTRNR 174
Query: 177 RIEIQIF---PRGNIK 189
R+ ++ + ++K
Sbjct: 175 RVIAEVTGEDTKADMK 190
>gi|304317567|ref|YP_003852712.1| OmpA/MotB domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779069|gb|ADL69628.1| OmpA/MotB domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 240
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 6/142 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
+ + + + + + F ++ L I IL
Sbjct: 90 SQLDKLIKQNNLQNMVTYKVDERGFVISLNDTLLFDTGSADVKPDQKATLIKIGNILKAM 149
Query: 107 PSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I ++ +TD++ +N +S RA + L+ IS G+ P
Sbjct: 150 PNY-IRVEGYTDNVPINNSQFHSNWELSVIRATNVVEILVNDVKIDPAKISAVGYGEYRP 208
Query: 163 IDTNDTKVGRQNNQRIEIQIFP 184
I ND+ RQ N+R++I I
Sbjct: 209 IVPNDSDKNRQLNRRVDIVIMN 230
>gi|82523863|emb|CAI78811.1| outer membrane protein and related peptidoglycan-associated
[uncultured candidate division WS3 bacterium]
Length = 192
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 67/183 (36%), Gaps = 8/183 (4%)
Query: 5 LGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE------DEFQMQ 57
+ + M ++ + GCG + + + + L+ AE D F+ +
Sbjct: 8 IVMVMAVILLAAVGCGKKPEPATDLDMAARMSSADSLDASDTDLESAEGLSRFDDLFKKK 67
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
I + + L ML A + + P I I+ H
Sbjct: 68 PAAEEIETVETKPAPVLVMDDIHFEFDKYTLTADARRMLAQTAKAMKEMPEVRIQIEGHC 127
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
DS GT + NL + Q RA K YL+ G+ + R +S+ F + P+D + + N+R
Sbjct: 128 DSRGTQEYNLALGQRRAQAAKDYLVNLGIDAAR-VSIISFGEERPLDPRENEEAWAKNRR 186
Query: 178 IEI 180
Sbjct: 187 AHF 189
>gi|294013407|ref|YP_003546867.1| peptidoglycan-associated lipoprotein [Sphingobium japonicum UT26S]
gi|292676737|dbj|BAI98255.1| peptidoglycan-associated lipoprotein [Sphingobium japonicum UT26S]
Length = 170
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 25/178 (14%), Positives = 59/178 (33%), Gaps = 17/178 (9%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L + ++ C ++ +
Sbjct: 7 LLMATAIVALAACSKKPPQELPPAPGGDASAQTGG---------------PATPSGPVKG 51
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
S+ + + + + ++ + +LQ A L + P+ + I+ H D GT
Sbjct: 52 SQEDFVASVSSDRILFDTDQYDVDAQDQQILQSQAAWLQQNPNVRVTIEGHADERGTRDY 111
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IEIQI 182
N+ + + RA+ K+YL G+ + R I+ + + P + N+R + + +
Sbjct: 112 NIALGERRANAAKNYLASLGIDAGR-ITTVSYGKERPAALGSDEAAWAQNRRAVTVTV 168
>gi|23099999|ref|NP_693465.1| motility protein B [Oceanobacillus iheyensis HTE831]
gi|22778230|dbj|BAC14500.1| motility protein B (flagellar motor rotation) [Oceanobacillus
iheyensis HTE831]
Length = 257
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 8/144 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E E QL G ++ G MIT + +++ + ++ +L P
Sbjct: 115 QEHELTEQL---GTELTDEGLMITL-VNEVFFDSGSAEVKETSKEIANDVSNLLYTEPPH 170
Query: 110 VIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+ I H D + +N +S RA + +++ S +G+ PI
Sbjct: 171 QVVISGHADDVPIETEEYNSNWELSVSRAINFMTLILENEELDPTLFSAKGYGEFQPIVP 230
Query: 166 NDTKVGRQNNQRIEIQIFPRGNIK 189
N + R N+R+E+ I P +I+
Sbjct: 231 NTSAENRAKNRRVEVLILPNYDIQ 254
>gi|319762344|ref|YP_004126281.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans
BC]
gi|330825735|ref|YP_004389038.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans
K601]
gi|317116905|gb|ADU99393.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans
BC]
gi|329311107|gb|AEB85522.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans
K601]
Length = 180
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 67/179 (37%), Gaps = 7/179 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
K + L++ I ++GC + K + + G + + L +
Sbjct: 6 FKRVSLALTIAALMAGCSSGVKLDDVPVEDKGATSTVPGANSGGT--SQSGVAPVDLTQS 63
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G R + ++ ++ +L+ + L + + ++ HTD G
Sbjct: 64 G----REAGGPVGVARIIYFDFDSFTVKPEYQSVLEGHSRYLKASSARKVMLEGHTDERG 119
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL + Q+RA+ ++ L GV + +V + + P ++ N+R+E+
Sbjct: 120 GREYNLALGQKRAEAVRRSLALLGVPDAQMEAVS-YGEEKPAAQGHSESAFAQNRRVEL 177
>gi|114565809|ref|YP_752963.1| hypothetical protein Swol_0240 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114336744|gb|ABI67592.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 281
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 76/214 (35%), Gaps = 32/214 (14%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-------------- 48
K ++ + +SG +++ + + + ++ + G+ D
Sbjct: 48 KFAAVANSLSLVLSGQAMSTLSTQGPSMVEGLSGQMLPEGPGTIPDNQGQLDEVKRMIAE 107
Query: 49 --KAEDEFQMQLQDTGIV----------VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPM 95
KAED + Q G V + + F L + +
Sbjct: 108 FIKAEDLTADEAQKGGSTSTTRLSDNLIVYEQERGLVISFKDTMLFASGSDELTPRAREI 167
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRF 151
+Q I L K P+ I ++ HTD+ +N +S RA + L +
Sbjct: 168 IQQIGGALLKLPNF-IRVEGHTDNRPINTAKFPSNWELSVLRASNVVHVLNENARIPAER 226
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S+ G+ P+ ND+ GR N+R++I I +
Sbjct: 227 LSIIGYGENRPLVANDSDEGRAMNRRVDIVILKK 260
>gi|238751686|ref|ZP_04613175.1| hypothetical protein yrohd0001_18130 [Yersinia rohdei ATCC 43380]
gi|238710096|gb|EEQ02325.1| hypothetical protein yrohd0001_18130 [Yersinia rohdei ATCC 43380]
Length = 575
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 55/109 (50%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L+ +L + P +I + HTD G K+N ++S +RA+ ++
Sbjct: 443 SLFDVGQSTLKSGSTKVLINALVGIKAKPGWLIVVAGHTDITGESKSNQILSLKRAESVR 502
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ G +V+G+ P+ NDT+ GR N+R+EI + P+ +
Sbjct: 503 NWMRDTGDIPESCFAVQGYGQSRPLKPNDTETGRALNRRVEISLVPQAD 551
>gi|108759341|ref|YP_630319.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108463221|gb|ABF88406.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 639
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 3/167 (1%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C K ++ ++ + E D+ V D I
Sbjct: 439 CPDKPGPKDYDGCPDTDGDEVPDNEDDCPEQFGPPENNGCPYDSPPYVVVESDRIRIK-G 497
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++K+ P+L +AT+L K P+ + I+ HTD+ G+ N+ +S RA
Sbjct: 498 NVLFETGSAVIQKQSYPLLDEVATVLRKNPTLGPVLIEGHTDNRGSRALNMGLSDRRAKS 557
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ YL+ + + + +S +GF + PI TNDT +GR N+R++ ++
Sbjct: 558 VLEYLVAK-GIARKRLSSKGFGFDNPIATNDTALGRAKNRRVDFRLV 603
>gi|218778169|ref|YP_002429487.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218759553|gb|ACL02019.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 381
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
G D+ ++ L + + D + ++ + KK+ P++ +L
Sbjct: 240 GPDQDEDGAPDRIDLCPNTPAGASVDDSGCWQLTGLEFKTNKADIAKKYYPIMDKAICVL 299
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
K+P + I HTDS G K N +SQ+RA + Y++++GV+ R +SVRGF PI
Sbjct: 300 KKYPDLKVLIGGHTDSRGPDKFNQELSQDRAQAVMDYMVKKGVAPER-LSVRGFGAAKPI 358
Query: 164 DTNDTKVGRQNNQRIEIQ 181
ND+K GR N+R+ +
Sbjct: 359 AANDSKEGRAQNRRVTLT 376
>gi|298206940|ref|YP_003715119.1| putative flagellar motor protein MotB [Croceibacter atlanticus
HTCC2559]
gi|83849574|gb|EAP87442.1| putative flagellar motor protein MotB [Croceibacter atlanticus
HTCC2559]
Length = 321
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 65/158 (41%), Gaps = 9/158 (5%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKF 92
+ V + + + L + G+ V + + + + F S + +
Sbjct: 153 ESVIAAKEAKMQALKTAVSSALGDFEGKGLTVEQRNGKVYVSMENKLLFNSGSWAVGSEG 212
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVS 147
+ + +L P + I+ HTD+ G L++N +S +RA I + L +
Sbjct: 213 RRAVNQLGEVLASNPDIAVLIEGHTDNVPYGGNGPLQDNWDLSTKRATSIVNILRENSQI 272
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ ++ G PI +ND+ G+ N+RIE+ + P+
Sbjct: 273 DPQNLTAAGRGEYLPIASNDSATGKAKNRRIEVILTPK 310
>gi|15838494|ref|NP_299182.1| outer membrane protein P6 precursor [Xylella fastidiosa 9a5c]
gi|9106989|gb|AAF84702.1|AE004009_9 outer membrane protein P6 precursor [Xylella fastidiosa 9a5c]
Length = 186
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 69/181 (38%), Gaps = 10/181 (5%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L +S+ + + C +E+ V + T ++
Sbjct: 16 LLISLLSTSALVACSKKVKEQPHVPVKTMAPTVSTPAPTTTAPTD---------SSGLYT 66
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + V + ++K+F +L A L PS I +Q +TD G+ +
Sbjct: 67 AADLDTDACLRQRVVYFDFDKDDVKKEFQTVLGCHAKYLRNRPSAHITLQGNTDERGSRE 126
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ + + R + + Y +Q +S+ ++V + + P+ T T+ N+R+EI
Sbjct: 127 YNIALGERRGNSVL-YSLQANGASSGQLNVVSYGEERPVCTESTESCWSRNRRVEIVYTA 185
Query: 185 R 185
+
Sbjct: 186 K 186
>gi|34556650|ref|NP_906465.1| CADF precursor [Wolinella succinogenes DSM 1740]
gi|34482364|emb|CAE09365.1| CADF PRECURSOR [Wolinella succinogenes]
Length = 341
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 66/170 (38%), Gaps = 11/170 (6%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
E K S D D + V++ G I V
Sbjct: 183 KEPEPIKPAPVASAPLDSDGDGVTDDKDLCPGTPKN------FKVNQEGCPIQYTFLVQF 236
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F + ++ ++ A L ++ HTDS G+ N +S +R++ +K
Sbjct: 237 PF-DSAEITPAYMDEVKDFALFLENHKGVSAKLEGHTDSKGSDAYNKKLSAKRSNAVKEA 295
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
LI+ G+ +R +S GF + PI N T GRQ N+R+E I P +KK
Sbjct: 296 LIKLGIDKSR-LSSEGFGEERPIADNATDEGRQKNRRVEAIIAP---LKK 341
>gi|254448733|ref|ZP_05062191.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015]
gi|198261741|gb|EDY86028.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015]
Length = 207
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 62/201 (30%), Gaps = 23/201 (11%)
Query: 1 MIKELGLSMF---IMTTISGCGLASREKKKVFLHK----------------SNDTDIVNK 41
M+K ++ + C + +
Sbjct: 2 MMKSFKSALLFSVCAIALVACETPGGTQSGGTSSTDEFLPDDQQGLTDEELAAQGPNGGA 61
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIA 100
S + + + + + V F + ++++F +L A
Sbjct: 62 NGQSGTETF--ALSDCEPECDYPREALDNPDSLLSKRMVFFAFDSDQVKEEFNDVLIAHA 119
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L P + ++ HTD GT + NL +S+ RA + + + ++V GF +
Sbjct: 120 KYLASNPDVSVRLEGHTDERGTREYNLALSERRAKAV-RQFLMLYGAPAESVNVYGFGEE 178
Query: 161 YPIDTNDTKVGRQNNQRIEIQ 181
P+ T+ N+R E+
Sbjct: 179 LPLALGSTEEAYAENRRAELV 199
>gi|82703826|ref|YP_413392.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
gi|82411891|gb|ABB76000.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
Length = 175
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 65/180 (36%), Gaps = 9/180 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L + +++ ++ C +++ + + + + Q + +
Sbjct: 1 MKKV-LGVLLISLLTACASQTKQPGDADMEDRDRSRDAAAA-------QREGMQAEDYTS 52
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ ++ +F ++ A L + P+ + +Q +TD G
Sbjct: 53 PTLNPLTDPNSILSKRSIYFDFDSYVVKDEFRSLVAAHAKYLREHPNARVLLQGNTDERG 112
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + NL + Q RAD + Y + + I + P + N+R++I+
Sbjct: 113 SREYNLALGQRRADAV-KYAMTLSGAQEGQIEAVSLGEEKPHAMGHDEAAWAENRRVDIR 171
>gi|319787078|ref|YP_004146553.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
gi|317465590|gb|ADV27322.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
Length = 323
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 64/176 (36%), Gaps = 7/176 (3%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
T + R V + ++ G+ + E+ + I V R +
Sbjct: 102 TLLPALASHMRTGVPVDVSDRATVQRAQRQLGTIAARLEEALSPLVDARLITVRRAELWL 161
Query: 73 TCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNL 127
I + F L+ +L +A +L P+ + ++ +TD +N
Sbjct: 162 EVEINSDILFDTGSASLDASARQVLSRLADVLRDTPN-PVRVEGYTDDRPINTVQFPSNW 220
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S RA + GV+ R +++ G+ P N T+ GR N+R+ + +
Sbjct: 221 ELSAARAASVVHLFSANGVAPER-LAMVGYGEHRPRADNLTEEGRNRNRRVVLIVL 275
>gi|317127982|ref|YP_004094264.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
gi|315472930|gb|ADU29533.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
Length = 484
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQD----TGIVVSRIGDMITCYIPVHVSF-VSEVFLE 89
DIV + + + E + ++ + + +++ P + F + L+
Sbjct: 326 TGDIVIEATDNVRARIEAKLFLEPPELSVPEEVFITKDDGETMLTFPDDILFDFDQSSLK 385
Query: 90 KKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
++ +++ + L+ T+I I+ HTD+ G N ++S+ERA+ + +++ G S
Sbjct: 386 EEAKEVIKEVLPALDSLKDGTIIEIRGHTDNEGDPDYNYILSEERAESVYNFVRNSGESL 445
Query: 149 NRF-ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ V+ F PI +N+ + GR+ N+R+E+ I PR
Sbjct: 446 DHIEFRVKAFGETAPIASNEDEEGRERNRRVELVIDPRD 484
>gi|326799849|ref|YP_004317668.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326550613|gb|ADZ78998.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 302
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ ++QD + V + ++ + ++ + + L IA I+ + + I
Sbjct: 139 REEMQD--VDVQVLKGVVYISLSDNMLYKSGSYEISPAAGETLGKIAKIIMDYKEYEVLI 196
Query: 114 QSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ +TD++ + NN +S RA + L + ++ G PI +NDT+
Sbjct: 197 EGNTDNVPISQKNIRNNWDLSALRASSVVQALQNDYGVDPKRLTAGGRGEYNPIASNDTE 256
Query: 170 VGRQNNQRIEIQIFPR 185
GR N+R +I I P+
Sbjct: 257 AGRTRNRRTQIIITPK 272
>gi|253997443|ref|YP_003049507.1| peptidoglycan-associated lipoprotein [Methylotenera mobilis JLW8]
gi|253984122|gb|ACT48980.1| peptidoglycan-associated lipoprotein [Methylotenera mobilis JLW8]
Length = 191
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 62/182 (34%), Gaps = 5/182 (2%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHK---SNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
K++ ++ + +S C K + + + + + ++
Sbjct: 8 KKVLGALVLAAMLSACKSTPMTDKPAAVQDKSPAGASTQSSANSAADTSGVKEVVIDSNA 67
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ G + + I ++ ++ P+++ A L + + +Q +TD
Sbjct: 68 NNGNNPLKDPNNI-LSKRNIYFDFDSDSVKAEYRPIVEAHAKYLLANSNAKVVLQGNTDE 126
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N+ + Q RA +K ++ I + + Q N+R+E
Sbjct: 127 RGTREYNVSLGQRRAVSVKKSF-NLLGVQDKQIETVSLGEEKASANCADEACHQQNRRVE 185
Query: 180 IQ 181
+
Sbjct: 186 VV 187
>gi|225181601|ref|ZP_03735042.1| OmpA/MotB domain protein [Dethiobacter alkaliphilus AHT 1]
gi|225167709|gb|EEG76519.1| OmpA/MotB domain protein [Dethiobacter alkaliphilus AHT 1]
Length = 227
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 6/139 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFP 107
+ + Q + I V + I + F + + +L +A IL P
Sbjct: 76 EVKSHLQEEGLANIIDVRIEDRGVVLEIQDRLLFDTGRAEIRPEARELLVKVAGILANVP 135
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ I ++ HTD++ +N +S +RA + YL +R G+ P+
Sbjct: 136 N-QIIVEGHTDNVPIQTAQYPSNWELSVDRAVRVVRYLSERQDIDPERFLATGYGEFQPV 194
Query: 164 DTNDTKVGRQNNQRIEIQI 182
+N+T GR N+R+ I I
Sbjct: 195 ASNETVQGRAKNRRVNIVI 213
>gi|322435021|ref|YP_004217233.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
gi|321162748|gb|ADW68453.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
Length = 255
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 9/159 (5%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFL 88
+ + ++ + + KA+ E + QL + V GD + + F +
Sbjct: 89 VPSAAESAEATEIRLKEVVKAQVE-KKQLTSDAVSVRATGDGLVVSLREAGFFASGSADV 147
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQR 144
+ L +LQ +A L P + ++ HTD+I N +S RA I LI +
Sbjct: 148 RPEALAVLQTVAAAL---PRQSMRVEGHTDNIPIHTTQFATNWELSTARAATITRLLIAQ 204
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S G A PI N T GR N+R++I +
Sbjct: 205 NAVDPAQVSAAGDAEFRPIADNATDAGRAQNRRVDIILL 243
>gi|261415986|ref|YP_003249669.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372442|gb|ACX75187.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 700
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/178 (22%), Positives = 70/178 (39%), Gaps = 14/178 (7%)
Query: 17 GCG-LASREKKKVFLHK--SNDTDIVNKRFGSSLDKAEDEFQMQLQDT-----GIVVSRI 68
GC + ++ L K + + G +D +D L G+ V +
Sbjct: 520 GCSPDSDKDGIVDALDKCPNTPAGVSVDEVGCPVDSDKDGVADHLDKCPNTLVGVAVDKN 579
Query: 69 G-----DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
G + L L IA +L K P+ + +Q HTD G+
Sbjct: 580 GCPNKNQDLDKLKKGIQFKTGSAKLTASSNKTLNNIAKLLKKLPAVNLEVQGHTDDTGSE 639
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N +S++RA + YL+++ + + G+ PI N TK GR+ N+R+E+
Sbjct: 640 EKNKTMSEQRAQAVVKYLVKK-GIDSERLRAVGYGSDKPIADNKTKKGRKLNRRVELV 696
>gi|156072292|gb|ABU45468.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302327799|gb|ADL27000.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 700
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/178 (22%), Positives = 70/178 (39%), Gaps = 14/178 (7%)
Query: 17 GCG-LASREKKKVFLHK--SNDTDIVNKRFGSSLDKAEDEFQMQLQDT-----GIVVSRI 68
GC + ++ L K + + G +D +D L G+ V +
Sbjct: 520 GCSPDSDKDGIVDALDKCPNTPAGVSVDEVGCPVDSDKDGVADHLDKCPNTLVGVAVDKN 579
Query: 69 G-----DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
G + L L IA +L K P+ + +Q HTD G+
Sbjct: 580 GCPNKNQDLDKLKKGIQFKTGSAKLTASSNKTLNNIAKLLKKLPAVNLEVQGHTDDTGSE 639
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N +S++RA + YL+++ + + G+ PI N TK GR+ N+R+E+
Sbjct: 640 EKNKTMSEQRAQAVVKYLVKK-GIDSERLRAVGYGSDKPIADNKTKKGRKLNRRVELV 696
>gi|110636904|ref|YP_677111.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC
33406]
gi|110279585|gb|ABG57771.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC
33406]
Length = 620
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + + L + +L P+ I I HTD+IG N +S+ER
Sbjct: 512 IILRNIFFDSGKATIRLESTAELLKLVDLLKNNPTLRIEIAGHTDNIGDETLNQKLSEER 571
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + ++L G+S+ R + +G+ P+ N T GRQ N+R EI+I
Sbjct: 572 AKNVVTFLTANGISAGRLV-AKGYGSSQPVAPNTTDTGRQQNRRTEIKIL 620
>gi|302326566|gb|ADL25767.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 215
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 7/155 (4%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQ------LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ + + DK E LQ I V++ I + + V L+
Sbjct: 57 EAEKQAIKAQKDKLEASKNEAMDKLNALQSQMIQVTKDARGIILSMSDILFDVGRATLKT 116
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+ L IA IL+ + ++I+ +TD+ G+ + N+ +SQ+RA+ + +L+++ +
Sbjct: 117 DLMTSLAKIAGILSVYQQFDVSIEGNTDNTGSEEFNMTLSQQRAENVMKFLVEQ-GIAET 175
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ +G PI N TK GRQ N+R+++ I R
Sbjct: 176 RLTAKGLGMTMPIADNSTKEGRQKNRRVDLVITDR 210
>gi|114319403|ref|YP_741086.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114225797|gb|ABI55596.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 184
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 60/183 (32%), Gaps = 5/183 (2%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L ++ C + + + L++A
Sbjct: 1 MKQLQNWIALAIAGLFLAACATVTDVETDDRRVSDRERMADEDWSEQRLEEARARGLDP- 59
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
D I + + +P+++ A L+ P + I+ HTD
Sbjct: 60 SDPFISALMDDPEGPLSRQTVYFDFDRSEIRNEDMPVIEAHARFLSGHPDRRMTIEGHTD 119
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ + NL + + RA+ +K ++ + V + + P+ + Q N+R
Sbjct: 120 ERGSREYNLALGERRAEAVKRIMVLN-GVDEDQLEVTSYGEENPVALGSNEEAWQQNRRA 178
Query: 179 EIQ 181
E+
Sbjct: 179 ELI 181
>gi|298291600|ref|YP_003693539.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
gi|296928111|gb|ADH88920.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
Length = 336
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 46/109 (42%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I + ++ + + +A++L P + I HTD G NL +SQ
Sbjct: 221 RIAIYGIYFDFDKADIKPESEAQIAQLASLLKSNPQLGVLIVGHTDGHGAFDYNLSLSQR 280
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA + + L + + + G P+ +N T+ GR N+R+EI
Sbjct: 281 RAQAVANRLTSQHGIAANRTTPAGAGMIAPVASNRTEEGRAKNRRVEIV 329
>gi|171060845|ref|YP_001793194.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170778290|gb|ACB36429.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 229
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 5/165 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPV 78
+ + + + ++ + Q TGI V R + + IP
Sbjct: 62 ATGGKAGTGAVVGGAVGAVAGNLWSKRMEDKRKAMEAATQGTGIDVVRTTDNQLKVNIPA 121
Query: 79 HV-SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V ++ +P+L +A L + + + HTDS G+ N +S +RA+ +
Sbjct: 122 DFSFDVGRSAVKPVMVPVLDKLAQGL--DATVQVQVIGHTDSSGSDAVNNPLSLDRAEAV 179
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + R I V G + P+ N T GR N+R+EI +
Sbjct: 180 RD-YLSRHGVPAARIQVEGRGEREPVADNATPDGRAQNRRVEIFL 223
>gi|254517028|ref|ZP_05129086.1| flagellar motor protein [gamma proteobacterium NOR5-3]
gi|219674533|gb|EED30901.1| flagellar motor protein [gamma proteobacterium NOR5-3]
Length = 286
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ +K +D + + Q + V G IT I SF L F+P++Q I
Sbjct: 112 AETQADAEKLKDMLEDETQTGKVDVESDGRTITVRIREQGSFPSGSANLNTDFVPVMQRI 171
Query: 100 ATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + P T I+I+ HTDS G ++N +S RA + L++ G+ + + V
Sbjct: 172 RDALVEIPGT-ISIEGHTDSTPLRGGRYESNWGLSSSRALSVTHELLRDGLLKDDRMMVV 230
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
GFA P NDT GR +N+R+EI I
Sbjct: 231 GFADTRPFTFNDTVEGRASNRRVEIVI 257
>gi|254449210|ref|ZP_05062659.1| outer membrane protein [gamma proteobacterium HTCC5015]
gi|198261187|gb|EDY85483.1| outer membrane protein [gamma proteobacterium HTCC5015]
Length = 229
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 60/167 (35%), Gaps = 4/167 (2%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
CG+ + + K+ + I E Q + I
Sbjct: 55 CGMRANDSKRRIPTPVSKKPIDMDEVAKRKKAQEKAAAEQKAEEQKKALDSVRSINLS-S 113
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
L K L +A L + I HTDS G+ N +S++RA
Sbjct: 114 GAAFSTGSAKLSSKGKESLDDLAMKLKALGNGVKSVQIDGHTDSQGSESLNQRVSEQRAQ 173
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+KSYL+++ I+ +G+ P+ N T GR N+R+EI +
Sbjct: 174 AVKSYLVEQ-GVDGSLINTKGYGESQPVADNATAAGRAQNRRVEISV 219
>gi|300855151|ref|YP_003780135.1| putative flagellar motor protein MotB [Clostridium ljungdahlii DSM
13528]
gi|300435266|gb|ADK15033.1| predicted flagellar motor protein MotB [Clostridium ljungdahlii DSM
13528]
Length = 249
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 75/176 (42%), Gaps = 10/176 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDMITC 74
G ++ + + + K ++++ + +++ G + V D +
Sbjct: 67 GSSTNQFIETGESTDKPDESAGKTEQDTMNEIKKTLDAKIKQDGYDDKVKVEISKDGLGI 126
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLI 129
I + F + + P+L I+ ++ I I HTD++ ++N +
Sbjct: 127 SIQEAILFNSGDAEVLTHIHPLLISISEMIR-NLDNNIRIAGHTDNVPIHNSKFRSNWDL 185
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
S RA + +++++ G + +S++ ++ P TN TK GR N+R+EI I +
Sbjct: 186 SAMRAINVMNFMVKNGGINITKVSIQAYSEYQPKSTNLTKEGRAQNRRVEIFIVRK 241
>gi|222054510|ref|YP_002536872.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221563799|gb|ACM19771.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 287
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 10/170 (5%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV- 83
K ++ K + V K + D E + + ++ + +S + +T + V F
Sbjct: 120 KDEIANLKKAKEEEVQKTSKTYEDLLE-KMKSEISQGQVTISELKGKLTVNMVDAVLFDS 178
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-------LKNNLLISQERADV 136
+ ++ + L +LQ + IL I I+ HTD+ + N +S RA
Sbjct: 179 GKAEIKPEGLIVLQKVIDILKNIKDKSIRIEGHTDNDQIGGALAKKYQTNWELSAARAIN 238
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ +Q+ +S + P+ ND++ G+ N+RIEI + P+
Sbjct: 239 VTR-YLQQQGIDPLNLSAIAYGEFKPVAANDSREGKAKNRRIEIILVPKE 287
>gi|319651875|ref|ZP_08005999.1| hypothetical protein HMPREF1013_02611 [Bacillus sp. 2_A_57_CT2]
gi|317396434|gb|EFV77148.1| hypothetical protein HMPREF1013_02611 [Bacillus sp. 2_A_57_CT2]
Length = 246
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 57/166 (34%), Gaps = 6/166 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ ++ K N L + + + IV +R + + V
Sbjct: 68 AENPEQNEEIKENGDSGQLDSLDELLMEIQSFLDENGLEKVIVANRTERGVVLVLQEQVL 127
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADV 136
F + L L + T+L P+ + ++ HTD +N +S RA
Sbjct: 128 FESGDASLIDSSYSFLDKVGTLLANMPNL-VKVEGHTDDRPITTYRYPSNWELSAARAST 186
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL ++ + G+ PI N + N+R+EI I
Sbjct: 187 VIRYLTEKHNLDSHRFMAVGYGETRPIVPNSGPENWEKNRRVEIII 232
>gi|146337865|ref|YP_001202913.1| hypothetical protein BRADO0750 [Bradyrhizobium sp. ORS278]
gi|146190671|emb|CAL74675.1| hypothetical protein; putative Outer membrane protein containing
OmpA/MotB domain [Bradyrhizobium sp. ORS278]
Length = 429
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
++ + + ++ L+ + P+L +A ++ P I+ HTD++G N
Sbjct: 310 KLDKDCHLPLYGVLFDFNKASLKPESEPLLTKVAALVTARPDLNAEIEGHTDNVGGDDYN 369
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +S RA + + + + ++ G+ P+ N T GR N+R+EI
Sbjct: 370 MRLSDARAASV-RTWLTQHGVAAARLTSHGYGKTRPVADNGTDQGRALNRRVEIV 423
>gi|172058884|ref|YP_001815344.1| OmpA/MotB domain-containing protein [Exiguobacterium sibiricum
255-15]
gi|171991405|gb|ACB62327.1| OmpA/MotB domain protein [Exiguobacterium sibiricum 255-15]
Length = 257
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 77/184 (41%), Gaps = 8/184 (4%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGS---SLDKAEDEFQMQLQDTGIVVSRIGD 70
I+ L++ ++++ T + ++A D + Q + I V +
Sbjct: 62 MITNSSLSTSQEEEDSKKTDARTKAQSYEIAELEKIKEEANDYIKQQKLEKDIKVEVTNE 121
Query: 71 MITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKN 125
+ I F + ++ + + Q ++ +L K I + HTD+I +
Sbjct: 122 GLVFNIRDRALFSPAQADVKGDAIQIAQGMSNLLVKAGQRQIQVSGHTDNIPINTVQYPS 181
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S ERA L + + + +V G+ PI +NDT+ GR N+R+E+ I P
Sbjct: 182 NWELSAERAISFMRALQRNPKLTPKRFTVSGYGEYQPIASNDTESGRSQNRRVEVLIRPL 241
Query: 186 GNIK 189
+IK
Sbjct: 242 IDIK 245
>gi|153005701|ref|YP_001380026.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152029274|gb|ABS27042.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 256
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 71/176 (40%), Gaps = 12/176 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDK-------AEDEFQMQLQDTGIVVSRIGDMI 72
AS+++ + + + + + L+K + + ++ + ++ + +
Sbjct: 68 SASKQQLQSQVADLATSKTKLETVKAELEKKSSEYEKMANALRGEIDAGRVELTELRGKM 127
Query: 73 TCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG---TLKNNLL 128
T + + F L + L+ +A +L VI ++ HTD++ N
Sbjct: 128 TVKMKDKILFSSGSATLGRAGKDALRAVAEVLTGVEGKVIRVEGHTDNVPLGRGFATNWD 187
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S RA + +Q ++ G+ PI +NDT GR N+RIEI + P
Sbjct: 188 LSVARALAVVR-FLQESGVQPSRLAAAGYGEHQPIASNDTPEGRSQNRRIEIVLAP 242
>gi|327438679|dbj|BAK15044.1| flagellar motor protein [Solibacillus silvestris StLB046]
Length = 251
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 73/215 (33%), Gaps = 34/215 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHK------------------SNDTDIVNKRFGSS 46
L L + + + +K + +
Sbjct: 27 LTLLLALFIVLFASSSVDEKKLEQMSAVFTNIFTGGTGVMDNPAIIQTPDNSTPTGISKY 86
Query: 47 LDKAE----------DEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPM 95
++ E + + + + + I + F + ++ ++ +
Sbjct: 87 IEDQERLQETQNRVDEFIAINELEDQFETKMTDEGLLITIRDSILFDMGRADVKAEYDTI 146
Query: 96 LQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQERA-DVIKSYLIQRGVSSNR 150
+A +L P + I HTD+ +N +S RA + +K + ++
Sbjct: 147 ADELAQLLMFDPPRNVVITGHTDNVPIKTPEFDSNWDLSVMRAVNFMKEIVSGNEQLDSK 206
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ SV+GF PI TNDT+ GR N+R+E+ + PR
Sbjct: 207 YFSVKGFGEFQPIATNDTQEGRAKNRRVEVLVQPR 241
>gi|91216090|ref|ZP_01253058.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
700755]
gi|91185607|gb|EAS71982.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
700755]
Length = 319
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 41 KRFGSSLDKAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPML 96
+ ++ L + G+ V + + + F S + + +
Sbjct: 156 ADKEQKMISLKENLSRALTNFEGQGLSVELRDGKVYVSMENKLLFASGSWTVGGEGQKAV 215
Query: 97 QLIATILNKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ + +L P + I+ HTD+ G L +N +S +RA + L++ G + +
Sbjct: 216 KELGKVLADNPDIAVLIEGHTDNVPYGGNGPLTDNWDLSTKRATEVLKLLLKNGKINPQN 275
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ G P+ N T+ G+ N+RIE+ + P+
Sbjct: 276 LTAAGKGEFAPLVPNTTEEGKAKNRRIEVVLTPK 309
>gi|315635918|ref|ZP_07891180.1| outer membrane fibronectin-binding protein [Arcobacter butzleri
JV22]
gi|315479897|gb|EFU70568.1| outer membrane fibronectin-binding protein [Arcobacter butzleri
JV22]
Length = 338
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 65/165 (39%), Gaps = 8/165 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + V + D SLD+ + + G V IG M + +
Sbjct: 181 APVAEKPAPVATPVAAPKDSDGDGVIDSLDECPNTMK------GAKVDNIGCMTLVNLNI 234
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ ++ ++ + + A ++ P I++HTDS+GT N +S+ RA
Sbjct: 235 N-FDTAKADIKDSYNSRINEFAKVMKADPKLKANIEAHTDSVGTDAYNQKLSERRATSAV 293
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ L+ I G+ PI +NDT GR N+R+E +
Sbjct: 294 NALVAA-GVEKDRIKAVGYGESRPIASNDTVEGRAENRRVEAVMV 337
>gi|257125214|ref|YP_003163328.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
gi|257049153|gb|ACV38337.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
Length = 173
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 81/183 (44%), Gaps = 10/183 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K+ ++ + + +++ L + + G ++D +
Sbjct: 1 MEKKSKITAMLSVLLVSAPSTAKKITTSNLRNNAMKTTAVEIEGVNIDDL---------N 51
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
T + D+I + +++++ P+L+ + + + + I+I +TDS
Sbjct: 52 TKEDKIKENDIIVLDANALKFDFNSATIKEEYTPVLEKLKNYI-ESKNHKISITGYTDSK 110
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N +S RA+ ++ LI+ G++ + I +G PI +NDT+ GR N+RIEI
Sbjct: 111 GTKEYNRELSLRRAESVEEKLIELGLAPEKIIETKGNGDANPIASNDTEEGRSVNRRIEI 170
Query: 181 QIF 183
+
Sbjct: 171 KFM 173
>gi|183222022|ref|YP_001840018.1| hypothetical protein LEPBI_I2664 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912089|ref|YP_001963644.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167776765|gb|ABZ95066.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167780444|gb|ABZ98742.1| Putative outer membrane protein; putative signal peptide
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 618
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 50/112 (44%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ K+ P L +A IL K + + I+ HTD++GT N +S ER
Sbjct: 507 IVMNNLFFAFRSSEFAKESEPELDRLAGILKKTTNLKVLIEGHTDNVGTKSANQKLSLER 566
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
A+ + YL + + ISV G PI N ++ GR N+R+ +I
Sbjct: 567 ANSVAFYLKSKHKIEDSRISVVGLGPSNPIAENGSEEGRAVNRRVVFKILEE 618
>gi|293609865|ref|ZP_06692167.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828317|gb|EFF86680.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 188
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 8/180 (4%)
Query: 2 IKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
IK L L + ++GC +K + G S D A + L
Sbjct: 6 IKYLALPFLSVALVMTGCAS----RKPAATTTTGTNPSTVNTSGLSEDAALNA--QNLAG 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V L + LQ A L ++ +A+ HTD
Sbjct: 60 ASSKGVTEANKAALAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSKVALTGHTDER 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA ++SYLI + + + + + P++ + + N+R+EI
Sbjct: 120 GTREYNMALGERRAKAVQSYLITN-GVNPQQLEAVSYGKEAPVNAGHDESAWKENRRVEI 178
>gi|262371451|ref|ZP_06064767.1| outer membrane protein A precursor [Acinetobacter johnsonii SH046]
gi|262313590|gb|EEY94641.1| outer membrane protein A precursor [Acinetobacter johnsonii SH046]
Length = 159
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 31/187 (16%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K + L ++T +SGC K
Sbjct: 1 MLKHLCKFMLIAGLITALSGCLSLGHLNYKQAR--------------------------M 34
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L+ G ++ G + + + ++ P L+ ++ L ++ I + HT
Sbjct: 35 LKKQGFTLTEEGWTLRLP-EKLLFGFDQSDIQASQKPALEALSKQLQQYNLNKIKVVGHT 93
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+IG N +S++RA + I+ + I G P+ N ++ R N+R
Sbjct: 94 DNIGDPSYNQTLSEKRASTVSQIFIE-TGFKTQNIQSMGRGASQPLVENSSEENRALNRR 152
Query: 178 IEIQIFP 184
+ I I P
Sbjct: 153 VNIIIIP 159
>gi|127513695|ref|YP_001094892.1| flagellar motor protein MotB [Shewanella loihica PV-4]
gi|126638990|gb|ABO24633.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 314
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 8/180 (4%)
Query: 17 GCGLASRE-KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
A E + + + + K E ++ D I + +G I
Sbjct: 129 ASSTAQEEADSEAQAKQQQQEAASQDQINDRVKKMAQELNKEIVDGAIEIESLGQQIIIR 188
Query: 76 IPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLIS 130
I +F S FL+ +F P+++ + +L P I + HTD + +N +S
Sbjct: 189 IREKGAFSSGSGFLQPRFKPVIRRVGELLKDVPGI-ITVSGHTDDMNISNELYSSNWDLS 247
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+RA + L++ + + V G A P+ ND+ R N+R+EI I +G K+
Sbjct: 248 SKRAVAVAHELVRVPGFDQQRMKVVGMASTAPLVPNDSAANRARNRRVEIAI-EQGKPKE 306
>gi|307718829|ref|YP_003874361.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
gi|306532554|gb|ADN02088.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
Length = 414
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
V + + I + + L L L+A LN P I + HT
Sbjct: 290 GEENSVEEVPEGIKITLRTLHFLPDQAVLLPGEEEKLDLLAEALNAIPDRTILVVGHTAD 349
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+G + + +S+ RA I L++RGV R I G P+ NDT+ GR+ N+R+E
Sbjct: 350 VGKPRGQMALSEARAKTIVEELVKRGVKPERLIY-LGKGGTEPVAPNDTEEGRRLNRRVE 408
Query: 180 IQIF 183
I +
Sbjct: 409 IFVL 412
>gi|292492681|ref|YP_003528120.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
gi|291581276|gb|ADE15733.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
Length = 282
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLP 94
++ + + + + ++ Q ++ IV+ RIG+ I I SF + F P
Sbjct: 112 SEARIRDTEAKVAELQNMLQNEIDQGLIVLERIGEQIIIRIQEKGSFPSGSASFNQDFKP 171
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNR 150
+L + T+LN+ I + HTD + ++N +S RA + +L + +
Sbjct: 172 VLDKLRTVLNRIEG-KIVVAGHTDDLPIHTSRFRSNWELSTARAVSVIHHLFATDEIAPQ 230
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ G A P+ NDT R +N+RIEI I P
Sbjct: 231 RFVIEGHADTQPLAPNDTAENRVHNRRIEITIMP 264
>gi|85709715|ref|ZP_01040780.1| outer membrane protein [Erythrobacter sp. NAP1]
gi|85688425|gb|EAQ28429.1| outer membrane protein [Erythrobacter sp. NAP1]
Length = 231
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 83/220 (37%), Gaps = 37/220 (16%)
Query: 1 MIK-ELGLSMFIMTTISGCGL--ASREKKKVFLHKSNDTDIVNK---------------- 41
M K + LS + G + + ++ V
Sbjct: 1 MKKSRILLSATAAVALLGTSACVTDPNTGERKVSRTAIGAGVGGTLGYLLGGVIGGNTAR 60
Query: 42 ------------RFGSSLDKAEDEFQMQLQDTGIVVSRIGDM--ITCYIPVHVSF-VSEV 86
G D E +L+ TG+ V IGD I +P V+F
Sbjct: 61 IIGAGIGGSAGAVVGKQFDDQIRELDEELEGTGVDVEEIGDQDAILVRLPDGVTFASGSA 120
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ F L +A L ++P++++ + TD+ G+ N +S++RA + YL RGV
Sbjct: 121 TINPGFYDSLNSVANSLIQYPNSLVDVYGFTDTTGSDSLNQRLSEQRAQAVADYLASRGV 180
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQ--NNQRIEIQIFP 184
+ +R ++ RG+ Y T G N+R+EI+I P
Sbjct: 181 ARSR-LATRGYGESYDYLRIKTADGVAEPLNRRVEIKIIP 219
>gi|28868712|ref|NP_791331.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213969090|ref|ZP_03397229.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
gi|301384017|ref|ZP_07232435.1| ompA family protein [Pseudomonas syringae pv. tomato Max13]
gi|302058723|ref|ZP_07250264.1| ompA family protein [Pseudomonas syringae pv. tomato K40]
gi|302131685|ref|ZP_07257675.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28851951|gb|AAO55026.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213926088|gb|EEB59644.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
gi|331016335|gb|EGH96391.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 260
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 73/180 (40%), Gaps = 13/180 (7%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYI 76
+ ++ ++ +S D+A+ + + + +
Sbjct: 82 TNQRVELAKQTIALRTSEAALQNASADRAKARLEARDAQIAALKNSLNAKQTERGTLVTF 141
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ L+ + +A L + + ++ +TDS G+ N +S+ RA+
Sbjct: 142 GDVLFDYNKAELKPTAQGDIGKLAAFLQENTDRKVIVEGYTDSTGSASYNQSLSERRANS 201
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-------PRGNIK 189
++ L++ GV R ++ G+ +YP+ N + GR N+R+E+ I PR ++K
Sbjct: 202 VRMALVRMGVDPARVVT-MGYGKEYPVADNSSNSGRAMNRRVEVTISNDNQPVAPRSSMK 260
>gi|312959441|ref|ZP_07773958.1| OmpA/MotB [Pseudomonas fluorescens WH6]
gi|311286158|gb|EFQ64722.1| OmpA/MotB [Pseudomonas fluorescens WH6]
Length = 231
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/227 (19%), Positives = 69/227 (30%), Gaps = 45/227 (19%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKV-FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+++ + + ++GC + + S+ +
Sbjct: 3 IMRTALPLVLLTGVLTGCAGLQKTDWPTCAAVGGVTGAAIGATESSAYAGYGALIVGGMA 62
Query: 60 DT---------------------------GIVVSRIG----------------DMITCYI 76
G+ V G T I
Sbjct: 63 GAYCWVHGDGDEDGDGVPDSRDKCPGTPKGMQVDANGCPPAPPAAAVEEMAVVKEETIVI 122
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
L L IA L + PS + + HTDS+G N +SQ+RA
Sbjct: 123 RDVHFQFDSANLTTADKTTLDTIAARLKQEAPSAQLRVSGHTDSVGADAYNQKLSQKRAH 182
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YLI RGV + F+SV G P+ N T GR N+R +IQI
Sbjct: 183 SVTEYLISRGVPRSSFVSVVGAGESQPVADNKTAEGRALNRRTQIQI 229
>gi|197124193|ref|YP_002136144.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|196174042|gb|ACG75015.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
Length = 543
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 5/166 (3%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C K +D D V DK + I
Sbjct: 377 CPSVPGATDNQGCPKDSDKDGVPDDKDRCPDKPGIPENQGCPPERAEIKAGKIEIK---E 433
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ + +L +A ++ P V+ I+ HTDS G+ N +SQ+RA+
Sbjct: 434 KVYFDTGKATIKAQSNALLDDVAKLIAANPQVGVVTIEGHTDSTGSAATNRALSQKRAEA 493
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+K YL+ +GV ++R + +GF P+++N T GR+ N+R+E I
Sbjct: 494 VKDYLVSKGVDASR-LEAKGFGPDQPVESNKTAKGREANRRVEFTI 538
>gi|291276673|ref|YP_003516445.1| peptidoglycan associated lipoprotein [Helicobacter mustelae 12198]
gi|290963867|emb|CBG39703.1| peptidoglycan associated lipoprotein (omp18) [Helicobacter mustelae
12198]
Length = 169
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 74/182 (40%), Gaps = 17/182 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ +F++ + GC KK+V + ++ + ++ KA + + +
Sbjct: 1 MKKVFFLIFLVLFVVGCA-----KKEVAIDEAPKVQQEEEPVQENVAKAPEPKKKDILQD 55
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G VV + + ++ +N+ P + ++ +TD G
Sbjct: 56 GTVV-----------GSVYFAYDQYNIPPSMSDVIDSSVEKINENPDMNVVVEGNTDEFG 104
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + N +S +RA ++S LI R S IS+ P+ T + Q N+R +I+
Sbjct: 105 SDEYNFALSNKRAMAVQSALITR-GISKNKISILSLGKTKPVCTEKREECYQKNRRGDIR 163
Query: 182 IF 183
+
Sbjct: 164 LI 165
>gi|258625264|ref|ZP_05720172.1| outer membrane protein OmpA [Vibrio mimicus VM603]
gi|258582437|gb|EEW07278.1| outer membrane protein OmpA [Vibrio mimicus VM603]
Length = 328
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 2/144 (1%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY-IPVHVSFVSEVFLEKKFLPMLQL 98
+++++ E ++ + + T + + L+ L
Sbjct: 177 GSEAPAAVEQRPAEPAPVAEEPVVEKVAVTKTFTFQHLDSGTFANNSAELKPSMETKLDK 236
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ LN++P + + HTDS G+ N +S++RA + L +GV + R I+ +G
Sbjct: 237 LVGYLNQYPQAKVEVVGHTDSNGSEAYNQKLSEKRAQAVAKALEAQGVDAAR-ITAKGQD 295
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
PI +N T GR+ N+R+E+ I
Sbjct: 296 ESNPIASNATAEGREKNRRVELVI 319
>gi|51702435|gb|AAU08790.1| OmpA [Bordetella ansorpii]
Length = 178
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + +L +A+ +N + HTDSIG+ N +S+ RA +
Sbjct: 70 DTFFDFDKSTLKPEGRQLLDQVASQVNTINLETLIAVGHTDSIGSDAYNQKLSERRAASV 129
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
KSYL+ + I G K P+ +N T+ GR N+R+EI+I
Sbjct: 130 KSYLVSK-GIDANRIYTEGKGEKQPVASNSTREGRAKNRRVEIEIV 174
>gi|108756980|ref|YP_628607.1| OmpA family protein [Myxococcus xanthus DK 1622]
gi|108460860|gb|ABF86045.1| OmpA family protein [Myxococcus xanthus DK 1622]
Length = 409
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 4/148 (2%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQL 98
R + E Q++ + V + + V F S L L
Sbjct: 247 QARLDAEQRATEALTQLESTARDVKVREEERGLVLTMSGQVLFASNAVDLLPTAREQLTE 306
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A L + + I+ HTDS+G+ N +S RA+ ++ +LI +GVS +R I VRG
Sbjct: 307 VAHALK-VSDSPMVIEGHTDSMGSDAMNEALSYRRAEHVREFLISQGVSRDR-IQVRGLG 364
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
P+ N T GR NN+R+EI I PRG
Sbjct: 365 EYRPVANNSTPEGRANNRRVEI-ILPRG 391
>gi|293603504|ref|ZP_06685926.1| OmpA family protein [Achromobacter piechaudii ATCC 43553]
gi|292818090|gb|EFF77149.1| OmpA family protein [Achromobacter piechaudii ATCC 43553]
Length = 210
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 43 FGSSLDKAEDEFQMQLQDT-GIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
G + +D+ Q + GI V + D + IP V + L+ LP+L +
Sbjct: 64 VGYNWKVVKDDVQQSGASSLGIDVVEMPDGSLKVNIPSGVSFDTDKTQLKPALLPVLDSV 123
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A LN+ P + HTDS G L +N +S RA + + + + +++ G
Sbjct: 124 ARSLNQHPELRAKVVGHTDSTGALAHNQTLSVNRARSVTD-YLAKQGVAATRLAIEGRGP 182
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
PI N T GR N+R+EI +
Sbjct: 183 SDPIGDNATAEGRALNRRVEIYL 205
>gi|163738854|ref|ZP_02146267.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
gi|163741898|ref|ZP_02149288.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
gi|161385071|gb|EDQ09450.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
gi|161387659|gb|EDQ12015.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
Length = 636
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 13/181 (7%)
Query: 12 MTTISGCGLASREKKK-----VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
++SG + ++ +N + + + A+ +L + +
Sbjct: 432 SLSLSGMSHREDAPSEIAKLLSAKLGDAESYELNVTYEAPPEPADKPMSPELCEAELAAV 491
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ IT + L IA IL + + IQ HTDS G + N
Sbjct: 492 QTVSKIT-------FEPGSATVAAGSRDTLDQIADILARCDGVRLEIQGHTDSQGREEMN 544
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+SQ RA + + L R + ++ + +G+ PI +NDT+ GR+ N+RIE ++
Sbjct: 545 QTLSQSRAQSVLNELRGRRLVTSS-FTAKGYGESTPIASNDTEDGREANRRIEFRLIRPA 603
Query: 187 N 187
N
Sbjct: 604 N 604
>gi|34763583|ref|ZP_00144517.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27886747|gb|EAA23886.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 157
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ +L+ I + + + I I HTDSIG+ N +S+
Sbjct: 29 IVLDERSLHFDFDKSNVKPQYYDLLKNIQEFVEQN-NYEITIVGHTDSIGSNAYNFKLSR 87
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA+ +K+ L++ G+S +R + + + PI TN TK GR N+R+E ++ R ++
Sbjct: 88 RRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRETVQ 145
>gi|325982315|ref|YP_004294717.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
gi|325531834|gb|ADZ26555.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
Length = 277
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 72/170 (42%), Gaps = 3/170 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
A E+ ++ L +K+ + + Q +L++ + + + +
Sbjct: 106 ANADVERDRILLEARTAEAEESKQQVAFDQLLIAQQQKELEE--LNAKKTERGLVITLND 163
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + LE + +Q +A L ++ + I+ HTD+ G+ N +S+ RA+ +
Sbjct: 164 VLFRTNMAQLEANGVRTVQKLADFLRQYTQHKVLIEGHTDNTGSHHYNQELSERRANAV- 222
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ SN ++ RG+ PI NDT RQ N+R+EI + +
Sbjct: 223 KMALLNSGISNDRVASRGYGETLPIAGNDTAEHRQLNRRVEIILSDENGV 272
>gi|152971688|ref|YP_001336797.1| hypothetical protein KPN_03169 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150956537|gb|ABR78567.1| hypothetical protein KPN_03169 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 567
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 53/108 (49%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ V + L+ +L + P +I + +TD+ G K N +S RA+ ++
Sbjct: 434 LFDVGQARLKDGSTKVLINALVNIRARPGWLIVVTGYTDTTGNKKANQQLSLRRAEAVRD 493
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++Q F +V+G +P TNDT GR N+R+EI + PR +
Sbjct: 494 WMLQTSDIPATFFAVQGLGESHPAATNDTPEGRAANRRVEISLVPRTD 541
>gi|54308004|ref|YP_129024.1| flagellar motor protein MotB [Photobacterium profundum SS9]
gi|46912430|emb|CAG19222.1| putative sodium-driven polar flagellar protein MotB [Photobacterium
profundum SS9]
Length = 310
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+G + N+ +++ L+ + ++QD I V G +
Sbjct: 119 AGKLTGGKSADVATQMNQNNQSEMSESQEQLLEVMQKALDREIQDGAIEVENFGQQVVIR 178
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLIS 130
I +F FL+ KF P+++ IA ++ P I I HTD+ ++N +S
Sbjct: 179 IKEKGAFPAGSAFLQPKFRPLVRQIADLVKDVPGI-IRISGHTDNQKLDSELYRSNWDLS 237
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA + + Q ++ + V G A P+++N T R+ N+R+EI I
Sbjct: 238 AQRAVSVAQEMEQVKGFDHKRLRVVGLADTAPLNSNKTAEERKVNRRVEISIM 290
>gi|284035678|ref|YP_003385608.1| V-type H(+)-translocating pyrophosphatase [Spirosoma linguale DSM
74]
gi|283814971|gb|ADB36809.1| V-type H(+)-translocating pyrophosphatase [Spirosoma linguale DSM
74]
Length = 890
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 60/137 (43%), Gaps = 5/137 (3%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
K E++ + + + L+ + L +A IL +P+
Sbjct: 759 KIEEQLIEFINSDKA----VDKETWFDFDRLTFETGKATLKPESQVQLGNVAQILKAYPN 814
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ + +TD+ G NL +S ERA +++ +++ + G+ ++P+ +NDT
Sbjct: 815 VNVKVGGYTDNTGNANANLKLSGERASSVEAE-LEKLGIDKSRLEAEGYGQEHPVASNDT 873
Query: 169 KVGRQNNQRIEIQIFPR 185
+ GR N+RI +++ +
Sbjct: 874 EEGRAQNRRISMRVTKK 890
>gi|319794434|ref|YP_004156074.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315596897|gb|ADU37963.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 331
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + + + + + P L + ++ P +++ HTD+ G K+N +S+
Sbjct: 222 RINLYGILFDLDKDVIRPESQPTLDEMTKLMRNNPPLKLSVVGHTDAQGEAKHNDDLSKR 281
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA + ++ + R + RG P+ ND + GR N+R+E+
Sbjct: 282 RAVAVI-GVLVKAGVDPRRFTTRGAGAAEPVAPNDNEAGRAKNRRVELV 329
>gi|108763506|ref|YP_633737.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108467386|gb|ABF92571.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 2699
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 67/174 (38%), Gaps = 9/174 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC ++ + + + D+ + V G+ I +
Sbjct: 2528 GCPDPDNDRDGIPDAEDK-CPNEPETINGFQDE-----DGCPDKGKVKVLVDGERIVI-L 2580
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERAD 135
+ + + P+L+ +A +L P + I+ HTD G NL +SQ RA+
Sbjct: 2581 EKVYFATGKDVILARSHPLLKQVAAVLRANPQVELVRIEGHTDDQGNDAKNLDLSQRRAN 2640
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + + + + G+ P+DTN T GR+NN+R+ I G ++
Sbjct: 2641 NV-RAFLVKEGIAEGRMEAVGYGETKPVDTNKTAKGRENNRRVGFTILRVGKVE 2693
>gi|269139917|ref|YP_003296618.1| peptidoglycan-associated outer membrane lipoprotein [Edwardsiella
tarda EIB202]
gi|267985578|gb|ACY85407.1| peptidoglycan-associated outer membrane lipoprotein [Edwardsiella
tarda EIB202]
gi|304559752|gb|ADM42416.1| Peptidoglycan-associated lipoprotein precursor; Outer membrane
protein P6; OmpA/MotB precursor [Edwardsiella tarda
FL6-60]
Length = 170
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 60/181 (33%), Gaps = 17/181 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L + IM ++ C + N S D+ +LQ
Sbjct: 6 VLKGLMLVLPIM-AVAACSSKKNTNDDQSGMGMGANGMENSSSNLSSDEQARLQMQELQK 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + + ++ L A L PS + ++ HTD
Sbjct: 65 NNI---------------VYFGLDKYDVTPDYMQELDAHAAFLRSNPSYKVTVEGHTDER 109
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S I + + + P + N+R +
Sbjct: 110 GTPEYNIALGERRANAV-KMYLQGKGVSADQIDIVSYGKEKPAVLGHDEAAYAKNRRAVL 168
Query: 181 Q 181
Sbjct: 169 V 169
>gi|260426127|ref|ZP_05780106.1| OmpA domain protein [Citreicella sp. SE45]
gi|260420619|gb|EEX13870.1| OmpA domain protein [Citreicella sp. SE45]
Length = 649
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 67/182 (36%), Gaps = 8/182 (4%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM 71
M T+SG + D + + ++ E +
Sbjct: 433 MVTVSG---NTGSTDANAEISGLLADKLGQGAEFEINVLYQEKLDPTLGIPTPDECEAQI 489
Query: 72 ITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ + L+ ++ IA +L + IQ HTDS G N +S
Sbjct: 490 VEIVGDRKINFEPGSANLDASAKDVMDDIAELLKLCGDIPLEIQGHTDSQGRESMNQQLS 549
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF---PRGN 187
Q+RA + L R V + + VRG+ + PI N T+ GR+ N+RIE ++ P
Sbjct: 550 QDRAQAVLDALRNRRVLTASY-RVRGYGEEQPIADNKTEEGREANRRIEFRLIRPEPTEE 608
Query: 188 IK 189
+K
Sbjct: 609 VK 610
>gi|326801229|ref|YP_004319048.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326551993|gb|ADZ80378.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 177
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 64/184 (34%), Gaps = 13/184 (7%)
Query: 1 MIKELGLSMFIMTTIS--GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ K + + +S C + + ++ + K
Sbjct: 3 IKKTYPFVILLAVFVSMQACKSKKMAVQPNAVVETVKKEEPVKEKEPE----------PA 52
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + + L+ +L I + K PS I H
Sbjct: 53 PVEEKEEEPVVEKPNYNFKNILFEFDSGVLKTASYSVLDQIVREMKKDPSVKFTINGHAS 112
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ ++N+ +S +RA+ + + S ++ +GF P+ TN+T+ GR N+R+
Sbjct: 113 LEGSAEHNMALSVDRANAV-KLYLVNAGISPDNLTAQGFGATKPVATNETEEGRSQNRRV 171
Query: 179 EIQI 182
EI++
Sbjct: 172 EIKL 175
>gi|153931184|ref|YP_001384895.1| chemotaxis motB protein [Clostridium botulinum A str. ATCC 19397]
gi|152927228|gb|ABS32728.1| chemotaxis protein MotB [Clostridium botulinum A str. ATCC 19397]
Length = 420
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 10/181 (5%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDM 71
SG + K + +T + + GS E + + V G
Sbjct: 63 SGDSIVDYNMKNGDIPLVGETTKLGRETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRG 122
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNN 126
I + +V F ++ + ++ I ++ P+ + I+ HTD++ +N
Sbjct: 123 IIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPN-EVIIEGHTDNVPIKNEVYGSN 181
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S RA + Y ++ + + G+ PI N++ R N+R+ I I +
Sbjct: 182 WELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRAKNRRVNIVIVSKE 241
Query: 187 N 187
Sbjct: 242 K 242
>gi|56476929|ref|YP_158518.1| outer membrane protein, porin-associated lipoprotein [Aromatoleum
aromaticum EbN1]
gi|56312972|emb|CAI07617.1| Outer membrane protein, porin-associated lipoprotein [Aromatoleum
aromaticum EbN1]
Length = 175
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 67/177 (37%), Gaps = 12/177 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASR-EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K+ L ++T ++ C ++ + T ++ +
Sbjct: 1 MKKFVLPALLVTLLAACSSTGTFDQAGGTAVEDRSTGAPGVATVTA---------PSMAG 51
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+GI + I + ++ + P+++ A L + P + IQ +TD +
Sbjct: 52 SGIAALTDPNNI-LSKRSVFFDFDQFVIKPEARPLVEAHARFLVQNPQMKMLIQGNTDEL 110
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ + NL + Q+RAD ++ L G ++ SV + P ++ N+R
Sbjct: 111 GSREYNLALGQKRADAVRQALTLLGAKESQIESVS-LGEEKPRCGESSESCFAQNRR 166
>gi|148266090|ref|YP_001232796.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146399590|gb|ABQ28223.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 258
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 6/173 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
K + + K F + E + V + +
Sbjct: 84 QTLPPKQAQYGKTRSHAEEKDFKAIKAAIEAYLLKNDAQNKVSVEITRRGLVVSLKEVGF 143
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADV 136
F +++ +L +A ++ + + I ++ HTD++ + N +S RA
Sbjct: 144 FDSGSATVQQNSYGLLAHVAESVSNYTN-PIRVEGHTDNVPISSHTFPSNWELSTARATN 202
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ YLI+ IS GF PI N T GR N+R++I + + +
Sbjct: 203 LVQYLIRYYEFQPDKISATGFGEHRPIADNSTAEGRGKNRRVDIVLLSTESER 255
>gi|162452747|ref|YP_001615114.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161163329|emb|CAN94634.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 386
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 11/165 (6%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC ++ V + + G + + + + I +++
Sbjct: 227 GCPEPDNDQDTVVDLEDQCPNEPGVVGGDKPGCPKKPSLVIVTEKEIKITQQ-------- 278
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + + P+L + +L + P I IQ HTD+ G N +S RA
Sbjct: 279 --IHFEFDKDKIRPESFPILDAVVDVLQQNPKIKIEIQGHTDNKGAAAYNKKLSDRRAAS 336
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+K YL+ +G+ R ++ +G+ + PI N + R N+R++
Sbjct: 337 VKKYLVAKGIDEAR-LTSKGYGMEQPIVPNTSDQNRALNRRVQFV 380
>gi|256425427|ref|YP_003126080.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256040335|gb|ACU63879.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 285
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 5/133 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L D I + ++ I + F + K +L +A +L P ++ H
Sbjct: 141 LDDKDINIKVEKGVVYIDISDKMLFESGSYDVTPKAKEVLGKVAKVLLNQPDIEFMVEGH 200
Query: 117 TDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TDS K +N +S +RA + L I+ G + PI +NDT GR
Sbjct: 201 TDSNPYKKGVLLDNWDLSVKRATAVTRVLQNDYNIPPAHITAAGRSEYLPIASNDTPEGR 260
Query: 173 QNNQRIEIQIFPR 185
N+R I I P+
Sbjct: 261 ATNRRTRIVILPQ 273
>gi|192359273|ref|YP_001981784.1| outer membrane protein A [Cellvibrio japonicus Ueda107]
gi|190685438|gb|ACE83116.1| outer membrane protein A [Cellvibrio japonicus Ueda107]
Length = 344
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V+ +I + + ++ + +Q + +L + PS + + HTDS G+ +
Sbjct: 221 VTEQRIVIDENLGGALFEFNKSEIRNTA--AIQPVIDVLLEDPSLYVNVIGHTDSKGSEE 278
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +SQ RA+V+ YL +GVS +R I V G P+ N T+ GR N+R+E I
Sbjct: 279 YNQRLSQTRANVVAKYLNSKGVSLSR-IKVFGMGEDQPVADNSTEEGRAQNRRVEFIISN 337
Query: 185 RGNI 188
I
Sbjct: 338 SQQI 341
>gi|187251173|ref|YP_001875655.1| peptidoglycan-associated (lipo)protein [Elusimicrobium minutum
Pei191]
gi|186971333|gb|ACC98318.1| peptidoglycan-associated (lipo)protein-like outer membrane protein
[Elusimicrobium minutum Pei191]
Length = 189
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFP 107
K E + + V + G + F + L+ + L+ +A +L P
Sbjct: 53 KPEPKNLSEEVSGYASVRQAGTKQVVTFTTPILFETNSDKLKTESYDPLKKVAVVLKARP 112
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ ++ +TDS+G N+++S++RA+ +++ L++ + ++ +G+ PI N
Sbjct: 113 NMQTEVKGYTDSLGDPAYNVVLSEKRANSVRNVLVEN-GVNEANVTAKGYGAADPIADNK 171
Query: 168 TKVGRQNNQRIEIQIFPR 185
TK GR N+R+E+ I +
Sbjct: 172 TKEGRAKNRRVELDITNK 189
>gi|257458255|ref|ZP_05623405.1| OmpA family protein [Treponema vincentii ATCC 35580]
gi|257444365|gb|EEV19458.1| OmpA family protein [Treponema vincentii ATCC 35580]
Length = 436
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF-PSTVIAIQSHTDS 119
I V ++I + + L +IA L K P+T I+ HT +
Sbjct: 312 ESITVKAPKNIIKITMYDIRFVADSAEILPDETGRLDVIAEALKKVGPNTHFLIEGHTAN 371
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ + ++S +RAD I L +RG+ ++R + G+ PI NDT R N+R+E
Sbjct: 372 LNRPEGERILSLQRADKIAEELAKRGIEASRMETA-GYGATRPIAPNDTAENRAKNRRVE 430
Query: 180 IQIF 183
I I
Sbjct: 431 ITIL 434
>gi|153004024|ref|YP_001378349.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152027597|gb|ABS25365.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 506
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 66/174 (37%), Gaps = 14/174 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + ++ + +R G + + E V + ++
Sbjct: 346 GCPDSDADEIPDPQDRCPAEPGPPQRDGCPVAEEEPL-----------VEIETERLSLK- 393
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERAD 135
L + P+L I+ IL P + ++ HTD +GT N +S RA
Sbjct: 394 DAIQFDTGRDTLRSQSFPVLDAISGILAAHPELRRVRVEGHTDDVGTNAYNKDLSDRRAR 453
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ YL +G+ R + G+ + PI N + +GR N+R+E I + +
Sbjct: 454 TVVRYLAGKGIVPGRLVPA-GYGEERPIAPNTSALGRAKNRRVEFTIVDGADAR 506
>gi|85715944|ref|ZP_01046921.1| hypothetical protein NB311A_14045 [Nitrobacter sp. Nb-311A]
gi|85697142|gb|EAQ35023.1| hypothetical protein NB311A_14045 [Nitrobacter sp. Nb-311A]
Length = 314
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 61/131 (46%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
D Q ++ D + +G+ + + ++ + P L IA +L+ P
Sbjct: 182 RDAMQNKMIDAAAMAKGLGESGHIALYGIYFDTDKAVIKPESRPTLDQIAKLLSGQPGFN 241
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ I HTDS GT +NL +S+ RA+ + L++ + ++ G + P+ +N T
Sbjct: 242 VYIVGHTDSQGTPAHNLELSRRRAEAVAEDLVRTYKIAKARLNTAGVGFLAPVGSNGTDA 301
Query: 171 GRQNNQRIEIQ 181
GR N+R+E+
Sbjct: 302 GRALNRRVELV 312
>gi|327404103|ref|YP_004344941.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327319611|gb|AEA44103.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 293
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 12/159 (7%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGI-------VVSRIGDMITCYIPVHVSFVSEVF-LEK 90
+ + D+ + L+D + + + + + F S +E
Sbjct: 122 EMQAIIARQDELTKKLNQTLRDALVGFNSDELTMEIRDGKVYVSMSDKLLFKSGSTGVEP 181
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGV 146
K + L+++A +LNK P I ++ HTD++ K+N +S RA I L ++
Sbjct: 182 KGVEALKVLADVLNKNPDIQILVEGHTDNVPIKTAVFKDNWDLSVARATSITRMLNEKYA 241
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ ++ G +P +NDT G+ N+R EI + P+
Sbjct: 242 VAATRMTASGRGEYFPKASNDTTEGKAKNRRTEIILSPK 280
>gi|78062443|ref|YP_372351.1| hypothetical protein Bcep18194_B1593 [Burkholderia sp. 383]
gi|77970328|gb|ABB11707.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 440
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 56/136 (41%), Gaps = 7/136 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V D + F + +++P+L +A LNK P +
Sbjct: 291 LEPEIAAGLVSVRDDADRSVIVLRGDGLFKSGSTSVIDRYVPVLARVADALNKVPG-NVR 349
Query: 113 IQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ +TD +N +S+ERA+ + +I + ++ G P+ ND+
Sbjct: 350 VTGYTDDTPVHTARFASNWDLSRERAEAV-RGMIAARLDHPERLAAEGRGTLDPVAPNDS 408
Query: 169 KVGRQNNQRIEIQIFP 184
R N+R+EI + P
Sbjct: 409 PANRALNRRVEITLLP 424
>gi|83941418|ref|ZP_00953880.1| OmpA domain protein [Sulfitobacter sp. EE-36]
gi|83847238|gb|EAP85113.1| OmpA domain protein [Sulfitobacter sp. EE-36]
Length = 632
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 2/170 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + + + + A E + ++
Sbjct: 435 AGNTGNPDASTQIATLLAGKLGEGKDYEVKVAYQEKLDPVLGLPTPQECEAEIGKVVAKG 494
Query: 79 HV-SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ L + IA IL + +Q +TDS G + NL +SQ RA +
Sbjct: 495 KINFEPGSATIDASALGTMDQIAEILQDCRDIALEVQGYTDSQGREEMNLALSQSRAQSV 554
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ L R V + F+ +G+ + P+ +NDT+ GR+ N+RIE ++ G
Sbjct: 555 LNELRARRVITGSFV-AKGYGEESPVASNDTEEGREANRRIEFKLINEGT 603
>gi|256425383|ref|YP_003126036.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256040291|gb|ACU63835.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 449
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 4/165 (2%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
A + + K T K GS + +D Q+ T + ++ +
Sbjct: 287 ADADSDGVSDYFDKCPGTAAGTKVDGSGCELPKDTMPKQVI-TKVTITEDDRRLIKDAIQ 345
Query: 79 HVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ F + ++ P L +A +L + + HTD++G N+ +S++RA+ +
Sbjct: 346 NLEFEFAKSSIKASSYPSLDRVAEMLRT-KGFSLKLGGHTDNVGNATKNMALSKDRAESV 404
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K YL++ ++ I G+ PI +N T GRQ N+R+E I
Sbjct: 405 KQYLVE-HGANPSKIEAVGYGANQPIASNKTAAGRQKNRRVEFTI 448
>gi|310781368|gb|ADP24154.1| outer membrane protein A [Bordetella avium]
gi|310781370|gb|ADP24155.1| outer membrane protein A [Bordetella avium]
Length = 198
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ + +L +A + + HTDSIG N +S+ RA+ +
Sbjct: 90 DTFFDFDKSTIKPEGRQVLDQVADTVQSIDLETLIATGHTDSIGAEAYNQKLSERRANAV 149
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ +GV ++R I G P+ +N T+ GR N+R+EI+I
Sbjct: 150 KAYLVNKGVPADR-IYTEGKGEAQPVASNKTREGRAQNRRVEIEIV 194
>gi|261416280|ref|YP_003249963.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372736|gb|ACX75481.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 485
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 5/142 (3%)
Query: 49 KAEDEFQMQLQDTGIVVS-RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + D G + + + + L + I+ FP
Sbjct: 348 EQAESLNNYKDDDGCPDEVPQPPKKVFVLEGVNFESGKSTITQDSYISLMKVVDIMETFP 407
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I HTD+IG N+ +S +RA+ +K++L+++G++ +R + +G P+ +N
Sbjct: 408 EATFEIVGHTDNIGNKDKNMTLSADRANAVKNFLVEKGIAESRM-TTQGMGDTKPVASNK 466
Query: 168 TKVGRQNNQRIEIQIFPRGNIK 189
T GR N+RIE R +IK
Sbjct: 467 TPEGRAQNRRIEFI---RTDIK 485
>gi|187251342|ref|YP_001875824.1| outer membrane protein [Elusimicrobium minutum Pei191]
gi|186971502|gb|ACC98487.1| Outer membrane protein [Elusimicrobium minutum Pei191]
Length = 217
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 72/208 (34%), Gaps = 31/208 (14%)
Query: 2 IKELGLSMFI-MTTISGCGL--------------------------ASREKKKVFLHKSN 34
+K++ L++ ++ C + + +
Sbjct: 1 MKKIVLTVAAGALILAACTTPGKNTGIGAATGAAVGAVGGAVIAHNTGGKAETGAIIGGL 60
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
+ G+ DK E + + G + + L + +
Sbjct: 61 AGAALGGGIGNYYDKQAKELAAI---ATVERNADGSIRVIMKNDILFATGSAELSSQAIN 117
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+ ++ + K+P +I ++ HTDS G+ N +S+ RA + + LI I
Sbjct: 118 DIAAMSKVFKKYPYNIIVVEGHTDSTGSASFNQTLSENRARAVYNQLIAN-NVKTYSIGY 176
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RG+ PI +NDT GR N+R+ + I
Sbjct: 177 RGYGASNPIASNDTAAGRAQNRRVTLNI 204
>gi|218778865|ref|YP_002430183.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218760249|gb|ACL02715.1| OmpA/MotB domain-containing protein [Desulfatibacillum alkenivorans
AK-01]
Length = 259
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
I V+ + V F + + P+L ++A +L + I H+DS
Sbjct: 132 DQIYVNEDERGVVLTFDETVMFDPGSSRIRPEIYPLLDVLAQVLKAVSG-RVLIIGHSDS 190
Query: 120 IGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+N +S RA + Y S + V G PI +N T+ GR N
Sbjct: 191 TPMHSVQYDSNWDLSLSRALNVLYYFTTEHDLSEDRLGVGGMGNTKPIASNKTQAGRDKN 250
Query: 176 QRIEIQIF 183
+R+EI I
Sbjct: 251 RRVEIVIT 258
>gi|163786812|ref|ZP_02181260.1| OmpA domain protein [Flavobacteriales bacterium ALC-1]
gi|159878672|gb|EDP72728.1| OmpA domain protein [Flavobacteriales bacterium ALC-1]
Length = 465
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 16/183 (8%)
Query: 15 ISGCGLAS------------REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ GC A E + D DK +E + +
Sbjct: 282 LMGCPDADGDGVADGSDNCPNESGPAANNGCPWPDTDGDGILDKDDKCPNEAGVAANNGC 341
Query: 63 IVVSRIGD---MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
V + + Y + + +K+ +LQ + I ++P +I+ HTDS
Sbjct: 342 PEVKPTAEVVETLNTYARSILFDTGKASFKKETDQVLQAMVAIFKEYPKADFSIEGHTDS 401
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+G+ N +S RA+ ++ YLI S ++ G+ PI N T+ GR+ N+R+E
Sbjct: 402 VGSKSTNQALSDRRANAVRDYLIAN-GISADRLTAAGYGEDNPIANNKTRAGRKENRRVE 460
Query: 180 IQI 182
+++
Sbjct: 461 VKL 463
>gi|85858730|ref|YP_460932.1| outer membrane porin protein [Syntrophus aciditrophicus SB]
gi|85721821|gb|ABC76764.1| outer membrane porin protein [Syntrophus aciditrophicus SB]
Length = 435
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 54/129 (41%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ + + V + + + +E K+ +Q +A + P
Sbjct: 304 PPVEEKRPEPAAAVEPKAEAPVMMTLHILFASDKYNIEPKYDSEIQKVADYMKANPDVTA 363
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ HTDS + N +SQ RA+ +K+ L+++ I G+ PI TN TK G
Sbjct: 364 VVAGHTDSTHSNAYNKKLSQNRANAVKTALVEKYGIDASRIEAVGYGEDKPIATNKTKAG 423
Query: 172 RQNNQRIEI 180
RQ N+R+ +
Sbjct: 424 RQKNRRVVV 432
>gi|312882598|ref|ZP_07742338.1| peptidoglycan-associated lipoprotein [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369758|gb|EFP97270.1| peptidoglycan-associated lipoprotein [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 176
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 63/181 (34%), Gaps = 11/181 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ + ++ C ++ K ++N ++ + Q
Sbjct: 6 VLKGLLIALPV-LAMTACSSSNDAAKNSGASETNQAQTATDGTVANALGQAGQLSEQ--- 61
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + ++ +L A L++ PS + ++ H D
Sbjct: 62 ------ELKEQALRETQTIYFAFDNSTIASEYEKVLAAHAAYLSQNPSVKVTVEGHADER 115
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + YL IS+ + + P+ T N+R +
Sbjct: 116 GTPEYNIALGERRAKAVAKYLQAL-GVQADQISIVSYGEEKPLLLGQTAEAYAKNRRAVL 174
Query: 181 Q 181
Sbjct: 175 V 175
>gi|262041576|ref|ZP_06014773.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041137|gb|EEW42211.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 488
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 52/108 (48%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ V + L+ +L + P +I + +TD+ G K N +S RA+ ++
Sbjct: 355 LFDVGQARLKDGSTKVLINALVNIRARPGWLIVVTGYTDTTGNKKANQQLSLRRAEAVRD 414
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++Q +V+G +P TNDT GR N+R+EI + PR +
Sbjct: 415 WMLQTSDIPATCFAVQGLGESHPAATNDTPEGRAANRRVEISLVPRTD 462
>gi|152999646|ref|YP_001365327.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
gi|217974400|ref|YP_002359151.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
gi|151364264|gb|ABS07264.1| OmpA/MotB domain protein [Shewanella baltica OS185]
gi|217499535|gb|ACK47728.1| OmpA/MotB domain protein [Shewanella baltica OS223]
Length = 369
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 47/109 (43%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ F ++ +A LNK P + I H +G + N+++S +RA
Sbjct: 252 DVGSIQFANDSAVVKPVFYKDIERLANYLNKNPEFTVEIAGHASHVGKPEYNMVLSDKRA 311
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ L+ + S ++ +G+ P+ D+K N+RIE +
Sbjct: 312 AAVAKILVDKYGISQSRVTSKGYGETQPLVAGDSKEAYAANRRIEAVVT 360
>gi|74316262|ref|YP_314002.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
gi|74055757|gb|AAZ96197.1| probable outer membrane protein [Thiobacillus denitrificans ATCC
25259]
Length = 331
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
D + + + Q + + + + + V++ L +
Sbjct: 172 ADALEAARLEIQRAQTRIAEQEEQLQALNAKKTDRGLVVTLGDVLFGVNKADLTPGGMRN 231
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+Q +A L ++ + + I+ HTDS G N +S+ RA+ +K+ LI GV R I+ R
Sbjct: 232 VQKLADFLKQYETRKLLIEGHTDSTGGDALNQALSERRAEAVKTALIGMGVDGER-IATR 290
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
G+ +P+ +N+T GRQ N+R+E+ + G
Sbjct: 291 GYGKAFPVASNNTAAGRQLNRRVEVVLSENG 321
>gi|330872771|gb|EGH06920.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
gi|330964108|gb|EGH64368.1| ompA family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 260
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 73/180 (40%), Gaps = 13/180 (7%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYI 76
+ ++ ++ +S D+A+ + + + +
Sbjct: 82 TNQRVELAKQTIALRTSEAALQNASADRAKARLEARDAQIAALKNSLNAKQTERGTLVTF 141
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ L+ + +A L + + ++ +TDS G+ N +S+ RA+
Sbjct: 142 GDVLFDYNKAELKPTAQGDIGKLAAFLQENTDRKVIVEGYTDSTGSASYNQSLSERRANS 201
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-------PRGNIK 189
++ L++ GV R ++ G+ +YP+ N + GR N+R+E+ I PR ++K
Sbjct: 202 VRMALVRMGVDPARVVT-MGYGKEYPVADNTSNSGRAMNRRVEVTISNDNQPVAPRSSMK 260
>gi|315298823|gb|EFU58077.1| OmpA family protein [Escherichia coli MS 16-3]
Length = 550
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ + T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 535 VEISLVPRSD 544
>gi|156072340|gb|ABU45492.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302328072|gb|ADL27273.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 511
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 5/142 (3%)
Query: 49 KAEDEFQMQLQDTGIVVS-RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + D G + + + + L + I+ FP
Sbjct: 374 EQAESLNNYKDDDGCPDEVPQPPKKVFVLEGVNFESGKSTITQDSYISLMKVVDIMETFP 433
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I HTD+IG N+ +S +RA+ +K++L+++G++ +R + +G P+ +N
Sbjct: 434 EATFEIVGHTDNIGNKDKNMTLSADRANAVKNFLVEKGIAESRM-TTQGMGDTKPVASNK 492
Query: 168 TKVGRQNNQRIEIQIFPRGNIK 189
T GR N+RIE R +IK
Sbjct: 493 TPEGRAQNRRIEFI---RTDIK 511
>gi|260597724|ref|YP_003210295.1| hypothetical protein CTU_19320 [Cronobacter turicensis z3032]
gi|260216901|emb|CBA30471.1| hypothetical protein CTU_19320 [Cronobacter turicensis z3032]
Length = 520
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 49/109 (44%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L+ +L + P +I + HTD +G + N +S +RA+ ++
Sbjct: 392 SLFDTGQWRLKPGSTKVLVNALVGIKAKPGWLIVVAGHTDDVGDERANQQLSLKRAESVR 451
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ G +V+G+ P N T GR N+R+EI + P+ +
Sbjct: 452 DWMRDTGDVPESCFAVQGYGESRPAAPNTTTQGRALNRRVEISLVPQAD 500
>gi|331658933|ref|ZP_08359875.1| OmpA family of outer membrane porins [Escherichia coli TA206]
gi|331053515|gb|EGI25544.1| OmpA family of outer membrane porins [Escherichia coli TA206]
Length = 550
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ + T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 535 VEISLVPRSD 544
>gi|312885261|ref|ZP_07744938.1| outer membrane protein A precursor [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367068|gb|EFP94643.1| outer membrane protein A precursor [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 323
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L+ + L I +L +P +V+ + +TD+ G K N +S++RA
Sbjct: 209 MGAGNFEFDSAKLKPESANELDSIVEVLEDYPQSVVEVSGYTDTSGPEKYNQKLSEQRAQ 268
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+K+ LI +G+ +R I+ G PI +N+T GR+ N+R+EI I
Sbjct: 269 AVKAVLIAKGIDESR-ITAIGKGEANPIASNETLEGRKQNRRVEINI 314
>gi|148380609|ref|YP_001255150.1| chemotaxis MotB protein [Clostridium botulinum A str. ATCC 3502]
gi|153936730|ref|YP_001388364.1| chemotaxis motB protein [Clostridium botulinum A str. Hall]
gi|148290093|emb|CAL84212.1| putative chemotaxis MotB protein [Clostridium botulinum A str. ATCC
3502]
gi|152932644|gb|ABS38143.1| chemotaxis protein MotB [Clostridium botulinum A str. Hall]
Length = 247
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 10/181 (5%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDM 71
SG + K + +T + + GS E + + V G
Sbjct: 63 SGDSIVDYNMKNGDIPLVGETTKLGRETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRG 122
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNN 126
I + +V F ++ + ++ I ++ P+ + I+ HTD++ +N
Sbjct: 123 IIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPN-EVIIEGHTDNVPIKNEVYGSN 181
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S RA + Y ++ + + G+ PI N++ R N+R+ I I +
Sbjct: 182 WELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRAKNRRVNIVIVSKE 241
Query: 187 N 187
Sbjct: 242 K 242
>gi|153940977|ref|YP_001391952.1| chemotaxis motB protein [Clostridium botulinum F str. Langeland]
gi|152936873|gb|ABS42371.1| chemotaxis motB protein [Clostridium botulinum F str. Langeland]
gi|295319971|gb|ADG00349.1| chemotaxis motB protein [Clostridium botulinum F str. 230613]
Length = 247
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 10/181 (5%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDM 71
SG + K + +T + + GS E + + V G
Sbjct: 63 SGDSIVDYNMKNGDIPLVGETTKLGRETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRG 122
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNN 126
I + +V F ++ + ++ I ++ P+ + I+ HTD++ +N
Sbjct: 123 IIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPN-EVIIEGHTDNVPIKNEVYGSN 181
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S RA + Y ++ + + G+ PI N++ R N+R+ I I +
Sbjct: 182 WELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRAKNRRVNIVIVSKE 241
Query: 187 N 187
Sbjct: 242 K 242
>gi|90410908|ref|ZP_01218922.1| flagellar motor protein [Photobacterium profundum 3TCK]
gi|90328121|gb|EAS44432.1| flagellar motor protein [Photobacterium profundum 3TCK]
Length = 310
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 7/169 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSL-DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ V + + L + + ++QD I V G + I
Sbjct: 123 TGGQSADVATQMNQNNQSEMSESQEQLLEVMQKALDREIQDGAIEVENFGQQVVIRIKEK 182
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERA 134
+F FL+ KF P+++ IA ++ P I I HTD+ ++N +S +RA
Sbjct: 183 GAFPAGSAFLQPKFRPLVRQIADLVKDVPGI-IRISGHTDNQKLDSELYRSNWDLSAQRA 241
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + Q ++ + V G A P+++N T R+ N+R+EI I
Sbjct: 242 VSVAQEMEQVKGFDHKRLRVVGLADTAPLNSNKTAEERKVNRRVEISIM 290
>gi|261365147|ref|ZP_05978030.1| OmpA family protein [Neisseria mucosa ATCC 25996]
gi|288566399|gb|EFC87959.1| OmpA family protein [Neisseria mucosa ATCC 25996]
Length = 421
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 60/174 (34%), Gaps = 12/174 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-P 77
K+ + + + + ++ + V D T I
Sbjct: 228 ASTKVNNLKLPSVTAKQQETQGTI------RLRPLLENEIARKLVSVEDFQDRSTVTILG 281
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ ++ ++ P+L ++ L+ I + +TD +N +SQ R
Sbjct: 282 DGLFESGSAQIQDQYYPVLARVSQALDSVEG-QIVVTGYTDDKPIQSLNFPSNWHLSQAR 340
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
AD +K L+ + I G P+ NDT R N+R+EI +F G
Sbjct: 341 ADAVKEILLNYIKNGGTRIRSEGRGSTDPVAPNDTLENRAKNRRVEITLFTTGT 394
>gi|162456085|ref|YP_001618452.1| OmpA domain-containing protein [Sorangium cellulosum 'So ce 56']
gi|161166667|emb|CAN97972.1| OmpA domain protein [Sorangium cellulosum 'So ce 56']
Length = 210
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTL 123
V D I + + + + +L + + K IAI+ H + G+
Sbjct: 80 VVVTDDKIIINEKIQ-FEYDQATIRTESHSLLDEVVGTIKKHTHIKKIAIEGHASAEGSE 138
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+NL +S RA + YL+ + ++ +GF PI NDT GR+ N+R+E I
Sbjct: 139 DHNLKLSDRRAKAVMKYLVD-HGIAAGMLTAKGFGKSKPIADNDTPEGREKNRRVEFNIV 197
Query: 184 PRGNIKK 190
+ +K
Sbjct: 198 EQDTAQK 204
>gi|288940835|ref|YP_003443075.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
180]
gi|288896207|gb|ADC62043.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
Length = 351
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 50 AEDEFQMQLQDTGIVVSRIG------DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
E+ +++ + + D + + ++ + P L+ IA +L
Sbjct: 212 VEEVLSQPMRERMVSIEAKEMAQGLSDAGRIAVHGIQFDFDQATIKDESKPQLEQIALML 271
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ P + I HTD+ GTL+ N+ +S+ RA+ + LIQ + G A P+
Sbjct: 272 VENPDLKLYIVGHTDNRGTLEYNMDLSRRRAEEVVRTLIQSYGILGERLKPMGVAGLAPL 331
Query: 164 DTNDTKVGRQNNQRIEIQ 181
+N T+ GR N+R+EI
Sbjct: 332 TSNATEAGRALNRRVEIV 349
>gi|224370138|ref|YP_002604302.1| Pal [Desulfobacterium autotrophicum HRM2]
gi|223692855|gb|ACN16138.1| Pal [Desulfobacterium autotrophicum HRM2]
Length = 197
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 64/197 (32%), Gaps = 16/197 (8%)
Query: 1 MIKELGLSMFIMTTISG------CGLAS--REKKKVFLHKSNDTDIVNKRFGSSLDKA-- 50
M K++ S+ + ++G C E L + D D K + +A
Sbjct: 1 MKKQVFRSLVLALMVAGLVCTVSCAKKPVVSEPMGAALEGTVDPDAAAKAAALAKQRAME 60
Query: 51 -----EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
E + + + L +L+ A L +
Sbjct: 61 EAMLREKALKESALKDAELAKQAAARSRFTNQNIHFAYDSADLTPMSRTLLKEKALWLGE 120
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P ++ ++ H D GT++ NL + RA K + + +S + + PID
Sbjct: 121 NPGVMVVVEGHCDDRGTMEYNLALGDRRAFSAKK-FLTDLGIAESRLSTISYGEERPIDP 179
Query: 166 NDTKVGRQNNQRIEIQI 182
+ + N+R + I
Sbjct: 180 ANNETAWAKNRRAQFVI 196
>gi|269119617|ref|YP_003307794.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
gi|268613495|gb|ACZ07863.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
Length = 179
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 77/189 (40%), Gaps = 17/189 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ L +F++ A K + + I + + Q Q+
Sbjct: 1 MKKKIILLLFVLAVF---STARPFTTKQMRNDT----IRINALEVEFVEEKAAVQEVKQN 53
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
V +I I + ++ ++ +L+ + + + + I+ +TDS
Sbjct: 54 GSGEVKKI---IRLNENKLYFDFDDSRIKPEYYGLLREMVEEIKAM-DSDVIIRGYTDSK 109
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQN 174
GT + N +SQ RA+ ++ LI+ G+ S R + G + PI N D GR
Sbjct: 110 GTDEYNNRLSQRRAESVRDKLIEFGLESGRVLKTEGMGERNPIAPNTNKDGSDNPAGRAL 169
Query: 175 NQRIEIQIF 183
N+RIE+++
Sbjct: 170 NRRIELELV 178
>gi|188587883|ref|YP_001922642.1| chemotaxis MotB protein [Clostridium botulinum E3 str. Alaska E43]
gi|188498164|gb|ACD51300.1| putative chemotaxis MotB protein [Clostridium botulinum E3 str.
Alaska E43]
Length = 244
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 80/214 (37%), Gaps = 33/214 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKV--------------------FLHKSNDTDIVNKRF- 43
+ L M + + ++K K ++N+ IVN
Sbjct: 22 ITLLMVLFVVLYASSNVDKQKYKQISNSFKQAFSIGDAPRAINETGEETNENSIVNDAVM 81
Query: 44 --GSSLDKAEDEFQMQLQD----TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
LD A+ + +++ + + +V F + ++ ++ L
Sbjct: 82 GESEKLDTAKSKVDELIKEYNLEGSVSTQIQERGLIISFNDNVFFNSGDATIKNEYKQKL 141
Query: 97 QLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
I+ ILN I ++ +TD+ +N +S RA + L++ G S+ +
Sbjct: 142 ISISKILN-NIDNYIRVEGNTDNVAINTENFHSNWQLSAIRAANVVELLVKEGNISSDKL 200
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S G+ P+ +NDT+ GR N+R++I I
Sbjct: 201 SAIGYGEYRPVKSNDTEDGRAANRRVDIVILNNE 234
>gi|322806981|emb|CBZ04551.1| flagellar motor rotation protein MotB [Clostridium botulinum H04402
065]
Length = 247
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 10/181 (5%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDM 71
SG + K + +T + + GS E + + V G
Sbjct: 63 SGDSIVDYNMKNGDIPLVGETTKLGRETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRG 122
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNN 126
I + +V F ++ + ++ I ++ P+ + I+ HTD++ +N
Sbjct: 123 IIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPN-EVIIEGHTDNVPIKNEVYGSN 181
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S RA + Y ++ + + G+ PI N++ R N+R+ I I +
Sbjct: 182 WELSTARAVNVLRYFVETKKQNPARFTAAGYGEYRPIAQNNSDANRAKNRRVNIVIVSKE 241
Query: 187 N 187
Sbjct: 242 K 242
>gi|319796494|ref|YP_004158134.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315598957|gb|ADU40023.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 188
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 83/191 (43%), Gaps = 9/191 (4%)
Query: 2 IKELGLS----MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+++L +S + I+GC AS+ + + + L + + +
Sbjct: 1 MRKLLVSGAAAAAALMFIAGC--ASQSAPPPAPAPAAQPAPPANSWTARLAALKTDLEAS 58
Query: 58 LQDTGIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ TG+V+ + D + IP + +++ +L +A L + + +
Sbjct: 59 TKGTGVVIEQTADNQLHVVIPNELSFDTGRANVKRNLAQVLDKVAEGLKSATAASVRVVG 118
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD+ G+ + N +S RAD ++++L+ R S I+ G + P+ N T GR N
Sbjct: 119 HTDATGSEEGNERLSVSRADSVRNHLVGR-GVSTTAITTDGRGSREPLADNGTAAGRAQN 177
Query: 176 QRIEIQIFPRG 186
+R+EI + +
Sbjct: 178 RRVEIFVAEKA 188
>gi|326316639|ref|YP_004234311.1| peptidoglycan-associated lipoprotein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323373475|gb|ADX45744.1| peptidoglycan-associated lipoprotein [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 181
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 67/184 (36%), Gaps = 16/184 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASR-----EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
K + L++ + ++GC + + K + + N S + +
Sbjct: 6 FKRISLALTVAALMAGCSSGVKLEDVPVENKGATSTAPNGANSNGNSQSGVAPVDLNQSA 65
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + V+RI ++ ++ +++ A + + I+ H
Sbjct: 66 RDAAGPVGVARI----------VYFDFDSYVVKPEYQSLIEQHARFIKASQGRKVMIEGH 115
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD G + NL + Q+RA+ ++ + + + F + P +T+ N+
Sbjct: 116 TDDRGGREYNLALGQKRAEAVRR-ALGLLGVPDGQMEAVSFGKEKPAVQGNTEDAFSQNR 174
Query: 177 RIEI 180
R+E+
Sbjct: 175 RVEL 178
>gi|256846747|ref|ZP_05552203.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|256717967|gb|EEU31524.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
Length = 190
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ +L+ I + + + I I HTDSIG+ N +S+
Sbjct: 62 IVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQN-NYEITIVGHTDSIGSNAYNFKLSR 120
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA+ +K+ L++ G+S +R + + + PI TN TK GR N+R+E ++ R ++
Sbjct: 121 RRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRETVQ 178
>gi|326576289|gb|EGE26204.1| outer membrane protein CD [Moraxella catarrhalis CO72]
Length = 453
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 4/163 (2%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
++ + + D LD + G V
Sbjct: 275 EEAPAVIEDIVVDSDGDGVPDHLDACPGTPVNAVVDPRGCPVQVNLVEELRQELRVFFDY 334
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL---KNNLLISQERADVIKSY 140
+ ++ ++ + +A + +FP+ I+ H + N +S+ RA+ +KS
Sbjct: 335 DKSIIKPQYREEVAKVAAQMREFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSM 394
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L + ++ G+ + PI N T G+ N+R+E I
Sbjct: 395 LSNEFGIAPNRLNAVGYGFDRPIAPNTTAEGKAMNRRVEAVIT 437
>gi|171315988|ref|ZP_02905216.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171098892|gb|EDT43683.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 592
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 44/106 (41%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L + ++ P + + + D G NL +S +RA ++
Sbjct: 474 SLFDSGKARLRTGTTRAMVDALELIKAHPDKRVLVAGYADDQGRPDRNLKLSIDRASAVR 533
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+L++ +++G+ P+ N T GR N+R+EI + P
Sbjct: 534 DWLVEASGIPPTRFAIQGYGDTRPVADNATPEGRAKNRRVEITLVP 579
>gi|186477205|ref|YP_001858675.1| peptidoglycan-associated lipoprotein [Burkholderia phymatum STM815]
gi|184193664|gb|ACC71629.1| peptidoglycan-associated lipoprotein [Burkholderia phymatum STM815]
Length = 169
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 60/184 (32%), Gaps = 21/184 (11%)
Query: 1 MIKELGLSMFIMTT--ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M+ +L +++ + ++ C + + + +
Sbjct: 1 MMSKLRIALAVAMVGTLAACHSGVKLDENAGKGGATGAQPNPNDVAT------------- 47
Query: 59 QDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + D ++ + P+LQ A L P + IQ +T
Sbjct: 48 ----VNVDPLNDPNSPLAKRSIYFDFDSYSVKDDYQPLLQQHAQYLKSHPQRHVLIQGNT 103
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ + + + + P T + N+R
Sbjct: 104 DERGTSEYNLALGQKRAEAVRR-SLSLLGVPDSEMEAVSLGKEKPQATGHDEASWAQNRR 162
Query: 178 IEIQ 181
++
Sbjct: 163 ADLV 166
>gi|91215422|ref|ZP_01252393.1| outer membrane protein, OmpA/MotB family [Psychroflexus torquis
ATCC 700755]
gi|91186374|gb|EAS72746.1| outer membrane protein, OmpA/MotB family [Psychroflexus torquis
ATCC 700755]
Length = 457
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V D+ + + +E Q +L + ++
Sbjct: 305 GCPYPDADGDGVLDKDDMCPDVAGTEANNGCPEVTEEIQKELNEYAKTIN---------- 354
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + K L I IL+++P+ ++ HTDS+G+ KNN +S+ RA
Sbjct: 355 ----FETGKTTISKNSEEALTAIIAILDEYPNAKFTVEGHTDSVGSAKNNESLSEARALS 410
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+KSYL++ GV R S GF + P+++NDTK GR N+R+EI N+KK
Sbjct: 411 VKSYLVKNGVDEFRLSSA-GFGEQKPVESNDTKAGRAENRRVEI------NLKK 457
>gi|206580585|ref|YP_002236817.1| OmpA domain protein [Klebsiella pneumoniae 342]
gi|206569643|gb|ACI11419.1| OmpA domain protein [Klebsiella pneumoniae 342]
Length = 567
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 52/108 (48%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ V + L+ +L + P +I + +TD+ G K N +S RA+ ++
Sbjct: 434 LFDVGQARLKDGSTKVLINALVNIRARPGWLIVVTGYTDTTGNKKANQQLSLRRAEAVRD 493
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++Q +V+G +P TNDT GR N+R+EI + PR +
Sbjct: 494 WMLQTSDIPATCFAVQGLGESHPAATNDTPEGRAANRRVEISLVPRTD 541
>gi|78356732|ref|YP_388181.1| OmpA family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219137|gb|ABB38486.1| OmpA family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 352
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 56/170 (32%), Gaps = 9/170 (5%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM 71
+ + GC V + G D D +++ V
Sbjct: 190 IAALKGCS--------VTADAATLLADEQALNGFVKDVFYDTREVKKAPAPAPVVTPETE 241
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + + +L AT++ + + + HTDS G N +SQ
Sbjct: 242 EVIVLRSVQFAFDSAEISNEAEDVLTEAATLIEEHAGKQVTLAGHTDSTGPEAYNQKLSQ 301
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA+ + + + I GF P N+T GR+ N+R+EI
Sbjct: 302 RRAESV-KAFLAKEGVDANRIKAVGFGESEPKFDNNTAEGRKLNRRVEIT 350
>gi|118578882|ref|YP_900132.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118501592|gb|ABK98074.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 417
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 61 TGIVVSRIGDMITCYIPVHV---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
G V + G + P + ++ ++ ++ L+ +A L +FP+ AI+ HT
Sbjct: 288 EGTTVDKTGCPVKLCSPTVLNIEFDTNKSNIKPQYNDELKRVADFLAEFPTAKGAIEGHT 347
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D++G N+ +SQ RA+ ++SYLI+ + IS +G P+ +N T GR+ N+R
Sbjct: 348 DNVGGKAYNMKLSQRRANSVRSYLIKTFNVAPERISAKGHGLTKPVASNKTADGRKQNRR 407
Query: 178 IE 179
IE
Sbjct: 408 IE 409
>gi|162454068|ref|YP_001616435.1| hypothetical protein sce5792 [Sorangium cellulosum 'So ce 56']
gi|161164650|emb|CAN95955.1| hypothetical protein sce5792 [Sorangium cellulosum 'So ce 56']
Length = 985
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
VN+ + + + + +V +G+ I + +++
Sbjct: 840 VNQADVRTSEDTRAALTVNKRPKISLVKVLGNEIKIS-RQIHFETDSAKILGDSNALMEE 898
Query: 99 IATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IA +L + P+ + IQ HTD+ G ++N +S+ RA+ ++++LI+ GV +R + +G+
Sbjct: 899 IADVLQRNPNIRKVEIQGHTDNTGGREHNQTLSEARANAVRAWLIRAGVDGSRLL-AKGY 957
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
P+ N T + N+R++ I +
Sbjct: 958 GQDRPVAPNVTPANKAKNRRVQFIIVEK 985
>gi|149190763|ref|ZP_01869029.1| outer membrane protein OmpA [Vibrio shilonii AK1]
gi|148835419|gb|EDL52390.1| outer membrane protein OmpA [Vibrio shilonii AK1]
Length = 338
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + +V+++ + ++ + L + + ++ P +
Sbjct: 195 QEASAEEPHVAEAVVMTKTFEQVS---GQENFEFNSTKLNENTKSDYDPLIALMQDHPDS 251
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ I +TDS G + N IS+ERA+ I +YL +G+ +R +V G PI N TK
Sbjct: 252 TVTITGYTDSSGPEEVNQRISEERAESIAAYLESQGIDRSRM-TVSGMGEANPIADNSTK 310
Query: 170 VGRQNNQRIEIQI 182
GR N+R+EI +
Sbjct: 311 EGRAQNRRVEITV 323
>gi|152975140|ref|YP_001374657.1| flagellar motor protein MotS [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152023892|gb|ABS21662.1| OmpA/MotB domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 225
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTG---IVVSRIGDMITCYIPVH-VSFVSEVFLEKKFLPMLQLIATI 102
+D + + + + G + V R ++ I + + + ++ + ++ +A
Sbjct: 81 MDNLYKKLKGYVTENGIQEVQVYREDTGVSIVIVDNLIFDTGDANVKPEAKEIISRLAGF 140
Query: 103 LNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS +N +S RA + +LI+ ++ G+A
Sbjct: 141 FQSVPN-PIVVEGHTDSRPIRNAKFPSNWELSSARAANMIHHLIEVYEIDPNRLAAVGYA 199
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ N+R+ I +
Sbjct: 200 DTKPVAPNDSPDNWAKNRRVVIYV 223
>gi|254496226|ref|ZP_05109120.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella drancourtii LLAP12]
gi|254354531|gb|EET13172.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella drancourtii LLAP12]
Length = 175
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 54/178 (30%), Gaps = 15/178 (8%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+LGL + ++ C A + E
Sbjct: 8 KLGLLAASVLFVAACSKAPG-SADGAGISDAGASAQGLGQFTHFSGQEP-------GESY 59
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + + L K+LP + A L + + HTD G+
Sbjct: 60 TTQAPHNQLYL------FSYDDSNLNPKYLPSVNAQAEYLKSHAGARVLVAGHTDERGSR 113
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA+ + L S + I + + + PI+ + N+R+E
Sbjct: 114 EYNVALGERRANTVADILRMA-GVSRQQIRIVSYGKERPINLGHDEASHLQNRRVEFT 170
>gi|110637988|ref|YP_678195.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC
33406]
gi|110280669|gb|ABG58855.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC
33406]
Length = 517
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T + VS+ L ++ L + IL P I I HTD++G N+ +S +
Sbjct: 406 TVQLNNIFFDVSKSTLRQESYAELDRLYLILQNNPVMEIEIDGHTDNVGDPIINMQLSND 465
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ +K YL+++G++ R ++ +GF PI +NDT+ ++ N+R+E I
Sbjct: 466 RANAVKDYLLKKGIAPGRIVT-KGFGGTKPIVSNDTEELKKLNRRVEFTIL 515
>gi|330807883|ref|YP_004352345.1| hypothetical protein PSEBR_a1163 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375991|gb|AEA67341.1| Conserved hypothetical protein; putative outer membrane protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 231
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQ 131
T I ++ L +L +AT L + +T + + HTDS+G+ N +S+
Sbjct: 119 TIVIRDVHFEFNKATLTPADKDVLSGVATRLKQETSTTQLRVTGHTDSVGSDAYNQRLSE 178
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+RA+ + YL+ GV F+SV G P+ N T GR N+R EI+I
Sbjct: 179 KRANSVVQYLVDNGVPRASFVSVSGAGESQPVADNKTADGRAMNRRTEIKI 229
>gi|308048595|ref|YP_003912161.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307630785|gb|ADN75087.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 314
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 10/182 (5%)
Query: 17 GCGLASREKKKVFLHKSNDT---DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
G + + + + T K + + Q+ D I V +G I
Sbjct: 127 GTSSQTANQPRAEQSNQSQTRTSASDADNVNELTKKIAQQLEDQILDGAIEVESLGQQII 186
Query: 74 CYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLL 128
I +F FL+ +F P++ + +L P I++ HTD+ ++N
Sbjct: 187 IRIREKGAFPAGSAFLQPRFRPVIHAVGNLLKDVPGI-ISVTGHTDNTTIDNELYRSNWE 245
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+S +RA + L++ + +RG A P+ +NDT GR N+R+EI I +G
Sbjct: 246 LSTQRAVSVAHELVKVEGFDPGRMELRGVAENEPLVSNDTWEGRVRNRRVEITI-NQGKA 304
Query: 189 KK 190
K+
Sbjct: 305 KE 306
>gi|237752179|ref|ZP_04582659.1| cadF [Helicobacter winghamensis ATCC BAA-430]
gi|229376421|gb|EEO26512.1| cadF [Helicobacter winghamensis ATCC BAA-430]
Length = 307
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ A + + PS I HTDS G + N +S+ RA+ +
Sbjct: 198 SVQFPFDSSVVAPEYNAEIKDFAQSMKENPSQTAIISGHTDSTGNDEYNQKLSERRANAV 257
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K +I+ + +G+ PI N TK GRQ N+R+E +I
Sbjct: 258 KDAIIEE-GVQAERLQAKGYGESKPIADNATKEGRQENRRVEAEI 301
>gi|307312753|ref|ZP_07592383.1| OmpA/MotB domain protein [Escherichia coli W]
gi|306907188|gb|EFN37694.1| OmpA/MotB domain protein [Escherichia coli W]
gi|315062099|gb|ADT76426.1| Putative outer membrane protein/OmpA domain protein [Escherichia
coli W]
gi|323377319|gb|ADX49587.1| OmpA/MotB domain protein [Escherichia coli KO11]
Length = 550
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDTLVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 535 VEISLVPRSD 544
>gi|167629589|ref|YP_001680088.1| flagellar motor protein motb, putative [Heliobacterium
modesticaldum Ice1]
gi|167592329|gb|ABZ84077.1| flagellar motor protein motb, putative [Heliobacterium
modesticaldum Ice1]
Length = 298
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 71/181 (39%), Gaps = 12/181 (6%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE------FQMQLQDTGIVVSRIG 69
SG + V + + D E + + + + + + +
Sbjct: 60 SGIMANPTPLDTEGASDAPPDMSVMESLKETRDLQEIKNRVDRYIEEKGLEKQVETNLVR 119
Query: 70 DMITCYIPVH-VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---- 124
+ + + + L+++ LP L LIA L+ + + I HTD++
Sbjct: 120 EGLQISFRDAALFDSGKADLKREALPALDLIADTLHNLSN-EVRIAGHTDNLPISTAEFP 178
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+N +S +RA + Y++ ++ + G+ +P TNDT GR N+R+E+ I
Sbjct: 179 SNWDLSAKRALNVMKYILNDKRNNPVKFTAVGYGEYHPKATNDTPEGRAQNRRVEVMIIR 238
Query: 185 R 185
+
Sbjct: 239 Q 239
>gi|254302309|ref|ZP_04969667.1| OmpA family outer membrane protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322501|gb|EDK87751.1| OmpA family outer membrane protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 189
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ +L+ I + + + I I HTDSIG+ N +S+
Sbjct: 61 IVLDERALNFDFDKSNVKPEYYDLLKNIKEFVEQN-NYEITIVGHTDSIGSNAYNFKLSR 119
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA+ +K+ L++ G++ +R + + + PI TN+TK GR N+R+E ++ R ++
Sbjct: 120 RRAESVKAKLLEFGLTEDRIVGIEAMGEEQPIATNETKEGRAQNRRVEFKLVQRETVQ 177
>gi|189423111|ref|YP_001950288.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
gi|189419370|gb|ACD93768.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
Length = 271
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 6/165 (3%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV- 83
++ T K F E + + + + F
Sbjct: 100 RQGGMDKGRGKTKAEEKEFKEIQSAIEAYLIKHGAQNKVSIGITRRGLVVSLKEAGFFDS 159
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKS 139
++ +L I + ++ + + ++ HTD+I N +S RA +
Sbjct: 160 GSAVIKPAGYQLLNTILEAMTQYSN-PLRVEGHTDNIPISTPLFPSNWELSVSRATNVLR 218
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
YL + +S G+ P N T GR N+R++I +
Sbjct: 219 YLQKNYDVEPGKLSATGYGEFRPTAENSTPEGRSKNRRVDIVLLS 263
>gi|91776690|ref|YP_546446.1| OmpA/MotB [Methylobacillus flagellatus KT]
gi|91710677|gb|ABE50605.1| OmpA/MotB [Methylobacillus flagellatus KT]
Length = 180
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 59/181 (32%), Gaps = 5/181 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + +S+ + + C + ++ + V SS +
Sbjct: 1 MNKNIVISVLLAAMLVACSSKAVKETPQAAVEDKSPVPVQSSTSSSESATSGVSDSSVAS 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ +F P+++ A LN + +Q +TD
Sbjct: 61 NPLK----DPNNILSKRNVYFDFDSDAIKAEFRPLIEAHAQYLNSNSGAKVFLQGNTDER 116
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + NL + Q RA +K ++ + I F + + Q ++R+E
Sbjct: 117 GTREYNLSLGQRRAVAVKK-VLNLLGVQDTQIETVSFGKEKANTSCVDDTCWQQDRRVEF 175
Query: 181 Q 181
Sbjct: 176 V 176
>gi|170697917|ref|ZP_02889001.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170137192|gb|EDT05436.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 587
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 44/106 (41%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L + ++ P + + + D G NL +S +RA ++
Sbjct: 469 SLFDSGKARLRTGTTRAMVDALELIKAHPGKRVLVAGYADDQGRPDRNLKLSIDRASAVR 528
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+LI+ +++G+ P+ N T GR N+R+EI + P
Sbjct: 529 DWLIEASGIPPTRFAIQGYGDTRPVADNATPEGRAKNRRVEITLVP 574
>gi|149927733|ref|ZP_01915985.1| outer membrane protein [Limnobacter sp. MED105]
gi|149823559|gb|EDM82789.1| outer membrane protein [Limnobacter sp. MED105]
Length = 174
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 13/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K L +S ++ ++ C A K + + T G ++ L
Sbjct: 5 MVKYLAIS-AMVAVLAACSSAVPLNDKPTV--ESKTGTAPGSDGRAVPTVTPGDADPLN- 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
++ ++ ++Q A L P+ + +Q +TD
Sbjct: 61 --------DPQGVLAKRSVYFDYDSYTVKSEYRELVQNHAKYLVANPNRKVVVQGNTDER 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + NL + Q RAD +K+ ++ I F + P T + N+R +I
Sbjct: 113 GGAEYNLALGQRRADAVKTLMLAL-GVKEGQIETVSFGKEKPKATGSNEAAYAENRRSDI 171
Query: 181 Q 181
Sbjct: 172 V 172
>gi|330009105|ref|ZP_08306392.1| OmpA family protein [Klebsiella sp. MS 92-3]
gi|328534943|gb|EGF61477.1| OmpA family protein [Klebsiella sp. MS 92-3]
Length = 567
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 52/108 (48%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ V + L+ +L + P +I + +TD+ G K N +S RA+ ++
Sbjct: 434 LFDVGQARLKDGSTKVLINALVNIRARPGWLIVVTGYTDTTGNKKANQQLSLRRAEAVRD 493
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++Q +V+G +P TNDT GR N+R+EI + PR +
Sbjct: 494 WMLQTSDIPATCFAVQGLGESHPAATNDTPEGRAANRRVEISLVPRTD 541
>gi|304312902|ref|YP_003812500.1| Bacterial outer membrane protein, OmpA [gamma proteobacterium HdN1]
gi|301798635|emb|CBL46867.1| Bacterial outer membrane protein, OmpA [gamma proteobacterium HdN1]
Length = 169
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 50/181 (27%), Gaps = 21/181 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ I+GC ++ + V S+ D
Sbjct: 9 LFGLIAAVAIAGCSSSAEDT---TAVDEGAGTAVVAPVTSTTDTGASTSS---------- 55
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
V + + +LQ A L+ I I+ H D GT +
Sbjct: 56 -------ILSQRVVYFDFDKSAVRADAYEILQAHAQYLSSHAGARIRIEGHADERGTREY 108
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N+ + + RA + + + + V + + PI + N+R E+
Sbjct: 109 NMALGERRAKAV-QSFLNANGAGAGQLEVVSYGEENPIALGHDEASWAQNRRSELVYTSE 167
Query: 186 G 186
Sbjct: 168 A 168
>gi|332975480|gb|EGK12371.1| OmpA/OmpF family outer membrane protein OprF [Psychrobacter sp.
1501(2011)]
Length = 318
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 50/101 (49%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ + L+ +A L+ +T ++ HTDS G NL +SQ RA+ +
Sbjct: 211 DVLFDFDSAKIKPTYQQRLREVAQFLSANANTKAILEGHTDSTGPASYNLTLSQARAEAV 270
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
K L+ + ++ +G+ PID N T GRQNN+R+
Sbjct: 271 KKELVNKHGIDPNRLTTQGYGESKPIDNNSTVQGRQNNRRV 311
>gi|309796906|ref|ZP_07691307.1| OmpA family protein [Escherichia coli MS 145-7]
gi|308119434|gb|EFO56696.1| OmpA family protein [Escherichia coli MS 145-7]
Length = 550
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 535 VEISLVPRSD 544
>gi|307545157|ref|YP_003897636.1| peptidoglycan-associated lipoprotein [Halomonas elongata DSM 2581]
gi|307217181|emb|CBV42451.1| K03640 peptidoglycan-associated lipoprotein [Halomonas elongata DSM
2581]
Length = 180
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 58/185 (31%), Gaps = 12/185 (6%)
Query: 1 MIK-----ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M++ F + ++GC + + G+ +
Sbjct: 1 MMQFKPYARSLAVAFSLALVAGCSSTGGTQDGSMSGSGTTSGSGAGASGAGTGQVSGSGL 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
++ D + + +F +L A L P+ + +Q
Sbjct: 61 GDGS------GQMADSRIPEVRTIYFAFDSDAIRPEFQSVLNAHARFLRNNPNANVVLQG 114
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD GT + NL + + RA ++ +L + S + V + + P + N
Sbjct: 115 HTDERGTREYNLALGERRAGAVEEFLSVQ-GVSPSQVEVVSYGEERPAARGSNEEAYAQN 173
Query: 176 QRIEI 180
+R+
Sbjct: 174 RRVVF 178
>gi|157156833|ref|YP_001464142.1| OmpA domain-containing protein [Escherichia coli E24377A]
gi|157078863|gb|ABV18571.1| OmpA domain protein [Escherichia coli E24377A]
Length = 550
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 535 VEISLVPRSD 544
>gi|163787137|ref|ZP_02181584.1| outer membrane protein, OmpA family [Flavobacteriales bacterium
ALC-1]
gi|159877025|gb|EDP71082.1| outer membrane protein, OmpA family [Flavobacteriales bacterium
ALC-1]
Length = 319
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 9/161 (5%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFVSEV-FLE 89
+ + V +++ +D L + G+ V + + + + F S +
Sbjct: 148 AELENVIAAKDANMRALKDAISKALTNFEGKGLTVEQRDGKVYVSMENKLLFQSGSWSVG 207
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQR 144
+ +Q + ++L + P + I+ HTD++ N +S +RA I + L +
Sbjct: 208 TEGRKAVQQLGSVLAENPEISVLIEGHTDNVPYKGNAQLSGNWDLSAKRATAIVNILREN 267
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
S ++ G PI TN T G+ N+RIE+ + P+
Sbjct: 268 SAISPENLTAAGRGEFAPIATNSTAEGKAKNRRIEVVLTPK 308
>gi|291437526|ref|ZP_06576916.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
gi|291340421|gb|EFE67377.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 218
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 76/198 (38%), Gaps = 16/198 (8%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN--------------KRFGSSLDKA 50
+M ++T++ G A ++ + T +
Sbjct: 20 TAATMLVVTSLIGATTAYADESPSVPPGTEATASAPVELDPNDPDLKLPDGATLAEPKVL 79
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPST 109
+ + ++ Q + + V F L + + IA + +T
Sbjct: 80 DIKQVVEDQSGDERREDTNSDVKFALQAEVLFGKDSAKLGAQAKARIATIAEEIKTQNAT 139
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I + TD++G+ + ++S++RA+ + L Q S+ VRG+ +YPI N T+
Sbjct: 140 RIRVFGFTDNLGSSAHGDVLSRQRANAVHGVLEQELNDSDVTYEVRGYGEQYPIADNSTE 199
Query: 170 VGRQNNQRIEIQIFPRGN 187
GR+ N+R+EI FPR
Sbjct: 200 AGRKKNRRVEIS-FPRAE 216
>gi|158522006|ref|YP_001529876.1| OmpA/MotB domain-containing protein [Desulfococcus oleovorans Hxd3]
gi|158510832|gb|ABW67799.1| OmpA/MotB domain protein [Desulfococcus oleovorans Hxd3]
Length = 388
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 7/164 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT--GIVVSRIGDMITCYI 76
A EK + + D ++ Q Q T G V+ G + +
Sbjct: 226 APAVVEKPRPAPAPQPVVEAAPAIADDDRDGVPND-QDQCPGTPIGAKVNARGCWVIEGL 284
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + L + T+L P + +Q HTDS G N ++S++RA
Sbjct: 285 N---FERARADIMADSFAKLDEVVTVLKNNPELRLEVQGHTDSRGNPGFNQVLSEQRAGA 341
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ Y + RG++++R +S +GF PI NDT GR N+R+E+
Sbjct: 342 VVRYFVSRGIAADRLVS-KGFGPSQPIADNDTAEGRAENRRVEL 384
>gi|256846250|ref|ZP_05551707.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|256718019|gb|EEU31575.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
Length = 191
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ +L+ I + + + I I HTDSIG+ N +S+
Sbjct: 63 IVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQN-NYEITIVGHTDSIGSNAYNFKLSR 121
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA+ +K+ L++ G+S +R + + + PI TN TK GR N+R+E ++ R ++
Sbjct: 122 RRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRETVQ 179
>gi|222034509|emb|CAP77251.1| hypothetical protein LF82_430 [Escherichia coli LF82]
gi|312947346|gb|ADR28173.1| hypothetical protein NRG857_13805 [Escherichia coli O83:H1 str. NRG
857C]
Length = 550
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ + T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 535 VEISLVPRSD 544
>gi|312891209|ref|ZP_07750731.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311296376|gb|EFQ73523.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 267
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 13/180 (7%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-------DTGIVVSRIGDM 71
+ + L K + D+A + + +LQ +G+ V
Sbjct: 78 SSSKVSQLSTDLQKREARLKEVEDILRKRDEATNALKEKLQKALLGFQQSGLTVDIRNGK 137
Query: 72 ITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI-----GTLKN 125
+ + + F S +++K L+ +A +LNK P IA++ HTD G +K+
Sbjct: 138 VYVSLADKLLFPSGSIVIDEKGKSALKQLAAVLNKEPDIYIAVEGHTDDKKVINLGQIKD 197
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S RA + YL + ++ G PID T R N+RIEI + PR
Sbjct: 198 NWDLSVLRATSVTRYLTETEKVDPVRLTATGKGQFQPIDPAGTPEARAKNRRIEIVLSPR 257
>gi|260595859|ref|YP_003208430.1| hypothetical protein CTU_00670 [Cronobacter turicensis z3032]
gi|260215036|emb|CBA26725.1| hypothetical protein CTU_00670 [Cronobacter turicensis z3032]
Length = 380
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 59/154 (38%), Gaps = 7/154 (4%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFL-EKKFL 93
T R + + + +++ + V D + F S + ++
Sbjct: 212 VTVQQPAREVAPVLNLRGFLRPEIEAGLVAVRDEADRSVVILKGDGLFASASTVVRDRYE 271
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSN 149
P++ +A +N I + ++D++ +N +S RA+ ++ L +
Sbjct: 272 PVIDRVAQAMNNVSG-KILVVGYSDNVPIRSARFASNYELSLSRAESVQKMLQAHLADPS 330
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R + +G PI N+T R N+R+EI +
Sbjct: 331 R-VRAQGRGEMDPIAPNNTPENRARNRRVEITLL 363
>gi|253702173|ref|YP_003023362.1| peptidoglycan-associated lipoprotein [Geobacter sp. M21]
gi|251777023|gb|ACT19604.1| peptidoglycan-associated lipoprotein [Geobacter sp. M21]
Length = 200
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 23/200 (11%), Positives = 61/200 (30%), Gaps = 19/200 (9%)
Query: 2 IKELGLSMFIMTTI-----SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
++++ L ++ T +GC + + + + + + Q
Sbjct: 1 MRKMILGSLVVLTFGALLSAGCAKKDVVRTEEPISAAQSAPTQAPATQARPEADSGAAQQ 60
Query: 57 QLQDTGIVVSRI-------------GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ +T + + + L ++ L A L
Sbjct: 61 PITETTPSREQAVTQETAKEAGTGATQEVQAELQKVYFNFDAADLSEEARGSLSKNAEYL 120
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
++ + I+ + D G+ N+ + + RA + + ++ +S + + P
Sbjct: 121 SRQAGIKVRIEGNCDERGSDDYNMALGERRAKAARD-YLVNLGIASDRLSTISYGEEKPA 179
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
D + N+R E I
Sbjct: 180 DPGHDEAAWAKNRRAEFVIV 199
>gi|261417146|ref|YP_003250829.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373602|gb|ACX76347.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326585|gb|ADL25786.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 232
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
GI V L L L L + P I ++ HT S
Sbjct: 106 GGISVVFDDTRSELT--GVTFKAGSAELVPSSLKTLNAAIAGLKRNPKAKIEVEGHTSSD 163
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ + N +S++RA+ +++Y+I++G+ ++R ++ G+ P N T+ GR+ N+RIE+
Sbjct: 164 GSAELNQQLSEDRANSVRNYMIEQGIDADR-VTAVGYGPSRPKGDNSTEAGRRANRRIEL 222
Query: 181 QIFPRGNI 188
++ +
Sbjct: 223 KVLNADEV 230
>gi|124008054|ref|ZP_01692753.1| peptidoglycan-associated cytoplasmic membrane protein, putative
[Microscilla marina ATCC 23134]
gi|123986468|gb|EAY26274.1| peptidoglycan-associated cytoplasmic membrane protein, putative
[Microscilla marina ATCC 23134]
Length = 563
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 1/158 (0%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+ L ++++K + + + + + + +
Sbjct: 407 GEALLVDVKTGEVISKADEAKALANTTKLARHRPENLRPLESLKAYKKLIFSHLLFDYNS 466
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ K L LQ IA +L K P + I +HTD+ GT +N+ +S++RA +K +L++ G
Sbjct: 467 AKLDDKTLGYLQTIAQLLKKEPQLKLEISAHTDNHGTHDDNMNLSKQRAQAVKEFLVKAG 526
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
V R +S +G+ P+ N T R+ N+R+E+++
Sbjct: 527 VDVKR-LSAKGYGETRPLVPNTTVANRERNRRVELKVL 563
>gi|26249224|ref|NP_755264.1| hypothetical protein c3389 [Escherichia coli CFT073]
gi|227888360|ref|ZP_04006165.1| OmpA family membrane protein [Escherichia coli 83972]
gi|301049415|ref|ZP_07196377.1| OmpA family protein [Escherichia coli MS 185-1]
gi|26109631|gb|AAN81834.1|AE016765_236 Hypothetical protein c3389 [Escherichia coli CFT073]
gi|227834629|gb|EEJ45095.1| OmpA family membrane protein [Escherichia coli 83972]
gi|300298792|gb|EFJ55177.1| OmpA family protein [Escherichia coli MS 185-1]
gi|307554790|gb|ADN47565.1| OmpA family protein [Escherichia coli ABU 83972]
Length = 550
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ + T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 535 VEISLVPRSD 544
>gi|220935396|ref|YP_002514295.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein-like protein [Thioalkalivibrio sp.
HL-EbGR7]
gi|219996706|gb|ACL73308.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein-like protein [Thioalkalivibrio sp.
HL-EbGR7]
Length = 181
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 62/182 (34%), Gaps = 12/182 (6%)
Query: 2 IKELGLSMFIMTTISGCG--LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+ L + + + + C E+ S + LD+ L
Sbjct: 4 MLRLAVILMLALVLGACARATKPGEEPAPGTDPSMRPVPDSGIEALPLDRDGMLGMDALS 63
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
D ++ + ++ +F ++ L + P+ + + HTD
Sbjct: 64 DPASPLANR---------IIYFEFDRSDIKPEFEEVIIAHGRFLAQNPNMQVRAEGHTDE 114
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + + RA ++ L+ + + I V + + P+ + N+R+E
Sbjct: 115 RGTREYNLGLGERRAQAVQRMLMLQ-GARADQIQVVSYGEEMPVAFGRDEESWAQNRRVE 173
Query: 180 IQ 181
+
Sbjct: 174 LV 175
>gi|302339235|ref|YP_003804441.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301636420|gb|ADK81847.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 340
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATI 102
G+ E+ ++ +++ + + + + +SF L + L IA+I
Sbjct: 202 GALPSPPEEMSDEEVAYFRMLLDSLHNEVVVLVTSTLSFKPDSAELTPESGEELSRIASI 261
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
L K + I HT +G + +S +RA+ +K L+ R +SV+G+ P
Sbjct: 262 LKK-KRIEVEIAGHTADVGDRASQYTLSLQRAESVKRTLVSL-GVKERRLSVKGYGGSRP 319
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
I +ND++ GR N+R+E +
Sbjct: 320 IASNDSQEGRAQNRRVEFLV 339
>gi|296272285|ref|YP_003654916.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM
7299]
gi|296096460|gb|ADG92410.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299]
Length = 343
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
+ + D N SLD+ D + G V ++G + + + ++
Sbjct: 197 VEEPKVLDSDNDGVIDSLDQCPDTMR------GANVDKVGCIKMLDL-EVHFPIDSSIID 249
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+K+ ++ A LNK P I+ HTD GT K NL +S+ RA+ L + V
Sbjct: 250 EKYKHRIKEFAEFLNKHPKLKATIEGHTDYTGTKKYNLWLSKRRANSAFEALKKYDVDPA 309
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
R ++ G+ PI TN TK GR N+RIE +
Sbjct: 310 RLKTI-GYGETRPIATNKTKEGRAKNRRIEATV 341
>gi|152994404|ref|YP_001339239.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
gi|150835328|gb|ABR69304.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
Length = 359
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 64/167 (38%), Gaps = 4/167 (2%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-- 77
+ + + + S + AE + + + + P
Sbjct: 188 TPVEQTSYTQVEPAAQPQQATQPEVISSEPAEQVQEEPITASPMAEETTQQPEIVAEPPG 247
Query: 78 --VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+++ +E+KF P ++ IA L + P + + I+ HTD+ G N +S++RA
Sbjct: 248 KINIQFGLNKTNVEQKFYPEIEKIAIFLKENPGSTVMIEGHTDNSGAASYNQKLSEKRAK 307
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I L S + G+ + P NDT+ R+ N+R+ I
Sbjct: 308 AIAEVLTNTFEISATRVEAIGYGEERPFVENDTEAHREANRRVVAII 354
>gi|95929859|ref|ZP_01312600.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
gi|95134155|gb|EAT15813.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
Length = 246
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 5/135 (3%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
D I V + + I + F L+ P+L +A ++ P I+ HTD
Sbjct: 99 DPSIKVVKDRGAVILQINDSILFAPGSSTLKPAAFPVLAKVAELIRPLP-LSARIEGHTD 157
Query: 119 SIGT---LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
I +N +S R+ + Y + + +S G+ + P+ ND+ R N
Sbjct: 158 DIPFGRADMSNWDLSVARSVSVLKYFQKNDLLPLNRMSAVGYGAEKPLVPNDSPENRAKN 217
Query: 176 QRIEIQIFPRGNIKK 190
+R+E + G+ ++
Sbjct: 218 RRVEFVLESLGDYRE 232
>gi|85058865|ref|YP_454567.1| peptidoglycan-associated outer membrane lipoprotein [Sodalis
glossinidius str. 'morsitans']
gi|84779385|dbj|BAE74162.1| peptidoglycan-associated lipoprotein [Sodalis glossinidius str.
'morsitans']
Length = 170
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 17/181 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ +M I+ C T + +S D+ +LQ
Sbjct: 6 VLKGLMLAVPVM-AIAACSSHKSANNGDESAMGAGTGMDMNGNNASSDEQARLQMQELQR 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + + +F ML A L PS + ++ H D
Sbjct: 65 NNI---------------VYFDLDKYDILSEFAQMLDAHANFLRSNPSYKVTVEGHADER 109
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q I++ + + P + N+R +
Sbjct: 110 GTPEYNIALGERRANAV-KMYLQGKGVYADQIAIVSYGKEKPAVLGHDESAYAKNRRAVL 168
Query: 181 Q 181
Sbjct: 169 V 169
>gi|300980597|ref|ZP_07175094.1| OmpA family protein [Escherichia coli MS 45-1]
gi|300409214|gb|EFJ92752.1| OmpA family protein [Escherichia coli MS 45-1]
gi|315293784|gb|EFU53136.1| OmpA family protein [Escherichia coli MS 153-1]
Length = 550
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ + T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 535 VEISLVPRSD 544
>gi|255533363|ref|YP_003093735.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255346347|gb|ACU05673.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 282
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + ++ + ++ + + K L IA I+ + + I+ +TD++
Sbjct: 138 VDVQVLKGVVYISLSDNMLYKSGSYEILPKAGETLSKIAKIIKDYRDYDVLIEGNTDNVP 197
Query: 122 TL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+NN +S RA + L + ++ G P+ NDT+ G+ N+R
Sbjct: 198 ISMVNIRNNWDLSALRASSVVQALQNTYGVDPKRLTAGGRGEYNPLAANDTEAGKAKNRR 257
Query: 178 IEIQIFPR 185
+I I P+
Sbjct: 258 TQIIITPK 265
>gi|227538150|ref|ZP_03968199.1| possible outer membrane protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227241993|gb|EEI92008.1| possible outer membrane protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 628
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+EF+ ++ I V + + +++ L L + L + P
Sbjct: 501 NEEFEARILLKPIEVDKN-----VVLNNIFFALNKYDLLPSSKSDLNTLVLFLQENPLIR 555
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I I HTD+ G + N +S RA + +YLI RG+S+NR + +G+ P+ TNDT+
Sbjct: 556 IEIGGHTDNTGNDQLNKTLSDNRAKAVVTYLIARGISANRLL-AKGYGSNQPLATNDTET 614
Query: 171 GRQNNQRIEIQIF 183
G+ N+R E +I
Sbjct: 615 GKALNRRTEFKII 627
>gi|126729072|ref|ZP_01744886.1| OmpA/MotB [Sagittula stellata E-37]
gi|126710062|gb|EBA09114.1| OmpA/MotB [Sagittula stellata E-37]
Length = 297
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 69 GDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G + + V F L L +A + + + HTD+ G+ NL
Sbjct: 182 GSALRFTLDGAVLFAHDSSDLMPDAKAALDELAAQIADANLSAFRVVGHTDATGSDAYNL 241
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+SQERA ++ Y V +N IS G P+ +N+T+ GR+ N+R+EI
Sbjct: 242 TLSQERAAAVRDYYASMDVLTNVSISSEGRGESNPLASNETEEGREQNRRVEII 295
>gi|320182433|gb|EFW57330.1| Putative outer membrane lipoprotein [Shigella boydii ATCC 9905]
Length = 550
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 535 VEISLVPRSD 544
>gi|255305283|ref|ZP_05349455.1| chemotaxis protein [Clostridium difficile ATCC 43255]
Length = 231
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 64/173 (36%), Gaps = 13/173 (7%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+G + + + L ND + + +D+ + V I
Sbjct: 65 TGSSTSEKSPIESVLVDKNDKSNLKQD-------LKDKVNNSNLQNSVTVKDDSRGILLE 117
Query: 76 IPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLIS 130
+ + F S L+ L + ++ + I I+ HTD++ T ++N +S
Sbjct: 118 LDDSILFDSGISELKADSKATLNKVYDMIKMIKN-KIVIEGHTDNVPVKSSTHESNWDLS 176
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + Y ++ + S G P+ +N+T GR N+R+ I I
Sbjct: 177 SSRAVSVVRYFVEEKGMDPKLFSATGCGEYQPLVSNETAKGRAENRRVNILIT 229
>gi|289208360|ref|YP_003460426.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288943991|gb|ADC71690.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 305
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 59/149 (39%), Gaps = 7/149 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLI 99
+ D+ E ++D + VSR + I + F L + +L +
Sbjct: 123 EALAEVADELEMAMAPLIEDGDLRVSREAYWLEIEITSRLLFGSGSATLNPEARSLLDEV 182
Query: 100 ATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
IL + + ++ HTD++ +N +S RA + S + +
Sbjct: 183 GAILAPR-VSRVHVEGHTDNVPIQTAVYPSNWELSSGRAAAVVSVFEDA-GIEPKNLVAL 240
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G+ P+ +NDT+ GR N+R+ I + P
Sbjct: 241 GYGEHRPVASNDTEQGRAENRRVAIVVLP 269
>gi|159025748|emb|CAO02048.1| outer membrane protein A [Bordetella holmesii]
Length = 163
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + +L +A I HTDSIGT NL +S RA +
Sbjct: 57 DTFFDFDKSVLKPEGRQLLDQVAQQAKAIDLETIIAVGHTDSIGTEAYNLKLSDRRAASV 116
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + I G PI TN T GR N+R+EI+I
Sbjct: 117 KAYLVSK-GIDPNRIYTEGKGEAQPIATNKTAEGRARNRRVEIEIV 161
>gi|117625045|ref|YP_854033.1| putative outer membrane protein [Escherichia coli APEC O1]
gi|115514169|gb|ABJ02244.1| putative outer membrane protein [Escherichia coli APEC O1]
Length = 537
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ + T + + V + L+ +L + P +I + +T
Sbjct: 402 PEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 461
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 462 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 521
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 522 VEISLVPRSD 531
>gi|110642959|ref|YP_670689.1| OmpA family membrane protein [Escherichia coli 536]
gi|191171277|ref|ZP_03032827.1| OmpA domain protein [Escherichia coli F11]
gi|300976455|ref|ZP_07173440.1| OmpA family protein [Escherichia coli MS 200-1]
gi|110344551|gb|ABG70788.1| putative OmpA-family membrane protein [Escherichia coli 536]
gi|190908577|gb|EDV68166.1| OmpA domain protein [Escherichia coli F11]
gi|300308536|gb|EFJ63056.1| OmpA family protein [Escherichia coli MS 200-1]
gi|324015357|gb|EGB84576.1| OmpA family protein [Escherichia coli MS 60-1]
Length = 550
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ + T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 535 VEISLVPRSD 544
>gi|239905020|ref|YP_002951759.1| hypothetical protein DMR_03820 [Desulfovibrio magneticus RS-1]
gi|239794884|dbj|BAH73873.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 424
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 61/148 (41%), Gaps = 5/148 (3%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQL 98
+ ++ D + + ++ I V + + + + F + + +L
Sbjct: 76 TEELQTAYDALVADLRGEVDSRQIRVRQFREKLEINFVDKILFPSGSAEISPRGRDILTR 135
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISV 154
+ +L K I + HTD++ +N +S RA + +L + G + +
Sbjct: 136 VGAVLAKVKDKSIYVVGHTDNVPIHSALFPSNWELSASRAASVIRHLSESGGLAPERFTA 195
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G A+ P+ +N T GRQ N+R++I +
Sbjct: 196 MGRAFYQPVASNATPEGRQENRRVDIIV 223
>gi|224369820|ref|YP_002603984.1| OmpA2 [Desulfobacterium autotrophicum HRM2]
gi|223692537|gb|ACN15820.1| OmpA2 [Desulfobacterium autotrophicum HRM2]
Length = 503
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G V+ +G I + + ++ ++ L +A IL K P+ I +Q HTD+IG
Sbjct: 385 GANVNDLGCWILAEL---LFDYNKADIKPTSFDELDNVAMILKKNPALKIDLQGHTDNIG 441
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ +S +R+ +K+YL+ + + + GF + P+DTN TK GR N+R+E+
Sbjct: 442 SKNFNMKLSLKRSAAVKTYLVSK-GVPSERLKTEGFGFSRPVDTNKTKEGRAKNRRVELL 500
>gi|306812301|ref|ZP_07446499.1| OmpA family membrane protein [Escherichia coli NC101]
gi|305854339|gb|EFM54777.1| OmpA family membrane protein [Escherichia coli NC101]
Length = 550
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ + T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 535 VEISLVPRSD 544
>gi|213163752|ref|ZP_03349462.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
Length = 196
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 36/197 (18%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGS--------- 45
M K + + I +SGC ++ + +V G+
Sbjct: 1 MKKRVFVIAAIVSGALAVSGCTTNPYTGEREAGKSGIGAGIGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G+ N+ +SQ+RAD + S LI +G
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGSHDLNMRLSQQRADSVASSLITQG 180
Query: 146 VSSNRFISVRGFAYKYP 162
V ++R I G P
Sbjct: 181 VDASR-IRTSGMGPANP 196
>gi|195953009|ref|YP_002121299.1| OmpA/MotB domain protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932621|gb|ACG57321.1| OmpA/MotB domain protein [Hydrogenobaculum sp. Y04AAS1]
Length = 271
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 10/155 (6%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQL 98
+ L + E + Q + V + I + V F ++ K+ +L
Sbjct: 84 GQYINMQLKRIEQMLKKQGLEGKFKVKLVPQGIKLILQDTVLFKSGSADIDPKYYSLLDS 143
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISV 154
I I++ P+ I I TD+ +N +S +RA + Y I +G ++ I +
Sbjct: 144 IYKIISSLPN-PIEIDGFTDNTPIHTLTFPSNWELSTDRAASVAKYFIFKGFDPSK-IKI 201
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
G+ +P+ N T + N+R+EI I NIK
Sbjct: 202 AGYGKYHPLVPNTTPQNKAMNRRVEITIL---NIK 233
>gi|126697829|ref|YP_001086726.1| chemotaxis protein [Clostridium difficile 630]
gi|255099425|ref|ZP_05328402.1| chemotaxis protein [Clostridium difficile QCD-63q42]
gi|115249266|emb|CAJ67079.1| Flagellar motor rotation protein MotB (Chemotaxis protein MotB)
[Clostridium difficile]
Length = 231
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 61/174 (35%), Gaps = 6/174 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
SG + S + + + +D+ + V I
Sbjct: 57 FSGTSIFSTGSSTSEKSPIDSVLVDKNDKSNLEQDLKDKVNNSNLQNSVTVKDDSRGILL 116
Query: 75 YIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
+ + F S L+ L + ++ + I I+ HTD++ T ++N +
Sbjct: 117 ELDDSILFDSGISELKVDSKATLNKVYDMIKMMKN-KIVIEGHTDNVPVKSSTHESNWDL 175
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S RA + Y ++ R S G P+ +N+T GR N+R+ I I
Sbjct: 176 SSSRAVSVVRYFVEEKGMDPRLFSATGCGEYQPLVSNETAKGRAENRRVNILIT 229
>gi|110636612|ref|YP_676819.1| peptidoglycan-associated outer membrane protein [Cytophaga
hutchinsonii ATCC 33406]
gi|110279293|gb|ABG57479.1| peptidoglycan-associated outer membrane protein [Cytophaga
hutchinsonii ATCC 33406]
Length = 239
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ V++ ++ + P + + L P+ I I HTDS G +NL++SQ
Sbjct: 128 IFTLDNVYFDVNKWNIKPECEPAIDNLYNSLTLNPNMHIEIAGHTDSDGDAHDNLVLSQR 187
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ + ++LIQ+G+ R + +G+ PI ND+ + N+R E+++
Sbjct: 188 RAEAVMNHLIQKGLDPKR-VQAKGYGEYKPIAPNDSPQNKYRNRRTEVRVL 237
>gi|19703598|ref|NP_603160.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19713702|gb|AAL94459.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 157
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ +L I + + + I I HTDSIG+ N +S+
Sbjct: 29 IVLDERSLNFDFDKSNVKPQYYDLLNNIKEFVEQN-NYEITIVGHTDSIGSNAYNFKLSR 87
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA+ +K+ L++ G+S +R + + + PI TN TK GR N+R+E ++ R ++
Sbjct: 88 RRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRETVQ 145
>gi|118616129|ref|YP_904461.1| outer membrane protein a OmpA [Mycobacterium ulcerans Agy99]
gi|118568239|gb|ABL02990.1| outer membrane protein a OmpA [Mycobacterium ulcerans Agy99]
Length = 332
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 3/172 (1%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL--QDTGIVVSRIGD 70
T++G + +K V ++ VN + TG
Sbjct: 161 ITLTGTAASPDQKDAVRSAATSVWPDVNVENQIEVKGQPAGSTPPTGPAATGACADLQAA 220
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ V L +L + L P + + +TD+ G+ N+ +S
Sbjct: 221 VTALTGGAIAFGNDGVSLTPDSNKVLTQVVDKLRACPDAKVTVNGYTDNSGSEGLNIPLS 280
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+RA + +L+ + I+ +G PI +NDT GR N+R+EI +
Sbjct: 281 AQRAQTVADFLVA-HGVATDHITAKGLGSANPIASNDTAEGRIKNRRVEIVV 331
>gi|193065118|ref|ZP_03046192.1| OmpA domain protein [Escherichia coli E22]
gi|194426303|ref|ZP_03058858.1| OmpA domain protein [Escherichia coli B171]
gi|260845464|ref|YP_003223242.1| putative outer membrane lipoprotein [Escherichia coli O103:H2 str.
12009]
gi|192927249|gb|EDV81869.1| OmpA domain protein [Escherichia coli E22]
gi|194415611|gb|EDX31878.1| OmpA domain protein [Escherichia coli B171]
gi|257760611|dbj|BAI32108.1| predicted outer membrane lipoprotein [Escherichia coli O103:H2 str.
12009]
Length = 550
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 535 VEISLVPRSD 544
>gi|91212188|ref|YP_542174.1| hypothetical protein UTI89_C3194 [Escherichia coli UTI89]
gi|218559806|ref|YP_002392719.1| hypothetical protein ECS88_3087 [Escherichia coli S88]
gi|91073762|gb|ABE08643.1| hypothetical protein UTI89_C3194 [Escherichia coli UTI89]
gi|218366575|emb|CAR04328.1| conserved hypothetical protein; putative membrane protein
[Escherichia coli S88]
gi|294493880|gb|ADE92636.1| OmpA domain protein [Escherichia coli IHE3034]
gi|307625612|gb|ADN69916.1| hypothetical protein UM146_02475 [Escherichia coli UM146]
gi|315289326|gb|EFU48721.1| OmpA family protein [Escherichia coli MS 110-3]
gi|323951748|gb|EGB47623.1| OmpA family protein [Escherichia coli H252]
gi|323957271|gb|EGB52994.1| OmpA family protein [Escherichia coli H263]
Length = 550
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ + T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 535 VEISLVPRSD 544
>gi|21673470|ref|NP_661535.1| peptidoglycan-associated lipoprotein [Chlorobium tepidum TLS]
gi|21646575|gb|AAM71877.1| peptidoglycan-associated lipoprotein [Chlorobium tepidum TLS]
Length = 170
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 54/180 (30%), Gaps = 18/180 (10%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
G+ M ++GC S V+ S G+
Sbjct: 6 TGIIGAAMIILAGCSSKS---------------AVSTDETSRAGYGSGMGGGTGAGAGVS 50
Query: 65 VSRIGDMITCY--IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V IG I L + L A + K P++ + I+ H D GT
Sbjct: 51 VEDIGQGGKAGSIIGDIFFDFDSSALSSEAQEQLNQNAAWMQKNPTSAVIIEGHCDERGT 110
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ N+ + + RA+ + S +S + + P D + N+R +
Sbjct: 111 DEYNIALGERRAE-AARMYLVNLGVSGGRLSTVSYGEEKPFDPGHNEEAWAKNRRDHFVV 169
>gi|254475411|ref|ZP_05088797.1| OmpA/MotB [Ruegeria sp. R11]
gi|214029654|gb|EEB70489.1| OmpA/MotB [Ruegeria sp. R11]
Length = 627
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 13/174 (7%)
Query: 15 ISGCGLASREKKKVFLH-----KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++G ++ ++ +N + + A+ +L + + +
Sbjct: 435 LTGMSHREDAPTEIAKLLSEKLGEAESYDLNVTYEEPPEPADKPMSPELCEAELAAVQTV 494
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
IT + L IA IL + + IQ HTDS G + N +
Sbjct: 495 SKIT-------FEPGSATVAAGSRDTLDQIADILARCDGVRLEIQGHTDSQGREEMNQNL 547
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
SQ RA + + L R + ++ S +G+ PI TNDT+ GR+ N+RIE ++
Sbjct: 548 SQARAQSVLNELRDRRIVTSS-FSAKGYGESTPIATNDTEEGREANRRIEFRLI 600
>gi|117918603|ref|YP_867795.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117610935|gb|ABK46389.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 487
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 6/132 (4%)
Query: 62 GIVVSRIGDMIT----CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
GI + + D I + + L + P+++++A+ L P + HT
Sbjct: 358 GINLEALTDQIEAKGHVALEGLLFEYDSDKLLPEAQPVVEVLASYLKANPKRAFYVVGHT 417
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G N +SQ RA I L + + G P+ +N + G+Q N+R
Sbjct: 418 DDKGNQAYNQGLSQRRAVAIVKLLTTSHGIQTQQLEAVGIGEHAPVASNSDEAGQQQNRR 477
Query: 178 IEIQIFPRGNIK 189
+E+ + R ++K
Sbjct: 478 VELVL--RSDMK 487
>gi|288942612|ref|YP_003444852.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
180]
gi|288897984|gb|ADC63820.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
Length = 309
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 71/172 (41%), Gaps = 10/172 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLD---KAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
+ + L S + + G + + E+ ++ I + R I I
Sbjct: 108 SPTDVALAALIGSASEEERGRILGEIREMSTELEEAMGSLIEAGNIEIKRQPYWIEVAIN 167
Query: 78 VHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQE 132
++ F LE P+L +A +L + I ++ HTD++ +N +S
Sbjct: 168 SNLLFSSGSATLEPAARPVLARVARLLGRR-DVRIHVEGHTDNLPINNTIYPSNWELSSG 226
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA + + Q G+ R +++ G+ P D+N T+ GR N+R+ + + P
Sbjct: 227 RAATVVNLFAQNGIDPERMVAI-GYGQFQPTDSNATEAGRARNRRVAVIVLP 277
>gi|256829593|ref|YP_003158321.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256578769|gb|ACU89905.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 376
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 8/155 (5%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVS 84
D + +DK D + G+ V G I + + +
Sbjct: 217 DDATAVDPCSLDDDGDGVNNCIDKCPDTIK------GLAVDAAGCPIDDIVTLKINFDFD 270
Query: 85 EVFLEKKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ ++ ++ L A+ + + S TV+ I HTDS+GT + N +S+ RA ++ YL+
Sbjct: 271 KSDIKPEYHQELADFASYMRQQQSFTVVEIAGHTDSVGTDEYNQKLSERRAKAVRDYLVN 330
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S G+ PI TNDT GR N+RI
Sbjct: 331 ELGMDTNLFSAVGYGESKPIATNDTDAGRAENRRI 365
>gi|152996565|ref|YP_001341400.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
gi|150837489|gb|ABR71465.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
Length = 209
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 81/188 (43%), Gaps = 4/188 (2%)
Query: 2 IKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K L +++ + G L++ E +S D + D +
Sbjct: 1 MKTLIKTIALTGTLLVYG-HLSAAESLYASNVQSRLADADRDGVIDARDLCPGTTEGAAV 59
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
D ++ +++ + + + ++++F L+ +A L + P++ + I+ HTDS
Sbjct: 60 DNYGCPNQTTKLLSVEL-NILFDTGKADIKQRFYSELKDLAKFLKEHPASTVVIEGHTDS 118
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N +SQ+RA I L+ + G+ PI NDT+ GR+ N+R+
Sbjct: 119 QGSAELNQELSQQRASAIADVLVDSFRIQADRVKGIGYGATRPIADNDTEDGRKLNRRVV 178
Query: 180 IQIFPRGN 187
++F +
Sbjct: 179 AEVFAKQQ 186
>gi|77163684|ref|YP_342209.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|254435498|ref|ZP_05049005.1| peptidoglycan-associated lipoprotein, putative [Nitrosococcus
oceani AFC27]
gi|76881998|gb|ABA56679.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|207088609|gb|EDZ65881.1| peptidoglycan-associated lipoprotein, putative [Nitrosococcus
oceani AFC27]
Length = 187
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 69/190 (36%), Gaps = 17/190 (8%)
Query: 2 IKELGLSMFIMTT--ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
++ + L + + GC + D+V + G+S + + +
Sbjct: 1 MRLVILFFLLAGIYGLVGCA------GGTATTQGGPPDVVVEERGASPYPEGEALEEESA 54
Query: 60 ---DTGIVVSRIGDMIT-----CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
G + GD + V +++ P+++ L K P +
Sbjct: 55 TTWGIGEGAAYQGDPLADPASPLASRVVYFEFDSSEIQQDDRPIVEAHGGYLAKHPDIKV 114
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
++ HTD G+ + NL + + RA+ + LI +S + V + + P +
Sbjct: 115 TLEGHTDERGSREYNLALGERRANAV-RSLILLMGASEDQVEVVSYGEERPAVDGQDEGA 173
Query: 172 RQNNQRIEIQ 181
Q N+R+EI
Sbjct: 174 WQLNRRVEIL 183
>gi|99078059|ref|YP_611317.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99035197|gb|ABF62055.1| OmpA/MotB [Ruegeria sp. TM1040]
Length = 653
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 2/163 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
S + + + + LD E + + + +
Sbjct: 439 SHVENASAEIARMLSQKLGEAEDYDLDITFEKPPEPEDKLMAPQLCEAELAAIQRADKIA 498
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++ IA +L + + IQ HTDS G + N +SQ RA + +
Sbjct: 499 FEPGSATVAADSARVIDKIAKLLQQCGEIPLEIQGHTDSQGREEMNQNLSQARAQSVLNA 558
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L R + + F+ RG+ PI +NDT+ GR+ N+RIE ++
Sbjct: 559 LRARRILTGSFV-ARGYGEDNPIASNDTEEGREANRRIEFRLI 600
>gi|331684442|ref|ZP_08385034.1| putative OmpA-family membrane protein [Escherichia coli H299]
gi|331078057|gb|EGI49263.1| putative OmpA-family membrane protein [Escherichia coli H299]
Length = 550
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 535 VEISLVPRSD 544
>gi|149919402|ref|ZP_01907883.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149819708|gb|EDM79133.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 182
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 74/181 (40%), Gaps = 21/181 (11%)
Query: 5 LGLSMFIMTTISGCG-LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+G+++ + ++ CG +A + + + + + + K E
Sbjct: 11 VGVALSLGMLLTACGPIAFNDSIRYASAPTAEPAPEPEPPQTGHAKLE------------ 58
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGT 122
GD I + + +L +A ++N P ++ I HT + G+
Sbjct: 59 -----GDHIIID-GKIHFAHDSAEILEDSFEILDDVAEVMNAHPELPMLDIIGHTSTEGS 112
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K+N+ +S RA + YL GV ++R ++ G PI T+ G++ N+R+E +I
Sbjct: 113 DKHNMELSTARAKAVADYLAGHGVDASR-VTSEGKGETEPIADESTEEGKRQNRRVEFKI 171
Query: 183 F 183
Sbjct: 172 I 172
>gi|120612058|ref|YP_971736.1| OmpA domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120590522|gb|ABM33962.1| OmpA domain protein [Acidovorax citrulli AAC00-1]
Length = 181
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 66/184 (35%), Gaps = 16/184 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASR-----EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
K + L++ + ++GC + + K + D + S + +
Sbjct: 6 FKRISLALTVAALMAGCSSGVKLEDVPVENKGATSTAPDGANSSGNSQSGVAPVDLNQSA 65
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + V+RI ++ ++ +++ A + + I+ H
Sbjct: 66 RDAAGPVGVARI----------VYFDFDSYVVKPEYQSLIEQHARFIKASQGRKVMIEGH 115
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD G + NL + Q+RA+ ++ + + F + P +T+ N+
Sbjct: 116 TDDRGGREYNLALGQKRAEAVRR-ALGLLGVPEAQMEAVSFGKEKPAVQGNTEDAFSQNR 174
Query: 177 RIEI 180
R+E+
Sbjct: 175 RVEL 178
>gi|78043824|ref|YP_359811.1| flagellar motor protein MotB [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995939|gb|ABB14838.1| flagellar motor protein MotB [Carboxydothermus hydrogenoformans
Z-2901]
Length = 266
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 9/170 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G AS+E+ K + +D + + + + + +
Sbjct: 83 GKASQEQLPAVDEKDLKETANLALIKAKVDSY---IKAKGLNASVTATLEERGVVISFKD 139
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQER 133
+ F L + +++ I IL P+ I I+ HTD++ + N +S R
Sbjct: 140 AILFKLGSAELTPQAKAIVRQIGEILLPLPNY-IRIEGHTDNLPINTSRFPSNWELSTAR 198
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + LI +S G+ P N ++ RQ N+R++I I
Sbjct: 199 ATSVVHELIDGLHFPPYRLSAVGYGEYRPKVPNTSEQNRQKNRRVDIVIL 248
>gi|332668302|ref|YP_004451090.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM
1100]
gi|332337116|gb|AEE54217.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 1170
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
RI + I V + ++ F+P+L + L P ++ + HT+ + +
Sbjct: 1051 RIRNGQAIRIEQLQFDVDSINIKSSFIPILDEVFEFLTDNPGIIVEVGGHTNGLCQDEFC 1110
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +S RA + YLI++ + + +G+ PI TN T GRQ NQR+EI+I
Sbjct: 1111 IRLSTARAKSVAEYLIKK-GIDAKRVQFKGYGRSVPIATNSTPEGRQKNQRVEIKIV 1166
>gi|296282963|ref|ZP_06860961.1| outer membrane protein [Citromicrobium bathyomarinum JL354]
Length = 214
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDM--ITCYIPVHVSF-VSEVFLEKKFLPMLQLIA 100
G D E Q +G+ V IGD I +P V+F + + F L +A
Sbjct: 59 GDQFDDQIRELDEQTAGSGVDVEEIGDQDAILVRLPDGVTFATNSANINPSFQRTLDTVA 118
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ ++P+++I + TD+ G+ N +S++RA + +YL+ +GVS R I+ RG+
Sbjct: 119 QSMIRYPNSLIDVYGFTDTTGSPSYNQQLSEQRAQAVANYLVSQGVSRAR-IATRGYGED 177
Query: 161 --YPIDTNDTKVGRQNNQRIEIQIFP 184
Y V N+R+EI+I P
Sbjct: 178 PQYLRVRTGDNVNEPLNRRVEIKIVP 203
>gi|126664582|ref|ZP_01735566.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
gi|126630908|gb|EBA01522.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
Length = 373
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 3/165 (1%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C R K D+D +D V + D
Sbjct: 208 CPNTPRGAKVDAKGCELDSDKDGVVDSKDKCPNTAAGMKVDKDGCEGVVKTIDTFEI--- 264
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ + + ++ +A L +T + I HTDS G N +S+ RA +
Sbjct: 265 DVQFPLNSAEIGAAYDSQIRRVADALRANSTTYVEIAGHTDSTGAAAYNQDLSERRAAAV 324
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L + +S +G+ PI +N T GR N+R+E +I
Sbjct: 325 ANRLTSTLDVNPDRVSSKGYGEAEPIASNSTDAGRAANRRVEARI 369
>gi|320354327|ref|YP_004195666.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320122829|gb|ADW18375.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
Length = 248
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 66/165 (40%), Gaps = 6/165 (3%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV-VSRIGDMITCYIPVHVSFV-SEVFL 88
K+ T I + + +++ ++ + V + D I I V F + L
Sbjct: 75 PKAKFTPIPRETAVPRFKRIKNDLELAKLQAQVEAVQQDNDSIILRIHESVLFDEGQATL 134
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL---KNNLLISQERADVIKSYLIQRG 145
P+L+ +A I+ P + I+ HTDS +N +S RA + S+ +
Sbjct: 135 NPASYPILRKVADIIRPLP-MSMRIEGHTDSTPMAGATTSNWDLSVARAVAVMSFYHRGE 193
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + +S G+ P+ N TK N+R++ + + +
Sbjct: 194 LFALDRMSAAGYGDTRPLAPNTTKDNMAKNRRVDFVLRSNRTVAE 238
>gi|227114918|ref|ZP_03828574.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 170
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 62/181 (34%), Gaps = 17/181 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + ++ C + + + S + +LQ
Sbjct: 6 VLKGLMLALPV-LAVAACSSNKNADNDQSSMGTAGNNGMMDGGNMSSSEQARLQMQELQR 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + + +F ML A L PS + I+ H D
Sbjct: 65 NNI---------------VYFGLDKYDVSSEFAQMLDAHAAFLRSNPSYKVTIEGHADER 109
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S+ IS+ + + P + N+R +
Sbjct: 110 GTPEYNIALGERRANAV-QMYLQGKGVSSDQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 168
Query: 181 Q 181
Sbjct: 169 V 169
>gi|118419991|gb|ABK88265.1| outer membrane protein CD [Moraxella catarrhalis]
Length = 427
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 4/163 (2%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
++ + + D LD + G V
Sbjct: 249 EEAPAVIEDIVVDSDGDGVPDHLDACPGTPVNTVVDPRGCPVQVNLVEELRQELRVFFDY 308
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL---KNNLLISQERADVIKSY 140
+ ++ ++ + +A + +FP+ I+ H + N +S+ RA+ +KS
Sbjct: 309 DKSIIKPQYREEVAKVAAQMREFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSM 368
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L + ++ G+ + PI N T G+ N+R+E I
Sbjct: 369 LSNEFGIAPNRLNAVGYGFDRPIAPNTTAEGKAMNRRVEAVIT 411
>gi|300715167|ref|YP_003739970.1| OmpA family protein [Erwinia billingiae Eb661]
gi|299061003|emb|CAX58110.1| OmpA family protein [Erwinia billingiae Eb661]
Length = 412
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 54/139 (38%), Gaps = 7/139 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPS 108
+ + +++ + V D + F S + ++ +L IA +N
Sbjct: 259 LKAFLRPEIEQGLVAVKDEADQSVVTLKGDGLFTSASTSVRGRYEEVLDRIAQAMNNVNG 318
Query: 109 TVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I + ++D++ +N +S RA + +Q+ +S + + G P+
Sbjct: 319 -RILVIGYSDNVPIRSARFASNYELSLARAQSV-QERLQQHLSQPQRVKAEGRGESNPLV 376
Query: 165 TNDTKVGRQNNQRIEIQIF 183
N T R N+R++I +
Sbjct: 377 PNTTAENRARNRRVDITLL 395
>gi|34763480|ref|ZP_00144424.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27886853|gb|EAA23981.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 157
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ +L+ I + + + I I HTDSIG+ N +S+
Sbjct: 29 IVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQN-NYEITIVGHTDSIGSNAYNFKLSR 87
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA+ +K+ L++ G+S +R + + + PI TN TK GR N+R+E ++ R ++
Sbjct: 88 RRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRETVQ 145
>gi|110638581|ref|YP_678790.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281262|gb|ABG59448.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 694
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T + + L K+ L ++ + + I I HTD++G N +S+
Sbjct: 583 TIRLNNLFFDTGKSDLRKESYAELNRTVELMKLYLTMTIEISGHTDNVGGDAENQTLSEN 642
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + +YL+ G+ ++R S +G+ P+ TNDT GRQ N+R++ I
Sbjct: 643 RAKAVVNYLVSHGIDASRVQS-KGYGKTKPVSTNDTDHGRQLNRRVDFTII 692
>gi|326561460|gb|EGE11810.1| outer membrane protein CD [Moraxella catarrhalis 46P47B1]
gi|326562231|gb|EGE12559.1| outer membrane protein CD [Moraxella catarrhalis 7169]
gi|326567185|gb|EGE17307.1| outer membrane protein CD [Moraxella catarrhalis BC1]
gi|326568467|gb|EGE18547.1| outer membrane protein CD [Moraxella catarrhalis BC7]
gi|326572021|gb|EGE22023.1| outer membrane protein CD [Moraxella catarrhalis BC8]
gi|326574959|gb|EGE24889.1| outer membrane protein CD [Moraxella catarrhalis 101P30B1]
Length = 453
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 4/163 (2%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
++ + + D LD + G V
Sbjct: 275 EEAPAVIEDIVVDSDGDGVPDHLDACPGTPVNTVVDPRGCPVQVNLVEELRQELRVFFDY 334
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL---KNNLLISQERADVIKSY 140
+ ++ ++ + +A + +FP+ I+ H + N +S+ RA+ +KS
Sbjct: 335 DKSIIKPQYREEVAKVAAQMREFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSM 394
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L + ++ G+ + PI N T G+ N+R+E I
Sbjct: 395 LSNEFGIAPNRLNAVGYGFDRPIAPNTTAEGKAMNRRVEAVIT 437
>gi|298369093|ref|ZP_06980411.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298283096|gb|EFI24583.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 417
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 6/139 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V D T I + ++ ++ P+L + LN
Sbjct: 252 RLRPLLENEIARKLVSVKDDPDRSTVTILGDGLFESGSTSIQDQYYPVLAAVGQALNSV- 310
Query: 108 STVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +TD+ +N +SQ RAD +K L+ + I G P+
Sbjct: 311 DGQVVVTGYTDNTPIQSLEYPSNWHLSQGRADAVKEILLSYMRNGANRIRSEGRGSTNPV 370
Query: 164 DTNDTKVGRQNNQRIEIQI 182
ND+ + N+R+EI +
Sbjct: 371 APNDSPENKAKNRRVEITL 389
>gi|262195177|ref|YP_003266386.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262078524|gb|ACY14493.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 490
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 65/172 (37%), Gaps = 7/172 (4%)
Query: 18 CGLASREKKKVFL-----HKSNDTDIVNKRFGSSLDKAEDEFQ-MQLQDTGIVVSRIGDM 71
C ++ + + ND D + +++ E +
Sbjct: 292 CSDSAEDPDGFADEDGCPDEDNDGDGIVDAADQCMNEPETANGYQDGDGCPDEIPEEVKN 351
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
T I + + +L A IL ++P + I H+D G N+ +S+
Sbjct: 352 YTGSIEGIRFANNSDRILPVSRKVLDEAARILVEYPDLRVEISGHSDDRGKRDFNIDLSK 411
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ ++ YL+ +GV +R +S GF P+ N + R N+R+E +
Sbjct: 412 RRAEAVRVYLVGKGVEDSRLVS-MGFGPDRPLVENTSNANRAKNRRVEFNLI 462
>gi|296113910|ref|YP_003627848.1| outer membrane protein CD [Moraxella catarrhalis RH4]
gi|149757|gb|AAA66180.1| outer membrane protein CD [Moraxella catarrhalis]
gi|45685720|gb|AAS75593.1| OmpCD [Moraxella catarrhalis O35E]
gi|295921604|gb|ADG61955.1| outer membrane protein CD [Moraxella catarrhalis RH4]
gi|326560587|gb|EGE10968.1| outer membrane protein CD [Moraxella catarrhalis 103P14B1]
gi|326573968|gb|EGE23918.1| outer membrane protein CD [Moraxella catarrhalis O35E]
Length = 453
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 4/163 (2%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
++ + + D LD + G V
Sbjct: 275 EEAPAVIEDIVVDSDGDGVPDHLDACPGTPVNTVVDPRGCPVQVNLVEELRQELRVFFDY 334
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL---KNNLLISQERADVIKSY 140
+ ++ ++ + +A + +FP+ I+ H + N +S+ RA+ +KS
Sbjct: 335 DKSIIKPQYREEVAKVAAQMREFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSM 394
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L + ++ G+ + PI N T G+ N+R+E I
Sbjct: 395 LSNEFGIAPNRLNAVGYGFDRPIAPNTTAEGKAMNRRVEAVIT 437
>gi|146344294|ref|YP_001202150.1| hypothetical protein pQBR0404 [Pseudomonas fluorescens SBW25]
gi|146188106|emb|CAM96436.1| hypothetical protein pQBR0404 [Pseudomonas fluorescens SBW25]
Length = 220
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 80/216 (37%), Gaps = 36/216 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKK-------VFLHKSNDTDIVNKRFG--------- 44
+IK L++ ++GC + + ++ I+ G
Sbjct: 4 VIKAAALALCFAI-VTGCSVNPQTGEREFNRTAIGTTIGGVAGGILGAAVGGERGALVGI 62
Query: 45 -----------SSLDKAEDEFQMQLQDTGIVVSRIGDMIT------CYIPVHVSFVS-EV 86
+DK + + +L+ G+ + D +T P ++F +
Sbjct: 63 AAGAALGGGTGYWMDKRSAKLKEELRQKGMDATTSLDPVTGRQMMTIEAPADIAFATASA 122
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
L+ L IAT L + I HTD G+ + N ++S RA + +
Sbjct: 123 DLQPAAFQGLSAIATALKDQKDLRLEITGHTDGTGSRQFNNVLSYARAQAVAQ-YLYAAG 181
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I+VRG P+ T+ T GR N+R+EIQI
Sbjct: 182 VPAQVIAVRGVGPSMPVATDATTQGRAQNRRVEIQI 217
>gi|187250732|ref|YP_001875214.1| outer membrane protein [Elusimicrobium minutum Pei191]
gi|186970892|gb|ACC97877.1| Outer membrane protein [Elusimicrobium minutum Pei191]
Length = 174
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 72/186 (38%), Gaps = 20/186 (10%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K ++ L + + ++GC + + + V K + Q
Sbjct: 1 MKFIKVILVLALFIGVAGCSSEPKRDENGY---------VADPIIEKERKRNARLEKQTS 51
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + IP V L P+L +A + + ++ HTD+
Sbjct: 52 EEMFASRQ--------IPSVNFEFDSVHLAASAYPILDKVAGFMVGRQHIKLIVEGHTDN 103
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+G+ + N +S+ RA +KSY++ R I V GF + P+ +D+ GR N+RI
Sbjct: 104 VGSDEYNDWLSEARAIAVKSYIVSR-GVHPDSIKVYGFGKRRPLTLDDSIEGRATNRRIV 162
Query: 180 IQIFPR 185
+ R
Sbjct: 163 FTVTDR 168
>gi|304438419|ref|ZP_07398359.1| flagellar motor protein MotB [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368502|gb|EFM22187.1| flagellar motor protein MotB [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 306
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 67/179 (37%), Gaps = 11/179 (6%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIG 69
SG G ++ ++ D + + L +A+ + +Q +
Sbjct: 65 FFSGMGPSTSMSSATVTTGADTADAAYMKENNDLSEAKAKLDQYIQENNLQDQVSTELNE 124
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + + F L+ ++ +IA +L+ P + I HTD++
Sbjct: 125 EGLMIRLKERALFASGSAALQGDAERIVPVIAGVLSSLPE-RVTISGHTDNVPIATAQYP 183
Query: 129 I-----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S +++ + + + S G++ PI +NDT+ GR N+R+E+ I
Sbjct: 184 SNWELSSARAVSLMRGVMAVQPSLNPARFSALGYSEYRPIASNDTEEGRAQNRRVEVFI 242
>gi|56551062|ref|YP_161901.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241761362|ref|ZP_04759450.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753277|ref|YP_003226170.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|56542636|gb|AAV88790.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374269|gb|EER63766.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552640|gb|ACV75586.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 176
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 78/187 (41%), Gaps = 13/187 (6%)
Query: 1 MIK-ELGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K +L +S+F ++ C + K L + T + D +
Sbjct: 1 MTKSKLTISLFAGLVALTACS--DHQPKTASLPPAPTTKAPAPTSNGNADV------GAV 52
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+DT + S + + ++ L+ + +L K+PST + I+ H D
Sbjct: 53 RDTVVPGSHADFLRQVGTDMVHFALNSHDLDSEAKAILDREIQWFKKYPSTRVTIEGHCD 112
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N+ + ++RAD ++ YL + GV+++ I+V + + P+ + N+R
Sbjct: 113 ERGTREYNIALGEKRADAVRDYLAKAGVANS--INVISYGKERPLAMGSDEESWAQNRRA 170
Query: 179 EIQIFPR 185
+ + P
Sbjct: 171 -VTVTPN 176
>gi|317402977|gb|EFV83516.1| outer membrane protein A [Achromobacter xylosoxidans C54]
Length = 197
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + +L +A I HTDSIGT N +S+ RA +
Sbjct: 89 DTFFDFDKSTLKPEGRQLLDQVAQQARGIELETIIAVGHTDSIGTDAYNQKLSERRAASV 148
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + I G K PI +N TK GR N+R+EI+I
Sbjct: 149 KAYLVSK-GIDPNRIYTEGKGEKNPIASNKTKEGRAQNRRVEIEIV 193
>gi|294498805|ref|YP_003562505.1| chemotaxis protein MotB [Bacillus megaterium QM B1551]
gi|294348742|gb|ADE69071.1| chemotaxis protein MotB [Bacillus megaterium QM B1551]
Length = 277
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 6/177 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
AS + + + + K + + + S + + I
Sbjct: 101 SPASSQSLTSEQKEQTIREADQEELQQIQSKINAYIKKKNLTNQLQTSLTEEGLLISIRD 160
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQER 133
+V F + + + I+ +L P I I HTD++ ++N +S R
Sbjct: 161 NVLFDSGRAQVRSEDTKIANDISELLVIDPPRNIIISGHTDNVPIRNAGFESNWELSVMR 220
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A +++ + S +GF P+ +N+T G+ N+R+EI I PR IK+
Sbjct: 221 AVNFMKVILKNDKLNPSMFSAKGFGEFKPVTSNNTAEGQAKNRRVEILITPR-TIKQ 276
>gi|237741116|ref|ZP_04571597.1| outer membrane protein [Fusobacterium sp. 4_1_13]
gi|229430648|gb|EEO40860.1| outer membrane protein [Fusobacterium sp. 4_1_13]
Length = 144
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ +L+ I + + + I IQ HTDSIG+ N +S+
Sbjct: 19 IVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQN-NYEITIQGHTDSIGSNAYNFKLSR 77
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
RA+ +K+ L++ G++ +R + + + PI TN+TK GR N+R+E ++ R N
Sbjct: 78 RRAESVKAKLLEFGLAEDRIVGIEAMGEEQPIATNETKEGRAQNRRVEFKLVQREN 133
>gi|304309686|ref|YP_003809284.1| outer membrane porin f precursor [gamma proteobacterium HdN1]
gi|301795419|emb|CBL43617.1| outer membrane porin f precursor [gamma proteobacterium HdN1]
Length = 353
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Query: 61 TGIVVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
G V G + + + + ++ +Q IA + K+P + I+
Sbjct: 219 AGAKVDANGCELVKTVMESIRLNVQFATGSSAVAPRYHAEVQKIADFMKKYPDLTVTIEG 278
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD+ G N +S RA+ ++ L+ R + ++ G+ P+ +N T GRQ N
Sbjct: 279 HTDNTGGAALNERLSSARANSVREELVNRFGVAANRVTSVGYGPSRPVASNATAAGRQEN 338
Query: 176 QRIEIQI 182
+R+ +
Sbjct: 339 RRVVAVL 345
>gi|114797292|ref|YP_760148.1| OmpA family membrane protein [Hyphomonas neptunium ATCC 15444]
gi|114737466|gb|ABI75591.1| membrane protein, OmpA family [Hyphomonas neptunium ATCC 15444]
Length = 544
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF-PSTVIAIQSHTDSIGT 122
++ +G I + + F + ++ + L +A L + + ++ HTDS G+
Sbjct: 415 IAAVGAEIRLSLDSALLFDVGKYEIKPEAESALAELAAQLQTYGADIRVTVEGHTDSTGS 474
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S+ RA + L + +++RG+ P+ N T+ GR N+R++I I
Sbjct: 475 AASNQTLSENRARSVWDNLSGKISPVPEDVTIRGYGASRPVADNATEEGRAENRRVDILI 534
Query: 183 FP 184
P
Sbjct: 535 LP 536
>gi|150024266|ref|YP_001295092.1| OmpA family outer membrane protein P60 [Flavobacterium
psychrophilum JIP02/86]
gi|113927364|emb|CAL07968.2| outer membrane protein A [Flavobacterium psychrophilum JIP02/86]
gi|149770807|emb|CAL42272.1| Outer membrane protein OmpA family P60 [Flavobacterium
psychrophilum JIP02/86]
Length = 465
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 78/188 (41%), Gaps = 14/188 (7%)
Query: 9 MFIMTTISGCGLASREKK--------KVFLHKSNDT----DIVNKRFGSSLDKAEDEFQM 56
+ + ++GC + KV + N D DK
Sbjct: 278 VAGLAALNGCPDTDGDGVADMKDKCPKVAGPRDNGGCPWPDTDGDSVLDKDDKCPTVKGT 337
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ VS + F + + +K+ LP+L + ILN+FP++ +I+
Sbjct: 338 VANNGCPEVSEEAIKKLNDYAKTILFDNAKFTFQKQTLPILDAMVAILNEFPTSKFSIEG 397
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+TD+ G N +S+ RA + +LI + S+ ++ G+ PI +N TK G+ N
Sbjct: 398 NTDNSGKKATNQTLSENRAKAVADFLISK-GISSDRLTSIGYGDSMPIASNKTKAGKAQN 456
Query: 176 QRIEIQIF 183
+R+E+++
Sbjct: 457 RRVEVKVV 464
>gi|326565587|gb|EGE15750.1| outer membrane protein CD [Moraxella catarrhalis 12P80B1]
Length = 449
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 4/163 (2%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
++ + + D LD + G V
Sbjct: 271 EEAPAVIEDIVVDSDGDGVPDHLDACPGTPVNTVVDPRGCPVQVNLVEELRQELRVFFDY 330
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL---KNNLLISQERADVIKSY 140
+ ++ ++ + +A + +FP+ I+ H + N +S+ RA+ +KS
Sbjct: 331 DKSIIKPQYREEVAKVAAQMREFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSM 390
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L + ++ G+ + PI N T G+ N+R+E I
Sbjct: 391 LSNEFGIAPNRLNAVGYGFDRPIAPNTTAEGKAMNRRVEAVIT 433
>gi|90407861|ref|ZP_01216037.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3]
gi|90311036|gb|EAS39145.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3]
Length = 339
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 54/131 (41%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
AE+ Q +++ V I L ++ + L + L +P
Sbjct: 198 AEEPVQEKVEAVKEKVQDKMMKIASEKVQVAFPFGSSVLSEESMQQLTPVIEHLKAYPDA 257
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ + HTD+ G + N S +RAD + +YL + ++V G PI TNDT
Sbjct: 258 KLFLVGHTDASGPAEYNQTFSVKRADALATYLSEEFSIDKSRMTVSGEGESMPIATNDTT 317
Query: 170 VGRQNNQRIEI 180
GR N+R+ +
Sbjct: 318 EGRAMNRRVSV 328
>gi|238920737|ref|YP_002934252.1| peptidoglycan-associated outer membrane lipoprotein [Edwardsiella
ictaluri 93-146]
gi|238870306|gb|ACR70017.1| peptidoglycan-associated lipoprotein, putative [Edwardsiella
ictaluri 93-146]
Length = 170
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 60/181 (33%), Gaps = 17/181 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L + IM ++ C + N S D+ +LQ
Sbjct: 6 VLKGLMLVLPIM-AVAACSSKKNTNDDQSGMGMGAKGMENSSSNLSSDEQARLQMQELQK 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + + ++ L A L PS + ++ HTD
Sbjct: 65 NNI---------------VYFGLDKYDVTPDYMQELDAHAAFLRSNPSYKVTVEGHTDER 109
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S I + + + P + N+R +
Sbjct: 110 GTPEYNIALGERRANAV-KMYLQGKGVSADQIDIVSYGKEKPAVLGHDEAAYAKNRRAVL 168
Query: 181 Q 181
Sbjct: 169 V 169
>gi|226950064|ref|YP_002805155.1| chemotaxis motB protein [Clostridium botulinum A2 str. Kyoto]
gi|226842943|gb|ACO85609.1| chemotaxis motB protein [Clostridium botulinum A2 str. Kyoto]
Length = 247
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 10/181 (5%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDM 71
SG + K + +T + + GS E + + V G
Sbjct: 63 SGDSIVDYNMKNGDIPLVGETTKLGRETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRG 122
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNN 126
I + +V F ++ + ++ I ++ P+ + I+ HTD++ +N
Sbjct: 123 IIIQLRDNVLFEIGRADIKPQSKQIMDKINDLIATLPN-EVIIEGHTDNVPIKNEVYGSN 181
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S RA + Y ++ + + G+ PI N++ R N+R+ I I +
Sbjct: 182 WELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRSKNRRVNIVIVSKE 241
Query: 187 N 187
Sbjct: 242 K 242
>gi|323703350|ref|ZP_08115000.1| OmpA/MotB domain protein [Desulfotomaculum nigrificans DSM 574]
gi|323531713|gb|EGB21602.1| OmpA/MotB domain protein [Desulfotomaculum nigrificans DSM 574]
Length = 263
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 69/195 (35%), Gaps = 15/195 (7%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSN-----DTDIVNKRFGSSLDKAEDEFQMQ 57
K ++ + T+ G + + + + +++ + + Q
Sbjct: 45 KYYAIASSLAKTMGGSQSIMDNAGAAIVPGAAREKSNEQGMPESVEQRNMESIKRQIQDY 104
Query: 58 LQDTG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ G + V+ + V F L ++ I IL++ + I
Sbjct: 105 IDKNGLSGKVTVAIEERGVVVSFQDVVLFPLGVADLNPSSTQIVDKIGAILHQTNNY-IR 163
Query: 113 IQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++ HTD++ + N +S RA + LI+ +S G+ P ND+
Sbjct: 164 VEGHTDNLPIRTSKFPSNWELSLARAASVVHRLIEYSGIPAERLSATGYGEYRPRRPNDS 223
Query: 169 KVGRQNNQRIEIQIF 183
RQ N+R++I +
Sbjct: 224 DANRQQNRRVDIVVL 238
>gi|295704127|ref|YP_003597202.1| chemotaxis protein MotB [Bacillus megaterium DSM 319]
gi|294801786|gb|ADF38852.1| chemotaxis protein MotB [Bacillus megaterium DSM 319]
Length = 277
Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 6/177 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
AS + + + + K Q + + S + + I
Sbjct: 101 SPASSQSLTSEQKEQTIREADQEELQQIQSKINAYIQKKNLTNQLQTSLTEEGLLISIRD 160
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQER 133
+V F + + + I+ +L P I I HTD++ ++N +S R
Sbjct: 161 NVLFDSGRAQVRSEDTKIANDISELLVIDPPRNIIISGHTDNVPIRNAGFESNWELSVMR 220
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A +++ S S +GF P+ +N+T G+ N+R+EI I PR IK+
Sbjct: 221 AVNFMKVILKNDKLSPSMFSAKGFGEFKPVTSNNTAEGQAKNRRVEILITPR-TIKQ 276
>gi|90414007|ref|ZP_01221991.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
3TCK]
gi|90324929|gb|EAS41450.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
3TCK]
Length = 327
Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 47/100 (47%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L ++ + LQ IA L FP T + + HTDS G N +S+ERA V+ Y
Sbjct: 218 FAFDSDTLSQQDIDQLQPIAQRLVNFPETELFVIGHTDSRGAEAYNQNLSEERAAVVAGY 277
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
L I +G P+ NDT+ GR N+R+E+
Sbjct: 278 LATHFGIEQSRIQAQGRGELEPVAANDTEDGRAQNRRVEV 317
>gi|332668211|ref|YP_004450999.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332337025|gb|AEE54126.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 317
Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + G+ I VSF + L +L + +LN P I+ HTD +G
Sbjct: 197 IQQDGEGIKIRFSEKVSFETGKSELVAAADSILAITVRMLNYNPEAKCRIEGHTDDVGNA 256
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K+NLL+SQ RA + + L RG+ ++ + V+G+ P+ +N + G+ N+R++I I
Sbjct: 257 KDNLLLSQSRAKAVATALKNRGIPTSVQLEVKGYGSTKPVASNSSAEGKSLNRRVDIVI 315
>gi|255068383|ref|ZP_05320238.1| OmpA family protein [Neisseria sicca ATCC 29256]
gi|255047376|gb|EET42840.1| OmpA family protein [Neisseria sicca ATCC 29256]
Length = 421
Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 61/158 (38%), Gaps = 6/158 (3%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKFL 93
+ ++ S + + ++ + V D T I + ++ ++
Sbjct: 238 PSVTAKQQETQSTVRLRPLLENEIARKLVSVEDFQDRSTVTILGDGLFESGSAQIQDQYY 297
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSN 149
P+L ++ L+ I + +TD+ +N +SQ RAD +K L+ +
Sbjct: 298 PVLARVSQALDSVEG-QIVVTGYTDNQPIQSLNFPSNWHLSQARADAVKEILLNYIKNGG 356
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
I G P+ NDT R N+R+EI +F G
Sbjct: 357 VRIRSEGRGSTDPVAPNDTLENRAKNRRVEITLFTTGT 394
>gi|332284746|ref|YP_004416657.1| outer membrane protein A precursor [Pusillimonas sp. T7-7]
gi|330428699|gb|AEC20033.1| outer membrane protein A precursor [Pusillimonas sp. T7-7]
Length = 192
Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + +L +A+ + + HTDSIGT + N +SQ RA+ +
Sbjct: 84 DTFFDFDKSTLKPEGRQVLDQVASQADTINLETLIATGHTDSIGTEQYNQGLSQRRANSV 143
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K YL+ +GV+++R I V G P+ +N T+ GR N+R+EI+I
Sbjct: 144 KDYLVSKGVAADR-IYVEGKGETSPVASNSTREGRAQNRRVEIEIV 188
>gi|253701635|ref|YP_003022824.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251776485|gb|ACT19066.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 432
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 54/102 (52%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ L+ ++ L+ +A LN+FP+ I+ HTD++G N+ +SQ RAD I
Sbjct: 323 NIQFDTNKADLKPQYRAELKALADFLNEFPNATGVIEGHTDNVGPKALNMKLSQLRADKI 382
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
++ LI+ + I G+ P+ +N K G+ N+RIE
Sbjct: 383 RNSLIKEFGIAPERIKAIGYGPAKPVASNKDKAGKAKNRRIE 424
>gi|292493578|ref|YP_003529017.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
gi|291582173|gb|ADE16630.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
Length = 279
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 72/177 (40%), Gaps = 7/177 (3%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
+ +++ F + + ++ Q + + + + + + +
Sbjct: 84 ALPAIPSSAQTLGISFPSAATQEHSAMTSLKAITEEVRITLQPLIDEDLVRLRQGQEWLE 143
Query: 74 CYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLL 128
I V F LE + +P+L+ +A IL +FP+ I ++ TD++ +N
Sbjct: 144 VEINDRVLFTSGSAKLEAEAVPVLKKLAKILRRFPN-PIQVEGFTDNVPISTAVFPSNWE 202
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S RA + +L R S ++ G+ P+ N T GR+ N+R+ + I R
Sbjct: 203 LSSARAASVV-HLFDRFGVSPARMAAIGYGQYRPVADNSTPEGRRRNRRVALVILGR 258
>gi|153871249|ref|ZP_02000470.1| outer membrane protein OprF [Beggiatoa sp. PS]
gi|152072284|gb|EDN69529.1| outer membrane protein OprF [Beggiatoa sp. PS]
Length = 188
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ +F P L A L + T+I I HTD+IG+ + N +SQ RA +
Sbjct: 81 VYFESDSTRIKAEFYPWLHQYAKTLQSELAETMIEIGGHTDNIGSDEYNKDLSQRRAQAV 140
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
K+ L+ + S + V+G+ P+D N+ + GR N+R+E++I P+
Sbjct: 141 KNILLSKYKISANRLIVKGYGENQPLDVNENREGRAINRRVELKIVPK 188
>gi|262404049|ref|ZP_06080604.1| outer membrane protein A precursor [Vibrio sp. RC586]
gi|262349081|gb|EEY98219.1| outer membrane protein A precursor [Vibrio sp. RC586]
Length = 335
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 49/126 (38%), Gaps = 3/126 (2%)
Query: 59 QDTGIVVSRIGDMITCYIP--VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + V + L + L IA LN P + I H
Sbjct: 204 AEELVSVELLPKTFIFSAKNMDGFFENDSSRLSHNVIEQLSNIAATLNNHPQSRAVIVGH 263
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS G+ N L+S++RA + LI+ + I RG PI N T GR N+
Sbjct: 264 TDSTGSTAYNQLLSEDRAQEAANLLIEL-GVTPTQIEWRGLGESNPIADNHTADGRAQNR 322
Query: 177 RIEIQI 182
RIEI I
Sbjct: 323 RIEITI 328
>gi|257871284|ref|ZP_05650937.1| flagellar motor protein MotB [Enterococcus gallinarum EG2]
gi|257805448|gb|EEV34270.1| flagellar motor protein MotB [Enterococcus gallinarum EG2]
Length = 254
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 63/169 (37%), Gaps = 6/169 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A + S T + N++ D+ E V D + +
Sbjct: 79 KAPTSTEAQAQEASVRTQLENQQLQKISDQLSQELASSGLKDQTEVRLESDGLHITLASS 138
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS-----IGTLKNNLLISQER 133
+ F + L L++ L K + I I HTD+ G ++N +S R
Sbjct: 139 ILFTSGSAEITATTRQSLDLLSDSLKKLKTNKIVIAGHTDNVPEKGNGRYQSNWDLSSAR 198
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A + Y I +G + +++ FA P N+T GR N+R+E+ I
Sbjct: 199 AINVMEYFISKGAVLEKNAAIQAFADTEPKADNNTPQGRSENRRVEMII 247
>gi|225025598|ref|ZP_03714790.1| hypothetical protein EIKCOROL_02500 [Eikenella corrodens ATCC
23834]
gi|224941636|gb|EEG22845.1| hypothetical protein EIKCOROL_02500 [Eikenella corrodens ATCC
23834]
Length = 183
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 14/174 (8%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ-----LQDTGIVVSRIGDMITCY 75
+ + +++ S+L + Q Q +G+ + G I
Sbjct: 4 TASDASNASAPAADEQASAVASASSALSAQGNSLSAQGSNLSSQGSGLSATETGFNIEIN 63
Query: 76 IPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ V F + L+ + LQ A I+ + VI I HTDS G+ N +S RA
Sbjct: 64 LSSDVLFDFDKAELKPEADADLQKAADIIRQKGQGVILITGHTDSKGSDAYNQRLSLARA 123
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQI 182
+K++ +G+ N + G PI N D GR N+R+EI +
Sbjct: 124 QAVKNWFEAKGLQQNYQL--EGLGATRPIAPNTHPDGSDNPEGRAQNRRVEIIV 175
>gi|254302656|ref|ZP_04970014.1| hypothetical protein FNP_0283 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322848|gb|EDK88098.1| hypothetical protein FNP_0283 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 157
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ +L+ I + + + I I HTDSIG+ N +S+
Sbjct: 29 IVLDERALNFDFDKSNVKPEYYDLLKNIKEFVEQN-NYEITIVGHTDSIGSNAYNFKLSR 87
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA+ +K+ L++ G++ +R + + + PI TN+TK GR N+R+E ++ R ++
Sbjct: 88 RRAESVKAKLLEFGLTEDRIVGIEAMGEEQPIATNETKEGRAQNRRVEFKLVQRETVQ 145
>gi|262195035|ref|YP_003266244.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262078382|gb|ACY14351.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 195
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 69/184 (37%), Gaps = 16/184 (8%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+S ++ +++ CG + + ++ + V + +++ + +L+D
Sbjct: 8 LMSTALVLSLAACGSKPKAEATEPTSENME---VPETDDEPMEERTEAATGELRD----- 59
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + + L + L A L P + + H D GT +
Sbjct: 60 ------VLIILERVHFPLDSTDLPEDAREALAEAAPKLANNPDVHLYVDGHADQRGTEEY 113
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N+ + + RA + + R S + + F P+ T V N+R++ ++ R
Sbjct: 114 NVALGERRARAVSD-YLTRMGVSADNLHLVSFGESRPVSEQGTNVAMAKNRRVDFRLM-R 171
Query: 186 GNIK 189
G+++
Sbjct: 172 GDVR 175
>gi|83950613|ref|ZP_00959346.1| OmpA domain protein [Roseovarius nubinhibens ISM]
gi|83838512|gb|EAP77808.1| OmpA domain protein [Roseovarius nubinhibens ISM]
Length = 641
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 62/170 (36%), Gaps = 2/170 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHV 80
+ K + + +R +D E + + +
Sbjct: 442 TGNKDASAQISGFLAETLGERGQFEIDVTYQEVLDPIAALPTPEECVSKIQLIVAERKIN 501
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L+ +L IA IL K + I +TDS G N +S+ RA +
Sbjct: 502 FEPGSDKLDSNGAAILDDIAEILKKCGEIKLEIAGYTDSQGRESMNQQLSENRARAVLDG 561
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L R V ++ + +V G+ PI ND+ GR+ N+RIE + +K+
Sbjct: 562 LRMRRVITSTYEAV-GYGENDPIADNDSDEGREANRRIEFHLIKPEPVKE 610
>gi|325473749|gb|EGC76938.1| OmpA family protein [Treponema denticola F0402]
Length = 440
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 1/158 (0%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+ + S + +K+ S + E + V++ + +
Sbjct: 283 QGGLVQSSPSQEAASKKTPSQEIPLQKEKTEIKPNKDFEVAKTKRGTMLRLKNLQFEPDK 342
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L K L IA IL K S ++ HT +G + ++SQERA + L++RG
Sbjct: 343 AVLLKGEEAKLDEIAKILKKSESEFFFVEGHTADVGKPEEEKILSQERAKTVIEKLVKRG 402
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + +FI +G PI N T+ GR N+R+EI I
Sbjct: 403 IPAEKFIY-QGAGGTKPIAPNGTEEGRAQNRRVEITII 439
>gi|308376544|ref|ZP_07439229.2| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu008]
gi|308350673|gb|EFP39524.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu008]
Length = 320
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L +L +A L P + I +TD+ G+ N+ +S +RA ++ Y
Sbjct: 219 FGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADY 278
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ R + I+ G PI +N T GR N+R+EI +
Sbjct: 279 LVAR-GVAGDHIATVGLGSVNPIASNATPEGRAKNRRVEIVV 319
>gi|254508437|ref|ZP_05120557.1| outer membrane protein OmpA [Vibrio parahaemolyticus 16]
gi|219548647|gb|EED25652.1| outer membrane protein OmpA [Vibrio parahaemolyticus 16]
Length = 323
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ L+ + L + +N++P + + + +TDS G N +S++RA + +
Sbjct: 215 FELNSSKLKPESTQKLNELVAFMNQYPQSTVEVVGYTDSTGAAAYNQKLSEKRAQAVANE 274
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L +G+ ++R I+V G P+ +N+TK GR N+R+E+ +
Sbjct: 275 LEAQGIDASR-ITVSGQGENNPVASNETKEGRMMNRRVEMTV 315
>gi|153877559|ref|ZP_02004282.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
gi|152065977|gb|EDN65718.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
Length = 188
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 64/186 (34%), Gaps = 7/186 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS------SLDKAEDEFQ 55
I+ + + + ++GC ++ K ++ I G + D +
Sbjct: 3 IRHYLVLVLTIFVMAGCATKAKPKAELNPTARTPPPIFGDATGRGGIGDLPIGATVDATK 62
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + S + ++ +L+ A L + P + ++
Sbjct: 63 FPMTGSSSQNSTADLSGVPSERIIYFGYDMSNIKSNARTILEQHAAYLTQNPEIYVRLEG 122
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
H D G+ + NL + + RA+ K+ LI ++ + + P + Q N
Sbjct: 123 HADERGSREYNLALGERRAETAKNTLIML-GVFETQVTTLSYGEERPQTFEHNEQSWQQN 181
Query: 176 QRIEIQ 181
+R+E+
Sbjct: 182 RRVELV 187
>gi|222053743|ref|YP_002536105.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221563032|gb|ACM19004.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 258
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 6/165 (3%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV- 83
+K + K F + E + V + + F
Sbjct: 87 PQKAVKSGKTKSHAEEKDFKAVKAAIEAYLLKTGAQDKVSVEINRRGLVVSLKEAGFFDS 146
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKS 139
+++ +L +A L + + + ++ HTD++ N +S RA +
Sbjct: 147 GSAIVQQSAYSLLAHVAESLVNYTN-PVRVEGHTDNVPINSRTFPSNWELSTARATNLVQ 205
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
YLI+ IS GF P+ N T GR N+R++I +
Sbjct: 206 YLIKYYEFEPEKISATGFGEYRPVADNTTVDGRSKNRRVDIVLLS 250
>gi|332701239|ref|ZP_08421327.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332551388|gb|EGJ48432.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 282
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++ + ++ IA ++ + I ++ HTD+ G ++N +S+ RA +
Sbjct: 181 FDTGKSTIKPESRTIVDEIAKMMQENAGLKIKVEGHTDNQGGAESNQKLSEARAKAVVEA 240
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ +G+S++R + G PI N + GR N+R+E+
Sbjct: 241 ILAKGISASR-LKPAGHGQTKPIADNKNEEGRAKNRRVELV 280
>gi|226310457|ref|YP_002770351.1| chemotaxis MotB protein [Brevibacillus brevis NBRC 100599]
gi|226093405|dbj|BAH41847.1| chemotaxis MotB protein [Brevibacillus brevis NBRC 100599]
Length = 269
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 64/171 (37%), Gaps = 10/171 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD----TGIVVSRIGDMITCYI- 76
++E +K + + ++ L K + + +Q + + + I
Sbjct: 87 AQEAEKQKTEEEKRLEEAVRKETEDLKKLQTKLDGYIQQNKLQDKLQTKLTDEGLLITIL 146
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQE 132
+ + L+ + + +A +L P + + HTD++ + +N +S +
Sbjct: 147 DNALFDSGKADLKPEARKLASEMAGMLVPHPK-KVTVTGHTDNVPIRRAEFPSNWDLSAK 205
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R+ L++ S G +P+ N T GR N+R+E+ I
Sbjct: 206 RSVNFLKVLLENKNLDPTKFSATGLGEYHPVAPNTTDEGRAKNRRVEVAIL 256
>gi|86160165|ref|YP_466950.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85776676|gb|ABC83513.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 542
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 5/166 (3%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C K +D D V DK + I
Sbjct: 376 CPSVPGATDNQGCPKDSDKDGVPDDKDRCPDKPGIPENQGCPPERAEIKAGKIDIK---E 432
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ + +L +A ++ P V+ I+ HTDS G+ N +SQ+RA+
Sbjct: 433 KVYFDTGKATIKAQSNALLDDVAKLVAANPQVGVVTIEGHTDSTGSAATNRALSQKRAES 492
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+K YL+ +GV ++R + +GF P+++N T GR+ N+R+E I
Sbjct: 493 VKDYLVSKGVDASR-LEAKGFGPDRPVESNKTAKGREANRRVEFTI 537
>gi|256003832|ref|ZP_05428819.1| OmpA/MotB domain protein [Clostridium thermocellum DSM 2360]
gi|255992170|gb|EEU02265.1| OmpA/MotB domain protein [Clostridium thermocellum DSM 2360]
gi|316939122|gb|ADU73156.1| OmpA/MotB domain protein [Clostridium thermocellum DSM 1313]
Length = 266
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 68/167 (40%), Gaps = 9/167 (5%)
Query: 24 EKKKVFLHKS---NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ K + + D ++ +++ ++ + D + V +T + +
Sbjct: 98 NEGKSAEIGAFTGGNADKEAQKIEDFINEVQNIVEEMDLDEYVKVIEDDKSLTVRMNSVI 157
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERAD 135
F + +++ L+ I T++ + + IQ HTD++ N +S +RA
Sbjct: 158 LFDLGKADIKEPGKETLRKIGTLIKQLNKNAV-IQGHTDNLPINTMLFPTNWELSTKRAT 216
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +L+ ++ G PI NDT+ RQ N+RI+I I
Sbjct: 217 NVVLFLVDECGVDPVKLTATGNGEFRPIAPNDTEENRQKNRRIDIVI 263
>gi|116619472|ref|YP_821628.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222634|gb|ABJ81343.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 267
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 71/171 (41%), Gaps = 6/171 (3%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ E++ + SLD + +L++ + + + +
Sbjct: 84 TTEERENPTAPPPRPAETHPPDLAKSLDTLQKGLDSELKNGKLQLRLDPRGLIISMREAT 143
Query: 81 SF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERAD 135
F + + LP+L IA ++ P+ + ++ HTDS ++N +S R+
Sbjct: 144 FFASGDDAVAPGSLPILTKIAAVVQSLPN-PVRLEGHTDSRPIHTSRFRSNWELSAARSI 202
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ L R ++V G+A P DTN+T+ GR +N+R+++ + G
Sbjct: 203 AMLELLRDRFQIPASRMAVAGYAENAPADTNETEEGRAHNRRVDLVLLSAG 253
>gi|15608039|ref|NP_215414.1| outer membrane protein A OMPA [Mycobacterium tuberculosis H37Rv]
gi|15840318|ref|NP_335355.1| OmpA family protein [Mycobacterium tuberculosis CDC1551]
gi|31792087|ref|NP_854580.1| outer membrane protein A OMPA [Mycobacterium bovis AF2122/97]
gi|121636822|ref|YP_977045.1| putative outer membrane protein A ompA [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|148660677|ref|YP_001282200.1| outer membrane protein A [Mycobacterium tuberculosis H37Ra]
gi|148822109|ref|YP_001286863.1| outer membrane protein A ompA [Mycobacterium tuberculosis F11]
gi|167967701|ref|ZP_02549978.1| outer membrane protein A ompA [Mycobacterium tuberculosis H37Ra]
gi|215402698|ref|ZP_03414879.1| outer membrane protein A ompA [Mycobacterium tuberculosis 02_1987]
gi|215426166|ref|ZP_03424085.1| outer membrane protein A ompA [Mycobacterium tuberculosis T92]
gi|215429757|ref|ZP_03427676.1| outer membrane protein A ompA [Mycobacterium tuberculosis EAS054]
gi|215445042|ref|ZP_03431794.1| outer membrane protein A ompA [Mycobacterium tuberculosis T85]
gi|219556764|ref|ZP_03535840.1| outer membrane protein A ompA [Mycobacterium tuberculosis T17]
gi|224989293|ref|YP_002643980.1| putative outer membrane protein A [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253800076|ref|YP_003033077.1| hypothetical protein TBMG_03089 [Mycobacterium tuberculosis KZN
1435]
gi|254231205|ref|ZP_04924532.1| outer membrane protein A ompA [Mycobacterium tuberculosis C]
gi|254363830|ref|ZP_04979876.1| outer membrane protein A ompA [Mycobacterium tuberculosis str.
Haarlem]
gi|254549877|ref|ZP_05140324.1| hypothetical protein Mtube_05346 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260185796|ref|ZP_05763270.1| hypothetical protein MtubCP_07170 [Mycobacterium tuberculosis
CPHL_A]
gi|260199919|ref|ZP_05767410.1| hypothetical protein MtubT4_07255 [Mycobacterium tuberculosis T46]
gi|260204103|ref|ZP_05771594.1| hypothetical protein MtubK8_07315 [Mycobacterium tuberculosis K85]
gi|289442311|ref|ZP_06432055.1| outer membrane protein A ompA [Mycobacterium tuberculosis T46]
gi|289446466|ref|ZP_06436210.1| outer membrane protein A ompA [Mycobacterium tuberculosis CPHL_A]
gi|289555318|ref|ZP_06444528.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 605]
gi|289568867|ref|ZP_06449094.1| outer membrane protein A ompA [Mycobacterium tuberculosis T17]
gi|289573527|ref|ZP_06453754.1| outer membrane protein A ompA [Mycobacterium tuberculosis K85]
gi|289744630|ref|ZP_06504008.1| outer membrane protein A ompA [Mycobacterium tuberculosis 02_1987]
gi|289749421|ref|ZP_06508799.1| outer membrane protein A ompA [Mycobacterium tuberculosis T92]
gi|289752954|ref|ZP_06512332.1| outer membrane protein A ompA [Mycobacterium tuberculosis EAS054]
gi|289756985|ref|ZP_06516363.1| outer membrane protein A ompA [Mycobacterium tuberculosis T85]
gi|294996380|ref|ZP_06802071.1| hypothetical protein Mtub2_18234 [Mycobacterium tuberculosis 210]
gi|297633418|ref|ZP_06951198.1| hypothetical protein MtubK4_04816 [Mycobacterium tuberculosis KZN
4207]
gi|297730403|ref|ZP_06959521.1| hypothetical protein MtubKR_04896 [Mycobacterium tuberculosis KZN
R506]
gi|306775025|ref|ZP_07413362.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu001]
gi|306782060|ref|ZP_07420397.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu002]
gi|306783573|ref|ZP_07421895.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu003]
gi|306787937|ref|ZP_07426259.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu004]
gi|306792274|ref|ZP_07430576.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu005]
gi|306796673|ref|ZP_07434975.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu006]
gi|306806741|ref|ZP_07443409.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu007]
gi|306966938|ref|ZP_07479599.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu009]
gi|306971133|ref|ZP_07483794.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu010]
gi|307078861|ref|ZP_07488031.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu011]
gi|307083420|ref|ZP_07492533.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu012]
gi|313657730|ref|ZP_07814610.1| hypothetical protein MtubKV_04886 [Mycobacterium tuberculosis KZN
V2475]
gi|54040011|sp|P65594|Y923_MYCBO RecName: Full=Uncharacterized protein Mb0923
gi|54042590|sp|P65593|Y899_MYCTU RecName: Full=Uncharacterized protein Rv0899/MT0922
gi|1314039|emb|CAA97374.1| OUTER MEMBRANE PROTEIN A OMPA [Mycobacterium tuberculosis H37Rv]
gi|13880481|gb|AAK45169.1| OmpA family protein [Mycobacterium tuberculosis CDC1551]
gi|31617675|emb|CAD93784.1| PROBABLE OUTER MEMBRANE PROTEIN A OMPA [Mycobacterium bovis
AF2122/97]
gi|114199356|gb|ABI54278.1| outer membrane protein A [Mycobacterium bovis]
gi|121492469|emb|CAL70937.1| probable outer membrane protein A ompA [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124600264|gb|EAY59274.1| outer membrane protein A ompA [Mycobacterium tuberculosis C]
gi|134149344|gb|EBA41389.1| outer membrane protein A ompA [Mycobacterium tuberculosis str.
Haarlem]
gi|148504829|gb|ABQ72638.1| outer membrane protein A [Mycobacterium tuberculosis H37Ra]
gi|148720636|gb|ABR05261.1| outer membrane protein A ompA [Mycobacterium tuberculosis F11]
gi|224772406|dbj|BAH25212.1| putative outer membrane protein A [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253321579|gb|ACT26182.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 1435]
gi|289415230|gb|EFD12470.1| outer membrane protein A ompA [Mycobacterium tuberculosis T46]
gi|289419424|gb|EFD16625.1| outer membrane protein A ompA [Mycobacterium tuberculosis CPHL_A]
gi|289439950|gb|EFD22443.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 605]
gi|289537958|gb|EFD42536.1| outer membrane protein A ompA [Mycobacterium tuberculosis K85]
gi|289542621|gb|EFD46269.1| outer membrane protein A ompA [Mycobacterium tuberculosis T17]
gi|289685158|gb|EFD52646.1| outer membrane protein A ompA [Mycobacterium tuberculosis 02_1987]
gi|289690008|gb|EFD57437.1| outer membrane protein A ompA [Mycobacterium tuberculosis T92]
gi|289693541|gb|EFD60970.1| outer membrane protein A ompA [Mycobacterium tuberculosis EAS054]
gi|289712549|gb|EFD76561.1| outer membrane protein A ompA [Mycobacterium tuberculosis T85]
gi|308216378|gb|EFO75777.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu001]
gi|308325291|gb|EFP14142.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu002]
gi|308331576|gb|EFP20427.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu003]
gi|308335389|gb|EFP24240.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu004]
gi|308339194|gb|EFP28045.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu005]
gi|308342931|gb|EFP31782.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu006]
gi|308346757|gb|EFP35608.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu007]
gi|308355333|gb|EFP44184.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu009]
gi|308359272|gb|EFP48123.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu010]
gi|308363182|gb|EFP52033.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu011]
gi|308366838|gb|EFP55689.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu012]
gi|326904881|gb|EGE51814.1| outer membrane protein A ompA [Mycobacterium tuberculosis W-148]
gi|328459815|gb|AEB05238.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 4207]
Length = 326
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L +L +A L P + I +TD+ G+ N+ +S +RA ++ Y
Sbjct: 225 FGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADY 284
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ R + I+ G PI +N T GR N+R+EI +
Sbjct: 285 LVAR-GVAGDHIATVGLGSVNPIASNATPEGRAKNRRVEIVV 325
>gi|332307428|ref|YP_004435279.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332174757|gb|AEE24011.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 305
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 7/174 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ S T + + K + + ++ D I + +G + I + S
Sbjct: 126 GAAQQTASEQSSAKTTASQEEVAKQMKKVAQQLEKEILDGAIEMESLGQQLIIRIRENGS 185
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQERADV 136
F FL+ +F P+L+ I T+L P I I H+DS ++N +S +RA
Sbjct: 186 FSAGSAFLQPQFKPILRKIGTLLADMPG-DIEISGHSDSLVISNELYRSNWDLSAQRAVA 244
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ L + ++V G A P+ D R N+R+EI + +G K+
Sbjct: 245 VAEELRKAPGFDEGRMAVIGKADTAPLLGEDDAQARSRNRRVEIAV-KQGKAKE 297
>gi|156973571|ref|YP_001444478.1| hypothetical protein VIBHAR_01273 [Vibrio harveyi ATCC BAA-1116]
gi|156525165|gb|ABU70251.1| hypothetical protein VIBHAR_01273 [Vibrio harveyi ATCC BAA-1116]
Length = 318
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I ++ L+ + L + LN++P + + +TD+ G N +S++RA
Sbjct: 203 TIGTGSFALNSTTLKPESAAKLDDLVAFLNEYPQANVDVIGYTDTSGPAAYNQKVSEKRA 262
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + LI++G+ ++R I RG PI +N+T+ GR+ N+R+E+ +
Sbjct: 263 ESVAHALIEKGIDADR-IHARGEGENNPIASNETREGREQNRRVEVVV 309
>gi|125974911|ref|YP_001038821.1| OmpA/MotB [Clostridium thermocellum ATCC 27405]
gi|281418623|ref|ZP_06249642.1| OmpA/MotB domain protein [Clostridium thermocellum JW20]
gi|125715136|gb|ABN53628.1| OmpA/MotB [Clostridium thermocellum ATCC 27405]
gi|281407707|gb|EFB37966.1| OmpA/MotB domain protein [Clostridium thermocellum JW20]
Length = 266
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 68/167 (40%), Gaps = 9/167 (5%)
Query: 24 EKKKVFLHKS---NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ K + + D ++ +++ ++ + D + V +T + +
Sbjct: 98 NEGKSAEIGAFTGGNADKEAQKIEDFINEVQNIVEEMDLDEYVKVIEDDKSLTVRMNSVI 157
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERAD 135
F + +++ L+ I T++ + + IQ HTD++ N +S +RA
Sbjct: 158 LFDLGKADIKEPGKETLRKIGTLIKQLNKNAV-IQGHTDNLPINTMLFPTNWELSTKRAT 216
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +L+ ++ G PI NDT+ RQ N+RI+I I
Sbjct: 217 NVVLFLVDECGVDPVKLTATGNGEFRPIAPNDTEENRQKNRRIDIVI 263
>gi|330807745|ref|YP_004352207.1| outer membrane protein OmpA [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375853|gb|AEA67203.1| putative lipoprotein; putative outer membrane protein, OmpA
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 263
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 60/151 (39%), Gaps = 2/151 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ +L A + QLQD+ + + + ++ L
Sbjct: 99 AEAELKNAGDERARALLDARNAQIKQLQDS-LNAKQTERGTLVTFGDVLFATNKSDLRAS 157
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ + +A L + P + I+ +TDS G+ N +S+ RA + + +
Sbjct: 158 GMTNVSKLAQFLQENPDRKVIIEGYTDSTGSDSYNQSLSERRASSV-QLALVKMGVDPAR 216
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I +G+ ++P+ N + GR N+R+E+ I
Sbjct: 217 IVTQGYGKEFPVADNTSVSGRAMNRRVEVTI 247
>gi|213028311|ref|ZP_03342758.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 111
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
S L+ L +A +L ++P T + + +TDS G+ N+ +SQ+RAD +
Sbjct: 4 NVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGSHDLNMRLSQQRADSV 63
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S LI +GV ++R I G PI +N T G+ N+R+EI + P
Sbjct: 64 ASSLITQGVDASR-IRTSGMGPANPIASNSTAEGKAQNRRVEITLSP 109
>gi|71901734|ref|ZP_00683806.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|182681496|ref|YP_001829656.1| peptidoglycan-associated lipoprotein [Xylella fastidiosa M23]
gi|71728506|gb|EAO30665.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|182631606|gb|ACB92382.1| peptidoglycan-associated lipoprotein [Xylella fastidiosa M23]
Length = 179
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 67/181 (37%), Gaps = 9/181 (4%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L +S+ + + C +E+ V + S
Sbjct: 8 LLISLLSTSALVACSKKVKEQPHVPVK--------PMAPTVSTPTPPTATAPTDSSGLYT 59
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + V + ++K+F +L A L PS I +Q +TD G+ +
Sbjct: 60 AADLDTDACLRQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDERGSRE 119
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ + + R + + Y +Q +S+ ++V + + P+ T T+ N+R+EI
Sbjct: 120 YNIALGERRGNSVL-YSLQANGASSGQLNVVSYGEERPVCTESTESCWSRNRRVEIVYTA 178
Query: 185 R 185
+
Sbjct: 179 K 179
>gi|254490409|ref|ZP_05103596.1| Thrombospondin type 3 repeat family [Methylophaga thiooxidans
DMS010]
gi|224464375|gb|EEF80637.1| Thrombospondin type 3 repeat family [Methylophaga thiooxydans
DMS010]
Length = 200
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 14/179 (7%)
Query: 17 GCG-LASREKKKVFLH--KSNDTDIVNKRFGSSLDKAEDEFQMQLQ-----DTGIVVSRI 68
GC + + ++ + R G LD D L G++V +
Sbjct: 21 GCAYDTDGDGVYDGIDLCRNTPEGVTVDRVGCPLDSDNDAVADYLDLCPGTPEGVIVDQD 80
Query: 69 GDMI----TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTL 123
G + + + L ++ +L+ T+L + V + ++ HTDSIGT
Sbjct: 81 GCPLAGENLLSLTGVNFAFDKAVLTEEAKTILEEAVTLLKETDGIVEVRVEGHTDSIGTE 140
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL RG+ N + V G P+ +ND+K GR N+R++ +
Sbjct: 141 AYNQDLSQRRAQSVVDYLTSRGIDGNNLVPV-GLGESSPVASNDSKAGRAANRRVDFVV 198
>gi|150016469|ref|YP_001308723.1| OmpA/MotB domain-containing protein [Clostridium beijerinckii NCIMB
8052]
gi|149902934|gb|ABR33767.1| OmpA/MotB domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 251
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 10/179 (5%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD----TGIVVSRIGD 70
+ +S V ++ + + L + + + D + S
Sbjct: 63 VIAVSDSSNSPPTVIDQQNTQNNSDSIAEEEKLSDVKKKVDDLVNDSELKGSVTTSIQER 122
Query: 71 MITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKN 125
+ V F + ++ + L I+ ILN + I ++ HTD+ +
Sbjct: 123 GLIISFNDSVFFNSGQSTIKPDWQGKLISISKILNDIDNY-IHVEGHTDNVAINNDYFHS 181
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +S RA + +LI +G +S G+ P+ N+T+ GR N+R++I I
Sbjct: 182 NWQLSAVRAANVVEFLISKGNVKPERLSSVGYGEYRPVKDNNTEDGRAANRRVDIVILN 240
>gi|302536573|ref|ZP_07288915.1| type VI secretion system OmpA/MotB [Streptomyces sp. C]
gi|302445468|gb|EFL17284.1| type VI secretion system OmpA/MotB [Streptomyces sp. C]
Length = 212
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 73/196 (37%), Gaps = 16/196 (8%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE-------------- 51
GL + + + + K + + S+ +
Sbjct: 15 GLVIAGTHLLGATSAHADDPKPSVPPGTEPSAAAPVPIDSNAPGLKIPQGGTLAPIKVLD 74
Query: 52 -DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E L +++ + + + +Q IA +N +T
Sbjct: 75 IAEVVEDLGGEQRRQETNQNVMMALQSEVLFPENSAVFNAQAASRIQAIAQEINTQKATR 134
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I + TD G+ ++ +S++RAD +++ L + + VRG++ YPI N T+
Sbjct: 135 IRVFGFTDDQGSYEHGKELSKQRADAVQAELAKTVTNPAVTYDVRGYSEDYPIADNSTEE 194
Query: 171 GRQNNQRIEIQIFPRG 186
GR+ N+R+EI FPRG
Sbjct: 195 GRKKNRRVEIT-FPRG 209
>gi|212712403|ref|ZP_03320531.1| hypothetical protein PROVALCAL_03491 [Providencia alcalifaciens DSM
30120]
gi|212685149|gb|EEB44677.1| hypothetical protein PROVALCAL_03491 [Providencia alcalifaciens DSM
30120]
Length = 582
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 53/109 (48%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L+ +L + P +I + +TD+ G + N +S +RA+ ++
Sbjct: 450 SLFDVGQYTLKTGATKVLVDALLNIKAKPGWLIMVSGYTDNTGNPELNQTLSLKRAESVR 509
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++IQ S +V+G+ P+ N T GR N+R+EI++ P+
Sbjct: 510 DWMIQTSDISPICFAVQGYGQNNPVADNRTADGRTRNRRVEIRLIPQAE 558
>gi|158422035|ref|YP_001523327.1| outer membrane protein [Azorhizobium caulinodans ORS 571]
gi|158328924|dbj|BAF86409.1| outer membrane protein [Azorhizobium caulinodans ORS 571]
Length = 381
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 58/116 (50%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
IG + + + + ++ + L IA++L K P + + HTD++G + +
Sbjct: 264 DSIGKTGSVALYGILFDFNSAVIKPESKATLDEIASLLRKAPDLKLVVVGHTDNVGGMDS 323
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N+ +SQ RA+ ++ L+++ + + G + P+ +N T GR N+R+E+
Sbjct: 324 NMKLSQARAEAVRRALVEQYAIAAARLQAWGAGFMAPVASNRTDEGRAKNRRVELV 379
>gi|153950607|ref|YP_001399766.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP
31758]
gi|152962102|gb|ABS49563.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
Length = 573
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 55/109 (50%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L+ + ML + P +I + HTD G + N ++S +RA+ ++
Sbjct: 445 SLFDVGKFQLKPGSIKMLVDALMNIRAKPGWLIVVAGHTDITGDAQANQILSLKRAEALR 504
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ S +V+G+ P+ TN++ GR N+R+EI + P+ +
Sbjct: 505 DWMLSTSDVSPTCFAVQGYGATRPVATNESAEGRAANRRVEISLVPQAD 553
>gi|168182734|ref|ZP_02617398.1| chemotaxis motB protein [Clostridium botulinum Bf]
gi|182674075|gb|EDT86036.1| chemotaxis motB protein [Clostridium botulinum Bf]
Length = 247
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 10/181 (5%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDM 71
SG + K + +T + + GS E + + V G
Sbjct: 63 SGDSIVDYNMKNGDIPLVGETTKLGRETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRG 122
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNN 126
I + +V F ++ + ++ I ++ P+ + I+ HTD++ +N
Sbjct: 123 IIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPN-EVIIEGHTDNVPIKNEVYGSN 181
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S RA + Y ++ + + G+ PI N++ R N+R+ I I +
Sbjct: 182 WELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRSKNRRVNIVIVSKE 241
Query: 187 N 187
Sbjct: 242 K 242
>gi|4580969|gb|AAD24556.1|AF117964_1 OprF [Pseudomonas fuscovaginae]
Length = 326
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ ++ ++ +A + ++P T + HTDS+GT N +SQ RAD +
Sbjct: 218 DVKFDFNKAVVKPNSYGDVKNLADFMKQYPQTTTVVSGHTDSVGTDAYNQKLSQRRADAV 277
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
K L++ G++ NR SV + P+ N T+ GR N+R+E
Sbjct: 278 KQVLVKDGIAPNRIQSVV-YGKTRPVADNATEAGRAINRRVE 318
>gi|149183513|ref|ZP_01861940.1| flagellar motor protein MotB [Bacillus sp. SG-1]
gi|148848785|gb|EDL63008.1| flagellar motor protein MotB [Bacillus sp. SG-1]
Length = 253
Score = 93.9 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 37/226 (16%), Positives = 74/226 (32%), Gaps = 45/226 (19%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS------------------ 46
L L + + + +K + N+ +
Sbjct: 26 LTLLLALFIVLFASSSVDAQKFQAMSKAFNEIFVGGTGVMEYPTPVPETDAGDRNKNEEQ 85
Query: 47 ----LDKAEDEFQMQLQ------------------DTGIVVSRIGDMITCYIPVHVSFV- 83
+D+ E + ++Q T + + I +V F
Sbjct: 86 NSLTVDELEAAKKREMQELKKLQDRVNGYIAANELQTQFATELTSEGLLLTIRDNVLFQS 145
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKS 139
+ K + + ++ +L + I HTD++ ++N +S RA
Sbjct: 146 GSAVVGAKDEGIAKELSGLLEMDTPRSVIISGHTDNVPISTANYESNWELSVMRAVNFMK 205
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+++ R+ S +GF P+ +NDT GR N+R+E+ I PR
Sbjct: 206 IILKNQNLDPRWFSAKGFGEFKPMASNDTSEGRAKNRRVEVLILPR 251
>gi|19705338|ref|NP_602833.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19705349|ref|NP_602844.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19713317|gb|AAL94132.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19713330|gb|AAL94143.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 151
Score = 93.9 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ +L I + + + I I HTDSIG+ N +S+
Sbjct: 29 IVLDERSLNFDFDKSNVKPQYYDLLNNIKEFVEQN-NYEITIVGHTDSIGSNAYNFKLSR 87
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
RA+ +K+ L++ G+S +R + + + PI TN TK GR N+R+E ++ R I
Sbjct: 88 RRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRETI 144
>gi|310639572|ref|YP_003944330.1| ompa/motb domain-containing protein [Paenibacillus polymyxa SC2]
gi|309244522|gb|ADO54089.1| OmpA/MotB domain-containing protein [Paenibacillus polymyxa SC2]
Length = 275
Score = 93.9 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 9/166 (5%)
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV----SRIGDMITCYIPVHVSFV- 83
S+ + +R L K + + +Q+ G+ + I + F
Sbjct: 93 ATSTSDLQKQLAQREEEDLKKLKKQMDQYIQNNGLSTLLNTKLNQSQLMITISDNALFSS 152
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKS 139
+ ++ + + + I+++L +FP + + HTD++ +N +S +R+
Sbjct: 153 GQAEVKPEARKLAKSISSMLQQFPGYDVIVSGHTDNVPISNSQFPSNFDLSAKRSLNFLR 212
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L+ G+ P+ N T GR N+R+EI + +
Sbjct: 213 ILLLNPQLDPTKFVSIGYGEYRPLAGNQTGAGRAKNRRVEISVLRK 258
>gi|295699895|ref|YP_003607788.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295439108|gb|ADG18277.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 410
Score = 93.9 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 49/106 (46%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L+ + ++ P I + HTD++G ++NL +S RA ++
Sbjct: 299 SLFDSGRAQLKPGSTRAMVDALEMIKAHPDKRILVAGHTDNVGNPQSNLKLSTARAQAVR 358
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+LI + +++G+ PI +N + GR N+R+EI + P
Sbjct: 359 DWLIDVSGIAETQFAIQGYGDTRPIASNASDDGRARNRRVEITLVP 404
>gi|308271290|emb|CBX27898.1| hypothetical protein N47_G32220 [uncultured Desulfobacterium sp.]
Length = 310
Score = 93.9 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 3/164 (1%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ K ++ +IV + + D + V + +
Sbjct: 146 KEVKDKSDAEFRNQQAEIVEQGKQNLFDSEMRTAAAQAELAKLAAVKEEERGLVVTLSGG 205
Query: 80 VSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
V F S + L L +A L P+ + ++ HTDSIG+ N +SQ RAD ++
Sbjct: 206 VLFQSAKSTLLPSAQVKLDQVAKALLSIPARNLIVEGHTDSIGSESYNQGLSQRRADAVR 265
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YL+Q+G ++R I RG PI N + GR NN+R+EI I
Sbjct: 266 DYLVQKGYPADR-IQARGKGEGSPIADNTSPEGRANNRRVEIVI 308
>gi|292490342|ref|YP_003525781.1| peptidoglycan-associated lipoprotein [Nitrosococcus halophilus Nc4]
gi|291578937|gb|ADE13394.1| peptidoglycan-associated lipoprotein [Nitrosococcus halophilus Nc4]
Length = 191
Score = 93.9 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 65/187 (34%), Gaps = 10/187 (5%)
Query: 4 ELGLSMFIMTT----ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
L + F + ++GC + + + +A +
Sbjct: 2 RLVIPFFFLLASVYGLAGCAGGPATQGEPTGVVVEERGTGVGETAYPEGEALEGEGATAW 61
Query: 60 DTGIVVSRIGDMIT-----CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
G + GD + V +++ P+++ L K P + ++
Sbjct: 62 GIGEGAAYQGDPLADPASPLANRVIYFEFDSSEIQEDDRPIVEAHGDYLAKHPDVSLTLE 121
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD G+ + NL + + RA+ ++ L+ +S + V + + P + Q
Sbjct: 122 GHTDERGSREYNLALGERRANAVRR-LVLLMGASEDQVQVVSYGEERPAVDGHDEGAWQL 180
Query: 175 NQRIEIQ 181
N+R+EI
Sbjct: 181 NRRVEIL 187
>gi|109897648|ref|YP_660903.1| flagellar motor protein MotB [Pseudoalteromonas atlantica T6c]
gi|109699929|gb|ABG39849.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
Length = 305
Score = 93.9 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 7/174 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ S T + + K + + ++ D I + +G + I + S
Sbjct: 126 GAAQQTASEQSSAKTTASQEEANKQMKKVAQQLEKEILDGAIEMESLGQQLIIRIRENGS 185
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQERADV 136
F FL+ +F P+L+ I T+L P I I H+DS ++N +S +RA
Sbjct: 186 FSAGSAFLQPQFKPILRKIGTLLADMPG-DIEISGHSDSLVISNELYRSNWDLSAQRAVA 244
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ L + ++V G A P+ D R N+R+EI I +G K+
Sbjct: 245 VAEELRKAPGFDEGRMAVIGKADTAPLLGEDDAQARSRNRRVEIAI-KQGKAKE 297
>gi|254469405|ref|ZP_05082810.1| OmpA family protein [Pseudovibrio sp. JE062]
gi|211961240|gb|EEA96435.1| OmpA family protein [Pseudovibrio sp. JE062]
Length = 473
Score = 93.9 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 65/174 (37%), Gaps = 8/174 (4%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+ +++ S + V + + + ++Q +VV +
Sbjct: 295 AALPNLPQQQATPGTPGSPSSPQVVRSSTAY-QQISAFLATEIQQGLVVVMNANGNVVIR 353
Query: 76 IPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI----S 130
+ F + L +F+P++ +A LN P I + ++D+I S
Sbjct: 354 LTGSGMFATARDTLTARFIPVVNRVAEALNTRPG-RINVVGYSDNIPIRNAQFRNNVALS 412
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ RA + + R NR + G PI +N T GR N+RI+I + P
Sbjct: 413 KARAQTVADLIKVRLTDKNR-VRAIGRGSADPIASNATAEGRAQNRRIDITLIP 465
>gi|110638825|ref|YP_679034.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281506|gb|ABG59692.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 320
Score = 93.9 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 2/148 (1%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPM 95
D D + + ++ F + +
Sbjct: 173 DSDGDGVEDYSDLCPSTPGPKTNRGCPELKPAEKAALQKAFDNLLFETGSDVIVSSSFQS 232
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +A +L P + I+ HTD++G + NL +S+ RA +K+YL+ + ++
Sbjct: 233 LDDLAKVLRNNPLYNLYIEGHTDNVGDDEANLDLSKRRAISVKNYLVSK-GVGAARLTTD 291
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
GF P+DTNDT GR+ N+R+E+ I
Sbjct: 292 GFGEARPVDTNDTPEGRKKNRRVEMHIL 319
>gi|326799819|ref|YP_004317638.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326550583|gb|ADZ78968.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 434
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 15 ISGCGLASREKKKV--FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT----------- 61
++ A +E+ + ++ D + DK D
Sbjct: 252 LAAALKAQKEENEALKAQLTTDLADDDGDGVANKFDKCPGTAADAKVDGSGCPLPEAKKV 311
Query: 62 --GIVVSRIGDMIT-CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I V+ + I +S+ + P L +A +L + + + + HTD
Sbjct: 312 VQQITVTEEDRRVVDEAIKNLEFDLSKATIRPTSYPSLDKVARLLVE-KNFSLKLAGHTD 370
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ G++K N+ +S+ERA+ +K+YL+ +G + +R I G+ PI TN T GRQ N+R+
Sbjct: 371 NTGSMKLNMRLSKERAEAVKAYLVSKGANPSR-IEATGYGPTQPIATNATAEGRQANRRV 429
Query: 179 EIQI 182
E +
Sbjct: 430 EFTL 433
>gi|299145942|ref|ZP_07039010.1| OmpA family protein [Bacteroides sp. 3_1_23]
gi|298516433|gb|EFI40314.1| OmpA family protein [Bacteroides sp. 3_1_23]
Length = 297
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + ++ + ++ + + K +L IA I+ + + ++ +TD+
Sbjct: 143 LDIKVLKGVVYISLADNMLYKSGSYEISNKAEAVLSKIAKIIQDYKDYDVLVEGNTDTDP 202
Query: 122 TLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NN +S RA + L + + ++ G P+ NDT G+ N+R
Sbjct: 203 ISRTNIRNNWDLSALRASSVVQALQNVYGINPKRLTAAGRGEFNPVAGNDTAEGKARNRR 262
Query: 178 IEIQIFPR 185
EI I P+
Sbjct: 263 TEIIITPK 270
>gi|332087513|gb|EGI92641.1| ompA family protein [Shigella boydii 5216-82]
Length = 318
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ T + + V + L+ +L + P +I + +T
Sbjct: 183 PEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 242
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 243 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 302
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 303 VEISLVPRSD 312
>gi|323698024|ref|ZP_08109936.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. ND132]
gi|323457956|gb|EGB13821.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans
ND132]
Length = 184
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 63/179 (35%), Gaps = 6/179 (3%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ L + +GC S + ++ + + AE
Sbjct: 10 VALMAVSLLLFAGCAKKSTT----TEPTQSQVEVKDDTQWTPPQPAEPAVDEAALAAEQQ 65
Query: 65 VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + V + F + L + +L ATIL KF + I+ H D GT
Sbjct: 66 ARAKAEAVQELTNVTIHFAFNSYELSDESRSILAQKATILRKFADVNVVIEGHCDERGTE 125
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ NL + + RA +L+ GV R + + +YP+D + N+R E I
Sbjct: 126 EYNLALGERRARAAYEHLVILGVEPERM-KIVSYGEEYPVDPGHNETAWAKNRRDEFVI 183
>gi|242279943|ref|YP_002992072.1| peptidoglycan-associated lipoprotein [Desulfovibrio salexigens DSM
2638]
gi|242122837|gb|ACS80533.1| peptidoglycan-associated lipoprotein [Desulfovibrio salexigens DSM
2638]
Length = 196
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 69/197 (35%), Gaps = 17/197 (8%)
Query: 2 IKELGLSMFIMTTI-----SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA------ 50
++ + + ++ + +GC E + ++
Sbjct: 1 MRSKAIILCVVFMLIAGLGTGCSKKQVESSPASPAVEERMAQQQENEQLKSEEQARLERE 60
Query: 51 ----EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
E + + Q + + + +++++ P+LQ A IL K+
Sbjct: 61 RALQEQALEEERQAAAAK-KEFDNAVVELGNMVHFDFDSFEIKQEYRPLLQQKAEILKKY 119
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ + I+ + D GT + NL + + RA +LI + +S+ F + P+D
Sbjct: 120 DNVTMVIEGYCDDRGTEEYNLALGERRARAAYEFLILL-GVTPERLSIVSFGEEDPLDPG 178
Query: 167 DTKVGRQNNQRIEIQIF 183
+ N+R + ++
Sbjct: 179 QNETAWAKNRRAQFRLT 195
>gi|71275795|ref|ZP_00652079.1| OmpA/MotB [Xylella fastidiosa Dixon]
gi|71900394|ref|ZP_00682527.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|170730225|ref|YP_001775658.1| outer membrane protein P6 [Xylella fastidiosa M12]
gi|71163373|gb|EAO13091.1| OmpA/MotB [Xylella fastidiosa Dixon]
gi|71729826|gb|EAO31924.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|167965018|gb|ACA12028.1| outer membrane protein P6 precursor [Xylella fastidiosa M12]
Length = 178
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 72/182 (39%), Gaps = 12/182 (6%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI- 63
L +S+ + + C +E+ V + K ++ +GI
Sbjct: 8 LLISLLSTSALVACSKKVKEQPHVPV----------KPMAPTVSTPTPTTTAPTDSSGIY 57
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + V + ++K+F +L A L PS I +Q +TD G+
Sbjct: 58 TAADLDTDACLRQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDERGSR 117
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N+ + + R + + Y +Q +S+ ++V + + P+ T T+ N+R+EI
Sbjct: 118 EYNIALGERRGNSVL-YSLQANGASSGQLNVVSYGEERPVCTESTESCWSRNRRVEIVYT 176
Query: 184 PR 185
+
Sbjct: 177 AK 178
>gi|260174718|ref|ZP_05761130.1| OmpA/MotB domain protein [Bacteroides sp. D2]
gi|315922978|ref|ZP_07919218.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313696853|gb|EFS33688.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 297
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + ++ + ++ + + K +L IA I+ + + ++ +TD+
Sbjct: 143 LDIKVLKGVVYISLADNMLYKSGSYEISNKAEAVLSKIAKIIQDYKDYDVLVEGNTDTDP 202
Query: 122 TLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NN +S RA + L + + ++ G P+ NDT G+ N+R
Sbjct: 203 ISRTNIRNNWDLSALRASSVVQALQNIYGINPKRLTAAGRGEFNPVAGNDTAEGKARNRR 262
Query: 178 IEIQIFPR 185
EI I P+
Sbjct: 263 TEIIITPK 270
>gi|259415100|ref|ZP_05739022.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259349010|gb|EEW60764.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 638
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 2/163 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
S ++ +D + + LD E + + Q +
Sbjct: 439 SHQENASAEIARMLSDKLGEAEDYELDITYEAPPEPEDQLMAPALCEAELAAIQRADKIA 498
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++ IA +L + + IQ HTDS G + NL +SQ RA + +
Sbjct: 499 FEPGSATVAADSARVIDKIAKLLQQCGEIPLEIQGHTDSQGREEMNLNLSQARAQSVLNA 558
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L R + + F+ +G+ PI +N T+ GR+ N+RIE ++
Sbjct: 559 LRARRILTGSFV-AKGYGEDNPIASNSTEDGREANRRIEFRLI 600
>gi|126662906|ref|ZP_01733905.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38]
gi|126626285|gb|EAZ96974.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38]
Length = 321
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 75/174 (43%), Gaps = 11/174 (6%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ---DTGIVVSRIGDMITCYIPVH 79
++ + + + + + +++ K ++ L+ G+ V+ + +
Sbjct: 137 KKDLEASSTRLAELEKMMADKEAAMKKLKETLSKSLKAFEGKGLTVTEKDGKVYVSMENK 196
Query: 80 VSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI-------GTLKNNLLISQ 131
+ F S + + ++ + +L + P + I+ HTD+ G ++NN +S
Sbjct: 197 LLFESGSWTVGAEGKKAVKALGEVLGQNPEISVLIEGHTDNDKITGTIGGGVENNWDLST 256
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+RA I + L + + ++ G P+ TND+ G+ N+RIEI + P+
Sbjct: 257 KRATAIVNILGENKAIDKKNLTAAGRGEFAPLMTNDSAEGKAKNRRIEIILTPK 310
>gi|332283607|ref|YP_004415518.1| hypothetical protein PT7_0354 [Pusillimonas sp. T7-7]
gi|330427560|gb|AEC18894.1| hypothetical protein PT7_0354 [Pusillimonas sp. T7-7]
Length = 443
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
++++ + V D + F L +++P+L +A LN+ I
Sbjct: 293 LAPEIRENLLAVRNEVDRSVIILHGDGLFTSGSDELRSEYIPVLSRVADALNQSRG-SIL 351
Query: 113 IQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ ++D++ +N +SQ RAD +K+ L R R + G P+ N+T
Sbjct: 352 VSGYSDNVPIRTVRFPSNWELSQARADAVKALLQDRLTQPER-VRAEGRGDANPVAPNNT 410
Query: 169 KVGRQNNQRIEIQIF 183
R N+R+EI +
Sbjct: 411 PANRARNRRVEITLL 425
>gi|50120313|ref|YP_049480.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium
atrosepticum SCRI1043]
gi|49610839|emb|CAG74284.1| peptidoglycan-associated lipoprotein precursor [Pectobacterium
atrosepticum SCRI1043]
Length = 169
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 68/181 (37%), Gaps = 18/181 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + ++ C + + +++ SS ++A + Q ++
Sbjct: 6 VLKGLMLALPV-LAVAACSSNKNADNDQSSMGAGNNGMMDGGNASSSEQARLQMQELQRN 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + +F ML A L PS + I+ H D
Sbjct: 65 NIV----------------YFGLDKYDVSSEFAQMLDAHAAFLRSNPSYKVTIEGHADER 108
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S+ IS+ + + P + N+R +
Sbjct: 109 GTPEYNIALGERRANAV-QMYLQGKGVSSDQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 167
Query: 181 Q 181
Sbjct: 168 V 168
>gi|269961586|ref|ZP_06175948.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833627|gb|EEZ87724.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 318
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I ++ L+ + L + LN++P + + +TD+ G N +S++RA
Sbjct: 203 TIGTGSFALNSTTLKPESAAKLDDLVAFLNEYPQANVDVIGYTDTSGPAAYNQKVSEKRA 262
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + L+++G+ ++R I RG PI +N+T+ GR+ N+R+E+ +
Sbjct: 263 ESVANALVEKGIDADR-IHARGEGENNPIASNETREGREQNRRVEVVV 309
>gi|242278087|ref|YP_002990216.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242120981|gb|ACS78677.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 356
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + +P L AT+L +FP+ + + HTDS G+ N +S+ R
Sbjct: 247 IVFRNFNFGFDKYQITDEMVPALTEAATMLEEFPNLKVLVGGHTDSSGSEAYNQGLSERR 306
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A + +L + + + V+G+ P N TK GR+ N+R+EI +
Sbjct: 307 AKSVADWLAAN-GIAPKRLEVKGYGEMNPKYDNKTKEGRKLNRRVEIDV 354
>gi|291286826|ref|YP_003503642.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
gi|290883986|gb|ADD67686.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 368
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
D D+ + + G+ V+ G T + +++ ++
Sbjct: 227 TPDTDGDGVYDFEDRCPNTIK------GVKVNSAGC-FTARTLDVRFKTNSSEIDESYVD 279
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+ L + P+ I IQ H DS GT N+++S++RA + L ++ + ISV
Sbjct: 280 DIILFVKFMKDSPAINIEIQGHADSRGTDDYNMVLSEKRAKSVAKMLTEKYGIAENRISV 339
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G+ PI ND+ + N+RI+ I
Sbjct: 340 IGYGETKPIAPNDSPENMRKNRRIDTVI 367
>gi|311104908|ref|YP_003977761.1| outer membrane protein A [Achromobacter xylosoxidans A8]
gi|310759597|gb|ADP15046.1| outer membrane protein A [Achromobacter xylosoxidans A8]
Length = 193
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + +L +A I HTDSIGT N +S+ RA +
Sbjct: 85 DTFFDFDKSTLKPEGRQLLDQVAQQARGIDLETIIAVGHTDSIGTEAYNQKLSERRAASV 144
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + I G PI +N TK GR N+R+EI+I
Sbjct: 145 KTYLVSK-GIDPNRIYTEGKGELNPIASNKTKEGRAQNRRVEIEIV 189
>gi|228469678|ref|ZP_04054646.1| immunogenic 23 kDa lipoprotein PG3 [Porphyromonas uenonis 60-3]
gi|228308697|gb|EEK17423.1| immunogenic 23 kDa lipoprotein PG3 [Porphyromonas uenonis 60-3]
Length = 225
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 43 FGSSLDKAEDEFQMQL-QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF-LPMLQLIA 100
G+ +DK + E + QL + T + G I + F + L+ A
Sbjct: 69 IGNRMDKQKKELEQQLPEGTQVESVNDGQAIKVVFDSGLLFNTSSSTLSSSSRNDLRKFA 128
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
LNK TV+ I HTDS G + N +S++RA ++ ++ S+ + G
Sbjct: 129 DNLNKNHDTVLEIIGHTDSSGNDRINDPLSRDRAKSVRD-FLEGQGVSSTRMKYEGRGSH 187
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
P+DTN T G++ N+R+E+ I P +
Sbjct: 188 EPVDTNATAEGKRKNRRVEVFILPSQKM 215
>gi|323720608|gb|EGB29686.1| outer membrane protein A ompA [Mycobacterium tuberculosis CDC1551A]
Length = 291
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L +L +A L P + I +TD+ G+ N+ +S +RA ++ Y
Sbjct: 190 FGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADY 249
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ R + I+ G PI +N T GR N+R+EI +
Sbjct: 250 LVAR-GVAGDHIATVGLGSVNPIASNATPEGRAKNRRVEIVV 290
>gi|293369806|ref|ZP_06616382.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
gi|292635228|gb|EFF53744.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
Length = 297
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + ++ + ++ + + K +L IA I+ + + ++ +TD+
Sbjct: 143 LDIKVLKGVVYISLADNMLYKSGSYEISNKAEAVLSKIAKIIQDYKDYDVLVEGNTDTDP 202
Query: 122 TLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NN +S RA + L + + ++ G P+ NDT G+ N+R
Sbjct: 203 ISRTNIRNNWDLSALRASSVVQALQNVYGINPKRLTAAGRGEFNPVAGNDTAEGKARNRR 262
Query: 178 IEIQIFPR 185
EI I P+
Sbjct: 263 TEIIITPK 270
>gi|168180924|ref|ZP_02615588.1| chemotaxis motB protein [Clostridium botulinum NCTC 2916]
gi|237796091|ref|YP_002863643.1| chemotaxis motB protein [Clostridium botulinum Ba4 str. 657]
gi|182668356|gb|EDT80335.1| chemotaxis motB protein [Clostridium botulinum NCTC 2916]
gi|229263486|gb|ACQ54519.1| chemotaxis protein MotB [Clostridium botulinum Ba4 str. 657]
Length = 247
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 10/181 (5%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDM 71
SG + K + +T + + GS E + + V G
Sbjct: 63 SGDSIVDYNMKNGDIPLVGETTKLGRETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRG 122
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNN 126
I + +V F ++ + ++ I ++ P+ + I+ HTD++ +N
Sbjct: 123 IIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPN-EVIIEGHTDNVPIKNEVYGSN 181
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S RA + Y ++ + + G+ PI N++ R N+R+ I I +
Sbjct: 182 WELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRSKNRRVNIVIVSKE 241
Query: 187 N 187
Sbjct: 242 K 242
>gi|160899279|ref|YP_001564861.1| hypothetical protein Daci_3845 [Delftia acidovorans SPH-1]
gi|160364863|gb|ABX36476.1| type IV / VI secretion system protein, DotU family [Delftia
acidovorans SPH-1]
Length = 443
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 61/151 (40%), Gaps = 7/151 (4%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFL-EKKFLPML 96
+ + + ++++ + V D T + F + + +++ ++
Sbjct: 274 SAAATVATLKPRLRQFLEPEIREGLVSVRDEADRSTVILRGDGLFDPAATVVKPRYVQVI 333
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFI 152
+A L++ P + + +TD++ +N +SQERA + L R +
Sbjct: 334 HRVAAALDEVPG-KVVVNGYTDNLPIRTARFPSNWNLSQERAQAVSQMLGGSLRDRQR-L 391
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
G A P+ N+T GR N+R+EI +
Sbjct: 392 HAEGRADSDPVAPNNTAEGRALNRRVEIVLL 422
>gi|257453916|ref|ZP_05619193.1| inner membrane lipoprotein YiaD [Enhydrobacter aerosaccus SK60]
gi|257448688|gb|EEV23654.1| inner membrane lipoprotein YiaD [Enhydrobacter aerosaccus SK60]
Length = 216
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 63/171 (36%), Gaps = 9/171 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG--DMITCYIPV 78
+ + + ++ G + + E + + + +G+ V+R + I IP
Sbjct: 51 SKATGGEKTGRDAAIGGVLGAGVGYYMQQQEAKLRAETAGSGVTVTRDPVTNNINLSIPE 110
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++F + + F L +AT L + T I + + G N +SQ RA +
Sbjct: 111 AITFRVGDSTILPNFYNTLDKVATTLRDYNQTNIQVNGYASVEGDANRNQALSQRRASAV 170
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ + S IS G T + N+R+E+ I ++
Sbjct: 171 AN-YLVNRGISGNRISAIGRG-----ATTQFGSSYEPNRRVEMIILAPQSV 215
>gi|157692040|ref|YP_001486502.1| flagellar motor protein MotB [Bacillus pumilus SAFR-032]
gi|157680798|gb|ABV61942.1| flagellar motor protein B [Bacillus pumilus SAFR-032]
Length = 254
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 5/142 (3%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
+ + + + + + I + F + + +P+ + I+ +L
Sbjct: 107 KQVDSFIANKKLGAKLETKLTDEGLLITIEDSIFFDSGRAVIRPQDVPLAKEISKLLVIN 166
Query: 107 PSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I I HTD++ ++N +S RA S L++ + S +GF P
Sbjct: 167 PARDIVISGHTDNVPIRNSDFESNWYLSAIRAVNFLSILLENSNLNQENFSTKGFGEFKP 226
Query: 163 IDTNDTKVGRQNNQRIEIQIFP 184
I +NDT GR N+R+E+ I P
Sbjct: 227 IASNDTAEGRSKNRRVEVLILP 248
>gi|167625831|ref|YP_001676125.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167355853|gb|ABZ78466.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 201
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 75/181 (41%), Gaps = 12/181 (6%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT-G 62
+ + + + + GC + + T VN D + + T G
Sbjct: 2 KTMIFLLSLAILGGCSM------RDITTMDQPTTQVNDLSDIDHDGVIVARERCTETTLG 55
Query: 63 IVVSRIGDMITCYIPV-----HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ G I + +++ ++ P +++IAT + +P+T I+ H
Sbjct: 56 ATIDNYGCGKIKPINERQELKVLFANDSYYIDPQYYPQVEVIATFMRDYPNTQAVIEGHC 115
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ ++N ++SQ RA+ + S L +R + +S G+++ P+D T+ + N+R
Sbjct: 116 SKTGSHEHNQVLSQNRANAVSSLLAERFGIDSDRLSAVGYSFDRPVDPTHTRAAHKVNRR 175
Query: 178 I 178
+
Sbjct: 176 V 176
>gi|302037323|ref|YP_003797645.1| hypothetical protein NIDE1997 [Candidatus Nitrospira defluvii]
gi|300605387|emb|CBK41720.1| conserved exported protein of unknown function, putative Outer
membrane protein OmpA [Candidatus Nitrospira defluvii]
Length = 325
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 54/109 (49%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ L P LQ +AT+L P + + HTD+IG+ + N ++SQ
Sbjct: 215 RVSLYGLYFDTNKAELRPDSEPTLQEMATLLKGRPQLKLLVVGHTDNIGSYEENGILSQR 274
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA + + L + + ++ G ++ PI +N T+ GR N+R+E+
Sbjct: 275 RAHAVINALASKHGIAKARLTPVGDSFSAPIASNKTEEGRAKNRRVELV 323
>gi|189426515|ref|YP_001953692.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ]
gi|189422774|gb|ACD97172.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ]
Length = 188
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 62/184 (33%), Gaps = 3/184 (1%)
Query: 2 IKELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
K + +++ ++ ++ GC KK + + + K E+ Q +
Sbjct: 5 FKGMVVALGVVAMMAAGCAKEEVVKKDEPVVEQQTVKQQEPVKPVEVPKQEEPKQEAPKQ 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDS 119
+ + + L + L A L K I I+ H D
Sbjct: 65 EEATATAAKASEAVALETVYFDFDKSDLRQDARDALSKNAEALLKKVADAKIKIEGHCDE 124
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + NL + RA + YL GV ++R IS + + P + N+R E
Sbjct: 125 RGSDEYNLALGDRRAKSVAKYLTTLGVKADR-ISTISYGKEKPAVQGSDEAAWSKNRRAE 183
Query: 180 IQIF 183
I
Sbjct: 184 FVIV 187
>gi|28198797|ref|NP_779111.1| outer membrane protein P6 precursor [Xylella fastidiosa Temecula1]
gi|28056888|gb|AAO28760.1| outer membrane protein P6 precursor [Xylella fastidiosa Temecula1]
Length = 187
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 67/181 (37%), Gaps = 9/181 (4%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L +S+ + + C +E+ V + S
Sbjct: 16 LLISLLSTSALVACSKKVKEQPHVPVK--------PMAPTVSTPTPPTATAPTDSSGLYT 67
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + V + ++K+F +L A L PS I +Q +TD G+ +
Sbjct: 68 AADLDTDACLRQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDERGSRE 127
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ + + R + + Y +Q +S+ ++V + + P+ T T+ N+R+EI
Sbjct: 128 YNIALGERRGNSVL-YSLQANGASSGQLNVVSYGEERPVCTESTESCWSRNRRVEIVYTA 186
Query: 185 R 185
+
Sbjct: 187 K 187
>gi|152996217|ref|YP_001341052.1| peptidoglycan-associated lipoprotein [Marinomonas sp. MWYL1]
gi|150837141|gb|ABR71117.1| Peptidoglycan-associated lipoprotein [Marinomonas sp. MWYL1]
Length = 192
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 69/184 (37%), Gaps = 7/184 (3%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK-----AEDEFQMQL 58
+ + I+GC + + + + ++ + D+ D +
Sbjct: 8 KFAVIGLSAAWIAGCSTTATDTDSSTVAEDANSTEQTNGAAENTDQAFGAGQGDAMTSVI 67
Query: 59 QDTGIVVSRIG-DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + + G D + V + + + L A L P I ++ H
Sbjct: 68 VEEEVTTNDNGMDSLAGVQTVFYFDFDKSIVRPESREALAKHAEYLVSHPDARIVLEGHA 127
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + N+ + + RA I YL +GV++++ +V F + P+ Q N+R
Sbjct: 128 DERGTREYNMALGERRAKAISRYLTIQGVAASQIETVS-FGEEVPVAFGHDSNAWQLNRR 186
Query: 178 IEIQ 181
+E++
Sbjct: 187 VEVR 190
>gi|225012121|ref|ZP_03702558.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
gi|225003676|gb|EEG41649.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
Length = 298
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 9/146 (6%)
Query: 49 KAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILN 104
+ + L + G+ V + + + + F S + + L + T+L
Sbjct: 143 ELKKRLSDALLNFEGKGLTVEQRNGKVYISMENKLLFKSGSWNVGSQGQEALGQLGTVLA 202
Query: 105 KFPSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ P V+ I+ HTD++ ++N +S +RA + L+ + ++ G +
Sbjct: 203 ENPDIVVVIEGHTDNVPFSPKEALESNWDLSTKRATAVVKILLNNESVLPQNLTAAGRSE 262
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFPR 185
PI N+ GR N+RIEI + P+
Sbjct: 263 YVPIAPNNNATGRAVNRRIEIILSPQ 288
>gi|323495160|ref|ZP_08100245.1| peptidoglycan-associated lipoprotein [Vibrio brasiliensis LMG
20546]
gi|323310600|gb|EGA63779.1| peptidoglycan-associated lipoprotein [Vibrio brasiliensis LMG
20546]
Length = 175
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 70/181 (38%), Gaps = 12/181 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ + ++ C + ++N T V+ S +D+ + +L++
Sbjct: 6 VLKGLLIALPV-LAVTACSSSDDAANASGSTETNQTQTVDNTVVSPIDQNGQLSEQELKE 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A L+K P+ + I+ H D
Sbjct: 65 QALRETQT----------IYFAFDNSTIAGDYEEMLAAHAAYLSKNPALNVTIEGHADER 114
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + YL IS+ + + P+ ++ N+R +
Sbjct: 115 GTPEYNIALGERRATAVAKYLQAL-GVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAVL 173
Query: 181 Q 181
Sbjct: 174 V 174
>gi|167583745|ref|ZP_02376133.1| hypothetical protein BuboB_00307 [Burkholderia ubonensis Bu]
Length = 405
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFP 107
+ + ++ + V D + F S + ++LP+L +A LNK P
Sbjct: 254 RIAKFLEPEIAAGLVSVRDDADRSVIVLRGDGLFQSGATSVIDRYLPVLARVADALNKVP 313
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +TD +N +S+ERA+ + L+ + ++ +G P+
Sbjct: 314 G-NVRVSGYTDDTPVHTARFASNWDLSRERAESV-RSLLAARLDRPERLAAQGRGTLDPV 371
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
NDT R N+R+EI +
Sbjct: 372 APNDTPANRARNRRVEITLL 391
>gi|39997403|ref|NP_953354.1| peptidoglycan-associated lipoprotein [Geobacter sulfurreducens PCA]
gi|39984294|gb|AAR35681.1| peptidoglycan-associated lipoprotein [Geobacter sulfurreducens PCA]
Length = 187
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 8/186 (4%)
Query: 2 IKELGLSMFIMTTIS---GCGLAS---REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+K + ++ + +I+ GC E V +++D E
Sbjct: 1 MKYVHATLLVAFSIACAAGCAKKELVVPEPAVVSAPAQLPATETVAPPATTIDAHESIAA 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + I + + + + L + +L A L K P + ++
Sbjct: 61 TDIAEDRITPAGNATQASP-LKIVYFDFDAWVLNGEAREILAGNAEWLRKNPGVAVILEG 119
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD G+ NL + ++RA YL G+ + R +V + + P + N
Sbjct: 120 HTDERGSDAYNLALGEQRAKSAMKYLQTLGIDAGRM-TVVSYGEEKPAVEGHDESAWAGN 178
Query: 176 QRIEIQ 181
+R+E
Sbjct: 179 RRVEFI 184
>gi|134300281|ref|YP_001113777.1| OmpA/MotB domain-containing protein [Desulfotomaculum reducens
MI-1]
gi|134052981|gb|ABO50952.1| OmpA/MotB domain protein [Desulfotomaculum reducens MI-1]
Length = 261
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 71/191 (37%), Gaps = 14/191 (7%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDT----DIVNKRFGSSLDKAEDEFQMQLQDT 61
++ + T+ G + ++++ + + ++K + + Q +
Sbjct: 47 AIASSLAKTMGGSQSIMESGGPSMVPGASESKELDTAMEQIEQQKMEKIKKQIQEYVDKN 106
Query: 62 G----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G + V+ + V F L ++ + IL++ P+ I ++ H
Sbjct: 107 GLSGKVTVAIEERGVVVSFQDVVLFPLGVADLVPHSQGIVDKVGAILSQTPNY-IRVEGH 165
Query: 117 TDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD++ N N +S R+ + LI +S G+ P ND+ R
Sbjct: 166 TDNLPIQTNKFPSNWELSLARSASVVHRLINFSHIPPDRLSATGYGEYRPRRANDSDANR 225
Query: 173 QNNQRIEIQIF 183
Q N+R++I +
Sbjct: 226 QQNRRVDIIVL 236
>gi|313674269|ref|YP_004052265.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312940967|gb|ADR20157.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 526
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVS--RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
G DK + ++ + + + + T + + ++ L
Sbjct: 381 SVEGYLDDKQTIKTDSIEDNSTVKLELLSLKEGTTIQLKSVLFKRGTSEIKDGSFEELDR 440
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ T+L K P+ I + HTD+ G+ K N+ +SQ+R+D IK YL+++ + + + +G+
Sbjct: 441 VYTMLKKNPTVEIELAGHTDNTGSAKLNIELSQKRSDKIKEYLVEK-GINPKRLQSKGYG 499
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIF 183
PI +N ++ R+ N+R+E I
Sbjct: 500 GARPIASNKSEATRKLNRRVEFTII 524
>gi|160884511|ref|ZP_02065514.1| hypothetical protein BACOVA_02495 [Bacteroides ovatus ATCC 8483]
gi|298481223|ref|ZP_06999417.1| OmpA family protein [Bacteroides sp. D22]
gi|156110250|gb|EDO11995.1| hypothetical protein BACOVA_02495 [Bacteroides ovatus ATCC 8483]
gi|298272797|gb|EFI14364.1| OmpA family protein [Bacteroides sp. D22]
Length = 297
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + ++ + ++ + + K +L IA I+ + + ++ +TD+
Sbjct: 143 LDIKVLKGVVYISLADNMLYKSGSYEISNKAEAVLSKIAKIIQDYKDYDVLVEGNTDTDP 202
Query: 122 TLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NN +S RA + L + + ++ G P+ NDT G+ N+R
Sbjct: 203 ISRTNIRNNWDLSALRASSVVQALQNIYGINPKRLTAAGRGEFNPVAGNDTAEGKARNRR 262
Query: 178 IEIQIFPR 185
EI I P+
Sbjct: 263 TEIIITPK 270
>gi|114320567|ref|YP_742250.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226961|gb|ABI56760.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 326
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 1/147 (0%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
D V+K ++ + A L + + D I + V+ +
Sbjct: 177 DGPAVSKAIVTAEEMATAMEHKPLTAGEMETGLVEDG-RVAIQNILFAVNSAEILPDSAD 235
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L+ IA ++++ P + + HTDS G NL +S ERA+ + +L + +
Sbjct: 236 ALEAIAELMSEQPDLTLLVVGHTDSTGDYDYNLTLSMERAEAVVRWLQREHGIDGDRLQA 295
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G P+ +N T+ GR N+R+E+
Sbjct: 296 AGAGMMAPVTSNRTEAGRAENRRVELV 322
>gi|153834458|ref|ZP_01987125.1| outer membrane protein OmpA [Vibrio harveyi HY01]
gi|148869154|gb|EDL68186.1| outer membrane protein OmpA [Vibrio harveyi HY01]
Length = 318
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I ++ L+ + L + LN++P + + +TD+ G N +S++RA
Sbjct: 203 TIGTGSFALNSTTLKPESAAKLDDLVAFLNEYPQANVDVIGYTDTSGPAAYNQKVSEKRA 262
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + L+++G+ ++R I RG PI +N+T+ GR+ N+R+E+ +
Sbjct: 263 ESVAHALVEKGIDASR-IHARGEGENNPIASNETREGREQNRRVEVVV 309
>gi|332559394|ref|ZP_08413716.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
gi|332277106|gb|EGJ22421.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
Length = 310
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G ++ R+ + + V LE + P L +A L + P+ + I HTD+ G
Sbjct: 187 GTLIPRLEETGAAVLEELVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDASG 246
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L+ N+ +S+ RA ++ LI R ++ G Y P TN T+ GR N+R+E+
Sbjct: 247 GLEGNVTLSRARAASVRERLIARHGVDGAQVTADGVGYLAPRATNRTEEGRARNRRVEVM 306
Query: 182 IF 183
+
Sbjct: 307 LL 308
>gi|261253628|ref|ZP_05946201.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
gi|260937019|gb|EEX93008.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
Length = 324
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L + L + LN +P + I +TD+ G + N ++S++RA
Sbjct: 209 QLGSGSFKLNSTELNQDSADQLDELVEFLNTYPQANVEIIGYTDTSGAAEYNQVVSEKRA 268
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + ++ + I+ RG PI +N+T+ GR+ N+R+E+ +
Sbjct: 269 ESV-ATTLEEKGIDSSRITARGEGENNPIASNETREGREQNRRVEVIV 315
>gi|78224682|ref|YP_386429.1| OmpA/MotB [Geobacter metallireducens GS-15]
gi|78195937|gb|ABB33704.1| OmpA/MotB [Geobacter metallireducens GS-15]
Length = 194
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 68/191 (35%), Gaps = 10/191 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLH-KSNDTDIVNKRFGSSLD-------KAED 52
M+ + + + ++GC KK + SN T + D E
Sbjct: 4 MLCRVTMLSIGILAVAGCAKNETIKKDEMVPVASNKTAQAAVAKPAVKDGGIKTPPAKEV 63
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ + Q ++ + + + L + L A +L S +
Sbjct: 64 QSKDQSKEGAAKGTMTEAQLQAALTKIFFNFDSSVLSSEGRETLVKNAELLKS-ASFKVR 122
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ + D G+ + NL + + RA YL+ GV ++R +S+ + + P D +
Sbjct: 123 IEGNCDERGSDEYNLALGERRAQAAMKYLLTMGVPADR-LSIISYGEEKPADPGHDEAAW 181
Query: 173 QNNQRIEIQIF 183
N+R E +
Sbjct: 182 AKNRRDEFVVM 192
>gi|163939534|ref|YP_001644418.1| flagellar motor protein MotS [Bacillus weihenstephanensis KBAB4]
gi|163861731|gb|ABY42790.1| OmpA/MotB domain protein [Bacillus weihenstephanensis KBAB4]
Length = 227
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 62/150 (41%), Gaps = 9/150 (6%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIV---VSRIGDMITCYIPVH-VSFVSEVFLEKKFLPML 96
+D+ + + + + G+ V R I+ I + + + ++ + ++
Sbjct: 77 AVSKKRMDELYKKLKAYVDNNGVSQVNVYREDTGISIVIVDNLIFDTGDANVKPEAKEVI 136
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNN----LLISQERADVIKSYLIQRGVSSNRFI 152
+ P+ I ++ HTDS N +S RA + +LI+ ++ +
Sbjct: 137 SQLVGFFQSVPN-PIVVEGHTDSRPIHNENFPSNWELSSARAANMIHHLIEVYNVDDKRL 195
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G+A P+ +ND+ + N+R+ I I
Sbjct: 196 AAVGYADTKPVASNDSPQNWEKNRRVVIYI 225
>gi|148262285|ref|YP_001228991.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146395785|gb|ABQ24418.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 194
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 61/190 (32%), Gaps = 8/190 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD-------IVNKRFGSSLDKAEDE 53
M+ + + + GC K + + S T+ + + +
Sbjct: 5 MVGLVTVLFCGALLVGGCAKKEMVKGEEGVVPSAATEKPAVTPPAKPSMTEEVVKEQPIK 64
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ + I + + + L + +L A L K + I
Sbjct: 65 EATTIAEASIKEQPVTAVAATELGKVYFDFDSFVLTQTSRDILSNNAKWLLKTGRAKVQI 124
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ H D G+ + NL + ++RA +YL+ +SV + + P D +
Sbjct: 125 EGHCDERGSDEYNLALGEKRAKSAMNYLVTL-GVPADQLSVISYGKEKPADPGHNEAAWA 183
Query: 174 NNQRIEIQIF 183
N+R E I
Sbjct: 184 KNRRAEFVII 193
>gi|262198074|ref|YP_003269283.1| hypothetical protein Hoch_4901 [Haliangium ochraceum DSM 14365]
gi|262081421|gb|ACY17390.1| Myxococcales GC_trans_RRR domain protein [Haliangium ochraceum DSM
14365]
Length = 1987
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 71/185 (38%), Gaps = 20/185 (10%)
Query: 17 GCGLASREKKKVFLHKSN--------------DTDIVNKRFGSSLDKAEDEFQMQLQDT- 61
GC ++ V DTD LD DE +
Sbjct: 1764 GCPDEDNDEDGVVDSADKCPNEAGPVENRGCPDTDRDGDGVVDRLDNCPDEAGSERNQGC 1823
Query: 62 --GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTD 118
V GD + + + L+++ P+LQ +A +L P + ++ HTD
Sbjct: 1824 KRRQRVRLSGDRLEI-LDRVYFRSNRAVLQRRSNPLLQNVAQVLIAHPEIEHVRVEGHTD 1882
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ G N+ +SQ RA+ + + + + + ++ GF P++ N T+ GR N+R+
Sbjct: 1883 NRGDPTYNMNLSQSRAEAVVA-FLVQEGVEAKRLAAVGFGETQPLEDNKTRRGRAANRRV 1941
Query: 179 EIQIF 183
E I
Sbjct: 1942 EFNIL 1946
>gi|159025750|emb|CAO02049.1| outer membrane protein A [Bordetella holmesii]
Length = 177
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + +L +A I HTDSIGT NL +S RA +
Sbjct: 68 DTFFDFDKSVLKPEGRQLLDQVAQQAKAIDLETIIAVGHTDSIGTEAYNLKLSDRRAASV 127
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + I G PI TN T GR N+R+EI+I
Sbjct: 128 KAYLVSK-GIDPNRIYTEGKGEAQPIATNKTAEGRARNRRVEIEIV 172
>gi|332297244|ref|YP_004439166.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
gi|332180347|gb|AEE16035.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
Length = 436
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV---VSRIGDMITCYIPVHVSFVSEVFL 88
V + S D+ + + ++ GI V +T + L
Sbjct: 281 SGKAQAEVQEFASRSADRL-ADVRERIDQLGIENAQVRADEKGLTISLENIQFKADSAVL 339
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ L+ IA IL+ FP + I HT GT + +S++RA + YL+Q G+
Sbjct: 340 LESEKMKLRKIAEILSLFPENDLLITGHTALAGTAASRTALSEQRAKAVAEYLMQLGIRD 399
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ I +G ++PI N T+ + N+R+EI + +
Sbjct: 400 SYHIFTQGLGGEHPIAPNTTEANKARNRRVEITVMDK 436
>gi|325297821|ref|YP_004257738.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM
18170]
gi|324317374|gb|ADY35265.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170]
Length = 239
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 79/222 (35%), Gaps = 41/222 (18%)
Query: 1 MIKELGLSMFIM--TTISGCGL---ASREKKKVFLHKSNDTDIVNKRFGSSL-------- 47
M K +++ + +SGCG ++ + ++ G
Sbjct: 1 MKKTSCMAILLSGCLILSGCGSLNNTAKGGMIGGGSGAALGALIGGIAGHGKGAAIGAAV 60
Query: 48 -------------DKAEDEFQMQLQDTGIVVSRIGDM-----ITCYIPVHVSF-VSEVFL 88
K + + Q G V ++ D + + F S L
Sbjct: 61 GAAVGTGAGVLIGKKMDKAAEQAAQIEGAEVEQVTDNNGLQAVKVTFDSGILFATSSSDL 120
Query: 89 EKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL--------KNNLLISQERADVIKS 139
L A L + P +AI +TD+ G + NL +SQ RA + +
Sbjct: 121 STSAKSALSKFANNVLIQNPDMDVAIYGYTDNTGWKNSTAEQSVQKNLELSQSRAQSVSN 180
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
YL + G ++++ +V G P+ N T+ GRQ N+R+E+
Sbjct: 181 YLRECGTTTSQIKTVEGLGESNPVADNSTEAGRQENRRVEVY 222
>gi|198276042|ref|ZP_03208573.1| hypothetical protein BACPLE_02226 [Bacteroides plebeius DSM 17135]
gi|198271671|gb|EDY95941.1| hypothetical protein BACPLE_02226 [Bacteroides plebeius DSM 17135]
Length = 280
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 6/154 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
D N + + L+ +D + V + + + F L+K+
Sbjct: 118 DQQNAQVQNLLNSVKDALLG-FSSDELTVREQNGKVYVAMSDKLLFQSGSAKLDKRGEEA 176
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L +A +LNK + I+ HTD+ K+N +S RA + LI++ +
Sbjct: 177 LGKLAEVLNKQTEIDVCIEGHTDNKPIHTAQFKDNWDLSVIRATSVVRILIEKYKVNPLQ 236
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
I G P+ N+T GR N+R EI + P+
Sbjct: 237 IQPSGRGEFMPVADNETAEGRAKNRRTEIIMSPK 270
>gi|152993615|ref|YP_001359336.1| hypothetical protein SUN_2037 [Sulfurovum sp. NBC37-1]
gi|151425476|dbj|BAF72979.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 232
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 79/224 (35%), Gaps = 38/224 (16%)
Query: 2 IKELGLSMFIMTTISGCGLASRE----------------------KKKVFLHKSNDTDIV 39
IK + L + GC K + +
Sbjct: 6 IKTVTLVSIATALLGGCASTGTSNTTDGLIGGAALGALAGQAIGHDTKSTMIGAAIGTAA 65
Query: 40 NKRFGSSLDKAEDEFQMQL-------------QDTGIVVSRIGDMITCYIPVHVSFV-SE 85
G SLD+ ++ L + ++VS G + + F
Sbjct: 66 GGLIGYSLDQQANDIARSLGTGVNNDPLAYLDPNQDLIVSNNGRYVKIMFRDRMMFPTGS 125
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L + + IL ++P T++ + TD G N +S+ RA + L + G
Sbjct: 126 SRLTSSASYKVGKVGKILREYPQTIVQVAGFTDDRGGYDYNYRLSRNRAKTVSDRLYREG 185
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+++ +++ G +Y P+ N+++ N+R+EI ++P +++
Sbjct: 186 INNPSYVT--GCSYNKPLVPNNSERNMALNRRVEIYLYPNNDVR 227
>gi|330959642|gb|EGH59902.1| hypothetical protein PMA4326_13904 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 220
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 81/218 (37%), Gaps = 38/218 (17%)
Query: 2 IKELGLSMFIMT---TISGCGLASREKKKVFLHKSND-----------TDIVNKRFGS-- 45
+K + + + +SGC + + ++ F + V G+
Sbjct: 1 MKNVIKAAALALCFAIVSGCSVNPQTGEREFNRTAIGTTVGGVAGGILGAAVGGERGALV 60
Query: 46 --------------SLDKAEDEFQMQLQDTGIVVSRIGDMIT------CYIPVHVSF-VS 84
+DK + + +L+ G+ + D +T P ++F
Sbjct: 61 GIAAGAALGGGTGYWMDKRSAKLKEELRQKGMDATTSLDPVTGRQMMTVQAPSDIAFATG 120
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L+ L +A L ++ I HTDS G+ + N L+S RA + +
Sbjct: 121 SADLQPAAFQGLSAVANALKDQKDLMLNITGHTDSTGSRQFNNLLSYARAQAVAQ-YLYA 179
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I+VRG P+ T+ T GR N+R+EIQI
Sbjct: 180 AGVPAQVIAVRGVGPSMPVATDATSQGRAQNRRVEIQI 217
>gi|124516288|gb|EAY57796.1| putative flagellar motor protein (OmpA/MotB) [Leptospirillum
rubarum]
Length = 261
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 6/159 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKK 91
S + + E Q + + V + + I I F S + +K
Sbjct: 74 STPGKATPQVQSVMIRALELLVQKSSEKGDMKVVQTKEGIVLRIQSRFLFASGHARVRRK 133
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVS 147
+P+L+ IA +L + + I + +TD+ NN +S RA + + L++ G
Sbjct: 134 AVPVLRKIAALLART-NHEIRVHGYTDNQPIRTSRYPNNWALSTMRAVNVLTRLLEYGSI 192
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ GF PI +N T GR+ N+R+EI I R
Sbjct: 193 DPGRMGAAGFGKFRPIASNLTPEGREKNRRVEILIMNRE 231
>gi|83854895|ref|ZP_00948425.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
gi|83842738|gb|EAP81905.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
Length = 632
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 2/170 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + + + + A E + ++
Sbjct: 435 AGNTGNPDASTQIATLLAGKLGEGKDYEVKVAYQEKLDPVLGLPTPQECEAEIGKVVAKG 494
Query: 79 HV-SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ L + IA IL + +Q +TDS G + NL +SQ RA +
Sbjct: 495 KINFEPGSATIDASTLGTMDQIAEILQDCRDIALEVQGYTDSQGREEMNLALSQSRAQSV 554
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ L R V + F+ +G+ + P+ +NDT+ GR+ N+RIE ++ G
Sbjct: 555 LNELRARRVITGSFV-AKGYGEESPVASNDTEEGREANRRIEFKLINEGT 603
>gi|297569175|ref|YP_003690519.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925090|gb|ADH85900.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2]
Length = 251
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 8/149 (5%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNK 105
+ + F+ + V +T I V+F L++ F +L + IL
Sbjct: 90 EPIQQLFRELEDAGLVTVEEDEAGEVTVRIRDSVAFAFGRADLKEDFKALLDQLGEILVT 149
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADV-----IKSYLIQRGVSSNRFISVRGFAYK 160
+T++ ++ HTD++ S + YL++ ++ +A
Sbjct: 150 SQATMV-VEGHTDNVPMRPGAPFSSNWALSAARSVAVVEYLLEHYEIPRDRLAAEAYADS 208
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P+ NDT GR N+R+E +I P +++
Sbjct: 209 RPVAPNDTAEGRAANRRVEFRIRPGEDLR 237
>gi|157960193|ref|YP_001500227.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157845193|gb|ABV85692.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 201
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 78/178 (43%), Gaps = 6/178 (3%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN--KRFGSSLDKAEDEFQMQLQDT 61
++ L + + + GC + + ND ++ + E + +
Sbjct: 2 KIILVLLSLAILGGCSMRDIATMDEPTVQVNDLSDIDHDGVIVARERCNETALGATIDNY 61
Query: 62 GI-VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G + I + I + +++ ++ P +++IA+ + KFP+T I+ H
Sbjct: 62 GCGKIKPINERQELKI---LFANDSYYIDPQYYPQVEVIASFMQKFPNTQAVIEGHCSKT 118
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ ++N ++SQ RA+ + S L +R + +S G+++ PID T + N+R+
Sbjct: 119 GSHQHNQVLSQNRANAVSSLLAERFGIDSGRLSAVGYSFDRPIDPTHTASAHKINRRV 176
>gi|115523809|ref|YP_780720.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115517756|gb|ABJ05740.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 446
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + + K+ LP+L+ + IL + P+ I + HT
Sbjct: 320 IPAAPAQVCQSKLAAVVAAEKITFQPRSAEISKESLPVLEKLGAILVQCPAVTIEVAGHT 379
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQ-RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
D G N +S+ RA+ + + L + + + ++ G+ PI +NDT GR NN+
Sbjct: 380 DGGGKKAKNQALSERRAEAVVASLTKAKIGVGSAKLTAVGYGSAKPIASNDTPEGRANNR 439
Query: 177 RIEIQI 182
RIE +
Sbjct: 440 RIEFVV 445
>gi|229058360|ref|ZP_04196744.1| OmpA/MotB domain protein [Bacillus cereus AH603]
gi|229166569|ref|ZP_04294321.1| OmpA/MotB domain protein [Bacillus cereus AH621]
gi|228616823|gb|EEK73896.1| OmpA/MotB domain protein [Bacillus cereus AH621]
gi|228719869|gb|EEL71459.1| OmpA/MotB domain protein [Bacillus cereus AH603]
Length = 225
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 62/150 (41%), Gaps = 9/150 (6%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIV---VSRIGDMITCYIPVH-VSFVSEVFLEKKFLPML 96
+D+ + + + + G+ V R ++ I + + + ++ + ++
Sbjct: 75 AVSKKRMDELYKKLKAYVDNNGVSQVNVYREDTGVSIVIVDNLIFDTGDANVKPEAKEVI 134
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFI 152
+ P+ I ++ HTDS N +S RA + +LI+ ++ +
Sbjct: 135 SQLVGFFQSVPN-PIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRL 193
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G+A P+ +ND+ + N+R+ I I
Sbjct: 194 AAVGYADTKPVASNDSPQNWEKNRRVVIYI 223
>gi|163754618|ref|ZP_02161740.1| phosphoglycerate kinase [Kordia algicida OT-1]
gi|161325559|gb|EDP96886.1| phosphoglycerate kinase [Kordia algicida OT-1]
Length = 457
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 71/193 (36%), Gaps = 19/193 (9%)
Query: 9 MFIMTTISGCGLASREKKKVFLH----KSNDTDIVNKRFGS-------SLDKAEDEFQMQ 57
+ ++GC A + ++ + + D E
Sbjct: 268 VAGTAAMNGCPDADGDGITDAKDNCPNEAGPSANKGCPWTDKDGDGVLDKDDRCPEVAGV 327
Query: 58 LQDTGIVVSRIGDMITCY-----IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
++ G I + +++ +L I ++ FP+
Sbjct: 328 AENDGCPPIPRMTEIEITELDNLARTVYFNSGKDSFKQETYEILNKIVELIKGFPAEEFT 387
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTDS+G+ N +S++RA+ +KSYL + + + G+ PI +N T+ GR
Sbjct: 388 IGGHTDSVGSDSLNQKLSEKRANAVKSYLESKL---SNKFTAIGYGENEPIASNRTRKGR 444
Query: 173 QNNQRIEIQIFPR 185
N+R+EI++
Sbjct: 445 AQNRRVEIKLVKN 457
>gi|85713385|ref|ZP_01044392.1| Peptidoglycan-associated lipoprotein [Idiomarina baltica OS145]
gi|85692791|gb|EAQ30782.1| Peptidoglycan-associated lipoprotein [Idiomarina baltica OS145]
Length = 180
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 65/182 (35%), Gaps = 9/182 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASR-EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
++K L +++ + T ++ C S + ++ T + G + A+ +
Sbjct: 6 LLKALAIAVPMAT-LAACSSTSTTDSGMGSGQETGQTTESGSQSGVQVGAADRAKTPE-- 62
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
V + ++ ++ +L A L K P+ I I+ H D
Sbjct: 63 ----EVREEQMEALRKEHIIYFAFDRSSVQSEYAELLAAHADYLVKNPNVTIVIEGHADE 118
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N+ + + RA ++ + + IS + + P+ + N+R
Sbjct: 119 RGTPEYNIALGERRAKAVED-YLVNLGVQDSQISTVSYGEEKPLVNASNERAYAKNRRAV 177
Query: 180 IQ 181
+
Sbjct: 178 LV 179
>gi|332525185|ref|ZP_08401360.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
JA2]
gi|332108469|gb|EGJ09693.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
JA2]
Length = 211
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 75/202 (37%), Gaps = 30/202 (14%)
Query: 8 SMFIMTTISGCGLASREKKKVF-----------LHKSNDTDIVNKR-------------- 42
+T ++GC K +
Sbjct: 8 VALAVTVLAGCETMDERSKGTATGAAIGALGGAVISKATGGKAGTGAVIGGVVGAVGGNL 67
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFV-SEVFLEKKFLPMLQLIA 100
+ +++ + TGI V+R D + +P +SF L+ P+L A
Sbjct: 68 WSKRMEEKRRAMEQATAGTGIDVARTPDNELKVNVPSDLSFAVGRADLQPSLRPVLDQFA 127
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L++ + + I HTDS G+ N +S RA ++ YL RGV + R + + G +
Sbjct: 128 KGLDQ--TMHVRIVGHTDSTGSDAINDPLSLARARTVRDYLEDRGVPAAR-LEIAGRGSR 184
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
P+ N + GR N+R+EI +
Sbjct: 185 EPVADNGSDAGRAKNRRVEIFL 206
>gi|163796931|ref|ZP_02190887.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [alpha proteobacterium BAL199]
gi|159177678|gb|EDP62229.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [alpha proteobacterium BAL199]
Length = 165
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 63/183 (34%), Gaps = 20/183 (10%)
Query: 1 MIKELGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M++ LS+F ++ C A S T G + ED
Sbjct: 1 MMRMKFLSVFAAVAMLAACETAPDSTANTGAGGSTTTATAPAPKGPAPGSREDF------ 54
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
V +GD + + + L+ A L K+P + ++ H D
Sbjct: 55 -----VVNVGDRV-------FFALDSSEVAANGRTTLEKQAFWLRKYPQATVTVEGHADE 102
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + + RA + YL+ GV +R I+ + + P + N+R
Sbjct: 103 RGTREYNLALGERRAAAARDYLVSLGVDPSR-IATISYGKERPDVLGSNEEAWAKNRRAV 161
Query: 180 IQI 182
I
Sbjct: 162 TVI 164
>gi|84501356|ref|ZP_00999561.1| hypothetical protein OB2597_13363 [Oceanicola batsensis HTCC2597]
gi|84390647|gb|EAQ03135.1| hypothetical protein OB2597_13363 [Oceanicola batsensis HTCC2597]
Length = 350
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I L+ P+L I I+++ P IA+ HTDSIG+ +N +S
Sbjct: 238 EILSRTGNIYFRPGSSRLDDASAPLLDSIYDIISRCPGLRIAVAGHTDSIGSAASNQSLS 297
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ RA + YL +G+ R I+V G+ P+ N T GR N+RIE +
Sbjct: 298 ERRASSVVDYLAAKGLGQGRMIAV-GYGEARPVADNGTDAGRSRNRRIEFSV 348
>gi|253698707|ref|YP_003019896.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251773557|gb|ACT16138.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 333
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ ++ ++ L+ +A L +FP+ I+ HTDS+G N+ +SQ RAD +
Sbjct: 226 NVQFDTNKSDIKPQYHDELKALADFLKEFPNASGTIEGHTDSVGDKAANMKLSQRRADSV 285
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ YL+ R + + GF P N T G+Q N+RIE
Sbjct: 286 RKYLVDRFGVAPERVKAVGFGPTKPAADNKTAAGKQKNRRIE 327
>gi|189502647|ref|YP_001958364.1| hypothetical protein Aasi_1325 [Candidatus Amoebophilus asiaticus
5a2]
gi|189498088|gb|ACE06635.1| hypothetical protein Aasi_1325 [Candidatus Amoebophilus asiaticus
5a2]
Length = 656
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + +V+ I T + E L KK L + L P I ++ HT
Sbjct: 527 ISEETVVLQPIEINQTKILKNVYFKYDEYSLNKKSYIELDRLVAFLKTNPDITIELEGHT 586
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D IG+ + N +S +RA I YL+ + +N ++ +G+ PI ND++ +Q N+R
Sbjct: 587 DHIGSDEYNQQLSTKRAKAIYEYLL-QAGIANDRVNYKGYGKTRPIAPNDSQENQQLNRR 645
Query: 178 IEIQIF 183
+ +I
Sbjct: 646 VAFRIT 651
>gi|146282939|ref|YP_001173092.1| ompA family protein [Pseudomonas stutzeri A1501]
gi|145571144|gb|ABP80250.1| ompA family protein [Pseudomonas stutzeri A1501]
Length = 263
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 1/116 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
S + + + L L + L P + I+ ++DS G +
Sbjct: 137 SETDRGLVMTLGDVLFHPDSAELGNSANRTLLKLVHFLQLNPQRKVRIEGYSDSRGDPQA 196
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL +S+ RA + LI + VRG+ ++PI N + GR N+R+EI
Sbjct: 197 NLELSRARAQTVADLLISL-GIEAERVEVRGYGERFPIAENASARGRAQNRRVEIL 251
>gi|323343250|ref|ZP_08083477.1| OmpA family protein [Prevotella oralis ATCC 33269]
gi|323095069|gb|EFZ37643.1| OmpA family protein [Prevotella oralis ATCC 33269]
Length = 287
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + ++ + ++ + + + L IA I+ + + I+ +TD++
Sbjct: 146 VDVQVLKGVVYISLADNMLYKSGSYEINDRAQTTLSKIAKIIMDYKDYDVLIEGNTDNVP 205
Query: 122 TLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NN +S RA + YL + ++ G PI +N T+VGRQ N+R
Sbjct: 206 ISRENIRNNWDLSCLRASSVVQYLQNHYGVDPKRLTAGGRGEYNPIASNGTEVGRQRNRR 265
Query: 178 IEIQIFPR 185
+I I P+
Sbjct: 266 TQIIITPK 273
>gi|294084383|ref|YP_003551141.1| flagellar MotB protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663956|gb|ADE39057.1| flagellar MotB protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 384
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 7/150 (4%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQ 97
N + + D+ + + ++ + V R D + + +F L ++Q
Sbjct: 234 QNAQAAIAEDELKVALRQEIGQGLVTVEREEDRVLITVGSGGAFASGSAELTDSAREIMQ 293
Query: 98 LIATILNKFPSTVIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
IA ++ S+ I + HTD++ ++N ++ RA + L G +
Sbjct: 294 QIAE-VSAGGSSSINVSGHTDNVPLIFGSQFRDNWDLAAARASSVVQALEDSGQVPGNRM 352
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
F P+++NDT GR N+RIEI+I
Sbjct: 353 QAVSFGESMPLESNDTAEGRALNRRIEIEI 382
>gi|212636367|ref|YP_002312892.1| flagellar motor protein MotB [Shewanella piezotolerans WP3]
gi|212557851|gb|ACJ30305.1| MotB protein [Shewanella piezotolerans WP3]
Length = 322
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 75/188 (39%), Gaps = 18/188 (9%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKR-----------FGSSLDKAEDEFQMQLQDTGIVVSR 67
++ ++++ + T + K E ++ D I +
Sbjct: 129 SSSTAQEQEDAQALAKSTSESKSEASKAEAAAQEEINQQVKKMAQELNKEIVDGAIEIES 188
Query: 68 IGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT---- 122
+G I I +F S FL+ +F P+++ + +L P + + HTD
Sbjct: 189 LGQQIIIRIREKGAFASGSGFLQPRFKPIVRRVGELLKDVPGI-VTVSGHTDDWNISNEL 247
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S +RA + +I+ + + V G A P+ N+++ R N+R+EI I
Sbjct: 248 YSSNWDLSSKRAVAVAHEMIRVKGFDQQRLKVVGMASSAPLVENNSQANRARNRRVEIAI 307
Query: 183 FPRGNIKK 190
+G K+
Sbjct: 308 -EQGKAKE 314
>gi|182678181|ref|YP_001832327.1| OmpA/MotB domain-containing protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182634064|gb|ACB94838.1| OmpA/MotB domain protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 459
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 1/156 (0%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+ + G D + + + + + +
Sbjct: 304 ERAVAAIRTNLADQLPAGYQTDTSAITVHPEDKAVDSKSCQAELDGLLGKATILFETNGA 363
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ K +L I T + P I I HTDS G NL +S+ RA + YL+
Sbjct: 364 TISKSSEGLLDRIVTTIGHCPEATIEISGHTDSTGNEPFNLALSERRAKAVFDYLVAA-G 422
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S G+ P+ +NDT+ GR N+RIE +
Sbjct: 423 IPADKLSATGYGSSRPVASNDTEEGRAKNRRIEFTV 458
>gi|163802616|ref|ZP_02196508.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
AND4]
gi|159173699|gb|EDP58518.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
AND4]
Length = 315
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + LN++P + + +TD+ G N +S++RA
Sbjct: 200 TMGTGSFALNSTTLKPESASKLDDLVAFLNEYPQATVGVIGYTDTSGPAAYNQKVSEKRA 259
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + L+++G+ ++R I RG PI +N+T+ GR+ N+R+E+ +
Sbjct: 260 ESVANALVEKGIDASR-IQARGEGENNPIASNETREGREQNRRVEVVV 306
>gi|331648547|ref|ZP_08349635.1| putative OmpA-family membrane protein [Escherichia coli M605]
gi|330908848|gb|EGH37362.1| putative outer membrane lipoprotein [Escherichia coli AA86]
gi|331042294|gb|EGI14436.1| putative OmpA-family membrane protein [Escherichia coli M605]
Length = 550
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ + T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLPVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 535 VEISLVPRSD 544
>gi|293604168|ref|ZP_06686576.1| outer membrane protein A [Achromobacter piechaudii ATCC 43553]
gi|292817393|gb|EFF76466.1| outer membrane protein A [Achromobacter piechaudii ATCC 43553]
Length = 193
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + +L +A I HTDSIGT N +S+ RA +
Sbjct: 85 DTFFDFDKSTLKPEGRQLLDQVAQQARGIELETIIAVGHTDSIGTEAYNQKLSERRAASV 144
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + I G PI +N TK GR N+R+EI+I
Sbjct: 145 KTYLVSK-GIDPNRIYTEGKGELNPIASNKTKEGRAQNRRVEIEIV 189
>gi|166714357|gb|ABY87945.1| outer membrane protein [Acinetobacter sp. bm-8]
Length = 355
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 55/100 (55%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++ ++ ++ P + +A LN++P+ I+ HTD+ G K N +S RA+ +K
Sbjct: 236 VFFDTNKSNIKDQYKPEIAKVAEKLNEYPNATARIEGHTDNTGPRKLNERLSLARANSVK 295
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S L+ + ++ +GFA+ PI N+TK GR N+R+
Sbjct: 296 SALVSEYNIDSSRLAAQGFAWDQPIADNNTKEGRAMNRRV 335
>gi|83719210|ref|YP_441918.1| OmpA family outer membrane protein [Burkholderia thailandensis
E264]
gi|167580762|ref|ZP_02373636.1| outer membrane protein, OmpA family [Burkholderia thailandensis
TXDOH]
gi|167618865|ref|ZP_02387496.1| outer membrane protein, OmpA family [Burkholderia thailandensis
Bt4]
gi|257138089|ref|ZP_05586351.1| OmpA family outer membrane protein [Burkholderia thailandensis
E264]
gi|83653035|gb|ABC37098.1| outer membrane protein, OmpA family [Burkholderia thailandensis
E264]
Length = 170
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 63/184 (34%), Gaps = 21/184 (11%)
Query: 1 MIKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K+L L+ M ++ ++ C + + + T +
Sbjct: 2 MSKKLRLAFAMLMIGALAACKSGVKLDEHANQGGAVSTQPNPENVAQ------------- 48
Query: 59 QDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + D ++ ++ P+LQ A L P I IQ +T
Sbjct: 49 ----VTVDPLNDPNSPLAKRSVYFDFDSYSVQDQYQPLLQQHAQYLKSHPQRHILIQGNT 104
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ + + + + P+ + N+R
Sbjct: 105 DERGTSEYNLALGQKRAEAVRR-ALSLLGVGDSQMEAVSLGKEKPVALGHDEASWAQNRR 163
Query: 178 IEIQ 181
++
Sbjct: 164 ADLV 167
>gi|284039059|ref|YP_003388989.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283818352|gb|ADB40190.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 427
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 13/182 (7%)
Query: 14 TISGCGLASREKKKVFLHKSNDT----DIVNKRFGSSLDKAEDEFQMQ--LQDTGIVVSR 67
ISG + E S +I + + A+ F L + V+R
Sbjct: 245 LISGAEASGDEPADSLQSGSLTGKYRIEIDRRGVYAVTASAKGYFSQSDTLVTNRVDVAR 304
Query: 68 IGDMI------TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+++ + VS+ L+ + P L + T++ P+ I ++ HTD++G
Sbjct: 305 DFNLVPIEAGAKITLKNIYFNVSKYDLKPESYPELDRLVTVMRSNPTMQIRLEGHTDTVG 364
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N+ +S+ R + +K YL+ +G+S++R +V G+ PI+TN + R N+R+E+
Sbjct: 365 EFDANVELSRNRVNEVKRYLVDKGISASRIETV-GYGPSRPINTNKSLKERPENRRVEMV 423
Query: 182 IF 183
I
Sbjct: 424 IV 425
>gi|209883793|ref|YP_002287650.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
gi|209871989|gb|ACI91785.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
Length = 464
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 72/191 (37%), Gaps = 15/191 (7%)
Query: 6 GLSMFIMTTISGCG--LASR---EKKKVFLHKSNDTDIVNKRFGSSLD-------KAEDE 53
G M + G + + + L +++ G L K + E
Sbjct: 274 GFMAAAMLALKGLSRLSTGTLTIQDRNIKLTGDALYPAASEQIGEELASKLPQGWKQQAE 333
Query: 54 FQMQLQDTGI--VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
++ + + + + ++ + +L + ++ + ++ I
Sbjct: 334 LSVKPIAAPVNATICQQLLGGLLGKGTIRFETGKAVIDPDSVGLLDRLVEVVLRCSTSQI 393
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I HTDS G ++NL +S RA + YLI + + I+ GF PI NDT+ G
Sbjct: 394 EITGHTDSNGDAESNLALSNRRAQSVADYLI-KAGVPSERITAIGFGSGRPIAPNDTEEG 452
Query: 172 RQNNQRIEIQI 182
+ N+RIE +
Sbjct: 453 KAQNRRIEFLV 463
>gi|78223750|ref|YP_385497.1| OmpA/MotB [Geobacter metallireducens GS-15]
gi|78195005|gb|ABB32772.1| OmpA/MotB [Geobacter metallireducens GS-15]
Length = 292
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 69/170 (40%), Gaps = 10/170 (5%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV- 83
K ++ + + V + + D D + ++ + +S + +T + + F
Sbjct: 120 KAEIAETRKAREEKVREVSKTYEDLL-DRMKGEIAQGQVTISELKGKLTVNMVDAILFDS 178
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG-------TLKNNLLISQERADV 136
+ +++ + +L + IL +I I+ HTD++ N +S RA
Sbjct: 179 GKAEVKQGGMEVLAKVVDILKGVQDKMIRIEGHTDNVQIVGNLTKRFPTNWELSAARAIN 238
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ YL + + P+ +NDT+ GR N+RIEI + PR
Sbjct: 239 VARYLQGQ-GIDPTVLVAVANGEYRPVASNDTEEGRAKNRRIEIVLVPRD 287
>gi|49082800|gb|AAT50800.1| PA2900 [synthetic construct]
Length = 270
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
S+ + ++ + + + + + L+ + L
Sbjct: 125 SVQEQGQRLSEEIAS--LSTEETERGLVLTLGDVLFDFNRAELKPAANRTALKLVQFLQL 182
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P VI I+ +TDS+G + NL +S+ERA + L GV R V G+ +P+
Sbjct: 183 NPRRVIRIEGYTDSVGDRQANLDLSRERAQAVADVLADLGVDPARM-QVVGYGEAFPVTD 241
Query: 166 NDTKVGRQNNQRIEIQ 181
N + GR N+R+EI
Sbjct: 242 NASNRGRAQNRRVEIV 257
>gi|295706900|ref|YP_003599975.1| putative flagellar motor channel protein [Bacillus megaterium DSM
319]
gi|294804559|gb|ADF41625.1| putative flagellar motor channel protein [Bacillus megaterium DSM
319]
Length = 203
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 64/191 (33%), Gaps = 14/191 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTD--------IVNKRFGSSLDKAEDEFQM 56
+ L + + +K + ++ +++ + L K + +
Sbjct: 8 VTLILVFFILLFSMSSVDNQKFQTVVNSLTSGGSLASVEKSQQSQKLDNILAKVQGYLKE 67
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
I R + + V F + + KK P L + + + P+ I ++
Sbjct: 68 NKLQHVITAKRDERGVVLILQEQVLFETGQADILKKGTPFLDELGRLFSTIPN-DIKVEG 126
Query: 116 HTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
HTD+ N +S RA + YL S G+ P+ N +
Sbjct: 127 HTDNRPIHTYRYPSNWELSAARASGVIRYLTNHFSLSANRFEALGYGDTKPLVPNTSNDN 186
Query: 172 RQNNQRIEIQI 182
Q N+R+EI I
Sbjct: 187 LQKNRRVEIII 197
>gi|153949846|ref|YP_001401475.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP
31758]
gi|152961341|gb|ABS48802.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
Length = 578
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L ML + P +I + HTD G + N ++S +RA+ ++
Sbjct: 446 SLFDVGKFTLNAGSTKMLVDALMNIRAKPGWLIVVAGHTDITGDAQANHILSLKRAEALR 505
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ S +V+G+ PI NDT GR N+R+EI + P+ +
Sbjct: 506 DWMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISLVPQAD 554
>gi|312889185|ref|ZP_07748742.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311298347|gb|EFQ75459.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 286
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 55/132 (41%), Gaps = 5/132 (3%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V + ++ + ++ + + +K L IA I+ + + I+ +T
Sbjct: 139 ESKDVNVKVLKGVVYISLSDNMLYKSGSYEISEKAGATLAKIAKIITDYKGYDVLIEGNT 198
Query: 118 D----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
D S ++NN +S RA + L + ++ G P+ N T+ G+
Sbjct: 199 DNLPISKPNIRNNWDLSALRASSVVQSLQNNYGVEPKRLTAGGRGEYNPVADNSTESGKA 258
Query: 174 NNQRIEIQIFPR 185
N+R +I I P+
Sbjct: 259 QNRRTQIIITPK 270
>gi|77920564|ref|YP_358379.1| peptidoglycan-associated lipoprotein [Pelobacter carbinolicus DSM
2380]
gi|77546647|gb|ABA90209.1| peptidoglycan-associated lipoprotein [Pelobacter carbinolicus DSM
2380]
Length = 190
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 59/183 (32%), Gaps = 2/183 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++ L + + GC V + + + +
Sbjct: 10 MQVLLMMILTAMLAVGCAKKP-APVPVTTDDQAAAQQAVQGVEEMGAGETGIGESMIGEE 68
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ S + L + +L A L P + I+ + D G
Sbjct: 69 SMDDSMSMPQTVASLERIYFNFDRYDLSPEAQAILINNAEYLKANPDQKVRIEGYCDERG 128
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + NL + + RA + YL GV+ +R +SV + + P+D + N+R E +
Sbjct: 129 SDEYNLALGERRALAAQKYLESLGVAGDR-LSVISYGEEMPLDPAQNEDAYAMNRRAEFK 187
Query: 182 IFP 184
P
Sbjct: 188 SMP 190
>gi|194014658|ref|ZP_03053275.1| chemotaxis protein MotB (Motility protein B) [Bacillus pumilus ATCC
7061]
gi|194013684|gb|EDW23249.1| chemotaxis protein MotB (Motility protein B) [Bacillus pumilus ATCC
7061]
Length = 254
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 5/142 (3%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
+ + + + + + I + F + + +P+ + I+ +L
Sbjct: 107 KQVDSFIANKKLGAKLETKLTDEGLLITIEDSIFFDSGRAIIRPQDVPLAKEISKLLVIN 166
Query: 107 PSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I I HTD++ ++N +S RA S L++ + S +GF P
Sbjct: 167 PARDIVISGHTDNVPIRNSEFESNWYLSAIRAVNFLSILLENSNLNQENFSTKGFGEFKP 226
Query: 163 IDTNDTKVGRQNNQRIEIQIFP 184
I +NDT GR N+R+E+ I P
Sbjct: 227 IASNDTAEGRSKNRRVEVLILP 248
>gi|325286304|ref|YP_004262094.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324321758|gb|ADY29223.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 372
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 65 VSRIGDMI--TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V G + I + + K+ L+ + L + P + I H+D+ G
Sbjct: 236 VEDEGINLDEIYVIKDLLFTSDSYVINKEAKGQLRELVRHLKRNPRLNVTIYGHSDNEGD 295
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K N L+S RA + +L+ G++ +R I +G+ + P+ TN+++ GR N+R+E +
Sbjct: 296 AKYNKLLSLNRAKSVGEFLLDNGLTFDR-IKWQGYGDEIPLATNNSETGRLKNRRVEFVV 354
>gi|237718629|ref|ZP_04549110.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229452089|gb|EEO57880.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 290
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + ++ + ++ + + K +L IA I+ + + ++ +TD+
Sbjct: 136 LDIKVLKGVVYISLADNMLYKSGSYEISNKAEAVLSKIAKIIQDYKDYDVLVEGNTDTDP 195
Query: 122 TLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NN +S RA + L + + ++ G P+ NDT G+ N+R
Sbjct: 196 ISRTNIRNNWDLSALRASSVVQALQNIYGINPKRLTAAGRGEFNPVAGNDTAEGKARNRR 255
Query: 178 IEIQIFPR 185
EI I P+
Sbjct: 256 TEIIITPK 263
>gi|107102449|ref|ZP_01366367.1| hypothetical protein PaerPA_01003511 [Pseudomonas aeruginosa PACS2]
Length = 269
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
S+ + ++ + + + + + L+ + L
Sbjct: 125 SVQEQGQRLSEEIAS--LSTEETERGLVLTLGDVLFDFNRAELKPAANRTALKLVQFLQL 182
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P VI I+ +TDS+G + NL +S+ERA + L GV R V G+ +P+
Sbjct: 183 NPRRVIRIEGYTDSVGDRQANLDLSRERAQAVADVLADLGVDPARM-QVVGYGEAFPVTD 241
Query: 166 NDTKVGRQNNQRIEIQ 181
N + GR N+R+EI
Sbjct: 242 NASNRGRAQNRRVEIV 257
>gi|170761206|ref|YP_001787972.1| chemotaxis motB protein [Clostridium botulinum A3 str. Loch Maree]
gi|169408195|gb|ACA56606.1| chemotaxis protein MotB [Clostridium botulinum A3 str. Loch Maree]
Length = 247
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 66/181 (36%), Gaps = 10/181 (5%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDM 71
SG + K + +T + + GS E + + V G
Sbjct: 63 SGDSIVDYNMKNGDIPLVGETTKLGRETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRG 122
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNN 126
I + +V F ++ + ++ I ++ P+ + I+ HTD++ +N
Sbjct: 123 IIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPN-EVIIEGHTDNVPIKNEVYGSN 181
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S RA + Y ++ + + G+ PI N++ + N+R+ I I +
Sbjct: 182 WELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANKAKNRRVNIVIVSKE 241
Query: 187 N 187
Sbjct: 242 K 242
>gi|95930659|ref|ZP_01313393.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
gi|95133311|gb|EAT14976.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
Length = 303
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ ++ + + +++ I ++++ D +T + + F L + +++ +
Sbjct: 148 AKMANTYNSLVANLEQEIERGEITINKLKDKLTVNLVEKILFPSGSADLTPAGIKVIRQV 207
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLK-------NNLLISQERADVIKSYLIQRGVSSNRFI 152
IL + I ++ HTD++G K +N +S RA + L + +
Sbjct: 208 GDILKEVDDKDIRVEGHTDNLGISKALQAKFPSNWELSAARAANVVRVLQREVGIPGEKL 267
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ + +P+ +NDT GR N+RI+I + P
Sbjct: 268 EIGAYGPFHPVSSNDTPEGRAQNRRIQIVLVP 299
>gi|254482387|ref|ZP_05095627.1| type I secretion outer membrane protein, TolC family, putative
[marine gamma proteobacterium HTCC2148]
gi|214037392|gb|EEB78059.1| type I secretion outer membrane protein, TolC family, putative
[marine gamma proteobacterium HTCC2148]
Length = 631
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
GDM++ + V F + + + + A +L + P ++ HTDS G N
Sbjct: 514 DGDMVSLEVDVQFDF-NSSVISSAYDSEIARSAGVLRENPGVRATVEGHTDSSGENDYNQ 572
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S+ RA+ ++ LI S + G YPI NDT R N+R+E+
Sbjct: 573 WLSERRANAVRDMLINEHGISPEQLVAIGRGEDYPIAGNDTAEDRARNRRVELV 626
>gi|172062678|ref|YP_001810329.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171995195|gb|ACB66113.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 587
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 43/106 (40%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L + ++ + + + D G NL +S +RA ++
Sbjct: 469 SLFDSGKATLRTGTTRAMVDALELIKAHSGKRVLVAGYADDQGRPDRNLKLSIDRASAVR 528
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+L++ +++G+ P+ N T GR N+R+EI + P
Sbjct: 529 DWLVEASGIPPTRFAIQGYGDTRPVADNATPEGRAKNRRVEITLVP 574
>gi|170756344|ref|YP_001782268.1| chemotaxis motB protein [Clostridium botulinum B1 str. Okra]
gi|169121556|gb|ACA45392.1| chemotaxis protein MotB [Clostridium botulinum B1 str. Okra]
Length = 247
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 66/181 (36%), Gaps = 10/181 (5%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDM 71
SG + K + +T + + GS E + + V G
Sbjct: 63 SGDSIVDYNMKNGDIPLVGETTKLGRETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRG 122
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNN 126
I + +V F ++ + ++ I ++ P+ + I+ HTD++ +N
Sbjct: 123 IIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPN-EVIIEGHTDNVPIKNEVYGSN 181
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S RA + Y ++ + + G+ PI N++ + N+R+ I I +
Sbjct: 182 WELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANKAKNRRVNIVIVSKE 241
Query: 187 N 187
Sbjct: 242 K 242
>gi|114045658|ref|YP_736208.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113887100|gb|ABI41151.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 487
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 4/125 (3%)
Query: 62 GIVVSRIGDMIT----CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
GI + + D I + + L + P+++++A+ L P + HT
Sbjct: 358 GINLEALTDQIEAKGHVALEGLLFEYDSDKLLPEAQPVVEVLASYLKANPKRAFYVVGHT 417
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G N +SQ RA I L + + G P+ +N + G+Q N+R
Sbjct: 418 DDKGNQAYNQGLSQRRAVAIVKLLTSSHGIQTQQLEAVGIGEHAPVASNSDEAGQQQNRR 477
Query: 178 IEIQI 182
+E+ +
Sbjct: 478 VELVL 482
>gi|332519379|ref|ZP_08395846.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045227|gb|EGI81420.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 476
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
SGC + V + V + + + ++ D + Y
Sbjct: 319 SGCPWPDTDGDGVVDKDDKCPNEVGTVANNGCPEVVAQPTQEVI----------DQLNSY 368
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + +++ +L+ I IL ++P + I+ HTDS+G+ +N +S+ RA+
Sbjct: 369 ARTILFDTGKSSFKEQTKEVLKNITAILKEYPDSNFTIEGHTDSVGSKSSNQKLSERRAN 428
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ YLI G+S++R +S GF YP+D+N T+ GR+NN+R EI++
Sbjct: 429 AVRDYLIANGISASR-LSAYGFGEDYPVDSNATRNGRKNNRRTEIKL 474
>gi|325290746|ref|YP_004266927.1| OmpA/MotB domain protein [Syntrophobotulus glycolicus DSM 8271]
gi|324966147|gb|ADY56926.1| OmpA/MotB domain protein [Syntrophobotulus glycolicus DSM 8271]
Length = 273
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 73/173 (42%), Gaps = 11/173 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS----RIGDMITCY 75
AS + + + N++ V+ + LD + + + GI +
Sbjct: 86 SASTDPESSGQLQKNNSGNVDMETMTILD-IKAKLDQFSKANGIESKLISSTEERGLVVS 144
Query: 76 IPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLIS 130
I + F + L +LQ I+++L + I ++ HT ++ ++N +S
Sbjct: 145 IQDTLLFQPGSAEISPNALDILQKISSVLAASQNY-IKVEGHTCTLPIHTSQYRSNWELS 203
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + L + G +++ +S G+ PI +NDT GR N+R+++ I
Sbjct: 204 VIRATNVVHILAESGQINSKRLSATGYGEFRPIASNDTDEGRIKNRRVDLIIL 256
>gi|149193985|ref|ZP_01871083.1| OmpA/MotB [Caminibacter mediatlanticus TB-2]
gi|149135938|gb|EDM24416.1| OmpA/MotB [Caminibacter mediatlanticus TB-2]
Length = 196
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 76/197 (38%), Gaps = 15/197 (7%)
Query: 2 IKE--LGLSMFIMTTISGCGL------ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
+K+ LG+ + + +GC A ++ + + +++
Sbjct: 1 MKKTGLGIGLAALLFFAGCSKQPNLENAQMQENNATVQEQMTNQQQVVTQPETVNTENAN 60
Query: 54 FQMQ-LQDTGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFP- 107
Q + L T + VS++ + V + + P ++ +A ++ K P
Sbjct: 61 VQEENLTATTVTVSKMQNNQEFAKKLASIVVYFDFDKYNIRPDQWPKVEKLAKLIKKNPS 120
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ + I+ + D GT + N + +RA+ +K+ LI + + +++ + P+ T
Sbjct: 121 NYTVRIEGNCDEWGTEEYNYALGLKRANSVKNALI-KLGVDPKKLTIISYGELNPVCTAH 179
Query: 168 TKVGRQNNQRIEIQIFP 184
K + N+R P
Sbjct: 180 AKWCWRLNRRDNFTYLP 196
>gi|160872189|ref|ZP_02062321.1| OmpA/MotB domain protein [Rickettsiella grylli]
gi|159120988|gb|EDP46326.1| OmpA/MotB domain protein [Rickettsiella grylli]
Length = 175
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 9/174 (5%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ ++ ++ C + S TD + + ++D G
Sbjct: 1 MVAMLLSLGACATPDNNEFDEANTVSTKTDSLLQTDS--------ALTQGIEDDGFYHDE 52
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + ++ F+ ++ P LQ+ A L P T I I +TD G+ + N+
Sbjct: 53 NRHPLHVGDQTYHFDFNQSFVREEDKPSLQIQAHYLISHPQTKILIVGNTDERGSREYNI 112
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ Q RA ++ +LI GVS + ++V + + P+ ++ N+R ++Q
Sbjct: 113 GLGQRRALSVERFLIANGVSKKQILTVS-YGAEKPVAFGHSEADYAKNRRADLQ 165
>gi|254253147|ref|ZP_04946465.1| Outer membrane protein [Burkholderia dolosa AUO158]
gi|124895756|gb|EAY69636.1| Outer membrane protein [Burkholderia dolosa AUO158]
Length = 182
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 66/184 (35%), Gaps = 21/184 (11%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+ L L++ ++ ++ C + K + + ++D
Sbjct: 14 MMSNKVRLALAVMMIGALAACKSGVKLDDKANAGAVSTQPSADNVAQVNVDPL------- 66
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
++ ++ P+LQ A L P + IQ +T
Sbjct: 67 ----------NDPNSPLAKRSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNT 116
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ L GV+ ++ +V + P+ T + N+R
Sbjct: 117 DERGTSEYNLALGQKRAEAVRRALALLGVADSQMEAVS-LGKEKPLATGHDEASWAQNRR 175
Query: 178 IEIQ 181
++
Sbjct: 176 ADLV 179
>gi|146305280|ref|YP_001185745.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145573481|gb|ABP83013.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 317
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 56/135 (41%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
L++ E +M L + G + + + + + P L IA +L
Sbjct: 179 LERKAMEQRMVLVEAGELQRGLDAQGRVALYGLYFDTDKADMRADSQPQLAEIAKLLQAS 238
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ + HTD+ G L N +SQ RA I L+ + + + +S G P+ +N
Sbjct: 239 AQLQVLVVGHTDAQGALDYNRDLSQRRAQSIVEALVSQHGIARQRLSAVGVGMAAPVASN 298
Query: 167 DTKVGRQNNQRIEIQ 181
+ GR N+R+E+
Sbjct: 299 RDEAGRALNRRVELV 313
>gi|83718191|ref|YP_438455.1| hypothetical protein BTH_II0253 [Burkholderia thailandensis E264]
gi|167614920|ref|ZP_02383555.1| hypothetical protein BthaB_01465 [Burkholderia thailandensis Bt4]
gi|257141504|ref|ZP_05589766.1| hypothetical protein BthaA_20174 [Burkholderia thailandensis E264]
gi|83652016|gb|ABC36080.1| ompA family protein [Burkholderia thailandensis E264]
Length = 437
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V D + F + +++P+L IA LN+ P +
Sbjct: 290 LEPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRIADALNQVPG-SVR 348
Query: 113 IQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ +TD +N +S+ERA+ + LI + I+ G P+ ND+
Sbjct: 349 VSGYTDDTPVHTARFASNWDLSRERAEAV-RGLIAARLDRPDRITAEGRGTLDPVAPNDS 407
Query: 169 KVGRQNNQRIEIQIF 183
R N+R+EI +
Sbjct: 408 PANRARNRRVEITLM 422
>gi|285019182|ref|YP_003376893.1| pal family outer membrane lipoprotein [Xanthomonas albilineans GPE
PC73]
gi|283474400|emb|CBA16901.1| probable pal family outer membrane lipoprotein [Xanthomonas
albilineans]
Length = 172
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 74/188 (39%), Gaps = 19/188 (10%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L +S+ + ++GC +E + + + + S L D
Sbjct: 1 MNKTTRVLLVSLLSVAALAGCSKKVKEHPQTDTTGTTGSTTPSGSSTSGLYGPGDLNTDA 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
V + + ++ +F ++ A L PS+ I +Q +T
Sbjct: 61 ---------------CLRQRVVYFDLDKDTVKPEFQAIMACHAKYLRDRPSSRITLQGNT 105
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ + N+ + + RA+ + S L G S+ + ++V F ++P+ T + N+R
Sbjct: 106 DERGSREYNMGLGERRANSVFSALQANGGSAAQ-LTVVSFGEEHPVCTESNESCWSQNRR 164
Query: 178 IEIQIFPR 185
+EI +
Sbjct: 165 VEIVYTAQ 172
>gi|256830358|ref|YP_003159086.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum
DSM 4028]
gi|256579534|gb|ACU90670.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum
DSM 4028]
Length = 176
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 18/185 (9%)
Query: 2 IKELGLSMFIMTTIS-----GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+++L + + I+ S GC ++ G S + E +
Sbjct: 1 MRKLSMFVLIVLAFSLAMAGGCSKKVS----STPAGTSAASSSPDAGGLSSAQLEAQRLA 56
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+LQ I L + +L A +L + + I+ H
Sbjct: 57 ELQRQAID--------KIGADRIYFAFDRSELSDQSRQVLAEKAELLKTHAALSLLIEGH 108
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
D GT + N+ + + RA YL+ ++ I++ + +YP + N+
Sbjct: 109 CDERGTNEYNMALGERRARAAYEYLVL-MGIASDRITIISYGEEYPAVPGSNEEAWAKNR 167
Query: 177 RIEIQ 181
R E +
Sbjct: 168 RDEFK 172
>gi|77460334|ref|YP_349841.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77384337|gb|ABA75850.1| putative outer membrane protein [Pseudomonas fluorescens Pf0-1]
Length = 270
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
S+ + + Q+ + ++ + + + E L+ ++ I L
Sbjct: 126 SVQQQGKWLEEQIV--ALATTQTDRGLVMTLGDVLFDTGEAELKNSANRVVLKIVQFLQL 183
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P ++ I+ +TDS G + NL +S++RA + ++ + I V G+ +YP+D
Sbjct: 184 NPKRIVRIEGYTDSTGGKQENLKLSRDRAQSVAD-VLTDLGIDEKRIQVEGYGDEYPVDA 242
Query: 166 NDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 243 NASERGRAQNRRVEIV 258
>gi|15598096|ref|NP_251590.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1]
gi|116050903|ref|YP_790274.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218890901|ref|YP_002439767.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|254235886|ref|ZP_04929209.1| hypothetical protein PACG_01830 [Pseudomonas aeruginosa C3719]
gi|254241564|ref|ZP_04934886.1| hypothetical protein PA2G_02265 [Pseudomonas aeruginosa 2192]
gi|296388613|ref|ZP_06878088.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
PAb1]
gi|313108050|ref|ZP_07794215.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
gi|9948992|gb|AAG06288.1|AE004716_6 probable outer membrane protein precursor [Pseudomonas aeruginosa
PAO1]
gi|115586124|gb|ABJ12139.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126167817|gb|EAZ53328.1| hypothetical protein PACG_01830 [Pseudomonas aeruginosa C3719]
gi|126194942|gb|EAZ59005.1| hypothetical protein PA2G_02265 [Pseudomonas aeruginosa 2192]
gi|218771126|emb|CAW26891.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|310880717|gb|EFQ39311.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
Length = 269
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
S+ + ++ + + + + + L+ + L
Sbjct: 125 SVQEQGQRLSEEIAS--LSTEETERGLVLTLGDVLFDFNRAELKPAANRTALKLVQFLQL 182
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P VI I+ +TDS+G + NL +S+ERA + L GV R V G+ +P+
Sbjct: 183 NPRRVIRIEGYTDSVGDRQANLDLSRERAQAVADVLADLGVDPARM-QVVGYGEAFPVTD 241
Query: 166 NDTKVGRQNNQRIEIQ 181
N + GR N+R+EI
Sbjct: 242 NASNRGRAQNRRVEIV 257
>gi|134294843|ref|YP_001118578.1| OmpA domain-containing protein [Burkholderia vietnamiensis G4]
gi|134138000|gb|ABO53743.1| OmpA domain protein [Burkholderia vietnamiensis G4]
Length = 170
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 67/185 (36%), Gaps = 22/185 (11%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+ L L++ +++ ++ C + K + T
Sbjct: 1 MMSNKARLALAVMMISALAACKSGVKLDDKANNAGAVSTQPSADNVAQ------------ 48
Query: 58 LQDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V + D ++ ++ P+LQ A L P + IQ +
Sbjct: 49 -----VNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGN 103
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD GT + NL + Q+RA+ ++ + GV+ ++ +V + P T + N+
Sbjct: 104 TDERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNR 162
Query: 177 RIEIQ 181
R ++
Sbjct: 163 RADLV 167
>gi|281179819|dbj|BAI56149.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 550
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 53/109 (48%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L+ +L + P +I + +TD+ G K+N +S RA+ ++
Sbjct: 436 SLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDATGDEKSNQQLSLRRAEAVR 495
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++++Q +V+G P TNDT GR N+R+EI + PR +
Sbjct: 496 NWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVPRSD 544
>gi|113968495|ref|YP_732288.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113883179|gb|ABI37231.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 487
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 4/125 (3%)
Query: 62 GIVVSRIGDMIT----CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
GI + + D I + + L + P+++++A+ L P + HT
Sbjct: 358 GINLEALTDQIEAKGHVALEGLLFEYDSDKLLPEAQPVVEVLASYLKANPKRAFYVVGHT 417
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G N +SQ RA I L + + G P+ +N + G+Q N+R
Sbjct: 418 DDKGNQAYNQGLSQRRAVAIVKLLTTSHGIPTQQLEAVGIGEHAPVASNSDEAGQQQNRR 477
Query: 178 IEIQI 182
+E+ +
Sbjct: 478 VELVL 482
>gi|221640398|ref|YP_002526660.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
gi|221161179|gb|ACM02159.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
Length = 310
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G ++ R+ + + V LE + P L +A L + P+ + I HTD+ G
Sbjct: 187 GTLIPRLEETGAAVLEELVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDASG 246
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L+ N+ +S+ RA ++ LI R ++ G Y P TN T+ GR N+R+E+
Sbjct: 247 GLEGNVTLSRARAVSVRERLIARHGVDGAQVTADGVGYLAPRATNRTEEGRARNRRVEVM 306
Query: 182 IF 183
+
Sbjct: 307 LL 308
>gi|311106926|ref|YP_003979779.1| OmpA family protein 3 [Achromobacter xylosoxidans A8]
gi|310761615|gb|ADP17064.1| OmpA family protein 3 [Achromobacter xylosoxidans A8]
Length = 199
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 13/179 (7%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGD 70
+G +A K + T + K S + Q+ G+ V + +
Sbjct: 19 TGGSMAQEPPYKAEILDLQATILDLKGLPSDASGGISDLNAQIDGLAARHDGLSVRQDKN 78
Query: 71 MITCYI-PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+T + + + + P L+ IA+++ + +AI+ HTDS G+ N +
Sbjct: 79 AVTVAMLGDVLFDFDKTAIRPAAEPTLRDIASLIKASSAGTVAIEGHTDSKGSASYNKDL 138
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQI 182
S RA + +L GV R ++V+G PI +N D GR N+R+E +
Sbjct: 139 SLRRAQAVAQWLTSHGVDKAR-LTVKGLGDTQPIQSNRLANGADNPQGRAQNRRVEFVL 196
>gi|149370978|ref|ZP_01890573.1| outer membrane protein, OmpA family [unidentified eubacterium
SCB49]
gi|149355764|gb|EDM44322.1| outer membrane protein, OmpA family [unidentified eubacterium
SCB49]
Length = 323
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 62/154 (40%), Gaps = 9/154 (5%)
Query: 41 KRFGSSLDKAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPML 96
+ +D ++ L + G+ V + + + + F S + + +
Sbjct: 160 AAKEAQMDALKNAISAALTSFEGNGLTVEQREGKVYVSMENKLLFESGSWDVNSRGREAV 219
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRF 151
+ +L + I+ HTD++ + +N +S +RA I + L +
Sbjct: 220 VALGKVLGDNKEIAVLIEGHTDNVPYGEKGLIKDNWDLSTKRATAIVAILTENNNIPKEN 279
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ G PI +N+T G+ N+RIE+ + P+
Sbjct: 280 LTAAGRGEYAPIASNNTSEGKAKNRRIEVVLTPK 313
>gi|126463345|ref|YP_001044459.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126105009|gb|ABN77687.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 310
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G ++ R+ + + V LE + P L +A L + P+ + I HTD+ G
Sbjct: 187 GTLIPRLEETGAAVLEELVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDASG 246
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L+ N+ +S+ RA ++ LI R ++ G Y P TN T+ GR N+R+E+
Sbjct: 247 GLEGNVTLSRARAVSVRERLIARHGVDGAQVTADGVGYLAPRATNRTEEGRARNRRVEVM 306
Query: 182 IF 183
+
Sbjct: 307 LL 308
>gi|322509420|gb|ADX04874.1| Outer membrane protein [Acinetobacter baumannii 1656-2]
gi|323519441|gb|ADX93822.1| putative lipoprotein precursor [Acinetobacter baumannii
TCDC-AB0715]
Length = 154
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 63/183 (34%), Gaps = 29/183 (15%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K +++ ++GC + L+
Sbjct: 1 MKLSFIALLC-IALAGCLS--------------------------FGPLKYRQVKMLKKE 33
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G V++ G + + ++ L++ L +A LNK+ + I HTD +G
Sbjct: 34 GFVLTNEGWTLGLP-ERLLFDFNDATLKQSHEAELTRLANQLNKYDLNKLKIVGHTDDVG 92
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N +S+ERA + + + I V G P N T R N+R+ I
Sbjct: 93 NPEYNQKLSEERAQSVANLFLT-HGFKKENIYVIGRGSTQPYVPNTTNENRAINRRVAIV 151
Query: 182 IFP 184
I P
Sbjct: 152 IIP 154
>gi|15596658|ref|NP_250152.1| flagellar motor protein MotD [Pseudomonas aeruginosa PAO1]
gi|107100895|ref|ZP_01364813.1| hypothetical protein PaerPA_01001925 [Pseudomonas aeruginosa PACS2]
gi|116049406|ref|YP_791791.1| flagellar motor protein MotD [Pseudomonas aeruginosa UCBPP-PA14]
gi|254234559|ref|ZP_04927882.1| MotD [Pseudomonas aeruginosa C3719]
gi|254239810|ref|ZP_04933132.1| MotD [Pseudomonas aeruginosa 2192]
gi|313106460|ref|ZP_07792691.1| chemotaxis protein, MotD [Pseudomonas aeruginosa 39016]
gi|9947413|gb|AAG04850.1|AE004575_9 MotD [Pseudomonas aeruginosa PAO1]
gi|3721573|dbj|BAA33552.1| ORF2 [Pseudomonas aeruginosa]
gi|115584627|gb|ABJ10642.1| chemotaxis protein, MotD [Pseudomonas aeruginosa UCBPP-PA14]
gi|126166490|gb|EAZ52001.1| MotD [Pseudomonas aeruginosa C3719]
gi|126193188|gb|EAZ57251.1| MotD [Pseudomonas aeruginosa 2192]
gi|310879193|gb|EFQ37787.1| chemotaxis protein, MotD [Pseudomonas aeruginosa 39016]
Length = 296
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 7/175 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ ++ + +D D D F + + V I + +
Sbjct: 76 TTEPERTSVEEQPSDNAASADSLERIADSVRDAFGDLIASDQLSVRGNELWIEITLNSSL 135
Query: 81 SFVSEVFLEKKFL-PMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERAD 135
F S L +++ +A IL + + I ++ TD N +S RA
Sbjct: 136 LFPSGDALPNDAAFDIVEKVAKILAPYKN-PIHVEGFTDDVPIHSPRYPTNWELSAARAA 194
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
I L+ ++ G+ P+ N + GR N+R+ + I +++
Sbjct: 195 SIVR-LLGNDGVEPSRMAAVGYGEFQPVADNASAEGRAKNRRVVLVISRNLEVRR 248
>gi|327481279|gb|AEA84589.1| ompA family protein [Pseudomonas stutzeri DSM 4166]
Length = 265
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 1/116 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
S + + + L L + L P + I+ ++DS G +
Sbjct: 139 SETDRGLVMTLGDVLFHPDSAELGNSANRTLLKLVHFLQLNPQRKVRIEGYSDSRGDPQA 198
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL +S+ RA + LI + VRG+ ++PI N + GR N+R+EI
Sbjct: 199 NLELSRARAQTVADLLISL-GIEAERVEVRGYGERFPIAENASARGRAQNRRVEIL 253
>gi|313203569|ref|YP_004042226.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312442885|gb|ADQ79241.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 231
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 80/223 (35%), Gaps = 36/223 (16%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKK----------------------------VF 29
M ++ + + + ++GC S K
Sbjct: 1 MKRKNGLVAIILSASIVLAGCSTMSNTTKGGLFGGGAGAAIGAGVGALIGKSTKSAAIGA 60
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM---ITCYIPVHVSFVS-E 85
+ G +DKA + ++ + R + I + F + +
Sbjct: 61 GIGTVVGATTGVIIGKKMDKAAAQ-AAAIEGARVDSIRDANNLKAIKVTFDSGILFQTNK 119
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L L A IL P+ I I HTD+ G+L N +SQERA + ++L +
Sbjct: 120 SALNTASKDALTKFAKILVANPTMDITIMGHTDNQGSLDVNQKLSQERAQSVANFLQTQS 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
V++ +F + G + P+ N T GR N+R+E+ ++ +
Sbjct: 180 VTATQFKEIIGKNFAEPVADNKTAAGRAANRRVEVYMYASEKM 222
>gi|218892666|ref|YP_002441535.1| flagellar motor protein MotD [Pseudomonas aeruginosa LESB58]
gi|218772894|emb|CAW28706.1| MotD [Pseudomonas aeruginosa LESB58]
Length = 296
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 7/175 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ ++ + +D D D F + + V I + +
Sbjct: 76 TTEPERTSVEEQPSDNAASADSLERIADSVRDAFGDLIASDQLSVRGNELWIEITLNSSL 135
Query: 81 SFVSEVFLEKKFL-PMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERAD 135
F S L +++ +A IL + + I ++ TD N +S RA
Sbjct: 136 LFPSGDALPNDAAFDIVEKVAKILAPYKN-PIHVEGFTDDVPIHSPRYPTNWELSAARAA 194
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
I L+ ++ G+ P+ N + GR N+R+ + I +++
Sbjct: 195 SIVR-LLGNDGVEPSRMAAVGYGEFQPVADNASAEGRAKNRRVVLVISRNLEVRR 248
>gi|163745646|ref|ZP_02153006.1| OmpA domain protein [Oceanibulbus indolifex HEL-45]
gi|161382464|gb|EDQ06873.1| OmpA domain protein [Oceanibulbus indolifex HEL-45]
Length = 641
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 2/163 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHV 80
+ +K+ S D + + S+D E + + I
Sbjct: 438 TGKKEANTTVASLLADKLGESADYSIDITYQEKLDPIAGLPTPEECEAEIGEILTIGKIT 497
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ L + IA +L + + IQ +TDS G NL +SQ RA+ + +
Sbjct: 498 FEPGNATIDASALGTMDDIAEVLKRCGDIPLEIQGYTDSQGRETMNLSLSQSRAESVLNE 557
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L R V ++ F+ +G+ + PI N T+ GR+ N+RIE ++
Sbjct: 558 LRARRVLTSSFL-AKGYGEENPIADNQTEEGREANRRIEFRLI 599
>gi|320015664|gb|ADV99235.1| putative exported protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 578
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L ML + P +I + HTD G + N ++S +RA+ ++
Sbjct: 446 SLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALR 505
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ S +V+G+ PI NDT GR N+R+EI + P+ +
Sbjct: 506 DWMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISLVPQAD 554
>gi|229894342|ref|ZP_04509525.1| Outer membrane protein [Yersinia pestis Pestoides A]
gi|229703740|gb|EEO90756.1| Outer membrane protein [Yersinia pestis Pestoides A]
Length = 327
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L ML + P +I + HTD G + N ++S +RA+ ++
Sbjct: 195 SLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALR 254
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ S +V+G+ PI NDT GR N+R+EI + P+ +
Sbjct: 255 DWMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISLVPQAD 303
>gi|186894908|ref|YP_001872020.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
PB1/+]
gi|186697934|gb|ACC88563.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 581
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L ML + P +I + HTD G + N ++S +RA+ ++
Sbjct: 449 SLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALR 508
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ S +V+G+ PI NDT GR N+R+EI + P+ +
Sbjct: 509 DWMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISLVPQAD 557
>gi|170023051|ref|YP_001719556.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
YPIII]
gi|169749585|gb|ACA67103.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
Length = 578
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L ML + P +I + HTD G + N ++S +RA+ ++
Sbjct: 446 SLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALR 505
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ S +V+G+ PI NDT GR N+R+EI + P+ +
Sbjct: 506 DWMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISLVPQAD 554
>gi|165940436|ref|ZP_02228930.1| PAL/OmpA-family membrane protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165911633|gb|EDR30316.1| PAL/OmpA-family membrane protein [Yersinia pestis biovar Orientalis
str. IP275]
Length = 307
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L ML + P +I + HTD G + N ++S +RA+ ++
Sbjct: 175 SLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALR 234
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ S +V+G+ PI NDT GR N+R+EI + P+ +
Sbjct: 235 DWMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISLVPQAD 283
>gi|255318660|ref|ZP_05359891.1| outer membrane protein [Acinetobacter radioresistens SK82]
gi|262379115|ref|ZP_06072271.1| outer membrane protein [Acinetobacter radioresistens SH164]
gi|17978530|gb|AAK57731.1| OmpA-like protein precursor [Acinetobacter radioresistens]
gi|255304342|gb|EET83528.1| outer membrane protein [Acinetobacter radioresistens SK82]
gi|262298572|gb|EEY86485.1| outer membrane protein [Acinetobacter radioresistens SH164]
Length = 348
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 63 IVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + V F + + ++ ++ P + +A L ++P+ I HTD+ G
Sbjct: 214 VEPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIDGHTDNTG 273
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
N +S RA+ +KS L+ ++ +GFA+ PI N TK GR N+R+
Sbjct: 274 PRALNERLSLARANSVKSSLVNEYNIDPSRLTAQGFAWDQPIADNSTKEGRAMNRRV 330
>gi|86609769|ref|YP_478531.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558311|gb|ABD03268.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 243
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 73 TCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
T +P + F + + + +L +A L P + + HTD+IG L NL +S
Sbjct: 130 TISLPGDLLFDFDKAEIRPEAASLLAQVAKSLEAMPGARVQVNGHTDNIGPLNYNLALSL 189
Query: 132 ERADVIKSYLIQRGVS-SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA+ +K YL + + GF P+ NDT+ GRQ N+R+++ I P
Sbjct: 190 RRANAVKDYLTKLLPEGHPISWTTSGFGPTLPVADNDTEAGRQRNRRVDLVIAP 243
>gi|51597552|ref|YP_071743.1| PAL/OmpA family membrane protein [Yersinia pseudotuberculosis IP
32953]
gi|186896682|ref|YP_001873794.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
PB1/+]
gi|51590834|emb|CAH22486.1| Putative PAL/OmpA-family membrane protein [Yersinia
pseudotuberculosis IP 32953]
gi|186699708|gb|ACC90337.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 578
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L ML + P +I + HTD G + N ++S +RA+ ++
Sbjct: 446 SLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALR 505
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ S +V+G+ PI NDT GR N+R+EI + P+ +
Sbjct: 506 DWMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISLVPQAD 554
>gi|153946939|ref|YP_001399719.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP
31758]
gi|152958434|gb|ABS45895.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
Length = 578
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L ML + P +I + HTD G + N ++S +RA+ ++
Sbjct: 446 SLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALR 505
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ S +V+G+ PI NDT GR N+R+EI + P+ +
Sbjct: 506 DWMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISLVPQAD 554
>gi|22126581|ref|NP_670004.1| hypothetical protein y2702 [Yersinia pestis KIM 10]
gi|22127241|ref|NP_670664.1| hypothetical protein y3365 [Yersinia pestis KIM 10]
gi|45443207|ref|NP_994746.1| OmpA family membrane protein [Yersinia pestis biovar Microtus str.
91001]
gi|108806286|ref|YP_650202.1| OmpA family membrane protein [Yersinia pestis Antiqua]
gi|108812671|ref|YP_648438.1| OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|145597850|ref|YP_001161926.1| OmpA-family membrane protein [Yersinia pestis Pestoides F]
gi|149367019|ref|ZP_01889052.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125]
gi|218928146|ref|YP_002346021.1| putative OmpA family membrane protein [Yersinia pestis CO92]
gi|229840896|ref|ZP_04461055.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842543|ref|ZP_04462698.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229903796|ref|ZP_04518909.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|270486867|ref|ZP_06203941.1| OmpA family protein [Yersinia pestis KIM D27]
gi|270487580|ref|ZP_06204654.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294502870|ref|YP_003566932.1| putative OmpA-family membrane protein [Yersinia pestis Z176003]
gi|21959587|gb|AAM86255.1|AE013873_3 hypothetical [Yersinia pestis KIM 10]
gi|21960312|gb|AAM86915.1|AE013938_3 hypothetical [Yersinia pestis KIM 10]
gi|45438075|gb|AAS63623.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Microtus str. 91001]
gi|108776319|gb|ABG18838.1| OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|108778199|gb|ABG12257.1| putative OmpA-family membrane protein [Yersinia pestis Antiqua]
gi|115346757|emb|CAL19641.1| putative OmpA-family membrane protein [Yersinia pestis CO92]
gi|145209546|gb|ABP38953.1| OmpA-family membrane protein [Yersinia pestis Pestoides F]
gi|149290633|gb|EDM40709.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125]
gi|229679566|gb|EEO75669.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|229690853|gb|EEO82907.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697262|gb|EEO87309.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|262361491|gb|ACY58212.1| putative OmpA-family membrane protein [Yersinia pestis D106004]
gi|262365418|gb|ACY61975.1| putative OmpA-family membrane protein [Yersinia pestis D182038]
gi|270335371|gb|EFA46148.1| OmpA family protein [Yersinia pestis KIM D27]
gi|270336084|gb|EFA46861.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294353329|gb|ADE63670.1| putative OmpA-family membrane protein [Yersinia pestis Z176003]
gi|320013943|gb|ADV97514.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 578
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L ML + P +I + HTD G + N ++S +RA+ ++
Sbjct: 446 SLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALR 505
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ S +V+G+ PI NDT GR N+R+EI + P+ +
Sbjct: 506 DWMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISLVPQAD 554
>gi|45441186|ref|NP_992725.1| hypothetical protein YP_1360 [Yersinia pestis biovar Microtus str.
91001]
gi|51595824|ref|YP_070015.1| OmpA family outer membrane protein [Yersinia pseudotuberculosis IP
32953]
gi|108806760|ref|YP_650676.1| hypothetical protein YPA_0763 [Yersinia pestis Antiqua]
gi|145598791|ref|YP_001162867.1| hypothetical protein YPDSF_1507 [Yersinia pestis Pestoides F]
gi|149366559|ref|ZP_01888593.1| putative exported protein [Yersinia pestis CA88-4125]
gi|167467063|ref|ZP_02331767.1| hypothetical protein YpesF_04015 [Yersinia pestis FV-1]
gi|218928612|ref|YP_002346487.1| hypothetical protein YPO1469 [Yersinia pestis CO92]
gi|229841445|ref|ZP_04461604.1| putative exported protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229843557|ref|ZP_04463700.1| putative exported protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|294503448|ref|YP_003567510.1| hypothetical protein YPZ3_1338 [Yersinia pestis Z176003]
gi|45436046|gb|AAS61602.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
gi|51589106|emb|CAH20726.1| OmpA family of outer membrane porins [Yersinia pseudotuberculosis
IP 32953]
gi|108778673|gb|ABG12731.1| hypothetical protein YPA_0763 [Yersinia pestis Antiqua]
gi|115347223|emb|CAL20117.1| putative exported protein [Yersinia pestis CO92]
gi|145210487|gb|ABP39894.1| hypothetical protein YPDSF_1507 [Yersinia pestis Pestoides F]
gi|149290933|gb|EDM41008.1| putative exported protein [Yersinia pestis CA88-4125]
gi|229689165|gb|EEO81228.1| putative exported protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229697811|gb|EEO87858.1| putative exported protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|262364848|gb|ACY61405.1| hypothetical protein YPD8_0715 [Yersinia pestis D182038]
gi|294353907|gb|ADE64248.1| hypothetical protein YPZ3_1338 [Yersinia pestis Z176003]
Length = 578
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L ML + P +I + HTD G + N ++S +RA+ ++
Sbjct: 446 SLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALR 505
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ S +V+G+ PI NDT GR N+R+EI + P+ +
Sbjct: 506 DWMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISLVPQAD 554
>gi|258545746|ref|ZP_05705980.1| peptidoglycan-associated lipoprotein [Cardiobacterium hominis ATCC
15826]
gi|258518991|gb|EEV87850.1| peptidoglycan-associated lipoprotein [Cardiobacterium hominis ATCC
15826]
Length = 189
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 68/189 (35%), Gaps = 9/189 (4%)
Query: 1 MIKELGLSMFIMTTIS-GCGLA-SREKKKVFLHKSNDT-----DIVNKRFGSSLDKAEDE 53
M ++ L + + + ++ GC E+ + + D +S +
Sbjct: 1 MKRKQALGLILFSILAFGCSSPYGLEEGEGAAPGQDGGFNGYGDGATYGNNNSFGRGGAG 60
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
D V+ +G + + F ++ + +++ A L P T +
Sbjct: 61 TGDYYNDPQYGVNVVGGPQSADKDRIIYFSYDSSAIDSRSEAVIREHAKYLRAHPQTRVV 120
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
++ HTD GT + N+ + + RA +K + S + + V + + P ++
Sbjct: 121 LEGHTDERGTREYNIGLGERRAYSVKERFVAA-GISPQQMRVLSYGEERPAAFGSSEEDY 179
Query: 173 QNNQRIEIQ 181
N+R I
Sbjct: 180 AKNRRAVIV 188
>gi|37527138|ref|NP_930482.1| hypothetical protein plu3255 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786572|emb|CAE15629.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 575
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 69 GDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G+ T + + V + L+ +L + P +I I HTDS G N
Sbjct: 432 GEPQTISLNSLALFDVGQAKLKAGSTKVLVNALINIRAKPGWMILIAGHTDSTGDATKNQ 491
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++S RA+ ++ +++Q S +V+G PI TN T GR N+R+EI++ P
Sbjct: 492 VLSLARAEAVRDWMLQTSDISPACFTVQGKGATSPIATNTTAAGRAANRRVEIRLIP 548
>gi|27365501|ref|NP_761029.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus CMCP6]
gi|37680458|ref|NP_935067.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus YJ016]
gi|320155883|ref|YP_004188262.1| 18K peptidoglycan-associated outer membrane lipoprotein [Vibrio
vulnificus MO6-24/O]
gi|27361649|gb|AAO10556.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus CMCP6]
gi|37199206|dbj|BAC95038.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus YJ016]
gi|319931195|gb|ADV86059.1| 18K peptidoglycan-associated outer membrane lipoprotein/
Peptidoglycan-associated lipoprotein precursor/ Outer
membrane protein P6/ OmpA/MotB precursor [Vibrio
vulnificus MO6-24/O]
Length = 181
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 63/181 (34%), Gaps = 6/181 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M ++ C + + T+ GS+ Q+
Sbjct: 6 VLKGLLIALPVM-AVTACSSSD----DAASNAGTSTETNQTTSGSANTTDTTVVTPIDQN 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + + ML A L+K + + I+ H D
Sbjct: 61 GQLSEQELKEQALRETQTIYFAFDNATISSDYEEMLAAHAAYLSKNVNLKVTIEGHADER 120
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + YL I++ + + P+ T+ N+R +
Sbjct: 121 GTPEYNIALGERRAQAVAKYLQAL-GVQADQIAIVSYGEEKPLLLGQTEEVYAKNRRAVL 179
Query: 181 Q 181
Sbjct: 180 V 180
>gi|295675611|ref|YP_003604135.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1002]
gi|295435454|gb|ADG14624.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1002]
Length = 168
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 60/182 (32%), Gaps = 20/182 (10%)
Query: 1 MIKELGLSMFIMTT--ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M+ +L + ++ ++ C + + + N ++D
Sbjct: 1 MMSKLRFAFAVVMVGALAACHSGVKLDENAGKGAGSGQPNPNDVATVNVDPL-------- 52
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
++ + P+LQ A L P + IQ +TD
Sbjct: 53 ---------NDPNSPLAKRSIYFDFDSYSVKDDYQPLLQQHAQYLKGHPQRHVLIQGNTD 103
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + NL + Q+RA+ ++ + S+ + + P+ T + N+R
Sbjct: 104 ERGTSEYNLALGQKRAEAVRR-SLSLMGVSDSQMEAVSLGKEKPLATGHDEASWAQNRRA 162
Query: 179 EI 180
++
Sbjct: 163 DL 164
>gi|224023377|ref|ZP_03641743.1| hypothetical protein BACCOPRO_00070 [Bacteroides coprophilus DSM
18228]
gi|224016599|gb|EEF74611.1| hypothetical protein BACCOPRO_00070 [Bacteroides coprophilus DSM
18228]
Length = 239
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 81/223 (36%), Gaps = 43/223 (19%)
Query: 1 MIKELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKR--------------- 42
M K + ++ +SGCG+++ K +
Sbjct: 1 MKKTTNIVALLLSGCLILSGCGMSNTAKGGLIGGGGGAALGALVGGLAGKGKSAAIGAAV 60
Query: 43 -----------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFVSEV-F 87
G +DKA + Q++ + + + + F +
Sbjct: 61 GAAVGTGAGVLIGKKMDKAAQQ-AQQIEGAEVEQVTDNNGLQAVKVTFDSGILFTTSSAT 119
Query: 88 LEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL--------KNNLLISQERADVIK 138
L L A LN+ +AI +TD+ G + NL +SQERA +
Sbjct: 120 LSSAAKASLSKFANNVLNQNRDMDVAIYGYTDNQGWRNSTKEQSVQKNLNLSQERAQSVS 179
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
SYL+ GVS+++ SV G P+ N T+ GRQ N+R+E+
Sbjct: 180 SYLLGCGVSASQIKSVEGMGESNPVADNSTEAGRQENRRVEVY 222
>gi|254282997|ref|ZP_04957965.1| outer membrane fibronectin-binding protein [gamma proteobacterium
NOR51-B]
gi|219679200|gb|EED35549.1| outer membrane fibronectin-binding protein [gamma proteobacterium
NOR51-B]
Length = 227
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 46/162 (28%), Gaps = 8/162 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ-MQLQDTGIVVSRIGDMITCYIPV 78
V D DK + D G + I V
Sbjct: 69 AVPTAPMMVQETPEPPGDEDGDGVTDDRDKCPGTPAGQAVDDNGCAL------IVFSGDV 122
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L +L ++ + + H DS G N +SQ RAD +
Sbjct: 123 LRFAFDSAELPADAASVLADAVEFVDAMGGKKLIVSGHADSSGPDAYNQSLSQRRADAV- 181
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ R + G+ P+ N T GR N+R+EI
Sbjct: 182 KAFLVESGIPERQLEAVGYGETMPVADNATASGRAQNRRVEI 223
>gi|253568033|ref|ZP_04845444.1| outer membrane protein [Bacteroides sp. 1_1_6]
gi|298387668|ref|ZP_06997219.1| lipoprotein PG3 [Bacteroides sp. 1_1_14]
gi|251842106|gb|EES70186.1| outer membrane protein [Bacteroides sp. 1_1_6]
gi|298259524|gb|EFI02397.1| lipoprotein PG3 [Bacteroides sp. 1_1_14]
Length = 260
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/229 (22%), Positives = 83/229 (36%), Gaps = 41/229 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSN--------------------------- 34
+K + L M I SGC + K + +
Sbjct: 26 MKWMVLFMSITMIFSGCASMNNTGKGAAIGGGSGAALGAILGGVIGKGKGAAIGAAIGTA 85
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFV-SEVFLEK 90
G +DKA E + ++ + + + + F L
Sbjct: 86 VGAGTGALIGKKMDKAAAEAKQ-IEGAQVEQITDNNGLQAVKVTFDSGILFTTGNATLSA 144
Query: 91 KFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL--------KNNLLISQERADVIKSYL 141
L A LN+ ++I +TD+ G + NL +SQERA + SYL
Sbjct: 145 AAKSALSKFANNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSRQKNLNLSQERAQSVASYL 204
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ GVSSN+ V+G PI +NDT GR+ N+R+E+ ++ + K
Sbjct: 205 LNCGVSSNQIKGVQGMGESDPIASNDTAAGREQNRRVEVYMYASEQMIK 253
>gi|238026336|ref|YP_002910567.1| OmpA domain-containing protein [Burkholderia glumae BGR1]
gi|237875530|gb|ACR27863.1| OmpA domain protein [Burkholderia glumae BGR1]
Length = 170
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 22/185 (11%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+ L L++ +++ ++ C + K + T
Sbjct: 1 MMTNKARLALAVMMISALAACKSGVKLDDKANQGNAISTQPNPNDVAQ------------ 48
Query: 58 LQDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V + D + ++ P+LQ A L P+ I IQ +
Sbjct: 49 -----VSVDPLNDPNSPLAKRSVYFDFDSYSVSDQYQPLLQAHAQYLKSHPARHILIQGN 103
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD GT + NL + Q+RA+ ++ + + + + P T + N+
Sbjct: 104 TDERGTSEYNLALGQKRAEAVRR-GLSLLGVPDSQMEAVSLGKEKPQATGHDEAAWAQNR 162
Query: 177 RIEIQ 181
R +I
Sbjct: 163 RADIV 167
>gi|162452165|ref|YP_001614532.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161162747|emb|CAN94052.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 467
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 1/170 (0%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+ + + + T G + ++ +
Sbjct: 299 AAAPSEAPPNAPEVVEQLRITAGEMTLPGGKVLSVDEHSSEAEIARYLDAGAAEGPRRFS 358
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L + P L+ +A IL+ +P+ + I+ HTD++G + N +S RA
Sbjct: 359 MEGINFQFGTTELTEASRPKLEALADILDAYPTARVRIEGHTDAVGGAEGNRSLSLARAQ 418
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+++ L R ++ +R I V G P+ NDT GR N+RI++ + R
Sbjct: 419 EVRNELTARQIAPDR-IEVAGMGANQPVAPNDTAGGRAQNRRIDVTVLSR 467
>gi|238927470|ref|ZP_04659230.1| flagellar motor protein B [Selenomonas flueggei ATCC 43531]
gi|238884752|gb|EEQ48390.1| flagellar motor protein B [Selenomonas flueggei ATCC 43531]
Length = 308
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 66/179 (36%), Gaps = 11/179 (6%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIG 69
SG G ++ + +N D + L +A+ + ++ +
Sbjct: 65 FFSGMGPSTAPSPPTMTNGANTADAAYMKENQDLSEAQKKLDQYIKDNNLQDQVSTELTE 124
Query: 70 DMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + + F L+ ++ +IA +L P + I HTD++
Sbjct: 125 EGLMVRLKEKALFSSGSAVLQGDAEKIVPVIAGVLASLPE-RVTISGHTDNVPISTAQYP 183
Query: 129 I-----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S +++ + + + S G++ PI +NDT+ GR N+R+E+ I
Sbjct: 184 SNWELSSARAVSLMRGVMAVQPSLNPARFSALGYSEYRPIASNDTEEGRAQNRRVEVFI 242
>gi|157964921|ref|YP_001499745.1| peptidoglycan-associated lipoprotein precursor [Rickettsia
massiliae MTU5]
gi|157844697|gb|ABV85198.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia
massiliae MTU5]
Length = 164
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 29/182 (15%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M +L L+ + ++GC R +F + +
Sbjct: 9 MKTKLTLAFLALFVLAGCNTTKR---------------------------APQFDGNMMN 41
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G S + D L K L+ A L+K P + ++ H D
Sbjct: 42 QGEETSLMKDFEKHAGNAVWFAFDSSALSPKAKEELERQACWLSKHPEVKVTVEGHCDER 101
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IE 179
G + N+ + + RA +K +L +G+ NR ++ + P +T+ N+R +
Sbjct: 102 GAKEYNIGLGERRAAAVKKFLAHKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVT 160
Query: 180 IQ 181
+
Sbjct: 161 VV 162
>gi|227356660|ref|ZP_03841046.1| peptidoglycan-associated lipoprotein [Proteus mirabilis ATCC 29906]
gi|227163168|gb|EEI48099.1| peptidoglycan-associated lipoprotein [Proteus mirabilis ATCC 29906]
Length = 176
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 61/181 (33%), Gaps = 22/181 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ K L L++ ++ ++ C + + + T+ + + E Q +
Sbjct: 17 VFKGLMLALPLV-AVAACSSNKNDDQTDTSNNVPVTEQGPTAEELARQQLEQLKQTNI-- 73
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + ++ +L A L PS I I+ H D
Sbjct: 74 ------------------VYFGFDKYDVTSEYAQLLDAHAAFLRANPSVRITIEGHADER 115
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S +S+ + + P + N+R +
Sbjct: 116 GTPEYNIALGERRANAV-KMYLQGKGVSADQLSIVSYGKEKPAVLGHDEAAYAKNRRAVL 174
Query: 181 Q 181
Sbjct: 175 V 175
>gi|325275254|ref|ZP_08141211.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
gi|324099595|gb|EGB97484.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
Length = 323
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 72/165 (43%), Gaps = 3/165 (1%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
I + + LD+ E + + ++D+ + + R +++ +PV S+ +
Sbjct: 75 DDQQAKGPVVPKIDQQATQAWLDEYEPKLREAIKDSKLELERRDNVLAVTLPVDSSYNPD 134
Query: 86 --VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L L + +A + P T + + H D+ G N +S ERA + +
Sbjct: 135 RPNMLLPMSLGPITRVAKTVEGDPKTAVLVLGHADTSGAAAANQKLSLERAASVSAIFRL 194
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
G+ +R ++++G P ND+ GR N+R+E+ + P+ +
Sbjct: 195 SGLQRDR-LTLKGMGSVMPRAANDSPEGRALNRRVEMLLTPQNTM 238
>gi|307720703|ref|YP_003891843.1| OmpA/MotB domain-containing protein [Sulfurimonas autotrophica DSM
16294]
gi|306978796|gb|ADN08831.1| OmpA/MotB domain protein [Sulfurimonas autotrophica DSM 16294]
Length = 180
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 69/186 (37%), Gaps = 9/186 (4%)
Query: 2 IKELGL--SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K + L + + SGC +K ++ + + +E+
Sbjct: 1 MKSIVLSSVVTALLVFSGCSTKEPAVQKKTEEVASPVVQEVEAVTTETVASENSTINSST 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTD 118
+ + I +P + ++ + + A + + + ++ + D
Sbjct: 61 N-----ELSMNAIESKLPTIYFDFDKYNIKPEMQERIDAAAELGKTGAKAFSVKLEGNCD 115
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ + N + +RA+ +K L+ G+ +R IS+ + P+ T T+ N+R+
Sbjct: 116 EWGSDEYNFALGLKRANAVKKALVADGIDPSR-ISMVSYGESNPVCTEHTRACWAKNRRV 174
Query: 179 EIQIFP 184
++ P
Sbjct: 175 NFKLLP 180
>gi|212219329|ref|YP_002306116.1| IcmN protein, OmpA family [Coxiella burnetii CbuK_Q154]
gi|212013591|gb|ACJ20971.1| IcmN protein, OmpA family [Coxiella burnetii CbuK_Q154]
Length = 212
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 6 GLSMFIMTTISGCGL-ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
GL + + ++S C + V+ + + K + +LQ G+
Sbjct: 34 GLLLALGMSLSACSSYTTVSSAPVYTIPAPKPSLA---------KIRAHYIHRLQADGVQ 84
Query: 65 VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V ++G+ + + F L + P L+ +A ++ + + + ++TD+ G +
Sbjct: 85 VIKLGETMRFVLLSDCLFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYTDNNGHI 144
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ ++ +A V+ S+L R + R G+ K P+D N + GR NN+R+EI
Sbjct: 145 ERQQALTTRQAQVVASFLWSR-GINARLAYAVGYNRKNPVDYNGSSHGRFNNRRVEI 200
>gi|209363772|ref|YP_001423789.2| IcmN protein, OmpA family [Coxiella burnetii Dugway 5J108-111]
gi|212212032|ref|YP_002302968.1| IcmN protein, OmpA family [Coxiella burnetii CbuG_Q212]
gi|207081705|gb|ABS76937.2| IcmN protein, OmpA family [Coxiella burnetii Dugway 5J108-111]
gi|212010442|gb|ACJ17823.1| IcmN protein, OmpA family [Coxiella burnetii CbuG_Q212]
Length = 212
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 6 GLSMFIMTTISGCGL-ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
GL + + ++S C + V+ + + K + +LQ G+
Sbjct: 34 GLLLALGMSLSACSSYTTVSSAPVYTIPAPKPSLA---------KIRAHYIHRLQADGVQ 84
Query: 65 VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V ++G+ + + F L + P L+ +A ++ + + + ++TD+ G +
Sbjct: 85 VIKLGETMRFVLLSDCLFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYTDNNGHI 144
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ ++ +A V+ S+L R + R G+ K P+D N + GR NN+R+EI
Sbjct: 145 ERQQALTTRQAQVVASFLWSR-GINARLAYAVGYNRKNPVDYNGSSHGRFNNRRVEI 200
>gi|215919216|ref|NP_820613.2| ompA family protein [Coxiella burnetii RSA 493]
gi|206584100|gb|AAO91127.2| IcmN protein, OmpA family [Coxiella burnetii RSA 493]
Length = 212
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 6 GLSMFIMTTISGCGL-ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
GL + + ++S C + V+ + + K + +LQ G+
Sbjct: 34 GLLLALGMSLSACSSYTTVSSAPVYTIPAPKPSLA---------KIRAHYIHRLQADGVQ 84
Query: 65 VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V ++G+ + + F L + P L+ +A ++ + + + ++TD+ G +
Sbjct: 85 VIKLGETMRFVLLSDCLFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYTDNNGHI 144
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ ++ +A V+ S+L R + R G+ K P+D N + GR NN+R+EI
Sbjct: 145 ERQQALTTRQAQVVASFLWSR-GINARLAYAVGYNRKNPVDYNGSSHGRFNNRRVEI 200
>gi|262068028|ref|ZP_06027640.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693]
gi|291378250|gb|EFE85768.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693]
Length = 403
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
S + + + + F + + + L+ +A +L + I HTDS + +
Sbjct: 285 SIEANSLLITLDSGILFDVDKYDVRPEAEVALKNLAVVLKEADVKAFQIDGHTDSDASDE 344
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N ++S+ RA+ +KS+L +G+++ IS+ G+ PI +NDT G+Q N+R+EI I
Sbjct: 345 HNQVLSENRANAVKSFLAAQGLTAE--ISINGYGESRPIASNDTAEGKQKNRRVEIII 400
>gi|186472491|ref|YP_001859833.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184194823|gb|ACC72787.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 166
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 33/186 (17%)
Query: 1 MIKELGLSMFIMTT--ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K L L+ ++ ++ CG LD++++E
Sbjct: 1 MKKLLTLAACAVSLSMLAACG--------------------------GLDRSKEETLN-- 32
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ GI V++ + + +P V F +E L L + +LN+ +I I+ HT
Sbjct: 33 KQAGIEVTQTKEGVQVRLPEKVLFNFNESSLRPDAATALSRVVVVLNRTHKPMI-IEGHT 91
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D++GT + N +S+ RA + ++R S I+++G+A+ P+ N+T GR N+R
Sbjct: 92 DNVGTREYNQQLSEARAKSVADE-LERRGISASRITLKGYAFDRPVADNNTPEGRARNRR 150
Query: 178 IEIQIF 183
EI +
Sbjct: 151 TEIVVM 156
>gi|39995135|ref|NP_951086.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
gi|39981897|gb|AAR33359.1| OmpA domain protein [Geobacter sulfurreducens PCA]
gi|298504165|gb|ADI82888.1| OmpA family outer membrane lipoprotein [Geobacter sulfurreducens
KN400]
Length = 194
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 69/187 (36%), Gaps = 10/187 (5%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ L+ F ++ + GC K + + + + E + + +
Sbjct: 9 VALACFALSLVGGCAKKEMVKPDQAAPTTAAAPVSPAPQPAQPKE-EPVKAQTITEAPVA 67
Query: 65 VSRIG-------DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL-NKFPSTVIAIQSH 116
V+ + + L + L A L K P+ ++I+ H
Sbjct: 68 VASQASDTAGRAEAAETSLERIYFDFDAFVLSQTARDTLSRNAEALLKKMPNAKVSIEGH 127
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
D G+ + NL + ++RA +YLI GV + R +S+ + + P+D T+ N+
Sbjct: 128 CDERGSDEYNLALGEKRAKTAMNYLITLGVPAAR-LSIISYGEEKPLDPGHTEEAWAKNR 186
Query: 177 RIEIQIF 183
R E I
Sbjct: 187 RDEFVIV 193
>gi|13472158|ref|NP_103725.1| hypothetical protein mlr2359 [Mesorhizobium loti MAFF303099]
gi|14022903|dbj|BAB49511.1| mlr2359 [Mesorhizobium loti MAFF303099]
Length = 504
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 70/189 (37%), Gaps = 11/189 (5%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKR-----FGSSLDKAEDEFQMQLQDTGIVV 65
++ A ++ + + + +D+ Q+ G+ V
Sbjct: 309 AGALLALNPSAPVTIERASVAAPAEPVQAKPPSPIHPDTTQIDRIRAALAQQIAAGGLGV 368
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
GD I I + F + L+ +F P+ IA L+ I I HTD++ K
Sbjct: 369 GTKGDFIVVEISNQLLFASGQAELKAQFQPIAADIAKALDAEAG-PIKIVGHTDNVKPKK 427
Query: 125 NNLLISQERADVIK----SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
++ S V + +I R + +SV G PI N T GR N+R+++
Sbjct: 428 SSAFKSNFDLSVARAKAVQAMIARQLKDPSRLSVDGKGEDEPIADNATADGRAKNRRVDV 487
Query: 181 QIFPRGNIK 189
I + ++
Sbjct: 488 MIPKQETLQ 496
>gi|156936052|ref|YP_001439968.1| hypothetical protein ESA_03946 [Cronobacter sakazakii ATCC BAA-894]
gi|156534306|gb|ABU79132.1| hypothetical protein ESA_03946 [Cronobacter sakazakii ATCC BAA-894]
Length = 411
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 7/154 (4%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFL-EKKFL 93
T R + + + +++ + V D + F S + ++
Sbjct: 243 VTVQQPAREVAPVLNLRGFLRPEIEAGLVAVRDEADRSVVILKGDGLFASASTVVRGRYE 302
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSN 149
P++ +A +N I + ++D++ +N +S RA+ ++ L N
Sbjct: 303 PVIDRVAQAMNNVSG-KILVVGYSDNVPIRSARFASNYELSLARAESVQKMLQAHLADPN 361
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R + +G PI N+T R N+R+EI +
Sbjct: 362 R-VKAQGRGEMDPIAPNNTPENRARNRRVEITLL 394
>gi|239929192|ref|ZP_04686145.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 195
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 75/194 (38%), Gaps = 16/194 (8%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVN--------------KRFGSSLDKAEDEF 54
M ++T++ G A ++ + T + + +
Sbjct: 1 MLVVTSLIGATTAYADESPSVPPGTEATASAPVELDPNDPDLKLPDGATLAEPKVLDIKQ 60
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
++ Q + + V F L + + IA + +T I +
Sbjct: 61 VVEDQSGDERREDTNSDVKFALQAEVLFGKDSAKLGAQAKARIATIAEEIKTQNATRIRV 120
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
TD++G+ + ++S++RA+ + L Q S+ VRG+ +YPI N T+ GR+
Sbjct: 121 FGFTDNLGSSAHGDVLSRQRANAVHGVLEQELNDSDVTYEVRGYGEQYPIADNSTEAGRK 180
Query: 174 NNQRIEIQIFPRGN 187
N+R+EI FPR
Sbjct: 181 KNRRVEIS-FPRAE 193
>gi|255532299|ref|YP_003092671.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255345283|gb|ACU04609.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 175
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 72/178 (40%), Gaps = 13/178 (7%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+F+ + +K ++ +T + + Q +L V R
Sbjct: 6 IVFLALLLPAAYSCKTKKILAKSPETAETKSTDNEIFN--------IQRELPGD--QVER 55
Query: 68 IGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL-NKFPSTVIAIQSHTDSIGTLKN 125
I + F + +L +K + +A ++ NK+ + ++ H+D GT +
Sbjct: 56 TAAGIRFTFSSEILFPTNSSYLNEKSKSRIDDVAKVIRNKYADRKVLVEGHSDKTGTPEY 115
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
NL +S++RA +K+YL+ I G P+ N TK GR N+R+E+ +
Sbjct: 116 NLWLSEKRAASVKTYLVSL-GIPEANIKTSGLGDTRPVADNKTKEGRLINRRVEVTVL 172
>gi|148975688|ref|ZP_01812519.1| outer membrane protein [Vibrionales bacterium SWAT-3]
gi|145964761|gb|EDK30013.1| outer membrane protein [Vibrionales bacterium SWAT-3]
Length = 355
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ L + +Q I +L +P + + I HTDS G + N++IS++RA
Sbjct: 229 SFSQGTFATNSTELSDEGKAAVQPIVEVLQTYPQSTVNIVGHTDSTGAAEYNMMISKKRA 288
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + I+ + I+ G + PI +NDT GR N+R+E I
Sbjct: 289 AAVAA-YIEEQGIESSRITASGEGEEKPIASNDTAEGRAQNRRVEATI 335
>gi|119773835|ref|YP_926575.1| outer membrane protein and related peptidoglycan-associated
(LipO)protein [Shewanella amazonensis SB2B]
gi|119766335|gb|ABL98905.1| outer membrane protein and related peptidoglycan-associated
(LipO)protein [Shewanella amazonensis SB2B]
Length = 484
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 46/108 (42%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + + + P+L+++A+ L + P+ + HTD G NL +S+ RA
Sbjct: 372 TLDGLLFDYDSDRMLPESKPVLEVLASYLKQNPALNFYVVGHTDDQGDKAYNLSLSERRA 431
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L + G P+ +N + G+ N+R+E+ +
Sbjct: 432 AAVVKALGADYQIKPAQLEAHGMGEFSPVASNANEAGQSQNRRVELVL 479
>gi|170759482|ref|YP_001787603.1| chemotaxis MotB protein [Clostridium botulinum A3 str. Loch Maree]
gi|169406471|gb|ACA54882.1| putative chemotaxis MotB protein [Clostridium botulinum A3 str.
Loch Maree]
Length = 254
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 75/216 (34%), Gaps = 36/216 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHK-----------SNDTDIVNKRFGSS------- 46
L L + + + K + + + G S
Sbjct: 23 LTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKAGSNVLQEGGSGGASVGKSGVSIVPS 82
Query: 47 --------LDKAEDEFQMQLQDTG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ + + + + +++ +G + V D + I V F + + K+
Sbjct: 83 DSVTEDIKMKEIKSKLEKEIEKSGYFDKVKVGVDADGLEIDIQDVVLFNSGDAEVLKQSS 142
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSN 149
+L I+ +L I + HTD+ ++N +S RA + ++L G
Sbjct: 143 ALLTQISKMLKGL-DNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPA 201
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S++ + P N T+ GR N+R+EI I +
Sbjct: 202 NKLSIQAYGEYMPKFDNATEAGRAKNRRVEISIVRK 237
>gi|167578218|ref|ZP_02371092.1| OmpA family domain protein [Burkholderia thailandensis TXDOH]
Length = 333
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + ++ + L +A +L P+ + I HTD+ G +N+ +SQ+R
Sbjct: 224 VALYGLYFDTDKAQVKPESKAQLDEMAKLLTANPNLKVYIVGHTDNQGQFAHNVDLSQKR 283
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
AD + L + + +G A P+ +N + GR N+R+E+
Sbjct: 284 ADAVAQTLATTYRIAPGRLVAKGVASLSPVASNGDEAGRAQNRRVELV 331
>gi|300853354|ref|YP_003778338.1| putative flagellar motor protein MotB [Clostridium ljungdahlii DSM
13528]
gi|300433469|gb|ADK13236.1| predicted flagellar motor protein MotB [Clostridium ljungdahlii DSM
13528]
Length = 283
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 64/173 (36%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDMITC 74
+ K +S+ ++ K + L + + + L G + +
Sbjct: 71 SVKDSVKTVDKPTESDQSEEQVKMEANKLKQLKKQVDSYLAANGLSQSVSSQIDERGLVV 130
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLI 129
+ + F + ++ + L I ++N+ + I ++ HTD++ +N +
Sbjct: 131 SLSNTLFFDTGKAEIKPEIQNTLMGIGKMINQMGN-SIRVEGHTDNVPISNNEYASNWQL 189
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S RA + +L + ++ G+ + N T R N+R++I I
Sbjct: 190 SCARAANVTQFLQNKVGIKPEKLTSVGYGEYRSVTDNSTDANRAKNRRVDIII 242
>gi|329904214|ref|ZP_08273697.1| peptidoglycan-associated lipoprotein [Oxalobacteraceae bacterium
IMCC9480]
gi|327548110|gb|EGF32831.1| peptidoglycan-associated lipoprotein [Oxalobacteraceae bacterium
IMCC9480]
Length = 174
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 58/183 (31%), Gaps = 13/183 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
++ L + + S C ++K +S + +++ L
Sbjct: 1 MRNLSTFAVVAASVLLFSACSSTKLDEKPPVEDRSGSAAMAAPADTRTVNPVNAGSTDPL 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
++ +F +L+ A L+ S I IQ +TD
Sbjct: 61 N---------DPQGVLAKRSVYFDYDSYVVKAEFKSVLEAHARYLSANKSRKIIIQGNTD 111
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G + NL + Q+R++ + + ++ + + P T + N+R
Sbjct: 112 DRGGREYNLALGQKRSEAV-RQAMSLMGVADNQLEAVSLGKEKPKATGSDEAAYAENRRA 170
Query: 179 EIQ 181
+I
Sbjct: 171 DIV 173
>gi|325106498|ref|YP_004276152.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324975346|gb|ADY54330.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 435
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ V G + + + ++ +V ++ I + + +
Sbjct: 291 GTPSGTVVDGAGCPMTGPREIVREKI----VVTEADRKIVDEAIKNLEFDLGKATIRSTS 346
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L +A +L + + + + HTD+ G+++ N+ +S+ERA+ +K+YL+ +G +++R I
Sbjct: 347 YATLNRVAQLLVE-KNFSLKLAGHTDNTGSMELNMRLSKERAESVKAYLVSQGANASR-I 404
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G+ PI +N T GRQ N+R+E +
Sbjct: 405 EATGYGPTQPIASNKTAEGRQKNRRVEFTL 434
>gi|237798824|ref|ZP_04587285.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331021677|gb|EGI01734.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 389
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 8/173 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G A + + L K + LD+ E + ++D+ + R D++ PV
Sbjct: 128 GSADKTDQPKALPTP-----DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPV 182
Query: 79 HVSFVSE--VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
SF + L L + +A ++ T + + H D+ G + N ISQERA
Sbjct: 183 DSSFNPDRPAMLLPNTLGPITRLAKVVEGDQKTAVLVLGHGDTSGPTEANQKISQERAQS 242
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + +S+RG P ND+ GR N+R+EI + P+ ++
Sbjct: 243 VAAIFRL-SGLERNRLSLRGMGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 294
>gi|227327557|ref|ZP_03831581.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium
carotovorum subsp. carotovorum WPP14]
gi|253687644|ref|YP_003016834.1| peptidoglycan-associated lipoprotein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|261822329|ref|YP_003260435.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium
wasabiae WPP163]
gi|251754222|gb|ACT12298.1| peptidoglycan-associated lipoprotein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|261606342|gb|ACX88828.1| peptidoglycan-associated lipoprotein [Pectobacterium wasabiae
WPP163]
Length = 169
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 68/181 (37%), Gaps = 18/181 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + ++ C + + +++ SS ++A + Q ++
Sbjct: 6 VLKGLMLALPV-LAVAACSSNKNADNDQSSMGAGNNGMMDGGNMSSSEQARLQMQELQRN 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + +F ML A L PS + I+ H D
Sbjct: 65 NIV----------------YFGLDKYDVSSEFAQMLDAHAAFLRSNPSYKVTIEGHADER 108
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S+ IS+ + + P + N+R +
Sbjct: 109 GTPEYNIALGERRANAV-QMYLQGKGVSSDQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 167
Query: 181 Q 181
Sbjct: 168 V 168
>gi|332519368|ref|ZP_08395835.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045216|gb|EGI81409.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 370
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 1/134 (0%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ + + + + L + L + L + + I
Sbjct: 238 KLSKKTLSKVDKAKPLETKTIYTFKNILFEFDKAILVNTSIEELDKLNLHLKENKNLNIE 297
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTD+IG K N +S +RA + YLI + I GF P+ N ++ R
Sbjct: 298 IYGHTDNIGLAKRNQELSLQRAKSVSEYLISK-GLKKERIQWFGFGSSKPLVKNSSEDNR 356
Query: 173 QNNQRIEIQIFPRG 186
N+R+E ++ +
Sbjct: 357 AKNRRVEFKLIDKN 370
>gi|323159967|gb|EFZ45936.1| ompA family protein [Escherichia coli E128010]
Length = 250
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ T + + V + L+ +L + P +I + +T
Sbjct: 115 PEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 174
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 175 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 234
Query: 178 IEIQIFPRGN 187
+EI + PR +
Sbjct: 235 VEISLVPRSD 244
>gi|197119876|ref|YP_002140303.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
gi|197089236|gb|ACH40507.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
Length = 199
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/199 (12%), Positives = 59/199 (29%), Gaps = 18/199 (9%)
Query: 2 IKELGLSMFIMTTI-----SGCGLASREKKKV------------FLHKSNDTDIVNKRFG 44
++++ L ++ T +GC K + +
Sbjct: 1 MRKMILGSLVVLTFGALLSAGCAKKDVVKTEEPISAAQSAPAPAPVQTQQQARPEAPAAQ 60
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ + + + + + + L ++ L A L+
Sbjct: 61 QPITETTPSREQPVAQETPKDAGKAQEVQAELQKVYFNFDSSDLSEEARASLSKNAEYLS 120
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ T + I+ + D G+ N+ + + RA K + ++ +S + + P D
Sbjct: 121 RQAGTKVRIEGNCDERGSDDYNMALGERRAKSAKD-YLVNLGIASDRLSTISYGEEKPAD 179
Query: 165 TNDTKVGRQNNQRIEIQIF 183
+ N+R E I
Sbjct: 180 PGHDEAAWAKNRRDEFVIV 198
>gi|326792989|ref|YP_004310810.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427]
gi|326543753|gb|ADZ85612.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427]
Length = 240
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 56/149 (37%), Gaps = 6/149 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
K +D + + + +T ++ F + ++ + L I
Sbjct: 82 SASQEIQTKLKDYLETHDLTEQVSLHVEPQGLTLSFDDNILFDSGKADIQSAYKKNLLEI 141
Query: 100 ATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
IL F + + ++ HTD++ +N ++ RA + I G +S
Sbjct: 142 CDILKTFTN-DVVVEGHTDNLPIHTSQFSSNWELASIRAINVVHLFIDEGKLPASKLSAI 200
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ PI +NDT GR N+RI+I +
Sbjct: 201 SYGEYRPIASNDTPEGRAKNRRIDIILLS 229
>gi|163789638|ref|ZP_02184076.1| chemotaxis motB protein [Carnobacterium sp. AT7]
gi|159875170|gb|EDP69236.1| chemotaxis motB protein [Carnobacterium sp. AT7]
Length = 249
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 57/141 (40%), Gaps = 6/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
++ + + + V D I I + F + L + ++ KF
Sbjct: 104 NEVVQFLEDKNITSQASVEYDQDGIYVNIQESILFGSGSAIIADSGKQTLNDLGELIQKF 163
Query: 107 PSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ + I+ +TD++ +N +S RA + YL + + ++ +G+ +P
Sbjct: 164 DNA-VVIEGYTDNVPMYNANFSSNWELSTGRALSVLRYLSEERDVNPTRLAAKGYGEYHP 222
Query: 163 IDTNDTKVGRQNNQRIEIQIF 183
+ ND++ R N+R+ I I
Sbjct: 223 LVPNDSEENRSKNRRVNIVIV 243
>gi|161520749|ref|YP_001584176.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
gi|189353068|ref|YP_001948695.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
gi|160344799|gb|ABX17884.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
gi|189337090|dbj|BAG46159.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
Length = 163
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 55/176 (31%), Gaps = 21/176 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ + + GC A++ + + + ++ V LD
Sbjct: 7 FAVIAALALLGGCHHAAKTPENTGMAPAPSSEAVTTVTADDLDNPNSPLAK--------- 57
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
++ + +LQ A L PS + IQ +TD GT +
Sbjct: 58 -----------RSVYFDFDSYTVKPEDQSLLQAHANYLRSHPSRHVLIQGNTDERGTSEY 106
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL + Q R+ + S ++ + + P+ + N+R ++
Sbjct: 107 NLALGQRRSQAVMS-ALETLGVPASQLEAVSLGKEKPVALGHDEAAWAQNRRADLV 161
>gi|229827389|ref|ZP_04453458.1| hypothetical protein GCWU000182_02777 [Abiotrophia defectiva ATCC
49176]
gi|229788327|gb|EEP24441.1| hypothetical protein GCWU000182_02777 [Abiotrophia defectiva ATCC
49176]
Length = 305
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIG--DMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILN 104
+KA + + + + + I I + F L+K +L A IL
Sbjct: 157 EKASEAINQFKLNDMVQLKMDTSYNYIGLSIDGYFLFDSGSAELKKGADKVLDKAAGILM 216
Query: 105 KFPSTVIAIQSHTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
KF I I+ HTD++ KNNL +S RA + YL + + +S G
Sbjct: 217 KFKDADIVIEGHTDNVPQTNTVKYKNNLWLSGARAMTVLEYLTEVEHMDPKKLSASGKGE 276
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFPR 185
PI +N T GRQ N+R+EI+IF +
Sbjct: 277 YEPIASNKTAEGRQKNRRVEIKIFNK 302
>gi|83716533|ref|YP_439774.1| OmpA family domain-containing protein [Burkholderia thailandensis
E264]
gi|167616356|ref|ZP_02384990.1| OmpA family domain protein [Burkholderia thailandensis Bt4]
gi|257142917|ref|ZP_05591179.1| OmpA family domain-containing protein [Burkholderia thailandensis
E264]
gi|83650358|gb|ABC34422.1| OmpA family domain protein [Burkholderia thailandensis E264]
Length = 333
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + ++ + L +A +L P+ + I HTD+ G +N+ +SQ+R
Sbjct: 224 VALYGLYFDTDKAQVKPESKAQLDEMAKLLTANPNLKVYIVGHTDNQGQFAHNVDLSQKR 283
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
AD + L + + +G A P+ +N + GR N+R+E+
Sbjct: 284 ADAVAQTLATTYRIAPGRLVAKGVASLSPVASNGDEAGRAQNRRVELV 331
>gi|222056198|ref|YP_002538560.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221565487|gb|ACM21459.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 349
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
++ ++ +F Q+ I+V+ D + +P V F + K L
Sbjct: 180 SGSEEKENAYAAFRRDFSDQIGKGEILVTEYPDKLIVTMPEQVLFRSGSATINKGGKKAL 239
Query: 97 QLIATILNKFPSTVIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ +A+IL K + I I+ HTDS +N +S RA + +L ++G + F
Sbjct: 240 ERVASILKKVKNNRIRIEGHTDSTPIKSKHRYASNWDLSAARAASVVRHLQKKGAVNPEF 299
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+++ G+ P N+T GR N+RIEI + P
Sbjct: 300 LTLAGYGPYAPAAANNTSRGRSLNRRIEIALIP 332
>gi|325300740|ref|YP_004260656.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM
18170]
gi|324320293|gb|ADY38183.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170]
Length = 209
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 80/207 (38%), Gaps = 28/207 (13%)
Query: 2 IKELGLSMFIMTTISGC--------GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
+K++ ++ + GC A+ +K+ L ++N V G + + E
Sbjct: 1 MKKIIFTI-CTICLVGCKSKEMITVSNANLSEKESILIENNSNYSVASIVGIGAELIKKE 59
Query: 54 FQMQLQDTGIVVSRIGDMI------------------TCYIPVHVSFVSEVFLEKKFLPM 95
+ + + I + L K +
Sbjct: 60 QEKAINKKLLERENKLKNIPGLVVTTIDETNGKKIFKATMQNEILFKFDSHELNKNAKSI 119
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + I+N+ P+T I + HTD+IG N+L+SQ RA + +YL + I+
Sbjct: 120 LDEMIGIINEIPNTKIKVIGHTDNIGEKGYNILLSQNRAAAVGNYLR-NAGIETKNITEE 178
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G + P+ +N T+ GR N+R+EI +
Sbjct: 179 GKGFDEPVSSNKTEAGRAKNRRVEIFL 205
>gi|209522485|ref|ZP_03271080.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. H160]
gi|209497081|gb|EDZ97341.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. H160]
Length = 444
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 7/161 (4%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLE 89
+ + I ++ +++ + V D I ++ L+
Sbjct: 283 PTAQASVIAPAAMLAAAATLSTFLAPEIRQGLVSVHETADRSIVTITGDNLFASGSATLD 342
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRG 145
+ ++ IA L P I + HTD +N +SQ RA+ +++ L
Sbjct: 343 PAYDALIGRIAEALKSVPG-KIVVTGHTDDQRLVSARFPSNWHLSQARAESVRAMLASLS 401
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ R S G P+ +N+T GR N+R+EI + G
Sbjct: 402 GAPAR-FSAEGRGDAEPLASNETPAGRAKNRRVEITLLAPG 441
>gi|182418302|ref|ZP_02949597.1| chemotaxis protein MotB [Clostridium butyricum 5521]
gi|237666437|ref|ZP_04526422.1| chemotaxis protein MotB [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377684|gb|EDT75228.1| chemotaxis protein MotB [Clostridium butyricum 5521]
gi|237657636|gb|EEP55191.1| chemotaxis protein MotB [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 244
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 57/145 (39%), Gaps = 6/145 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
+ ++ +T I +++ + + + ++ F + L +L I T+++
Sbjct: 100 EDVKEFVDKNQLNTTIDIAQDENGVVLQLRDNILFESGKADLIDGSSEILDKINTLISTL 159
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I I+ HTD++ K+N +S RA + Y Q S G+ P
Sbjct: 160 PN-SIVIEGHTDNVPISTSIYKDNWDLSTARASNVLRYFTQLKGQDPTRFSAAGYGEYRP 218
Query: 163 IDTNDTKVGRQNNQRIEIQIFPRGN 187
N T R N+R+ I I
Sbjct: 219 KVDNSTDENRAQNRRVNILIVSNNE 243
>gi|157962384|ref|YP_001502418.1| peptidoglycan-associated lipoprotein [Shewanella pealeana ATCC
700345]
gi|157847384|gb|ABV87883.1| Peptidoglycan-associated lipoprotein [Shewanella pealeana ATCC
700345]
Length = 179
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 58/178 (32%), Gaps = 7/178 (3%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + + IS C S + + + G Q Q
Sbjct: 8 KAMLVVLPIMAISACSSTSESETDATSSTESSSSSEYANNGVETGGVAPVLTPQEQQRLK 67
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ I + ++F +L L + P+ + I+ H D GT
Sbjct: 68 YQELRKEHII------YFDFDRSSVSQQFAEILDAHGDYLVEHPNVRVMIEGHADERGTP 121
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA + +Q +S+ + + P+D + + G N+R +
Sbjct: 122 EYNIALGERRAKAVAK-YLQGMGVQPSQMSIVSYGEEKPLDFSRSDDGFAKNRRAVLV 178
>gi|1170998|sp|P46827|YTXE_BACME RecName: Full=Uncharacterized 24.6 kDa protein in ccpA 3'region;
AltName: Full=ORF2
gi|415666|gb|AAA22297.1| homologue to motB; ORF2; putative [Bacillus megaterium]
Length = 218
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 64/191 (33%), Gaps = 14/191 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTD--------IVNKRFGSSLDKAEDEFQM 56
+ L + + +K + ++ +++ + L K + +
Sbjct: 23 VTLILVFFILLFSMSSVDNQKFQTVVNSLTSGGSLASVEKSQQSQKLDNILAKVQGYLKE 82
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
I R + + V F + + KK P L + + + P+ I ++
Sbjct: 83 NKLQHVITAKRDERGVVLILQEQVLFETGQADILKKGTPFLDELGRLFSTIPN-DIKVEG 141
Query: 116 HTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
HTD+ N +S RA + YL S G+ P+ N +
Sbjct: 142 HTDNRPIHTYAYPSNWELSAARASGVIRYLTNHFSLSANRFEALGYGDTKPLVPNTSNDN 201
Query: 172 RQNNQRIEIQI 182
Q N+R+EI I
Sbjct: 202 LQKNRRVEIII 212
>gi|197284482|ref|YP_002150354.1| peptidoglycan-associated outer membrane lipoprotein [Proteus
mirabilis HI4320]
gi|194681969|emb|CAR41402.1| peptidoglycan-associated lipoprotein [Proteus mirabilis HI4320]
Length = 165
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 61/181 (33%), Gaps = 22/181 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ K L L++ ++ ++ C + + + T+ + + E Q +
Sbjct: 6 VFKGLMLALPLV-AVAACSSNKNDDQTDTSNNVPVTEQGPTAEELARQQLEQLKQTNI-- 62
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + ++ +L A L PS I I+ H D
Sbjct: 63 ------------------VYFGFDKYDVTSEYAQLLDAHAAFLRANPSVRITIEGHADER 104
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S +++ + + P + N+R +
Sbjct: 105 GTPEYNIALGERRANAV-KMYLQGKGVSADQLAIVSYGKEKPAVLGHDEAAYAKNRRAVL 163
Query: 181 Q 181
Sbjct: 164 V 164
>gi|163856192|ref|YP_001630490.1| outer membrane protein A precursor [Bordetella petrii DSM 12804]
gi|163259920|emb|CAP42221.1| outer membrane protein A precursor [Bordetella petrii]
Length = 193
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + + + + L+ + +L +A I HT
Sbjct: 66 VAQAPAKPTPMATKVVFNA-DTFFDFDKSTLKPEGRQLLDQVAQQAQGIDLETIIAVGHT 124
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
DSIGT K N +S+ RA +KSYL+ +GV NR I G P+ +N T+ GR N+R
Sbjct: 125 DSIGTEKYNQGLSERRAASVKSYLVSKGVDPNR-IYTEGKGELQPVASNKTREGRAQNRR 183
Query: 178 IEIQIF 183
+EI++
Sbjct: 184 VEIEVV 189
>gi|301059327|ref|ZP_07200254.1| OmpA family protein [delta proteobacterium NaphS2]
gi|300446556|gb|EFK10394.1| OmpA family protein [delta proteobacterium NaphS2]
Length = 434
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ V++ L+ + ++ IA ++ + I+ HTDS G N +S+ERA+
Sbjct: 329 RGILFDVNKATLKPASMGVINEIAKMMRAHEDINLRIEGHTDSDGEKTFNQKLSEERAEA 388
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+K+ L+ GV S+R + +GF P+ N T G+ NN+R+E
Sbjct: 389 VKNALVDAGVDSSR-LKTKGFGESKPVSDNTTAEGKANNRRVEFV 432
>gi|307728550|ref|YP_003905774.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1003]
gi|323524837|ref|YP_004226990.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1001]
gi|307583085|gb|ADN56483.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1003]
gi|323381839|gb|ADX53930.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1001]
Length = 169
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 60/184 (32%), Gaps = 21/184 (11%)
Query: 1 MIKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M+ +L ++ ++ ++ C + + + T
Sbjct: 1 MMSKLRFAFAVLMVGALAACHSGVKLDENANKGGAVSTQPNPNDVAQ------------- 47
Query: 59 QDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + D ++ + +LQ A L P + IQ +T
Sbjct: 48 ----VNVDPLNDPNSPLAKRSIYFDFDSYSVKDDYQSLLQQHAQYLKSHPQRHVLIQGNT 103
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ + ++ + + P T + N+R
Sbjct: 104 DERGTSEYNLALGQKRAEAVRR-SLSLMGVTDSQMEAVSLGKEKPQATGHDESSWAQNRR 162
Query: 178 IEIQ 181
++
Sbjct: 163 ADLV 166
>gi|294501552|ref|YP_003565252.1| putative flagellar motor channel protein [Bacillus megaterium QM
B1551]
gi|294351489|gb|ADE71818.1| putative flagellar motor channel protein [Bacillus megaterium QM
B1551]
Length = 203
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 65/191 (34%), Gaps = 14/191 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTD--------IVNKRFGSSLDKAEDEFQM 56
+ L + + +K + ++ +++ S L K +D +
Sbjct: 8 VTLILVFFILLFSMSSVDNQKFQTVVNSLTSGGSLASVEKSQQSQKLDSILAKVQDYLKE 67
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
I R + + V F + + KK P L + + + P+ I ++
Sbjct: 68 NKLQNVITAKRDERGVVLILQEQVLFETGQADILKKGTPFLDELGRLFSTIPN-DIKVEG 126
Query: 116 HTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
HTD+ N +S RA + YL S G+ P+ N +
Sbjct: 127 HTDNRPIHTYRYPSNWELSAARASGVIRYLTNHFSLSANRFEALGYGDTKPLVPNTSNGN 186
Query: 172 RQNNQRIEIQI 182
Q N+R+EI I
Sbjct: 187 LQKNRRVEIII 197
>gi|124007678|ref|ZP_01692381.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123986800|gb|EAY26572.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 705
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ + + + L++ L + ++ + I +HTD++G
Sbjct: 580 VALEVLKMNAKIVLNHINFASGSSKLDEDSYVELAKVVQLMENNKDIKLEISAHTDNVGV 639
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N+ +S++RA + +YLI+ GV R +S +G+ P+ N TK + N+R+E ++
Sbjct: 640 YSRNMRLSRQRAQSVFNYLIKTGVDKKRLVS-KGYGSARPLVPNTTKKNKAKNRRVEFKV 698
Query: 183 F 183
Sbjct: 699 I 699
>gi|27382457|ref|NP_773986.1| hypothetical protein blr7346 [Bradyrhizobium japonicum USDA 110]
gi|27355628|dbj|BAC52611.1| blr7346 [Bradyrhizobium japonicum USDA 110]
Length = 316
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
Query: 32 KSNDTDIVNKRFGSSLDKAE-DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
S N+ + + AE ++ D + +G+ + + L+
Sbjct: 164 ASVIVSQNNQDIYAQVTVAELGAIANKMVDAAAMAKGLGETGHIALYGIYFDTDKAVLKP 223
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+ P L+ IA +L P + I HTDS G + NL +S+ RA+ + + L + +
Sbjct: 224 ESRPTLEQIAKLLTSQPQLNVFIVGHTDSQGAYEYNLDLSKRRAEAVAAELAKSFRIAQA 283
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ G P+ +N T GR N+R+E+
Sbjct: 284 RLRTAGVGLLAPVGSNATDAGRALNRRVELV 314
>gi|308448669|ref|XP_003087717.1| hypothetical protein CRE_26028 [Caenorhabditis remanei]
gi|308253504|gb|EFO97456.1| hypothetical protein CRE_26028 [Caenorhabditis remanei]
Length = 189
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 58/168 (34%), Gaps = 6/168 (3%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSS-LDKAEDEFQMQLQDTGIVVSRIGDMI 72
++GC +K +S +S L + L +
Sbjct: 17 VMTGCAS----RKPAATVESGTNPNSATTVNTSGLSEDAALNAQNLNGASSKGVTEANKA 72
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
V L LQ A L ++ +A+ HTD GT + N+ + +
Sbjct: 73 FLAKRVVHFDYDSSDLSNDDYQTLQAHAQFLIANANSKVALTGHTDERGTREYNMALGER 132
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
RA ++SYLI + + + PI+T + + N+R+EI
Sbjct: 133 RAKAVESYLITN-GVKANQLEAVSYGKEMPINTGHDEAAWKENRRVEI 179
>gi|284035576|ref|YP_003385506.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283814869|gb|ADB36707.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 306
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 65/188 (34%), Gaps = 16/188 (8%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG--IVVSRIGD 70
+ + + T + + ++ + +
Sbjct: 120 ILLFKTTATPKPTSSATASAAKPTPASPPPVVAKPVSQPPAVKTVAANSERVVPPKTLDA 179
Query: 71 MITCYIPVHV-------------SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ P+ V S+ L P L+ + + P+ I + HT
Sbjct: 180 KVVYTPPLVVAPVGKTTQLQALQFVQSKTELLPDAQPALEQLLQFMQSQPTAEIELSGHT 239
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G NLL+S++R + + + + I+ RG+ PI +N+++ RQ N+R
Sbjct: 240 DNQGDFDQNLLLSKQRVE-VIKAYLVKNGIPASRITTRGYGPTRPIASNNSETTRQQNRR 298
Query: 178 IEIQIFPR 185
+E+ + +
Sbjct: 299 VEMIVLKQ 306
>gi|91228645|ref|ZP_01262561.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
gi|91187796|gb|EAS74112.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
Length = 204
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 77/197 (39%), Gaps = 12/197 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + + + +S C + R + + + D D +E + T
Sbjct: 1 MKHIAF-ITLSLMLSACSSSDRGDEYDY-IDTPIADQWADHIDDDSDGVINE-RDLCPGT 57
Query: 62 --GIVVSRIGDMITC----YIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQ 114
G + G + + V F ++ + F + ++ L ++P+T I IQ
Sbjct: 58 PLGAEIDNDGCGSYVDSSQEMQIRVLFANDSDVINPIFTQQILELSDFLKEYPNTSIEIQ 117
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ GT ++NL +S+ RA+ ++ + + S +++ G+ +V
Sbjct: 118 GYASRTGTAEHNLDLSKRRAENVRKE-LMKNGISGDRVTIVGYGDTVLATQGTDQVSHAL 176
Query: 175 NQRIEIQIFP-RGNIKK 190
N+R+ + +G +KK
Sbjct: 177 NRRVTATVIGHKGEVKK 193
>gi|90577944|ref|ZP_01233755.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
gi|90441030|gb|EAS66210.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
Length = 352
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ I+ +P L + L+ IA L FP++ + + HTDS G+ N +
Sbjct: 228 EPISVTMP---FAFDSNTLTAEDQARLEPIAQRLVNFPNSELVVIGHTDSRGSEAYNQKL 284
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S+ERA + YL++ + G P+ +NDT GR N+R+++
Sbjct: 285 SEERAKTVAVYLMKHFNIDASRVKGEGRGELDPVASNDTAEGRAQNRRVDVT 336
>gi|114046457|ref|YP_737007.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113887899|gb|ABI41950.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 485
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 47/108 (43%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L + P+L+++A+ L + P+ + HTD G N +S+ RA
Sbjct: 373 TLEGLLFDYDSERLLPESKPVLEVLASYLKQNPTLSFYVVGHTDDKGERSYNQSLSERRA 432
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L + ++ G P+ +N G++ N+R+E+ +
Sbjct: 433 ATVIKQLSDGFKIPSAQLTAHGNGEYSPVASNTNDAGQKLNRRVELVL 480
>gi|108757918|ref|YP_632429.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108461798|gb|ABF86983.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 620
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 63/168 (37%), Gaps = 9/168 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC ++ + + G D V G I +
Sbjct: 449 GCPDPDNDQDGIPDAEDQCPLEAETINGVQDDD------GCPDKGKAQVRVEGARIVI-L 501
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + +L+ +A L P ++ ++ HTD G NL +SQ RA
Sbjct: 502 DKVYFGTGQDVILARSHGLLRQVAATLKANPRILMVRVEGHTDDQGNDMKNLDLSQRRAR 561
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + + + + + G+ P+DTN+T GR+NN+R+E I
Sbjct: 562 NVVA-FLVKEGIAAQRLDAVGYGEAKPVDTNETAKGRENNRRVEFNIV 608
>gi|228926763|ref|ZP_04089831.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228832876|gb|EEM78445.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 227
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 60/144 (41%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D+ + + L + GI V R + + + + ++ + ++ +
Sbjct: 83 MDELYKKLKAYLDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGF 142
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS + N +S RA + +LI+ ++ ++ G+A
Sbjct: 143 FQSVPN-PIVVEGHTDSRPIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 201
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 202 DTKPVVPNDSPQNWEKNRRVVIYI 225
>gi|29346604|ref|NP_810107.1| OmpA family outer membrane protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338500|gb|AAO76301.1| outer membrane protein, OmpA family [Bacteroides thetaiotaomicron
VPI-5482]
Length = 266
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/229 (22%), Positives = 83/229 (36%), Gaps = 41/229 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSN--------------------------- 34
+K + L M I SGC + K + +
Sbjct: 32 MKWMVLFMSITMIFSGCASMNNTGKGAAIGGGSGAALGAILGGVIGKGKGAAIGAAIGTA 91
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFV-SEVFLEK 90
G +DKA E + ++ + + + + F L
Sbjct: 92 VGAGTGALIGKKMDKAAAEAKQ-IEGAQVEQITDNNGLQAVKVTFDSGILFTTGNATLSA 150
Query: 91 KFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL--------KNNLLISQERADVIKSYL 141
L A LN+ ++I +TD+ G + NL +SQERA + SYL
Sbjct: 151 AAKSALSKFANNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSRQKNLNLSQERAQSVASYL 210
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ GVSSN+ V+G PI +NDT GR+ N+R+E+ ++ + K
Sbjct: 211 LNCGVSSNQIKGVQGMGESDPIASNDTAAGREQNRRVEVYMYASEQMIK 259
>gi|150019639|ref|YP_001311893.1| OmpA/MotB domain-containing protein [Clostridium beijerinckii NCIMB
8052]
gi|149906104|gb|ABR36937.1| OmpA/MotB domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 244
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 71/182 (39%), Gaps = 10/182 (5%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRI 68
+G + + NK + + + + +++ G + V
Sbjct: 54 MIFAGGTGVMHQDGNSAISMEESGVSDNKAEEDKMTEVKKMIEEEIKKEGYSDKVKVDLN 113
Query: 69 GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTL 123
+ + I V F E + K +L I+ +L I + +TD+ G
Sbjct: 114 SEGLAISIQDVVLFNSGEADVLKDVSQLLLKISHMLYGL-DNEIKVAGYTDNVPINNGKF 172
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++N +S RA + +Y++ G + IS++ + P +N T+ GR N+R+EI +
Sbjct: 173 RSNWDLSAMRAINVLNYMVSTGGINQEKISIQAYGEHMPKASNATEDGRAKNRRVEIFVV 232
Query: 184 PR 185
+
Sbjct: 233 RK 234
>gi|294140562|ref|YP_003556540.1| peptidoglycan-associated lipoprotein [Shewanella violacea DSS12]
gi|293327031|dbj|BAJ01762.1| peptidoglycan-associated lipoprotein [Shewanella violacea DSS12]
Length = 178
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 56/178 (31%), Gaps = 8/178 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + +S C S + + + G + Q
Sbjct: 8 KAMLVALPIIALSACSSTSESETDATGSTTGSGSELVTG-GVETGAVTPILTPEEQQRLK 66
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ I + F +L+ L + P+ + I+ H D GT
Sbjct: 67 YQELRKEHII------YFDFDRSSVSAHFAEILRAHGHYLVEHPNVRLMIEGHADERGTP 120
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA + +Q +S+ + + P+D + T G N+R +
Sbjct: 121 EYNIALGERRAKAVAK-YLQGMGVLPSQMSIVSYGEEKPLDFSRTDDGFAINRRAVLV 177
>gi|156977475|ref|YP_001448381.1| hypothetical protein VIBHAR_06262 [Vibrio harveyi ATCC BAA-1116]
gi|156529069|gb|ABU74154.1| hypothetical protein VIBHAR_06262 [Vibrio harveyi ATCC BAA-1116]
Length = 334
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L L LN++P + I +TDS G NL +S+ RA +
Sbjct: 219 SGTFEFDSAKLTDSVSERLDNFVNFLNEYPQAQVEITGYTDSSGPAAYNLKLSERRAQAV 278
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YLI G+ ++R +V G + P+ N T GR+ N+R+ + +
Sbjct: 279 ADYLIAAGIDADR-FTVTGMGEEDPVADNSTHEGREQNRRVVVHV 322
>gi|209695366|ref|YP_002263295.1| peptidoglycan-associated lipoprotein precursor [Aliivibrio
salmonicida LFI1238]
gi|208009318|emb|CAQ79584.1| peptidoglycan-associated lipoprotein precursor [Aliivibrio
salmonicida LFI1238]
Length = 185
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 63/181 (34%), Gaps = 2/181 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ ++ +S C + +S + + +
Sbjct: 6 LLKSLLIALPVV-ALSACSSSDSATDSTAGQESTNGTETTSGTAGEGQTDTTVVTVVEGE 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + + ++ ML A L+K P + ++ H D
Sbjct: 65 EVLTEQEVKEQALRQVQTVYFAFDNSTISSEYEDMLAAHAAFLSKAPEVKVTVEGHADER 124
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + YL S IS+ + + P+ T N+R +
Sbjct: 125 GTPEYNIALGERRANAVAKYLQAL-GVSADQISIVSYGEEKPLVLGQTAEDYAKNRRAVL 183
Query: 181 Q 181
Sbjct: 184 V 184
>gi|253991307|ref|YP_003042663.1| hypothetical protein PAU_03834 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782757|emb|CAQ85922.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 577
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L+ +L + P +I I HTDS G + N ++S RA+ ++
Sbjct: 440 SLFDVGQSRLKAGSAKVLMNALIDIKAKPGWLIVISGHTDSTGNTEKNRVLSLARAEAVR 499
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+L+Q +V+G P+ TN T GR N+R+EI++ P
Sbjct: 500 DWLLQTSDIPLACFAVQGEGATRPVATNSTAAGRAANRRVEIRLVPNA 547
>gi|26987864|ref|NP_743289.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|24982567|gb|AAN66753.1|AE016303_8 OmpA family protein [Pseudomonas putida KT2440]
Length = 344
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLE 89
I K + LD+ E + + ++D+ + + R +++ +PV S+ + L
Sbjct: 100 GPVVPKIDQKATQAWLDEYEPKLREAIKDSKLELERRDNVLAVTLPVDSSYNPDRPNMLL 159
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L + +A + P T + + H DS G N +S ERA + + G+ +
Sbjct: 160 PMSLGPITRVAKTVEGDPKTAVLVLGHADSSGAAVANQKLSLERAASVSAIFRLSGLQRD 219
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
R ++++G P ND+ GR N+R+E+ + P+ +
Sbjct: 220 R-LTLKGMGSVMPRAANDSAEGRALNRRVEMLLTPQNTM 257
>gi|323498434|ref|ZP_08103430.1| outer membrane protein OmpA [Vibrio sinaloensis DSM 21326]
gi|323316507|gb|EGA69522.1| outer membrane protein OmpA [Vibrio sinaloensis DSM 21326]
Length = 322
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L + L + LN +P + + +TD+ G N +IS++RA
Sbjct: 207 QLGTGSFKLNSTELNPESASQLDKLVDFLNTYPQATVEVIGYTDTSGAASYNQMISEKRA 266
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + L +GV ++R IS +G PI +N T+ GR+ N+R+E+ +
Sbjct: 267 QSVAAALEAKGVDASR-ISAKGEGENDPIASNATREGREMNRRVEVIV 313
>gi|77464505|ref|YP_354009.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1]
gi|77388923|gb|ABA80108.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1]
Length = 310
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G ++ R+ + + V LE + P L +A L + P+ + I HTD+ G
Sbjct: 187 GTLILRLEETGAAVLEGLVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDASG 246
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L+ N+ +S+ RA ++ LI R ++ G Y P TN T+ GR N+R+E+
Sbjct: 247 GLEGNVTLSRARAVSVRERLIARHGVDGAQVTADGVGYLAPRATNRTEEGRARNRRVEVM 306
Query: 182 IF 183
+
Sbjct: 307 LL 308
>gi|325953930|ref|YP_004237590.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323436548|gb|ADX67012.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 284
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 5/128 (3%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
I V + ++ + ++ + + L IA I+ + + I+ +TD++
Sbjct: 142 IDVQVLKGVVYISLADNMLYKSGSYEISPAAGETLSKIAKIIKDYRDYDVLIEGNTDNVP 201
Query: 122 TLKNN----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N +S RA + L + + ++ G P+ TN T+ G+ N+R
Sbjct: 202 INRPNIRNNWDLSALRASSVVQALQNQYGVDPKRLTAGGRGEYNPVTTNATEEGKSKNRR 261
Query: 178 IEIQIFPR 185
+I I P+
Sbjct: 262 TQIIITPK 269
>gi|308273524|emb|CBX30126.1| hypothetical protein N47_D29350 [uncultured Desulfobacterium sp.]
Length = 219
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 68/185 (36%), Gaps = 11/185 (5%)
Query: 5 LGLSMFIMTTISGCGLAS---REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ + F + ++ + + + R S++ + + D
Sbjct: 32 MLMITFFVMLLTMSSINQRSLKNTFNYLKQSIGGSAYQGHRGSESIENIKAALKN--IDG 89
Query: 62 GIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD-- 118
+ + I + + F + ++K+ +L IA + + P+ I I HTD
Sbjct: 90 SVDIKEDERGIVLSLHEDILFEPGKSVIKKENYRILDSIAAVADACPN-KIMIMGHTDDL 148
Query: 119 --SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+G ++N +S R + +Y I +V G+ P+ N++ R N+
Sbjct: 149 PVQVGEYESNWELSAYRGLYVLNYFINNKHLPPDRFNVGGYGAFRPLFPNNSAKNRSLNR 208
Query: 177 RIEIQ 181
R+EI
Sbjct: 209 RVEII 213
>gi|217959212|ref|YP_002337760.1| flagellar motor protein MotS [Bacillus cereus AH187]
gi|217063689|gb|ACJ77939.1| putative chemotaxis protein MotB [Bacillus cereus AH187]
Length = 225
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 58/144 (40%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D + + + + GI V R + + + + ++ + ++ +
Sbjct: 81 MDDLYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISKLVGF 140
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS N +S RA + +LI+ ++ ++ G+A
Sbjct: 141 FQSVPN-SIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 199
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 200 DTKPVVPNDSPQNWEKNRRVVIYI 223
>gi|92113977|ref|YP_573905.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
gi|91797067|gb|ABE59206.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
Length = 177
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 11/176 (6%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ ++GC + D + + Q G
Sbjct: 10 FAVALSLAVLAGCSSTG---------GTQDGSMDGTSGTGAGGTGTASSQGMGDGQGTSG 60
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + D + F + +F +L A L P+T + ++ H D GT +
Sbjct: 61 TSMSDRDAIPEQRTIYFAFDRDTIRPEFESVLSAHAEYLQSHPNTNVVLEGHADERGTRE 120
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
NL + + RA ++ YL S I + + + P + N+R+
Sbjct: 121 YNLGLGERRARAVEQYLTVE-GVSASQIEIVSYGEERPAVRGHDEESYAQNRRVVF 175
>gi|121997146|ref|YP_001001933.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1]
gi|121588551|gb|ABM61131.1| OmpA/MotB domain protein [Halorhodospira halophila SL1]
Length = 246
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 7/167 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ ++ D + L+ ++ +L + + D + P +
Sbjct: 78 APTPEQEVHDDLPPADPEHTDTAEILEALQEALAEELAAGDVELGEGEDGVLLRFPEQAA 137
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI----SQERADV 136
F + + F+P+L +A +L P I + HTD I + S RA
Sbjct: 138 FALGSKEISEPFVPVLDRVAGVLADTPGL-IRVSGHTDDIPIRSDRFRSNFELSTARAIS 196
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ L G++ R I +G P+ N+T R N+R+++ +
Sbjct: 197 VVHILKDAGITPERLI-AQGHGETRPLAPNETPEQRARNRRVDVHLV 242
>gi|33597667|ref|NP_885310.1| outer membrane protein A precursor [Bordetella parapertussis 12822]
gi|33602447|ref|NP_890007.1| outer membrane protein A precursor [Bordetella bronchiseptica RB50]
gi|33574095|emb|CAE38420.1| outer membrane protein A precursor [Bordetella parapertussis]
gi|33576886|emb|CAE33966.1| outer membrane protein A precursor [Bordetella bronchiseptica RB50]
Length = 193
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + +L +A I HTDSIGT N +S+ RA +
Sbjct: 84 DTFFDFDKSTLKPEGRQLLDQVAQQAGTIDLETIIAVGHTDSIGTEAYNQKLSERRAAAV 143
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + I G PI +N T+ GR N+R+EI+I
Sbjct: 144 KTYLVSK-GIDPNRIYTEGKGELQPIASNKTREGRAQNRRVEIEIV 188
>gi|167840769|ref|ZP_02467453.1| hypothetical protein Bpse38_29109 [Burkholderia thailandensis
MSMB43]
Length = 405
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V D + F + +++P+L +A LN+ P
Sbjct: 253 RVAKFLEPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNQVP 312
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +TD +N +S+ERA+ + LI + I+ G P+
Sbjct: 313 G-SVRVSGYTDDTPVHSARFASNWDLSRERAEAV-RGLIAARLDRPDRIAAEGRGTLDPV 370
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
ND+ R N+R+EI +
Sbjct: 371 APNDSPANRARNRRVEITLM 390
>gi|167576750|ref|ZP_02369624.1| hypothetical protein BthaT_01360 [Burkholderia thailandensis TXDOH]
Length = 437
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V D + F + +++P+L IA LN+ P +
Sbjct: 290 LEPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRIADALNRVPG-SVR 348
Query: 113 IQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ +TD +N +S+ERA+ + LI + I+ G P+ ND+
Sbjct: 349 VSGYTDDTPVHTARFASNWDLSRERAEAV-RGLIAARLDRPDRITAEGRGTLDPVAPNDS 407
Query: 169 KVGRQNNQRIEIQIF 183
R N+R+EI +
Sbjct: 408 PANRARNRRVEITLM 422
>gi|57168718|ref|ZP_00367850.1| omp18 [Campylobacter coli RM2228]
gi|305432654|ref|ZP_07401815.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter coli
JV20]
gi|1245150|gb|AAC35420.1| omp18 [Campylobacter coli]
gi|4454089|emb|CAA10786.1| PAL protein, putative [Campylobacter jejuni]
gi|57019999|gb|EAL56679.1| omp18 [Campylobacter coli RM2228]
gi|304444365|gb|EFM37017.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter coli
JV20]
Length = 165
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 61/184 (33%), Gaps = 23/184 (12%)
Query: 1 MIKELGLSMFI-MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L S+ ISGC S SN G +D +
Sbjct: 1 MKKILFSSIAAFALVISGCSTKSTSVSGDTSVDSNRG--TGGSDGWDIDSKISQLND--- 55
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTD 118
+ + + ++ A I N + I ++ + D
Sbjct: 56 ---------------TLGKVYFDFDKFNIRPDMQNVVNTNANIFNNEVSGVSITVEGNCD 100
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N + +RA +K LI + ++ I+V+ + P+ T TK N+R
Sbjct: 101 EWGTDEYNQALGLKRAKAVKEALIAQ-GVNSDRIAVKSYGETNPVCTEKTKACDAQNRRA 159
Query: 179 EIQI 182
E ++
Sbjct: 160 EFKL 163
>gi|255038851|ref|YP_003089472.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254951607|gb|ACT96307.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 673
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + S + L L IA + +P+ I ++ HTD+ G ++ N+ +S +R
Sbjct: 563 IRLSNTMFSQSSAEVTPASLVELDRIAETMQTYPTMEILLEGHTDNQGEVQKNVKLSADR 622
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +K YL+ + R I + + PI +N T+ RQ N+R+E I
Sbjct: 623 VEQVKKYLLSK-GIDGRRIQTKAWGPARPIASNLTEQTRQKNRRVEFTIL 671
>gi|239832781|ref|ZP_04681110.1| peptidoglycan-associated lipoprotein [Ochrobactrum intermedium LMG
3301]
gi|239825048|gb|EEQ96616.1| peptidoglycan-associated lipoprotein [Ochrobactrum intermedium LMG
3301]
Length = 183
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 26/173 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++F+ ++GC
Sbjct: 27 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSAQDFT----------------- 69
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + + L A L ++P I I+ H D GT +
Sbjct: 70 -VNVGDRI-------FFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADERGTRE 121
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + Q RA + +L RGV +NR ++ + + P+ D N+R
Sbjct: 122 YNLALGQRRAAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADSCWSQNRR 173
>gi|168179911|ref|ZP_02614575.1| chemotaxis MotB protein [Clostridium botulinum NCTC 2916]
gi|182669337|gb|EDT81313.1| chemotaxis MotB protein [Clostridium botulinum NCTC 2916]
Length = 254
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 74/216 (34%), Gaps = 36/216 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHK-----------SNDTDIVNKRFGSS------- 46
L L + + + K + + + G +
Sbjct: 23 LTLLLALFIVMFAMSKVDTAKLQKASQEFNVIFKAGSNVLQEGGSGGASVGKAGVSIVPS 82
Query: 47 --------LDKAEDEFQMQLQDTG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ + + + + +++ G + V D + I V F + + K+
Sbjct: 83 DSVIEDIKMKEIKSKLEKEIKKNGYSDKVKVGVDADGLEIDIQDVVLFNSGDAEVLKQSS 142
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSN 149
+L I+ +L I + HTD+ ++N +S RA + ++L G
Sbjct: 143 ALLTQISKMLKGL-DNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPA 201
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S++ + P N T+ GR N+R+EI I +
Sbjct: 202 NKLSIQAYGEYMPKFDNATEAGRAKNRRVEISIVRK 237
>gi|229138428|ref|ZP_04267017.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26]
gi|228644965|gb|EEL01208.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26]
Length = 213
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 58/144 (40%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D + + + + GI V R + + + + ++ + ++ +
Sbjct: 69 MDDLYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISKLVGF 128
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS N +S RA + +LI+ ++ ++ G+A
Sbjct: 129 FQSVPN-SIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 187
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 188 DTKPVVPNDSPQNWEKNRRVVIYI 211
>gi|323496601|ref|ZP_08101654.1| peptidoglycan-associated lipoprotein [Vibrio sinaloensis DSM 21326]
gi|323318347|gb|EGA71305.1| peptidoglycan-associated lipoprotein [Vibrio sinaloensis DSM 21326]
Length = 175
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 67/181 (37%), Gaps = 12/181 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ + I+ C + ++N + S +D+ + +L++
Sbjct: 6 VLKGLLIALPV-LAITACSSSDDAANASGSTETNQSQTAEGTVVSPIDQNGLLTEQELKE 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A L+K P+ + I+ H D
Sbjct: 65 QALRETQT----------IYFAFDNATIAGDYEEMLAAHAAYLSKNPALKVTIEGHADER 114
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + YL IS+ + + P+ + N+R +
Sbjct: 115 GTPEYNIALGERRATAVAKYLQAL-GVQADQISIVSYGEEKPLLLGQDEDVYAKNRRAVL 173
Query: 181 Q 181
Sbjct: 174 V 174
>gi|260642406|ref|ZP_05415772.2| lipoprotein PG3 [Bacteroides finegoldii DSM 17565]
gi|260622249|gb|EEX45120.1| lipoprotein PG3 [Bacteroides finegoldii DSM 17565]
Length = 260
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 79/220 (35%), Gaps = 41/220 (18%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSN--------------------------- 34
+K + L M + SGC + K + +
Sbjct: 26 MKFMVLFMSVAMIFSGCASMNNTGKGAAIGGGSGAALGAILGGVIGKGKGAAIGAAIGTA 85
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSFV-SEVFLEK 90
G +DKA E + ++ + + + + F L
Sbjct: 86 VGAGTGALIGKKMDKAAAEAKQ-IEGAQVEQITDNNGLKAVKVTFDSGILFTTGNASLSP 144
Query: 91 KFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL--------KNNLLISQERADVIKSYL 141
L A LN+ ++I +TD+ G + NL +SQERA + SYL
Sbjct: 145 AAKSALSKFANNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSRQKNLNLSQERAQSVASYL 204
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ GVSSN+ V+G P+ +NDT GR+ N+R+E+
Sbjct: 205 LNCGVSSNQIKGVQGMGESDPVASNDTAAGREQNRRVEVY 244
>gi|260768865|ref|ZP_05877799.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
furnissii CIP 102972]
gi|260616895|gb|EEX42080.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
furnissii CIP 102972]
gi|315180558|gb|ADT87472.1| Peptidoglycan-associated lipoprotein [Vibrio furnissii NCTC 11218]
Length = 179
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 67/185 (36%), Gaps = 16/185 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREK----KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
++K L +++ + ++ C + + S V+ S +D+ +
Sbjct: 6 VLKGLLIALPV-LAVTACSSSDEAANASGSETNQTTSGTAGNVDTTVVSPMDENAQLSEQ 64
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+L++ + ++ + + ML A L K PS + I+ H
Sbjct: 65 ELKEQALRETQT----------IYFAFDNATIASDYEEMLAAHAVYLTKNPSLKVTIEGH 114
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
D GT + N+ + + RA + ++ I++ + + P+ T+ N+
Sbjct: 115 ADERGTPEYNIALGERRAQAVAK-YLEALGVQADQIAIVSYGEEKPLLLGQTEEVYAKNR 173
Query: 177 RIEIQ 181
R +
Sbjct: 174 RAVLV 178
>gi|53804447|ref|YP_113694.1| OmpA family protein [Methylococcus capsulatus str. Bath]
gi|53758208|gb|AAU92499.1| OmpA family protein [Methylococcus capsulatus str. Bath]
Length = 215
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 60/193 (31%), Gaps = 13/193 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M L + + +GC + + A
Sbjct: 20 MRTGLLIVVAASLLTAGCSKKEEVRPDDAAGVGLEGGGGPGGPQIGKYGAGGNGGKAYGG 79
Query: 61 TGIVVSRIGDMITCYIP------------VHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
TG P V + +++P++ A L P+
Sbjct: 80 TGGAYGGGAYGSGGGDPALNDPSSPLYKRVIYFGYDSSEVLPEYVPIVNAHAAYLASHPN 139
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ ++ H D G+ + N+ + ++RA I + + + +S+ + + F + P D
Sbjct: 140 VTVTLEGHCDERGSPEYNIALGEQRARSIANTMRFQ-GASDGQMQIVSFGEEKPADPGSG 198
Query: 169 KVGRQNNQRIEIQ 181
+ N+R+EI
Sbjct: 199 EAAWAKNRRVEIV 211
>gi|87121178|ref|ZP_01077069.1| Thrombospondin type 3 repeat:OmpA/MotB [Marinomonas sp. MED121]
gi|86163670|gb|EAQ64944.1| Thrombospondin type 3 repeat:OmpA/MotB [Marinomonas sp. MED121]
Length = 200
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ ++ ++ +A + PS+ + I+ HTD+ G N +S +RA I
Sbjct: 77 VFFETDSTEIRFQYYKEIKKLADFMKDNPSSKVVIEGHTDNSGRQSYNQSLSYKRAQAIA 136
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI--EIQIFPRGNI 188
LIQ S + + G++ PI +N + G++ N+R+ EI I + +I
Sbjct: 137 DILIQSFKISAKRVKAIGYSESRPIASNASAEGKKKNRRVVAEISIQTKIDI 188
>gi|308273873|emb|CBX30473.1| hypothetical protein N47_K27130 [uncultured Desulfobacterium sp.]
gi|308275118|emb|CBX31717.1| hypothetical protein N47_E52290 [uncultured Desulfobacterium sp.]
Length = 355
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 71/189 (37%), Gaps = 12/189 (6%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L ++ + G + ++ + + + KA + + G+
Sbjct: 165 NLLCTVGVSFLFGGEKDKPKVEETPKVVEPPKAAEEPPKAVEEPPKAVEPPRTDSDGDGV 224
Query: 64 VVSRI-----------GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + K+ P+L + +++ K P +
Sbjct: 225 YDDLDKCPNTPKGATVDCRGCWILQGVYFDTAKWNILSKYFPILDNVVSVIKKNPDMKLE 284
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+Q HTDS GT K N +S+ RA + Y + +GV + ++ +GF + P ND
Sbjct: 285 VQGHTDSRGTAKYNRKLSENRAKSVVEYFVSKGVDRS-ILTAKGFGFTVPAAPNDNAEDM 343
Query: 173 QNNQRIEIQ 181
N+R+E++
Sbjct: 344 AKNRRVELK 352
>gi|215433387|gb|ACJ66659.1| OmpA domain protein [Myxococcus fulvus HW-1]
Length = 620
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 59/168 (35%), Gaps = 9/168 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC ++ + + G D V G I +
Sbjct: 449 GCPDPDNDQDGIPDAEDQCPLEAETINGVKDDD------GCPDKGKARVRVEGARIVI-L 501
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERAD 135
+ + +L+ +A+ L P + ++ HTD G NL +SQ RA
Sbjct: 502 DKVYFATGRDVILARSHSLLRQVASTLKANPRIERVRVEGHTDDQGAEAKNLDLSQRRAK 561
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + + + G+ P+DTN T GR+NN+R+E I
Sbjct: 562 NVVD-FLVKVGIAAERLEAVGYGEAKPVDTNKTAKGRENNRRVEFNIV 608
>gi|149197358|ref|ZP_01874409.1| chemotaxis MotB protein, putative [Lentisphaera araneosa HTCC2155]
gi|149139376|gb|EDM27778.1| chemotaxis MotB protein, putative [Lentisphaera araneosa HTCC2155]
Length = 265
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKF 106
K +E Q ++ I + + I+ + + F S L + +L I+ L++
Sbjct: 105 SKLVEELQNEITSREIKLKELNGRISLSMENKILFPSGTANLGDRGTEVLNKISDALSET 164
Query: 107 PSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+I ++ HTD+ G KNN +S RA + L+ +++ I +
Sbjct: 165 TDHIIRVEGHTDNVPLSGKGLYKNNWELSAARALSVVKELLITQQLNSKDIEAVAMGEFH 224
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
P+ N TK GR N+RIEI + P+
Sbjct: 225 PVADNTTKDGRAQNRRIEIYLSPK 248
>gi|325105244|ref|YP_004274898.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324974092|gb|ADY53076.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 285
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + ++ + ++ + + + L IA I+ + + + I+ +TD++
Sbjct: 143 VDIQVLKGVVYISLADNMLYKSGSYEISDRADQTLSKIAKIIKDYKNYGVLIEGNTDNVP 202
Query: 122 TLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NN +S RA + L + + ++ G P+ N T+ G+ N+R
Sbjct: 203 ISQTNIRNNWDLSVLRASSVVQSLQTKYGVDPKRLTAGGRGEYNPVAPNSTEEGKSKNRR 262
Query: 178 IEIQIFPR 185
+I I P
Sbjct: 263 TQIIITPE 270
>gi|262371750|ref|ZP_06065029.1| outer membrane protein A [Acinetobacter junii SH205]
gi|262311775|gb|EEY92860.1| outer membrane protein A [Acinetobacter junii SH205]
Length = 346
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ + +A L ++P+ I+
Sbjct: 204 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSDIKPQYKSEIAKVAEKLAEYPNATARIE 263
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 264 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 323
Query: 175 NQRI 178
N+R+
Sbjct: 324 NRRV 327
>gi|70671520|gb|AAZ06132.1| outer membrane protein A [Acinetobacter sp. V-26]
Length = 349
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ + +A L ++P+ I+
Sbjct: 210 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSDIKPQYKSEIAKVAEKLAEYPNATARIE 269
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 270 GHTDNTGPRALNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 329
Query: 175 NQRI 178
N+R+
Sbjct: 330 NRRV 333
>gi|299535178|ref|ZP_07048502.1| chemotaxis protein motB [Lysinibacillus fusiformis ZC1]
gi|298729299|gb|EFI69850.1| chemotaxis protein motB [Lysinibacillus fusiformis ZC1]
Length = 250
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 71/218 (32%), Gaps = 40/218 (18%)
Query: 5 LGLSMFIMTTISGCGLASREK----------------------KKVFLHKSNDTDIVNKR 42
L L + + + +EK V ++ +
Sbjct: 26 LTLLLAVFIILFASSSVDQEKLERMSAVFNQVFDGGTSFLEQPAPVPTPNADSDQTPQQN 85
Query: 43 FGSSLDKAE-DEFQMQLQ--------DTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKF 92
D+ E E + + + + + I + F + ++ ++
Sbjct: 86 SAYLKDQQELAEIKDSVDNFIAVNEMEDQFATEMTDEGLLVTIRDSILFDPGQATVKPEY 145
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY------LIQRGV 146
+P+ + ++T+L P+ I I HTD++ S + V+++ +
Sbjct: 146 VPIAKELSTMLESDPARNIVITGHTDNVP--AGPNFTSNFQLSVMRATKFLELLIESNDK 203
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +G I NDT GR N+R+E+ I P
Sbjct: 204 LDPTRFSAKGNGEYRAIAPNDTAEGRAKNRRVEVLIQP 241
>gi|206974802|ref|ZP_03235717.1| putative chemotaxis protein MotB [Bacillus cereus H3081.97]
gi|222095352|ref|YP_002529412.1| flagellar motor protein mots [Bacillus cereus Q1]
gi|206746821|gb|EDZ58213.1| putative chemotaxis protein MotB [Bacillus cereus H3081.97]
gi|221239410|gb|ACM12120.1| chemotaxis protein MotB, putative [Bacillus cereus Q1]
Length = 225
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 58/144 (40%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D + + + + GI V R + + + + ++ + ++ +
Sbjct: 81 MDDLYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISKLVGF 140
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS N +S RA + +LI+ ++ ++ G+A
Sbjct: 141 FQSVPN-SIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNVEDKRLAAVGYA 199
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 200 DTKPVVPNDSPQNWEKNRRVVIYI 223
>gi|170722410|ref|YP_001750098.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169760413|gb|ACA73729.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 383
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 54/109 (49%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++ L+ +L + P +I I H D+ G NL +S+ RA ++
Sbjct: 262 NLFDPGSDELKPGSTKLLVNALVGIKAQPGWLIVISGHADARGDAAKNLDLSRARASAVR 321
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ + G + +V+G A P+ +NDT GR N+R++I++ P+G+
Sbjct: 322 DWMQRMGDIPDSCFAVQGVAASQPVSSNDTVNGRAENRRVDIRLVPQGD 370
>gi|315126277|ref|YP_004068280.1| required for outer membrane integrity, uptake of group A colicins,
and translocation of phage DNA [Pseudoalteromonas sp.
SM9913]
gi|315014791|gb|ADT68129.1| required for outer membrane integrity, uptake of group A colicins,
and translocation of phage DNA [Pseudoalteromonas sp.
SM9913]
Length = 179
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 72/181 (39%), Gaps = 8/181 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +MT ++ C +S + + T ++ D E Q
Sbjct: 6 ILKGLLIAVPVMT-LAACSSSSDIDENAANQSNQAT-----VEQTTTDTVEVATMTPEQQ 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + + + +E K+ +L+ A L K PS + I+ H D
Sbjct: 60 AEEQLRQKYEALR-QEQIIYFDFDKATVESKYADLLRAHAEFLVKNPSVKVLIEGHADER 118
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + R ++ YL S +SV + + P+ T+ N+R +
Sbjct: 119 GTPEYNIALGEHRGQAVEKYLQSL-GVSASQMSVVSYGEEKPMVKTRTEAAFAKNRRAVL 177
Query: 181 Q 181
Sbjct: 178 V 178
>gi|308066932|ref|YP_003868537.1| chemotaxis motB protein (Motility protein B) [Paenibacillus
polymyxa E681]
gi|305856211|gb|ADM67999.1| Chemotaxis motB protein (Motility protein B) [Paenibacillus
polymyxa E681]
Length = 275
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 66/173 (38%), Gaps = 9/173 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV----SRIGDMITCYIP 77
S+ K S + +R L K + + +Q+ G+ + I
Sbjct: 86 SQPVKSKATSTSELQKQLAQREEEDLKKLKKQMDQYIQNNGLTPLLNTKLNQSQLMITIS 145
Query: 78 VHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQE 132
+ F + ++ + + + I+++L +FP + + HTD++ +N +S +
Sbjct: 146 DNALFSSGQAEVKPEARKLAKSISSMLQQFPGYDVIVSGHTDNVPISNSQFPSNFDLSAK 205
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
R+ L+ G+ P+ +N GR N+R+EI + +
Sbjct: 206 RSLNFLRILLLNPDLDPTKFVSIGYGEYRPLASNQDGQGRSKNRRVEISVLRK 258
>gi|126734660|ref|ZP_01750406.1| OmpA domain protein [Roseobacter sp. CCS2]
gi|126715215|gb|EBA12080.1| OmpA domain protein [Roseobacter sp. CCS2]
Length = 632
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L P++ IA IL I + TDS G N +SQ+RAD + +
Sbjct: 499 FDPGSADLTADTQPVVDDIADILKACGDLRIKVSGFTDSQGGEVMNQQLSQDRADAVLTA 558
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFPRGNIKK 190
L R V + F S+ GF + PI NDT+ GR+ N+RIE I P +++
Sbjct: 559 LRARRVPVSTFTSI-GFGEENPIADNDTEEGREANRRIEFSLIVPESTVEE 608
>gi|115372711|ref|ZP_01460017.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca DW4/3-1]
gi|310823482|ref|YP_003955840.1| thrombospondin type 3 repeat protein, outer membrane
domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115370192|gb|EAU69121.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca DW4/3-1]
gi|309396554|gb|ADO74013.1| Thrombospondin type 3 repeat protein, outer membrane domain protein
[Stigmatella aurantiaca DW4/3-1]
Length = 5149
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 11/176 (6%)
Query: 18 CGLASREKKK-VFLHKSNDTDIVNKRFGSSLDK---AEDEFQMQLQDTGI----VVSRIG 69
C +K D D + DK + + G V +
Sbjct: 4963 CPNEPEDKDGFRDEDGCPDPDNDQDGIADASDKCPNQPETINGVTDEDGCPDKGKVKVLV 5022
Query: 70 DMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNL 127
+ I + F S++ + K +L+ +A +L P + ++ +TD G + NL
Sbjct: 5023 EREKIVILDKIFFTSKMDVILPKSFSLLKQVAQVLKAHPEIEKVRVEGYTDDQGPDEENL 5082
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S+ RA + L+Q GV++ R SV GF P+ +N T GR N+R+E +
Sbjct: 5083 RLSERRAKAVLERLVQEGVAAERLDSV-GFGEARPVASNKTSKGRDANRRVEFSVV 5137
>gi|108757340|ref|YP_635150.1| putative chemotaxis MotB protein [Myxococcus xanthus DK 1622]
gi|108461220|gb|ABF86405.1| putative chemotaxis MotB protein [Myxococcus xanthus DK 1622]
Length = 295
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 68/170 (40%), Gaps = 8/170 (4%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+K+ + + + ++ D +D+ + ++ + I +S I + V F
Sbjct: 93 SSEKEQLSQTVQEQEAELAKLKATYDDLQDKMKAEIAEGAIRLSHAEGRIQVDLVDKVLF 152
Query: 83 V-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN-------NLLISQERA 134
+ + + +L + ++L K I + HTD + N +S RA
Sbjct: 153 DSGDASISARGQEVLTRLGSVLAKVEDKSIQVSGHTDDSPPSQKLQSTFPSNWELSVARA 212
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +L G R + G+ P+ TN T +GR N+RIE+ + P
Sbjct: 213 VNVVRFLQDTGGVPARRLVAAGYGQMRPVSTNATPLGRARNRRIEVLLMP 262
>gi|118581870|ref|YP_903120.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118504580|gb|ABL01063.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 271
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 58/142 (40%), Gaps = 6/142 (4%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPS 108
E Q + + ++ + + F + ++ ++ IA ++ ++ +
Sbjct: 115 IEAYLVKQGAQSKVNLTITRRGLIVSLKEAGFFDSGQAQIKPTAYELINTIAEVMTQYSN 174
Query: 109 TVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ ++ HTD++ +N +S RA YLI+ ISV G+A P+
Sbjct: 175 -PLRLEGHTDNVPINTSQFPSNWELSTARAVNGLKYLIRNFGVDPDKISVAGYAEFRPMA 233
Query: 165 TNDTKVGRQNNQRIEIQIFPRG 186
N T GR N+R+++ +
Sbjct: 234 DNATPEGRAKNRRVDLVMLSNE 255
>gi|317491198|ref|ZP_07949634.1| peptidoglycan-associated lipoprotein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920745|gb|EFV42068.1| peptidoglycan-associated lipoprotein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 171
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 63/181 (34%), Gaps = 16/181 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ IM ++ C +N + + + + + QMQ
Sbjct: 6 VLKGLMLALPIM-AVAACSSHKNANDDQSAMGANAGNGMENGSSNLSSEEQARLQMQ--- 61
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ I + + + + ML A L PS + ++ H D
Sbjct: 62 -----ELQKNNIV------YFGLDKYDVSSDYAQMLDAHAAFLRNNPSYKVTVEGHADER 110
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q IS+ + + P + N+R +
Sbjct: 111 GTPEYNIALGERRANAV-KMYLQGKGVGADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 169
Query: 181 Q 181
Sbjct: 170 V 170
>gi|291336864|gb|ADD96396.1| OmpA/MotB domain containing protein [uncultured organism
MedDCM-OCT-S09-C206]
Length = 211
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 65/168 (38%), Gaps = 6/168 (3%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
AS + + S + + + ++ + Q+ + V + D + +
Sbjct: 44 ASPQNGEGPGGSSQEAYQKQQNASRTTEELTTALKQQIDQGLVEVEQRDDKVFITVGSGG 103
Query: 81 SFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERAD 135
+F S L ++ +L I+ P + I + HTD + ++N ++ RA
Sbjct: 104 AFPSGTADLTEEAQRILDRISLA-AMSPKSTITVTGHTDDVPIKNAQFRDNWDLAAGRAS 162
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + G+ +S P+ N T GR N+RIEI+I
Sbjct: 163 SVVQAIQRTGLIDGDRLSAVSKGETAPLADNATAAGRSENRRIEIEIT 210
>gi|221196399|ref|ZP_03569446.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
CGD2M]
gi|221203071|ref|ZP_03576090.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
CGD2]
gi|221177005|gb|EEE09433.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
CGD2]
gi|221182953|gb|EEE15353.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
CGD2M]
Length = 163
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 55/176 (31%), Gaps = 21/176 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ + + GC A++ + + + ++ V LD
Sbjct: 7 FAVIAALALLGGCHHAAKTPENTGMAPTPSSEAVTTVTADDLDNPNSPLAK--------- 57
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
++ + +LQ A L PS + IQ +TD GT +
Sbjct: 58 -----------RSVYFDFDSYTVKPEDQSLLQAHANYLRSHPSRHVLIQGNTDERGTSEY 106
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL + Q R+ + S ++ + + P+ + N+R ++
Sbjct: 107 NLALGQRRSQAVMS-ALETLGVPASQLEAVSLGKEKPVALGHDEAAWAQNRRADLV 161
>gi|209517619|ref|ZP_03266457.1| peptidoglycan-associated lipoprotein [Burkholderia sp. H160]
gi|209501915|gb|EEA01933.1| peptidoglycan-associated lipoprotein [Burkholderia sp. H160]
Length = 168
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 59/183 (32%), Gaps = 20/183 (10%)
Query: 1 MIKELGLSMFIMTT--ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M+ +L + ++ ++ C + + + N ++D
Sbjct: 1 MMSKLRFAFAVVMVGALAACHSGVKLDENANKGAGSAQPNPNDVATVNVDPL-------- 52
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
++ + +LQ A L P + IQ +TD
Sbjct: 53 ---------NDPNSPLAKRSIYFDFDSYSVKDDYQTLLQQHAQYLKSHPQRHVLIQGNTD 103
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + NL + Q+RA+ ++ + ++ + + P+ T + N+R
Sbjct: 104 ERGTSEYNLALGQKRAEAVRR-SLALMGVTDSQMEAVSLGKEKPLATGHDEASWAQNRRA 162
Query: 179 EIQ 181
++
Sbjct: 163 DLV 165
>gi|149371103|ref|ZP_01890698.1| OmpA domain protein [unidentified eubacterium SCB49]
gi|149355889|gb|EDM44447.1| OmpA domain protein [unidentified eubacterium SCB49]
Length = 466
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Query: 17 GCGL-ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
C A K ++ D D V + + + + I V + D I Y
Sbjct: 300 ACPEEAGPAANKGCPNRDKDGDGVLDKDDECPEVPGTVARKGCPEPQITVEIM-DQINEY 358
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ ++ + K+ ++ + I+N++ + I+ H+DS G+ NL +S++RA
Sbjct: 359 SRTILFDTNKSTIRKESHAAIRSMIDIMNEYKTANFLIEGHSDSSGSASYNLELSKKRAA 418
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+K++L +GV ++R ++ GF P +N T GRQ N+R+E+ +
Sbjct: 419 AVKTFLESKGVDASR-LTSEGFGETRPKASNSTAAGRQENRRVEVSL 464
>gi|90020235|ref|YP_526062.1| OmpA domain-containing protein [Saccharophagus degradans 2-40]
gi|89949835|gb|ABD79850.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 381
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
+ T+ C K + D+D A ++ G +S +
Sbjct: 203 VANTLDACPATPANVKVDAKGCALDSDNDGVADYQD-SCANTAATHKVDAKGCSLSLT-E 260
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ + + + +++ + ++ +A +N++ +T ++++ +TD G+ N +S
Sbjct: 261 TVAINLSIQ-FDNNSAVVKESYYAEVKRVADFMNQYANTQVSVEGYTDDRGSAAYNKQLS 319
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
Q+RAD +K+ L+ + ++ GF PIDTNDT GR N+R+
Sbjct: 320 QKRADAVKATLVSQFNIDAARVTATGFGEINPIDTNDTAAGRAANRRV 367
>gi|157804141|ref|YP_001492690.1| guanylate kinase [Rickettsia canadensis str. McKiel]
gi|157785404|gb|ABV73905.1| guanylate kinase [Rickettsia canadensis str. McKiel]
Length = 155
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 56/182 (30%), Gaps = 29/182 (15%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ L+ + ++GC + + +
Sbjct: 1 MKTKITLAFLALFVLAGCNTTKKAPQFDSGV----------------------------N 32
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G +S + D L K L+ A L K P ++ H D
Sbjct: 33 QGEEISLMKDFEKHAGNAVWFDFDSSDLSPKAKEELERQACWLLKHPEVKATVEGHCDER 92
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + NL + + RA K +L + N +++ + P +T+ N+R
Sbjct: 93 GTREYNLGLGERRAAAAKKFLAHK-GIDNNRLNIISYGKDRPAMMGNTEEAFAYNRRAVT 151
Query: 181 QI 182
I
Sbjct: 152 VI 153
>gi|326794907|ref|YP_004312727.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326545671|gb|ADZ90891.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 209
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 11/197 (5%)
Query: 1 MIK-----ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M K ++ ++ + + S E S D + D +
Sbjct: 1 MFKLSSRHKIATALLLAGFGAA---VSAESLYNPNIASRLADGDRDGVIDARDHCANTPA 57
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
D + S + + + ++ ++ ++ +A + K P + I I+
Sbjct: 58 GSRVDN-VGCSAESSKLLSVELNILFDSGKDIVKPRYYSEVKKLADFMRKNPQSSIVIEG 116
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD +G+ + NL +SQ RA I S L + + G+ PI TNDT GR+ N
Sbjct: 117 HTDDVGSEELNLGLSQRRASAIASVLTDSFMVRKSRVKGVGYGETRPIATNDTATGREQN 176
Query: 176 QRIEIQIFPR--GNIKK 190
+R+ +IF R ++K+
Sbjct: 177 RRVVAEIFARQTADVKR 193
>gi|229155299|ref|ZP_04283410.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342]
gi|228628224|gb|EEK84940.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342]
Length = 213
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 60/144 (41%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D+ + + + + GI V R + I + + ++ + ++ +
Sbjct: 69 MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIIDNLIFDTGDANVKPEAKEIISQLVGF 128
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS + N +S RA + +LI+ ++ ++ G+A
Sbjct: 129 FQSVPN-PIVVEGHTDSRPIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 187
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 188 DTKPVVPNDSPQNWEKNRRVVIYI 211
>gi|188532760|ref|YP_001906557.1| hypothetical protein ETA_06130 [Erwinia tasmaniensis Et1/99]
gi|188027802|emb|CAO95659.1| OmpA family protein [Erwinia tasmaniensis Et1/99]
Length = 413
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 57/146 (39%), Gaps = 8/146 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPS 108
+ + +++ + V D + F S + ++ +L +A +N
Sbjct: 260 LKTFLKPEIEQGLVAVRDEADRSVVTLKGDGLFTSASTEVRGRYAEVLDRVAAAMNNVSG 319
Query: 109 TVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I + ++D++ +N +S RA + L + +S + + G P+
Sbjct: 320 -RILVVGYSDNVPIRSARFASNYELSLARAQSVSGQLR-QHLSQPQRVKAEGRGESSPLA 377
Query: 165 TNDTKVGRQNNQRIEIQIF-PRGNIK 189
N++ R N+R+EI + GN +
Sbjct: 378 PNNSAENRARNRRVEITLLVSPGNTR 403
>gi|159025742|emb|CAO02045.1| outer membrane protein A [Bordetella hinzii]
gi|159025744|emb|CAO02046.1| outer membrane protein A [Bordetella hinzii]
gi|159025746|emb|CAO02047.1| outer membrane protein A [Bordetella hinzii]
Length = 177
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + +L +A I HTDSIGT N +S+ RA +
Sbjct: 68 DTFFDFDKSVLKPEGRQLLDQVAQQAGTIDLETIIAVGHTDSIGTEAYNQKLSERRAASV 127
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + I G PI TN T GR N+R+EI+I
Sbjct: 128 KAYLVSK-GIDPNRIYTEGKGELQPIATNKTAEGRARNRRVEIEIV 172
>gi|119773836|ref|YP_926576.1| Outer membrane protein-related peptidoglycan-associated
(lipo)protein [Shewanella amazonensis SB2B]
gi|119766336|gb|ABL98906.1| Outer membrane protein-related peptidoglycan-associated
(lipo)protein [Shewanella amazonensis SB2B]
Length = 481
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 49/108 (45%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + + + P+L+++AT L + P+ + HTD G N +S RA
Sbjct: 369 TLDGLLFDFDSDRMLPESQPVLEVLATYLKQHPAKGFYVVGHTDDKGERAYNQSLSLRRA 428
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
D + L Q+ ++ G P+ +N+ + G+ N+R+E+ +
Sbjct: 429 DAVIQSLTQQYHIPASQLTAHGNGEYSPVASNENESGQALNRRVELVL 476
>gi|296390172|ref|ZP_06879647.1| flagellar motor protein MotD [Pseudomonas aeruginosa PAb1]
Length = 296
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 7/175 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ ++ + +D D D F + + V I + +
Sbjct: 76 TTEPERTSVEEQPSDNAASVDSLERIADSVRDAFGDLIASDQLSVRGNELWIEITLNSSL 135
Query: 81 SFVSEVFLEKKFL-PMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERAD 135
F S L +++ +A IL + + I ++ TD N +S RA
Sbjct: 136 LFPSGDALPNDAAFDIVEKVAKILAPYKN-PIHVEGFTDDVPIHSPRYPTNWELSAARAA 194
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
I L+ ++ G+ P+ N + GR N+R+ + I +++
Sbjct: 195 SIVR-LLGNDGVEPSRMAAVGYGEFQPVADNASAEGRAKNRRVVLVISRNLEVRR 248
>gi|317153134|ref|YP_004121182.1| peptidoglycan-associated lipoprotein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943385|gb|ADU62436.1| peptidoglycan-associated lipoprotein [Desulfovibrio aespoeensis
Aspo-2]
Length = 183
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 9/180 (5%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV--NKRFGSSLDKAEDEFQMQLQDTG 62
L L + + +GC + + SS+D+A + + +
Sbjct: 10 LILLVLALGVGAGCAKKKTTTTPPGAQVEVTDESQWKSSSSDSSMDEATLASEAERRAKT 69
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V+ L + +L L A I+ ++ + ++ H D GT
Sbjct: 70 EAVTE------LTSVTINFAFDSYELNSEARSILALKANIMRRYTDVRVVVEGHCDERGT 123
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ NL + + RA +L+ GV R S+ F + P+D+ + N+R E +
Sbjct: 124 EEYNLALGERRARAAYEHLVILGVDPGRM-SIVSFGEEKPLDSAHNETAWAKNRRAEFVV 182
>gi|152984892|ref|YP_001347626.1| outer membrane protein [Pseudomonas aeruginosa PA7]
gi|150960050|gb|ABR82075.1| probable outer membrane protein [Pseudomonas aeruginosa PA7]
Length = 269
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
S+ + ++ + + + + + L+ + L
Sbjct: 125 SVQEQGQRLSEEIAS--LSTEETERGLVLTLGDVLFDFNRAELKPAANRTALKLVQFLQL 182
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P VI I+ +TDS+G + NL +S+ RA + L GV R V G+ +P+
Sbjct: 183 NPRRVIRIEGYTDSVGDRQANLDLSRARAQAVADVLADLGVDPARM-QVAGYGEAFPVTD 241
Query: 166 NDTKVGRQNNQRIEIQ 181
N + GR N+R+EI
Sbjct: 242 NASNRGRAQNRRVEIV 257
>gi|87121179|ref|ZP_01077070.1| OmpA family protein [Marinomonas sp. MED121]
gi|86163671|gb|EAQ64945.1| OmpA family protein [Marinomonas sp. MED121]
Length = 201
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 56/111 (50%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + +++ ++ +A L K PS+ + I+ HTD+ G +N +SQ+RA I
Sbjct: 77 NILFVSNRFEVRRRYYSEVKKLADFLRKNPSSNVVIEGHTDNTGHNHHNQQLSQQRAQAI 136
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ LI+ + + G+ PI +N + G+ N+R+ ++F R +
Sbjct: 137 ANILIKTFSIAQSRVKAIGYGETRPIASNLSAQGKAKNRRVVAEVFARDTV 187
>gi|302381938|ref|YP_003817761.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302192566|gb|ADL00138.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 356
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 69/176 (39%), Gaps = 3/176 (1%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ T + ++ V +++ G+ + + L+ +
Sbjct: 159 AFGGGTALGASQMSGMRPVAVSTLRTSAGTGSLAG-GAGVATSSLATVQALKSDLGAIET 217
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNN 126
+ + + P L +A ++ T IAI+ HTDS GT N
Sbjct: 218 DRGTVVALSGDVTFDFDQATIRPDARPTLDRLAELIQATGGTGRIAIEGHTDSEGTDAYN 277
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S+ RA+ +K+YL+ RG S +R + G P ND GR+ N+R+E+ +
Sbjct: 278 HDLSERRAEAVKAYLVPRGTSGDR-LEAMGIGEARPAVANDDDAGRRRNRRVEVIL 332
>gi|213971390|ref|ZP_03399504.1| OmpA family protein [Pseudomonas syringae pv. tomato T1]
gi|213923833|gb|EEB57414.1| OmpA family protein [Pseudomonas syringae pv. tomato T1]
Length = 417
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 177 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 236
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 237 TRLAKVVEGDQKTAVLILGHADTSGPTEGNQKISQERAQSVAAIFRL-SGLERNRLSQRG 295
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 296 MGAVMPRAANDSLEGRALNRRVEILMTPQDTMR 328
>gi|238897411|ref|YP_002923088.1| pal protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|229465166|gb|ACQ66940.1| pal protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 173
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 75/182 (41%), Gaps = 17/182 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS-LDKAEDEFQMQLQ 59
++K L L++FI + ++ C S + + TDI G+S + A++ + Q++
Sbjct: 7 ILKRLTLALFIFSVMA-C--TSHKNTNHSEMGAETTDISTDMNGNSGVSSADERARAQIE 63
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
V + ++ F +L A L PS + I+ HTD
Sbjct: 64 G------------LQKTSVVYFDFDKYNIKPNFAEILNAHADFLLNNPSFKVDIEGHTDQ 111
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N+ + + RA+ + +Q S + +S+ + + P+ + K N+R
Sbjct: 112 SGTSEYNMALGERRANAV-KMYLQGKGVSAQQMSIVSYGKEKPVYRGNNKEDYSQNRRAV 170
Query: 180 IQ 181
+
Sbjct: 171 LI 172
>gi|332558675|ref|ZP_08412997.1| MotB [Rhodobacter sphaeroides WS8N]
gi|332276387|gb|EGJ21702.1| MotB [Rhodobacter sphaeroides WS8N]
Length = 366
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 8/153 (5%)
Query: 37 DIVNKRFGSSLD--KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ + + LD + + ++ + + V + + + SF L
Sbjct: 211 AALRQSVRAELDALRLRNALDREVAEGLVKVEQTDGKVFVSLGAGGSFPSGSDDLTPDAR 270
Query: 94 PMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
++ IA + P I + HTD S G ++N+ ++ RA + L+ G
Sbjct: 271 AVMARIAEA-TRNPERTITVTGHTDNVPVSGGAFRDNIALAAGRAASVVRELVASGSVDP 329
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I+ P+ N T+ GR N+RIEI+I
Sbjct: 330 GRITAVSRGEFDPVADNATEEGRAQNRRIEIEI 362
>gi|322806477|emb|CBZ04046.1| flagellar motor rotation protein MotB [Clostridium botulinum H04402
065]
Length = 254
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 74/216 (34%), Gaps = 36/216 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHK-----------SNDTDIVNKRFGSS------- 46
L L + + + K + + + G +
Sbjct: 23 LTLLLALFIVMFAMSKVDTAKLQKASQEFNVIFKAGSNVLQEGGSGGDSVGKAGVSIVPS 82
Query: 47 --------LDKAEDEFQMQLQDTG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ + + + + +++ G + V D + I V F + + K+
Sbjct: 83 DSVIEDIKMKEIKSKLEKEIKKNGYSDKVKVGVDADGLEIDIQDVVLFNSGDAEVLKQSS 142
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSN 149
+L I+ +L I + HTD+ ++N +S RA + ++L G
Sbjct: 143 ALLTQISKMLKGL-DNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPA 201
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S++ + P N T+ GR N+R+EI I +
Sbjct: 202 NKLSIQAYGEYMPKFDNATEAGRAKNRRVEISIVRK 237
>gi|322418609|ref|YP_004197832.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320124996|gb|ADW12556.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 426
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++ ++ L+ + LN+FP I HTDS T N +S+ RA ++ Y
Sbjct: 314 FDTDKWNIKPRYHAELKTVGDFLNQFPDAYGEISGHTDSTHTDDYNQRLSERRAKAVRDY 373
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+++ + ++ +G+ K P+ TN T VGR N+RIE
Sbjct: 374 IVKNFKIDPKRLTGKGYGEKRPMATNKTAVGRAKNRRIE 412
>gi|83643990|ref|YP_432425.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83632033|gb|ABC28000.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 327
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 47/108 (43%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + ++ + L IA ++ PS + I HTD+ G L N +S+ R
Sbjct: 218 IALYGVYFDTDKADIKPESAETLAEIAKLMKSQPSLKVLIVGHTDNAGALDYNRSLSERR 277
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
A + L+ + ++ G P+ +N+ + G+ N+R+E+
Sbjct: 278 AKAVMDALVSQYKIGAERMTALGVGMAAPVASNENEAGKAKNRRVELV 325
>gi|225628264|ref|ZP_03786298.1| peptidoglycan-associated lipoprotein [Brucella ceti str. Cudo]
gi|225616110|gb|EEH13158.1| peptidoglycan-associated lipoprotein [Brucella ceti str. Cudo]
Length = 183
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 26/173 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++F+ ++GC
Sbjct: 27 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFT----------------- 69
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + + L A L ++P I I+ H D GT +
Sbjct: 70 -VNVGDRI-------FFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADERGTRE 121
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + Q RA + +L RGV +NR ++ + + P+ D N+R
Sbjct: 122 YNLALGQRRAAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADTCWSQNRR 173
>gi|29829787|ref|NP_824421.1| secreted protein [Streptomyces avermitilis MA-4680]
gi|29606896|dbj|BAC70956.1| putative secreted protein [Streptomyces avermitilis MA-4680]
Length = 226
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 69/170 (40%), Gaps = 2/170 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + S + + + + + ++ +T +
Sbjct: 47 GSVTTSPPPDVDANSPGLKLADGATLAPAKVLDIKSVVEDLGGEERREDTNADVTFALQA 106
Query: 79 HVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V F + L + + IA + K +T + + TD++G+ + L +S++RA+ +
Sbjct: 107 EVLFPKDSPKLNPEARSRINAIADEIKKQNATNVRVFGFTDNLGSYAHGLTLSKKRAEAV 166
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
L S + VRG++ YPI N ++ GR+ N+R+E+ FPR
Sbjct: 167 HDQLASALGSQDVTFEVRGYSEDYPIADNTSEQGRRKNRRVEVT-FPRDT 215
>gi|329943863|ref|ZP_08292134.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328531569|gb|EGF58405.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 384
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 49/157 (31%), Gaps = 9/157 (5%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ +D I V+ L
Sbjct: 178 PGAATELAAPVAIERYTRALDDSTSTHTGGQDITVTL--------ASDVTFASDSADLTP 229
Query: 91 KFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
LQ +A LN++P ++I HTD I N +S++RA+ +K L Q
Sbjct: 230 AADTQLQTVADQLNQYPDGGTLSIVGHTDDIQDDAYNQPLSEKRANAVKDRLQQLTTLDK 289
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ G P T R N+R+EI + P G
Sbjct: 290 WSPTTTGKGESEPRVKETTDEARAANRRVEITLTPTG 326
>gi|262198644|ref|YP_003269853.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262081991|gb|ACY17960.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 637
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 70/170 (41%), Gaps = 11/170 (6%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC ++ ++ L + + + + + + D ++ T + + +
Sbjct: 475 GCPDHDNDRDRI-LDEDDQCPLEPETYNGNRDDDGCPDSGRVVVTDVSIDI--------L 525
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERAD 135
+ ++++ P+L +A + P I +Q HTD+ G+ NL +S ERA
Sbjct: 526 DKVYFEFNSANIKRESFPILDAVAATIMGNPDIRLIEVQGHTDARGSASYNLRLSDERAK 585
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + + + +G+ PID+++T+ N+R+E I R
Sbjct: 586 SV-RAYLLKKGVEPDRVDAKGYGETKPIDSSNTEKAHATNRRVEFLIMNR 634
>gi|59711570|ref|YP_204346.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
fischeri ES114]
gi|197335447|ref|YP_002155724.1| peptidoglycan-associated lipoprotein [Vibrio fischeri MJ11]
gi|59479671|gb|AAW85458.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
fischeri ES114]
gi|197316937|gb|ACH66384.1| peptidoglycan-associated lipoprotein [Vibrio fischeri MJ11]
Length = 188
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 64/184 (34%), Gaps = 5/184 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHK---SNDTDIVNKRFGSSLDKAEDEFQMQ 57
++K L +++ ++ +S C + + + +T N G + +
Sbjct: 6 LLKSLLIALPVV-ALSACSSSDSATDSTAGQESTNAAETQTTNGAEGQTDTAVLSSIEAD 64
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
V + + + ++ ML A L+ PS + ++ H
Sbjct: 65 EAMNEAEVRAQAEQELRKVQTVYFAFDNSTISSEYEDMLAAHAAFLSADPSIKVTVEGHA 124
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + N+ + + RA + YL S IS+ + + P+ T N+R
Sbjct: 125 DERGTPEYNIALGERRAKAVSKYLQAL-GVSADQISIVSYGEEKPLVLGQTAEDYAKNRR 183
Query: 178 IEIQ 181
+
Sbjct: 184 AVLV 187
>gi|254787334|ref|YP_003074763.1| peptidoglycan-associated lipoprotein [Teredinibacter turnerae
T7901]
gi|237684812|gb|ACR12076.1| peptidoglycan-associated lipoprotein [Teredinibacter turnerae
T7901]
Length = 166
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 19/182 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L + + ++GC ++++ + S D + + D E
Sbjct: 4 ILKSLITLVAVFGLLAGCSSSTKKDETD----SAANDSASTDTSAYEDTTE--------- 50
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
D + V + L L + A +L P + ++ H D
Sbjct: 51 ----TVDPYDALNGVATVFYFDFDQSILRADARSALMVYAEVLKAAPK-SVRLEGHADER 105
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ ++ +LI + + I + + P ++ N+R+EI
Sbjct: 106 GTREYNMALGERRANAVRDFLILQ-GVDSSLIETVSYGEERPAQMGSSESSWAMNRRVEI 164
Query: 181 QI 182
+
Sbjct: 165 VL 166
>gi|91793918|ref|YP_563569.1| flagellar motor protein MotB [Shewanella denitrificans OS217]
gi|91715920|gb|ABE55846.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 318
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G AS ++ K +++ + + K ++ ++ D I + +G I I
Sbjct: 126 GEASATAQETAEAKKSESSSSQENINEQVKKMAEQLNEEIVDGAIEIESLGQQIIIRIRE 185
Query: 79 HVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQER 133
SF S FL+ KF P+++ I ++L P I + HTD + +N +S R
Sbjct: 186 KGSFASGSGFLQPKFKPVIRSIGSLLKDVPGI-ITVAGHTDGMHISNELYSSNWDLSSAR 244
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + ++ + V G A + +N++ R N+R+EI I +G K+
Sbjct: 245 AVAVAHEFMRVPGFDETRMKVVGMASNDQLVSNESSENRSQNRRVEITI-EQGKAKE 300
>gi|293395553|ref|ZP_06639836.1| OmpA family protein [Serratia odorifera DSM 4582]
gi|291421872|gb|EFE95118.1| OmpA family protein [Serratia odorifera DSM 4582]
Length = 406
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 59/149 (39%), Gaps = 7/149 (4%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQL 98
++ + + ++ + +VV + F S + ++P++
Sbjct: 241 PAPAAPAMLNLKTFLRKEIAEGLVVVRDEAQQSVVILKGDGLFDSAATTVRPAYIPVIDR 300
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISV 154
IA +N I + ++D++ +N +S RA+ + L ++ + R +
Sbjct: 301 IAKAMNGVSG-KILVTGYSDNLPIRSARFPSNWELSLARAEAVSERLQKQLDNPQR-VKA 358
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
G P+ ND+K R N+R+EI +
Sbjct: 359 EGRGDSNPVAPNDSKENRALNRRVEITLL 387
>gi|258404319|ref|YP_003197061.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM
5692]
gi|257796546|gb|ACV67483.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692]
Length = 428
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 67/175 (38%), Gaps = 9/175 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRF---GSSLDKAEDEFQMQLQD-----TGIVVSRI 68
GC + S + G LD D + G+ V
Sbjct: 253 GCAIDSDGDGVIDAKDECPGTPQGVAVDSKGCPLDSDGDGVIDAKDECPGTPQGVQVDEK 312
Query: 69 GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G + + + + F + + + L +LNK P I+ HTDS + N+
Sbjct: 313 GCPVPMDVSISILFDIDKSVVRGDYHDELADATAMLNKNPEANAVIEGHTDSTASAAYNM 372
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S++RA ++ YL+ + +S + + P TN T+ GR+ N+R+ I +
Sbjct: 373 ELSKKRAQSVRDYLVDTFDIDPQRLSTKAYGESQPTATNTTRFGRKLNRRVVITL 427
>gi|30261729|ref|NP_844106.1| flagellar motor protein MotS [Bacillus anthracis str. Ames]
gi|47526945|ref|YP_018294.1| flagellar motor protein MotS [Bacillus anthracis str. 'Ames
Ancestor']
gi|49184555|ref|YP_027807.1| flagellar motor protein MotS [Bacillus anthracis str. Sterne]
gi|165869455|ref|ZP_02214114.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0488]
gi|167633407|ref|ZP_02391732.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0442]
gi|167639130|ref|ZP_02397403.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0193]
gi|170686155|ref|ZP_02877377.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0465]
gi|170706447|ref|ZP_02896907.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0389]
gi|177650324|ref|ZP_02933291.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0174]
gi|190566282|ref|ZP_03019200.1| putative chemotaxis protein MotB [Bacillus anthracis
Tsiankovskii-I]
gi|218902843|ref|YP_002450677.1| putative chemotaxis protein MotB [Bacillus cereus AH820]
gi|225863587|ref|YP_002748965.1| putative chemotaxis protein MotB [Bacillus cereus 03BB102]
gi|227815517|ref|YP_002815526.1| putative chemotaxis protein MotB [Bacillus anthracis str. CDC 684]
gi|229604338|ref|YP_002866130.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0248]
gi|254683216|ref|ZP_05147077.1| flagellar motor protein MotS [Bacillus anthracis str. CNEVA-9066]
gi|254723805|ref|ZP_05185591.1| flagellar motor protein MotS [Bacillus anthracis str. A1055]
gi|254734568|ref|ZP_05192280.1| flagellar motor protein MotS [Bacillus anthracis str. Western North
America USA6153]
gi|254740977|ref|ZP_05198665.1| flagellar motor protein MotS [Bacillus anthracis str. Kruger B]
gi|254755218|ref|ZP_05207252.1| flagellar motor protein MotS [Bacillus anthracis str. Vollum]
gi|254759755|ref|ZP_05211779.1| flagellar motor protein MotS [Bacillus anthracis str. Australia 94]
gi|30255957|gb|AAP25592.1| putative chemotaxis protein MotB [Bacillus anthracis str. Ames]
gi|47502093|gb|AAT30769.1| putative chemotaxis protein MotB [Bacillus anthracis str. 'Ames
Ancestor']
gi|49178482|gb|AAT53858.1| chemotaxis protein MotB, putative [Bacillus anthracis str. Sterne]
gi|164714895|gb|EDR20413.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0488]
gi|167512920|gb|EDR88293.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0193]
gi|167531445|gb|EDR94123.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0442]
gi|170128545|gb|EDS97412.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0389]
gi|170669852|gb|EDT20593.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0465]
gi|172083468|gb|EDT68528.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0174]
gi|190562417|gb|EDV16384.1| putative chemotaxis protein MotB [Bacillus anthracis
Tsiankovskii-I]
gi|218535723|gb|ACK88121.1| putative chemotaxis protein MotB [Bacillus cereus AH820]
gi|225787259|gb|ACO27476.1| putative chemotaxis protein MotB [Bacillus cereus 03BB102]
gi|227002562|gb|ACP12305.1| putative chemotaxis protein MotB [Bacillus anthracis str. CDC 684]
gi|229268746|gb|ACQ50383.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0248]
Length = 225
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 60/144 (41%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D+ + + + + GI V R + + + + ++ + ++ +
Sbjct: 81 MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGF 140
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS + N +S RA + +LI+ ++ ++ G+A
Sbjct: 141 FQSVPN-PIVVEGHTDSRPIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 199
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 200 DTKPVVPNDSPQNWEKNRRVVIYI 223
>gi|42522223|ref|NP_967603.1| peptidoglycan-associated lipoprotein [Bdellovibrio bacteriovorus
HD100]
gi|39574754|emb|CAE78596.1| peptidoglycan-associated lipoprotein [Bdellovibrio bacteriovorus
HD100]
Length = 168
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 71/181 (39%), Gaps = 16/181 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+++L L + + ++GC ++ + ++ T + S+ + +
Sbjct: 1 MVRKLALGLVAIAFVAGC--KGKQTQSDQSIETLPTGGQSTAIDSTPLNFDPMGSDSGKI 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+G + + L+ + + PS + I+ H DS
Sbjct: 59 SG-------------LVTVHFGYDKSSLDASSKKDIATNVEWMKANPSVRVQIEGHCDSR 105
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT++ N+ + + RA+ +K+Y++ + +S + + P++T DT+ N+R
Sbjct: 106 GTIEYNVALGERRANAVKAYMVSL-GIAADRLSTISYGKEKPLETGDTEAAWAKNRRANF 164
Query: 181 Q 181
Sbjct: 165 V 165
>gi|302037673|ref|YP_003797995.1| flagellar motor protein MotB [Candidatus Nitrospira defluvii]
gi|300605737|emb|CBK42070.1| Flagellar motor protein MotB [Candidatus Nitrospira defluvii]
Length = 259
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 7/172 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + K + S+ + V +R + K +++ D I + I +P
Sbjct: 69 AVGDAKPKMINPDMSSANEPVIRRMKEIMKKIHPSLALEMPDIKI-IETGNGTIMISLPE 127
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F E + + LP L+ +A IL + + I HTD++ +N +S R
Sbjct: 128 SILFTSGEARVRPEALPFLKSLAQILIEM-DRHVRILGHTDNVPIRTAQFPSNWELSAVR 186
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
A ++ + +S GFA P+ TNDT GR N+R+EI I +
Sbjct: 187 AVMVVRIFSELYEVPISHLSATGFADSKPVATNDTPEGRTKNRRVEIIILEK 238
>gi|271499765|ref|YP_003332790.1| peptidoglycan-associated lipoprotein [Dickeya dadantii Ech586]
gi|270343320|gb|ACZ76085.1| peptidoglycan-associated lipoprotein [Dickeya dadantii Ech586]
Length = 168
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 19/181 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + ++ C S + + G+ + QMQ
Sbjct: 6 VLKGLMLALPV-LAVAACSSNKHANNDQ---SSLNGGAGMENSGNMSSAEQARLQMQELQ 61
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + F ML A L PS + I+ H D
Sbjct: 62 --------------RNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTIEGHADER 107
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S ISV + + P + N+R +
Sbjct: 108 GTPEYNIALGERRANAV-QMYLQGKGVSADQISVVSYGKEKPAVLGHDEAAWSKNRRAVL 166
Query: 181 Q 181
Sbjct: 167 V 167
>gi|33592100|ref|NP_879744.1| outer membrane protein A precursor [Bordetella pertussis Tohama I]
gi|33571744|emb|CAE41245.1| outer membrane protein A precursor [Bordetella pertussis Tohama I]
gi|332381516|gb|AEE66363.1| outer membrane protein A precursor [Bordetella pertussis CS]
Length = 193
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + +L +A I HTDSIGT N +S+ RA +
Sbjct: 84 DTFFDFDKSTLKPEGRQLLDQVAQQAGTIDLETIIAVGHTDSIGTEAYNQKLSERRAAAV 143
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + I G PI +N T+ GR N+R+EI+I
Sbjct: 144 KTYLVSK-GIDPNRIYTEGKGELQPIASNKTREGRAQNRRVEIEIV 188
>gi|238764428|ref|ZP_04625377.1| hypothetical protein ykris0001_27500 [Yersinia kristensenii ATCC
33638]
gi|238697344|gb|EEP90112.1| hypothetical protein ykris0001_27500 [Yersinia kristensenii ATCC
33638]
Length = 538
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V + + + + L+ ML + P +I + HTD G
Sbjct: 406 VEKQTPKTVRLDALSLFDTGKYQLKPGSTKMLVSALIDIRAKPGWLIVVAGHTDITGDAG 465
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +S +RA+ ++ +++ S +V+G+ PI TN++ GR N+R+EI + P
Sbjct: 466 ANQTLSLKRAEALRDWMLSTSDVSPTCFAVQGYGATRPIATNESTEGRALNRRVEISLVP 525
Query: 185 RGN 187
+ +
Sbjct: 526 QAD 528
>gi|146279022|ref|YP_001169181.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145557263|gb|ABP71876.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 316
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 57/119 (47%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V+R+ + + LE + P L +A L + P+ + I HTD+ G L+
Sbjct: 196 VARLEQSGSVVLEDLAFASGSADLEDRTYPALAELAEWLKQDPARQVVIVGHTDASGGLE 255
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N+ +S+ RA ++ L+ R + +S G Y P +N T+ GR N+R+E+ +
Sbjct: 256 GNVSLSRARAASVRQRLVSRHGVPDAQVSAEGVGYLAPRASNRTEEGRSRNRRVEVMLL 314
>gi|77463800|ref|YP_353304.1| flagellar MotB protein [Rhodobacter sphaeroides 2.4.1]
gi|77388218|gb|ABA79403.1| flagellar MotB protein [Rhodobacter sphaeroides 2.4.1]
Length = 366
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 8/153 (5%)
Query: 37 DIVNKRFGSSLD--KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ + + LD + + ++ + + V + + + SF L
Sbjct: 211 AALRQSVRAELDALRLRNALDREVAEGLVKVEQTDGKVFVSLGAGGSFPSGSDDLTPDAR 270
Query: 94 PMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
++ IA + P I + HTD S G ++N+ ++ RA + L+ G
Sbjct: 271 AVMARIAEA-TRNPERTITVTGHTDNVPVSGGAFRDNIALAAGRAASVVRELVASGSVDP 329
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I+ P+ N T+ GR N+RIEI+I
Sbjct: 330 GRITAVSRGEFDPVADNATEEGRAQNRRIEIEI 362
>gi|126462636|ref|YP_001043750.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126104300|gb|ABN76978.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 366
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 8/153 (5%)
Query: 37 DIVNKRFGSSLD--KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ + + LD + + ++ + + V + + + SF L
Sbjct: 211 AALRQSVRAELDALRLRNALDREVAEGLVKVEQTDGKVFVSLGAGGSFPSGSDDLTPDAR 270
Query: 94 PMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
++ IA + P I + HTD S G ++N+ ++ RA + L+ G
Sbjct: 271 AVMARIAEA-TRNPERTITVTGHTDNVPVSGGAFRDNIALAAGRAASVVRELVASGSVDP 329
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I+ P+ N T+ GR N+RIEI+I
Sbjct: 330 GRITAVSRGEFDPVADNATEEGRAQNRRIEIEI 362
>gi|325524318|gb|EGD02423.1| OOP family OmpA-OmpF porin [Burkholderia sp. TJI49]
Length = 254
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 13/147 (8%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV------------SFVSEVFLEKKFLPM 95
+ + + +T I + + L + +
Sbjct: 107 EAQRQQLASDMANTLNPTYTIRNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGKQI 166
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +A L K P+ + I HTD+ G +N+ +SQ RAD +K YLI + + + ++
Sbjct: 167 LDQMAAALAKMPNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKS-IAPQQMTTT 225
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI NDT GR N+RIE ++
Sbjct: 226 GVGPDQPIAPNDTAEGRARNRRIEFRV 252
>gi|323345464|ref|ZP_08085687.1| lipoprotein PG3 [Prevotella oralis ATCC 33269]
gi|323093578|gb|EFZ36156.1| lipoprotein PG3 [Prevotella oralis ATCC 33269]
Length = 229
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 75/209 (35%), Gaps = 29/209 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS--------------- 46
+K L M + C + +
Sbjct: 4 MKITTLFMCFVLMFDSCATKQGSGALLGAGGGAVIGGIIGAIAGHGKGAAVGAAIGGAVG 63
Query: 47 ----------LDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSF-VSEVFLEKKF 92
+DK E Q+++ + + + + F ++ L +
Sbjct: 64 AGAGAIIGKHMDKVAAETAAQVKNAKVEQVTDANGLKAVKVTFDSGILFATNKAELNQSS 123
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L +T+L K + I HTDS G N+ +S +RA + +YL GVS+++F
Sbjct: 124 KNELAKFSTVLKKNADCYVDIYGHTDSTGNDGINIPLSNQRAQSVVAYLENCGVSASQFK 183
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+V G P+ +NDTK GRQ N+R+E+
Sbjct: 184 NVVGKGSSDPVASNDTKSGRQLNRRVEVY 212
>gi|163855060|ref|YP_001629358.1| putative lipoprotein [Bordetella petrii DSM 12804]
gi|163258788|emb|CAP41087.1| putative lipoprotein [Bordetella petrii]
Length = 215
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 65 VSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + IP +V + L+ LP+L +A LN+ P + HTDS G+
Sbjct: 93 VEMPDGSLKVNIPSNVSFDTDKAVLKPALLPVLDSVARALNQHPELRAKVVGHTDSTGSA 152
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S+ RA + + + + +++ G A + PI N T GR N+R+E+ +
Sbjct: 153 AHNQTLSENRARSVTD-YLGKQGVAPARMTIEGRAARDPIGDNATAEGRAANRRVEVYL 210
>gi|49480957|ref|YP_035848.1| flagellar motor protein MotS [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52143729|ref|YP_083099.1| flagellar motor protein MotS [Bacillus cereus E33L]
gi|196033392|ref|ZP_03100804.1| putative chemotaxis protein MotB [Bacillus cereus W]
gi|196039124|ref|ZP_03106431.1| putative chemotaxis protein MotB [Bacillus cereus NVH0597-99]
gi|196045046|ref|ZP_03112279.1| putative chemotaxis protein MotB [Bacillus cereus 03BB108]
gi|49332513|gb|AAT63159.1| chemotaxis motB protein, OmpA family [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|51977198|gb|AAU18748.1| chemotaxis motB protein, OmpA family [Bacillus cereus E33L]
gi|195993826|gb|EDX57782.1| putative chemotaxis protein MotB [Bacillus cereus W]
gi|196024048|gb|EDX62722.1| putative chemotaxis protein MotB [Bacillus cereus 03BB108]
gi|196030269|gb|EDX68869.1| putative chemotaxis protein MotB [Bacillus cereus NVH0597-99]
Length = 225
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 60/144 (41%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D+ + + + + GI V R + + + + ++ + ++ +
Sbjct: 81 MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGF 140
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS + N +S RA + +LI+ ++ ++ G+A
Sbjct: 141 FQSVPN-PIVVEGHTDSRPIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 199
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 200 DTKPVVPNDSPQNWEKNRRVVIYI 223
>gi|148262600|ref|YP_001229306.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146396100|gb|ABQ24733.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 199
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 56/194 (28%), Gaps = 12/194 (6%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL--------DKAEDEF 54
K L GC KK + + + ++
Sbjct: 7 KYLLFLTIGALFAGGCAKHEMVKKDEVVPAAEPVKSAETSTVKPVLNETGIKDQPIKEAP 66
Query: 55 QMQLQDTGIVVSRIGD---MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
L I + + + L L A I+ K I
Sbjct: 67 ITSLPGGDIANTNTANADARPEAALEKIFFDFDSYALTPIARDTLTNNAKIMGKRAGVKI 126
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I+ H D +G+ + NL + ++RA YL+ + ++V + + P D +
Sbjct: 127 QIEGHCDELGSDEYNLALGEKRAKSAMQYLVT-MGVPAQRLAVISYGKEKPADPGHGEAA 185
Query: 172 RQNNQRIEIQIFPR 185
N+R E I +
Sbjct: 186 WAKNRRNEFVIISK 199
>gi|157377275|ref|YP_001475875.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157319649|gb|ABV38747.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
Length = 201
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 74/180 (41%), Gaps = 10/180 (5%)
Query: 4 ELGLSMFIMTTISGCGL---ASREKKKVFLHKSNDTDIVNKRFGSSL--DKAEDEFQMQL 58
+ + + + + GC + ++ +H ND D D
Sbjct: 2 KTFIFILSIALLGGCSSHDIVTMDEPTNQIHDLNDLDTDGVIVARERCNDTVLGATIDNY 61
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + + +++ ++ +++IAT + +P+TV+ I+ H
Sbjct: 62 GCGKVSAINERSELKI-----LFANDSYYIDPQYYDQIEVIATFMTDYPNTVVTIEGHCS 116
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ +NL +SQ RA+ + + L ++ + ++ G+++ P+D ++T + N+R+
Sbjct: 117 KTGSYDHNLTLSQNRANAVTTTLTEQFGINPDRLTAIGYSFDRPVDMSETSIAHTRNRRV 176
>gi|116622076|ref|YP_824232.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116225238|gb|ABJ83947.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 605
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 65/163 (39%), Gaps = 4/163 (2%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ---DTGIVVSRIGDMITCYIPVH 79
+ + + + + + + + + QL +T + + +
Sbjct: 426 KAENEAQRVAAKAASDRAAGDKAQAEAEKAQLRAQLLVQFNTVLQTRDTARGLIVNMSDV 485
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L L +A IL P + ++ +TDS+G+ +N L+S+ RA ++
Sbjct: 486 LFDTGKFTLRAGAREKLARVAGILAGHPGLQMQVEGYTDSVGSETSNQLLSERRATSVRD 545
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++ +G P+ +ND GRQ N+R+E+ +
Sbjct: 546 -YLTSAGIPPASVTAKGLGETLPVASNDNAAGRQQNRRVELVV 587
>gi|187233929|gb|ACD01211.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus]
Length = 174
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 72/181 (39%), Gaps = 13/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M ++ C + + +N+ V + +D++ + +L++
Sbjct: 6 VLKGLLIALPVM-AVTACSSSD-DAASNTGAATNNNGAVETTVAAPIDQSGQLTEQELKE 63
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A+ L+K P+ + I+ H D
Sbjct: 64 QALRETQT----------IYFAFDNSTIAADYEEMLAAHASYLSKNPALNVTIEGHADER 113
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + +YL IS+ + + P+ + N+R +
Sbjct: 114 GTPEYNIALGERRAQAVANYLQAL-GVQADQISIVSYGEEKPLLLGQSDEVYAKNRRAVL 172
Query: 181 Q 181
Sbjct: 173 V 173
>gi|146277438|ref|YP_001167597.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145555679|gb|ABP70292.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 367
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 8/160 (5%)
Query: 31 HKSNDTDIVNKRFGSSLD--KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF- 87
+ K + LD + + ++ + + V ++ + + SF S
Sbjct: 206 VGGEQGAALRKSVRAELDTLRLRNALDREVAEGLVKVEQMDGKVFVSLGAGGSFTSGSDV 265
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQ 143
L + ++ IA + P I + HTD++ G ++N+ ++ RA + L+
Sbjct: 266 LSEDARAVMSRIAEA-TQHPERTITVTGHTDNVPVAGGAFRDNIALAAGRAASVVRELVA 324
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
G I+ P+ N T+ GR N+RIEI+I
Sbjct: 325 TGGVDPGRITAVSRGEFDPVADNATEAGRTQNRRIEIEIT 364
>gi|242238603|ref|YP_002986784.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya
dadantii Ech703]
gi|242130660|gb|ACS84962.1| peptidoglycan-associated lipoprotein [Dickeya dadantii Ech703]
Length = 168
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 61/181 (33%), Gaps = 19/181 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + ++ C S+ G ++ AE
Sbjct: 6 VLKGLMLALPV-LAVAACSSNKHANNDQ----SSLNGGAGLENGGNMSSAEQA------- 53
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
R+ + + + + F ML A L PS + ++ H D
Sbjct: 54 ------RLQMQELQRNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTVEGHADER 107
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S ISV + + P + N+R +
Sbjct: 108 GTPEYNIALGERRANAV-QMYLQGKGVSADQISVVSYGKEKPAVLGHDEAAWSKNRRAVL 166
Query: 181 Q 181
Sbjct: 167 V 167
>gi|221639652|ref|YP_002525914.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
gi|221160433|gb|ACM01413.1| OmpA/MotB domain protein [Rhodobacter sphaeroides KD131]
Length = 366
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 8/153 (5%)
Query: 37 DIVNKRFGSSLD--KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ + + LD + + ++ + + V + + + SF L
Sbjct: 211 AALRQSVRAELDAIRLRNALDREVAEGLVKVEQTDGKVFVSLGAGGSFPSGSDDLTPDAR 270
Query: 94 PMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
++ IA + P I + HTD S G ++N+ ++ RA + L+ G
Sbjct: 271 AVMARIAEA-TRNPERTITVTGHTDNVPVSGGAFRDNIALAAGRAASVVRELVASGSVDP 329
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I+ P+ N T+ GR N+RIEI+I
Sbjct: 330 GRITAVSRGEFDPVADNATEEGRAQNRRIEIEI 362
>gi|170720328|ref|YP_001748016.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169758331|gb|ACA71647.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 230
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I L L I+T L + PS +++ HTDS+G+ N +S+ RA
Sbjct: 121 IRDVHFEFDSARLTPADKERLNTISTRLKQEAPSARLSVTGHTDSVGSDSYNQNLSERRA 180
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL++ GV F+SV G P+ N T GR N+R EI+I
Sbjct: 181 HSVTDYLVESGVPRASFVSVVGAGETQPVADNATADGRSMNRRTEIKI 228
>gi|312962530|ref|ZP_07777021.1| OmpA/MotB [Pseudomonas fluorescens WH6]
gi|311283457|gb|EFQ62047.1| OmpA/MotB [Pseudomonas fluorescens WH6]
Length = 271
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
S+ + + Q+ + ++ + + + E L+ + I L
Sbjct: 127 SVQQQGKWLEEQIAS--LTTTQTDRGLVMTLGDVLFDTGEAELKNSANRTVLKIVQFLQL 184
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P V+ I+ + D+ G + NL +S++RA + L+ + I V G+ +YP++
Sbjct: 185 NPKRVVRIEGYADNTGGQQENLKLSRDRAQSVADVLVDL-GIDEKRIQVEGYGDQYPVEA 243
Query: 166 NDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 244 NASERGRAQNRRVEIV 259
>gi|306844687|ref|ZP_07477272.1| peptidoglycan-associated lipoprotein [Brucella sp. BO1]
gi|306274859|gb|EFM56629.1| peptidoglycan-associated lipoprotein [Brucella sp. BO1]
Length = 168
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 26/173 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++F+ ++GC
Sbjct: 12 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFT----------------- 54
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + + L A L ++P I I+ H D GT +
Sbjct: 55 -VNVGDRI-------FFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADERGTRE 106
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + Q RA + +L RGV +NR ++ + + P+ D N+R
Sbjct: 107 YNLALGQRRAAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADSCWSQNRR 158
>gi|251790481|ref|YP_003005202.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya zeae
Ech1591]
gi|247539102|gb|ACT07723.1| peptidoglycan-associated lipoprotein [Dickeya zeae Ech1591]
Length = 168
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 19/181 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + I+ C S+ G ++ AE
Sbjct: 6 VLKGLMLALPV-LAIAACSSNKHANNDQ----SSLNGGAGMENGGNMSSAEQA------- 53
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
R+ + + + + F ML A L PS + ++ H D
Sbjct: 54 ------RLQMQELQRNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTVEGHADER 107
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S ISV + + P + N+R +
Sbjct: 108 GTPEYNIALGERRANAV-QMYLQGKGVSADQISVVSYGKEKPAVLGHDEAAWSKNRRAVL 166
Query: 181 Q 181
Sbjct: 167 V 167
>gi|42780820|ref|NP_978067.1| flagellar motor protein MotS [Bacillus cereus ATCC 10987]
gi|42736740|gb|AAS40675.1| chemotaxis protein MotB, putative [Bacillus cereus ATCC 10987]
gi|324325747|gb|ADY21007.1| flagellar motor protein MotS [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 225
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 58/144 (40%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D + + + + GI V R + + + + ++ + ++ +
Sbjct: 81 MDDLYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISKLVGF 140
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS N +S RA + +LI+ ++ ++ G+A
Sbjct: 141 FQSVPN-SIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNVEDKRLAAVGYA 199
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 200 DTKPVVPNDSPQNWEKNRRVVIYI 223
>gi|284036695|ref|YP_003386625.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283815988|gb|ADB37826.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 658
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 7/171 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS------RIGDMI 72
A + L + + G +F + + G+ +S G
Sbjct: 489 ADAQTGQYTAVLPSGGEYALYVSVPGYLFKSLSFDFTQKTKGEGLTLSVPLEPVSTGASA 548
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ L +K L ++ + P+ + I HTD G NL +SQ+
Sbjct: 549 NETLNNLFFESGRYDLAEKSRTELDRLSVFMQANPTVAVEISGHTDDKGDAAANLALSQK 608
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + + + I G+ P+ N T R+ N+RI+ ++
Sbjct: 609 RAQAVV-TYLTKAGIQPSRIKAVGYGKARPLVPNTTDENRRLNRRIDWRVL 658
>gi|260889292|ref|ZP_05900555.1| outer membrane protein, porin F [Leptotrichia hofstadii F0254]
gi|260860703|gb|EEX75203.1| outer membrane protein, porin F [Leptotrichia hofstadii F0254]
Length = 269
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT-CYIPVHV 80
S++K + + T + E Q + + V I
Sbjct: 103 SQQKTQAVQNNQPVTAASAQSEAEQTTATVSEIQEKPINNPQKVQISKSEIITLRSNDLN 162
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+K+ P+L+ I + K +++I +TD G N +S RA+ +
Sbjct: 163 FQKNSTDLKKEAYPVLRDIKDYIEKN-DFLVSIIGYTDKSGVSSYNKRLSLRRAEKVSLK 221
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
LI+ G+S +R + + G PI TNDT+ GR+ N+R+E + +G +
Sbjct: 222 LIELGLSKDRVVDLIGRGESNPIKTNDTEEGREGNRRVEFRFVKKGQV 269
>gi|256421238|ref|YP_003121891.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256036146|gb|ACU59690.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 594
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ +E +L+ P L + +L K+P VI + +HTDS G+ N +S R
Sbjct: 477 IVLENVYYDFNESYLQPASFPSLDRLVAMLKKYPKIVIELSAHTDSKGSNDLNEKLSDAR 536
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQIFPRG 186
A YL+ + + + +G+A +P+ N D GR N+R E +I R
Sbjct: 537 AKSCVDYLVSQ-GIESTRLQAKGYAASHPVAPNTNKDGSDNPEGRARNRRTEFKILSRE 594
>gi|255019372|ref|ZP_05291483.1| outer membrane porin OprF [Acidithiobacillus caldus ATCC 51756]
gi|254971192|gb|EET28643.1| outer membrane porin OprF [Acidithiobacillus caldus ATCC 51756]
Length = 226
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ L L + +A + + P I + HTD+IG N +S+ RA+ +K+
Sbjct: 39 FDYNKATLRPDALKTVGELAQTMRQNPQLFIGLDGHTDNIGGTDFNQKLSEARANAVKAA 98
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ-IFP 184
L+ +G+ ++R I+ RG P+ N T GR N+R+E+ + P
Sbjct: 99 LVAQGIDASR-IATRGLGATQPVADNATDAGRAKNRRVEVVNLTP 142
>gi|227536011|ref|ZP_03966060.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227244124|gb|EEI94139.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 460
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L+ + L +A L ++ + + + + GT N+ +S++RA+ +
Sbjct: 358 SIQFEFDSSVLKTESYSTLDRLAKELRDN-NSSVTLDGYASAEGTEAYNMTLSKDRANAV 416
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
K + + ++ G+ P+ +N T+ GR N+R+EI+
Sbjct: 417 KQ-YLVNAGVTAAKVTANGYGEANPVASNATEEGRIQNRRVEIK 459
>gi|107099070|ref|ZP_01362988.1| hypothetical protein PaerPA_01000079 [Pseudomonas aeruginosa PACS2]
Length = 449
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFP 107
+ ++ + V D I F S + +F P+L IA L K
Sbjct: 307 RLARFLADDIKAQRVAVEDAVDRSVVTIRGDELFASASASVRDEFQPLLLRIADALRKVK 366
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + H+D+ +N +SQ RA + L + R + G + P+
Sbjct: 367 G-QVLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGDAGR-FTAEGRSDTEPV 424
Query: 164 DTNDTKVGRQNNQRIEIQIFPRG 186
+N + GR N+R+EI +F G
Sbjct: 425 ASNASAEGRARNRRVEITVFAEG 447
>gi|315186378|gb|EFU20138.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578]
Length = 239
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 8/157 (5%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE-KKFLPMLQ 97
+ + KA FQ +++ + V + + + F S L + L
Sbjct: 83 GRALDQARKKAISAFQPEIRAKTVRVKQDERGLVITLAADAFFRSASAELNIEAARETLI 142
Query: 98 LIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS----YLIQRGVSSNRF 151
++ +L + I I+ HTD + T S ++ + +
Sbjct: 143 KLSNLLTSPELEGRKIRIEGHTDDVPTDPAGPWPSNWELSSARAINVLHFLSDYGVDENH 202
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
V G A P+ N T GR N+RI+I I G++
Sbjct: 203 FQVMGLADTVPLADNSTPEGRAYNRRIDIVILSEGHL 239
>gi|167623623|ref|YP_001673917.1| peptidoglycan-associated lipoprotein [Shewanella halifaxensis
HAW-EB4]
gi|167353645|gb|ABZ76258.1| Peptidoglycan-associated lipoprotein [Shewanella halifaxensis
HAW-EB4]
Length = 179
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 57/178 (32%), Gaps = 7/178 (3%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + + IS C S + + + G + Q
Sbjct: 8 KAMLVVLPIMAISACSSTSESETDATSSTESSSSSEYANNGVETGGVAPVLTPEEQQRLK 67
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ I + ++F +L L + P+ + I+ H D GT
Sbjct: 68 YQELRKEHII------YFDFDRSSVSQQFAEVLSAHGDYLVEHPNVRVMIEGHADERGTP 121
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA + +Q +SV + + P+D + G N+R +
Sbjct: 122 EYNIALGERRAKAVAK-YLQGMGVQPSQMSVVSYGEEKPMDFTRSDEGFAKNRRAVLV 178
>gi|300771716|ref|ZP_07081591.1| outer membrane protein OprF [Sphingobacterium spiritivorum ATCC
33861]
gi|300761705|gb|EFK58526.1| outer membrane protein OprF [Sphingobacterium spiritivorum ATCC
33861]
Length = 460
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L+ + L +A L ++ + + + + GT N+ +S++RA+ +
Sbjct: 358 SIQFEFDSSVLKTESYSTLDRLAKELRDN-NSSVTLDGYASAEGTEAYNMTLSKDRANAV 416
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
K + + ++ G+ P+ +N T+ GR N+R+EI+
Sbjct: 417 KQ-YLVNAGVTAAKVTANGYGEANPVASNATEEGRIQNRRVEIK 459
>gi|104782507|ref|YP_609005.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
gi|95111494|emb|CAK16214.1| putative outer membrane protein, OmpA family [Pseudomonas
entomophila L48]
Length = 257
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 4/162 (2%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ E ++ ++ I +R + L+ + G +
Sbjct: 89 TAEETIRLRTAEAGMRGIEARRAEARLEVRTAQLNALKALKG---KETDRGTVVTFGDVL 145
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L +Q +A L P + ++ TDS G NL +S+ RA +
Sbjct: 146 FDTGRAELRSHSHDDIQRLAQFLRDNPERKVRVEGFTDSTGGDALNLRLSENRAAAVAHA 205
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L ++GV R +S G+ P+ +N RQ N+R+E+ +
Sbjct: 206 LRRQGVDPARIVSA-GYGKASPVASNADAHSRQLNRRVEVIV 246
>gi|307130110|ref|YP_003882126.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya
dadantii 3937]
gi|16116638|emb|CAC82710.1| peptidoglycan-associated lipoprotein [Erwinia chrysanthemi]
gi|306527639|gb|ADM97569.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya
dadantii 3937]
Length = 168
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 61/181 (33%), Gaps = 19/181 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + ++ C S+ G ++ AE
Sbjct: 6 VLKGLMLALPV-LAVAACSSNKHANNDQ----SSLNGGAGMENGGNMSSAEQA------- 53
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
R+ + + + + F ML A L PS + ++ H D
Sbjct: 54 ------RLQMQELQRNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTVEGHADER 107
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S ISV + + P + N+R +
Sbjct: 108 GTPEYNIALGERRANAV-QMYLQGKGVSADQISVVSYGKEKPAVLGHDEAAWSKNRRAVL 166
Query: 181 Q 181
Sbjct: 167 V 167
>gi|87118951|ref|ZP_01074849.1| peptidoglycan-associated lipoprotein OprL [Marinomonas sp. MED121]
gi|86165342|gb|EAQ66609.1| peptidoglycan-associated lipoprotein OprL [Marinomonas sp. MED121]
Length = 208
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 68/200 (34%), Gaps = 23/200 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKS-NDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
++ + I+GC + E + ++ +T +S ++ F
Sbjct: 8 KMAVIGLSAAWIAGCSTTATETDSSSVTEAEGNTVAAQSSAANSTGSSDGSFGANGNGDL 67
Query: 63 IVVSRIGDMITCYIPVH---------------------VSFVSEVFLEKKFLPMLQLIAT 101
V G+ + + + L A
Sbjct: 68 SSVIVDGNGNVVSAENATAAQKAAANAKDMLVGVAHIFYFDFDKSIVRPEAREALAKHAK 127
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
L P + ++ H D GT + N+ + + RA + YL +GV++ + SV F +
Sbjct: 128 FLVANPDARVVLEGHADERGTREYNMALGERRAKAVSRYLTIQGVAAAQIESVS-FGEEK 186
Query: 162 PIDTNDTKVGRQNNQRIEIQ 181
P++ K Q N+R+E++
Sbjct: 187 PLEFGHDKAAWQANRRVEVR 206
>gi|86134567|ref|ZP_01053149.1| OmpA family protein [Polaribacter sp. MED152]
gi|85821430|gb|EAQ42577.1| OmpA family protein [Polaribacter sp. MED152]
Length = 283
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 55/139 (39%), Gaps = 5/139 (3%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+QD I V+ ++ I + F + + +L IA ++ P +
Sbjct: 134 LADGIQDKDIEVNVEKTVVFISISDKLLFKSGSYNVTENAYTVLDKIAKVIKDQPKMEVM 193
Query: 113 IQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I+ HTD+ ++N +S RA I L + + G + P+ NDT
Sbjct: 194 IEGHTDTTPIKRDLIQDNWDLSALRATSITRILQYKFGVKPERLIAAGRSQYIPLAPNDT 253
Query: 169 KVGRQNNQRIEIQIFPRGN 187
+ N+R +I I P+ N
Sbjct: 254 AENKAKNRRTKIIIMPKLN 272
>gi|91227603|ref|ZP_01261907.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 12G01]
gi|262394683|ref|YP_003286537.1| OmpA [Vibrio sp. Ex25]
gi|269967693|ref|ZP_06181743.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 40B]
gi|91188496|gb|EAS74789.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 12G01]
gi|262338277|gb|ACY52072.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp.
Ex25]
gi|269827780|gb|EEZ82064.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 40B]
Length = 174
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 72/181 (39%), Gaps = 13/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M ++ C + + +N+ V + +D++ + +L++
Sbjct: 6 VLKGLLIALPVM-AVTACSSSD-DAASNTGAATNNNGAVETTVATPIDQSGQLTEQELKE 63
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A+ L+K P+ + I+ H D
Sbjct: 64 QALRETQT----------IYFAFDNSTIAADYEEMLAAHASYLSKNPALNVTIEGHADER 113
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + +YL IS+ + + P+ + N+R +
Sbjct: 114 GTPEYNIALGERRAQAVANYLQAL-GVQADQISIVSYGEEKPLLLGQSDEVYAKNRRAVL 172
Query: 181 Q 181
Sbjct: 173 V 173
>gi|302392384|ref|YP_003828204.1| OmpA/MotB domain protein [Acetohalobium arabaticum DSM 5501]
gi|302204461|gb|ADL13139.1| OmpA/MotB domain protein [Acetohalobium arabaticum DSM 5501]
Length = 248
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
K Q Q + I V +T V F +++ +L I+ I+++
Sbjct: 92 QKITSYLQEQELEDEIKVEMTERGLTIRFTGKVLFDIGRATIKEDAYSILDKISGIISEV 151
Query: 107 PSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I ++ HTD++ + N +S RA + Y I+ + +S G++ P
Sbjct: 152 PN-QIMVEGHTDNLPISNSRFPSNWELSTARATEVVKYFIEENSITPAKLSAAGYSKYKP 210
Query: 163 IDTNDTKVGRQNNQRIEIQIFPRG 186
+ ND+ R N+R+++ + R
Sbjct: 211 VKPNDSPENRALNRRVDVILLKRE 234
>gi|260549981|ref|ZP_05824196.1| OmpA family protein [Acinetobacter sp. RUH2624]
gi|260406973|gb|EEX00451.1| OmpA family protein [Acinetobacter sp. RUH2624]
Length = 472
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 69/179 (38%), Gaps = 4/179 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ L + + S + +SL ++ + +
Sbjct: 296 KITLKAGDAAALEALTAKVKALVPHTEVVSAAPQTAEQSVSNSLTASQTAL-GSIDPNNV 354
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V+ + + I + +L AT+LNK S + + HTDS G
Sbjct: 355 DVNALVKALNLQIIN--FASGSSEIPADNKAILDQAATLLNKVTSVKLNVGGHTDSTGNA 412
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL+ +GV +++ + +G + P+ N T+ GR N+RIE +
Sbjct: 413 AANKALSQRRAQAVVDYLVSKGVDASKLV-AQGHGSENPVAENTTEEGRFKNRRIEFSV 470
>gi|49083180|gb|AAT50966.1| PA1048 [synthetic construct]
Length = 294
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 63/174 (36%), Gaps = 10/174 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G AS+ K L + K LD E + + + + R + +
Sbjct: 121 GASSASKASGKPAL-------VQQKVTKEWLDAHEKALREAIAGSEFTLERRDNALIVIA 173
Query: 77 PVHVSFVSE--VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
P SF + L L +A + P + I + HTDS G+ N +S ERA
Sbjct: 174 PADYSFNPKRHTMLMPITRNPLGKVAKMAQADPQSGILVLGHTDSTGSKAVNDKLSFERA 233
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ + + ++G P N + GR N+R+E+ R ++
Sbjct: 234 QSVAAIFRL-SGLKGDQLRLKGVGSDMPRADNASAAGRAQNRRVEVLYTQRASL 286
>gi|255033902|ref|YP_003084523.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254946658|gb|ACT91358.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 638
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + I + I + E L+ K L ++ L+K + I I
Sbjct: 511 EQSFINLEIPLEAIEKDRAEVLNNIFFKTGEYILDDKSKVELDKMSDFLHKNKTIKIEIS 570
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD +G+ N+ +SQ RA + Y +Q+ + I +G+ P ND+ RQ
Sbjct: 571 GHTDDVGSDTENMALSQRRAQSV-QYYLQQSGIAADRILAKGYGETTPKAPNDSDENRQK 629
Query: 175 NQRIEIQIF 183
N+RIE +I
Sbjct: 630 NRRIEWRIL 638
>gi|220918973|ref|YP_002494277.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956827|gb|ACL67211.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 544
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 5/166 (3%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C K +D D V DK + I
Sbjct: 378 CPSVPGATDNQGCPKDSDKDGVPDDKDRCPDKPGIPENQGCPPERAEIKAGKIDIK---E 434
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ K +L +A ++ P V+ I+ HTDS G+ N +SQ+RA+
Sbjct: 435 KVYFDTGKDTIKAKSNALLDDVAKLVAANPQVGVVTIEGHTDSTGSAATNRALSQKRAEA 494
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+K YL+ +GV ++R + +GF P+++N T GR+ N+R+E I
Sbjct: 495 VKDYLVSKGVDASR-LEAKGFGPDQPVESNKTAKGREANRRVEFTI 539
>gi|172065635|ref|YP_001816347.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171997877|gb|ACB68794.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 231
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ L ++ + P + I +TDS GT ++N +SQ RA
Sbjct: 126 SDANFDTDKSTLKTDARDKLDVLIEAAHGTPFKTVTISGYTDSTGTAEHNQQLSQRRAQS 185
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL + S + VRG+ P+ +N T GR N+R++I +
Sbjct: 186 VAQYLRE-HGLSAQKFDVRGYGENNPVASNATPAGRAKNRRVDITL 230
>gi|83647833|ref|YP_436268.1| flagellar motor protein MotD [Hahella chejuensis KCTC 2396]
gi|83635876|gb|ABC31843.1| Flagellar motor protein [Hahella chejuensis KCTC 2396]
Length = 260
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 63/170 (37%), Gaps = 7/170 (4%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
+ +R ++ + + + ++ + I + ++ F S
Sbjct: 88 NSPEDPAGETSEEQAGERLREIANRFNYRLKGLIGQGMVSINENDNWIELSLRNNLLFNS 147
Query: 85 EVFLEKKFLPML-QLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKS 139
+ L IA IL +P+ I ++ TD++ +N +S R+ +
Sbjct: 148 GDAVPVDAAFNLIDGIAGILKDYPNA-ILVEGFTDNVPIRSSAYPSNWELSSARSAAVAR 206
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
LI R ++ G+ P+ NDT GRQ N+R+ + + ++
Sbjct: 207 LLIIG-GVDPRRLAAVGYGEYQPVARNDTSEGRQRNRRVVLLVAKDAKVR 255
>gi|304407655|ref|ZP_07389306.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9]
gi|304343138|gb|EFM08981.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9]
Length = 263
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 67/181 (37%), Gaps = 13/181 (7%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIV------NKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
++G S + V + + N+ + + + + + V+
Sbjct: 72 VTGALDPSIKPAPVKPPEEKPNAALEEEKRKNQELENVFAIIQAYIKNNKLEEKVFVTNE 131
Query: 69 GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS-----IGT 122
++ + F + L+K P+L ++++ K I+I+ HTD+ G
Sbjct: 132 EQGVSIRLSDQFLFDLGKADLKKAARPILDKLSSLFVKL-DHPISIEGHTDNLPIQPGGE 190
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++N +S R+ + Y + + G+ PI N T R N+R+EI I
Sbjct: 191 FRDNWALSAGRSLSVLRYFTEIAQLEPTKFQIAGYGDTRPIAPNTTDANRSRNRRVEITI 250
Query: 183 F 183
Sbjct: 251 L 251
>gi|254462550|ref|ZP_05075966.1| flagellar MotB protein [Rhodobacterales bacterium HTCC2083]
gi|206679139|gb|EDZ43626.1| flagellar MotB protein [Rhodobacteraceae bacterium HTCC2083]
Length = 411
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 67/167 (40%), Gaps = 17/167 (10%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+E+ + L K+ + + K + + ++++ + V R + + +
Sbjct: 252 DKERAQKALDKAREAEA----------KLKANLENEIENGLVTVERREGKVFVNLGSGGA 301
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQERAD 135
F L ++ +A P + + + HTD++ ++N ++ RA
Sbjct: 302 FPSGSASLTGAAQAIVAELAAT-TNDPDSSVVVAGHTDNVPIGFGALYRDNWDLAAARAA 360
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + R +S + PI NDT GR+ N+RIEI+I
Sbjct: 361 SVVQEIEGLNLVPEREMSATSYGEARPIADNDTPEGREKNRRIEIEI 407
>gi|229195941|ref|ZP_04322694.1| OmpA/MotB domain protein [Bacillus cereus m1293]
gi|228587500|gb|EEK45565.1| OmpA/MotB domain protein [Bacillus cereus m1293]
Length = 213
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 58/144 (40%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D + + + + GI V R + + + + ++ + ++ +
Sbjct: 69 MDDLYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISKLVGF 128
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS N +S RA + +LI+ ++ ++ G+A
Sbjct: 129 FQSVPN-SIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNVEDKRLAAVGYA 187
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 188 DTKPVVPNDSPQNWEKNRRVVIYI 211
>gi|224367491|ref|YP_002601654.1| OmpA1 [Desulfobacterium autotrophicum HRM2]
gi|223690207|gb|ACN13490.1| OmpA1 [Desulfobacterium autotrophicum HRM2]
Length = 374
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 1/131 (0%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ T IV + + + ++ L + +L P+
Sbjct: 241 KKPMVQAPAPTPIVATPPAVEKAWVVGEAYFDFDKSIIKPAGFEFLDKVVDVLKSRPALF 300
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ IQ HTDSIGT K N +S RA + + +S GFA+ P+ +N T
Sbjct: 301 VKIQGHTDSIGTRKYNDALSLRRAKAV-KTYLINKGIDKNRLSCEGFAFSKPVASNKTAE 359
Query: 171 GRQNNQRIEIQ 181
GR N+R+E+
Sbjct: 360 GRAMNRRVELY 370
>gi|262038680|ref|ZP_06012041.1| outer membrane protein [Leptotrichia goodfellowii F0264]
gi|261747295|gb|EEY34773.1| outer membrane protein [Leptotrichia goodfellowii F0264]
Length = 147
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + + ++ ++ +LQ + + + + I HTDS GT + N+ +
Sbjct: 34 VVLDERSLLFDFDKSNVKPQYYGILQNLKEYI-EVNDYDVTIIGHTDSKGTNEYNMKLGM 92
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
RA+ +K+ +I+ GV ++R + V + P+ TNDT GR N+RIE ++ +
Sbjct: 93 RRAESVKAKMIEFGVPASRIVGVESRGEEEPVATNDTAEGRALNRRIEFKLVRKN 147
>gi|229160692|ref|ZP_04288684.1| OmpA/MotB domain protein [Bacillus cereus R309803]
gi|228622707|gb|EEK79541.1| OmpA/MotB domain protein [Bacillus cereus R309803]
Length = 226
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMITCYI-PVHVSFVSEVFLEKKFLPMLQLIATI 102
+D + + + + GI V R ++ I + + ++ + ++ +
Sbjct: 82 MDDLYKKLKAYVDNNGISQVNVYREDTGVSIVIVDNLIFDTGDASVKPEAKEIISQLVGF 141
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS N +S RA + +LI+ ++ ++ G+A
Sbjct: 142 FQSVPN-PIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYHVDDKRLAAVGYA 200
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 201 DTKPVVPNDSPQNWEKNRRVVIYI 224
>gi|294637420|ref|ZP_06715711.1| peptidoglycan-associated lipoprotein [Edwardsiella tarda ATCC
23685]
gi|291089413|gb|EFE21974.1| peptidoglycan-associated lipoprotein [Edwardsiella tarda ATCC
23685]
Length = 170
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 17/181 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L + IM ++ C + N S ++ +LQ
Sbjct: 6 VLKGLMLVLPIM-AVAACSSKKNTNDDQSGMGVGANGMENSSSNLSSEEQARLQMQELQK 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + + +++ L A L PS + ++ HTD
Sbjct: 65 NNI---------------VYFGLDKYDVTPEYMQELDAHAAFLRNNPSYKVTVEGHTDER 109
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S I + + + P + N+R +
Sbjct: 110 GTPEYNIALGERRANAV-KMYLQGKGVSADQIDIVSYGKEKPAVLGHDEAAYAKNRRAVL 168
Query: 181 Q 181
Sbjct: 169 V 169
>gi|254506184|ref|ZP_05118328.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus 16]
gi|219551002|gb|EED27983.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus 16]
Length = 175
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 68/181 (37%), Gaps = 12/181 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ + ++ C + ++N + S +D+ + +L++
Sbjct: 6 VLKGLLIALPV-LAVTACSSSDDAANASGSTETNQAQTTDGTVVSPIDQNGLLTEQELKE 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A L+K P+ + ++ H D
Sbjct: 65 QALRETQT----------IYFAFDNATIAGDYEEMLAAHAAYLSKNPALKVTVEGHADER 114
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + YL IS+ + + P+ ++ N+R +
Sbjct: 115 GTPEYNIALGERRATAVAKYLQAL-GVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAVL 173
Query: 181 Q 181
Sbjct: 174 V 174
>gi|65318994|ref|ZP_00391953.1| COG1360: Flagellar motor protein [Bacillus anthracis str. A2012]
gi|228933012|ref|ZP_04095875.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228826613|gb|EEM72384.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 227
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 60/144 (41%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D+ + + + + GI V R + + + + ++ + ++ +
Sbjct: 83 MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGF 142
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS + N +S RA + +LI+ ++ ++ G+A
Sbjct: 143 FQSVPN-PIVVEGHTDSRPIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 201
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 202 DTKPVVPNDSPQNWEKNRRVVIYI 225
>gi|330448104|ref|ZP_08311752.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492295|dbj|GAA06249.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 352
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ I+ +P L + L+ IA L FP+ + + HTDS G+ N +
Sbjct: 230 EPISVTMP---FAFDSDKLTAEDEARLEPIAQRLVNFPNAELVVIGHTDSRGSEAYNQKL 286
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S+ERA + YL++ + G P+ +NDT GR N+R+++
Sbjct: 287 SEERAKTVALYLMKHFNIDASRVKGEGRGELDPVASNDTAEGRAQNRRVDVT 338
>gi|332297510|ref|YP_004439432.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
gi|332180613|gb|AEE16301.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
Length = 469
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 4/126 (3%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN---KFPSTVIAIQSHTDS 119
+ ++ I I L L IA +L + ++ HT S
Sbjct: 324 VTITDDYTGIQISIQNLQFIADSAELLPAEKLRLDTIAELLKTVTADNEFSVIVEGHTAS 383
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+G +S ERA I S + + + +GF P+ N T GR N+R+E
Sbjct: 384 VGKPAGEQQLSIERAQAIISAMA-QRGVDTGTFTSKGFGGTVPVGDNATPEGRAQNRRVE 442
Query: 180 IQIFPR 185
I I P+
Sbjct: 443 ILIVPK 448
>gi|322833830|ref|YP_004213857.1| peptidoglycan-associated lipoprotein [Rahnella sp. Y9602]
gi|321169031|gb|ADW74730.1| peptidoglycan-associated lipoprotein [Rahnella sp. Y9602]
Length = 170
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 17/181 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + ++ C ++ + S ++ +LQ
Sbjct: 6 VLKGLMLALPV-LAVAACSSHKNADNDQSNGMGLNSGAGTENANMSSEEQARLQMQELQK 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + + +F ML A L PS + ++ H D
Sbjct: 65 NNI---------------VYFGLDKYDVSSEFAQMLDAHAAFLRSNPSYKVTVEGHADER 109
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + +Q S IS+ + + P + N+R +
Sbjct: 110 GTPEYNIALGERRATAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 168
Query: 181 Q 181
Sbjct: 169 V 169
>gi|325106387|ref|YP_004276041.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324975235|gb|ADY54219.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 666
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++ L L ++A I+ P I + SHTD IG+ NL +SQ R
Sbjct: 551 IVLKDIYYEFNKAELTPMSAQALDILADIMMDNPKITIELSSHTDGIGSDAYNLDLSQRR 610
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQIFPR 185
A YLI + S I +G+ PI N D GR N+R E ++ +
Sbjct: 611 AQSCVDYLIAK-GISAGKIQAKGYGKSMPIAPNTINGKDNPEGRALNRRTEFKVIKK 666
>gi|302339083|ref|YP_003804289.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301636268|gb|ADK81695.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 384
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
T I+V + + +P E + + + L +A +L++ T + HT +
Sbjct: 262 TSILVEERSEGVVLTLPNIHFKPDEAEILPQEVSRLDELARVLSQIRDTSFLVVGHTADV 321
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT ++ +S +RA I S L QRG+ +RF+ G P+ +ND + GR+ N+R+EI
Sbjct: 322 GTKESQKELSVDRARRIISELSQRGLDESRFLY-DGVGGTQPVASNDNEEGRKKNRRVEI 380
Query: 181 QIF 183
+
Sbjct: 381 FLL 383
>gi|292489492|ref|YP_003532380.1| putative type VI secretion system core protein [Erwinia amylovora
CFBP1430]
gi|292898296|ref|YP_003537665.1| outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291198144|emb|CBJ45249.1| putative outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291554927|emb|CBA22885.1| putative type VI secretion system, core protein [Erwinia amylovora
CFBP1430]
gi|312173666|emb|CBX81920.1| putative type VI secretion system, core protein [Erwinia amylovora
ATCC BAA-2158]
Length = 413
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 55/139 (39%), Gaps = 7/139 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPS 108
+ + +++ + V D + F S + ++ +L +A +N
Sbjct: 260 LKTFLRPEIEQGLVAVRDEADRSVVTLKGDGLFTSASTEVRGRYAEVLDRVAAAMNSVSG 319
Query: 109 TVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I + ++D++ +N +S RA + +Q+ ++ + + G P+
Sbjct: 320 -RILVVGYSDNVPIRSARFASNYELSLARAQSVSEQ-LQQHLTQPQRVKAEGRGESNPLA 377
Query: 165 TNDTKVGRQNNQRIEIQIF 183
N++ R N+R+EI +
Sbjct: 378 PNNSAGNRARNRRVEITLL 396
>gi|289761034|ref|ZP_06520412.1| outer membrane protein A ompA [Mycobacterium tuberculosis GM 1503]
gi|289708540|gb|EFD72556.1| outer membrane protein A ompA [Mycobacterium tuberculosis GM 1503]
Length = 232
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L +L +A L P + I +TD+ G+ N+ +S +RA ++ Y
Sbjct: 131 FGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADY 190
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ R + I+ G PI +N T GR N+R+EI +
Sbjct: 191 LVAR-GVAGDHIATVGLGSVNPIASNATPEGRAKNRRVEIVV 231
>gi|126642864|ref|YP_001085848.1| outer membrane protein A [Acinetobacter baumannii ATCC 17978]
Length = 346
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 198 APVEPTPVTPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 257
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 258 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 317
Query: 175 NQRI 178
N+R+
Sbjct: 318 NRRV 321
>gi|42528265|ref|NP_973363.1| flagellar motor protein MotB [Treponema denticola ATCC 35405]
gi|4426946|gb|AAD20620.1| flagellar motor protein MotB [Treponema denticola]
gi|41819535|gb|AAS13282.1| flagellar motor rotation protein B [Treponema denticola ATCC 35405]
gi|325474545|gb|EGC77731.1| flagellar motor protein MotB [Treponema denticola F0402]
Length = 239
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 9/172 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A R S + K S+L KA F +++ I V+ I +
Sbjct: 64 SAGRLSDLGNTISSMPSMEKGKMLASALKKAVSLFAPEIKTNKIAVTSDERGIVISLASD 123
Query: 80 VSFV-SEVFLE-KKFLPMLQLIATIL--NKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
V F L + L +A L S ++ HTDS G N+ S
Sbjct: 124 VFFYPGSAELNIAESRDTLLNLAQFLSSQDLASYRFRVEGHTDS-GVTDPNVWKSNWELS 182
Query: 136 VIKS----YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++ + + + SV G+A PI +NDT GR N+R++I I
Sbjct: 183 SARAINILHSLTDFGAQESRFSVAGYADTRPIFSNDTAEGRAYNRRVDIIIL 234
>gi|229592075|ref|YP_002874194.1| hypothetical protein PFLU4673 [Pseudomonas fluorescens SBW25]
gi|229363941|emb|CAY51462.1| putative outer membrane protein [Pseudomonas fluorescens SBW25]
Length = 271
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
S+ + + Q+ + ++ + + + E L+ + I L
Sbjct: 127 SVQQQGKWLEEQIAS--LATTQTDRGLVMTLGDVLFDTGEAELKNSANRTVLKIVQFLQL 184
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P V+ I+ + D+ G + NL +S++RA + L+ + I V G+ +YP++
Sbjct: 185 NPKRVVRIEGYADNTGGERENLKLSRDRAQSVADVLVDL-GIDEKRIQVEGYGDQYPVEA 243
Query: 166 NDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 244 NASERGRAQNRRVEIV 259
>gi|228984812|ref|ZP_04144984.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228775010|gb|EEM23404.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 225
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 60/144 (41%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D+ + + + + GI V R + + + + ++ + ++ +
Sbjct: 81 MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGF 140
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS + N +S RA + +LI+ ++ ++ G+A
Sbjct: 141 FQSVPN-PIVVEGHTDSRPIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 199
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 200 DTKPVVPNDSPQNWEKNRRVVIYI 223
>gi|254491010|ref|ZP_05104191.1| OmpA family protein [Methylophaga thiooxidans DMS010]
gi|224463523|gb|EEF79791.1| OmpA family protein [Methylophaga thiooxydans DMS010]
Length = 263
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ + K L + R + +D +F + + + + ++ D I I S
Sbjct: 94 ASDSDKDALKVEDAAVYEAARMQTLMDDLTKKFSTAINNDLLSLEQLPDRIMIRINEKTS 153
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADV 136
F L+ FLP+L LIA L + T I + H+D++ G ++N +S RA
Sbjct: 154 FTSGGAKLKTAFLPVLSLIAETLAELDDTFI-VSGHSDNVPLRSGNYRSNWELSGARATS 212
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L++ + +A P+++NDT GR N+R+EI I
Sbjct: 213 VVHALLRHPKLVPSQFRIEAYADTQPVESNDTAAGRATNRRVEIGIVNN 261
>gi|307610480|emb|CBX00052.1| hypothetical protein LPW_18071 [Legionella pneumophila 130b]
Length = 267
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 9/177 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--EFQMQLQDTGIVVSRIGDMITCYIP- 77
+ K D K G+ D ++ + +L+D ++R + I
Sbjct: 60 KDQNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKA 119
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQER 133
+ ++ + L L +A + P + ++ +TD+ +N +S R
Sbjct: 120 GSLFDSGSADIKPEALIKLMKLAEKIKNLP-FTVVVEGYTDNVPIETPQYPSNWELSAAR 178
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + ++ +N I V G+ +YPI N T+ GR N+R+ I I + +
Sbjct: 179 AATVGR-ILNGFGIANHRILVTGYGDQYPITDNYTEAGRSQNRRVNILITKNRKVDR 234
>gi|298524392|ref|ZP_07011801.1| outer membrane protein [Mycobacterium tuberculosis 94_M4241A]
gi|298494186|gb|EFI29480.1| outer membrane protein [Mycobacterium tuberculosis 94_M4241A]
Length = 181
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L +L +A L P + I +TD+ G+ N+ +S +RA ++ Y
Sbjct: 80 FGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADY 139
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ R + I+ G PI +N T GR N+R+EI +
Sbjct: 140 LVAR-GVAGDHIATVGLGSVNPIASNATPEGRAKNRRVEIVV 180
>gi|329848731|ref|ZP_08263759.1| peptidoglycan-associated lipoprotein [Asticcacaulis biprosthecum
C19]
gi|328843794|gb|EGF93363.1| peptidoglycan-associated lipoprotein [Asticcacaulis biprosthecum
C19]
Length = 177
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 61/173 (35%), Gaps = 8/173 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ L F+MT+++ C K T V Q L G+
Sbjct: 2 KVALVAFVMTSVAAC-------TKKAEPVVPKTPDVVTTQPQPTQPTVPPKQTALPPVGV 54
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
D + + + +L A L ++P+ I I+ + D GT
Sbjct: 55 TPGSQQDFVVNVGDRVYFDTDQSSIRADAQAVLSAQAAWLVRYPAVKIRIEGNADERGTR 114
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+ N + RA + +L +GV +R IS + + PI T + Q N+
Sbjct: 115 EYNFALGARRAQAVADFLTSKGVVPSR-ISTISYGKEQPIATGADEDAWQQNR 166
>gi|260774919|ref|ZP_05883820.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609174|gb|EEX35332.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC
BAA-450]
Length = 188
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ ++ L+ + ML + + +FP + + + +TDS G N +S+ RA
Sbjct: 75 VDSSSFALNSAELKPESKAMLAELVAFMTEFPQSTVEVVGYTDSSGAASYNQKLSERRAQ 134
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L ++G+ ++R IS RG PI +N+T+ GR+ N+R+EI +
Sbjct: 135 SVADALEEQGIDASR-ISARGEGENNPIASNETQQGREQNRRVEIMV 180
>gi|317047358|ref|YP_004115006.1| peptidoglycan-associated lipoprotein [Pantoea sp. At-9b]
gi|316948975|gb|ADU68450.1| peptidoglycan-associated lipoprotein [Pantoea sp. At-9b]
Length = 170
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 63/181 (34%), Gaps = 17/181 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + ++ C ++ + S D+ QLQ
Sbjct: 6 VLKGLMLALPV-IAVAACSSHKNNNNDQTGMGADGAYGSGQNGNMSSDEQARLQMQQLQQ 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + ++ ++ ML A L PS + I+ H D
Sbjct: 65 NNI---------------VYFGLDKYDVQSEYAQMLDQHAAFLRSNPSYKVTIEGHADER 109
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S +S+ + + P + N+R +
Sbjct: 110 GTPEYNIALGERRANAV-KMYLQGKGVSADQMSIVSYGKEKPAVLGHDEAAYAKNRRAVL 168
Query: 181 Q 181
Sbjct: 169 V 169
>gi|284039490|ref|YP_003389420.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283818783|gb|ADB40621.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 361
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 1/163 (0%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ KV + K ++ A D Q+ + T +
Sbjct: 199 TIPPKDPKVAVQKPIIKPSAPQKAVVLPTIALDTPQVATTSPPVTKPDFNAGTTFVLHQV 258
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
S L + L+ + + + P I + HTD++G + NL +S+ RA V+ S
Sbjct: 259 QFEQSSYILVPESSAELEKLVRAMKENPLRSIDVSGHTDNVGDPRLNLALSENRAKVVAS 318
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++R ++ I+ G+ PI N+T+ R N+R+EI I
Sbjct: 319 -YLKRRGIADDRITTIGYGGTRPIGNNNTEGERAKNRRVEITI 360
>gi|89070199|ref|ZP_01157527.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
gi|89044215|gb|EAR50366.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
Length = 623
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ ++ IA +L + I + +TDS G + N +SQ+RA+ + +
Sbjct: 497 FDPGSADIDGDSQRVVDDIAEVLRQCTDLEIEVAGYTDSQGREEMNQRLSQQRAEAVLAA 556
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L R V G+ PI NDT GR+ N+RIE ++
Sbjct: 557 LRLRRVPVG-AFRAVGYGEAEPIADNDTAEGREANRRIEFRLI 598
>gi|47566111|ref|ZP_00237149.1| sodium-driven polar flagellar protein PomB, putative [Bacillus
cereus G9241]
gi|47557028|gb|EAL15358.1| sodium-driven polar flagellar protein PomB, putative [Bacillus
cereus G9241]
Length = 225
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 58/144 (40%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D + + + + GI V R + + + + ++ + ++ +
Sbjct: 81 MDDLYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISKLVGF 140
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS N +S RA + +LI+ ++ ++ G+A
Sbjct: 141 FQSVPN-PIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNVEDKRLAAVGYA 199
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 200 DTKPVVPNDSPQNWEKNRRVVIYI 223
>gi|218888823|ref|YP_002437687.1| hypothetical protein PLES_00791 [Pseudomonas aeruginosa LESB58]
gi|218769046|emb|CAW24806.1| hypothetical protein PLES_00791 [Pseudomonas aeruginosa LESB58]
Length = 449
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 7/143 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFP 107
+ ++ + V D I F S + +F P+L IA L K
Sbjct: 307 RLARFLADDIKAQRVAVEDAVDRSVVTIRGDELFASASASVRDEFQPLLLRIADALRKVK 366
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + H+D+ +N +SQ RA + L + R + G + P+
Sbjct: 367 G-QVLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGDAGR-FTAEGRSDTEPV 424
Query: 164 DTNDTKVGRQNNQRIEIQIFPRG 186
+N GR N+R+EI +F G
Sbjct: 425 ASNANAEGRARNRRVEITVFAEG 447
>gi|169794682|ref|YP_001712475.1| putative lipoprotein precursor [Acinetobacter baumannii AYE]
gi|213157946|ref|YP_002320744.1| OmpA/MotB [Acinetobacter baumannii AB0057]
gi|215482270|ref|YP_002324452.1| Outer membrane protein A precursor [Acinetobacter baumannii
AB307-0294]
gi|239504137|ref|ZP_04663447.1| Outer membrane protein A precursor [Acinetobacter baumannii AB900]
gi|260554079|ref|ZP_05826342.1| outer membrane protein A [Acinetobacter sp. RUH2624]
gi|260558111|ref|ZP_05830321.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC
19606]
gi|301345841|ref|ZP_07226582.1| Outer membrane protein A precursor [Acinetobacter baumannii AB056]
gi|301512157|ref|ZP_07237394.1| Outer membrane protein A precursor [Acinetobacter baumannii AB058]
gi|301597153|ref|ZP_07242161.1| Outer membrane protein A precursor [Acinetobacter baumannii AB059]
gi|332851565|ref|ZP_08433542.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332867764|ref|ZP_08437836.1| OmpA family protein [Acinetobacter baumannii 6013113]
gi|332873499|ref|ZP_08441450.1| OmpA family protein [Acinetobacter baumannii 6014059]
gi|169147609|emb|CAM85470.1| putative lipoprotein precursor [Acinetobacter baumannii AYE]
gi|193078408|gb|ABO13390.2| putative lipoprotein precursor [Acinetobacter baumannii ATCC 17978]
gi|213057106|gb|ACJ42008.1| OmpA/MotB [Acinetobacter baumannii AB0057]
gi|213987976|gb|ACJ58275.1| Outer membrane protein A precursor [Acinetobacter baumannii
AB307-0294]
gi|260404818|gb|EEW98325.1| outer membrane protein A [Acinetobacter sp. RUH2624]
gi|260408384|gb|EEX01692.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC
19606]
gi|332729910|gb|EGJ61242.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332733770|gb|EGJ64922.1| OmpA family protein [Acinetobacter baumannii 6013113]
gi|332738324|gb|EGJ69200.1| OmpA family protein [Acinetobacter baumannii 6014059]
Length = 159
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 61/181 (33%), Gaps = 28/181 (15%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+L + ++GC + L+ G
Sbjct: 7 KLSFIALLCIALAGCLS--------------------------FGPLKYRQVKMLKKEGF 40
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V++ G + + ++ L++ L +A LNK+ + I HTD +G
Sbjct: 41 VLTNEGWTLGLP-ERLLFDFNDATLKQSHEAELTRLANQLNKYDLNKLKIVGHTDDVGNP 99
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N +S+ERA + + + I V G P N T R N+R+ I I
Sbjct: 100 EYNQKLSEERAQSVANLFLT-HGFKKENIYVIGRGSTQPYVPNTTNENRAINRRVAIVII 158
Query: 184 P 184
P
Sbjct: 159 P 159
>gi|104780438|ref|YP_606936.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
gi|95109425|emb|CAK14126.1| putative outer membrane protein, OmpA family [Pseudomonas
entomophila L48]
Length = 230
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I L L IAT L + PS +++ HTDS+G+ K N +S+ RA
Sbjct: 121 IRDVRFEFDSARLTANDKERLNTIATRLKKEAPSARLSVTGHTDSVGSDKYNQKLSEARA 180
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL++ GV F+SV G P+ N T GR N+R EI+I
Sbjct: 181 RSVVEYLVESGVPRASFVSVVGAGETQPVADNATADGRAMNRRTEIKI 228
>gi|255624443|ref|XP_002540477.1| Inner membrane lipoprotein yiaD precursor, putative [Ricinus
communis]
gi|223495460|gb|EEF21906.1| Inner membrane lipoprotein yiaD precursor, putative [Ricinus
communis]
Length = 225
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
Q QL D + + + + + V L + + Q +A +L + P +V
Sbjct: 86 NAALQQQLAD--LQAKQTDRGLIITLNDVLFNVDRAELSAEGMRTAQKLADVLLQEPQSV 143
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ ++ TDS GT +NL +SQ RA+ +++ LI I+ RG+ YP+ +N
Sbjct: 144 VLVEGFTDSTGTSSHNLDLSQRRAEAVRNALIGL-GVPGNKIATRGYGEAYPVASNADAG 202
Query: 171 GRQNNQRIEIQIFPRG 186
RQ N+R+EI + G
Sbjct: 203 SRQLNRRVEIVLSQNG 218
>gi|209809374|ref|YP_002264912.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
gi|208010936|emb|CAQ81341.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
Length = 212
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 84/211 (39%), Gaps = 31/211 (14%)
Query: 1 MIKELGLSMFIMTTISGCGL--------------------------ASREKKKVFLHKSN 34
M++ LS+ + GC S+EK +
Sbjct: 1 MLR--VLSLCFSILLVGCTSYSNNLLDTAPKTKEDAPYPTFEDPYVESQEKVIDVVDSKE 58
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV-SRIGDMITCYIPVHVSFVS-EVFLEKKF 92
T + G D + QL GIV D + I V F S + L
Sbjct: 59 VTSALTGPNGELKDDDMRKVAEQLTQMGIVYHEMSDDQLVITIQEKVHFASAQATLTPLA 118
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+L + +I+ P + + HTD G NN +S++R++ ++ YL+ +++++
Sbjct: 119 TSLLNQLISIMATKPELALVLDGHTDISGNAINNQNLSEKRSNEVRRYLLDNNLNASQLY 178
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S RGF P+ N+T +GR+ N+R+EI +
Sbjct: 179 S-RGFGEYLPLCDNETTLGRKCNRRVEITVL 208
>gi|254411320|ref|ZP_05025097.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420]
gi|196181821|gb|EDX76808.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420]
Length = 293
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 70 DMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ +P V F L + +L I L +PS+ I I +HTDS G ++N
Sbjct: 180 QTLKVTLPSDVLFEGNNSLLRPEAGLILDKIIADLRNYPSSTIRIAAHTDSQGEPEDNRE 239
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S RA ++ Y + R++ V G+ P+ NDT +Q N+RIEI +
Sbjct: 240 LSFRRAKAVEQYFARALGDDYRWL-VVGYGEIRPLVANDTDANQQRNRRIEISV 292
>gi|124006808|ref|ZP_01691638.1| OmpA domain protein [Microscilla marina ATCC 23134]
gi|123987489|gb|EAY27198.1| OmpA domain protein [Microscilla marina ATCC 23134]
Length = 570
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT--GIVVSRIGDMITCYIPVHVSFVSE 85
K D D V + D+A +T +S I + + +
Sbjct: 413 EAKMKDKDGDGVADVNDNCPDEAGTLANKGCPETISKAKLSDIQKELARHAHSLHFASGK 472
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
+ + +P L+ I I+ K+P I+ H+D++G NNL +SQ+RA+ ++ Y + G
Sbjct: 473 TTINDESIPDLKAILAIMKKYPKNKFNIEGHSDNVGNAANNLRLSQQRANSVRQYFVNNG 532
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++++R I +G+ P +N T GR+ N+RIE+ +
Sbjct: 533 IAASRLI-AKGYGQTRPEVSNATAAGRKKNRRIEVLVV 569
>gi|311697262|gb|ADQ00134.1| outer membrane protein OprF [marine bacterium HP15]
Length = 374
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 1/147 (0%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQD-TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
D D+ ++ + + + + + + +F
Sbjct: 224 DSDGDGVPDDQDQCAGTDAARVAEVDSVGCLGEVKTLRTEVVSITFPLDSASIPAEFDSE 283
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ IA ++ + TVI I H D+ G N +SQ RA+ + S LI R + I
Sbjct: 284 IDRIAALILENTGTVIEIAGHADASGDSVYNQRLSQRRAESVASALISRNATIADRIKAV 343
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G+ PI TN+T GR+ N+R+E ++
Sbjct: 344 GYGETQPIATNETAQGREMNRRVEARV 370
>gi|227538390|ref|ZP_03968439.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227241772|gb|EEI91787.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 438
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ G L AE + ++ +V ++ I + + +
Sbjct: 295 TPSGTKVDGAGCPLPVAETKVVEKI----VVTEADKKVVDEAIKDLEFDLGKSTIRPTSY 350
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
P L +A++L + + + + HTD+ G+++ NL +S+ERA+ +K+YL +G + +R I
Sbjct: 351 PSLDRVASLLIE-KNFSLKLAGHTDNTGSMQTNLRLSKERAEAVKAYLTSKGANPSR-IE 408
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G+ PI TN T GRQ N+R+E +
Sbjct: 409 ATGYGPNQPIATNATAEGRQQNRRVEFTL 437
>gi|153008551|ref|YP_001369766.1| peptidoglycan-associated lipoprotein [Ochrobactrum anthropi ATCC
49188]
gi|151560439|gb|ABS13937.1| Peptidoglycan-associated lipoprotein [Ochrobactrum anthropi ATCC
49188]
Length = 168
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 55/173 (31%), Gaps = 26/173 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++F+ ++GC
Sbjct: 12 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFT----------------- 54
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + + L A L ++P I ++ H D GT +
Sbjct: 55 -VNVGDRI-------FFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITVEGHADERGTRE 106
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + Q RA + +L RGV +NR ++ + + P+ D N+R
Sbjct: 107 YNLALGQRRAAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADSCWSQNRR 158
>gi|17986623|ref|NP_539257.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1
str. 16M]
gi|23502553|ref|NP_698680.1| Pal family lipoprotein [Brucella suis 1330]
gi|62290567|ref|YP_222360.1| Pal family lipoprotein [Brucella abortus bv. 1 str. 9-941]
gi|82700483|ref|YP_415057.1| outer membrane protein MotY [Brucella melitensis biovar Abortus
2308]
gi|148560405|ref|YP_001259548.1| outer membrane lipoprotein Omp16 [Brucella ovis ATCC 25840]
gi|161619624|ref|YP_001593511.1| peptidoglycan-associated lipoprotein [Brucella canis ATCC 23365]
gi|163845274|ref|YP_001622929.1| peptidoglycan-associated lipoprotein [Brucella suis ATCC 23445]
gi|189024786|ref|YP_001935554.1| outer membrane protein [Brucella abortus S19]
gi|225853150|ref|YP_002733383.1| peptidoglycan-associated lipoprotein [Brucella melitensis ATCC
23457]
gi|237816073|ref|ZP_04595069.1| peptidoglycan-associated lipoprotein [Brucella abortus str. 2308 A]
gi|254694357|ref|ZP_05156185.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 3 str.
Tulya]
gi|254698015|ref|ZP_05159843.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 2 str.
86/8/59]
gi|254703474|ref|ZP_05165302.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 3 str. 686]
gi|254708437|ref|ZP_05170265.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
M163/99/10]
gi|254708710|ref|ZP_05170521.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis B2/94]
gi|254719698|ref|ZP_05181509.1| peptidoglycan-associated lipoprotein [Brucella sp. 83/13]
gi|254730899|ref|ZP_05189477.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 4 str.
292]
gi|256030236|ref|ZP_05443850.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
M292/94/1]
gi|256045306|ref|ZP_05448200.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1
str. Rev.1]
gi|256061733|ref|ZP_05451870.1| peptidoglycan-associated lipoprotein [Brucella neotomae 5K33]
gi|256114264|ref|ZP_05455009.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 3
str. Ether]
gi|256160411|ref|ZP_05458100.1| peptidoglycan-associated lipoprotein [Brucella ceti M490/95/1]
gi|256255617|ref|ZP_05461153.1| peptidoglycan-associated lipoprotein [Brucella ceti B1/94]
gi|256263357|ref|ZP_05465889.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 2
str. 63/9]
gi|256370104|ref|YP_003107615.1| lipoprotein, Pal family [Brucella microti CCM 4915]
gi|260167911|ref|ZP_05754722.1| lipoprotein, Pal family [Brucella sp. F5/99]
gi|260547188|ref|ZP_05822926.1| peptidoglycan-associated lipoprotein [Brucella abortus NCTC 8038]
gi|260565803|ref|ZP_05836286.1| outer membrane lipoprotein omp16 [Brucella melitensis bv. 1 str.
16M]
gi|260568781|ref|ZP_05839249.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 4 str. 40]
gi|260758616|ref|ZP_05870964.1| outer membrane lipoprotein [Brucella abortus bv. 4 str. 292]
gi|260762448|ref|ZP_05874785.1| outer membrane lipoprotein [Brucella abortus bv. 2 str. 86/8/59]
gi|261214665|ref|ZP_05928946.1| outer membrane lipoprotein [Brucella abortus bv. 3 str. Tulya]
gi|261222819|ref|ZP_05937100.1| peptidoglycan-associated lipoprotein [Brucella ceti B1/94]
gi|261315938|ref|ZP_05955135.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
M163/99/10]
gi|261316200|ref|ZP_05955397.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis B2/94]
gi|261325736|ref|ZP_05964933.1| peptidoglycan-associated lipoprotein [Brucella neotomae 5K33]
gi|261754103|ref|ZP_05997812.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 3 str. 686]
gi|261757348|ref|ZP_06001057.1| peptidoglycan-associated lipoprotein [Brucella sp. F5/99]
gi|265984712|ref|ZP_06097447.1| peptidoglycan-associated lipoprotein [Brucella sp. 83/13]
gi|265987263|ref|ZP_06099820.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
M292/94/1]
gi|265991730|ref|ZP_06104287.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1
str. Rev.1]
gi|265995567|ref|ZP_06108124.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 3
str. Ether]
gi|265998778|ref|ZP_06111335.1| peptidoglycan-associated lipoprotein [Brucella ceti M490/95/1]
gi|306837843|ref|ZP_07470705.1| peptidoglycan-associated lipoprotein [Brucella sp. NF 2653]
gi|306841414|ref|ZP_07474116.1| peptidoglycan-associated lipoprotein [Brucella sp. BO2]
gi|61229452|sp|P0A3S7|OMP16_BRUME RecName: Full=Outer membrane lipoprotein omp16; AltName: Full=16.5
kDa minor OMP; Short=16 kDa OMP; AltName: Full=Minor
outer membrane protein omp16; Flags: Precursor
gi|61229453|sp|P0A3S8|OMP16_BRUSU RecName: Full=Outer membrane lipoprotein omp16; AltName: Full=16.5
kDa minor OMP; Short=16 kDa OMP; AltName: Full=Minor
outer membrane protein omp16; Flags: Precursor
gi|61229455|sp|P0A3S9|OMP16_BRUAB RecName: Full=Outer membrane lipoprotein omp16; AltName: Full=16.5
kDa minor OMP; Short=16 kDa OMP; AltName: Full=Minor
outer membrane protein omp16; Flags: Precursor
gi|13898977|gb|AAK48919.1|AF358662_6 Pal protein [Brucella melitensis]
gi|538293|gb|AAA59360.1| Omp16 [Brucella abortus bv. 1]
gi|17982237|gb|AAL51521.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1
str. 16M]
gi|23348553|gb|AAN30595.1| lipoprotein, Pal family [Brucella suis 1330]
gi|62196699|gb|AAX74999.1| lipoprotein, Pal family [Brucella abortus bv. 1 str. 9-941]
gi|82616584|emb|CAJ11663.1| MotY protein:Bacterial outer membrane protein:OmpA/MotB domain
[Brucella melitensis biovar Abortus 2308]
gi|148371662|gb|ABQ61641.1| outer membrane lipoprotein Omp16 (Minor outer membraneprotein
omp16) (16 kDa OMP) (16.5 kDa minor OMP) [Brucella ovis
ATCC 25840]
gi|161336435|gb|ABX62740.1| peptidoglycan-associated lipoprotein [Brucella canis ATCC 23365]
gi|163675997|gb|ABY40107.1| peptidoglycan-associated lipoprotein [Brucella suis ATCC 23445]
gi|189020358|gb|ACD73080.1| Bacterial outer membrane protein [Brucella abortus S19]
gi|225641515|gb|ACO01429.1| peptidoglycan-associated lipoprotein [Brucella melitensis ATCC
23457]
gi|237788736|gb|EEP62948.1| peptidoglycan-associated lipoprotein [Brucella abortus str. 2308 A]
gi|256000267|gb|ACU48666.1| lipoprotein, Pal family [Brucella microti CCM 4915]
gi|260095553|gb|EEW79431.1| peptidoglycan-associated lipoprotein [Brucella abortus NCTC 8038]
gi|260151176|gb|EEW86271.1| outer membrane lipoprotein omp16 [Brucella melitensis bv. 1 str.
16M]
gi|260154165|gb|EEW89247.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 4 str. 40]
gi|260668934|gb|EEX55874.1| outer membrane lipoprotein [Brucella abortus bv. 4 str. 292]
gi|260672874|gb|EEX59695.1| outer membrane lipoprotein [Brucella abortus bv. 2 str. 86/8/59]
gi|260916272|gb|EEX83133.1| outer membrane lipoprotein [Brucella abortus bv. 3 str. Tulya]
gi|260921403|gb|EEX88056.1| peptidoglycan-associated lipoprotein [Brucella ceti B1/94]
gi|261295423|gb|EEX98919.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis B2/94]
gi|261301716|gb|EEY05213.1| peptidoglycan-associated lipoprotein [Brucella neotomae 5K33]
gi|261304964|gb|EEY08461.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
M163/99/10]
gi|261737332|gb|EEY25328.1| peptidoglycan-associated lipoprotein [Brucella sp. F5/99]
gi|261743856|gb|EEY31782.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 3 str. 686]
gi|262553467|gb|EEZ09236.1| peptidoglycan-associated lipoprotein [Brucella ceti M490/95/1]
gi|262766851|gb|EEZ12469.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 3
str. Ether]
gi|263002686|gb|EEZ15089.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1
str. Rev.1]
gi|263093357|gb|EEZ17426.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 2
str. 63/9]
gi|264659460|gb|EEZ29721.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
M292/94/1]
gi|264663304|gb|EEZ33565.1| peptidoglycan-associated lipoprotein [Brucella sp. 83/13]
gi|306288520|gb|EFM59872.1| peptidoglycan-associated lipoprotein [Brucella sp. BO2]
gi|306407082|gb|EFM63299.1| peptidoglycan-associated lipoprotein [Brucella sp. NF 2653]
gi|326409709|gb|ADZ66774.1| Bacterial outer membrane protein [Brucella melitensis M28]
gi|326539416|gb|ADZ87631.1| peptidoglycan-associated lipoprotein [Brucella melitensis M5-90]
Length = 168
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 26/173 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++F+ ++GC
Sbjct: 12 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFT----------------- 54
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + + L A L ++P I I+ H D GT +
Sbjct: 55 -VNVGDRI-------FFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADERGTRE 106
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + Q RA + +L RGV +NR ++ + + P+ D N+R
Sbjct: 107 YNLALGQRRAAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADTCWSQNRR 158
>gi|70729207|ref|YP_258943.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
gi|68343506|gb|AAY91112.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 270
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
S+ + + Q+ + ++ + + + E L+ + + L
Sbjct: 126 SVQQQGKWLEEQIIS--LATTQTDRGLVMTLGDVLFDTGEAELKNSANRTVLKVVQFLQL 183
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P V+ I+ +TD+ G ++NL +S++RA + L+ + I V G+ YP++
Sbjct: 184 NPKRVVRIEGYTDNTGERQSNLQLSKDRAQAVADVLVDL-GIDEKRIQVEGYGDDYPVEA 242
Query: 166 NDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 243 NASERGRAQNRRVEIV 258
>gi|154685777|ref|YP_001420938.1| flagellar motor protein MotB [Bacillus amyloliquefaciens FZB42]
gi|154351628|gb|ABS73707.1| MotB [Bacillus amyloliquefaciens FZB42]
Length = 261
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
+ + + + +T + + + I + F + ++ +P+
Sbjct: 100 AADREELEGVQKQVNQFIKNKKLETQLETKLTKEGLLITIKDSIFFDSGRADIRQEDIPL 159
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ I+ +L P I I HTD++ ++N +S RA + L + +
Sbjct: 160 AKEISNLLVLNPPRNIIISGHTDNVPIKNSQYQSNWHLSVMRAVNFMAILTENPKLDAKV 219
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +GF P +N T GR N+R+E+ I PR
Sbjct: 220 FSAKGFGEYKPAVSNKTAEGRSKNRRVEVLIQPRN 254
>gi|118477164|ref|YP_894315.1| flagellar motor protein MotS [Bacillus thuringiensis str. Al Hakam]
gi|228945331|ref|ZP_04107686.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229183920|ref|ZP_04311136.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1]
gi|301053265|ref|YP_003791476.1| flagellar motor protein [Bacillus anthracis CI]
gi|118416389|gb|ABK84808.1| chemotaxis protein, MotB [Bacillus thuringiensis str. Al Hakam]
gi|228599572|gb|EEK57176.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1]
gi|228814303|gb|EEM60569.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|300375434|gb|ADK04338.1| flagellar motor protein [Bacillus cereus biovar anthracis str. CI]
Length = 227
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 60/144 (41%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D+ + + + + GI V R + + + + ++ + ++ +
Sbjct: 83 MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGF 142
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS + N +S RA + +LI+ ++ ++ G+A
Sbjct: 143 FQSVPN-PIVVEGHTDSRPIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 201
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 202 DTKPVVPNDSPQNWEKNRRVVIYI 225
>gi|110681204|ref|YP_684211.1| OmpA domain-containing protein [Roseobacter denitrificans OCh 114]
gi|109457320|gb|ABG33525.1| OmpA domain protein [Roseobacter denitrificans OCh 114]
Length = 625
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ L + IA +L + +Q HTDS G + N +SQ RA + +
Sbjct: 497 FEPGSATIDAAALTTMDQIADVLRVCGDLKLEVQGHTDSQGREEMNRSLSQARAQSVLNE 556
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L R V ++ FI +G+ PI NDT+ GR+ N+RIE ++
Sbjct: 557 LRARRVLTSNFI-AKGYGESNPIADNDTEEGREANRRIEFKLI 598
>gi|78213752|ref|YP_382531.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like [Synechococcus sp. CC9605]
gi|78198211|gb|ABB35976.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like [Synechococcus sp. CC9605]
Length = 217
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 85/216 (39%), Gaps = 37/216 (17%)
Query: 1 MIKEL-----------GLSMFIMTTISG----------CGLASREKKKVFLHKSNDTDIV 39
M K + +++ +++ +S SRE K + +
Sbjct: 1 MKKNIPLRQSIIRPLPLIAIALISYLSANKLFAGSDNIVANTSREPVKDIKIE---GGLD 57
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVV------SRIGDMITCYIPVHVSF-VSEVFLEKKF 92
++ E + ++ D + ++ D + I + F + L+
Sbjct: 58 YVPSNKEKSESIKELKFRVLDLDYPIIDLYTSTKSQDELLIDISSDILFDFDKSSLKPSA 117
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
P L++ + + + + I+ HTDS G N +S+ RA+ ++ +L++ G ++
Sbjct: 118 FPSLRIASKQITEMARGDVRIEGHTDSKGADAYNQSLSEARAESVRKWLVENGGLTDINF 177
Query: 153 SVRGFAYKYPIDTN------DTKVGRQNNQRIEIQI 182
VRGF PI+ N D GRQ N+R+EI +
Sbjct: 178 VVRGFGETKPIEPNETDKGEDNPAGRQRNRRVEIIV 213
>gi|83589634|ref|YP_429643.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
gi|83572548|gb|ABC19100.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
Length = 256
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 53/140 (37%), Gaps = 6/140 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
++ ++ + V I I + F L+ + +L ++ +L++
Sbjct: 100 QTVKNFLTANGLESEVEVRYEDRGIALDIKERILFDSGRADLKPEARQLLDKLSGLLSRL 159
Query: 107 PSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ + ++ +TD+ N +S RA + Y I+ G+ +P
Sbjct: 160 PN-EVKVEGYTDNRPIHTVQFPTNWELSTARAARVVRYFIEEHHLQPDRFMAIGYGEYHP 218
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
+ ND+ N+R+ + +
Sbjct: 219 LYPNDSPEHMAENRRVVLLL 238
>gi|222086972|ref|YP_002545506.1| peptidoglycan-associated lipoprotein [Agrobacterium radiobacter
K84]
gi|221724420|gb|ACM27576.1| peptidoglycan-associated lipoprotein [Agrobacterium radiobacter
K84]
Length = 177
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 56/173 (32%), Gaps = 25/173 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++F+ +++GC N
Sbjct: 20 IMIALFVGLSLAGCASKKGLPNDANGLGLNGAGSATPGSPQDF----------------- 62
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + L A L ++P+ I ++ H D GT +
Sbjct: 63 TVNVGDRI-------FFDTDSTSIRSDASQTLDRQAQWLARYPNYAITVEGHADERGTRE 115
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + RA K YL RGV + R ++ + + P+ T D N+R
Sbjct: 116 YNLALGARRAAATKDYLASRGVPAQRMKTIS-YGKERPVATCDDISCWSQNRR 167
>gi|88798412|ref|ZP_01113997.1| OmpA/MotB [Reinekea sp. MED297]
gi|88778852|gb|EAR10042.1| OmpA/MotB [Reinekea sp. MED297]
Length = 373
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I V L LQ A L +FP I I++HTDS + NL +S +RA
Sbjct: 250 IDAIQFAVDSAQLNDTSRVRLQEAANTLRQFPDINIQIEAHTDSTASEAYNLSLSDQRAQ 309
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I+ YLI+ + ++ G+ P +N+++ GR N+R+E +
Sbjct: 310 AIRDYLIEL-GIDEQRLTATGYGESQPRASNESEEGRSLNRRVEFR 354
>gi|229172375|ref|ZP_04299934.1| OmpA/MotB domain protein [Bacillus cereus MM3]
gi|228610846|gb|EEK68109.1| OmpA/MotB domain protein [Bacillus cereus MM3]
Length = 227
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 60/144 (41%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D+ + + + + GI V R + + + + ++ + ++ +
Sbjct: 83 MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGF 142
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS + N +S RA + +LI+ ++ ++ G+A
Sbjct: 143 FQSVPN-PIVVEGHTDSRPIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 201
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 202 DTKPVVPNDSPQNWEKNRRVVIYI 225
>gi|228914307|ref|ZP_04077922.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228845301|gb|EEM90337.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 227
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 60/144 (41%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D+ + + + + GI V R + + + + ++ + ++ +
Sbjct: 83 MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGF 142
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS + N +S RA + +LI+ ++ ++ G+A
Sbjct: 143 FQSVPN-PIVVEGHTDSRPIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 201
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 202 DTKPVVPNDSPQNWEKNRRVVIYI 225
>gi|302062033|ref|ZP_07253574.1| ompA family protein [Pseudomonas syringae pv. tomato K40]
Length = 380
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 199
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 200 TRLAKVVEGDQKTAVLILGHADTSGPTEGNQKISQERAQSVAAIFRL-SGLERNRLSQRG 258
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 259 MGAVMPRAANDSLEGRALNRRVEILMTPQDTMR 291
>gi|28871259|ref|NP_793878.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|28854509|gb|AAO57573.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
Length = 381
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 199
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 200 TRLAKVVEGDQKTAVLILGHADTSGPTEGNQKISQERAQSVAAIFRL-SGLERNRLSQRG 258
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 259 MGAVMPRAANDSLEGRALNRRVEILMTPQDTMR 291
>gi|54302322|ref|YP_132315.1| outer membrane protein OmpA [Photobacterium profundum SS9]
gi|46915744|emb|CAG22515.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
SS9]
Length = 324
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 48/100 (48%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L ++ + LQ IA L FP T + + HTDS G N +S+ERA V+ Y
Sbjct: 215 FAFDSDTLSQQDIDQLQPIAQRLVNFPETELFVIGHTDSRGAEAYNQNLSEERAAVVAGY 274
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
L I +G P+ TNDT+ GR N+R+E+
Sbjct: 275 LATHFGIEQSRIQAQGRGELEPVATNDTEDGRGQNRRVEV 314
>gi|49079216|gb|AAT49867.1| PA1041 [synthetic construct]
Length = 211
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 69/202 (34%), Gaps = 23/202 (11%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF------------- 54
+ + ++GC + T SS
Sbjct: 10 LILVSGLLTGCAGLQKSDWPTCAAVGGVTGAGLGAIESSSWAGWGALIGGGVGAAYCWVH 69
Query: 55 ---------QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN- 104
Q + + T + ++ L IA L
Sbjct: 70 GAGEQVAPPPPQPVEEVAPPPPVVKEETIVVRDLHFAFDSSKVDAADSEKLNGIAERLKG 129
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ ST ++I HTDS+G+ N +S+ RA+ + +YLI GV S+ + V+G P+
Sbjct: 130 EAASTRLSITGHTDSVGSDAYNQKLSERRANAVANYLIDAGVPSSIIVGVQGLGESQPVA 189
Query: 165 TNDTKVGRQNNQRIEIQIFPRG 186
N T+ GR N+R+EI I G
Sbjct: 190 DNKTREGRAENRRVEILIKREG 211
>gi|119357876|ref|YP_912520.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
DSM 266]
gi|119355225|gb|ABL66096.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 337
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 54/109 (49%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ ++ P L IA ++ P+ + + HTD++G + N+ +S+
Sbjct: 227 RVSLYGIYFDTNKSDIKPASSPALVEIAKLMKSQPALKLHVVGHTDNVGGYEFNMGLSKR 286
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RAD + + L++ + ++ G AY P+ N T+ GR N+R+E+
Sbjct: 287 RADAVVASLVRNHGIAPARLAANGVAYLAPVAPNTTEAGRAKNRRVELV 335
>gi|294850947|ref|ZP_06791623.1| outer membrane lipoprotein omp16 [Brucella sp. NVSL 07-0026]
gi|294821590|gb|EFG38586.1| outer membrane lipoprotein omp16 [Brucella sp. NVSL 07-0026]
Length = 168
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 26/173 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++F+ ++GC
Sbjct: 12 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFT----------------- 54
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + + L A L ++P I I+ H D GT +
Sbjct: 55 -VNVGDRI-------FFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADERGTRE 106
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + Q RA + +L RGV +NR ++ + + P+ D N+R
Sbjct: 107 YNLALGQRRATATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADTCWSQNRR 158
>gi|154490982|ref|ZP_02030923.1| hypothetical protein PARMER_00899 [Parabacteroides merdae ATCC
43184]
gi|154088730|gb|EDN87774.1| hypothetical protein PARMER_00899 [Parabacteroides merdae ATCC
43184]
Length = 278
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 6/153 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
+R + L+ +D + V + + + F ++K+ L
Sbjct: 117 AQTERVQNLLNSVKDALLG-FSSDELTVREKDGKVYVAMSDKLLFESGSARVDKRGKEAL 175
Query: 97 QLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+A +LNK + I+ HTDS K+N +S RA + L + I
Sbjct: 176 AKLAEVLNKQSDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTKDYGVKPLQI 235
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+ N+T GR N+R EI + P+
Sbjct: 236 QPCGRGEFMPVADNETADGRAKNRRTEIIMAPK 268
>gi|107026300|ref|YP_623811.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116692511|ref|YP_838044.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|170738239|ref|YP_001779499.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia
MC0-3]
gi|105895674|gb|ABF78838.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116650511|gb|ABK11151.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
gi|169820427|gb|ACA95009.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia
MC0-3]
Length = 163
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 59/182 (32%), Gaps = 22/182 (12%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K +++ ++GC A++ + ++ V L+
Sbjct: 1 MSKMNRIAVLATFVLLAGCHNAAKTPENAAAAPEPSSETVATVTADDLNNPNSPLAK--- 57
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ ++ +F +LQ A L P+ + IQ +TD
Sbjct: 58 -----------------RSIYFDFDQYSVKPEFQSLLQAHADYLRSHPARRVLIQGNTDE 100
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + Q R+ + S ++ + + P+ + N+R +
Sbjct: 101 RGTSEYNLALGQRRSQAVAS-ALETLGVPATQLEAVSLGKEKPVALGHDEEAWAQNRRAD 159
Query: 180 IQ 181
+
Sbjct: 160 LV 161
>gi|87122282|ref|ZP_01078164.1| OmpA family protein [Marinomonas sp. MED121]
gi|86162425|gb|EAQ63708.1| OmpA family protein [Marinomonas sp. MED121]
Length = 204
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 58/109 (53%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + ++ F L+ +A+ L K P++ + I+ HTD++G+ +N +S +RA I
Sbjct: 74 VLFDTGKHEVKPAFYSELRELASFLKKNPASSVIIEGHTDNVGSKTSNQTLSFQRASAIA 133
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ + + + + +GF PI +N+T GR+ N+R+ ++F R
Sbjct: 134 AVITDKFKIAPNRVQAKGFGETSPIASNETHSGREANRRVVAEVFSRQT 182
>gi|15595276|ref|NP_248768.1| hypothetical protein PA0078 [Pseudomonas aeruginosa PAO1]
gi|116054405|ref|YP_788234.1| hypothetical protein PA14_00925 [Pseudomonas aeruginosa UCBPP-PA14]
gi|254243187|ref|ZP_04936509.1| hypothetical protein PA2G_03990 [Pseudomonas aeruginosa 2192]
gi|296386560|ref|ZP_06876059.1| hypothetical protein PaerPAb_00450 [Pseudomonas aeruginosa PAb1]
gi|9945903|gb|AAG03468.1|AE004447_1 hypothetical protein PA0078 [Pseudomonas aeruginosa PAO1]
gi|115589626|gb|ABJ15641.1| hypothetical protein PA14_00925 [Pseudomonas aeruginosa UCBPP-PA14]
gi|126196565|gb|EAZ60628.1| hypothetical protein PA2G_03990 [Pseudomonas aeruginosa 2192]
Length = 449
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFP 107
+ ++ + V D I F S + +F P+L IA L K
Sbjct: 307 RLARFLADDIKAQRVAVEDAVDRSVVTIRGDELFASASASVRDEFQPLLLRIADALRKVK 366
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + H+D+ +N +SQ RA + L + R + G + P+
Sbjct: 367 G-QVLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGDAGR-FTAEGRSDTEPV 424
Query: 164 DTNDTKVGRQNNQRIEIQIFPRG 186
TN + GR N+R+EI +F G
Sbjct: 425 ATNASAEGRARNRRVEITVFAEG 447
>gi|313205418|ref|YP_004044075.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312444734|gb|ADQ81090.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 598
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY-IPVH 79
+S + + S + D +LD + + +SR ++ +
Sbjct: 434 SSSTQGNKVVENSVNVDSDGDGTPDNLDMCPNLAGVASNRGCPEISRRIILLFIKALTGI 493
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L+K+ +L IA L K P+ I + HTDS G + N L+S+ RA +++
Sbjct: 494 KFDSGKDKLKKRSYTILNEIAKELIKNPAYFIEVHGHTDSKGNSRANKLLSELRASAVRN 553
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
YLI+RGV NR SV G+ K P+ TN T GR N+R+E +
Sbjct: 554 YLIRRGVDGNRIKSV-GYGDKMPVATNKTVKGRTLNRRVEFNVT 596
>gi|167034765|ref|YP_001669996.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166861253|gb|ABY99660.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 270
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + + + L+ + + L P V+ I+ +TDS G ++
Sbjct: 144 EQTDRGLVMTLGDVLFDTGSADLKNSASRTVLKLVQFLQLNPRRVVRIEGYTDSTGLAED 203
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL +S++RA + L+ + + V G+ +YPI+ N ++ GR N+R+EI
Sbjct: 204 NLKLSRDRAQSVADMLVDL-GIDEKRLQVEGYGDQYPIEANASERGRAQNRRVEIV 258
>gi|327399144|ref|YP_004340013.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411]
gi|327181773|gb|AEA33954.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411]
Length = 188
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
Query: 2 IKELGLSMFIMTTISG---CGLASREKKKVFLHKSNDTDIVNKRFGS-SLDKAEDEFQMQ 57
+K + + + ++ + G C + + K ++ N+ I + SL+ E
Sbjct: 1 MKRVIIVLILIVGLFGIYGCSSSPKYVKSQSQNEVNNPQIKSSTLKYPSLNTIEGSDFAS 60
Query: 58 LQDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+D ++ I + +++ + +K +L IA + K P+ + I+ +
Sbjct: 61 FEDAKKHFDKVAVDIHFKFNSFEIEPINQYGINEKPKAILDRIAAFMLKHPTLKVRIEGN 120
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
D GT++ NL + Q+RA K YL+ +GV+ +R I + + P+D + N+
Sbjct: 121 CDERGTVEYNLALGQKRALAAKKYLVAKGVNPDR-IDIISYGESRPLDPAHNEYAWAKNR 179
Query: 177 RIEIQIFPR 185
R + R
Sbjct: 180 RDHFVLLER 188
>gi|52842007|ref|YP_095806.1| flagellar motor protein MotD [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629118|gb|AAU27859.1| flagellar motor protein MotB [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 273
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 9/177 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--EFQMQLQDTGIVVSRIGDMITCYIP- 77
+ K D K G+ D ++ + +L+D ++R + I
Sbjct: 66 KDQNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKA 125
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQER 133
+ ++ + L L +A + P + ++ +TD+ +N +S R
Sbjct: 126 GSLFDSGSADIKPEALIKLMKLAEKIKNLP-FTVVVEGYTDNVPIETPQYPSNWELSAAR 184
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + ++ +N I V G+ +YPI N T+ GR N+R+ I I + +
Sbjct: 185 AATVGR-ILNGFGIANHRILVTGYGDQYPITDNYTEAGRSQNRRVNILITKNRKVDR 240
>gi|53802737|ref|YP_115490.1| outer membrane protein MopB [Methylococcus capsulatus str. Bath]
gi|4104020|gb|AAD01925.1| MopB [Methylococcus capsulatus]
gi|53756498|gb|AAU90789.1| outer membrane protein MopB [Methylococcus capsulatus str. Bath]
Length = 348
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 9/146 (6%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D LDK + G V G +I + L +L
Sbjct: 207 DSDGDGVNDCLDKCPGTMK------GAKVDSDGCLIRIELHGVNFKYDSAELTDSAKRIL 260
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
A L FP I + HT + GT + N+ +S RA + YL +GV + +
Sbjct: 261 DETAENLILFPEKRDIEVAGHTSTEGTNEYNMRLSIRRAHSVADYLKAKGV--TNQLYPK 318
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G+ +YP+ ++ R+ N+R+E+
Sbjct: 319 GYGEEYPLVPEHSEADREKNRRVELI 344
>gi|312884285|ref|ZP_07743994.1| hypothetical protein VIBC2010_10946 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368058|gb|EFP95601.1| hypothetical protein VIBC2010_10946 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 125
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L + L +A LN++P++ +AI +TDS G NL +S+ RA +
Sbjct: 17 SGTFEFDSCKLTQSVAERLDNLANFLNEYPTSRVAITGYTDSSGPAAYNLKLSEMRAQAV 76
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K YLI ++ G P+ N T GR+ N+R+E+ I
Sbjct: 77 KDYLISA-GIEEARLTATGLGENNPVADNCTHEGREKNRRVEVVI 120
>gi|189349521|ref|YP_001945149.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
gi|221201005|ref|ZP_03574045.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
multivorans CGD2M]
gi|221206543|ref|ZP_03579556.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
multivorans CGD2]
gi|221214397|ref|ZP_03587368.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
multivorans CGD1]
gi|189333543|dbj|BAG42613.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
gi|221165654|gb|EED98129.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
multivorans CGD1]
gi|221173852|gb|EEE06286.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
multivorans CGD2]
gi|221178855|gb|EEE11262.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
multivorans CGD2M]
Length = 169
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 66/183 (36%), Gaps = 20/183 (10%)
Query: 1 MIKELGLSMFIMT--TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K++ L++ +M ++ C + K + + ++D
Sbjct: 2 MSKKVRLALAVMMIGALAACKSGVKLDDKANAGAMSTQPSADNVAQVNVDPL-------- 53
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
++ ++ P+LQ A L P + IQ +TD
Sbjct: 54 ---------NDPNSPLAKRSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTD 104
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + NL + Q+RA+ ++ L GV+ ++ +V + P T + N+R
Sbjct: 105 ERGTSEYNLALGQKRAEAVRRALALLGVADSQMEAVS-LGKEKPQATGHDEASWAQNRRA 163
Query: 179 EIQ 181
++
Sbjct: 164 DLV 166
>gi|34556944|ref|NP_906759.1| lipoprotein precursor [Wolinella succinogenes DSM 1740]
gi|34482659|emb|CAE09659.1| LIPOPROTEIN PRECURSOR [Wolinella succinogenes]
Length = 170
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 66/187 (35%), Gaps = 20/187 (10%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L + S+ + ++GC K K S +D +
Sbjct: 1 MKKFLVIGSLAAVMLMTGCSQKGSAVSDSADSK-VSGMTSGKDNFSDMDAKSALIRE--- 56
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL--NKFPSTVIAIQSHT 117
+ + + + P++ A +L K + I+ +T
Sbjct: 57 ------------LESQLKSVYFDFDKFNIRADMQPVVDGDAKVLTSAKAKGLTVKIEGNT 104
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + N + +RA ++ L+ +GV ++ + + + P+ +K N+R
Sbjct: 105 DEWGTDEYNYALGLKRAVAVRDALVAKGVDQSKTMLIS-YGESKPVCQEKSKECWAKNRR 163
Query: 178 IEIQIFP 184
++ ++ P
Sbjct: 164 VDFKLLP 170
>gi|254689864|ref|ZP_05153118.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 6 str.
870]
gi|256258118|ref|ZP_05463654.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 9 str.
C68]
gi|260755394|ref|ZP_05867742.1| OmpA family protein [Brucella abortus bv. 6 str. 870]
gi|260884410|ref|ZP_05896024.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 9 str.
C68]
gi|297248966|ref|ZP_06932674.1| outer membrane lipoprotein omp16 [Brucella abortus bv. 5 str.
B3196]
gi|260675502|gb|EEX62323.1| OmpA family protein [Brucella abortus bv. 6 str. 870]
gi|260873938|gb|EEX81007.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 9 str.
C68]
gi|297174099|gb|EFH33456.1| outer membrane lipoprotein omp16 [Brucella abortus bv. 5 str.
B3196]
Length = 168
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 26/173 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++F+ ++GC
Sbjct: 12 IVIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFT----------------- 54
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + + L A L ++P I I+ H D GT +
Sbjct: 55 -VNVGDRI-------FFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADERGTRE 106
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + Q RA + +L RGV +NR ++ + + P+ D N+R
Sbjct: 107 YNLALGQRRAAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADTCWSQNRR 158
>gi|313204239|ref|YP_004042896.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312443555|gb|ADQ79911.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 410
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 4/166 (2%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE-DEFQMQLQDTGIVVSRIGDMITCYIP 77
+ + + D+ + DKA+ + + D +T +
Sbjct: 245 AIEDENAANKAKIQKLEADLQAANAERAADKAKLQADLKDIPQAKVSADSNQDALTVLLD 304
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
V+ F L + +L +A +L + + I HTD+IG K N +S+ERA
Sbjct: 305 VNFEF-GSSELSSRSRAILDDVALVLKVNKAWSKLLISGHTDNIGGDKANKKLSEERAAG 363
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+K YLI + S I V GF + P TN+TK GR N+R E+ I
Sbjct: 364 VKKYLISK-GISASVIDVAGFGKEKPKTTNETKEGRYKNRRAELVI 408
>gi|258626845|ref|ZP_05721652.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM603]
gi|262165947|ref|ZP_06033684.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus
VM223]
gi|262171200|ref|ZP_06038878.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus
MB-451]
gi|258580892|gb|EEW05834.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM603]
gi|261892276|gb|EEY38262.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus
MB-451]
gi|262025663|gb|EEY44331.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus
VM223]
Length = 173
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 67/181 (37%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ + ++ C + + + V+ + L+ + +L++
Sbjct: 6 VLKGLLIALPV-LAVTACSSS--DDAANASGSQTNQSAVSTVDSNGLNAQGQLTEQELKE 62
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A L K PS + I+ H D
Sbjct: 63 QALRENQT----------IYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTIEGHADER 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + ++ + +S+ + + P+ ++ N+R +
Sbjct: 113 GTPEYNIALGERRAQAVAK-YLEALGVQSGQLSIVSYGEEKPLVLGQSEDAYAKNRRAVL 171
Query: 181 Q 181
Sbjct: 172 V 172
>gi|258544708|ref|ZP_05704942.1| outer membrane protein A [Cardiobacterium hominis ATCC 15826]
gi|258520045|gb|EEV88904.1| outer membrane protein A [Cardiobacterium hominis ATCC 15826]
Length = 201
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 3/128 (2%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST--VIAIQ 114
Q + V + + + L+ LQ +A LN+ + I +
Sbjct: 59 QAPEPAPPVMEMQREVITLGTDTYFDFDKSNLKPAGKQALQDLAGQLNQRGANIQKITVV 118
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTDS GT N +S+ RA + +YL + ++ I G +P+ TN T GR
Sbjct: 119 GHTDSKGTDAYNQKLSERRASTVANYLAEN-GVPSQLIEAYGQGESHPVATNKTAEGRAQ 177
Query: 175 NQRIEIQI 182
N+R+E+ +
Sbjct: 178 NRRVEVNV 185
>gi|254511628|ref|ZP_05123695.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
gi|221535339|gb|EEE38327.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
Length = 634
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L IA IL + + IQ HTDS G + N +SQ RA I +
Sbjct: 499 FEPGSATVVADSRAALDQIADILRECGPIRLEIQGHTDSQGREEMNQQLSQARAQSILNE 558
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L R V ++ S G+ PI NDT+ GR+ N+RIE +
Sbjct: 559 LRGRRVPTSS-FSAVGYGETLPIADNDTEDGREANRRIEFLLI 600
>gi|261417296|ref|YP_003250979.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373752|gb|ACX76497.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325429|gb|ADL24630.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 659
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 7/130 (5%)
Query: 62 GIVVSRIGDMITCYIPVHVSFVS------EVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
G+ V + G + + L K L IA ++ K P + +Q
Sbjct: 531 GVRVDQNGCPLNKKEDLDQLKKGINFKTASARLTKSSYGTLDDIAELMIKIPEANLEVQG 590
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD+ G+ K N +S++RA + YL+++ + + G+ + PI N GR N
Sbjct: 591 HTDNKGSEKRNKKLSEDRAAAVVKYLVKK-GVAKDRLRAAGYGSEKPIADNTDAAGRAQN 649
Query: 176 QRIEIQIFPR 185
+R+E+ F +
Sbjct: 650 RRVELVPFSK 659
>gi|167770207|ref|ZP_02442260.1| hypothetical protein ANACOL_01550 [Anaerotruncus colihominis DSM
17241]
gi|167667529|gb|EDS11659.1| hypothetical protein ANACOL_01550 [Anaerotruncus colihominis DSM
17241]
Length = 321
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 9/181 (4%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
++ G K L + F + + Q + + +S+ +
Sbjct: 72 LLTATGDMPPPGDKESL--ERTDQQMPANFDELYEYLKSYAASQGMEDSVQISKGDGRVY 129
Query: 74 CYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS--TVIAIQSHTDSIGTLKNN---- 126
++ F + P+L + LN ++ I HT ++ +
Sbjct: 130 IRFQNNLFFAPDSAAILADAYPLLDFLGDCLNAVDDEILLVNINGHTAAVPNGETYQVSD 189
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
++S ERA I YL + + + G+ +P+ NDT GR+ N+R++I I
Sbjct: 190 WMLSSERASNIAIYLDDKKDVDPKKLRPMGYGKNFPVADNDTIAGREENRRVDIVIISNQ 249
Query: 187 N 187
+
Sbjct: 250 S 250
>gi|78062395|ref|YP_372303.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77970280|gb|ABB11659.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 163
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 58/176 (32%), Gaps = 21/176 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ + ++GC A++ + + + ++ V L+
Sbjct: 7 FAVLATVVLLAGCHHAAKTPENAGMAPTPSSEAVATVTADELNNPNSPLAK--------- 57
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ ++ ++ +LQ A L PS + IQ +TD GT +
Sbjct: 58 -----------RSIYFDFDQYSVKPEYQSLLQAHADYLRSHPSRHVLIQGNTDERGTSEY 106
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL + Q R+ + S ++ + + P+ + N+R ++
Sbjct: 107 NLALGQRRSQAVMS-GLETLGVPATQLEAVSLGKEKPVALGHDEDSWAQNRRADLV 161
>gi|331007788|ref|ZP_08330902.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma
proteobacterium IMCC1989]
gi|330418397|gb|EGG92949.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma
proteobacterium IMCC1989]
Length = 171
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 60/180 (33%), Gaps = 19/180 (10%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK + + ++ C ++ + D
Sbjct: 11 IKTSFIVLAAAAFLTACSSTGTQEDAGSTTNVANNDPAPVVT--------------TGSN 56
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G V+ + V L +L A L P + ++ H D G
Sbjct: 57 GSDVNS--GSVAPKASVFYFDFDSSALRADSRSLLDAHAAALKAKPRA-VRLEGHADERG 113
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
T + N+ + + RA +++YL+ RGV+S I V + + P Q N+R+EI+
Sbjct: 114 TREYNIALGERRAQSVRAYLLSRGVTSP--IEVISYGEEKPAANASNDYAWQQNRRVEIK 171
>gi|54297693|ref|YP_124062.1| flagellar motor protein MotD [Legionella pneumophila str. Paris]
gi|53751478|emb|CAH12896.1| hypothetical protein lpp1744 [Legionella pneumophila str. Paris]
Length = 273
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 9/177 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--EFQMQLQDTGIVVSRIGDMITCYIP- 77
+ K D K G+ D ++ + +L+D ++R + I
Sbjct: 66 KDQNKATQSTDNIKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKA 125
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQER 133
+ ++ + L L +A + P + ++ +TD+ +N +S R
Sbjct: 126 GSLFDSGSADIKPEALIKLMKLAEKIKNLP-FTVVVEGYTDNVPIETPQYPSNWELSAAR 184
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + ++ +N I V G+ +YPI N T+ GR N+R+ I I + +
Sbjct: 185 AATVGR-ILNGFGIANHRILVTGYGDQYPITDNYTEAGRSQNRRVNILITKNRKVDR 240
>gi|37528060|ref|NP_931405.1| hypothetical protein plu4224 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787497|emb|CAE16596.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 558
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 49/106 (46%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L+ + +L + P ++ I HTDS G N +S RA ++
Sbjct: 441 SLFDVGQSRLKPEAAKVLVNALIEIKAKPEWMVVITGHTDSTGDAVKNRELSLARAKAVR 500
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+++Q S V+G PI TN T VGR N+R+EI + P
Sbjct: 501 DWILQTSDVSPTCFVVKGEGATQPIATNTTAVGRAVNRRVEISLMP 546
>gi|284007877|emb|CBA73797.1| peptidoglycan-associated lipoprotein [Arsenophonus nasoniae]
Length = 180
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 22/177 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ M ++ C K + D++ ++ + +LQ
Sbjct: 21 VLKGLMLALP-MLAVAACSSKKGNDKTGTENNVADSNASLSA-----EQLAHQQMQELQS 74
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + ++ +L AT L PS I ++ H D
Sbjct: 75 NNI---------------VYFGFDKYDVTPEYAQLLDQHATFLRGNPSVKITVEGHADEK 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + + RA+ + +Q + I++ + + P + N+R
Sbjct: 120 GTPEYNIALGERRANAV-KMYLQSKGVNGEQIAIVSYGKEKPAVLGHDESAYAKNRR 175
>gi|167563920|ref|ZP_02356836.1| outer membrane protein, OmpA family [Burkholderia oklahomensis
EO147]
gi|167571055|ref|ZP_02363929.1| outer membrane protein, OmpA family [Burkholderia oklahomensis
C6786]
Length = 170
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 62/184 (33%), Gaps = 21/184 (11%)
Query: 1 MIKELGLSMFIMT--TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K+L L+ ++ ++ C + + + T +
Sbjct: 2 MSKKLRLAFAVLMIGALAACKSGVKLDEHANQGGAVSTQPNPENVAQ------------- 48
Query: 59 QDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + D ++ ++ +LQ A L P I IQ +T
Sbjct: 49 ----VTVDPLNDPNSPLAKRSVYFDFDSYSVQDQYQALLQQHAQYLKGHPQRHILIQGNT 104
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ + ++ + + P+ + N+R
Sbjct: 105 DERGTSEYNLALGQKRAEAVRR-ALSLLGVTDSQMEAVSLGKEKPVALGHDEASWAQNRR 163
Query: 178 IEIQ 181
++
Sbjct: 164 ADLV 167
>gi|149916697|ref|ZP_01905199.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149822414|gb|EDM81803.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 520
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 5/176 (2%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI--VVSRIGDMITCY 75
C + + + D D + + +D+ E + + G V T
Sbjct: 339 CPYEAGVEPDGCPIRDTDGDGILDDTDACIDEPE-KVNGYKDEDGCPDEVPIAVREFTGV 397
Query: 76 IPVHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I + + + K +L +L ++P I + HTD+ GT + N +S +RA
Sbjct: 398 IEGIEFEYNSATIREGKSKEVLDAAIKVLEEYPEIRIKVVGHTDNQGTPEYNKKLSTDRA 457
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
D +K YL + + I G P+ TN+T+ GR N+R E +I + ++
Sbjct: 458 DAVKQYLAEG-GIAEDRIETFGAGQSDPLTTNETEEGRAKNRRTEFEIIKKAKPER 512
>gi|300722398|ref|YP_003711684.1| hypothetical protein XNC1_1421 [Xenorhabdus nematophila ATCC 19061]
gi|297628901|emb|CBJ89484.1| required for outer membrane integrity, uptake of group A colicins,
and translocation of phage DNA [Xenorhabdus nematophila
ATCC 19061]
Length = 176
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 20/181 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ IM ++ C + D L + + +LQ+
Sbjct: 15 VLKGLMLALPIM-ALAACSANKAGNSDQSNVGTVDNSAKASLSAEELARQQ---MQELQN 70
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + +F ML A L PS + I+ H D
Sbjct: 71 NNI---------------VYFGFDKYDINSEFAQMLDKHAAFLRTNPSVKVTIEGHADER 115
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S +++ + + P + N+R I
Sbjct: 116 GTPEYNIALGERRANAV-KMYLQGKGVSADQLAIVSYGKEKPAVLGHDEAAYAKNRRAVI 174
Query: 181 Q 181
Sbjct: 175 V 175
>gi|229096214|ref|ZP_04227187.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29]
gi|229102326|ref|ZP_04233035.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28]
gi|229115169|ref|ZP_04244579.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3]
gi|228668309|gb|EEL23741.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3]
gi|228681227|gb|EEL35395.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28]
gi|228687174|gb|EEL41079.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29]
Length = 213
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D+ + + + + GI V R + + + + ++ + ++ +
Sbjct: 69 MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIMSQLVGF 128
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS N +S RA + +LI+ ++ ++ G+A
Sbjct: 129 FQSVPN-PIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 187
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 188 DTKPVVPNDSPQNWEKNRRVVIYI 211
>gi|119357899|ref|YP_912543.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
DSM 266]
gi|119355248|gb|ABL66119.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 417
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
V + L L I IL +P+ + I +TD++G + N +SQ R
Sbjct: 307 FSFDRLVFDTGKSTLMATSQEQLNNIGEILKAYPAVELKIGGYTDNVGDPQANKKLSQAR 366
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
A+ + + L+ + N ++ G+ ++P+ N T+ GRQ N+R++ ++ +
Sbjct: 367 AETVMAELV-KLGIDNIRLAAEGYGIEHPVADNATEEGRQQNRRVDCRVTKK 417
>gi|331006223|ref|ZP_08329545.1| Outer membrane protein [gamma proteobacterium IMCC1989]
gi|330419980|gb|EGG94324.1| Outer membrane protein [gamma proteobacterium IMCC1989]
Length = 338
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ S D IT + + + +LP ++ +AT + ++P+ I HTD
Sbjct: 205 AGNCVKKSVSTDKITLKVE---FASNSDKVPSAYLPEIENLATFMQQYPTATAVIGGHTD 261
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S G+ + N +SQ R + + L +S G+ PI NDT V R N+R+
Sbjct: 262 STGSAEYNQSLSQRRVNEVARLLSANYGVDASRVSAIGYGEAQPIAGNDTAVDRAKNRRV 321
Query: 179 EIQIF 183
E I
Sbjct: 322 EASIT 326
>gi|290957838|ref|YP_003489020.1| hypothetical protein SCAB_33721 [Streptomyces scabiei 87.22]
gi|260647364|emb|CBG70469.1| putative secreted protein [Streptomyces scabiei 87.22]
Length = 206
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 67/163 (41%), Gaps = 2/163 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + S + + + + ++ + +T +
Sbjct: 40 GTVTTSPPPEVDANSPALKLAQGATLAPAKVLDIKSVVEDLGGEERREDTNENVTFALQA 99
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V F + L + +Q IA + K + + + TD++G+ + L +S++RA+ +
Sbjct: 100 EVLFPKNSAKLNPQARSRIQTIAEEIKKQDAVKVRVFGFTDNLGSYAHGLTLSKKRAEAV 159
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
L+ + N VRG++ YPI N T+ GR+ N+R+E+
Sbjct: 160 HD-LLATDLDGNVTFEVRGYSEDYPIADNATEEGRKKNRRVEV 201
>gi|325275390|ref|ZP_08141334.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
gi|324099474|gb|EGB97376.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
Length = 270
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + + + L+ + + L P V+ I+ +TDS GT +
Sbjct: 144 EQADRGLVMTLGDVLFDTGSANLKNTASRTVLKLVQFLQLNPHRVVRIEGYTDSTGTPEE 203
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL +S +RA + L+ GV R + V G+ +YPI+ N ++ GR N+R+EI
Sbjct: 204 NLKLSHDRAQSVADMLVDLGVDEKR-LQVEGYGDQYPIEANASERGRAQNRRVEIV 258
>gi|222054709|ref|YP_002537071.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221563998|gb|ACM19970.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 474
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
G+ K ++ + D V++I + + + ++ ++ + +
Sbjct: 326 ADNGTEAGKQKNRRIDAIIDCAFDVTKISPPERLCMSLLMEFETGRAEIQPRYHDEIAKV 385
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A + ++P+T I+ HTD+ GT N +SQERA+ + +YL+++ +S +G+
Sbjct: 386 AEYMKRYPTTTALIEGHTDNTGTADFNQKLSQERAENVVNYLVEKLGIERSRLSAKGYGA 445
Query: 160 KYPIDTNDTKVGRQNNQRI 178
+ N T GR+ N+RI
Sbjct: 446 SRRLAYNTTAEGRKKNRRI 464
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 57/102 (55%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + + + + + + ++P T I+ HTD++GT ++NL +S+ RA+ + +Y
Sbjct: 243 FDIDKALIRAEDHREIARVGEFMQRYPDTTAVIEGHTDNVGTDEHNLDLSRRRAESVTNY 302
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + +S G+ +K+P+ N T+ G+Q N+RI+ I
Sbjct: 303 LVDKFGIDRSRLSSTGYGFKHPVADNGTEAGKQKNRRIDAII 344
>gi|217978498|ref|YP_002362645.1| type IV / VI secretion system protein, DotU family [Methylocella
silvestris BL2]
gi|217503874|gb|ACK51283.1| type IV / VI secretion system protein, DotU family [Methylocella
silvestris BL2]
Length = 494
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 6/143 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL 103
+ L + ++ + ++ I + V F + ++ +F P+ + IA L
Sbjct: 349 TQLQRIRLALAPEIAAKKVDATQTATKIRIIVGDLVLFPSGQANVKPQFEPIAKRIAQTL 408
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS----NRFISVRGFAY 159
K P I I HTD++ + S + ++ + + I V G A
Sbjct: 409 EKEPGA-ITIVGHTDNVKLQATSPFDSNWTLSMARAKAVAAVLKPGLSEPARIEVDGKAD 467
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
+ PI NDT GR N+R+EI +
Sbjct: 468 EQPIAPNDTPAGRAQNRRVEIML 490
>gi|148839593|sp|A3M8K2|OMP38_ACIBT RecName: Full=Outer membrane protein omp38; Flags: Precursor
gi|193078282|gb|ABO13246.2| outer membrane protein A [Acinetobacter baumannii ATCC 17978]
Length = 356
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 208 APVEPTPVTPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 267
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 268 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 327
Query: 175 NQRI 178
N+R+
Sbjct: 328 NRRV 331
>gi|187922763|ref|YP_001894405.1| peptidoglycan-associated lipoprotein [Burkholderia phytofirmans
PsJN]
gi|187713957|gb|ACD15181.1| peptidoglycan-associated lipoprotein [Burkholderia phytofirmans
PsJN]
Length = 169
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 60/184 (32%), Gaps = 21/184 (11%)
Query: 1 MIKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M+ +L ++ ++ ++ C + + + +
Sbjct: 1 MMSKLRFAFAVLMVGALAACHSGVKLDENANKGGTVSAQPNPNDVAT------------- 47
Query: 59 QDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + D ++ + +LQ A L P + IQ +T
Sbjct: 48 ----VNVDPLNDPNSPLAKRSIYFDFDSYSVKDDYQSLLQQHAQYLKSHPQRHVLIQGNT 103
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ + ++ + + P T + N+R
Sbjct: 104 DERGTSEYNLALGQKRAEAVRR-SLSLMGVTDSQMEAVSLGKEKPQATGHDESSWAQNRR 162
Query: 178 IEIQ 181
++
Sbjct: 163 ADLV 166
>gi|146298460|ref|YP_001193051.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146152878|gb|ABQ03732.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 487
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 66/189 (34%), Gaps = 17/189 (8%)
Query: 9 MFIMTTISGCGLASREK--------KKVFLHKSNDT----DIVNKRFGSSLDKAEDEFQM 56
+ + + GC + V K N D D
Sbjct: 290 VAGLAALKGCPDTDGDGIADKDDKCPTVAGPKENGGCPFLDADKDGVLDKDDDCPTVPGP 349
Query: 57 QLQDTGIVVSRIG-DMITCYIPVHVSFVSEVFLEKKFLPM---LQLIATILNKFPSTVIA 112
VS + + + + L I IL +P+ +
Sbjct: 350 ASNRGCPEVSSQALEDLKVQARAIYFNSGKATFKTGDKETPARLDAIKEILKNYPNAKFS 409
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD+ G+ K N +SQ+RA+ + + L++R + + +GF P+ +N T G+
Sbjct: 410 IEGHTDNTGSAKINDKLSQDRANAVLNALVER-GVNPENLEAKGFGSSQPVASNKTAAGK 468
Query: 173 QNNQRIEIQ 181
N+R EI+
Sbjct: 469 AQNRRTEIK 477
>gi|148546407|ref|YP_001266509.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148510465|gb|ABQ77325.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 325
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLE 89
I K + LD+ E + + ++D+ + + R +++ +PV S+ + L
Sbjct: 81 GPVVPKIDQKATQAWLDEYEPKLREAIKDSKLELERRDNVLAVTLPVDSSYNPDRPNMLL 140
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L + +A + P T + + H DS G N +S ERA + + G+ +
Sbjct: 141 PMSLGPITRVAKTVEGDPKTAVLVLGHADSSGAAVANQKLSLERAASVSAIFRLSGLQRD 200
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
R ++++G P ND+ GR N+R+E+ + P+ +
Sbjct: 201 R-LTLKGMGSVMPRAANDSAEGRALNRRVEMLLTPQNTM 238
>gi|302670731|ref|YP_003830691.1| flagellar motor protein MotB [Butyrivibrio proteoclasticus B316]
gi|302395204|gb|ADL34109.1| flagellar motor protein MotB [Butyrivibrio proteoclasticus B316]
Length = 277
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 6/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
+K + E + + + ++ + I + F +V ++ +P++ + IL +
Sbjct: 129 EKIQAELEEGDIEDVVSLNYTSQFVQLTIQGSILFDSGKVEIKSDAIPVIDKVGQILESY 188
Query: 107 PSTVIAIQSHTD-----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ I+ HTD S G NN +S RA + +YL++ + G
Sbjct: 189 AGGTVDIEGHTDNVPMSSGGKYANNDELSSGRALAVFNYLVENTTLDPANLIHTGRGEYD 248
Query: 162 PIDTNDTKVGRQNNQRIEIQI 182
PI N T GR N+R+EI+I
Sbjct: 249 PIADNSTDEGRSRNRRVEIKI 269
>gi|94264078|ref|ZP_01287877.1| OmpA/MotB [delta proteobacterium MLMS-1]
gi|93455494|gb|EAT05684.1| OmpA/MotB [delta proteobacterium MLMS-1]
Length = 235
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNKF 106
+ F+ + + V + I I V ++ F +L + I+
Sbjct: 70 KPIQQVFEDLQEAGLVTVEDQEEEILVRIQDAVAFDTGRAEIKGDFRELLDQLGEIIYDS 129
Query: 107 PSTVIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
ST++ ++ HTD++ +N +S RA + YLI ++ A
Sbjct: 130 QSTMV-VEGHTDNVPLRPGAPFASNWELSSARAVAVVEYLINEHNIPRDRLAAVAHADGK 188
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P+ TNDT GR N+R+E +I P +++
Sbjct: 189 PVATNDTAEGRAANRRVEFRIRPGEDLR 216
>gi|94270700|ref|ZP_01291804.1| OmpA/MotB [delta proteobacterium MLMS-1]
gi|93450704|gb|EAT01786.1| OmpA/MotB [delta proteobacterium MLMS-1]
Length = 227
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNKF 106
+ F+ + + V + I I V ++ F +L + I+
Sbjct: 62 KPIQQVFEDLQEAGLVTVEDQEEEILVRIQDAVAFDTGRAEIKGDFRELLDQLGEIIYDS 121
Query: 107 PSTVIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
ST++ ++ HTD++ +N +S RA + YLI ++ A
Sbjct: 122 QSTMV-VEGHTDNVPLRPGAPFASNWELSSARAVAVVEYLINEHNIPRDRLAAVAHADGK 180
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P+ TNDT GR N+R+E +I P +++
Sbjct: 181 PVATNDTAEGRAANRRVEFRIRPGEDLR 208
>gi|307718609|ref|YP_003874141.1| hypothetical protein STHERM_c09210 [Spirochaeta thermophila DSM
6192]
gi|306532334|gb|ADN01868.1| hypothetical protein STHERM_c09210 [Spirochaeta thermophila DSM
6192]
Length = 243
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 8/157 (5%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE-KKFLPMLQ 97
+ + KA FQ +++ + V + + + F S L + L
Sbjct: 87 GRALDQARKKAISAFQPEIRAKTVRVKQDERGLVITLAADAFFRSASAELNIEAARETLI 146
Query: 98 LIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS----YLIQRGVSSNRF 151
++ +L + I I+ HTD + T S ++ + +
Sbjct: 147 KLSNLLTSPELEGRKIRIEGHTDDVPTDPAGPWPSNWELSSARAINVLHFLSDYGVDENH 206
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
V G A P+ N T GR N+RI+I I G++
Sbjct: 207 FQVMGLADTVPLADNSTPEGRAYNRRIDIVILSEGHL 243
>gi|255530070|ref|YP_003090442.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255343054|gb|ACU02380.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 445
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 62/159 (38%), Gaps = 3/159 (1%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
S E K D +K G+ A D L + +T
Sbjct: 286 KSVEDLKKDSDGDGVADQFDKCPGTPAGTAVDGSGCPLPKAPEPTVKDQSTLT-GFETIQ 344
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ P L ++++L + + ++ + S GT NL +S++RA+ +
Sbjct: 345 FEFNSSVLKTDSYPTLDKLSSVLRENGG-KVTVKGYASSEGTAAYNLKLSKDRANSV-KT 402
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ + + +G+ PI +NDT+ GR N+R+E
Sbjct: 403 YLVNSGVNASQVVTKGYGEANPIASNDTEEGRIQNRRVE 441
>gi|170724840|ref|YP_001758866.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169810187|gb|ACA84771.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 201
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 71/180 (39%), Gaps = 10/180 (5%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLH-----KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ + +T ++GC + ND D V +
Sbjct: 2 RTFILILSVTLLAGCSMRDIATMDGATTQVHDLNDNDRDGVIVARERCTETVGGATIDNY 61
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I + + +++ + +++IAT + +FP+T + I+ H
Sbjct: 62 GCGKIKPINERQELKI-----LFPNDSYYIDPMYYDQVEIIATFMRQFPNTKVTIEGHCS 116
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ ++NL +SQ RA+ + + L +R ++ G+++ PID ++T + N+R+
Sbjct: 117 KTGSYEHNLALSQNRANAVTTALSERFGIEPDRLTAIGYSFDRPIDLSETAMAHTRNRRV 176
>gi|313497490|gb|ADR58856.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 325
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLE 89
I K + LD+ E + + ++D+ + + R +++ +PV S+ + L
Sbjct: 81 GPVVPKIDQKATQAWLDEYEPKLREAIKDSKLELERRDNVLAVTLPVDSSYNPDRPNMLL 140
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L + +A + P T + + H DS G N +S ERA + + G+ +
Sbjct: 141 PMSLGPITRVAKTVEGDPKTAVLVLGHADSSGAAVANQKLSLERAASVSAIFRLSGLQRD 200
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
R ++++G P ND+ GR N+R+E+ + P+ +
Sbjct: 201 R-LTLKGMGSVMPRAANDSAEGRALNRRVEMLLTPQNTM 238
>gi|255021344|ref|ZP_05293392.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus
ATCC 51756]
gi|254969207|gb|EET26721.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus
ATCC 51756]
Length = 279
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 59/176 (33%), Gaps = 7/176 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A+ K + N + E Q ++D + + + +
Sbjct: 91 AATPSVAKGVVSPKAQAPKSNTDLQQLQKQMEKLLQPLIRDGSVAIHSSALGVVIDLNAK 150
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERA 134
+ F + L + L IA IL P I + T+ + +N +S RA
Sbjct: 151 ILFPSGQATLTPEAQQNLAAIAKILKTVP-YQIQVNGFTNDLPIRTAQFPSNWYLSAARA 209
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ I + + G+ +PI+ N+T G N+R+ I + N K
Sbjct: 210 VAVTELFIAE-GVNPEHLVAAGYGQYHPIEPNNTAAGLAMNRRVSIVVVAPQNPSK 264
>gi|149192088|ref|ZP_01870312.1| peptidoglycan-associated lipoprotein [Vibrio shilonii AK1]
gi|148834074|gb|EDL51087.1| peptidoglycan-associated lipoprotein [Vibrio shilonii AK1]
Length = 174
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 67/181 (37%), Gaps = 13/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ K L +++ + ++ C + ++++ + +D+ + +L++
Sbjct: 6 VFKGLLIALPV-LAMTACSSTD-DAASSTGAETSNQQQQETVVATPIDENAQLSEQELKE 63
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A L+K PS + I+ H D
Sbjct: 64 KALRENQT----------IYFAFDNSTIAGDYEDMLAAHAAYLSKDPSLKVTIEGHADER 113
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + IQ IS+ + + P+ ++ N+R +
Sbjct: 114 GTPEYNIALGERRAQAVAK-YIQALGVQADQISIVSYGEEKPLVLGQSEDAYAKNRRAVL 172
Query: 181 Q 181
Sbjct: 173 V 173
>gi|330830039|ref|YP_004392991.1| chemotaxis protein MotB [Aeromonas veronii B565]
gi|328805175|gb|AEB50374.1| Chemotaxis protein MotB [Aeromonas veronii B565]
Length = 291
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIAT 101
+ K E + + Q++ + V ++G + I F FL+ +F+P++ IA
Sbjct: 133 VQVTKQKLEQQLKAQIESKDLEVEQLGSQLVIRIGEKALFPADSAFLQPQFIPLVNKIAG 192
Query: 102 ILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IL P + + HTD+ +NN +S RA I ++ R + +G
Sbjct: 193 ILANIPG-QVVVTGHTDNSQAPVELYRNNWELSVLRASSIVQTMLTNPQLDARRVIAQGV 251
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
A P NDT RQ N+R++I +
Sbjct: 252 ADTQPRFANDTPEHRQANRRVDITL 276
>gi|4580965|gb|AAD24552.1|AF117960_1 OprF [Pseudomonas agarici]
Length = 322
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 46/102 (45%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P T ++ +TD++GT N +S+ RA +
Sbjct: 218 DVKFDFDKSVVKPNSYADIKNLADFMKQYPQTSTVVKGYTDNVGTDAYNQKLSERRAHAV 277
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
L + +S G+ P +N TK G+ N+R+E
Sbjct: 278 AQVLTNQYGVEQSRVSSLGYGKNNPAASNATKEGQAINRRVE 319
>gi|320538203|ref|ZP_08038098.1| OmpA family protein [Treponema phagedenis F0421]
gi|1399286|gb|AAB03251.1| MotB [Treponema phagedenis]
gi|320145020|gb|EFW36741.1| OmpA family protein [Treponema phagedenis F0421]
Length = 238
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 73/197 (37%), Gaps = 16/197 (8%)
Query: 5 LGLSMFIMTTISGCGLASREKKK-------VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+ + + +ISG + + + K+ G++L KA F +
Sbjct: 41 ITILQSMAASISGDPTGGGQSVSIGRLEDLGNTINAMPSLEKGKKLGTALKKAVSLFAPE 100
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLE-KKFLPMLQLIATIL--NKFPSTVIAI 113
++ I V+ + + F L+ ++ L IA L + +
Sbjct: 101 IKTNKIAVTSDERGLVISLAADAFFHRDSSDLDIEETRESLLHIARFLSDKELEGRRFRV 160
Query: 114 QSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ HT + ++ +S +RA + + + + SV G+A P +NDT
Sbjct: 161 EGHTSTSEVAASKEIDDWQLSSQRAINVL-HYLTDFGAEESRFSVAGYADTRPKASNDTA 219
Query: 170 VGRQNNQRIEIQIFPRG 186
GR N+R++I I G
Sbjct: 220 EGRAYNRRVDIIILDEG 236
>gi|319793927|ref|YP_004155567.1| type IV / vi secretion system protein, dotu family [Variovorax
paradoxus EPS]
gi|315596390|gb|ADU37456.1| type IV / VI secretion system protein, DotU family [Variovorax
paradoxus EPS]
Length = 458
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 67/169 (39%), Gaps = 7/169 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-V 78
++ ++++ + ++ ++ + V
Sbjct: 275 TSADVEQRIAAIGRMRPPPAPPAPAVKPLRLKELLASEIARGTVSVDEDEHRSAVSFRGD 334
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERA 134
+ + L K LP+L +A +N+ + + H+D+ NN ++S++RA
Sbjct: 335 DMFVPGQARLNAKILPVLDKVADEINQVSG-SVQVTGHSDNRPIKTREFPNNQVLSEKRA 393
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
D + + L+ +GV ++R I G P+ + T GR N+R++I +
Sbjct: 394 DAVTAVLLGKGVVASR-IRTEGRGDTMPVADSATAAGRARNRRVDIVVI 441
>gi|290474098|ref|YP_003466974.1| outer membrane integrity protein [Xenorhabdus bovienii SS-2004]
gi|289173407|emb|CBJ80184.1| required for outer membrane integrity, uptake of group A colicins,
and translocation of phage DNA [Xenorhabdus bovienii
SS-2004]
Length = 167
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 20/181 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ IM ++ C + D L + + +LQ+
Sbjct: 6 VLKGLMLALPIM-AVAACSTNKNGNNDQSGVGTVDNSAKAGLSAEELARQQ---MQELQN 61
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + F ML A L PS + I+ H D
Sbjct: 62 NNI---------------VYFGFDKYDINSDFAQMLDAHAVFLRSNPSIKVTIEGHADER 106
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S +++ + + P + N+R I
Sbjct: 107 GTPEYNIALGERRANAV-KMYLQGKGVSADQLAIVSYGKEKPAVLGHDEAAYSKNRRAVI 165
Query: 181 Q 181
Sbjct: 166 V 166
>gi|149925042|ref|ZP_01913359.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica
SIR-1]
gi|149814084|gb|EDM73711.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica
SIR-1]
Length = 233
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 71/183 (38%), Gaps = 13/183 (7%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
++ + + CG + D V + + V+
Sbjct: 11 MAALLCLPMVACG--------PTIFADADALTVVGEPPPPPPPPPEPEPEPEPPKRVEVT 62
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKN 125
+ V + + + ++ I + P ++++ HTDS G+ +
Sbjct: 63 ASA---IVINEKILFEVDKAEIRSESFSLMDEITKVFIDNPRIKKVSVEGHTDSDGSSRY 119
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +SQ+RAD + +YL++ GV+ R + G + PI NDT G++ N+R+E I +
Sbjct: 120 NKKLSQKRADSVMAYLVEHGVAQER-LEAVGHGEEKPIADNDTDEGKEKNRRVEFIILEQ 178
Query: 186 GNI 188
+
Sbjct: 179 DEM 181
>gi|187477844|ref|YP_785868.1| outer membrane protein A [Bordetella avium 197N]
gi|585615|sp|Q05146|OMPA_BORAV RecName: Full=Outer membrane protein A; Flags: Precursor
gi|144052|gb|AAA22979.1| outer membrane protein A [Bordetella avium]
gi|115422430|emb|CAJ48955.1| outer membrane protein A [Bordetella avium 197N]
Length = 194
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + +L +A I +TDSIGT N+ +S+ RA +
Sbjct: 86 DTFFDFDKSTLKPEGRQLLDQVAQQARAIDLETIIAVGNTDSIGTEAYNMKLSERRAASV 145
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + I G PI +N T GR N+R+EI+I
Sbjct: 146 KAYLVSK-GIDPNRIYTEGKGKLNPIASNKTAEGRARNRRVEIEIV 190
>gi|258545330|ref|ZP_05705564.1| OmpA family protein [Cardiobacterium hominis ATCC 15826]
gi|258519433|gb|EEV88292.1| OmpA family protein [Cardiobacterium hominis ATCC 15826]
Length = 244
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 83/214 (38%), Gaps = 38/214 (17%)
Query: 1 MIK-ELGLSM-FIMTTISGCGLASRE----KKKVFLHKSNDTDIVNKRFG---------- 44
M K LGL I+GC A + + + G
Sbjct: 21 MKKSNLGLVAGLSAMMIAGCETAGGGFGGMANQSTAMGTAIGALAGGVVGHQIDDDKGRY 80
Query: 45 --------------SSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFV-SEVFL 88
+ +D+ +++ Q Q+ ++G+ V R+ + I I V F + +
Sbjct: 81 IGAVAGALAGAAIGNYMDRQQEQLQQQVANSGVQVQRVNESTIQLNIQSEVLFDVDKAVI 140
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ F L IA L ++P TV+ + TD G+ ++NL +SQ RA + + + +
Sbjct: 141 KPNFYQPLGSIAQTLQQYPETVVHVYGFTDGSGSPQHNLQLSQRRAQSVAQ-YLAQQGIN 199
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ V+G+ +Y + ++R+ I I
Sbjct: 200 SQRFVVQGYGEQY-----ASAENNPQDRRVAIYI 228
>gi|254457130|ref|ZP_05070558.1| OmpA/MotB [Campylobacterales bacterium GD 1]
gi|207085922|gb|EDZ63206.1| OmpA/MotB [Campylobacterales bacterium GD 1]
Length = 407
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 8/169 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
C + K D D +S D + G V+ G +
Sbjct: 247 ACLTTAVGKTVDAKGCEIDGDDDKDGVLNSKDICPNTPI------GDAVNSDGCPAKITL 300
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + +++ A LN + S I +TDS G+ N +S++RA+
Sbjct: 301 HVK-FENNSDVVNTSSYDIIEKYADFLNNYSSYSAKIIGYTDSKGSANYNQKLSEKRANA 359
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
IKS L+++GV ++R SV G P+ N TK GR N+RIE ++ +
Sbjct: 360 IKSMLLEKGVPADRLSSV-GMGESNPVADNSTKEGRAQNRRIEAELTKK 407
>gi|254467574|ref|ZP_05080983.1| YceI like family [Rhodobacterales bacterium Y4I]
gi|206684322|gb|EDZ44806.1| YceI like family [Rhodobacterales bacterium Y4I]
Length = 327
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I S L+ L ++ I+ + P ++ + HTDS G N+ +S
Sbjct: 215 EILSQGRSVNFAPSTARLDASSRDFLNSLSDIIRRCPGMIVEVGGHTDSQGKAAWNMALS 274
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++RA + YL ++G+ S R ++V G+ P+ N+T R N+RIE ++
Sbjct: 275 EKRAAAVNQYLQKKGIPSERLVAV-GYGETTPLVPNNTAQNRAKNRRIEFKVLN 327
>gi|323963914|gb|EGB59407.1| OmpA family protein [Escherichia coli M863]
Length = 160
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 64/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLIFTSLVLTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ G R ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEALSLKRANVVADAWAMGGQIPRRNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|261211899|ref|ZP_05926186.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp.
RC341]
gi|260839249|gb|EEX65881.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp.
RC341]
Length = 172
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 64/181 (35%), Gaps = 15/181 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ + ++ C + V+ + L+ + +L++
Sbjct: 6 VLKGLLIALPV-LAVTACSSSDDAANSGSQTNQA---AVSTVDSNGLNAQGQLTEQELKE 61
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A L K PS + ++ H D
Sbjct: 62 QALRENQT----------IYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTVEGHADER 111
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + ++ IS+ + + P+ ++ N+R +
Sbjct: 112 GTPEYNIALGERRAQAVSK-YLEALGVQAGQISIVSYGEEKPLVLGQSEEAYAKNRRAVL 170
Query: 181 Q 181
Sbjct: 171 V 171
>gi|229132541|ref|ZP_04261390.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196]
gi|228650887|gb|EEL06873.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196]
Length = 225
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 63/150 (42%), Gaps = 9/150 (6%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIV---VSRIGDMITCYIPVH-VSFVSEVFLEKKFLPML 96
+D+ + + + + G+ V R ++ I + + + ++ + ++
Sbjct: 75 AVSKKRMDELYKKLKAYVDNNGVSQVNVYREDTGVSIVIVDNLIFDTGDANVKPEAKEVI 134
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFI 152
+ P+ I ++ HTDS N +S RA + +LI+ ++ +
Sbjct: 135 SQLVGFFQSVPN-PIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRL 193
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G+A P+++ND+ + N+R+ I I
Sbjct: 194 AAVGYADTKPVESNDSPQNWEKNRRVVIYI 223
>gi|226944060|ref|YP_002799133.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii
DJ]
gi|226718987|gb|ACO78158.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii
DJ]
Length = 215
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 6/186 (3%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVN---KRFGSSLDKAEDEFQMQLQDTGIV 64
++ + I+ C ++++ + + + N + + + E + ++ +
Sbjct: 9 TLILCMAITACSTTGKQERVGAQAGRSGSSVANFESRESRAWVADHEASVREAVKGSQFE 68
Query: 65 VSRIGDMITCYIPVHVSFVSE--VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V R GD++ PV SF + L L L +A + + + + H DS G+
Sbjct: 69 VERRGDLLVVTAPVDSSFNPDRPSMLLVATLGPLSRVAKLAAQDREVAVLLLGHGDSSGS 128
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +SQERA + + G+ +R + +G P +N K GR N+R+E+ +
Sbjct: 129 AELTNRLSQERAQSMAAIFRMSGLHHDRLMY-KGMGSDVPRSSNANKDGRSLNRRVEMYL 187
Query: 183 FPRGNI 188
R ++
Sbjct: 188 TTRSSL 193
>gi|255533625|ref|YP_003093997.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255346609|gb|ACU05935.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 679
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 7/118 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + ++ L + L + TI+ P+ I + SHTDS G N+ +S+ R
Sbjct: 563 IVLKDVLYEFNKADLTEDSKGKLDYLYTIMVDNPTIEIELSSHTDSKGGEAYNMDLSERR 622
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQIFPR 185
A YLI + ++ +G+ PI N D GR N+R E ++ +
Sbjct: 623 AKSCVDYLIGK-GIPKNRMTSKGYGKTRPIAPNEFPNGKDNPAGRALNRRTEFKVTKK 679
>gi|291286065|ref|YP_003502881.1| type I secretion outer membrane protein, TolC family [Denitrovibrio
acetiphilus DSM 12809]
gi|290883225|gb|ADD66925.1| type I secretion outer membrane protein, TolC family [Denitrovibrio
acetiphilus DSM 12809]
Length = 666
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 66/172 (38%), Gaps = 7/172 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-----DM 71
GC ++ I K +L+ E + V +G +
Sbjct: 491 GCADNENVSIGYSAPENAPAYIKPKESALTLEP-ESLGEPVSLGEPEKVDSMGFDASAEE 549
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
T + ++ L K P++ IA L + I HTDS G + N +S
Sbjct: 550 QTVNFSNILFKLNSSKLTKDSYPVVDAIAAKLKTMEGYTLQIVGHTDSSGNAEFNKKLSA 609
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
ERA + + L+++ I+ G + P+ +N T+ GR N+RIE ++
Sbjct: 610 ERAKSVYNRLVRK-GVPKENITTYGKGEELPLYSNATRDGRVKNRRIEFKLT 660
>gi|320106352|ref|YP_004181942.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4]
gi|319924873|gb|ADV81948.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4]
Length = 284
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 72/200 (36%), Gaps = 31/200 (15%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ---------------- 57
++ A + + + + ++ + + D
Sbjct: 68 ALAPSAGAMGKPTPIAMPTPMTPEAAARKEAADKKRIYDALAQMAVPQKNQNLPPLGAKP 127
Query: 58 -------LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPST 109
+ + + + + F L +P+L+ IA L P
Sbjct: 128 PSPEKRGTAISAVSFRSEPEGLVLSLQDAGFFNSGSAALRADAIPVLERIAASL---PMG 184
Query: 110 VIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+ ++ HTD++ +N +S RA+ I L+ R + + ++V G+A +PI +
Sbjct: 185 PLRVEGHTDNVAIHTALYASNWELSTARANAIARVLLARSLVNPASLAVAGYAEFHPISS 244
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
N T+ GR N+R++I + +
Sbjct: 245 NSTEEGRAKNRRVDIVLLKQ 264
>gi|332852270|ref|ZP_08434075.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013150]
gi|332870493|ref|ZP_08439257.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013113]
gi|332729400|gb|EGJ60740.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013150]
gi|332732230|gb|EGJ63498.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013113]
Length = 353
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 205 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 264
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 265 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 324
Query: 175 NQRI 178
N+R+
Sbjct: 325 NRRV 328
>gi|239501745|ref|ZP_04661055.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
baumannii AB900]
Length = 349
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 201 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 260
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 261 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 320
Query: 175 NQRI 178
N+R+
Sbjct: 321 NRRV 324
>gi|169794817|ref|YP_001712610.1| putative Outer membrane protein precursor (OmpA-like)
[Acinetobacter baumannii AYE]
gi|213157857|ref|YP_002320655.1| outer membrane protein A [Acinetobacter baumannii AB0057]
gi|215482363|ref|YP_002324545.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
baumannii AB307-0294]
gi|301345435|ref|ZP_07226176.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
baumannii AB056]
gi|301512590|ref|ZP_07237827.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
baumannii AB058]
gi|301595016|ref|ZP_07240024.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
baumannii AB059]
gi|169147744|emb|CAM85607.1| putative Outer membrane protein precursor (OmpA-like)
[Acinetobacter baumannii AYE]
gi|213057017|gb|ACJ41919.1| outer membrane protein A [Acinetobacter baumannii AB0057]
gi|213988159|gb|ACJ58458.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
baumannii AB307-0294]
Length = 353
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 205 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 264
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 265 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 324
Query: 175 NQRI 178
N+R+
Sbjct: 325 NRRV 328
>gi|163866830|gb|ABY47585.1| outer membrane protein A [Acinetobacter baumannii]
Length = 341
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 205 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 264
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 265 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 324
Query: 175 NQRI 178
N+R+
Sbjct: 325 NRRV 328
>gi|163866828|gb|ABY47584.1| outer membrane protein A [Acinetobacter baumannii]
Length = 333
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 205 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 264
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 265 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 324
Query: 175 NQRI 178
N+R+
Sbjct: 325 NRRV 328
>gi|129307156|gb|ABO30516.1| outer membrane protein A [Acinetobacter baumannii]
Length = 337
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 205 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 264
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 265 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 324
Query: 175 NQRI 178
N+R+
Sbjct: 325 NRRV 328
>gi|90021493|ref|YP_527320.1| NAD-dependent DNA ligase [Saccharophagus degradans 2-40]
gi|89951093|gb|ABD81108.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 195
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 70/188 (37%), Gaps = 6/188 (3%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-DTG 62
L + + GC A+ + ND ++V+ + + A + +T
Sbjct: 8 SLIVIASATSFTVGCSTANTD--TAGTENQNDYELVSMKIDQDVYNATGGKSAVVSVETP 65
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSI 120
+ IT V L + L+ +A + + V+ ++ D+
Sbjct: 66 AEQEQPKQEITHIEDVVYFEFDSKELTAEAEQKLEKLANEAKKSENENIVVVLKGFADAT 125
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + N +S+ERA + ++ R +V P+ NDTK GR N+R+ +
Sbjct: 126 GPEEYNQELSKERAQNV-KAFLESNGVEAREYNVVALGESNPVADNDTKQGRAQNRRVVL 184
Query: 181 QIFPRGNI 188
I P ++
Sbjct: 185 VIEPTESV 192
>gi|21666310|gb|AAM73654.1|AF390104_1 outer membrane protein HMP [Acinetobacter baumannii]
Length = 346
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 205 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 264
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 265 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 324
Query: 175 NQRI 178
N+R+
Sbjct: 325 NRRV 328
>gi|89073281|ref|ZP_01159811.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
gi|89050991|gb|EAR56455.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
Length = 326
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 4/132 (3%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
A E + + + + + + + +P + L L + +
Sbjct: 184 ATVEIKETINVNQVTIVTLEE-LRLTVP---FAFDSSTITTDDAAKLAPFEQRLKEQDTA 239
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I + HTDS G+ N +S++RA+ + L Q + I +G P+ +N T+
Sbjct: 240 KIYVVGHTDSRGSESYNQTLSEKRAEAVADTLRQHLNLDSSRIIAQGRGESDPVASNQTE 299
Query: 170 VGRQNNQRIEIQ 181
GR N+R++I
Sbjct: 300 DGRSQNRRVDII 311
>gi|123443145|ref|YP_001007119.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|238752128|ref|ZP_04613611.1| Peptidoglycan-associated lipoprotein [Yersinia rohdei ATCC 43380]
gi|238765244|ref|ZP_04626173.1| Peptidoglycan-associated lipoprotein [Yersinia kristensenii ATCC
33638]
gi|332160930|ref|YP_004297507.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|122090106|emb|CAL12969.1| peptidoglycan-associated lipoprotein Pal [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|238696516|gb|EEP89304.1| Peptidoglycan-associated lipoprotein [Yersinia kristensenii ATCC
33638]
gi|238709705|gb|EEQ01940.1| Peptidoglycan-associated lipoprotein [Yersinia rohdei ATCC 43380]
gi|318604837|emb|CBY26335.1| 18k peptidoglycan-associated outer membrane lipoprotein;
Peptidoglycan-associated lipoprotein precursor; Outer
membrane protein P6; OmpA/MotB precursor [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325665160|gb|ADZ41804.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330864066|emb|CBX74143.1| peptidoglycan-associated lipoprotein [Yersinia enterocolitica
W22703]
Length = 168
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 58/181 (32%), Gaps = 19/181 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + I+ C + S ++ +LQ
Sbjct: 6 VLKGLMLALPV-LAIAACSSNKSANNDQSGMGAGTGTENGSNLSS--EEQARLQMQELQK 62
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + F ML A L PS + ++ H D
Sbjct: 63 NNI---------------VYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER 107
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 108 GTPEYNIALGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVL 166
Query: 181 Q 181
Sbjct: 167 V 167
>gi|146307342|ref|YP_001187807.1| hypothetical protein Pmen_2317 [Pseudomonas mendocina ymp]
gi|145575543|gb|ABP85075.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 453
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 56/145 (38%), Gaps = 7/145 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V D I + + P+L IA + +
Sbjct: 311 RLARFLEDDIRAQRVAVEDAVDRSVVTIRGDELFASGSASISDNLQPLLLRIAEAIRQVK 370
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + H+D +N +SQ+RA + L R R + G + P+
Sbjct: 371 G-NVLVTGHSDDRPIATLRYPSNWKLSQDRAQQVMDVLAARSGQPER-FTAEGRSDTEPV 428
Query: 164 DTNDTKVGRQNNQRIEIQIFPRGNI 188
+N++ GR N+R+EI +F GN+
Sbjct: 429 ASNESAAGRARNRRVEITVFAEGNL 453
>gi|319778087|ref|YP_004134517.1| type IV / vi secretion system protein, dotu family [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317171806|gb|ADV15343.1| type IV / VI secretion system protein, DotU family [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 498
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 9/159 (5%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ + +D+ ++ G+ + GD I I + F + +F
Sbjct: 341 PAKVAPPAANAQIDRIRAALAKDVEGGGLAIGTKGDFIVVEINNLLLFQSGRAETKPEFQ 400
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE-----RADVIKSYLIQRGVSS 148
P+ IA L P I I HTD++ +++ S RA +++ + +
Sbjct: 401 PIAADIAAALEHEPG-PIRIVGHTDNVKPRRSSAFKSNFDLSLARAKAVEALMAAKFSDP 459
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+R ++V G PI N T GR N+R+++ I PR
Sbjct: 460 SR-LTVDGKGEDEPIAENATPEGRARNRRVDVMI-PREE 496
>gi|260774918|ref|ZP_05883819.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609173|gb|EEX35331.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC
BAA-450]
Length = 321
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 7/168 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY----- 75
+ + + T +FG S ++AE Q ++ V +
Sbjct: 146 TDIDIDTHGISGNAVTLGFTTKFGGSDEQAEAPAQEEMLVEETVEETVVVKPVFQTFESE 205
Query: 76 -IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ L + L+ +A+ + ++P + + +TD+ G N +S++RA
Sbjct: 206 VVYSVSFKFDSAELTPESEMALKEVASFMGEYPQATVDVVGYTDTSGPAVYNQKLSEQRA 265
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + GV+ +R I V G PI TN+T+ GR N+R E+ +
Sbjct: 266 QSVADVIAEYGVNQSR-IHVEGAGESNPIATNETRDGRIENRRAEVTV 312
>gi|116048976|ref|YP_792222.1| hypothetical protein PA14_50810 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296390590|ref|ZP_06880065.1| hypothetical protein PaerPAb_20651 [Pseudomonas aeruginosa PAb1]
gi|115584197|gb|ABJ10212.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 293
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 10/174 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G AS+ K L + K LD E + + + + R + +
Sbjct: 121 GASSASKASGKPAL-------VQQKVTKEWLDTHEKALREAIAGSEFTLERRDNALIVIA 173
Query: 77 PVHVSFVSE--VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
P SF + L L L +A + P + I + HTDS G+ N +S ERA
Sbjct: 174 PADYSFNPKRHTMLMPITLNPLGKVAKMAQADPQSGILVLGHTDSTGSKAVNDKLSFERA 233
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ + + ++G P N + GR N+R+E+ R ++
Sbjct: 234 QSVAAIFRL-SGLKGDQLRLKGVGSDMPRADNASAAGRAQNRRVEVLYTQRASL 286
>gi|134294581|ref|YP_001118316.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
gi|134137738|gb|ABO53481.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
Length = 319
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 10/161 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLD---KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ K +H + +SL+ ++ ++ + G++ + +
Sbjct: 164 EVKGEVHNEAQRQQLASDMANSLNPTYTIKNGLRVSASEQGVLDQTLANRTIE------F 217
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL
Sbjct: 218 ETGSATLTPQGKQILDQMAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYL 277
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I + + ++ G PI NDT GR N+RIE ++
Sbjct: 278 ITK-GIQPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRV 317
>gi|307826004|ref|ZP_07656218.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307732979|gb|EFO03842.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 266
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI---VVSRIGDMITCYIPVHV 80
+KV L ++ + +KR L DE +++ +D I ++ I + +
Sbjct: 89 TSRKVDLARATASQTASKRAFEELSAKRDEIRLKARDAEIARLKAKKVPQGILVTLGDVL 148
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ L + + L T++ I+ HTD+ G+ N +SQ RA+ ++++
Sbjct: 149 FDTARSDLKAGSLQNIYPLVEYLKVHADTMVKIEGHTDNQGSSDYNAQLSQRRAEAVRNF 208
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L+ GV+ R I+ +G YPI TN + GRQ N+R+E+ I
Sbjct: 209 LVTNGVAPER-ITAQGMGKDYPIATNSSAAGRQQNRRVEVTIT 250
>gi|298506340|gb|ADI85063.1| peptidoglycan-associated lipoprotein [Geobacter sulfurreducens
KN400]
Length = 187
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 8/186 (4%)
Query: 2 IKELGLSMFIMTTIS---GCGLAS---REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+K + ++ + +I+ GC E V +++D E
Sbjct: 1 MKYVHATLLVAFSIACAAGCAKKELVVPEPAVVSAPAQLPATETVALPATTIDAHESIAA 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + I + + + + L +L A L K P + ++
Sbjct: 61 TDIAEDRITPAGNATQASP-LKIVYFDFDAWVLNGAAREILAGNAEWLRKNPGVAVILEG 119
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD G+ NL + ++RA YL G+ + R +V + + P + N
Sbjct: 120 HTDERGSDAYNLALGEQRAKSAMKYLQTLGIDAGRM-TVVSYGEEKPAVEGHDESAWAGN 178
Query: 176 QRIEIQ 181
+R+E
Sbjct: 179 RRVEFI 184
>gi|254700357|ref|ZP_05162185.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 5 str. 513]
gi|261750850|ref|ZP_05994559.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 5 str. 513]
gi|261740603|gb|EEY28529.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 5 str. 513]
Length = 168
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 26/173 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++F+ ++GC
Sbjct: 12 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFT----------------- 54
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + + L A L ++P I I+ H D GT +
Sbjct: 55 -VNVGDRI-------FFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADERGTRE 106
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + Q RA + +L RGV +NR ++ + + P+ D N+R
Sbjct: 107 YNLALGQRRAAATRDFLASRGVPANRMRTIS-YGNERPVAVCDADTCWSQNRR 158
>gi|206970743|ref|ZP_03231695.1| putative chemotaxis protein MotB [Bacillus cereus AH1134]
gi|218233445|ref|YP_002366413.1| flagellar motor protein MotS [Bacillus cereus B4264]
gi|218896660|ref|YP_002445071.1| putative chemotaxis protein MotB [Bacillus cereus G9842]
gi|296502310|ref|YP_003664010.1| flagellar motor protein MotS [Bacillus thuringiensis BMB171]
gi|206734379|gb|EDZ51549.1| putative chemotaxis protein MotB [Bacillus cereus AH1134]
gi|218161402|gb|ACK61394.1| putative chemotaxis protein MotB [Bacillus cereus B4264]
gi|218544664|gb|ACK97058.1| putative chemotaxis protein MotB [Bacillus cereus G9842]
gi|296323362|gb|ADH06290.1| flagellar motor protein MotS [Bacillus thuringiensis BMB171]
Length = 225
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D+ + + + + GI V R + + + + ++ + ++ +
Sbjct: 81 MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKGIISQLVGF 140
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS N +S RA + +LI+ ++ ++ G+A
Sbjct: 141 FQSVPN-PIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 199
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
PI ND+ + N+R+ I I
Sbjct: 200 DTKPIVPNDSPQNWEKNRRVVIYI 223
>gi|15596238|ref|NP_249732.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1]
gi|116048969|ref|YP_792229.1| hypothetical protein PA14_50880 [Pseudomonas aeruginosa UCBPP-PA14]
gi|152988234|ref|YP_001349691.1| hypothetical protein PSPA7_4338 [Pseudomonas aeruginosa PA7]
gi|218892997|ref|YP_002441866.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|254234177|ref|ZP_04927500.1| hypothetical protein PACG_00011 [Pseudomonas aeruginosa C3719]
gi|254239398|ref|ZP_04932720.1| hypothetical protein PA2G_00011 [Pseudomonas aeruginosa 2192]
gi|296390597|ref|ZP_06880072.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
PAb1]
gi|313105992|ref|ZP_07792253.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
gi|9946954|gb|AAG04430.1|AE004536_9 probable outer membrane protein precursor [Pseudomonas aeruginosa
PAO1]
gi|115584190|gb|ABJ10205.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126166108|gb|EAZ51619.1| hypothetical protein PACG_00011 [Pseudomonas aeruginosa C3719]
gi|126192776|gb|EAZ56839.1| hypothetical protein PA2G_00011 [Pseudomonas aeruginosa 2192]
gi|150963392|gb|ABR85417.1| probable outer membrane protein [Pseudomonas aeruginosa PA7]
gi|218773225|emb|CAW29037.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|310878755|gb|EFQ37349.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
Length = 210
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 68/198 (34%), Gaps = 23/198 (11%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF------------- 54
+ + ++GC + T SS
Sbjct: 10 LILVSGLLTGCAGLQKSDWPTCAAVGGVTGAGLGAIESSSWAGWGALIGGGVGAAYCWVH 69
Query: 55 ---------QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN- 104
Q + + T + ++ L IA L
Sbjct: 70 GAGEQVAPPPPQPVEEVAPPPPVVKEETIVVRDLHFAFDSSKVDAADSEKLNGIAERLKG 129
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ ST ++I HTDS+G+ N +S+ RA+ + +YLI GV S+ + V+G P+
Sbjct: 130 EAASTRLSITGHTDSVGSDAYNQKLSERRANAVANYLIDAGVPSSIIVGVQGLGESQPVA 189
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T+ GR N+R+EI I
Sbjct: 190 DNKTREGRAENRRVEILI 207
>gi|152984991|ref|YP_001349219.1| flagellar motor protein MotD [Pseudomonas aeruginosa PA7]
gi|150960149|gb|ABR82174.1| probable chemotaxis protein [Pseudomonas aeruginosa PA7]
Length = 296
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 59/175 (33%), Gaps = 7/175 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ ++ + +D D F + + V I + +
Sbjct: 76 TTEPERTSVEEQPSDNAASADSLQQIADSVRGAFGDLIASDQLSVRGNELWIEITLNSSL 135
Query: 81 SFVSEVFLEKKFL-PMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERAD 135
F S L +++ +A IL + + I ++ TD + N +S RA
Sbjct: 136 LFPSGDALPNDAAFGIVEKVAKILAPYKN-PIHVEGFTDDVPIHSQRYPTNWELSAARAA 194
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
I L+ ++ G+ P+ N + GR N+R+ + I +++
Sbjct: 195 SIVR-LLGNDGVEPSRMAAVGYGEFQPVADNASAAGRAKNRRVVLVISRNLEVRR 248
>gi|91781922|ref|YP_557128.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
LB400]
gi|296162179|ref|ZP_06844975.1| peptidoglycan-associated lipoprotein [Burkholderia sp. Ch1-1]
gi|91685876|gb|ABE29076.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
gi|295887565|gb|EFG67387.1| peptidoglycan-associated lipoprotein [Burkholderia sp. Ch1-1]
Length = 169
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 60/184 (32%), Gaps = 21/184 (11%)
Query: 1 MIKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M+ +L ++ ++ ++ C + + S +
Sbjct: 1 MMSKLRFAFAVLMVGALAACHSGVKLDENANKGGSVSAQPNPNDVAT------------- 47
Query: 59 QDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + D ++ + +LQ A L P + IQ +T
Sbjct: 48 ----VNVDPLNDPNSPLAKRSIYFDFDSYSVKDDYQSLLQQHAQYLKSHPQRHVLIQGNT 103
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ + ++ + + P T + N+R
Sbjct: 104 DERGTSEYNLALGQKRAEAVRR-SLSLMGVTDSQMEAVSLGKEKPQATGHDESSWAQNRR 162
Query: 178 IEIQ 181
++
Sbjct: 163 ADLV 166
>gi|54294667|ref|YP_127082.1| flagellar motor protein MotD [Legionella pneumophila str. Lens]
gi|53754499|emb|CAH15983.1| hypothetical protein lpl1744 [Legionella pneumophila str. Lens]
Length = 273
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 66/174 (37%), Gaps = 8/174 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHV 80
+ L + + F LD+ +L+D ++R + I +
Sbjct: 70 KATQSTDNLKDGPEEKKIKGTFKDGLDELNKSLS-ELEDGDFKLNRQEGWVEIDIKAGSL 128
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQERADV 136
++ + L L +A + P + ++ +TD+ +N +S RA
Sbjct: 129 FDSGSADIKPEALIKLMKLAEKIKNLP-FTVVVEGYTDNVPIETPQYPSNWELSAARAAT 187
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ ++ +N I V G+ +YPI N T+ GR N+R+ I I + +
Sbjct: 188 VGR-ILNGFGIANHRILVTGYGDQYPITDNYTEAGRSQNRRVNILITKNRKVDR 240
>gi|261343491|ref|ZP_05971136.1| peptidoglycan-associated lipoprotein [Providencia rustigianii DSM
4541]
gi|282568637|gb|EFB74172.1| peptidoglycan-associated lipoprotein [Providencia rustigianii DSM
4541]
Length = 165
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 65/180 (36%), Gaps = 22/180 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ IM ++ C + D+ + G S ++ + QLQ
Sbjct: 6 VLKGLMIALPIM-AVAACSSNKNNDQNGA-----DSAVDQTNTGLSAEELARQQMEQLQQ 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + ++ ML A L PS + ++ H D
Sbjct: 60 N---------------NTVYFGFDKYNVSPEYAEMLDAHAAFLRSNPSVRVVVEGHADER 104
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S +S+ + + P T+ N+R I
Sbjct: 105 GTPEYNIALGERRANAV-KMYLQSKGVSGDQVSLVSYGKEKPAVLGHTEADYAKNRRAVI 163
>gi|330998481|ref|ZP_08322305.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
gi|329568587|gb|EGG50392.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
Length = 292
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 5/130 (3%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD- 118
+ V + ++ + ++ + + ++ L IA I+ + + I+ +TD
Sbjct: 143 KDVDVQVLKGVVYISLADNMLYKSGSYEISERAGETLSKIAKIIMDYKEYEVLIEGNTDT 202
Query: 119 ---SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
S ++NN +S RA + L + ++ G P+ +NDT G+ N
Sbjct: 203 DPISRPNIRNNWDLSTLRASSVVQALQNTYGVDPKRLTAAGRGEYNPVASNDTPEGKMRN 262
Query: 176 QRIEIQIFPR 185
+R +I I P+
Sbjct: 263 RRTQIIITPK 272
>gi|206563399|ref|YP_002234162.1| putative peptidoglycan-associated lipoprotein [Burkholderia
cenocepacia J2315]
gi|198039439|emb|CAR55406.1| putative peptidoglycan-associated lipoprotein [Burkholderia
cenocepacia J2315]
Length = 163
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 22/182 (12%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K +++ ++GC A++ + ++ V L+
Sbjct: 1 MSKMNRIAVLATFVLLAGCHNAAKTPENAGAAPEPSSETVATVTADDLNNPNSPLAK--- 57
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ ++ +F +LQ A L P+ + IQ +TD
Sbjct: 58 -----------------RSIYFDFDQYSVKPEFQSLLQAHADYLRSHPARHVLIQGNTDE 100
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + Q R+ + S L + + P+ + N+R +
Sbjct: 101 RGTSEYNLALGQRRSQAVASALQTL-GVPATQLEAVSLGKEKPVALGHDEEAWAQNRRAD 159
Query: 180 IQ 181
+
Sbjct: 160 LV 161
>gi|171321509|ref|ZP_02910450.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5]
gi|171093217|gb|EDT38424.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5]
Length = 169
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 66/184 (35%), Gaps = 21/184 (11%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+ L L++ +++ ++ C + K + + ++D
Sbjct: 1 MMSNKARLALAVLMISALAACKSGVKLDDKANAGAVSTQPSADNVAQVNVDPL------- 53
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
++ ++ P++Q A L P + IQ +T
Sbjct: 54 ----------NDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNT 103
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ + GV+ ++ +V + P + + N+R
Sbjct: 104 DERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVS-LGKEKPQASGHDEASWAQNRR 162
Query: 178 IEIQ 181
++
Sbjct: 163 ADLV 166
>gi|163802040|ref|ZP_02195936.1| quinolinate synthetase [Vibrio sp. AND4]
gi|159174181|gb|EDP58989.1| quinolinate synthetase [Vibrio sp. AND4]
Length = 175
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 71/181 (39%), Gaps = 12/181 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M ++ C + + +T + + +D+ + +L++
Sbjct: 6 VLKGLLIAIPVM-AMTACSSSDDAASNAGAETNMNTGVSETTVVTPIDQNSQLAEQELKE 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A+ L+K P + I+ H D
Sbjct: 65 QALRETQT----------IYFAFDNSTIAGDYEEMLAAHASYLSKNPGLNVTIEGHADER 114
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +YL +S+ + + P+ ++ N+R +
Sbjct: 115 GTPEYNIALGERRAEAVSNYLQAL-GVQADQVSIVSYGEEKPLLLGQSEDVYAKNRRAVL 173
Query: 181 Q 181
Sbjct: 174 V 174
>gi|238785870|ref|ZP_04629838.1| Peptidoglycan-associated lipoprotein [Yersinia bercovieri ATCC
43970]
gi|238713240|gb|EEQ05284.1| Peptidoglycan-associated lipoprotein [Yersinia bercovieri ATCC
43970]
Length = 168
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 19/181 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + ++ C + S ++ +LQ
Sbjct: 6 VLKGLMLALPV-LAVAACSSNKSANNDQSGMGAGTGTENGSNLSS--EEQARLQMQELQK 62
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + F ML A L PS + ++ H D
Sbjct: 63 NNI---------------VYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER 107
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 108 GTPEYNIALGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVL 166
Query: 181 Q 181
Sbjct: 167 V 167
>gi|254714557|ref|ZP_05176368.1| peptidoglycan-associated lipoprotein [Brucella ceti M644/93/1]
gi|254717454|ref|ZP_05179265.1| peptidoglycan-associated lipoprotein [Brucella ceti M13/05/1]
gi|261219284|ref|ZP_05933565.1| peptidoglycan-associated lipoprotein [Brucella ceti M13/05/1]
gi|261322345|ref|ZP_05961542.1| peptidoglycan-associated lipoprotein [Brucella ceti M644/93/1]
gi|260924373|gb|EEX90941.1| peptidoglycan-associated lipoprotein [Brucella ceti M13/05/1]
gi|261295035|gb|EEX98531.1| peptidoglycan-associated lipoprotein [Brucella ceti M644/93/1]
Length = 168
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 57/173 (32%), Gaps = 26/173 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++F+ ++GC G
Sbjct: 12 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGFSQ-----------------GFT 54
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V +GD I + + L A L ++P I I+ H D GT +
Sbjct: 55 V-NVGDRI-------FFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADERGTRE 106
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + Q RA + +L RGV +NR ++ + + P+ D N+R
Sbjct: 107 YNLALGQRRAAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADTCWSQNRR 158
>gi|148380179|ref|YP_001254720.1| chemotaxis MotB protein [Clostridium botulinum A str. ATCC 3502]
gi|153932823|ref|YP_001384478.1| chemotaxis MotB protein [Clostridium botulinum A str. ATCC 19397]
gi|153937092|ref|YP_001387994.1| chemotaxis MotB protein [Clostridium botulinum A str. Hall]
gi|148289663|emb|CAL83767.1| putative chemotaxis MotB protein [Clostridium botulinum A str. ATCC
3502]
gi|152928867|gb|ABS34367.1| putative chemotaxis MotB protein [Clostridium botulinum A str. ATCC
19397]
gi|152933006|gb|ABS38505.1| putative chemotaxis MotB protein [Clostridium botulinum A str.
Hall]
Length = 254
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 74/216 (34%), Gaps = 36/216 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHK-----------SNDTDIVNKRFGSS------- 46
L L + + + K + + + G +
Sbjct: 23 LTLLLALFIVMFAMSKVDTAKLQKASQEFNVIFKAGSNVLQEGGSGGASVGKAGVSIVPS 82
Query: 47 --------LDKAEDEFQMQLQDTG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ + + + + +++ G + V D + I V F + + K+
Sbjct: 83 DSVTEDIKMKEIKSKLEKEIKKNGYSDKVKVGVDADGLEIDIQDVVLFNSGDAEVLKQSS 142
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSN 149
+L I+ +L I + HTD+ ++N +S RA + ++L G
Sbjct: 143 ALLTQISKMLKGL-DNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPA 201
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S++ + P N T+ GR N+R+EI I +
Sbjct: 202 NKLSIQAYGEYMPKFDNVTEAGRAKNRRVEISIVRK 237
>gi|332528553|ref|ZP_08404541.1| peptidoglycaN-associated lipoprotein [Hylemonella gracilis ATCC
19624]
gi|332042064|gb|EGI78402.1| peptidoglycaN-associated lipoprotein [Hylemonella gracilis ATCC
19624]
Length = 189
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 62/186 (33%), Gaps = 6/186 (3%)
Query: 1 MIKELGLSMF--IMTTISGCGL---ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+ K + L + + GC + + + ++ + +
Sbjct: 3 LKKWIVLGAAPILCVFMVGCSSVATTAPDTPSSTAAAAAPATPAPSVTTAAPEAKPAQAS 62
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ V++ D I + ++ +F +++ A + P+ + I
Sbjct: 63 APTPAAAVPVAKPADSIADVAKLVYFDYDSSAIKPEFRAVIEAHARFMQSNPARSVTIAG 122
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
H D G + NL + Q RAD ++ L+ ++ I F + P + N
Sbjct: 123 HADERGGTEYNLALGQRRADAVRQMLVLL-GVNSSQIETISFGKEKPAVRGSNEAAWAKN 181
Query: 176 QRIEIQ 181
+R EI
Sbjct: 182 RRAEIT 187
>gi|149921395|ref|ZP_01909848.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149817715|gb|EDM77180.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 224
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 47/216 (21%), Positives = 77/216 (35%), Gaps = 36/216 (16%)
Query: 1 MI----KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG------------ 44
M+ + L L C AS + L ++ + +
Sbjct: 1 MMARQARTLALVALSCALGFACTHASDTEPTQSLAEAPGSTALATSEQPTDAPVLAQASP 60
Query: 45 -----SSLDKAE-DEFQMQLQDTGIVVSRIGDM-------------ITCYIPVHVSFVSE 85
S LD+ + Q + V D E
Sbjct: 61 EAAPPSDLDQDGIPDTLDQCPEDPEDVDGDADEDGCPDLLCRLDPCEIAIFEKVYFAYDE 120
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
+E + P+L+ IA +L P I I HTDS G + N +SQ R D ++ +L+
Sbjct: 121 STIEPRSFPLLKDIAFVLGYSPQVTIQIAGHTDSKGRSEYNEGLSQRRVDSVREHLLSL- 179
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+++ +S G+ PIDTN T+ GR +N+R+E
Sbjct: 180 GVNDQQLSSVGYGEMTPIDTNRTEAGRAHNRRVEFL 215
>gi|86135195|ref|ZP_01053777.1| OmpA family protein [Polaribacter sp. MED152]
gi|85822058|gb|EAQ43205.1| OmpA family protein [Polaribacter sp. MED152]
Length = 452
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 62/167 (37%), Gaps = 4/167 (2%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT---GIVVSRIGDMITCYIPV 78
D DK +E + ++ ++I
Sbjct: 287 PTVAGPAANAGCPWPDTDGDGVLDKDDKCINEVGPASNNGCPEEVITKEATEVINFTAKS 346
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L I ++ K+P +I HTDS G+ NL +S++RA ++
Sbjct: 347 ILFNSGRATFKAGVTKQLDAIVDVMAKYPKATFSIGGHTDSSGSSSLNLRLSEKRAIAVR 406
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + + G+ +PIDTN T+ GR NN+R+EI++
Sbjct: 407 D-YLVKNGVETTRLEAIGYGEGFPIDTNKTRAGRANNRRVEIKVTNE 452
>gi|51595504|ref|YP_069695.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pseudotuberculosis IP 32953]
gi|153948068|ref|YP_001401830.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pseudotuberculosis IP 31758]
gi|170025177|ref|YP_001721682.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pseudotuberculosis YPIII]
gi|186894557|ref|YP_001871669.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pseudotuberculosis PB1/+]
gi|51588786|emb|CAH20400.1| peptidoglycan-associated lipoprotein Pal, OmpA family of porins
[Yersinia pseudotuberculosis IP 32953]
gi|152959563|gb|ABS47024.1| peptidoglycan-associated lipoprotein [Yersinia pseudotuberculosis
IP 31758]
gi|169751711|gb|ACA69229.1| peptidoglycan-associated lipoprotein [Yersinia pseudotuberculosis
YPIII]
gi|186697583|gb|ACC88212.1| peptidoglycan-associated lipoprotein [Yersinia pseudotuberculosis
PB1/+]
Length = 168
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 57/181 (31%), Gaps = 19/181 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + ++ C + S ++ +LQ
Sbjct: 6 VLKGLMLALPV-LAVAACSSNKSANNDQSGMGAGTGTENGSNLSS--EEQARLQMQELQK 62
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + F ML A L PS + ++ H D
Sbjct: 63 NNI---------------VYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER 107
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + +Q S IS+ + + P + N+R +
Sbjct: 108 GTPEYNIALGERRASAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVL 166
Query: 181 Q 181
Sbjct: 167 V 167
>gi|325286110|ref|YP_004261900.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324321564|gb|ADY29029.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 372
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 4/149 (2%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D+ + L E Q D + R + ++ L +
Sbjct: 228 DVSVEAKDRELPPLYAETVPQKADATPKIERNK---VYTFKNVLFEFNKADLLTASEEEI 284
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
++ TIL I I HTD++G+ + NL +S +RA + SYLI + G
Sbjct: 285 NVLTTILRNNNKLSIEIYGHTDAVGSKERNLELSNQRAKAVASYLID-SGIDENRVKWIG 343
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ P+ N T+ GR N+R+E ++
Sbjct: 344 YGSSKPVADNTTEEGRTQNRRVEFKMLEN 372
>gi|187778759|ref|ZP_02995232.1| hypothetical protein CLOSPO_02354 [Clostridium sporogenes ATCC
15579]
gi|187772384|gb|EDU36186.1| hypothetical protein CLOSPO_02354 [Clostridium sporogenes ATCC
15579]
Length = 251
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 58/167 (34%), Gaps = 6/167 (3%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-S 84
+ ++ + + V G + + +V F
Sbjct: 81 GETTKLGRETGSDAKSDSKEVYNEVNKFVDKNNLKSSVEVKEDGRGVIIQLRDNVLFEIG 140
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSY 140
++ + ++ I ++ P+ + ++ HTD++ +N +S RA + Y
Sbjct: 141 RADIKPQSKQIMDKINGLIATLPN-EVIVEGHTDNVPIKNEVYGSNWELSTARAVNVLRY 199
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ + + G+ PI N++ V + N+R+ I I +
Sbjct: 200 FVETKKQNPVRFTAAGYGEYRPIAQNNSDVNKAKNRRVNIVIVSKEK 246
>gi|307294752|ref|ZP_07574594.1| peptidoglycan-associated lipoprotein [Sphingobium chlorophenolicum
L-1]
gi|306879226|gb|EFN10444.1| peptidoglycan-associated lipoprotein [Sphingobium chlorophenolicum
L-1]
Length = 169
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 64/184 (34%), Gaps = 20/184 (10%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K L + ++ C + ++ D +
Sbjct: 1 MKISRTLLVATAIVALAACSKKAPKELPPP----------------PADTSTQTTGPATP 44
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ S+ + + + + ++ + +LQ A L + P+ + I+ H D
Sbjct: 45 SGPVKGSQEDFVASVSSDRILFDTDQYDVDAQDQQILQSQAAWLQQNPNVRVTIEGHADE 104
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-I 178
GT N+ + + RA+ K+YL G+ + R I+ + + P + N+R +
Sbjct: 105 RGTRDYNIALGERRANAAKNYLASLGIDAGR-ITTVSYGKERPAALGSDEAAWAQNRRAV 163
Query: 179 EIQI 182
+ +
Sbjct: 164 TVTV 167
>gi|146298593|ref|YP_001193184.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146153011|gb|ABQ03865.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 314
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 61/154 (39%), Gaps = 9/154 (5%)
Query: 41 KRFGSSLDKAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPML 96
++ K ++ L + G+ V + + + F S + + +
Sbjct: 149 AAKEEAMRKLKETLSKALTGFEGKGLTVEHKNGKVYVSMENKLLFNSGSWAVGTEGRRAV 208
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRF 151
+ +L P + I+ HTD NN +S +RA I + L + + +
Sbjct: 209 VELGKVLGDNPDLSVLIEGHTDDDPYAGSGPIANNWDLSTKRATAIVAILSENPKINKQK 268
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ G + P+ +N T G+ N+RIEI + PR
Sbjct: 269 LTAAGRSEFSPLASNATPEGKAKNRRIEIILTPR 302
>gi|7532784|gb|AAF63228.1| outer membrane protein [Acinetobacter sp.]
Length = 368
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 52/100 (52%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++ ++ ++ P + +A L ++P+ I+ HTD+ G N +S RA+ +K
Sbjct: 251 VFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIEGHTDNTGPRALNERLSLARANSVK 310
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S L+ +S +GFA+ PI N+TK GR N+R+
Sbjct: 311 SSLVNEYNVDASRLSTQGFAWDQPIADNNTKEGRAMNRRV 350
>gi|83590576|ref|YP_430585.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
gi|83573490|gb|ABC20042.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
Length = 244
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 68/206 (33%), Gaps = 26/206 (12%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL------------------ 47
+++ + I ++ + + + I GS +
Sbjct: 33 LITLLMAFFIVMYAVSKVDMARYQQLAQALSQIFTSSAGSMVLPELGNGNQVTPPDELAG 92
Query: 48 --DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILN 104
+ Q + V+ + V F + L +P+LQ IA L
Sbjct: 93 FSQDLQSYLAEQGLKDQVFVTATDQGLIISFTGSVLFDRGQATLRPASVPILQKIAGYLG 152
Query: 105 KFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ P+ I + TD + N +S RA + Y + S G+
Sbjct: 153 QVPNY-IGVAGSTDDLPINTSQFPTNWELSVIRATTVIRYFTETAGLSPSRFVALGYGQY 211
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRG 186
+P+ N+++ R+ N+R++I I+
Sbjct: 212 HPLFPNNSEEDRRKNRRVDIIIYKEN 237
>gi|108761291|ref|YP_633197.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108465171|gb|ABF90356.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 640
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 70/184 (38%), Gaps = 18/184 (9%)
Query: 17 GCGLASREKKKVFLHKS--------------NDTDIVNKRFGSSLDKAEDEFQMQLQDT- 61
GC + V D D LD E
Sbjct: 440 GCPDPDNDNDGVLDTADRCPNEAGPKENRGCPDKDTDGDGIVDRLDNCPTEPGPAKNHGC 499
Query: 62 -GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDS 119
+++IG+ + ++ + + +L +A IL P + ++ HTD+
Sbjct: 500 KEKQLAQIGENRIQLLEAVYFENNKDIIIARSNKLLDTVANILIAHPEVEKVRVEGHTDN 559
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G NL +SQ RAD + YL+ +GV+ R + +GF PI N+T GR N+R+E
Sbjct: 560 RGNPDYNLDLSQRRADAVVRYLVSKGVARER-LDAKGFGPTQPIADNNTTQGRAKNRRVE 618
Query: 180 IQIF 183
+I
Sbjct: 619 FKIV 622
>gi|114563951|ref|YP_751465.1| flagellar motor protein MotB [Shewanella frigidimarina NCIMB 400]
gi|114335244|gb|ABI72626.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 308
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 7/162 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKF 92
D + + K ++ ++ D I + +G I I SF S FL+ KF
Sbjct: 141 KDAASSQENINDQVKKMAEKLNEEIVDGAIEIESLGQQIIIRIREKGSFASGSGFLQPKF 200
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSS 148
P+++ I +L P I + HTD + +N +S +RA + L +
Sbjct: 201 KPIVRSIGELLKDVPGI-ITVSGHTDGADINNELYSSNWELSSQRAVAVAHELRRVSGFD 259
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ V G A P+ ND+ + N+R+EI I +G K+
Sbjct: 260 ESRMKVVGEASNRPLVANDSNENQARNRRVEISI-EQGKAKE 300
>gi|163866832|gb|ABY47586.1| outer membrane protein A [Acinetobacter baumannii]
Length = 334
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 208 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 267
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 268 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 327
Query: 175 NQRI 178
N+R+
Sbjct: 328 NRRV 331
>gi|163866824|gb|ABY47582.1| outer membrane protein A [Acinetobacter baumannii]
Length = 337
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 208 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 267
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 268 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 327
Query: 175 NQRI 178
N+R+
Sbjct: 328 NRRV 331
>gi|37525408|ref|NP_928752.1| peptidoglycan-associated outer membrane lipoprotein [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36784836|emb|CAE13749.1| peptidoglycan-associated lipoprotein precursor [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 166
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 56/177 (31%), Gaps = 21/177 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ +M ++ C + + + E Q
Sbjct: 6 VLKGLMLALPVM-AVAACSSNKNADNDQTGVGTVNETNAGLSAEELARQQMQELQNN--- 61
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + F +L A L PS + ++ H D
Sbjct: 62 ----------------NIVYFGFDKYDINSDFTQLLDAHAAFLRSNPSYKVVVEGHADER 105
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + + RA+ + +Q S IS+ + + P + N+R
Sbjct: 106 GTPEYNIALGERRANAV-KMYLQGKGVSGEQISIVSYGKEKPAVLGHDEAAYAKNRR 161
>gi|258621416|ref|ZP_05716450.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM573]
gi|258586804|gb|EEW11519.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM573]
Length = 173
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 67/181 (37%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ + ++ C + + + V+ + L+ + +L++
Sbjct: 6 VLKGLLIALPV-LAVTACSSS--DDAANASGSQTNQSAVSTVDSNGLNAQGQLTEQELKE 62
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A L K PS + I+ H D
Sbjct: 63 QALRENQT----------IYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTIEGHADER 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + ++ + +S+ + + P+ ++ N+R +
Sbjct: 113 GTPEYNIALGERRAQAVAK-YLEALGVQSGQVSIVSYGEEKPLVLGQSEDAYAKNRRAVL 171
Query: 181 Q 181
Sbjct: 172 V 172
>gi|284040562|ref|YP_003390492.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283819855|gb|ADB41693.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 294
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 5/135 (3%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ D + V ++ I + F + K +L +A ++N I ++
Sbjct: 143 DDINDQDVQVEVKKGVVYVSISDKLLFKSGSYDITPKAETVLGKVAKVVNDHKDLDILVE 202
Query: 115 SHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
HTD S +K+N +S RA + L + + ++ G + P D N T V
Sbjct: 203 GHTDAVPISTPAIKDNWDLSALRATSVVRTLQAKFGVAPERLTAGGRSEFAPKDDNTTAV 262
Query: 171 GRQNNQRIEIQIFPR 185
GRQ N+R EI I P+
Sbjct: 263 GRQQNRRTEIIITPK 277
>gi|290559940|pdb|2KGW|A Chain A, Solution Structure Of The Carboxy-Terminal Domain Of
Ompatb, A Pore Forming Protein From Mycobacterium
Tuberculosis
Length = 129
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L +L +A L P + I +TD+ G+ N+ +S +RA ++ Y
Sbjct: 28 FGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADY 87
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ R + I+ G PI +N T GR N+R+EI +
Sbjct: 88 LVAR-GVAGDHIATVGLGSVNPIASNATPEGRAKNRRVEIVV 128
>gi|161525757|ref|YP_001580769.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
gi|160343186|gb|ABX16272.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
Length = 176
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 66/183 (36%), Gaps = 20/183 (10%)
Query: 1 MIKELGLSMFIMT--TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K++ L++ +M ++ C + K + + ++D
Sbjct: 9 MSKKVRLALAVMMIGALAACKSGVKLDDKANAGAMSTQPSADNVAQVNVDPL-------- 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
++ ++ P+LQ A L P + IQ +TD
Sbjct: 61 ---------NDPNSPLAKRSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTD 111
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + NL + Q+RA+ ++ L GV+ ++ +V + P T + N+R
Sbjct: 112 ERGTSEYNLALGQKRAEAVRRALALLGVADSQMEAVS-LGKEKPQATGHDEASWAQNRRA 170
Query: 179 EIQ 181
++
Sbjct: 171 DLV 173
>gi|75760652|ref|ZP_00740680.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|228900309|ref|ZP_04064539.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222]
gi|228907361|ref|ZP_04071219.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200]
gi|228920439|ref|ZP_04083784.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228938842|ref|ZP_04101442.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228952108|ref|ZP_04114203.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228958007|ref|ZP_04119744.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228971723|ref|ZP_04132344.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978332|ref|ZP_04138709.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407]
gi|229043482|ref|ZP_04191192.1| OmpA/MotB domain protein [Bacillus cereus AH676]
gi|229069280|ref|ZP_04202570.1| OmpA/MotB domain protein [Bacillus cereus F65185]
gi|229078910|ref|ZP_04211462.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2]
gi|229109185|ref|ZP_04238784.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15]
gi|229144340|ref|ZP_04272746.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24]
gi|229149929|ref|ZP_04278157.1| OmpA/MotB domain protein [Bacillus cereus m1550]
gi|229178137|ref|ZP_04305508.1| OmpA/MotB domain protein [Bacillus cereus 172560W]
gi|229189825|ref|ZP_04316836.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876]
gi|74491866|gb|EAO55054.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|228593633|gb|EEK51441.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876]
gi|228605267|gb|EEK62717.1| OmpA/MotB domain protein [Bacillus cereus 172560W]
gi|228633610|gb|EEK90211.1| OmpA/MotB domain protein [Bacillus cereus m1550]
gi|228639127|gb|EEK95551.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24]
gi|228674195|gb|EEL29440.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15]
gi|228704324|gb|EEL56758.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2]
gi|228713767|gb|EEL65652.1| OmpA/MotB domain protein [Bacillus cereus F65185]
gi|228725860|gb|EEL77107.1| OmpA/MotB domain protein [Bacillus cereus AH676]
gi|228781349|gb|EEM29550.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407]
gi|228787813|gb|EEM35771.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228801714|gb|EEM48594.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228807640|gb|EEM54164.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228820691|gb|EEM66716.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228839069|gb|EEM84365.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228852222|gb|EEM97018.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200]
gi|228859344|gb|EEN03774.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222]
Length = 226
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D+ + + + + GI V R + + + + ++ + ++ +
Sbjct: 82 MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKGIISQLVGF 141
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS N +S RA + +LI+ ++ ++ G+A
Sbjct: 142 FQSVPN-PIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 200
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
PI ND+ + N+R+ I I
Sbjct: 201 DTKPIVPNDSPQNWEKNRRVVIYI 224
>gi|291326447|ref|ZP_06124556.2| peptidoglycan-associated lipoprotein [Providencia rettgeri DSM
1131]
gi|291314244|gb|EFE54697.1| peptidoglycan-associated lipoprotein [Providencia rettgeri DSM
1131]
Length = 180
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 65/180 (36%), Gaps = 22/180 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ IM ++ C + +N T G S ++ + QLQ
Sbjct: 21 VLKGLMIALPIM-AVAACSSNKNNDQDGVDTSTNQT-----NTGLSAEELARQQMEQLQQ 74
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + ++ ML A L PS + ++ H D
Sbjct: 75 N---------------NTVYFGFDKYNVSPEYAEMLDAHAAFLRSNPSVRVVVEGHADER 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S +S+ + + P T+ N+R I
Sbjct: 120 GTPEYNIALGERRANAV-KMYLQSKGVSGDQVSLVSYGKEKPAVLGHTEADYAKNRRAVI 178
>gi|188534419|ref|YP_001908216.1| peptidoglycan-associated outer membrane lipoprotein [Erwinia
tasmaniensis Et1/99]
gi|188029461|emb|CAO97338.1| Peptidoglycan-associated lipoprotein Pal, OmpA family of porins
[Erwinia tasmaniensis Et1/99]
Length = 172
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 61/183 (33%), Gaps = 19/183 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL--DKAEDEFQMQL 58
++K L L++ + ++ C D ++ D+ +L
Sbjct: 6 VLKGLMLALPV-IAVAACSSHKNNNNDQTNGMGLDGSANGGMNSGNMSSDEQARLQMQEL 64
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q I + + ++ F ML AT L PS + ++ H D
Sbjct: 65 QKNNI---------------VYFGLDKYDIQSDFAQMLDAHATFLRSNPSYKVTVEGHAD 109
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N+ + + R+ + +Q + IS+ + + P + N+R
Sbjct: 110 ERGTPEYNIALGERRSSAV-KMYLQGKGVAEDQISIVSYGKEKPAVLGHDESAYAKNRRA 168
Query: 179 EIQ 181
+
Sbjct: 169 VLV 171
>gi|330810957|ref|YP_004355419.1| lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327379065|gb|AEA70415.1| putative lipoprotein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 269
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
S+ + + Q+ + ++ + + + E L+ ++ I L
Sbjct: 125 SVQQQGKWLEEQI--MAMATTQTDRGLVMTLGDVLFDTGEAELKNSANRVVLKIVQFLQL 182
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P V+ I+ +TDS G + NL +S++RA + L+ GV R I V G+ +YP+D
Sbjct: 183 NPKRVVRIEGYTDSTGGKQENLKLSRDRAQAVADVLVDLGVDEKR-IQVEGYGDQYPVDV 241
Query: 166 NDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 242 NASERGRAQNRRVEIV 257
>gi|330807884|ref|YP_004352346.1| OmpA/MotB, OmpA family protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375992|gb|AEA67342.1| Conserved hypothetical protein; putative OmpA/MotB, putative OmpA
family protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 241
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L + L + L+ I + HTDS+G+ N +S+ RA +
Sbjct: 137 VLFDFDKSDLTAEARSQLDGLMGKLSHANVASIRVVGHTDSVGSDAYNQGLSERRASSVV 196
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YL+ + + ++ G P+ N+T GR N+R+E+ I
Sbjct: 197 EYLLTQ-GLAPDKLTSEGKGESEPVADNETDEGRAQNRRVELHI 239
>gi|303248654|ref|ZP_07334908.1| peptidoglycan-associated lipoprotein [Desulfovibrio fructosovorans
JJ]
gi|302489910|gb|EFL49836.1| peptidoglycan-associated lipoprotein [Desulfovibrio fructosovorans
JJ]
Length = 171
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 65/182 (35%), Gaps = 21/182 (11%)
Query: 3 KELGLSMF-IMTTISG--CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+ L L++ +M +++G C KK + + L + E + ++
Sbjct: 5 RILTLAVLVLMLSLTGFGCA------KKAGGPGDGSGTSWEDQEKARL-EQERALREKMG 57
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
++++ L + +L A I+ ++P + ++ + D
Sbjct: 58 QAANELAQM----------IHFAFDSSNLTAESRQILTRKAEIMRQYPQIKVIVEGNCDQ 107
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + + RA + +S + + P+D ++ N+R E
Sbjct: 108 RGTAEYNLALGERRAQAAAQ-YLSNLGIPADRLSTVSYGKERPLDPGHSEAAYAKNRRDE 166
Query: 180 IQ 181
+
Sbjct: 167 FR 168
>gi|260548855|ref|ZP_05823077.1| outer membrane protein omp38 [Acinetobacter sp. RUH2624]
gi|260408023|gb|EEX01494.1| outer membrane protein omp38 [Acinetobacter sp. RUH2624]
Length = 350
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 208 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 267
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 268 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 327
Query: 175 NQRI 178
N+R+
Sbjct: 328 NRRV 331
>gi|226942084|ref|YP_002797158.1| Pal [Laribacter hongkongensis HLHK9]
gi|226717011|gb|ACO76149.1| Pal [Laribacter hongkongensis HLHK9]
Length = 169
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 62/181 (34%), Gaps = 16/181 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ ++ ++T ++ C + + Q+
Sbjct: 1 MLKQSLSALAVVTLLAACASTKPADPNANANAAGANQGATAG--------------QMTS 46
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + I ++ ++ P+++ A L + + IQ +TD+
Sbjct: 47 GNVDPLKDPNNI-LSKRSVYFDFDSSAVKGEYRPVVEAHAQYLKQNTARKAQIQGNTDAR 105
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ + NL + Q R++ +K + + F + P T T N+R ++
Sbjct: 106 GSREYNLALGQRRSESVKQAMRVL-GVPEAQLEAVSFGKEKPRATGTTAADYAENRRADV 164
Query: 181 Q 181
Sbjct: 165 V 165
>gi|194337429|ref|YP_002019223.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
gi|194309906|gb|ACF44606.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 337
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 59/108 (54%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++ ++ + P L+ IA +LNK P+ + + HTD++G + N ++S+ R
Sbjct: 228 VALYGIYFDPNKWDIKPESRPALKEIAILLNKQPTLRLHVVGHTDNVGGYEANTVLSKRR 287
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
A+ + + L++ S ++ G AY P+ +N T+ GR N+R+E+
Sbjct: 288 AEAVAASLVKDFGISALRLTANGAAYLAPVASNSTEAGRAKNRRVELV 335
>gi|301309047|ref|ZP_07214992.1| outer membrane protein, OmpA family [Bacteroides sp. 20_3]
gi|300833073|gb|EFK63698.1| outer membrane protein, OmpA family [Bacteroides sp. 20_3]
Length = 277
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 6/153 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
N + + L +D + V+ + + + F ++K+ L
Sbjct: 117 AQNAKVQNLLSSVKDALLG-FNSDELTVTEKNGKVYVAMSDKLLFQSGSAKVDKRGKEAL 175
Query: 97 QLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+A +LNK + I+ HTDS K+N +S RA + L + + I
Sbjct: 176 AKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQI 235
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+ N+T GR N+R EI + P+
Sbjct: 236 QPCGRGEFMPVADNETADGRSKNRRTEIIMAPK 268
>gi|300772773|ref|ZP_07082643.1| OmpA family outer membrane protein [Sphingobacterium spiritivorum
ATCC 33861]
gi|300761076|gb|EFK57902.1| OmpA family outer membrane protein [Sphingobacterium spiritivorum
ATCC 33861]
Length = 628
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+EF+ ++ I V + + +++ L L + L + P
Sbjct: 501 NEEFEARILLKPIEVDKN-----VVLNNIFFALNKYDLLPSSTSDLNTLVLFLQENPLIR 555
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I I HTD+ G + N +S RA + SYLI RG+S+NR + +G+ P+ TN+T+
Sbjct: 556 IEIGGHTDNTGNDQLNKTLSDNRAKAVVSYLIARGISANRLL-AKGYGSNQPLATNETET 614
Query: 171 GRQNNQRIEIQIF 183
G+ N+R E +I
Sbjct: 615 GKALNRRTEFKII 627
>gi|84502861|ref|ZP_01000974.1| OmpA family protein [Oceanicola batsensis HTCC2597]
gi|84388844|gb|EAQ01714.1| OmpA family protein [Oceanicola batsensis HTCC2597]
Length = 191
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 67/183 (36%), Gaps = 10/183 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREK---KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
IK L + ++SG A + + ++ + + D E +
Sbjct: 13 IKGLAAAALCAVSVSGPATAQDSRLGYNERYVPTIWVDPDGCEHWVMD-DGLEGYMSPHV 71
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
GI V G++ + ++ Q +A +T I HTD
Sbjct: 72 NRQGIPVCNRGNVCGVMETDQFFATDKYYISPANR---QRLAEFFKSSTATAFIIAGHTD 128
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S + + N+ +S RA+ + G R VRG+ + P TN+T+ G N+R+
Sbjct: 129 SRASDEYNMRLSYNRANAVARVAAATG---ARIADVRGYGERMPAATNNTRAGMAKNRRV 185
Query: 179 EIQ 181
EI
Sbjct: 186 EII 188
>gi|162456876|ref|YP_001619243.1| hypothetical protein sce8593 [Sorangium cellulosum 'So ce 56']
gi|161167458|emb|CAN98763.1| probable outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 210
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 67/189 (35%), Gaps = 18/189 (9%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+F++ + + + ++ + L+ E L + I +
Sbjct: 27 LFGLFVLFFVWAISFQVDLARDLAAERATR-----ATERARLEALESALAGPLAEGRITL 81
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN---KFPSTVIAIQSHTDSIG- 121
+ I + ++ L+ + +L+ +A L + +I + TD
Sbjct: 82 TEGRIGIR---GSILFELNSAELQPAGIALLRALADPLKAYLEHHDELIMVSGFTDDRPL 138
Query: 122 -----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+N +S +RA + L GV + GF ++P+ NDT R N+
Sbjct: 139 TSSSRGYADNWELSAQRALTVTRALAAAGVPDTSLFAA-GFGERHPVAPNDTSENRAKNR 197
Query: 177 RIEIQIFPR 185
R+EI PR
Sbjct: 198 RVEISPIPR 206
>gi|146306455|ref|YP_001186920.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145574656|gb|ABP84188.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 244
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ V++ ++ + + L + +L ++ L + +
Sbjct: 116 SAPVAPAMEPVAQDEVIVLSDLGNVLFAFDSAELTAEARRLLTDVSARLTGASLVSVKVV 175
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTDS+G+ N +S+ RA + +L+ + +S G P+ N + GR
Sbjct: 176 GHTDSVGSDAYNQGLSERRARSVADFLVAQ-GVPAGKLSTEGRGESQPVADNGSDAGRAQ 234
Query: 175 NQRIEIQI 182
N+R+E+ +
Sbjct: 235 NRRVELYV 242
>gi|119776394|ref|YP_929134.1| OmpA/MotB [Shewanella amazonensis SB2B]
gi|119768894|gb|ABM01465.1| OmpA/MotB [Shewanella amazonensis SB2B]
Length = 201
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 66/170 (38%), Gaps = 8/170 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
C + + +N + +A + ++ I GD+ T
Sbjct: 15 ACSMRDTVSMDQP---TTQVFDLNDPDRDGVIEARERCAGTVKGAAIDNYGCGDIKTINE 71
Query: 77 PV---HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ +L ++ ++ +A+ + +FP+T + I+ H G N+ +SQ R
Sbjct: 72 RRELKVLFPNDSSYLAPQYFGQIEELASFMRQFPNTKVTIEGHCSRTGGYDYNMELSQRR 131
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI--EIQ 181
A+ + L Q+ + + GF Y P+D +DT N+R+ EI
Sbjct: 132 ANAVTEVLTQQYGIESSRLKAVGFGYNSPVDPSDTPEAHDKNRRVIAEIV 181
>gi|119357024|ref|YP_911668.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
DSM 266]
gi|119354373|gb|ABL65244.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 369
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
L+ + ++ I ++N +P + I+ HTDS G N ++S++
Sbjct: 260 RIATTGIKFDTGNATLKPESNGVINEIVKMMNTYPVIRLRIEGHTDSDGDTSANQILSEK 319
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
R+ + + + + +S+ F P+ N T G+ NN+R+E
Sbjct: 320 RSAAV-KAALIKRGIAAVRLSISSFGETKPVADNTTSEGKANNRRVEFV 367
>gi|107021874|ref|YP_620201.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116688822|ref|YP_834445.1| OmpA-like protein [Burkholderia cenocepacia HI2424]
gi|170732121|ref|YP_001764068.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia
MC0-3]
gi|206561548|ref|YP_002232313.1| putative OmpA family lipoprotein [Burkholderia cenocepacia J2315]
gi|105892063|gb|ABF75228.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116646911|gb|ABK07552.1| OmpA-like protein [Burkholderia cenocepacia HI2424]
gi|169815363|gb|ACA89946.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia
MC0-3]
gi|198037590|emb|CAR53528.1| putative OmpA family lipoprotein [Burkholderia cenocepacia J2315]
Length = 170
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 67/185 (36%), Gaps = 22/185 (11%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+ L L++ +++ ++ C + K + T
Sbjct: 1 MMSNKARLALAVMMISALAACKSGVKLDDKANNAGAVSTQPSADNVAQ------------ 48
Query: 58 LQDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V + D ++ ++ P++Q A L P + IQ +
Sbjct: 49 -----VNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGN 103
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD GT + NL + Q+RA+ ++ + GV+ ++ +V + P T + N+
Sbjct: 104 TDERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNR 162
Query: 177 RIEIQ 181
R ++
Sbjct: 163 RADLV 167
>gi|300715890|ref|YP_003740693.1| peptidoglycan-associated lipoprotein Pal, OmpA family of porins
[Erwinia billingiae Eb661]
gi|299061726|emb|CAX58842.1| Peptidoglycan-associated lipoprotein Pal, OmpA family of porins
[Erwinia billingiae Eb661]
Length = 172
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 63/183 (34%), Gaps = 19/183 (10%)
Query: 1 MIKELGLSMFIMTTISGCGL-ASREKKKVFLHKSNDTDIVNKRFGS-SLDKAEDEFQMQL 58
++K L L++ + ++ C + + G+ S D+ +L
Sbjct: 6 VLKGLMLALPV-IAVAACSSHKNNNNDQTNGMGDGANANSGMNSGNMSSDEQARLQMQEL 64
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q I + + ++ +F ML A L PS + ++ H D
Sbjct: 65 QKNNI---------------VYFGLDKYDIQSEFAQMLDAHANFLRSNPSYKVTVEGHAD 109
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N+ + + RA + +Q S IS+ + + P + N+R
Sbjct: 110 ERGTPEYNIALGERRATAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDESAYAKNRRA 168
Query: 179 EIQ 181
+
Sbjct: 169 VLV 171
>gi|313895933|ref|ZP_07829487.1| chemotaxis protein MotB [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975358|gb|EFR40819.1| chemotaxis protein MotB [Selenomonas sp. oral taxon 137 str. F0430]
Length = 310
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 65/178 (36%), Gaps = 10/178 (5%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDI---VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
SG G ++ + N N+ + +K E + + D
Sbjct: 65 FFSGMGPSTSQTAPSISGNDNGNGAYMKENENLSEAQEKLEQYIKEHDLQDQVSTELSED 124
Query: 71 MITCYIPVH-VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + L+ + ++ +IA +L P + I HTD++ +
Sbjct: 125 GLMIRLKEKALFDSGSAALQGQAEQIVPVIAALLTSLPE-RVTISGHTDNVPIATSQFPS 183
Query: 130 -----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S +++ + + + S G++ PI +NDT+ GR N+R+E+ I
Sbjct: 184 NWELSSARAVSLMRGLMGAQPSLNPARFSALGYSEYRPIASNDTEEGRAQNRRVEVFI 241
>gi|221210024|ref|ZP_03583005.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
CGD1]
gi|221170712|gb|EEE03178.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
CGD1]
Length = 163
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 56/176 (31%), Gaps = 21/176 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ + + GC A++ + + + ++ V LD
Sbjct: 7 FAVIAALALLGGCHQAAKTPENTGMAPTPSSEAVTTVTADDLDNPNSPLAK--------- 57
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
++ + +LQ A L PS + IQ +TD GT +
Sbjct: 58 -----------RSVYFDFDSYTVKPEDQSLLQAHANYLRSHPSRHVLIQGNTDERGTSEY 106
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL + Q R+ + S ++ S + + P+ + N+R ++
Sbjct: 107 NLALGQRRSQAVMS-ALETLGVSASQLEAVSLGKEKPVALGHDEAAWAQNRRADLV 161
>gi|78189221|ref|YP_379559.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like [Chlorobium chlorochromatii CaD3]
gi|78171420|gb|ABB28516.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like protein [Chlorobium chlorochromatii
CaD3]
Length = 422
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+++ ++ + + + + ++ + P +++ HTDS G NN +S+ RA I +
Sbjct: 321 FDINKATIKPESMGTINYVVKMMQEHPELKFSVEGHTDSDGADANNQTLSEARAQAIVNK 380
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
LI+ + ++ +G+ PI N+T G+ N+R+E
Sbjct: 381 LIE-SGIAKERLTSKGWGESKPITNNETAEGKAQNRRVEFI 420
>gi|293611044|ref|ZP_06693343.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826696|gb|EFF85062.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 357
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L ++P+ I+
Sbjct: 215 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLTEYPNATARIE 274
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 275 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 334
Query: 175 NQRI 178
N+R+
Sbjct: 335 NRRV 338
>gi|113867012|ref|YP_725501.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Ralstonia eutropha H16]
gi|113525788|emb|CAJ92133.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Ralstonia eutropha H16]
Length = 308
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
DKA F + + + L P+L A + P
Sbjct: 174 DKAPPCFPKAEAAPDPIGQALEGAGRVQLYGVNFETDSDVLSAAARPLLDRAAKAVLAHP 233
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ ++ HTDS G N +S+ RA ++ YL GV ++R + +G+ +P+ +ND
Sbjct: 234 DWRLRVEGHTDSTGGDARNQPLSERRAAAVRRYLESAGVPADR-LDAKGYGATHPLMSND 292
Query: 168 TKVGRQNNQRIEI 180
T GR N+R+E+
Sbjct: 293 TPFGRAQNRRVEL 305
>gi|325123365|gb|ADY82888.1| putative outer membrane protein precursor (OmpA-like)
[Acinetobacter calcoaceticus PHEA-2]
Length = 347
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L ++P+ I+
Sbjct: 199 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLTEYPNATARIE 258
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 259 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 318
Query: 175 NQRI 178
N+R+
Sbjct: 319 NRRV 322
>gi|300112859|ref|YP_003759434.1| peptidoglycan-associated lipoprotein [Nitrosococcus watsonii C-113]
gi|299538796|gb|ADJ27113.1| peptidoglycan-associated lipoprotein [Nitrosococcus watsonii C-113]
Length = 187
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 15/184 (8%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ---DTG 62
+ + + GC + +V + G S + + + G
Sbjct: 7 FFLLAGIYGLVGCA------GGTAATQGGSPGVVVEERGESPYPEGEALEEESATTWGIG 60
Query: 63 IVVSRIGDMIT-----CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ GD + V +++ P+++ L K P I ++ HT
Sbjct: 61 EGAAYEGDPLADPASPLASRVVYFEFDSSEIQQDDRPIVEAHGGYLAKHPDIKIILEGHT 120
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ + NL + + RA+ + LI +S + V + + P + Q N+R
Sbjct: 121 DERGSREYNLALGERRANAV-RSLILLMGASEEQVEVVSYGEERPAVDGQDEGAWQLNRR 179
Query: 178 IEIQ 181
+EI
Sbjct: 180 VEIL 183
>gi|297380304|gb|ADI35191.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
v225d]
Length = 183
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 64/184 (34%), Gaps = 3/184 (1%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + I+GC ++ + + +K E + + + +
Sbjct: 1 MKRSSVFSFLVAFLFIAGCKHNMDKETVAGDVSAKTVQSAPVSTETVQEKQEPKEEPKQE 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 61 PAPVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 119
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ LI + I F P T T+ + N+R++
Sbjct: 120 FGSSEYNQALGVKRTLSVKNALIIK-GVEKDMIKTISFGETKPKCTQKTRECYRENRRVD 178
Query: 180 IQIF 183
+++
Sbjct: 179 VKLV 182
>gi|71733989|ref|YP_273664.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71554542|gb|AAZ33753.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 418
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 178 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 237
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 238 TRLAKVVEGDQKTAVLILGHADTSGPTEANQKISQERAQSVAAIFRL-SGLERNRLSQRG 296
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 297 MGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 329
>gi|30019773|ref|NP_831404.1| flagellar motor protein MotS [Bacillus cereus ATCC 14579]
gi|229127054|ref|ZP_04256053.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4]
gi|29895318|gb|AAP08605.1| Chemotaxis motB protein [Bacillus cereus ATCC 14579]
gi|228656407|gb|EEL12246.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4]
Length = 226
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D+ + + + + GI V R + + + + ++ + ++ +
Sbjct: 82 MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKGIISQLVGF 141
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS N +S RA + +LI+ ++ ++ G+A
Sbjct: 142 FQSVPN-PIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 200
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
PI ND+ + N+R+ I I
Sbjct: 201 DTKPIVPNDSPQNWEKNRRVVIYI 224
>gi|299768851|ref|YP_003730877.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter sp.
DR1]
gi|298698939|gb|ADI89504.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter sp.
DR1]
Length = 347
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L ++P+ I+
Sbjct: 199 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLTEYPNATARIE 258
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 259 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 318
Query: 175 NQRI 178
N+R+
Sbjct: 319 NRRV 322
>gi|257457608|ref|ZP_05622775.1| chemotaxis protein MotB [Treponema vincentii ATCC 35580]
gi|257444994|gb|EEV20070.1| chemotaxis protein MotB [Treponema vincentii ATCC 35580]
Length = 238
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 66/172 (38%), Gaps = 9/172 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A + S K G++L KA F +++ I V+ I +
Sbjct: 63 SAGKLADLGNTISSMPAMEKGKMLGTALKKAVSIFAPEIKTNKIAVTSDERGIVISLAAD 122
Query: 80 VSF-VSEVFLE-KKFLPMLQLIATIL--NKFPSTVIAIQSHTDSI----GTLKNNLLISQ 131
F + L ++ L IA L + + I+ HTDS G +N +S
Sbjct: 123 SFFARNSAELNIEESRETLLRIAQFLSDKELAARRFRIEGHTDSSDALSGKWTSNWELSA 182
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + + + S+ G+A P+ +N+T GR N+R++I I
Sbjct: 183 ARAINVLHN-LTDFGAQEDKFSIAGYADTRPVYSNETAEGRAYNRRVDIIIL 233
>gi|256425882|ref|YP_003126535.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256040790|gb|ACU64334.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 630
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
I + + + + L+ L + +L + P+ I I HTD+IG
Sbjct: 509 IALQPLDTSAVLVLHNIFFDTRQFALKTGSELELNRLVALLRENPTVTIEISGHTDNIGN 568
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K+N+L+S+ RA + YL+ + + + +G+ P+ N T GR N+R E++I
Sbjct: 569 TKDNVLLSERRAQAVVKYLVDK-GIAAERLQAKGYGETKPVADNMTAAGRAENRRTELKI 627
Query: 183 F 183
Sbjct: 628 L 628
>gi|292669789|ref|ZP_06603215.1| chemotaxis protein MotB [Selenomonas noxia ATCC 43541]
gi|292648586|gb|EFF66558.1| chemotaxis protein MotB [Selenomonas noxia ATCC 43541]
Length = 304
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 69/196 (35%), Gaps = 16/196 (8%)
Query: 2 IKELGLSMFIMT------TISGCGLASREKKKVFLHKSNDTDI---VNKRFGSSLDKAED 52
+++L + SG G ++ + N T N + +K E
Sbjct: 47 MQQLAEAFTAAFNMGGPSFFSGMGPSNSQSDASISGVDNGTGAYLKENADLSEAKEKLEQ 106
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ + + + + F L+ + ++ +IA +L+ P +
Sbjct: 107 YIKEHDLQDQVSTELSEEGLMIRLKERALFASGSAQLQGQAEQIVPVIAALLSSLPE-RV 165
Query: 112 AIQSHTDSIGTLKNNLLI-----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
I HTD++ S +++ + + + S G++ PI +N
Sbjct: 166 TISGHTDNVPISTAQFPSNWELSSARAVSLMRGLMTAQPTLNPARFSALGYSEYRPIASN 225
Query: 167 DTKVGRQNNQRIEIQI 182
DT GR N+R+E+ I
Sbjct: 226 DTDEGRAQNRRVEVFI 241
>gi|320529440|ref|ZP_08030528.1| putative flagellar motor protein MotB [Selenomonas artemidis F0399]
gi|320138406|gb|EFW30300.1| putative flagellar motor protein MotB [Selenomonas artemidis F0399]
Length = 310
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 65/178 (36%), Gaps = 10/178 (5%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDI---VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
SG G ++ + N N+ + +K E + + D
Sbjct: 65 FFSGMGPSTSQTAPSISGNDNGNGAYMKENENLSEAQEKLEQYIKEHDLQDQVSTELSED 124
Query: 71 MITCYIPVH-VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + L+ + ++ +IA +L P + I HTD++ +
Sbjct: 125 GLMIRLKEKALFDSGSAALQGQAEQIVPVIAALLTSLPE-RVTISGHTDNVPIATSQFPS 183
Query: 130 -----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S +++ + + + S G++ PI +NDT+ GR N+R+E+ I
Sbjct: 184 NWELSSARAVSLMRGLMGAQPSLNPARFSALGYSEYRPIASNDTEEGRAQNRRVEVFI 241
>gi|83592431|ref|YP_426183.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
gi|83575345|gb|ABC21896.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
Length = 161
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 24/178 (13%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K L ++ ++ C + GS +
Sbjct: 1 MMKFGFLGAVAATMLLAACSSTPDTGAGGAGAGGASSSTSGPTAGSVAEFQ--------- 51
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+GD + + L LQ A LN++ + + ++ H D
Sbjct: 52 ------QVVGDRV-------FFGYDQYNLAPDARATLQRQAQWLNQYGNFSLTVEGHADE 98
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + NL + + RA+ ++ +LI + S + V + + P+ T + N+R
Sbjct: 99 RGTREYNLALGERRANSVREFLISQ-GVSANRLRVVSYGKERPVCTETAESCYARNRR 155
>gi|262360905|gb|ACY57626.1| hypothetical protein YPD4_0717 [Yersinia pestis D106004]
Length = 208
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L ML + P +I + HTD G + N ++S +RA+ ++
Sbjct: 76 SLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALR 135
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ S +V+G+ PI NDT GR N+R+EI + P+ +
Sbjct: 136 DWMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISLVPQAD 184
>gi|241764618|ref|ZP_04762633.1| peptidoglycan-associated lipoprotein [Acidovorax delafieldii 2AN]
gi|241365939|gb|EER60569.1| peptidoglycan-associated lipoprotein [Acidovorax delafieldii 2AN]
Length = 178
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 61/180 (33%), Gaps = 5/180 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L++ + ++GC + KS S + + L
Sbjct: 1 MFKRVSLAITVAALMAGCSSGVKLDDVPVEDKSAIPTAGANGANSGNAGSNGVAGVNLGQ 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ R G + ++ +F +++ A + + + ++ HTD
Sbjct: 61 SA----RDGAGPVGVSRLVYFDYDSYVIKPEFQSLIEAHARFIKSSSNRKVVVEGHTDER 116
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + NL + Q+RA+ ++ + + + F + + N+R E+
Sbjct: 117 GGREYNLALGQKRAEAVRR-SLGLLGVPDSQVEAVSFGKEKLAVQGTGEDVHAQNRRAEL 175
>gi|298372894|ref|ZP_06982884.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298275798|gb|EFI17349.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 587
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ I + R+ + +++ + P L + L P + + SHTDS
Sbjct: 459 ENNIYLKRVKKNEAIRLDNVHYDLNKATIRPDARPELDRLVKYLKDNPKIRVEMSSHTDS 518
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-----TNDTKVGRQN 174
G+ N +SQ+RAD +K YL+++G++ +R SV G+ ++ +N T+ Q
Sbjct: 519 RGSDAYNQRLSQQRADAVKLYLVEKGIAPSRIKSV-GYGETKLLNNCGNGSNCTEEQHQL 577
Query: 175 NQRIEIQIF 183
N+R E+++
Sbjct: 578 NRRTEMKVI 586
>gi|256842297|ref|ZP_05547801.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256736181|gb|EEU49511.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 295
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 6/153 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
N + + L +D + V+ + + + F ++K+ L
Sbjct: 135 AQNAKVQNLLSSVKDALLG-FNSDELTVTEKNGKVYVAMSDKLLFQSGSAKVDKRGKEAL 193
Query: 97 QLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+A +LNK + I+ HTDS K+N +S RA + L + + I
Sbjct: 194 AKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQI 253
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+ N+T GR N+R EI + P+
Sbjct: 254 QPCGRGEFMPVADNETADGRSKNRRTEIIMAPK 286
>gi|229591493|ref|YP_002873612.1| hypothetical protein PFLU4061 [Pseudomonas fluorescens SBW25]
gi|229363359|emb|CAY50495.1| putative outer membrane protein [Pseudomonas fluorescens SBW25]
Length = 257
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 59/157 (37%), Gaps = 4/157 (2%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ +I R LD + + + + L+
Sbjct: 99 TDAQLDNIAVDRTQVQLDVRTAQLKAL---QAMKARPTERGQVVTFGDVLFDTGRAELKP 155
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
Q +AT L + P + ++ TDS G N +S+ RA + +Q+ +
Sbjct: 156 GSQRDFQGLATFLLQNPERQVRVEGFTDSTGGDAFNQSLSERRAQAVAR-GLQQLGVGPQ 214
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++V G+ ++P+ N + RQ N+R+E+ + G+
Sbjct: 215 RMAVMGYGKQFPVADNVSAQSRQLNRRVEVIVSNDGS 251
>gi|170769100|ref|ZP_02903553.1| peptidoglycan-associated lipoprotein [Escherichia albertii TW07627]
gi|170122172|gb|EDS91103.1| peptidoglycan-associated lipoprotein [Escherichia albertii TW07627]
Length = 175
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 12/181 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C SND G+ +D +
Sbjct: 6 VLKGLMIALPVM-AIAACSSNKN--------ASNDGSEGMLGAGTGMDANGGNGNGNMSS 56
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
++ + I + + + F ML A L PS + ++ H D
Sbjct: 57 EEQARLQMQQLQQNNI--VYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER 114
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 115 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 173
Query: 181 Q 181
Sbjct: 174 V 174
>gi|129307154|gb|ABO30515.1| outer membrane protein A [Acinetobacter baumannii]
Length = 340
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 208 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 267
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 268 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 327
Query: 175 NQRI 178
N+R+
Sbjct: 328 NRRV 331
>gi|300727657|ref|ZP_07061045.1| OmpA family protein [Prevotella bryantii B14]
gi|299775083|gb|EFI71687.1| OmpA family protein [Prevotella bryantii B14]
Length = 286
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + ++ + ++ + + + L IA I+ + + I+ +TD++
Sbjct: 137 VDVQVLKGVVYISLADNMLYKSGSYEVNDRAEQTLSKIAKIIKDYKDYDVLIEGNTDNVP 196
Query: 122 TL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+NN +S RA + YL + + ++ G PI TNDT++G+
Sbjct: 197 VNTKAVSMKNIRNNWDLSALRASSVVQYLQDHYGINPKRLTAGGRGEYNPIATNDTELGK 256
Query: 173 QNNQRIEIQIFPR 185
Q N+R +I I P+
Sbjct: 257 QRNRRTQIIITPK 269
>gi|288573018|ref|ZP_06391375.1| OmpA/MotB domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288568759|gb|EFC90316.1| OmpA/MotB domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 240
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 68/192 (35%), Gaps = 8/192 (4%)
Query: 2 IKELGLSM-FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD---KAEDEFQMQ 57
K++ +S + + G + D ++ S+ + + Q
Sbjct: 45 FKKMMVSFQGALGVLDGGKSLQEDPLPYGGSSGYDAGEERRQTQSTFQVDRELRSFLKDQ 104
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILN-KFPSTVIA--I 113
+ + V +T + + F V + + +L + L + P+ +
Sbjct: 105 EMEQDVSVIVDQRGVTVSLSDQLLFPLGGVDIRPEGKRLLAKLGEFLKGRIPALAVEGHT 164
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
G ++N +S RA ++ SYL+ S + G+ P+ ND+ R
Sbjct: 165 DDRPLRGGPYRDNWGLSAIRAAIVASYLVDAAGISPSIVQAVGYGPFRPVVPNDSDENRS 224
Query: 174 NNQRIEIQIFPR 185
N+R+++ I +
Sbjct: 225 RNRRVDLVILSK 236
>gi|261856894|ref|YP_003264177.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261837363|gb|ACX97130.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 331
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 59/151 (39%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
S + ++ + + + + + LE
Sbjct: 180 DSAQGLQAPAVYLKLIEGQPMKTGEVTVTAKAISNGLAQNGHIALYGIHFATDSAALEAS 239
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L +A +L + PS + I HTD G L +NL +S++RAD + LI R S+
Sbjct: 240 SDKELGEMAKMLKQEPSAHVYIVGHTDDTGALPHNLKLSRDRADAVVKALITRYGISSNR 299
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G A P+ +N + GR N+R+EI +
Sbjct: 300 LVAEGVASFAPVASNASDQGRALNRRVEIVL 330
>gi|188527909|ref|YP_001910596.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
Shi470]
gi|188144149|gb|ACD48566.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
Shi470]
Length = 183
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 64/184 (34%), Gaps = 3/184 (1%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + I+GC ++ + + +K E + + + +
Sbjct: 1 MKRSSVFSFLVAFLFIAGCKHNMDKEAVAGDVSAKAVQSAPVSTETVQEKQEPKEEPKQE 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 61 PAPVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 119
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ LI + I F P T TK + N+R++
Sbjct: 120 FGSSEYNQALGVKRTLSVKNALIIK-GVEKDMIKTISFGETKPKCTQKTKECYKENRRVD 178
Query: 180 IQIF 183
+++
Sbjct: 179 VKLV 182
>gi|126733987|ref|ZP_01749734.1| OmpA family domain protein [Roseobacter sp. CCS2]
gi|126716853|gb|EBA13717.1| OmpA family domain protein [Roseobacter sp. CCS2]
Length = 312
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 6/174 (3%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
+ IS A + + D + + + + L L + VV R
Sbjct: 142 LSLFISRTTEAGFVQITHVGPMAVDPEPIAEAEAAPLRAFGATPDAALAEQLEVVGRS-- 199
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ L LQ +A L P +A+ HTDS G+L+ N+ +S
Sbjct: 200 ----VLSDLSFETGSAQLAAGNYASLQALADYLAGAPQLRVALVGHTDSSGSLEANIALS 255
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ RA + L+ +S I G Y PI N T+ GR+ N+R+E+ +
Sbjct: 256 KRRAASVLERLVSAYGTSRGQIEAEGMGYLAPIAPNLTEEGREANRRVEVIVTS 309
>gi|121605683|ref|YP_983012.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans
CJ2]
gi|120594652|gb|ABM38091.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2]
Length = 210
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 61/205 (29%), Gaps = 23/205 (11%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVF--------------------LHKSNDTDI 38
M K ++ + ++ G + + K +
Sbjct: 1 MNKLNKVAMLFASAALVTAAGAQTIDNWKNGNGDLVWKNGTNELCWRDNFWTPATAAPGC 60
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
+ V+ Y + ++ L
Sbjct: 61 DGAIVPVVAPVVVASAPPVAAPVVVPVAPPAATKVTYAADAFFDFDKSVIKPAGKEKLDD 120
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ + VI HTDS+G+ N +S R++ +K+YL+ + + G
Sbjct: 121 LIGKIKDINLEVIIAVGHTDSVGSDSYNQKLSVRRSEAVKAYLVSK-GIEKNRVYTEGKG 179
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIF 183
K P+ N T GR N+R+EI++
Sbjct: 180 EKQPVADNKTAEGRAKNRRVEIEVV 204
>gi|160876689|ref|YP_001556005.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|160862211|gb|ABX50745.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|315268889|gb|ADT95742.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 485
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 46/108 (42%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + + + P+L ++A+ L + P+ + HTD G N +S+ RA
Sbjct: 373 TLEGLLFDYDSERMLPESKPVLDVLASYLKQHPALSFYVVGHTDDKGERSYNQSLSERRA 432
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L + ++ G P+ +N G++ N+R+E+ +
Sbjct: 433 AAVIKQLSDGFQIPSAQLTAHGNGEYSPVASNTNDAGQKLNRRVELVL 480
>gi|260557183|ref|ZP_05829399.1| outer membrane protein omp38 [Acinetobacter baumannii ATCC 19606]
gi|75438841|sp|Q6RYW5|OMP38_ACIBA RecName: Full=Outer membrane protein omp38; AltName: Full=Outer
membrane protein ompA; AltName: Full=Outer membrane
protein ompAb; Flags: Precursor
gi|40287452|gb|AAR83911.1| outer membrane protein A [Acinetobacter baumannii]
gi|260409289|gb|EEX02591.1| outer membrane protein omp38 [Acinetobacter baumannii ATCC 19606]
Length = 356
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 208 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 267
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 268 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 327
Query: 175 NQRI 178
N+R+
Sbjct: 328 NRRV 331
>gi|332286730|ref|YP_004418641.1| OmpA/MotB [Pusillimonas sp. T7-7]
gi|330430683|gb|AEC22017.1| OmpA/MotB [Pusillimonas sp. T7-7]
Length = 220
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 79/208 (37%), Gaps = 30/208 (14%)
Query: 4 ELGLSMFIMTTISGCGLAS--------------------------REKKKVFLHKSNDTD 37
+ + ++ ++GC + + K L +
Sbjct: 9 RVTTLVAVVALMAGCANMNEMGTGGKTAVGAGAGAAVGAGLGALIGDSSKAALIGAGIGA 68
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDT-GIVVSRIGDM-ITCYIPVHV-SFVSEVFLEKKFLP 94
+ G + +++ + + G+ V+ + D + IP +V + L+ LP
Sbjct: 69 VAGGIAGYNWKTVKNDVEKSGASSLGVDVTEMPDGTLRVNIPSNVSFDTGKYALKPALLP 128
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+L +A L + P +TDS G+ + N +S RA + +YL +GV ++
Sbjct: 129 VLDSVARALVQHPELRAKSIGYTDSTGSAQVNQTLSVNRARAVANYLSDKGVPVGN-LTA 187
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ N T GR N+R+E+ +
Sbjct: 188 EGRGPSNPVGDNATAEGRAMNRRVELYL 215
>gi|262281137|ref|ZP_06058919.1| outer membrane protein A [Acinetobacter calcoaceticus RUH2202]
gi|262257368|gb|EEY76104.1| outer membrane protein A [Acinetobacter calcoaceticus RUH2202]
Length = 352
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L ++P+ I+
Sbjct: 210 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLTEYPNATARIE 269
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 270 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 329
Query: 175 NQRI 178
N+R+
Sbjct: 330 NRRV 333
>gi|261380420|ref|ZP_05984993.1| OmpA family protein [Neisseria subflava NJ9703]
gi|284796655|gb|EFC52002.1| OmpA family protein [Neisseria subflava NJ9703]
Length = 411
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 6/153 (3%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKFL 93
+ I ++ + + ++ + V D T I + ++ ++
Sbjct: 238 PSVITKQQDTQKTVRLRPLLENEIARKLVSVEDFQDRSTVTILGDGLFESGSAQIQDQYY 297
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSN 149
P+L ++ L+ I + +TD+ +N +SQ RAD +K L+ +
Sbjct: 298 PVLAAVSQALDSVEG-QIIVTGYTDNQPIQSLNFPSNWHLSQARADAVKEILLNYVKNGG 356
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I G P+ NDT R N+R+EI +
Sbjct: 357 TRIRSEGRGSTDPVAPNDTLENRAKNRRVEITL 389
>gi|206580983|ref|YP_002237058.1| OmpA family protein [Klebsiella pneumoniae 342]
gi|288934021|ref|YP_003438080.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
gi|290510919|ref|ZP_06550288.1| lipoprotein yfiB [Klebsiella sp. 1_1_55]
gi|206570041|gb|ACI11817.1| OmpA family protein [Klebsiella pneumoniae 342]
gi|288888750|gb|ADC57068.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
gi|289775912|gb|EFD83911.1| lipoprotein yfiB [Klebsiella sp. 1_1_55]
Length = 160
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 27/183 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+++ + ++ ++GC K E ++
Sbjct: 1 MLRKYFVPALMAAALLTGCQAPQG-------------------------KFTPEQVAAMK 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +A+ L T ++ HTD+
Sbjct: 36 SYGFT-ESNGDWSLGLSDSILFDKNDYRLRPDSRQQITTMASRLAATGITHSRLEGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+ + + + RG KYPI +NDT GR N+R+
Sbjct: 95 YGEDSYNEALSLKRANSVADAWAEGAHVPRSHLVTRGLGKKYPIASNDTAAGRAENRRVT 154
Query: 180 IQI 182
+ I
Sbjct: 155 VVI 157
>gi|150006781|ref|YP_001301524.1| putative flagellar motor protein MotB [Parabacteroides distasonis
ATCC 8503]
gi|149935205|gb|ABR41902.1| putative flagellar motor protein MotB [Parabacteroides distasonis
ATCC 8503]
Length = 277
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 6/153 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
N + + L +D + V+ + + + F ++K+ L
Sbjct: 117 AQNAKVQNLLSSVKDALLG-FNSDELTVTEKNGKVYVAMSDKLLFQSGSAKVDKRGKEAL 175
Query: 97 QLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+A +LNK + I+ HTDS K+N +S RA + L + + I
Sbjct: 176 AKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQI 235
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+ N+T GR N+R EI + P+
Sbjct: 236 QPCGRGEFMPVADNETADGRSKNRRTEIIMAPK 268
>gi|37523008|ref|NP_926385.1| photosystem I P700 chlorophyll a apoprotein A2 [Gloeobacter
violaceus PCC 7421]
gi|68052682|sp|Q7NFT5|PSAB_GLOVI RecName: Full=Photosystem I P700 chlorophyll a apoprotein A2;
AltName: Full=PsaB
gi|35214011|dbj|BAC91380.1| Photosystem I P700 chlorophyll A apoprotein A2 [Gloeobacter
violaceus PCC 7421]
Length = 872
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 7/120 (5%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
G ++ V + ++ P L + ++ + S + I HTDS+G N
Sbjct: 746 GGVMLLLPENIVFDFDKSSVKLDADPALNRVVGVIQFYGSEPVEILGHTDSLGEDAYNQK 805
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQI 182
+S+ERA +K++ ++ ++ +G+ P+ N D GRQ N+R+EI I
Sbjct: 806 LSEERASAVKAFF-EKKGIEAERLTAKGYGETKPVAPNAKPDGSDNPDGRQQNRRVEILI 864
>gi|92115867|ref|YP_575596.1| OmpA/MotB [Nitrobacter hamburgensis X14]
gi|91798761|gb|ABE61136.1| OmpA/MotB [Nitrobacter hamburgensis X14]
Length = 334
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 49/116 (42%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
IG + ++ L+ + P L IA +LN P + I HTD+ G
Sbjct: 216 RSIGATGRIALYGIFFDTAKADLKPESNPTLAEIAGLLNADPKLAVLIVGHTDNQGAFDY 275
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL +S+ RA+ + L R + G P +ND + GR N+R+E+
Sbjct: 276 NLDLSRRRAEAVVKTLAANFRVEPRRLRAAGVGMMAPAASNDAEDGRAKNRRVEVV 331
>gi|163866826|gb|ABY47583.1| outer membrane protein A [Acinetobacter baumannii]
Length = 343
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 208 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 267
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 268 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 327
Query: 175 NQRI 178
N+R+
Sbjct: 328 NRRV 331
>gi|152969309|ref|YP_001334418.1| peptidoglycan-associated outer membrane lipoprotein [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206576207|ref|YP_002239637.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae 342]
gi|288936478|ref|YP_003440537.1| peptidoglycan-associated lipoprotein [Klebsiella variicola At-22]
gi|290510465|ref|ZP_06549835.1| peptidoglycan-associated lipoprotein [Klebsiella sp. 1_1_55]
gi|329998743|ref|ZP_08303197.1| peptidoglycan-associated lipoprotein [Klebsiella sp. MS 92-3]
gi|150954158|gb|ABR76188.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|206565265|gb|ACI07041.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae 342]
gi|288891187|gb|ADC59505.1| peptidoglycan-associated lipoprotein [Klebsiella variicola At-22]
gi|289777181|gb|EFD85179.1| peptidoglycan-associated lipoprotein [Klebsiella sp. 1_1_55]
gi|328538570|gb|EGF64674.1| peptidoglycan-associated lipoprotein [Klebsiella sp. MS 92-3]
Length = 174
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 64/181 (35%), Gaps = 13/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C K + + ++ G + + Q
Sbjct: 6 VLKGLMIALPVM-AIAACSS-----NKNASNDQSGEGMLGAGTGMDANGNGGNMSSEEQA 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + I + + + F ML A L PS + ++ H D
Sbjct: 60 RLQMQQLQQNNIV------YFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 113
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 114 GTPEYNIALGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 172
Query: 181 Q 181
Sbjct: 173 V 173
>gi|110833620|ref|YP_692479.1| peptidogycan-associated lipoprotein [Alcanivorax borkumensis SK2]
gi|110646731|emb|CAL16207.1| Peptidogycan-associated lipoprotein [Alcanivorax borkumensis SK2]
Length = 189
Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 54/164 (32%), Gaps = 2/164 (1%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM-QLQDTGIVVSRIGDMITCYI 76
C E + TD + + + L T
Sbjct: 20 CSSTPTEDDTSATDSMSQTDTSPVTSVERSEPVKPDTSSIPLTADNFYNHPSNYDGTTDS 79
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + L+ AT L + I ++ H D GT + N+ +S+ R+
Sbjct: 80 RVIYFAFDSNTIPAAAFETLRAHATYLKNNANAKIRLEGHADERGTREYNVALSERRSKA 139
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
++ +L + ++ + + + + P +++ N+R+EI
Sbjct: 140 VEKFLRVQ-GVASSQLEIVSYGEEKPAAFGHSEMDWAKNRRVEI 182
>gi|259909069|ref|YP_002649425.1| peptidoglycan-associated outer membrane lipoprotein [Erwinia
pyrifoliae Ep1/96]
gi|292487662|ref|YP_003530535.1| peptidoglycan-associated lipoprotein [Erwinia amylovora CFBP1430]
gi|292898899|ref|YP_003538268.1| peptidoglycan-associated lipoprotein [Erwinia amylovora ATCC 49946]
gi|224964691|emb|CAX56208.1| Peptidoglycan-associated lipoprotein Pal, OmpA family of porins
[Erwinia pyrifoliae Ep1/96]
gi|283479095|emb|CAY75011.1| Peptidoglycan-associated lipoprotein precursor [Erwinia pyrifoliae
DSM 12163]
gi|291198747|emb|CBJ45856.1| peptidoglycan-associated lipoprotein precursor [Erwinia amylovora
ATCC 49946]
gi|291553082|emb|CBA20127.1| Peptidoglycan-associated lipoprotein precursor [Erwinia amylovora
CFBP1430]
gi|310767031|gb|ADP11981.1| peptidoglycan-associated outer membrane lipoprotein [Erwinia sp.
Ejp617]
gi|312171770|emb|CBX80028.1| Peptidoglycan-associated lipoprotein precursor [Erwinia amylovora
ATCC BAA-2158]
Length = 172
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 62/183 (33%), Gaps = 19/183 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL--DKAEDEFQMQL 58
++K L L++ + ++ C D + ++ D+ +L
Sbjct: 6 VLKGLMLALPV-IAVAACSSHKNNNNDQTNGMGLDGSANSGMNSGNMSSDEQARLQMQEL 64
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q I + + ++ F ML A L PS + ++ H D
Sbjct: 65 QKNNI---------------VYFGLDKYDIQSDFAQMLDAHANFLRSNPSYKVTVEGHAD 109
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N+ + + RA + +Q ++ IS+ + + P + N+R
Sbjct: 110 ERGTPEYNIALGERRASAV-KMYLQGKGVADDQISIVSYGKEKPAVLGHDESAYAKNRRA 168
Query: 179 EIQ 181
+
Sbjct: 169 VLV 171
>gi|332877182|ref|ZP_08444932.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684925|gb|EGJ57772.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 284
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 55/130 (42%), Gaps = 5/130 (3%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD- 118
+ + + ++ + ++ + + ++ L IA I+ + + I+ +TD
Sbjct: 135 KDVDIQVLKGVVYISLADNMLYKSGSYEISERAGETLSKIAKIIMDYKEYEVLIEGNTDT 194
Query: 119 ---SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
S ++NN +S RA + L + ++ G P+ +NDT G+ N
Sbjct: 195 DPISRPNIRNNWDLSTLRASSVVQALQNTYGVDPKRLTAAGRGEYNPVASNDTPEGKMRN 254
Query: 176 QRIEIQIFPR 185
+R +I I P+
Sbjct: 255 RRTQIIITPK 264
>gi|162454304|ref|YP_001616671.1| OmpA family outer membrane protein [Sorangium cellulosum 'So ce
56']
gi|161164886|emb|CAN96191.1| putative OmpA family outer membrane protein [Sorangium cellulosum
'So ce 56']
Length = 488
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 62/167 (37%), Gaps = 7/167 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC E + D +++ ED+ D G
Sbjct: 326 GC---PEEDADDDHDGVPNADDECPDEKETINGVEDD--DGCPDKGEPRVAYEQGEFVIR 380
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERAD 135
LE+ L +A ++ P + ++ HTD GT + N +S++RA+
Sbjct: 381 DTIRFRTGSAELEQDSYRTLDQVALVMKANPEIERLRVEGHTDETGTPELNQELSEQRAE 440
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ YLI++GVS R ++ GF P+ N+R+E I
Sbjct: 441 TVRKYLIRKGVSPGR-LTAEGFGSDRPVAEGTDPASLAKNRRVEFVI 486
>gi|150024175|ref|YP_001295001.1| flagellar motor/chemotaxis (MotB)-related protein [Flavobacterium
psychrophilum JIP02/86]
gi|149770716|emb|CAL42180.1| Flagellar motor/Chemotaxis (MotB)-related protein [Flavobacterium
psychrophilum JIP02/86]
Length = 320
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQ---DTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKF 92
+ + +S+ K ++ L+ G+ V + + + + F S + +
Sbjct: 151 EALIAAKEASMKKLKETLSKSLKAFEGKGLTVQQKDGKVYVSMENKLLFESGSWAVGTEG 210
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSI------GTLKNNLLISQERADVIKSYLIQRGV 146
+ +A +L P I I+ HTD+ G ++NN +S +RA I + L +
Sbjct: 211 KKAVVAVAKVLGDNPDISILIEGHTDNDKFAGAVGQIENNWDLSTKRATSIVNILGENPK 270
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + ++ G P+ +NDT G+ N+RIEI + P+
Sbjct: 271 VNKQNLTAAGRGEFSPLMSNDTPEGKAKNRRIEIILTPK 309
>gi|331015715|gb|EGH95771.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 320
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 80 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 139
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 140 TRLAKVVEGDQKTAVLILGHADTSGPTEGNQKISQERAQSVAAIFRL-SGLERNRLSQRG 198
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 199 MGAVMPRAANDSLEGRALNRRVEILMTPQDTMR 231
>gi|329890560|ref|ZP_08268903.1| ompA family protein [Brevundimonas diminuta ATCC 11568]
gi|328845861|gb|EGF95425.1| ompA family protein [Brevundimonas diminuta ATCC 11568]
Length = 191
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 3/180 (1%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+G + +SGC + V + D V+ A + +
Sbjct: 13 IGAVAVLGIAVSGCASHRFVRDNVQVVNERV-DGVDAHVTRVEGTAGEALARANAAHKLA 71
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTL 123
+ + V+ L + L + L + + + IQ HTDS G
Sbjct: 72 QGKFLYEVVLSDDSVKFPVNHTELSPEAEQRLAELVQRLRAENANVYLEIQGHTDSTGND 131
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N + QERA+ ++ +L +G++ NR ++ + P+ N+T+ GR N+R+ I +
Sbjct: 132 QINERLGQERAEAVRRFLSDQGIALNRMATIS-YGASKPVAPNNTREGRAQNRRVAIMVL 190
>gi|262173862|ref|ZP_06041539.1| protein F-related protein [Vibrio mimicus MB-451]
gi|261891220|gb|EEY37207.1| protein F-related protein [Vibrio mimicus MB-451]
Length = 207
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 71/203 (34%), Gaps = 24/203 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKK------KVFLHKS---------NDTDIVNKRFGSS 46
+K + + ++GCG + ++ V + +
Sbjct: 4 MK--FWVLCVAFLLTGCGSLATDRMFNDNLLDVAPKGDFDVRYPEWGMAPQLNSAGVQGP 61
Query: 47 LDKAE----DEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIA 100
L + + + L GI + GD + + + + L +A
Sbjct: 62 LRQVRTSSYEALRQFLLSNGIDHEIMPGDYPMIKLKNTIKFDTGSAKVSVQSKQWLDRMA 121
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L I ++ HTD+ G K N +S++RA + + + + I RG+
Sbjct: 122 QFLASESGIDIVLEGHTDNTGAQKFNDTLSEKRASSV-KTALVQRQVAQNAIYTRGYGEH 180
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P TN TK GR N+R+E++
Sbjct: 181 VPACTNKTKNGRACNRRVEVRFI 203
>gi|71066157|ref|YP_264884.1| outer membrane protein OprF [Psychrobacter arcticus 273-4]
gi|71039142|gb|AAZ19450.1| outer membrane protein OprF, OmpA/OmpF family [Psychrobacter
arcticus 273-4]
Length = 240
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIP--VHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ L I ++ +G + ++ K +L+ + + +P
Sbjct: 102 KSAPIPTLLQEPIAITTVGKPEIKNRAQFNVLFDFDNAGIKSKHSAVLRGMTNFIQAYPQ 161
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ ++ HTD+ G +L +S+ R +++K+ L+ + +S G+ P+D+N+T
Sbjct: 162 IAVTLEGHTDNKGPESYHLKLSESRVNMVKNILVDKYGVDAMRLSTVGYGETMPVDSNNT 221
Query: 169 KVGRQNNQRIEIQIFPRGN 187
+ GRQNN+R+ + R N
Sbjct: 222 EKGRQNNRRVVAIVSQRNN 240
>gi|15596245|ref|NP_249739.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1]
gi|218892990|ref|YP_002441859.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|254234184|ref|ZP_04927507.1| hypothetical protein PACG_00018 [Pseudomonas aeruginosa C3719]
gi|254239405|ref|ZP_04932727.1| hypothetical protein PA2G_00018 [Pseudomonas aeruginosa 2192]
gi|313105999|ref|ZP_07792260.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
gi|9946962|gb|AAG04437.1|AE004537_2 probable outer membrane protein precursor [Pseudomonas aeruginosa
PAO1]
gi|126166115|gb|EAZ51626.1| hypothetical protein PACG_00018 [Pseudomonas aeruginosa C3719]
gi|126192783|gb|EAZ56846.1| hypothetical protein PA2G_00018 [Pseudomonas aeruginosa 2192]
gi|218773218|emb|CAW29030.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|310878762|gb|EFQ37356.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
Length = 293
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 10/174 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G AS+ K L + K LD E + + + + R + +
Sbjct: 121 GASSASKASGKPAL-------VQQKVTKEWLDAHEKALREAIAGSEFTLERRDNALIVIA 173
Query: 77 PVHVSFVSE--VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
P SF + L L L +A + P + I + HTDS G+ N +S ERA
Sbjct: 174 PADYSFNPKRHTMLMPITLNPLGKVAKMAQADPQSGILVLGHTDSTGSKAVNDKLSFERA 233
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ + + ++G P N + GR N+R+E+ R ++
Sbjct: 234 QSVAAIFRL-SGLKGDQLRLKGVGSDMPRADNASAAGRAQNRRVEVLYTQRASL 286
>gi|301384367|ref|ZP_07232785.1| ompA family protein [Pseudomonas syringae pv. tomato Max13]
gi|302133682|ref|ZP_07259672.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
Length = 320
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 80 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 139
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 140 TRLAKVVEGDQKTAVLILGHADTSGPTEGNQKISQERAQSVAAIFRL-SGLERNRLSQRG 198
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 199 MGAVMPRAANDSLEGRALNRRVEILMTPQDTMR 231
>gi|184159409|ref|YP_001847748.1| outer membrane protein [Acinetobacter baumannii ACICU]
gi|332876249|ref|ZP_08444024.1| outer membrane protein Omp38 [Acinetobacter baumannii 6014059]
gi|183211003|gb|ACC58401.1| Outer membrane protein [Acinetobacter baumannii ACICU]
gi|322509321|gb|ADX04775.1| Outer membrane protein omp38 precursor [Acinetobacter baumannii
1656-2]
gi|323519348|gb|ADX93729.1| Outer membrane protein [Acinetobacter baumannii TCDC-AB0715]
gi|332735521|gb|EGJ66573.1| outer membrane protein Omp38 [Acinetobacter baumannii 6014059]
Length = 356
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 208 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 267
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR
Sbjct: 268 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAM 327
Query: 175 NQRI 178
N+R+
Sbjct: 328 NRRV 331
>gi|332992377|gb|AEF02432.1| flagellar motor protein MotB [Alteromonas sp. SN2]
Length = 309
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 7/167 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ S + + K + Q Q+ D + + +G +T I + S
Sbjct: 128 QSQQTATDQSSSESQSSDQTQTAELMKKVAQQLQKQILDGAVELESLGQQLTIRIRENGS 187
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADV 136
F FL+ +F P+L+ I +L P I I H+D ++N +S +RA
Sbjct: 188 FSAGSAFLQPQFQPILRKIGVLLADVPG-EIEISGHSDGQHIANELYRSNWDLSSQRAVA 246
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYP-IDTNDTKVGRQNNQRIEIQI 182
+ + +SV G A P ++ T R N+R+EI I
Sbjct: 247 VAEAMRTAPGFDESRMSVVGKADTDPMVEDATTPADRARNRRVEINI 293
>gi|295696765|ref|YP_003590003.1| OmpA/MotB domain protein [Bacillus tusciae DSM 2912]
gi|295412367|gb|ADG06859.1| OmpA/MotB domain protein [Bacillus tusciae DSM 2912]
Length = 266
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 7/139 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFP 107
+ + Q Q +VV + + + F + L+ + +L + L +
Sbjct: 111 QLQSFIQKQGVAGQVVVEDKPKGLLISLRDVILFDTGKADLKPEARKLLDGLLPFLAQVG 170
Query: 108 STVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + I+ HTD+ +N +S RA + YL + + +S G+ P+
Sbjct: 171 N-PLEIEGHTDNRPIHTAQFPSNWELSTARALTVLEYLQAK-GIDPKRLSATGYGEWRPV 228
Query: 164 DTNDTKVGRQNNQRIEIQI 182
+ND G+ N+R+ I I
Sbjct: 229 ASNDNPEGQALNRRVNITI 247
>gi|288800219|ref|ZP_06405677.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039]
gi|288332432|gb|EFC70912.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039]
Length = 283
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + ++ + ++ + + + L IA I+ + + I+ +TD++
Sbjct: 139 VDVQVLKGVVYISLADNMLYKSGSYEINDRAAETLSKIAKIITDYKDYDVLIEGNTDNVP 198
Query: 122 TLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NN +S RA + YL + + ++ G PI N+T++G+Q N+R
Sbjct: 199 IARENIRNNWDLSCLRASSVVQYLQTHYGVNPKRLTAGGRGEYNPIANNNTELGKQRNRR 258
Query: 178 IEIQIFPR 185
+I I P+
Sbjct: 259 TQIIITPK 266
>gi|256420785|ref|YP_003121438.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256035693|gb|ACU59237.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 586
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ V+E L P L + +L P I I +HTD+ G+ N +S
Sbjct: 467 NTAITMQEIYYEVNEFILTPASHPALDKLVALLKDHPQMEIEISAHTDNTGSAAYNQQLS 526
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQIFP 184
++RA +YL+ + + + +G+ P+ N D GR+ N+RIE++I
Sbjct: 527 EKRALNCVAYLVDK-GIDKKRLQYKGYGATKPVAPNTNPDGTDNPEGRRLNRRIELRILK 585
Query: 185 R 185
+
Sbjct: 586 Q 586
>gi|319940886|ref|ZP_08015225.1| OmpA domain-containing protein [Sutterella wadsworthensis 3_1_45B]
gi|319805768|gb|EFW02549.1| OmpA domain-containing protein [Sutterella wadsworthensis 3_1_45B]
Length = 176
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 51/167 (30%), Gaps = 23/167 (13%)
Query: 16 SGCGLASREKKKVFLH-KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
SGC S ++ + LD A
Sbjct: 19 SGCSSVSLDEGNKAGTLAGEQSAAQTTAVNPFLDPANP---------------------L 57
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
Y + ++ +++ A L P I IQ +TD G + NL + Q+R+
Sbjct: 58 YHRSVYFAFDSYEVSPEYAAVVEAHAKWLAANPEVKIVIQGNTDERGGREYNLALGQKRS 117
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + L + I F + PI ++ N+R +I
Sbjct: 118 EAVLQRLQLL-GIPSSRIEAVSFGKEKPIALGHSEEAWAQNRRADIV 163
>gi|329893686|ref|ZP_08269820.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma
proteobacterium IMCC3088]
gi|328923613|gb|EGG30925.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma
proteobacterium IMCC3088]
Length = 182
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 68/180 (37%), Gaps = 4/180 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++L F+ ++ C + K+ + + + A+ +
Sbjct: 7 FRQLVTVAFLSVFLAACA--GNDTKEQEAAAAQAAAEAAAQAEADAAAAQAAKERAEAQV 64
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ R+ D V L +L +L + ++ HTD G
Sbjct: 65 AAELRRLQDDARMAGSVVYFEFDSSTLTDTGRAVLDKHVALLK-NTGASVRLEGHTDERG 123
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
T + N+ + + RA+ ++ Y++ +G+ R S+ F + P+ ++V N+R+EI+
Sbjct: 124 TREYNMALGERRANAVRDYMMVKGIPGYRLESIS-FGEEKPVSYGSSEVSWSQNRRVEIK 182
>gi|326571329|gb|EGE21346.1| OmpA family protein [Moraxella catarrhalis BC8]
Length = 551
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 11/179 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI------ 72
+ K+ N ++ + + +GD +
Sbjct: 356 ATTPEDVAKLVEGAKNILPADFTVEAEPELDINTAVADSIETARVAIVALGDTVEENEMD 415
Query: 73 ----TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
V + + ++ +L L A L P T + I HTD+ GT + N
Sbjct: 416 ILINALNTQVINFALDSTEIPQENKEILDLAAEKLKAVPETTLRIIGHTDTQGTHEYNQD 475
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S+ RA +K YL+ +GV++ R ++ +G ++ YP+ +N T+ GR N+RIE +F G
Sbjct: 476 LSESRAAAVKEYLVSKGVAAER-LNTQGASFDYPVASNATEQGRFQNRRIEFVLFQEGE 533
>gi|262384794|ref|ZP_06077926.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262293510|gb|EEY81446.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 277
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 6/153 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
N++ + L +D + V+ + + + F ++K+ L
Sbjct: 117 AQNEKVQNLLSSVKDALLG-FNSDELTVTEKNGKVYVAMSDKLLFQSGSAKVDKRGKEAL 175
Query: 97 QLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+A +LNK + I+ HTDS K+N +S RA + L + + I
Sbjct: 176 AKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQI 235
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+ N+T GR N+R EI + P+
Sbjct: 236 QPCGRGEFMPVADNETADGRSKNRRTEIIMAPK 268
>gi|119476294|ref|ZP_01616645.1| flagellar motor protein [marine gamma proteobacterium HTCC2143]
gi|119450158|gb|EAW31393.1| flagellar motor protein [marine gamma proteobacterium HTCC2143]
Length = 344
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 73/176 (41%), Gaps = 7/176 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ ++ + F K ++ L+ + V + +
Sbjct: 89 AENDGDNSGSSANEQSERGALPAEFEQINQKIDEALGGLLKSNQVTVRGSEKWLEVELKS 148
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQER 133
+ F + L + +L+ IA+IL + I ++ TD+ +N +S R
Sbjct: 149 SLLFGSGDSTLSVPAVGVLESIASILKD-QTNPIRVEGFTDNQPINSVRYPSNWELSAGR 207
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
A + + I+ G+S++R ++ G+ P+ ND++ GR N+R+ + I G ++
Sbjct: 208 ASAVVKFFIEEGLSADR-LAAIGYGEHQPVTDNDSEEGRAENRRVVLMISKTGELR 262
>gi|238790499|ref|ZP_04634268.1| Peptidoglycan-associated lipoprotein [Yersinia frederiksenii ATCC
33641]
gi|238721443|gb|EEQ13114.1| Peptidoglycan-associated lipoprotein [Yersinia frederiksenii ATCC
33641]
Length = 168
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 58/181 (32%), Gaps = 19/181 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + I+ C + S ++ +LQ
Sbjct: 6 VLKGLMLALPV-LAIAACSSNKSANNDQSGMGAGTGTENGSNMSS--EEQARLQMQELQK 62
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + F ML A L PS + ++ H D
Sbjct: 63 NNI---------------VYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER 107
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 108 GTPEYNIALGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVL 166
Query: 181 Q 181
Sbjct: 167 V 167
>gi|206603127|gb|EDZ39607.1| Putative flagellar motor protein (OmpA/MotB) [Leptospirillum sp.
Group II '5-way CG']
Length = 261
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 6/159 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKK 91
S + + + Q + + V + + I I F S + +K
Sbjct: 74 STPGKASPQVQSVMIQAMQLLVQKSSEKGDMKVVQTKEGIVLRIQSRFLFASGHARVRRK 133
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVS 147
+P+L+ IA +L + + I + +TD+ +N +S RA + + L++ G
Sbjct: 134 AVPVLRKIAALLART-NHEIRVHGYTDNQPIRTSRYPSNWALSTMRAVNVLTRLLEYGSI 192
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ GF PI +N T GR+ N+R+EI I R
Sbjct: 193 DPGRMGAAGFGKFRPIASNLTPEGREKNRRVEILIMNRE 231
>gi|170691332|ref|ZP_02882497.1| peptidoglycan-associated lipoprotein [Burkholderia graminis C4D1M]
gi|170143537|gb|EDT11700.1| peptidoglycan-associated lipoprotein [Burkholderia graminis C4D1M]
Length = 169
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 60/184 (32%), Gaps = 21/184 (11%)
Query: 1 MIKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M+ +L ++ ++ ++ C + + + T
Sbjct: 1 MMSKLRFAFAVLMVGALAACHSGVKLDENANKGGAVSTQPNPNDVAQ------------- 47
Query: 59 QDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + D ++ + +LQ + L P + IQ +T
Sbjct: 48 ----VNVDPLNDPNSPLAKRSIYFDFDSYSVKDDYQSLLQQHSQYLKSHPQRHVLIQGNT 103
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ + ++ + + P T + N+R
Sbjct: 104 DERGTSEYNLALGQKRAEAVRR-SLSLMGVTDSQMEAVSLGKEKPQATGHDESSWAQNRR 162
Query: 178 IEIQ 181
++
Sbjct: 163 ADLV 166
>gi|167851058|ref|ZP_02476566.1| hypothetical protein BpseB_37821 [Burkholderia pseudomallei B7210]
Length = 415
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V D + F + +++P+L +A LN+
Sbjct: 263 RVAKFLEPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNQVQ 322
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +TD +N +S+ERA + LI + I+ G P+
Sbjct: 323 G-NVRVSGYTDDTPVHTARFASNWDLSRERAQAV-RSLIAARLDRPERITAEGRGTLDPV 380
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
ND+ R N+R+EI +
Sbjct: 381 APNDSPANRARNRRVEITLM 400
>gi|107100492|ref|ZP_01364410.1| hypothetical protein PaerPA_01001517 [Pseudomonas aeruginosa PACS2]
Length = 281
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 10/174 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G AS+ K L + K LD E + + + + R + +
Sbjct: 109 GASSASKASGKPAL-------VQQKVTKEWLDAHEKALREAIAGSEFTLERRDNALIVIA 161
Query: 77 PVHVSFVSE--VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
P SF + L L L +A + P + I + HTDS G+ N +S ERA
Sbjct: 162 PADYSFNPKRHTMLMPITLNPLGKVAKMAQADPQSGILVLGHTDSTGSKAVNDKLSFERA 221
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ + + ++G P N + GR N+R+E+ R ++
Sbjct: 222 QSVAAIFRL-SGLKGDQLRLKGVGSDMPRADNASAAGRAQNRRVEVLYTQRASL 274
>gi|312131656|ref|YP_003998996.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311908202|gb|ADQ18643.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 418
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 10/174 (5%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLD------KAEDEFQMQLQDTGIVVSRIGDM 71
C A E+ V + + + K + E+E ++D V +
Sbjct: 249 CSSAPEEETLVVEQPTISSPDIEKTLPGGVKLSYTETSIENELINFIEDNSKAVDKETW- 307
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
++ + IA IL +P I I +TD+ G+ + N +S
Sbjct: 308 --FNFRKLTFEQGSALIDASSQKEVDNIAEILKAYPDVNIKIGGYTDNTGSDEINTKLSA 365
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
ERA + + L+ RG+ ++R S G+ +PI N T+ GR+ ++RI +++ +
Sbjct: 366 ERAANVLAALVDRGIEASRLES-EGYGPLHPIADNSTEEGREQDRRIAVRVTKK 418
>gi|167837695|ref|ZP_02464578.1| outer membrane protein, OmpA family [Burkholderia thailandensis
MSMB43]
Length = 170
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 62/184 (33%), Gaps = 21/184 (11%)
Query: 1 MIKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K+L L+ M ++ ++ C + + + T +
Sbjct: 2 MSKKLRLAFAMLMIGALAACKSGVKLDEHANQGGAVSTQPNPENVAQ------------- 48
Query: 59 QDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + D ++ ++ +LQ A L P I IQ +T
Sbjct: 49 ----VTVDPLNDPNSPLAKRSVYFDFDSYSVQDQYQSLLQQHAQYLKSHPQRHILIQGNT 104
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ + + + + P+ + N+R
Sbjct: 105 DERGTSEYNLALGQKRAEAVRR-ALSLLGVGDAQMEAVSLGKEKPVALGHDEASWAQNRR 163
Query: 178 IEIQ 181
++
Sbjct: 164 ADLV 167
>gi|254246221|ref|ZP_04939542.1| OmpA/MotB [Burkholderia cenocepacia PC184]
gi|124870997|gb|EAY62713.1| OmpA/MotB [Burkholderia cenocepacia PC184]
Length = 183
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 67/185 (36%), Gaps = 22/185 (11%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+ L L++ +++ ++ C + K + T
Sbjct: 14 MMSNKARLALAVMMISALAACKSGVKLDDKANNAGAVSTQPSADNVAQ------------ 61
Query: 58 LQDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V + D ++ ++ P++Q A L P + IQ +
Sbjct: 62 -----VNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGN 116
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD GT + NL + Q+RA+ ++ + GV+ ++ +V + P T + N+
Sbjct: 117 TDERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNR 175
Query: 177 RIEIQ 181
R ++
Sbjct: 176 RADLV 180
>gi|325103802|ref|YP_004273456.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324972650|gb|ADY51634.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 633
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++ ++ L ++ LN+ + I IQ HTD+IG K N ++S+ R
Sbjct: 523 VILKNIFFDTNKYDIKDDSKSELAILIDFLNENKTVNIEIQGHTDNIGDDKANFVLSENR 582
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + ++ + +GF PID+ND +GR NN+R E I
Sbjct: 583 AKSVLK-YLVNEGIDSKRLRYKGFGETAPIDSNDNIIGRANNRRTEFLII 631
>gi|94309565|ref|YP_582775.1| OmpA/MotB [Cupriavidus metallidurans CH34]
gi|93353417|gb|ABF07506.1| putative OmpA/MotB (family of outer membrane porins precursor)
[Cupriavidus metallidurans CH34]
Length = 572
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 46/106 (43%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L +L ++ P + + HTDS+G + NL +S+ RA ++
Sbjct: 446 SLFKSGSALLNLGSNRVLIGALEMIKAHPDKRVLVAGHTDSVGDSRANLKLSEARAASVR 505
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+L +++G+ P N+ + GR N+R+EI + P
Sbjct: 506 DWLADAADLPVTRFAIQGYGETRPKAPNEPEAGRAANRRVEITLVP 551
>gi|303240000|ref|ZP_07326522.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
gi|302592479|gb|EFL62205.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
Length = 261
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 69/166 (41%), Gaps = 6/166 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ + K + DT+ K ++ + D + V + + I +
Sbjct: 95 TNNESKSGSNADYDTENKQKAITEFKEEVQALISGLKIDEYVHVVDVKTSVILRIDSAIL 154
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADV 136
F + +++ L+ + +++K +T IA+ HTD+I + N +S RA
Sbjct: 155 FDVGKADIKESGKDTLKKVGELMDKL-NTNIAVMGHTDNIPINTSLFPSNWELSTRRATN 213
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +L+ + ++ G PI ND++ RQ N+R++I I
Sbjct: 214 VVVFLVNECNLNPTKLTATGNGEFRPIAPNDSEENRQKNRRVDIVI 259
>gi|298377743|ref|ZP_06987694.1| flagellar motor protein MotB [Bacteroides sp. 3_1_19]
gi|298265446|gb|EFI07108.1| flagellar motor protein MotB [Bacteroides sp. 3_1_19]
Length = 280
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 6/153 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
N + + L +D + V+ + + + F ++K+ L
Sbjct: 120 AQNAKVQNLLSSVKDALLG-FNSDELTVTEKNGKVYVAMSDKLLFQSGSAKVDKRGKEAL 178
Query: 97 QLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+A +LNK + I+ HTDS K+N +S RA + L + + I
Sbjct: 179 AKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQI 238
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+ N+T GR N+R EI + P+
Sbjct: 239 QPCGRGEFMPVADNETADGRSKNRRTEIIMAPK 271
>gi|238797729|ref|ZP_04641223.1| Peptidoglycan-associated lipoprotein [Yersinia mollaretii ATCC
43969]
gi|238718370|gb|EEQ10192.1| Peptidoglycan-associated lipoprotein [Yersinia mollaretii ATCC
43969]
Length = 177
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 19/181 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + ++ C + S ++ +LQ
Sbjct: 15 VLKGLMLALPV-LAVAACSSNKSANNDQSGMGAGTGTENGSNLSS--EEQARLQMQELQK 71
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + F ML A L PS + ++ H D
Sbjct: 72 NNI---------------VYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER 116
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 117 GTPEYNIALGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVL 175
Query: 181 Q 181
Sbjct: 176 V 176
>gi|193215633|ref|YP_001996832.1| OmpA/MotB domain-containing protein [Chloroherpeton thalassium ATCC
35110]
gi|193089110|gb|ACF14385.1| OmpA/MotB domain protein [Chloroherpeton thalassium ATCC 35110]
Length = 398
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ V + L + + + I +++ +++ HTDS G +N +S++R
Sbjct: 290 IVVNGIKFDVGKATLRPESIGPINEIYSLMKAHADIKFSVEGHTDSDGDASSNQTLSEQR 349
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
A + LI R S + +GF P+DTNDT G+ NN+R+E
Sbjct: 350 AKSVMDELI-RMGISADRLKFKGFGESKPVDTNDTPEGKANNRRVEFV 396
>gi|115373102|ref|ZP_01460404.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
gi|310824354|ref|YP_003956712.1| chemotaxis protein MotB [Stigmatella aurantiaca DW4/3-1]
gi|115369858|gb|EAU68791.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
gi|309397426|gb|ADO74885.1| chemotaxis protein MotB [Stigmatella aurantiaca DW4/3-1]
Length = 273
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 61/158 (38%), Gaps = 5/158 (3%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKF 92
+ ++ + + + ++ D I +S + +T + + F S + K+
Sbjct: 113 AEAKEALEKRSAEYENLAQSLKQEISDGKIQLSELQGRMTVQLKDKILFASGSTRVGKEG 172
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG----VSS 148
L IA L +I ++ HTD + T KN S + ++ + R
Sbjct: 173 QEALAKIADALKSVQGRIIRVEGHTDDVPTDKNGPFPSNWELSLARAMAVVRALQDAGVD 232
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S G+ PI ND+ R N+RIEI + +
Sbjct: 233 PTVLSAAGYGQYQPIAANDSAENRSLNRRIEIVLAAKA 270
>gi|94970975|ref|YP_593023.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
versatilis Ellin345]
gi|94553025|gb|ABF42949.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
versatilis Ellin345]
Length = 407
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + ++ L+ + L + +L S + +Q HTD++GT N +S+ R
Sbjct: 293 VAIYGVLFDFNKATLQPESDGPLGQVGALLTANSSLNVEVQGHTDNVGTDAYNQTLSEAR 352
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
A + + + + ++ +G+ P+ N T GR N+R+EI
Sbjct: 353 AKSVM-TWLTQHGVAPGRMTAKGYGKTMPVADNKTDDGRMKNRRVEI 398
>gi|238793898|ref|ZP_04637518.1| Peptidoglycan-associated lipoprotein [Yersinia intermedia ATCC
29909]
gi|238726801|gb|EEQ18335.1| Peptidoglycan-associated lipoprotein [Yersinia intermedia ATCC
29909]
Length = 177
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 58/181 (32%), Gaps = 19/181 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + I+ C + S ++ +LQ
Sbjct: 15 VLKGLMLALPV-LAIAACSSNKSANNDQSGMGAGTGTENGSNLSS--EEQARLQMQELQK 71
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + F ML A L PS + ++ H D
Sbjct: 72 NNI---------------VYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER 116
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 117 GTPEYNIALGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVL 175
Query: 181 Q 181
Sbjct: 176 V 176
>gi|308173338|ref|YP_003920043.1| motility protein MotB [Bacillus amyloliquefaciens DSM 7]
gi|307606202|emb|CBI42573.1| motility protein B; MotB component of the stator flagellum complex
[Bacillus amyloliquefaciens DSM 7]
gi|328911414|gb|AEB63010.1| motility protein B; MotB component of the stator flagellum complex
[Bacillus amyloliquefaciens LL3]
Length = 267
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
+ + + + + + + + I + F + + ++ +P+
Sbjct: 106 AADRQELEGVQKQVNQFIKNKKLEHQLETKLTKEGLLITIKDSIFFDSGQAVIRQEDIPL 165
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ I+ +L P I I HTD++ ++N +S RA + L + +
Sbjct: 166 AKEISNLLVLNPPRNIIISGHTDNVPIKNSQFQSNWHLSVMRAVNFMAILTENPKLDAKV 225
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +GF P +N T GR N+R+E+ I PR
Sbjct: 226 FSAKGFGEYKPAASNKTAEGRSKNRRVEVLIQPRN 260
>gi|317051549|ref|YP_004112665.1| OmpA/MotB domain-containing protein [Desulfurispirillum indicum S5]
gi|316946633|gb|ADU66109.1| OmpA/MotB domain protein [Desulfurispirillum indicum S5]
Length = 252
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 65/168 (38%), Gaps = 12/168 (7%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG------IVVSRIGDMITCYIPV 78
+ +V T + + +++ + Q +Q TG + + + I +
Sbjct: 66 QTEVSPVPVVVTAQIQEVEQIQMEEVINAIQAMVQVTGLEDSVEVDSQQDTEGIKVTLAE 125
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQER 133
+ F ++ P+L +A I+++ + I+ HTD++ N +S R
Sbjct: 126 EILFDRGRAEIKPAAFPILDQLAAIIHQ-SKRKVRIEGHTDNVQVPASRYPTNWELSTAR 184
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + Y +Q R G+ P+ N T+ R N+R+EI
Sbjct: 185 SVNVVKYFVQARNLDPRIFVAAGYGEFSPVVPNITESNRAKNRRVEIY 232
>gi|300770791|ref|ZP_07080669.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300762348|gb|EFK59166.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 440
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ G L AE + ++ +V ++ I + + +
Sbjct: 297 TPSGTKVDGSGCPLPVAETKVVEKI----VVTEEDRKVVDEAIKNLEFDLGKSTIRSTSY 352
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
P L +A++L + + + + HTD+ G++K NL +S+ERA+ +K+YL +G + +R I
Sbjct: 353 PSLDRVASLLIE-KNFSLKLAGHTDNTGSMKTNLRLSKERAEAVKAYLSGKGANPSR-IE 410
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G+ PI +N T GRQ N+R+E +
Sbjct: 411 ATGYGPNQPIASNATAEGRQQNRRVEFTL 439
>gi|229523853|ref|ZP_04413258.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae bv. albensis VL426]
gi|229337434|gb|EEO02451.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae bv. albensis VL426]
Length = 172
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 65/181 (35%), Gaps = 15/181 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ + ++ C + V+ + L+ + +L++
Sbjct: 6 VLKSLLIALPV-LAVTACSSSDDAANSGSQTNQ---SAVSTVDSNGLNAQGQLTEQELKE 61
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A L K PS + I+ H D
Sbjct: 62 QALRENQT----------IYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADER 111
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT ++N+ + + RA + ++ +S+ + + P+ ++ N+R +
Sbjct: 112 GTPEHNIALGERRAQAVAK-YLEALGVQAGQLSIVSYGEEKPLVLGQSEEAYAKNRRAVL 170
Query: 181 Q 181
Sbjct: 171 V 171
>gi|227538391|ref|ZP_03968440.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227241773|gb|EEI91788.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 440
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ G L AE + ++ +V ++ I + + +
Sbjct: 297 TPSGTKVDGSGCPLPVAETKVVEKI----VVTEEDRKVVDEAIKNLEFDLGKSTIRSTSY 352
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
P L +A++L + + + + HTD+ G++K NL +S+ERA+ +K+YL +G + +R I
Sbjct: 353 PSLDRVASLLIE-KNFSLKLAGHTDNTGSMKTNLRLSKERAEAVKAYLSGKGANPSR-IE 410
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G+ PI +N T GRQ N+R+E +
Sbjct: 411 ATGYGPNQPIASNATAEGRQQNRRVEFTL 439
>gi|311696900|gb|ADP99773.1| flagellar motor protein MotB [marine bacterium HP15]
Length = 307
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 65/162 (40%), Gaps = 6/162 (3%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKF 92
+ ++ ++D + + D I VS I + SF L +F
Sbjct: 111 AVEAAMEEQMQETMDDILKVLEPAIADGRINVSEDQRRIVIRVEEKGSFPSGSAQLTWEF 170
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSS 148
+L +A ++ P + I+ HTD++ + N +S R+ + + L+ R
Sbjct: 171 EGLLLDMAEVIEGIPG-DLTIEGHTDNVPIRTDRFYSNWDLSAARSAAVANVLVARDQVE 229
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+SV G A P N + R N+R+EI I G +++
Sbjct: 230 PTRLSVTGLADTKPRVPNTSAENRAKNRRVEIIIDLSGPMQE 271
>gi|220922989|ref|YP_002498291.1| type IV / VI secretion system protein, DotU family
[Methylobacterium nodulans ORS 2060]
gi|219947596|gb|ACL57988.1| type IV / VI secretion system protein, DotU family
[Methylobacterium nodulans ORS 2060]
Length = 489
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 7/133 (5%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ V + + + + + +F P+LQ +A ++ + P I I HTD
Sbjct: 360 SAGRVTVEETNSQVVVRLAAALFAPGDAAVTAEFRPLLQRVAGLIAREPG-PIRIVGHTD 418
Query: 119 S----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
S G +N +S RA + + + R + V G P+ NDT GR
Sbjct: 419 SAPVRNGRFASNFDLSVARAKAVAAAIRAAPEKPER-LEVEGKGPDAPVAPNDTVEGRAR 477
Query: 175 NQRIEIQIFPRGN 187
N+R+EI + PRG+
Sbjct: 478 NRRVEI-LIPRGS 489
>gi|152984801|ref|YP_001349685.1| hypothetical protein PSPA7_4332 [Pseudomonas aeruginosa PA7]
gi|150959959|gb|ABR81984.1| probable outer membrane protein [Pseudomonas aeruginosa PA7]
Length = 293
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 63/174 (36%), Gaps = 10/174 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G A + K L + K LD E + + + + R + +
Sbjct: 121 GASSAGKASGKPAL-------VQQKVTKEWLDAHEKALREAIAGSEFTLERRDNALIVIA 173
Query: 77 PVHVSFVSE--VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
P SF + L L L +A + P + I + HTDS G+ N +S ERA
Sbjct: 174 PADYSFNPKRHTMLMPITLNPLGKVAKMAQADPQSGILVLGHTDSTGSKAVNDKLSFERA 233
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ + + ++G P N + GR N+R+E+ R ++
Sbjct: 234 QSVAAIFRL-SGLKGDQLRLKGVGSDMPRADNSSAAGRAQNRRVEVLYTQRASL 286
>gi|296878139|ref|ZP_06902154.1| chemotaxis protein MotB [Clostridium difficile NAP07]
gi|296430892|gb|EFH16724.1| chemotaxis protein MotB [Clostridium difficile NAP07]
Length = 248
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 56/141 (39%), Gaps = 6/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
++ + + + + + + F + ++ + I +LN+
Sbjct: 95 EEIQKYLNENGMANSVSLRVQDRGLVISLKDTILFDTGKAVVKDNSREKIIQIGKMLNEM 154
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
S I ++ HTD++ K+N +S RA + LI + +S G+ P
Sbjct: 155 NSY-IRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDKLSAVGYGEFRP 213
Query: 163 IDTNDTKVGRQNNQRIEIQIF 183
I N ++ GR N+R++I +
Sbjct: 214 IAENSSEEGRSKNRRVDIVLV 234
>gi|229029408|ref|ZP_04185491.1| OmpA/MotB domain protein [Bacillus cereus AH1271]
gi|228731867|gb|EEL82766.1| OmpA/MotB domain protein [Bacillus cereus AH1271]
Length = 227
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 57/144 (39%), Gaps = 9/144 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D + + + GI V R + + + + ++ + ++ +
Sbjct: 83 MDDLYKKLKAYVDSNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGF 142
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS N +S RA + +LI+ ++ ++ G+A
Sbjct: 143 FQSVPN-PIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNVEDKRLAAVGYA 201
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ ND+ + N+R+ I I
Sbjct: 202 DTKPVVPNDSPQNWEKNRRVVIYI 225
>gi|169632496|ref|YP_001706232.1| putative Outer membrane protein precursor (OmpA-like)
[Acinetobacter baumannii SDF]
gi|169151288|emb|CAO99984.1| putative Outer membrane protein precursor (OmpA-like)
[Acinetobacter baumannii]
Length = 357
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
T + + + V F + + ++ ++ P + +A L+++P+ I+ HTD+
Sbjct: 214 TPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDN 273
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G K N +S RA+ +KS L+ +S +GFA+ PI N TK GR N+R+
Sbjct: 274 TGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRV 332
>gi|303248999|ref|ZP_07335244.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
gi|302489585|gb|EFL49525.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
Length = 317
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 15/177 (8%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + + K +S T K + + L + + + + + +
Sbjct: 144 AESVKAETKAPAPESERTGPTRKSLEDIRKELTAKLG--LDTSAVEIVPRENGVELNLRG 201
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQER 133
F + ++ LP+L+ IA L+ P + ++ HTD++ N +S R
Sbjct: 202 AAFFDLASAEIKPAALPLLRDIAATLSGTP-YKVTVEGHTDNLPIESWLYPSNWELSSAR 260
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR------QNNQRIEIQIFP 184
A + +LI + V G A P+ ND + GR N+R+ I + P
Sbjct: 261 ASRVARFLIDG-GVPRNHLRVEGLADTQPVAPNDDEAGRPIPENQAKNRRVVILVSP 316
>gi|299770927|ref|YP_003732953.1| OmpA family protein [Acinetobacter sp. DR1]
gi|298701015|gb|ADI91580.1| OmpA family protein [Acinetobacter sp. DR1]
Length = 471
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 4/179 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ L + + + +SL ++ + +
Sbjct: 295 KITLKAGDAAALEALTAKVKALVPHTEVVGAAPVTAEQSVSNSLTASQTAL-GSIDPNNV 353
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V+ + + I + +L AT+LNK S + + HTDS G
Sbjct: 354 DVNALVKALNLQIIN--FASGSSDIPADNKAILDQAATLLNKVTSVKLNVGGHTDSTGNA 411
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA + YL +GV +++ + G P+ N T+ GR N+RIE +
Sbjct: 412 AANKALSQRRAQAVVDYLKSKGVDASKLV-AEGHGSDQPVAENTTEEGRFKNRRIEFSV 469
>gi|192358872|ref|YP_001981881.1| putative agglutination protein [Cellvibrio japonicus Ueda107]
gi|190685037|gb|ACE82715.1| probable agglutination protein [Cellvibrio japonicus Ueda107]
Length = 599
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADV 136
+ V L+ L + + P V I ++ HTD+ GT N+ +S+ RA
Sbjct: 491 DALFDVGSSVLKPGATQKLDALIAQIKNTPKVVGIRVEGHTDNTGTDALNIPLSKARAQR 550
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ Y + N +SV GF P+ N+T+ GR N+R+EI I +
Sbjct: 551 VRDYAVLN-GLENIPVSVDGFGASRPVADNNTEAGRAANRRVEISITRQ 598
>gi|108758523|ref|YP_629116.1| putative chemotaxis protein MotB [Myxococcus xanthus DK 1622]
gi|108462403|gb|ABF87588.1| putative chemotaxis protein MotB [Myxococcus xanthus DK 1622]
Length = 267
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 6/157 (3%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKF 92
++ S + + ++ D I +S + +T + + F + K+
Sbjct: 112 AQAKEELEKRSSEYENLAQSLKQEISDGKIELSELKGKMTVQLKDKILFASGSARVGKEG 171
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSS 148
L+ IA L +I ++ HTD + G +N +S RA + +Q
Sbjct: 172 EEALKKIADALKTVQGKIIRVEGHTDDVPTGGGQFPSNWELSLARAMAVVR-SLQNAGVD 230
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
F+S G+ PI ND+ R N+RIEI + P+
Sbjct: 231 PTFLSAAGYGQYQPIAANDSAENRSLNRRIEIVLAPK 267
>gi|77457455|ref|YP_346960.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77381458|gb|ABA72971.1| putative outer membrane protein [Pseudomonas fluorescens Pf0-1]
Length = 364
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 3/165 (1%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K K + LD E + ++D+ + + R +++ PV SF +
Sbjct: 115 GKEQDTAKVVPMPDPKVTQAWLDDYEPRLRTAIKDSNLQLERRENVLVVTAPVEGSFNPD 174
Query: 86 --VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L L +A IL P T + + H+D+ G N+ +SQERA + +
Sbjct: 175 RPAMLLPVTLGPFTRVAKILEADPKTAVLVLGHSDTTGAAPANVKLSQERAQAVAAIFRL 234
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
G+ +R + +RG + P ND+ GR N+R+E+ + P+ +
Sbjct: 235 SGLQRDRLM-LRGMGSEAPRAANDSVEGRALNRRVELLVTPQNTM 278
>gi|53716349|ref|YP_105194.1| hypothetical protein BMAA0398 [Burkholderia mallei ATCC 23344]
gi|53723119|ref|YP_112104.1| hypothetical protein BPSS2105 [Burkholderia pseudomallei K96243]
gi|67642591|ref|ZP_00441345.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|121596826|ref|YP_991186.1| hypothetical protein BMASAVP1_1592 [Burkholderia mallei SAVP1]
gi|124382978|ref|YP_001025575.1| hypothetical protein BMA10229_1777 [Burkholderia mallei NCTC 10229]
gi|126443591|ref|YP_001063957.1| hypothetical protein BURPS668_A2966 [Burkholderia pseudomallei 668]
gi|126447095|ref|YP_001077649.1| hypothetical protein BMA10247_A0447 [Burkholderia mallei NCTC
10247]
gi|126458045|ref|YP_001076870.1| hypothetical protein BURPS1106A_A2841 [Burkholderia pseudomallei
1106a]
gi|167821238|ref|ZP_02452918.1| hypothetical protein Bpse9_39318 [Burkholderia pseudomallei 91]
gi|167829581|ref|ZP_02461052.1| hypothetical protein Bpseu9_38230 [Burkholderia pseudomallei 9]
gi|167908000|ref|ZP_02495205.1| hypothetical protein BpseN_37601 [Burkholderia pseudomallei NCTC
13177]
gi|226193911|ref|ZP_03789512.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|237508208|ref|ZP_04520923.1| OmpA-family protein [Burkholderia pseudomallei MSHR346]
gi|242312724|ref|ZP_04811741.1| ompA family protein [Burkholderia pseudomallei 1106b]
gi|254177324|ref|ZP_04883980.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|254184501|ref|ZP_04891090.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|254194178|ref|ZP_04900610.1| ompA family protein [Burkholderia pseudomallei S13]
gi|254203138|ref|ZP_04909500.1| ompA family protein [Burkholderia mallei FMH]
gi|254208472|ref|ZP_04914821.1| ompA family protein [Burkholderia mallei JHU]
gi|254300798|ref|ZP_04968242.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|254359345|ref|ZP_04975617.1| ompA family protein [Burkholderia mallei 2002721280]
gi|52213533|emb|CAH39585.1| putative outer membrane porin protein [Burkholderia pseudomallei
K96243]
gi|52422319|gb|AAU45889.1| ompA family protein [Burkholderia mallei ATCC 23344]
gi|121224624|gb|ABM48155.1| ompA family protein [Burkholderia mallei SAVP1]
gi|126223082|gb|ABN86587.1| ompA family protein [Burkholderia pseudomallei 668]
gi|126231813|gb|ABN95226.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|126239949|gb|ABO03061.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|147746183|gb|EDK53261.1| ompA family protein [Burkholderia mallei FMH]
gi|147751159|gb|EDK58227.1| ompA family protein [Burkholderia mallei JHU]
gi|148028532|gb|EDK86492.1| ompA family protein [Burkholderia mallei 2002721280]
gi|157810991|gb|EDO88161.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|160698364|gb|EDP88334.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|169650929|gb|EDS83622.1| ompA family protein [Burkholderia pseudomallei S13]
gi|184215093|gb|EDU12074.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|225933856|gb|EEH29842.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|235000413|gb|EEP49837.1| OmpA-family protein [Burkholderia pseudomallei MSHR346]
gi|238523774|gb|EEP87210.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|242135963|gb|EES22366.1| ompA family protein [Burkholderia pseudomallei 1106b]
gi|261827068|gb|ABM98527.2| ompA family protein [Burkholderia mallei NCTC 10229]
Length = 438
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V D + F + +++P+L +A LN+
Sbjct: 286 RVAKFLEPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNQVQ 345
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +TD +N +S+ERA + LI + I+ G P+
Sbjct: 346 G-NVRVSGYTDDTPVHTARFASNWDLSRERAQAV-RSLIAARLDRPERITAEGRGTLDPV 403
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
ND+ R N+R+EI +
Sbjct: 404 APNDSPANRARNRRVEITLM 423
>gi|70728655|ref|YP_258404.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
gi|68342954|gb|AAY90560.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 229
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQ 131
T I L L I T L + S + + HTDS+G+ N +S
Sbjct: 117 TIVIRDVHFHFDSAKLTDADKTKLNTIVTRLKQEASSAQLRVTGHTDSVGSDAYNQKLSD 176
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+RA + YLI G+ + F+SV G P+ N T GR N+R EIQI
Sbjct: 177 KRAHSVVEYLISNGIPRSSFVSVTGAGESKPVADNKTAEGRAMNRRTEIQI 227
>gi|330975634|gb|EGH75700.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 250
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 76/204 (37%), Gaps = 39/204 (19%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSND--------------------------- 35
+ L + + +SGC ++ + S
Sbjct: 5 RRLIIVATAVAMLSGCATSNPYDNQGQAQSSGGMSKTAKYGGLGALAGAVAGAAIDHNHR 64
Query: 36 ----------TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
+ +G DK E + + +TG+ V R GD I +P +++F
Sbjct: 65 GKGALIGAAVAGAASAGYGYYADKQEAALRESMANTGVEVQRQGDQIKLIMPGNITFATD 124
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ F L +A+ L +F I I +TDS G+ ++N+ +SQ+RA + +YL +
Sbjct: 125 SSAIASSFYSPLNNLASSLKQFNQNNIEIVGYTDSTGSRQHNMDLSQQRAQSVATYLTSQ 184
Query: 145 GVSSNRFISVRGFAYKYPIDTNDT 168
+SVRG PI +N
Sbjct: 185 -GVDQAHLSVRGAGPDQPIASNAD 207
>gi|302381978|ref|YP_003817801.1| peptidoglycan-associated lipoprotein [Brevundimonas subvibrioides
ATCC 15264]
gi|302192606|gb|ADL00178.1| peptidoglycan-associated lipoprotein [Brevundimonas subvibrioides
ATCC 15264]
Length = 184
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 7/173 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ L +++ C R + N + +
Sbjct: 8 KIALVGLAALSMAAC--TPRRPVTGATDGTGGAVANNPVYPGPG----NGGIDGGATGPA 61
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ D + + + + P L A L ++P + I+ + D GT
Sbjct: 62 AMGSEQDFVVNVGDRIYFDLDSYQVSPEAYPRLDAQAAWLQRYPQVQVRIEGNADERGTR 121
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+ NL + RA+ I++YLI RGV + R ++ F + PI + N+
Sbjct: 122 EYNLALGARRAESIRNYLIDRGVPAGRIDTIS-FGKERPIAQGANEDAWARNR 173
>gi|228471996|ref|ZP_04056764.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624]
gi|228276608|gb|EEK15321.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624]
Length = 278
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 5/133 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L D I V ++ I + F + + +L +A ++N P ++ H
Sbjct: 128 LDDEDITVQVDKGVVYVSISDKMLFSSGSYNVTPRAREVLGKVAKVVNNKPDFEFMVEGH 187
Query: 117 TDSIGTLKNN----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD++ +S RA + L + ++ G P+ +N + GR
Sbjct: 188 TDNVPIKNTCIKDNWDLSVLRATAVVRILQNDFGVTASRMTAAGRGEYVPVTSNASADGR 247
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 248 ALNRRTRIVVLPK 260
>gi|328553736|gb|AEB24228.1| flagellar motor protein MotB [Bacillus amyloliquefaciens TA208]
Length = 265
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
+ + + + + + + + I + F + + ++ +P+
Sbjct: 104 AADRQELEGVQKQVNQFIKNKKLEHQLETKLTKEGLLITIKDSIFFDSGQAVIRQEDIPL 163
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ I+ +L P I I HTD++ ++N +S RA + L + +
Sbjct: 164 AKEISNLLVLNPPRNIIISGHTDNVPIKNSQFQSNWHLSVMRAVNFMAILTENPKLDAKV 223
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +GF P +N T GR N+R+E+ I PR
Sbjct: 224 FSAKGFGEYKPAASNKTAEGRSKNRRVEVLIQPRN 258
>gi|262279684|ref|ZP_06057469.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202]
gi|262260035|gb|EEY78768.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202]
Length = 473
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 65/179 (36%), Gaps = 4/179 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ L + + + + +SL ++ + +
Sbjct: 297 KITLKAGDAAALEALTAKVKALVPHTEVVAAAPVTAEQSVSNSLSASQTALT-AIDPNNV 355
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V+ + + I + +L T+LNK + + HTDS G
Sbjct: 356 DVNALVKALNLQIIN--FASGSSEIPADNKAILDQAVTLLNKVSGVKLNVGGHTDSTGNA 413
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +SQ RA + YL +GV +++ + +G P+ N T GR N+RIE +
Sbjct: 414 ASNKALSQRRAQAVVDYLTSKGVDASKLV-AQGHGSDQPVAENTTDEGRFKNRRIEFSV 471
>gi|157889026|dbj|BAF80970.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
I K+ + + G ++ IG T + H F + + +
Sbjct: 176 APKTPQITTKQIEEKPQTIQIDKSCPEPRKGALLDHIGCEKTIALEGHFGF-DQTDINPE 234
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F +Q + +L + P ++ HTD+IG N +S ERA V+ +++ +
Sbjct: 235 FAQKIQEVGKVLEENPQYYTILEGHTDNIGPKAYNQKLSLERAKVVAKE-LEKTGVTKEK 293
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
I+ +G+ + P +NDTK GR N+R+E
Sbjct: 294 IATKGYGFDKPKASNDTKEGRAQNRRVE 321
>gi|153940806|ref|YP_001391525.1| chemotaxis MotB protein [Clostridium botulinum F str. Langeland]
gi|152936702|gb|ABS42200.1| chemotaxis MotB protein [Clostridium botulinum F str. Langeland]
gi|295319551|gb|ADF99928.1| chemotaxis MotB protein [Clostridium botulinum F str. 230613]
Length = 254
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 74/216 (34%), Gaps = 36/216 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHK-----------SNDTDIVNKRFGSS------- 46
L L + + + K + + + G +
Sbjct: 23 LTLLLALFIVMFAMSKVDTAKLQKASQEFNVIFKAGSNVLQEGGSGGASVGKAGISIVPS 82
Query: 47 --------LDKAEDEFQMQLQDTG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ + + + + +++ G + V D + I V F + + K+
Sbjct: 83 DSVTEDIKMKEIKSKLEKEIEKNGYSDKVKVGVDADGLEIDIQDVVLFNSGDAEVLKQSS 142
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSN 149
+L I+ +L I + HTD+ ++N +S RA + ++L G
Sbjct: 143 ALLTQISKMLKGL-DNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPA 201
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S++ + P N T+ G+ N+R+EI I +
Sbjct: 202 NKLSIQAYGEYMPKFDNATEAGKAKNRRVEISIVRK 237
>gi|332296685|ref|YP_004438607.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
gi|332179788|gb|AEE15476.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
Length = 475
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 52/165 (31%), Gaps = 2/165 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + + + + + +
Sbjct: 312 ASRDDTFGGSGDVPAGKQTQAGGDVPAGKQTQTGGGGVNTA-SLFEIEDTQQGLRLSVRD 370
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L IA +L P V ++ HT S+G + +S ERA +
Sbjct: 371 IRFRPDSAEILSEESWRLDAIADMLRSEPDAVYLVEGHTASVGKPEGEKKLSVERAQAVV 430
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ L+ RG +F+ G+ + N T GR N+R+EI I
Sbjct: 431 AALVSRGFRKEQFLFT-GYGGTRSVADNGTAAGRAENRRVEITIL 474
>gi|170720335|ref|YP_001748023.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169758338|gb|ACA71654.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 327
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLE 89
I K + LD+ E + + ++D+ + + R +++ IP S+ + L
Sbjct: 81 GPVVPKIDEKATQAWLDQYEPKLREAIKDSKLELERRENVLVVTIPADSSYNPDRPNMLL 140
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L + +A + P T + + H D+ G N +S ERA + + G+ +
Sbjct: 141 PMSLGPITRVAKAVEGDPKTAVLVLGHADTSGAAATNQKLSLERAASVSAIFRLSGLKRD 200
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
R +S++G + P ND+ GR N+R+E+ + P+ +
Sbjct: 201 R-LSLKGMGSEMPRAANDSVEGRALNRRVEMLLTPQNTM 238
>gi|145588679|ref|YP_001155276.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145047085|gb|ABP33712.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 187
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 71/184 (38%), Gaps = 2/184 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + + + T+S + + + N + +
Sbjct: 1 MNKTLKVLLASVITVSATAAMASDNWQNGDGTLNWKNGDGTLCWRDNNWTPATAAKGCDG 60
Query: 61 TGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + + ++ L+ + L IA L+K VI +TDS
Sbjct: 61 ALTAAAAGVSQSKITLQADTLYDFNKSDLKPEGKATLDKIAADLSKIKLEVIIAVGNTDS 120
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+GT N+ + Q RA +K+YL+ +GV ++R I P+ +N T GR N+R +
Sbjct: 121 VGTDAYNMALGQRRAQSVKTYLVSKGVDASR-IYTESKGKSNPVASNATAEGRAKNRRTD 179
Query: 180 IQIF 183
I++
Sbjct: 180 IEVV 183
>gi|330984878|gb|EGH82981.1| OmpA family protein [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 381
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 141 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 200
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 201 TRLAKVVEGDQKTAVLILGHADTSGPTEANQKISQERAQSVAAIFRL-SGLERNRLSQRG 259
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 260 MGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 292
>gi|229515215|ref|ZP_04404675.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae TMA 21]
gi|229347920|gb|EEO12879.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae TMA 21]
Length = 172
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 64/181 (35%), Gaps = 15/181 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ + ++ C + V+ + L+ + +L++
Sbjct: 6 VLKSLLIALPV-LAVTACSSSDDAANSGSQTNQT---AVSTVDSNGLNAQGQLTEQELKE 61
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A L K PS + I+ H D
Sbjct: 62 QALRENQT----------IYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADER 111
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + ++ +S+ + + P+ ++ N+R +
Sbjct: 112 GTPEYNIALGERRAQAVAK-YLEALGVQAGQLSIVSYGEEKPLVLGQSEEAYAKNRRAVL 170
Query: 181 Q 181
Sbjct: 171 V 171
>gi|326424248|ref|NP_762484.2| protein F-like protein [Vibrio vulnificus CMCP6]
gi|319999634|gb|AAO07474.2| Protein F-related protein [Vibrio vulnificus CMCP6]
Length = 198
Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 75/199 (37%), Gaps = 20/199 (10%)
Query: 1 MIKELGLSMFIMTTISGCGL----------ASREKKKVFLHK----SNDTDIVNKRFGSS 46
M K+ S+F +SGC A + +++ +
Sbjct: 1 MKKQ---SLFACVLLSGCANLIVPPNMLDVAPKTNEELVYPEWGGEEVSPPPPQMMQAQK 57
Query: 47 LDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILN 104
D Q LQ I + GD I ++ + F + + L+ LN
Sbjct: 58 PQVQSDSLQSFLQRNAIQYQILPGDHIMIHLTETIHFKTGSAEVSPVSARWIGLLGNYLN 117
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I I H DS GT N +S+ RA+ +K L+ V +R + RG+ P
Sbjct: 118 QRSDVDIVIDGHADSTGTTGFNNSLSERRAEEVKKQLLMSRVPESRVYT-RGYGEYLPAC 176
Query: 165 TNDTKVGRQNNQRIEIQIF 183
+N + GR+ N+R+E+ +
Sbjct: 177 SNTSINGRKCNRRVELMLI 195
>gi|254439458|ref|ZP_05052952.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198254904|gb|EDY79218.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 310
Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 54/119 (45%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ D + V L + LQ +A L P +A+ HTDS+G+L
Sbjct: 190 QSLEDQGRFILTGLVFQTGSAQLGDASVMSLQDLADYLIANPDRTVALVGHTDSVGSLDG 249
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +S+ RA + L+ R + +G Y P+ TN T+ GR+ N+R+E+ I
Sbjct: 250 NIALSKRRAGSVLERLVTTYDIPRRQLDAQGMGYLSPVATNLTEDGREANRRVEVIITS 308
>gi|255654793|ref|ZP_05400202.1| putative chemotaxis protein [Clostridium difficile QCD-23m63]
gi|296449538|ref|ZP_06891315.1| chemotaxis protein MotB [Clostridium difficile NAP08]
gi|296261602|gb|EFH08420.1| chemotaxis protein MotB [Clostridium difficile NAP08]
Length = 246
Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 56/141 (39%), Gaps = 6/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
++ + + + + + + F + ++ + I +LN+
Sbjct: 93 EEIQKYLNENGMANSVSLRVQDRGLVISLKDTILFDTGKAVVKDNSREKIIQIGKMLNEM 152
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
S I ++ HTD++ K+N +S RA + LI + +S G+ P
Sbjct: 153 NSY-IRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDKLSAVGYGEFRP 211
Query: 163 IDTNDTKVGRQNNQRIEIQIF 183
I N ++ GR N+R++I +
Sbjct: 212 IAENSSEEGRSKNRRVDIVLV 232
>gi|113969260|ref|YP_733053.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113883944|gb|ABI37996.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 485
Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 47/108 (43%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + + + P+L+++A+ L + P+ + HTD G N +S+ RA
Sbjct: 373 TLEGLLFDYDSERMLPESKPVLEVLASYLKQNPTLSFYVVGHTDDKGERSYNQSLSERRA 432
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L + ++ G P+ +N G++ N+R+E+ +
Sbjct: 433 AAVIKQLSDGFKIPSAQLTAHGNGEYSPVASNTNDAGQKLNRRVELVL 480
>gi|226943639|ref|YP_002798712.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii
DJ]
gi|226718566|gb|ACO77737.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii
DJ]
Length = 270
Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 3/134 (2%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
++ + + QL + + + + L + +A L
Sbjct: 128 EQQGEWLEEQLLGR--TTTETERGLVMTLGDVLFDTGREELRSAATRTVVQVARFLRLNQ 185
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
V+ I+ +TDS G + NL +S+ RA +K L+ GV + R + V G+ YP+ N
Sbjct: 186 RRVVRIEGYTDSQGDDQLNLELSRGRAQSVKDMLVDLGVDAGR-VQVAGYGEAYPVAENA 244
Query: 168 TKVGRQNNQRIEIQ 181
+ GR N+R+EI
Sbjct: 245 SSQGRARNRRVEIV 258
>gi|238023632|ref|YP_002907864.1| outer membrane protein [Burkholderia glumae BGR1]
gi|237878297|gb|ACR30629.1| Outer membrane protein [Burkholderia glumae BGR1]
Length = 569
Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 49/106 (46%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L++ +P L+ + + + I HTD +G+ + NL +SQ RA I+
Sbjct: 458 SLFDSGRATLKRDAIPKLRNVLGRILANRDQRVLIAGHTDDVGSPEANLKLSQARALAIR 517
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ ++ G +++ + PI N T GR N+R+EI P
Sbjct: 518 DWFVRVGALPVTRFAIQAYGDTRPIADNLTPQGRAMNRRVEILFIP 563
>gi|312129228|ref|YP_003996568.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311905774|gb|ADQ16215.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 705
Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 57/141 (40%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
G + + + I + S+ L ++ L I I
Sbjct: 563 IGQESIAQTAPKTVNAEPESVKDMVIEAGKKIVLREVYFDQSKAELRQESFVELDRIKKI 622
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ + P VI ++ HTD+ G N ++++R +K+YLI+ G I ++ + P
Sbjct: 623 MMEHPDMVILLEGHTDNQGDANLNFKLAEQRILNVKNYLIEDGQIKEERIQLKSWGQYRP 682
Query: 163 IDTNDTKVGRQNNQRIEIQIF 183
+ N T+ R+ N+R+E I
Sbjct: 683 LVKNTTEEERRKNRRVEFTIL 703
>gi|117920971|ref|YP_870163.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117613303|gb|ABK48757.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 178
Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 62/178 (34%), Gaps = 8/178 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + IS C S E + + +N + G + Q
Sbjct: 8 KAMLVALPIMAISACSSTS-ESETDAMGSTNGSGSELNGGGVQTGGIGGMLSPEEQQRQQ 66
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + I ++ +F +L+ T L + PS + I+ H D GT
Sbjct: 67 LEQLRKEHII------YFDFDRSEVQTEFAAVLEAHGTYLVEHPSVRVLIEGHADERGTP 120
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA + +Q +S+ + + P+D T G N+R +
Sbjct: 121 EYNIALGERRAKAVAK-YLQGMGVQPSQMSIVSYGEEKPLDFTRTDEGFAKNRRAVLV 177
>gi|262377497|ref|ZP_06070719.1| outer membrane protein [Acinetobacter lwoffii SH145]
gi|262307553|gb|EEY88694.1| outer membrane protein [Acinetobacter lwoffii SH145]
Length = 352
Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 52/100 (52%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++ ++ ++ P + +A L ++P+ I+ HTD+ G N +S RA+ +K
Sbjct: 236 VFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIEGHTDNTGPRALNERLSLARANSVK 295
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S L+ +S +GFA+ PI N+TK GR N+R+
Sbjct: 296 SSLVNEYNVDASRLSTQGFAWDQPIADNNTKEGRAMNRRV 335
>gi|330500929|ref|YP_004377798.1| hypothetical protein MDS_0015 [Pseudomonas mendocina NK-01]
gi|328915215|gb|AEB56046.1| hypothetical protein MDS_0015 [Pseudomonas mendocina NK-01]
Length = 443
Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 7/164 (4%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEV 86
+ + V K + ++ + V D I +
Sbjct: 280 GEVPVQSIEPAVVKPRVVERPRLATFLADDIRANRVAVEDGVDRSVVTIRGDELFSSGSA 339
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLI 142
+ F P+L IA + K + I H+D+ +N +S+ RA+ + L
Sbjct: 340 SIRDDFQPLLLRIAEAVAKVKG-QVRITGHSDNQPIATLRFPSNWALSRARAEEVLQILA 398
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
R + R S G + P+ +N T GR N+R+EI + G
Sbjct: 399 ARTGQAER-FSAEGLSDTEPLASNATAEGRAKNRRVEITVLAEG 441
>gi|317153907|ref|YP_004121955.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316944158|gb|ADU63209.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 380
Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + P+L + LN + I + HTDS G NL +S+ RA+
Sbjct: 272 DIQFDFDKDTIRPESYPLLDALGEALNTQQLKGRSIIVGGHTDSRGDDAYNLALSKRRAN 331
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+K+YL+ + + I GF PI T + N+R+EI++
Sbjct: 332 AVKAYLVNKWGVAQDLIEAVGFGKTRPIAAGSTTEAMRKNRRVEIRL 378
>gi|149774748|gb|ABR28420.1| OmpA/MotB [Delftia tsuruhatensis]
Length = 219
Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + L +A+ + V+ HTDS+G+ N +S RA+ +
Sbjct: 109 DAFFDFDKSVLKPEGKAKLDDLASKVKGINLEVVIAVGHTDSVGSDAYNQKLSVRRAEAV 168
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + + G K PI N TK GR N+R+EI++
Sbjct: 169 KAYLVSK-GIEKNRVYTEGKGEKQPIADNKTKEGRAKNRRVEIEVV 213
>gi|160900150|ref|YP_001565732.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
gi|151500323|gb|ABS12102.1| OmpA/MotB [Delftia acidovorans]
gi|160365734|gb|ABX37347.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
Length = 219
Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + L +A+ + V+ HTDS+G+ N +S RA+ +
Sbjct: 109 DAFFDFDKSVLKPEGKAKLDDLASKVKGINLEVVIAVGHTDSVGSDAYNQKLSVRRAEAV 168
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + + G K PI N TK GR N+R+EI++
Sbjct: 169 KAYLVSK-GIEKNRVYTEGKGEKQPIADNKTKEGRAKNRRVEIEVV 213
>gi|117919364|ref|YP_868556.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117611696|gb|ABK47150.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 485
Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 46/108 (42%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + + + P+L+++A+ L + P + HTD G N +S+ RA
Sbjct: 373 TLEGLLFDYDSERMLPESKPVLEVLASYLKQNPKLSFYVVGHTDDKGERSYNQSLSERRA 432
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L + ++ G P+ +N G++ N+R+E+ +
Sbjct: 433 AAVIKQLSDGFKIPSAQLTAHGNGEYSPVASNTNDAGQKLNRRVELVL 480
>gi|325953665|ref|YP_004237325.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323436283|gb|ADX66747.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 218
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E + QL D V+ + +++ + L + IA IL +P+
Sbjct: 84 EKKLINQLNDQKFSVNIDKTKDWITLDRVYFDINKSVITDNSLIQIDNIAKILKAYPTAT 143
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTK 169
+ I +TD+ G N IS RAD + L+ + S IS G+ ++ + NDT
Sbjct: 144 LKIGGYTDNTGDAAINKKISTNRADEVAKALVNK-GISANRISTEGYGDQHFLCEANDTD 202
Query: 170 VGRQNNQRIEIQIFPR 185
+ R N+R++I+I +
Sbjct: 203 LCRAQNRRVDIRITKK 218
>gi|262369227|ref|ZP_06062555.1| outer membrane protein A [Acinetobacter johnsonii SH046]
gi|262315295|gb|EEY96334.1| outer membrane protein A [Acinetobacter johnsonii SH046]
Length = 348
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 52/100 (52%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++ ++ ++ P + +A L ++P+ I+ HTD+ G N +S RA+ +K
Sbjct: 236 VFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIEGHTDNTGPRALNERLSLARANSVK 295
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S L+ +S +GFA+ PI N+TK GR N+R+
Sbjct: 296 SSLVNEYNVDPARLSTQGFAWDQPIADNNTKEGRAMNRRV 335
>gi|258513971|ref|YP_003190193.1| OmpA/MotB domain-containing protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257777676|gb|ACV61570.1| OmpA/MotB domain protein [Desulfotomaculum acetoxidans DSM 771]
Length = 275
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 71/194 (36%), Gaps = 15/194 (7%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-- 60
K + ++ + + G + + I ++ ++ + E Q +L D
Sbjct: 45 KFVAMASSLSIALGGSEHILPGAGPSAIESNPSPPIQVQQIQKEAEQLK-ELQKELHDLI 103
Query: 61 ------TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
I+VS + V F L K ++Q + IL K + I I
Sbjct: 104 EKKNLTGHILVSIEERGLVVSFLDPVLFPLGSAQLTPKAKNIVQEVGQILLKSDNY-IRI 162
Query: 114 QSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ HTD I +N +S RA + LI+ ++ G+ P ND+
Sbjct: 163 EGHTDDIPINTAIYPSNWELSAARATSVVQELIKTMSFPPERLAATGYGEYRPRVPNDSM 222
Query: 170 VGRQNNQRIEIQIF 183
+Q N+R++I +
Sbjct: 223 DHKQMNRRVDIVVV 236
>gi|148926911|ref|ZP_01810589.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni CG8486]
gi|145844488|gb|EDK21596.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni CG8486]
gi|284925406|gb|ADC27758.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni IA3902]
Length = 165
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 67/184 (36%), Gaps = 23/184 (12%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L +S+ + ISGC S SN G +D +
Sbjct: 1 MKKILFISIAALAVVISGCSTKSTSVSGDSSVDSNRG--SGGSDGWDIDSKISQLND--- 55
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTD 118
+ + + ++ A I N + I ++ + D
Sbjct: 56 ---------------TLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCD 100
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N + +RA +K LI +GV+++R I+V+ + P+ T TK N+R
Sbjct: 101 EWGTDEYNQALGLKRAKAVKEALIAKGVNADR-IAVKSYGETNPVCTEKTKACDAQNRRA 159
Query: 179 EIQI 182
E ++
Sbjct: 160 EFKL 163
>gi|320158835|ref|YP_004191213.1| protein F-related protein [Vibrio vulnificus MO6-24/O]
gi|319934147|gb|ADV89010.1| protein F-related protein [Vibrio vulnificus MO6-24/O]
Length = 200
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 75/199 (37%), Gaps = 20/199 (10%)
Query: 1 MIKELGLSMFIMTTISGCGL----------ASREKKKVFLHK----SNDTDIVNKRFGSS 46
M K+ S+F +SGC A + +++ +
Sbjct: 3 MKKQ---SLFACVLLSGCANLIVPPNMLDVAPKTNEELVYPEWGGEEVSPPPPQMMQAQK 59
Query: 47 LDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILN 104
D Q LQ I + GD I ++ + F + + L+ LN
Sbjct: 60 PQVQSDSLQSFLQRNAIQYQILPGDHIMIHLTETIHFKTGSAEVSPVSARWIGLLGNYLN 119
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I I H DS GT N +S+ RA+ +K L+ V +R + RG+ P
Sbjct: 120 QRSDVDIVIDGHADSTGTTGFNNSLSERRAEEVKKQLLMSRVPESRVYT-RGYGEYLPAC 178
Query: 165 TNDTKVGRQNNQRIEIQIF 183
+N + GR+ N+R+E+ +
Sbjct: 179 SNTSINGRKCNRRVELMLI 197
>gi|302558689|ref|ZP_07311031.1| secreted protein [Streptomyces griseoflavus Tu4000]
gi|302476307|gb|EFL39400.1| secreted protein [Streptomyces griseoflavus Tu4000]
Length = 215
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 79/198 (39%), Gaps = 20/198 (10%)
Query: 4 ELGLSMFIMTTISGC-------GLASREKKKVFLHKSNDTDIVNKR---------FGSSL 47
L L + T + A +++ + V G++L
Sbjct: 12 RLALVLSAATVMVAANLYGAVVAHADDGPGVPPGTEASASAPVEVDPNDPDLKLPEGATL 71
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDM---ITCYIPVHVSF-VSEVFLEKKFLPMLQLIATIL 103
+ + Q+ + R D +T + V F L + + IA +
Sbjct: 72 TEPKVLDIKQIVEDKSGDERREDTNSDVTFALQAEVLFGKDSAKLGAEAKARIATIAGEI 131
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+T + + TD++G+ + ++S++RA+ +++ L + +N VRG+ +YPI
Sbjct: 132 KTQNATKVRVFGFTDNLGSSAHGDVLSRQRANAVQAVLGRELSDANITYEVRGYGEQYPI 191
Query: 164 DTNDTKVGRQNNQRIEIQ 181
N T+ GR+ N+R+EI
Sbjct: 192 ADNSTEAGRKKNRRVEIT 209
>gi|296113686|ref|YP_003627624.1| OmpA family protein [Moraxella catarrhalis RH4]
gi|295921380|gb|ADG61731.1| OmpA family protein [Moraxella catarrhalis RH4]
Length = 551
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 11/179 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ K+ N ++ + + +GD +
Sbjct: 356 ATTPEDVAKLVEGAKNILPADFTVEAEPELDINTAVADSIETARVAIVALGDTVEENEMD 415
Query: 79 HV----------SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + + ++ +L L A L P T + I HTD+ GT + N
Sbjct: 416 ILINALNTQIINFALDSTEIPQENKEILDLAAEKLKAVPETTLRIIGHTDTQGTHEYNQD 475
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S+ RA +K YL+ +GV++ R ++ +G ++ YP+ +N T+ GR N+RIE +F G
Sbjct: 476 LSESRAAAVKEYLVSKGVAAER-LNTQGASFDYPVASNATEQGRFQNRRIEFVLFQEGE 533
>gi|167744038|ref|ZP_02416812.1| hypothetical protein Bpse14_38553 [Burkholderia pseudomallei 14]
Length = 379
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V D + F + +++P+L +A LN+
Sbjct: 227 RVAKFLEPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNQVQ 286
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +TD +N +S+ERA + LI + I+ G P+
Sbjct: 287 G-NVRVSGYTDDTPVHTARFASNWDLSRERAQAV-RSLIAARLDRPERITAEGRGTLDPV 344
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
ND+ R N+R+EI +
Sbjct: 345 APNDSPANRARNRRVEITLM 364
>gi|222823421|ref|YP_002574995.1| outer membrane fibronectin-binding protein [Campylobacter lari
RM2100]
gi|222538643|gb|ACM63744.1| outer membrane fibronectin-binding protein [Campylobacter lari
RM2100]
gi|244538678|dbj|BAH82830.1| fibronectin-binding protein [Campylobacter lari]
gi|244538683|dbj|BAH82834.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
K + I K +DK+ E + G ++ IG T + H F
Sbjct: 174 NKTPKAPQLATNQIEEKPQAKQIDKSCPEPRK-----GALLDHIGCEKTIMLEGHFGF-D 227
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
++ + +F +Q + +L + P ++ HTD+ G N +S ERA + +++
Sbjct: 228 QITINPEFAQKIQEVGKVLEENPQYYTILEGHTDNTGPKAYNQKLSLERAKAVAKE-LEK 286
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ I+ +G+ ++ PI +NDTK GR N+R+E
Sbjct: 287 AGVAKEKITTKGYGFEKPIASNDTKEGRAQNRRVE 321
>gi|255321985|ref|ZP_05363135.1| OmpA family protein [Campylobacter showae RM3277]
gi|255301089|gb|EET80356.1| OmpA family protein [Campylobacter showae RM3277]
Length = 192
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 71/187 (37%), Gaps = 19/187 (10%)
Query: 2 IKELGL--SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K++ L + +SGC + E N + + S + + ++
Sbjct: 21 MKKVVLTSAAIAALLLSGCSSKNPEVDMSADANQNMGGMNSSDNMMSDSERLQQLISSIE 80
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHT 117
V + ++ + A + N+ + + ++ +
Sbjct: 81 GQVQTV--------------YFDFDKFNIKGDMQSAINTNAGLFNQSEAQALSVKVEGNC 126
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + N + +RA K L+++GV+++R I+V + P+ T+ TK N+R
Sbjct: 127 DEWGTDEYNYALGLKRAKAAKDALVKQGVAADR-ITVVSYGESNPVCTDKTKACDAQNRR 185
Query: 178 IEIQIFP 184
E ++ P
Sbjct: 186 AEFKVLP 192
>gi|189500991|ref|YP_001960461.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
BS1]
gi|189496432|gb|ACE04980.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides BS1]
Length = 350
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 68/162 (41%), Gaps = 3/162 (1%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A + ++K+ + +++ + M + + I +
Sbjct: 190 TAVEWNRDDAVYKAEKGAYIAVDI---IEEQAMKKNMVVVKADAMKKAIASSGRIALYGI 246
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ ++ P++ IA +L + PS V+ + HTD+ G N+ +S++RA + S
Sbjct: 247 FFDSGKAVIKPASKPVIAEIAKLLKQDPSLVLHVVGHTDNAGGYTFNMGLSRKRALAVVS 306
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L ++ ++ + G Y P+ TN + GR N+R+E+
Sbjct: 307 ALARQHNIASSRLIANGVGYLAPVATNTSAAGRAKNRRVELV 348
>gi|124010248|ref|ZP_01694902.1| chemotaxis protein MotB [Microscilla marina ATCC 23134]
gi|123983684|gb|EAY24121.1| chemotaxis protein MotB [Microscilla marina ATCC 23134]
Length = 286
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V+ I + + F +++K L +A +LNK I I+ HTDS
Sbjct: 146 DELTVTSKNGKIYVSLAEKLLFKSGRTDVDRKGKKALGKLAEVLNKNQDIDIQIEGHTDS 205
Query: 120 IG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
I ++N +S RA I L++ + ++ G P+ +N K GR N
Sbjct: 206 IPITTARFRDNWDLSVLRATSIVRILVKDYEVDPKTLTPAGRGETTPVASNKNKEGRAKN 265
Query: 176 QRIEIQIFPR 185
+RIEI + P+
Sbjct: 266 RRIEIVLSPK 275
>gi|15803127|ref|NP_289158.1| putative outer membrane lipoprotein [Escherichia coli O157:H7
EDL933]
gi|15832722|ref|NP_311495.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. Sakai]
gi|168752055|ref|ZP_02777077.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113]
gi|168762397|ref|ZP_02787404.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501]
gi|168773468|ref|ZP_02798475.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196]
gi|168778583|ref|ZP_02803590.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076]
gi|195940199|ref|ZP_03085581.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
EC4024]
gi|208807469|ref|ZP_03249806.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206]
gi|208813697|ref|ZP_03255026.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045]
gi|208820246|ref|ZP_03260566.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042]
gi|209399323|ref|YP_002272076.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115]
gi|217327416|ref|ZP_03443499.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588]
gi|254794551|ref|YP_003079388.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
TW14359]
gi|12517027|gb|AAG57716.1|AE005490_11 putative outer membrane protein [Escherichia coli O157:H7 str.
EDL933]
gi|13362939|dbj|BAB36891.1| putative outer membrane protein [Escherichia coli O157:H7 str.
Sakai]
gi|187770670|gb|EDU34514.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196]
gi|188014012|gb|EDU52134.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113]
gi|189003592|gb|EDU72578.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076]
gi|189367264|gb|EDU85680.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501]
gi|208727270|gb|EDZ76871.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206]
gi|208734974|gb|EDZ83661.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045]
gi|208740369|gb|EDZ88051.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042]
gi|209160723|gb|ACI38156.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115]
gi|209762580|gb|ACI79602.1| putative outer membrane protein [Escherichia coli]
gi|209762582|gb|ACI79603.1| putative outer membrane protein [Escherichia coli]
gi|209762586|gb|ACI79605.1| putative outer membrane protein [Escherichia coli]
gi|217319783|gb|EEC28208.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588]
gi|254593951|gb|ACT73312.1| predicted outer membrane lipoprotein [Escherichia coli O157:H7 str.
TW14359]
gi|320188940|gb|EFW63599.1| Integral membrane protein YfiB [Escherichia coli O157:H7 str.
EC1212]
gi|326344357|gb|EGD68115.1| Integral membrane protein YfiB [Escherichia coli O157:H7 str. 1125]
gi|326347726|gb|EGD71443.1| Integral membrane protein YfiB [Escherichia coli O157:H7 str. 1044]
Length = 160
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 64/185 (34%), Gaps = 27/185 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIFP 184
+ I P
Sbjct: 155 VVITP 159
>gi|121998997|ref|YP_001003784.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1]
gi|121590402|gb|ABM62982.1| OmpA/MotB domain protein [Halorhodospira halophila SL1]
Length = 208
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 8/169 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV- 78
E+ + ++ D D D AE+E + + G+ D P
Sbjct: 38 AVPGEEAEDAEIETEDFDPTEAEALEDPDDAEEERLERARAEGLDPDDPLDAAVLDEPES 97
Query: 79 ------HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ +P+L+ A L + P + I+ HTD G+ + NL + +
Sbjct: 98 PLATRRVHFAFDSSNIRDDDIPVLEAHAEFLREHPDERMTIEGHTDERGSREYNLALGER 157
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA+ ++ L + + + V + + P+ + N+R E+
Sbjct: 158 RAEAVERLLRAN-GARSDQLEVVSYGEEDPLVDESNEDAWAENRRAELL 205
>gi|255037616|ref|YP_003088237.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254950372|gb|ACT95072.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 412
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T +P S+ L + L + +++ P+ I ++ HTD++G NL +S++
Sbjct: 302 TILLPNIYFETSKYTLLPESYEELNRLVDVMSDSPTVKIRVEGHTDNVGDFDKNLELSRQ 361
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ +K+YL+++ I +G+ PI ++ R+ N+R+E I
Sbjct: 362 RAESVKNYLVEK-GIEGSRIEAKGYGGTRPITKG-SEEERKKNRRVEFVIT 410
>gi|332886090|gb|EGK06334.1| hypothetical protein HMPREF9456_00208 [Dysgonomonas mossii DSM
22836]
Length = 295
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 7/138 (5%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ ++QD I V + ++ + + + + K +L IA I+ + + +
Sbjct: 143 RDEMQDLDIKV--LKGVVYISLDDRMLYRSGGYEISTKAGEILSKIAKIIMDYKDYSVLV 200
Query: 114 QSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ +TD S ++NN +S RA + L + ++ G PI TN T
Sbjct: 201 EGNTDTDPISRPNIRNNWDLSALRASSVVQALQNNYGVDPKRLTAAGRGEYNPIATNSTA 260
Query: 170 VGRQNNQRIEIQIFPRGN 187
G+ N+R +I I P N
Sbjct: 261 EGKALNRRTQIIITPELN 278
>gi|330503720|ref|YP_004380589.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328918006|gb|AEB58837.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 262
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
E ++ L + ++ ++ R + + +Q Q G+ + + +
Sbjct: 98 EDQRRQLGEQRESARLDSRTREADQAQQRNVDLQRQIDGLNAEETERGLLVTLGDLLFAS 157
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L L + LN+ P + I+ HTD++G+ N +SQ RAD +KS+L
Sbjct: 158 GRAELNGNANHNLATLTDFLNRHPERTVTIEGHTDNVGSESANFGLSQRRADSVKSHLQS 217
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+G++++R + G P+ ND+ GRQ N+R+EI I
Sbjct: 218 QGIAASRLL-ASGMGEGSPVAGNDSAEGRQLNRRVEIII 255
>gi|326563201|gb|EGE13469.1| OmpA family protein [Moraxella catarrhalis 12P80B1]
Length = 551
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 11/179 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ K+ N ++ + + +GD +
Sbjct: 356 ATTPEDVAKLVEGAKNILPADFTVEAEPELDINTAVADSIETARVAIVALGDTVEENEMD 415
Query: 79 HV----------SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + + ++ +L L A L P T + I HTD+ GT + N
Sbjct: 416 ILINALNTQIINFALDSTEIPQENKEILDLAAEKLKAVPETTLRIIGHTDTQGTHEYNQD 475
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S+ RA +K YL+ +GV++ R ++ +G ++ YP+ +N T+ GR N+RIE +F G
Sbjct: 476 LSESRAAAVKEYLLSKGVAAER-LNTQGASFDYPVASNATEQGRFQNRRIEFVLFQEGE 533
>gi|313887354|ref|ZP_07821045.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
gi|332299263|ref|YP_004441184.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
gi|312923273|gb|EFR34091.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
gi|332176326|gb|AEE12016.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
Length = 225
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 43 FGSSLDKAEDEFQMQL-QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF-LPMLQLIA 100
G ++K + E + QL T + G I + F + L+ A
Sbjct: 69 IGHRMEKQKKELEQQLPAGTQVETVNEGQAIKVVFDSGLLFNTSSSTLSSSSRNDLRKFA 128
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
LNK TV+ I HTDS G + N +S RA ++ ++ S+ + G
Sbjct: 129 DNLNKNDDTVLEIIGHTDSSGNDRINDPLSLNRAKSVRD-FLEGQGVSSVRMKYEGRGSH 187
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
P+DTN T G++ N+R+E+ I P +
Sbjct: 188 EPVDTNATAEGKRKNRRVEVFILPSQKM 215
>gi|298488773|ref|ZP_07006801.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298156691|gb|EFH97783.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 376
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 141 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 200
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 201 TRLAKVVEGDQKTAVLILGHADTSGPTEANQKISQERAQSVAAIFRL-SGLERNRLSQRG 259
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 260 MGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 292
>gi|167002401|ref|ZP_02268191.1| ompA family protein [Burkholderia mallei PRL-20]
gi|243061889|gb|EES44075.1| ompA family protein [Burkholderia mallei PRL-20]
Length = 438
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V D + F + +++P+L +A LN+
Sbjct: 286 RVAKFLEPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNQVQ 345
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +TD +N +S+ERA + LI + I+ G P+
Sbjct: 346 G-NVRVSGYTDDTPVHTARFASNWDLSRERAQAV-RSLIAARLDRPERITAEGRGTLDPV 403
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
ND+ R N+R+EI +
Sbjct: 404 APNDSPANRARNRRVEITLM 423
>gi|94970145|ref|YP_592193.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
versatilis Ellin345]
gi|94552195|gb|ABF42119.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
versatilis Ellin345]
Length = 242
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 59/165 (35%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + ++ + + + +K + Q+ V + +
Sbjct: 59 AQSGIADAQAKATTADQHAVQAGQQADAANKNATQVNGQVASLAGTVENLDNYKPVAESS 118
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L KK L + + +I ++ TDS G N +S+ RAD +
Sbjct: 119 VHFGFDKADLTKKAKDALDQLGGQFSSTKHFIIEVEGSTDSTGDADYNYQLSKRRADAVI 178
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
YL + I + G P++ N T GR N+R+++++
Sbjct: 179 QYLADKYQIPAHKIYLIGLGKDKPVEKNATSEGRAKNRRVDVRLM 223
>gi|331010144|gb|EGH90200.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 381
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 141 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 200
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 201 TRLAKVVEGDQKTAVLILGHADTSGPTEANQKISQERAQSVAAIFRL-SGLERNRLSQRG 259
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 260 MGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 292
>gi|326563483|gb|EGE13746.1| OmpA family protein [Moraxella catarrhalis 103P14B1]
gi|326572976|gb|EGE22955.1| OmpA family protein [Moraxella catarrhalis CO72]
gi|326573791|gb|EGE23748.1| OmpA family protein [Moraxella catarrhalis 101P30B1]
Length = 551
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 11/179 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI------ 72
+ K+ N ++ + + +GD +
Sbjct: 356 ATTPEDVAKLVEGAKNILPADFTVEAEPELDINTAVADSIETARVAIVALGDTVEENEMD 415
Query: 73 ----TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + + ++ +L L A L P T + I HTD+ GT + N
Sbjct: 416 ILINALNTQIINFALDSTEIPQENKEILDLAAEKLKAVPETTLRIIGHTDTQGTHEYNQD 475
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S+ RA +K YL+ +GV++ R ++ +G ++ YP+ +N T+ GR N+RIE +F G
Sbjct: 476 LSESRAAAVKEYLVSKGVAAER-LNTQGASFDYPVASNATEQGRFQNRRIEFVLFQEGE 533
>gi|326562428|gb|EGE12747.1| OmpA family protein [Moraxella catarrhalis 7169]
gi|326562797|gb|EGE13092.1| OmpA family protein [Moraxella catarrhalis 46P47B1]
gi|326569136|gb|EGE19198.1| OmpA family protein [Moraxella catarrhalis BC1]
gi|326570622|gb|EGE20658.1| OmpA family protein [Moraxella catarrhalis BC7]
gi|326574786|gb|EGE24720.1| OmpA family protein [Moraxella catarrhalis O35E]
Length = 551
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 11/179 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI------ 72
+ K+ N ++ + + +GD +
Sbjct: 356 ATTPEDVAKLVEGAKNILPADFTVEAEPELDINTAVADSIETARVAIVALGDTVEENEMD 415
Query: 73 ----TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + + ++ +L L A L P T + I HTD+ GT + N
Sbjct: 416 ILINALNTQIINFALDSTEIPQENKEILDLAAEKLKAVPETTLRIIGHTDTQGTHEYNQD 475
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S+ RA +K YL+ +GV++ R ++ +G ++ YP+ +N T+ GR N+RIE +F G
Sbjct: 476 LSESRAAAVKEYLVSKGVAAER-LNTQGASFDYPVASNATEQGRFQNRRIEFVLFQEGE 533
>gi|261341331|ref|ZP_05969189.1| peptidoglycan-associated lipoprotein [Enterobacter cancerogenus
ATCC 35316]
gi|296103328|ref|YP_003613474.1| peptidoglycan-associated outer membrane lipoprotein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|288316636|gb|EFC55574.1| peptidoglycan-associated lipoprotein [Enterobacter cancerogenus
ATCC 35316]
gi|295057787|gb|ADF62525.1| peptidoglycan-associated outer membrane lipoprotein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 173
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C G+ + Q
Sbjct: 6 VLKGLMIALPVM-AIAACSSNKNASNDQSGEGMMGAGTGMDANGN------GNMSSEEQA 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + I + + + F ML A L PS + ++ H D
Sbjct: 59 RLQMQQLQQNNIV------YFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 113 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 171
Query: 181 Q 181
Sbjct: 172 V 172
>gi|194469803|ref|ZP_03075787.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|197251258|ref|YP_002145710.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|205358387|ref|ZP_02655691.2| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|238911682|ref|ZP_04655519.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|194456167|gb|EDX45006.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|197214961|gb|ACH52358.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|205334829|gb|EDZ21593.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 174
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 65/181 (35%), Gaps = 13/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C K S + G + + + +
Sbjct: 6 VLKGLMIALPVM-AIAACSS----NKNASNDGSEGGMLNGAGTGMDSNGSGNMSSEEQAR 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + +++ + + + F ML A L PS + ++ H D
Sbjct: 61 LQMQQLQQNNIV-------YFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 113
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 114 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 172
Query: 181 Q 181
Sbjct: 173 V 173
>gi|330878862|gb|EGH13011.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 320
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 80 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 139
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 140 TRLAKVVEGDQKTAVLILGHADTSGPTEGNQKISQERAQSVAAIFRL-SGLERNRLSQRG 198
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 199 MGAVMPRAANDSLEGRALNRRVEILMTPQDTMR 231
>gi|298209046|ref|YP_003717225.1| putative flagellar motor protein MotB [Croceibacter atlanticus
HTCC2559]
gi|83848973|gb|EAP86842.1| putative flagellar motor protein MotB [Croceibacter atlanticus
HTCC2559]
Length = 286
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ D I ++ ++ I + F + + +L +AT++N P ++ H
Sbjct: 136 MADEDIEINVEKGVVYVSISDKLLFKSGSYNVTSRAKEVLGKVATVVNAKPDIEFMVEGH 195
Query: 117 TDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD++ ++N +S +RA + L + ++ G +Y P+ +NDT GR
Sbjct: 196 TDNVPIKNAVLEDNWDLSAKRATSVVRILQDEYGVPPQRMTAAGRSYYIPVASNDTAEGR 255
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 256 AKNRRTRIVVLPK 268
>gi|302187242|ref|ZP_07263915.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
Length = 386
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 199
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 200 TRLAKVVEGDQKTAVLILGHADTSGPTEANQKISQERAQSVAAIFRL-SGLERNRLSQRG 258
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 259 MGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 291
>gi|167916344|ref|ZP_02503435.1| hypothetical protein Bpse112_38087 [Burkholderia pseudomallei 112]
Length = 421
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V D + F + +++P+L +A LN+
Sbjct: 269 RVAKFLEPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNQVQ 328
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +TD +N +S+ERA + LI + I+ G P+
Sbjct: 329 G-NVRVSGYTDDTPVHTARFASNWDLSRERAQAV-RSLIAARLDRPERITAEGRGTLDPV 386
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
ND+ R N+R+EI +
Sbjct: 387 APNDSPANRARNRRVEITLM 406
>gi|126740854|ref|ZP_01756539.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
gi|126718150|gb|EBA14867.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
Length = 308
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 68/158 (43%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+ ++ S ++A+ + + + S++ + V V
Sbjct: 149 EDQPPETEPAASSPNLSEVSDEEAKPDSGDHQSEALSLSSQLLAEGHVILEGLVFKSGSV 208
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
L ++ + L+ +A L P + I HTDS+G+L +N +S+ RA+ ++ LI+
Sbjct: 209 RLGQRAVQSLEELAQFLKDHPEARVLIVGHTDSVGSLASNRSLSERRAEAVRGALIENSG 268
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N + G Y PI +N + GR+ N+R+E +
Sbjct: 269 IDNARVQATGVGYAAPIASNLSPAGREKNRRVEAVLLS 306
>gi|167725111|ref|ZP_02408347.1| hypothetical protein BpseD_39196 [Burkholderia pseudomallei DM98]
Length = 407
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V D + F + +++P+L +A LN+
Sbjct: 255 RVAKFLEPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNQVQ 314
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +TD +N +S+ERA + LI + I+ G P+
Sbjct: 315 G-NVRVSGYTDDTPVHTARFASNWDLSRERAQAV-RSLIAARLDRPERITAEGRGTLDPV 372
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
ND+ R N+R+EI +
Sbjct: 373 APNDSPANRARNRRVEITLM 392
>gi|241764514|ref|ZP_04762534.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
gi|241366050|gb|EER60654.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
Length = 212
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + L + + + VI HTDS+GT N +S R++ +
Sbjct: 102 DAFFDFDKSVLKPEGKAKLDDLVSKVKDINLEVIIAVGHTDSVGTDAYNQKLSVRRSEAV 161
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + + G K P+ N TK GR N+R+EI++
Sbjct: 162 KAYLVSK-GIEKNRVYTEGKGEKQPVADNKTKEGRAKNRRVEIEVV 206
>gi|15641837|ref|NP_231469.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121585809|ref|ZP_01675603.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 2740-80]
gi|121727622|ref|ZP_01680725.1| peptidoglycan-associated lipoprotein [Vibrio cholerae V52]
gi|147673661|ref|YP_001217371.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O395]
gi|153214301|ref|ZP_01949318.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 1587]
gi|153800452|ref|ZP_01955038.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-3]
gi|153819810|ref|ZP_01972477.1| peptidoglycan-associated lipoprotein [Vibrio cholerae NCTC 8457]
gi|153824298|ref|ZP_01976965.1| peptidoglycan-associated lipoprotein [Vibrio cholerae B33]
gi|153826235|ref|ZP_01978902.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-2]
gi|153828567|ref|ZP_01981234.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 623-39]
gi|227081964|ref|YP_002810515.1| peptidoglycan-associated lipoprotein [Vibrio cholerae M66-2]
gi|229508068|ref|ZP_04397573.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae BX 330286]
gi|229511693|ref|ZP_04401172.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae B33]
gi|229518832|ref|ZP_04408275.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae RC9]
gi|229520296|ref|ZP_04409722.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae TM 11079-80]
gi|229529142|ref|ZP_04418532.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae 12129(1)]
gi|229607629|ref|YP_002878277.1| OmpA precursor [Vibrio cholerae MJ-1236]
gi|254285225|ref|ZP_04960190.1| peptidoglycan-associated lipoprotein [Vibrio cholerae AM-19226]
gi|254848921|ref|ZP_05238271.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MO10]
gi|255745403|ref|ZP_05419352.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholera
CIRS 101]
gi|262169824|ref|ZP_06037515.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae RC27]
gi|297579354|ref|ZP_06941282.1| peptidoglycan-associated lipoprotein [Vibrio cholerae RC385]
gi|298498126|ref|ZP_07007933.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MAK 757]
gi|9656362|gb|AAF94983.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121549947|gb|EAX59965.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 2740-80]
gi|121630009|gb|EAX62416.1| peptidoglycan-associated lipoprotein [Vibrio cholerae V52]
gi|124115449|gb|EAY34269.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 1587]
gi|124124078|gb|EAY42821.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-3]
gi|126509649|gb|EAZ72243.1| peptidoglycan-associated lipoprotein [Vibrio cholerae NCTC 8457]
gi|126518179|gb|EAZ75404.1| peptidoglycan-associated lipoprotein [Vibrio cholerae B33]
gi|146315544|gb|ABQ20083.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O395]
gi|148875962|gb|EDL74097.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 623-39]
gi|149740000|gb|EDM54175.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-2]
gi|150424497|gb|EDN16433.1| peptidoglycan-associated lipoprotein [Vibrio cholerae AM-19226]
gi|227009852|gb|ACP06064.1| peptidoglycan-associated lipoprotein [Vibrio cholerae M66-2]
gi|227013734|gb|ACP09944.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O395]
gi|229332916|gb|EEN98402.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae 12129(1)]
gi|229342662|gb|EEO07654.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae TM 11079-80]
gi|229343521|gb|EEO08496.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae RC9]
gi|229351658|gb|EEO16599.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae B33]
gi|229355573|gb|EEO20494.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae BX 330286]
gi|229370284|gb|ACQ60707.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae MJ-1236]
gi|254844626|gb|EET23040.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MO10]
gi|255737233|gb|EET92629.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholera
CIRS 101]
gi|262022058|gb|EEY40768.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae RC27]
gi|297536948|gb|EFH75781.1| peptidoglycan-associated lipoprotein [Vibrio cholerae RC385]
gi|297542459|gb|EFH78509.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MAK 757]
gi|327484390|gb|AEA78797.1| 18K peptidoglycan-associated outer membrane lipoprotein;
Peptidoglycan-associated lipoprotein precursor; Outer
membrane protein P6; OmpA/MotB precursor [Vibrio
cholerae LMA3894-4]
Length = 172
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 64/181 (35%), Gaps = 15/181 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ + ++ C + V+ + L+ + +L++
Sbjct: 6 VLKSLLIALPV-LAVTACSSSDDAANSGSQTNQ---SAVSTVDSNGLNAQGQLTEQELKE 61
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A L K PS + I+ H D
Sbjct: 62 QALRENQT----------IYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADER 111
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + ++ +S+ + + P+ ++ N+R +
Sbjct: 112 GTPEYNIALGERRAQAVAK-YLEALGVQAGQLSIVSYGEEKPLVLGQSEEAYAKNRRAVL 170
Query: 181 Q 181
Sbjct: 171 V 171
>gi|237721048|ref|ZP_04551529.1| outer membrane protein [Bacteroides sp. 2_2_4]
gi|293372983|ref|ZP_06619352.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
gi|229449883|gb|EEO55674.1| outer membrane protein [Bacteroides sp. 2_2_4]
gi|292632051|gb|EFF50660.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
gi|295084441|emb|CBK65964.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Bacteroides xylanisolvens XB1A]
Length = 238
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 14/190 (7%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI- 72
+ G + + G +DKA E + ++ + + +
Sbjct: 43 ILGGVIGKGKGAAIGAAIGTAVGAGTGALIGKKMDKAAAEAKQ-IEGAQVEQITDNNGLQ 101
Query: 73 --TCYIPVHVSFV-SEVFLEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL----- 123
+ F L L A LN+ ++I +TD+ G
Sbjct: 102 AVKVTFDSGILFTTGNANLSAAAKSALSKFANNVLNQNRDMDVSIYGYTDNQGWKNSTAA 161
Query: 124 ---KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL +SQERA + SYL+ GVS+N+ SV+G P+ +NDT GR+ N+R+E+
Sbjct: 162 QSQQKNLNLSQERAQSVSSYLLSCGVSTNQIKSVQGMGESDPVASNDTAAGREQNRRVEV 221
Query: 181 QIFPRGNIKK 190
++ + K
Sbjct: 222 YMYASEQMIK 231
>gi|26990890|ref|NP_746315.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|148546893|ref|YP_001266995.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|24985904|gb|AAN69779.1|AE016614_5 OmpA family protein [Pseudomonas putida KT2440]
gi|148510951|gb|ABQ77811.1| OmpA/MotB domain protein [Pseudomonas putida F1]
gi|313497955|gb|ADR59321.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 270
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + + + L+ + + L P V+ I+ +TDS G +
Sbjct: 144 EQADRGLVMTLGDVLFDTGSADLKNSASRTVLKLVQFLQLNPRRVVRIEGYTDSTGAGEE 203
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL +S++RA + L+ + + V G+ +YPI+ N ++ GR N+R+EI
Sbjct: 204 NLKLSRDRAQSVADMLVDL-GIDEKRLQVEGYGDQYPIEANASERGRAQNRRVEIV 258
>gi|329928770|ref|ZP_08282619.1| putative chemotaxis protein MotB [Paenibacillus sp. HGF5]
gi|328937551|gb|EGG33969.1| putative chemotaxis protein MotB [Paenibacillus sp. HGF5]
Length = 271
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 70/195 (35%), Gaps = 25/195 (12%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-------------- 60
I+G K +++ L + E F+ Q ++
Sbjct: 75 ITGTADTENHKNPPPKPAADEEGEDKDTGQEPLTERELAFRAQEEELANFMGLIQQYVKD 134
Query: 61 ----TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
I +S I + F + L+ P+L +A++ +T ++I+
Sbjct: 135 NQLEEDIFISDEPQGIAITLSDRFLFDVGKAELKPGAAPVLGKLASLFGDL-NTTVSIEG 193
Query: 116 HTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
HTD++ K+N +S RA + + ++ G+A P N T
Sbjct: 194 HTDNVPIGRYSSYKDNWELSGARAMSVLRFFLEHSKLDPGGFQYAGYADTRPAADNATAE 253
Query: 171 GRQNNQRIEIQIFPR 185
G+Q N+R+EI + +
Sbjct: 254 GKQKNRRVEITVLRQ 268
>gi|297181726|gb|ADI17907.1| flagellar motor protein [uncultured Desulfobacterales bacterium
HF0200_07G10]
Length = 524
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 72/197 (36%), Gaps = 20/197 (10%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE------------- 51
+ L M + + + K + + I ++++ E
Sbjct: 325 VTLVMVFFILMYAIASKNVQTFKSAIIGAEAKSIGVLEALNAVEVQERLENLEMTKSDDI 384
Query: 52 -DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPST 109
E ++ + V + +P F + L+ P+L + +NK+P
Sbjct: 385 MSEISGMAEEADLDVDTSKSKVIVRVPGASLFKPAQATLQLSARPVLDAVINTVNKYPDY 444
Query: 110 VIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
I +Q HTD N +S RA + Y I +G R + G+A +P+ +
Sbjct: 445 KIHVQGHTDDDPISTAMFPTNWELSAARATAVLRYFIDKGADPERM-TATGYADIFPLVS 503
Query: 166 NDTKVGRQNNQRIEIQI 182
N+T GR N+R+E +
Sbjct: 504 NETPYGRAKNRRVEFVL 520
>gi|262041199|ref|ZP_06014411.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041428|gb|EEW42487.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 174
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 19/184 (10%)
Query: 1 MIKELGLSMFIMTTISGCGL---ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
++K L +++ +M I+ C AS ++ + + N G+ +
Sbjct: 6 VLKGLMIALPVM-AIAACSSNKNASNDQSGEVMLGAGTGMDANGNGGN--------MSSE 56
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
Q + + I + + + F ML A L PS + ++ H
Sbjct: 57 EQARLQMQQLQQNNIV------YFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHA 110
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + N+ + + RA+ + +Q S IS+ + + P + N+R
Sbjct: 111 DERGTPEYNIALGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRR 169
Query: 178 IEIQ 181
+
Sbjct: 170 AVLV 173
>gi|253990432|ref|YP_003041788.1| peptidoglycan-associated outer membrane lipoprotein [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253781882|emb|CAQ85046.1| peptidoglycan-associated lipoprotein [Photorhabdus asymbiotica]
Length = 175
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 56/177 (31%), Gaps = 21/177 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ +M ++ C + + + E Q
Sbjct: 15 VLKGLMLALPVM-AVAACSSNKNADNDQTGVGTVNETNAGLSAEELARQQMQELQNN--- 70
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + F +L A L PS + ++ H D
Sbjct: 71 ----------------NIVYFGFDKYDISSDFSQLLDAHAAFLRSNPSYKVVVEGHADER 114
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + + RA+ + +Q S IS+ + + P + N+R
Sbjct: 115 GTPEYNIALGERRANAV-KMYLQGKGVSGEQISIVSYGKEKPAVLGHDEAAYAKNRR 170
>gi|118443271|ref|YP_877986.1| chemotaxis motB protein [Clostridium novyi NT]
gi|118133727|gb|ABK60771.1| chemotaxis motB protein [Clostridium novyi NT]
Length = 241
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 61/170 (35%), Gaps = 6/170 (3%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV- 83
+ + V K +D D+ + V + I + ++ F
Sbjct: 73 EAPIVGPPEEMGSKVANDNEEMYSKVKDFTSKNNLDSTVQVKKDARGIILELKENILFDS 132
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKS 139
+ L+ +L I+ ++ P+ I I+ HTD++ +N +S +RA +
Sbjct: 133 GQADLKLSSKEILDKISALIESVPNG-IIIEGHTDNVPIHNSKYDSNWELSTQRAVNVLK 191
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
Y + G+ +PI ND V R N+R+ I I K
Sbjct: 192 YFVVSKGEKPEKFQAAGYGEYHPIAKNDNYVDRAKNRRVNILIVGEKEKK 241
>gi|319762553|ref|YP_004126490.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
gi|317117114|gb|ADU99602.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
Length = 240
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + L + + + VI HTDSIGT N +S RA+ +
Sbjct: 131 DAFFDFDKSVLKPEGKAKLDDLVSKVKGINLEVIIAVGHTDSIGTDAYNQKLSVRRAEAV 190
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + + G K PI N TK GR N+R+EI++
Sbjct: 191 KAYLVSK-GIEKNRVYTEGKGEKQPIADNKTKEGRAKNRRVEIEVV 235
>gi|189218838|ref|YP_001939479.1| Outer membrane protein or related peptidoglycan-associated
(lipo)protein [Methylacidiphilum infernorum V4]
gi|189185696|gb|ACD82881.1| Outer membrane protein or related peptidoglycan-associated
(lipo)protein [Methylacidiphilum infernorum V4]
Length = 342
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 3/157 (1%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEV 86
T G + +D R+ + +P + F
Sbjct: 181 ASAPGQAGTHPTGTSGGEGIPGVDDIQTQFKAAANFDP-RVPQPVVLRLPSDILFDFDSA 239
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
++ P+L + IL K+ + I HTD+ G NL +S++RA ++ +L
Sbjct: 240 TIKPNAEPLLFQVLEILKKYNRADVEIGGHTDTFGDEMYNLQLSEQRAFAVQQWLEAHLP 299
Query: 147 SSNRFISVRGFAYKYPID-TNDTKVGRQNNQRIEIQI 182
G+ +PI + + N+R+EI I
Sbjct: 300 QGMYNFHATGYGKSHPIVNPRGSIEEQARNRRVEIVI 336
>gi|332977323|gb|EGK14111.1| OmpA/MotB family protein [Psychrobacter sp. 1501(2011)]
Length = 552
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 1/164 (0%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
K + N + + ++ + + G + V V
Sbjct: 346 DIKAAAPELNVIAAGPLDLDAEIKQSIANATTAMDNLGENPDPKDVARALSLQVINFEVD 405
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ + + +L ++ P+ + I HTDS G +N +SQ RA+ +K YL+ +
Sbjct: 406 KADIPEVNKAVLDRAVEVMKNVPNMQLMILGHTDSDGDDAHNQELSQRRAESVKQYLVSK 465
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
GV +++ ++ +G PI TN T G+ N+RIE ++ +
Sbjct: 466 GVDASKLMT-KGMGETDPIATNQTDNGKFRNRRIEFTVYDEATM 508
>gi|288940691|ref|YP_003442931.1| peptidoglycan-associated lipoprotein [Allochromatium vinosum DSM
180]
gi|288896063|gb|ADC61899.1| peptidoglycan-associated lipoprotein [Allochromatium vinosum DSM
180]
Length = 177
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 59/177 (33%), Gaps = 13/177 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L M T ++GC S
Sbjct: 13 LLTVMLGGTGLAGCASKPAPSDTASRPAPIQGRPATTAPMESTRPTYAGPWEDPSSP--- 69
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
Y ++ ++L +++ A L P T + ++ HTD GT +
Sbjct: 70 ---------LYQRTIYFDYDTAEIKPQYLDVIRTHARYLGSQPGTRVTLEGHTDERGTRE 120
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL +S +RAD ++ +++ +++ + + P D ++ + N+R+ IQ
Sbjct: 121 YNLALSDQRADSVRRFMLAE-GVPANQMTILSYGEERPADPGHSEQSWRLNRRVIIQ 176
>gi|124008000|ref|ZP_01692700.1| peptidoglycan associated periplasmic protein, putative [Microscilla
marina ATCC 23134]
gi|123986584|gb|EAY26383.1| peptidoglycan associated periplasmic protein, putative [Microscilla
marina ATCC 23134]
Length = 472
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ ++++ + + L+ L + +L P ++I++HTD++G+
Sbjct: 349 VKLTKLKTGAKIALNDIYFDFNSAALKDSSFIELNRVVKMLQTNPKVKLSIEAHTDNVGS 408
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NL +S RA + YL ++ + NR ++ +GF P+ N +K + N+R+E+++
Sbjct: 409 KAKNLKLSNRRAKSVADYLKEKKIDQNRLVT-KGFGEDRPLVPNTSKKNKAKNRRVELRV 467
Query: 183 F 183
Sbjct: 468 I 468
>gi|187933571|ref|YP_001885053.1| chemotaxis protein MotB [Clostridium botulinum B str. Eklund 17B]
gi|187721724|gb|ACD22945.1| chemotaxis protein MotB [Clostridium botulinum B str. Eklund 17B]
Length = 247
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 65/168 (38%), Gaps = 6/168 (3%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV 86
D + S +D + + + + + + V F +
Sbjct: 81 GESDTEGVIDAESLGKESMYKDVKDYVEKNNLSGAMDIVQDERGVILELKDSVLFESGQA 140
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLI 142
L +L + T+++ P++VI ++ HTD++ +N +S +RA + Y +
Sbjct: 141 DLIPGSKEVLDKVDTLISALPNSVI-VEGHTDNVPISNYKYASNWELSTQRAVNVVKYFV 199
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + S G+ PI N+++ + N+R+ I I + ++
Sbjct: 200 ETKSNDPMKFSAAGYGEYRPIVYNNSEENKAKNRRVNILIINEKDNEE 247
>gi|332534220|ref|ZP_08410065.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Pseudoalteromonas haloplanktis ANT/505]
gi|332036300|gb|EGI72771.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Pseudoalteromonas haloplanktis ANT/505]
Length = 180
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 76/181 (41%), Gaps = 7/181 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +MT ++ C +S + +N ++ ++ D E Q
Sbjct: 6 ILKGLLIAVPVMT-LAACSSSS----DIDEGAANQSNQGVVEQSTNTDTVEVATISPEQQ 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + V + +E K+ +L+ A L + PS + I+ H D
Sbjct: 61 AEEQLRQKYEALR-QEQVIYFDFDKATVEGKYADLLRAHAEFLVQNPSVKVLIEGHADER 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + R ++ YL+ S +SV + + P+ + T+ N+R +
Sbjct: 120 GTPEYNIALGEHRGQAVEKYLLSL-GVSASQMSVVSYGEEKPMVKSRTESAFAKNRRAVL 178
Query: 181 Q 181
Sbjct: 179 V 179
>gi|255531842|ref|YP_003092214.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255344826|gb|ACU04152.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 445
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT-CYIPVHVSFVSEVFLEKK 91
+ V G + + +++T +VV+ + I + + + K
Sbjct: 300 GTASGTVVDGSGCPIKVQ----REVIKETKVVVTEADRKVVDEAIKNLEFDLGKATIRAK 355
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L +A +L + + + + HTD+ G++ NL +S+ERA+ IK+YL+ +G +++R
Sbjct: 356 SYATLNKVAALLIE-KNFSLKLAGHTDNTGSMALNLRLSKERAEAIKAYLVSQGANASR- 413
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I G+ PI +N T GRQ N+R+E +
Sbjct: 414 IEATGYGPNQPIASNKTAEGRQKNRRVEFTL 444
>gi|149202036|ref|ZP_01879009.1| OmpA domain protein [Roseovarius sp. TM1035]
gi|149144134|gb|EDM32165.1| OmpA domain protein [Roseovarius sp. TM1035]
Length = 635
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 59/160 (36%), Gaps = 2/160 (1%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFV 83
K + + + S+D E + + +
Sbjct: 442 KTASAEIAQFLAEKLGEAEQYSIDVTYKEALDPVAGLPTPEECEAQIAGIQAERKINFEP 501
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
++ + ++ IA +L K + I HTDS G N +S RA + L
Sbjct: 502 GSAKIDAQGAAIMDDIADVLKKCGEVRMEIGGHTDSQGGEDMNAQLSLSRARAVLDELRM 561
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R V ++ I +G+ PI N+T+ GR+ N+RIE ++
Sbjct: 562 RRVLTSS-IDAKGYGESVPIADNETEEGRETNRRIEFRLI 600
>gi|91787678|ref|YP_548630.1| OmpA/MotB [Polaromonas sp. JS666]
gi|91696903|gb|ABE43732.1| OmpA/MotB [Polaromonas sp. JS666]
Length = 214
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 66/215 (30%), Gaps = 27/215 (12%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKV-----------------------FLHKSND 35
M K ++ + ++ G + + K
Sbjct: 1 MKKLNKVAMLFASAALVTAAGAQTIDNWKNGNNELVWKNGTNELCWRDANWTPATAAPGC 60
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ + A V+ Y + ++ +
Sbjct: 61 DGAIVAPPAPAPAAAPAPAPRAAAPAPAPVAPPAATKVTYAADAFFDFDKSVIKPEGKAK 120
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + + VI HTDS+G+ N +S R++ +K+YL+ + +
Sbjct: 121 LDDLIGKIKDINLEVIIAVGHTDSVGSDTYNQKLSVRRSEAVKAYLVSK-GIEKNRVYTE 179
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF-PRGNIK 189
G K P+ N T GR N+R+EI++ R N K
Sbjct: 180 GKGEKQPVADNKTAEGRAKNRRVEIEVVGTRANKK 214
>gi|294651528|ref|ZP_06728837.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194]
gi|292822551|gb|EFF81445.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194]
Length = 160
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 64/181 (35%), Gaps = 28/181 (15%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ + T++GC + L+ G
Sbjct: 8 KISFIALLCLTLAGCLS--------------------------FGPLKYRQVKMLKQEGF 41
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V++ G + + ++ ++ + + +A LNK+ + I HTD +G
Sbjct: 42 VLTDEGWSLGLP-ERLLFDFNKSDIKPEHANEIARLAKQLNKYDLQKLKIVGHTDDVGNP 100
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N +S+ERA + + ++V G P N ++ R +N+R+ + I
Sbjct: 101 EYNQKLSEERAQSVSMIFV-NEGFKQNNLTVIGRGSSQPYLPNTSEENRASNRRVAVIII 159
Query: 184 P 184
P
Sbjct: 160 P 160
>gi|238750181|ref|ZP_04611684.1| OmpA domain protein [Yersinia rohdei ATCC 43380]
gi|238711725|gb|EEQ03940.1| OmpA domain protein [Yersinia rohdei ATCC 43380]
Length = 560
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 80 VSFVSEVFLEKKFL--PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ +L+ + +L K P T + I H+D+ G+ N+ +S++RA V+
Sbjct: 446 LFDSNSSKLKPNKQTNDILKSLLYLLEKNPDTKVLIIGHSDNTGSPSFNMKLSEQRAQVV 505
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+LI+ + VRG PI +N+TK+G+ N+R+E+ + P +
Sbjct: 506 GDWLIKNSSIPVNNLIVRGKGALEPIASNNTKIGQDQNRRVEVLLLPTQD 555
>gi|217973703|ref|YP_002358454.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS223]
gi|217498838|gb|ACK47031.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS223]
Length = 178
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 61/178 (34%), Gaps = 8/178 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + +S C S E + + +N + G + Q
Sbjct: 8 KAMLVALPIMALSACSSTS-ESETDAMGSTNGSGSELNGGGIQTGGVGAMLSAEEQQRQQ 66
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ I ++ F +L+ T L + PS + I+ H D GT
Sbjct: 67 LEDLRKQHII------YFDFDRSEVQTDFAAILEAHGTYLVEHPSVRVLIEGHADERGTP 120
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA + +Q +SV + + P+D + T G N+R +
Sbjct: 121 EYNIALGERRAKAVAK-YLQGMGVQPTQMSVVSYGEEKPLDFSRTDEGFGKNRRAVLV 177
>gi|114048539|ref|YP_739089.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113889981|gb|ABI44032.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 372
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 49/109 (44%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++K++ ++ +A LNK P + I H ++G N+ +S +RA
Sbjct: 255 DVGSIQFANDSAVVKKEYYKDIERLANYLNKNPEFTVEIAGHASNVGKPDYNMTLSDKRA 314
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
D + L+++ S ++ G+ P+ DTK N+RIE +
Sbjct: 315 DAVAKILVEKYGISQSRVTSNGYGITKPLVAGDTKEAHAANRRIEAIVT 363
>gi|254299066|ref|ZP_04966516.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 406e]
gi|157809033|gb|EDO86203.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 406e]
Length = 169
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 62/184 (33%), Gaps = 21/184 (11%)
Query: 1 MIKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K+L L+ M ++ ++ C + + + T +
Sbjct: 1 MSKKLRLAFAMLMIGALAACKSGVKLDEHANQGDAVSTQPNPENVAQ------------- 47
Query: 59 QDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + D ++ ++ +LQ A L P I IQ +T
Sbjct: 48 ----VTVDPLNDPNSPLAKRSVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNT 103
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ + + + + P+ + N+R
Sbjct: 104 DERGTSEYNLALGQKRAEAVRR-ALSLLGVGDAQMEAVSLGKEKPVALGHDEASWAQNRR 162
Query: 178 IEIQ 181
++
Sbjct: 163 ADLV 166
>gi|317051743|ref|YP_004112859.1| peptidoglycan-associated lipoprotein [Desulfurispirillum indicum
S5]
gi|316946827|gb|ADU66303.1| peptidoglycan-associated lipoprotein [Desulfurispirillum indicum
S5]
Length = 187
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 66/183 (36%), Gaps = 5/183 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
K L + M + G A ++ + + V++ + E Q++ ++
Sbjct: 4 FKGLFALLAGMIFLVAVGCAP-QQVVIEDDAAVSEPTVSETTTPTETTTAPEMQIEDREQ 62
Query: 62 GIVVSRIGDMITC---YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
S + I + + +L L P+ I I+ H D
Sbjct: 63 YAFTSPVLGKIYLDGTELYTVHFDFDRSSIRPDARKVLDNNIAYLKNNPNARIVIEGHCD 122
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ NL + RA +K YL+ G+ ++R ++ + + P+D + Q N+R
Sbjct: 123 ERGSSDYNLALGDRRAQSVKDYLVTGGIDASR-LTTISYGKERPVDPRSNEWAWQKNRRG 181
Query: 179 EIQ 181
E
Sbjct: 182 EFV 184
>gi|220927721|ref|YP_002504630.1| OmpA/MotB domain protein [Clostridium cellulolyticum H10]
gi|219998049|gb|ACL74650.1| OmpA/MotB domain protein [Clostridium cellulolyticum H10]
Length = 259
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 66/170 (38%), Gaps = 11/170 (6%)
Query: 31 HKSNDTDIVNKRFG-SSLDKAEDEFQMQLQDTG----IVVSRIGDMITCYIPVHVSFV-S 84
+ + ++ + ++ E E + G + V+ I I + F
Sbjct: 76 PATMPSPVIPSKIEDQQMEALEKEINSLVDSEGLKGNVAVTMQERGIVVTINEKILFKSG 135
Query: 85 EVFLEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKS 139
+E K + I L+K P+ I ++ HTD++ +N +S RA +
Sbjct: 136 SAIIEPKDQDTVIKIGKDILSKIPNKHIRVEGHTDNVPMKSTLYASNWELSAGRAINVLK 195
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
L+++G + + I + P+ N T R N+R++I I + K
Sbjct: 196 LLVEKGGINPKMIHPVPYGEYSPLVPNTTDANRAKNRRVDIVILRDSSSK 245
>gi|218549686|ref|YP_002383477.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
fergusonii ATCC 35469]
gi|218357227|emb|CAQ89862.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
fergusonii ATCC 35469]
gi|324114316|gb|EGC08285.1| peptidoglycan lipoprotein [Escherichia fergusonii B253]
gi|325498076|gb|EGC95935.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
fergusonii ECD227]
Length = 173
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 20/184 (10%)
Query: 1 MIKELGLSMFIMTTISGCGL---ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
++K L +++ +M I+ C AS + + L+ TDI S ++ Q
Sbjct: 6 VLKGLMIALPVM-AIAACSSNKNASNDGSEGMLNGGAGTDINGGNGNMSSEEQARLQMQQ 64
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
LQ I + + + F ML A L PS + ++ H
Sbjct: 65 LQQNNI---------------VYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHA 109
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + N+ + + RA+ + +Q S IS+ + + P + N+R
Sbjct: 110 DERGTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRR 168
Query: 178 IEIQ 181
+
Sbjct: 169 AVLV 172
>gi|189347522|ref|YP_001944051.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
gi|189341669|gb|ACD91072.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
Length = 349
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 64/156 (41%), Gaps = 3/156 (1%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K ++K+ + + + + ++ G + ++
Sbjct: 195 KDDSVYKARRGAYAAVDIIETRPMQQKMVTVSADEMSRSITSTG---KVSLYGIYFDTNK 251
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
++ P L IA +L K P+ + + HTD+ G + N+ +S+ RAD + L +
Sbjct: 252 ADIKPASKPALGEIAKLLKKQPAMKLHVVGHTDNAGGYEFNVSLSKRRADAVVGVLQKEY 311
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ ++ G AY P+ +N + GR N+R+E+
Sbjct: 312 GIAPGRLTANGVAYLAPVASNAAEAGRAKNRRVELV 347
>gi|313112366|ref|ZP_07798128.1| hypothetical protein PA39016_004320000 [Pseudomonas aeruginosa
39016]
gi|310884630|gb|EFQ43224.1| hypothetical protein PA39016_004320000 [Pseudomonas aeruginosa
39016]
Length = 372
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFP 107
+ ++ + V D I F S + +F P+L IA L K
Sbjct: 230 RLARFLADDIKAQRVAVEDAVDRSVVTIRGDELFASASASVRDEFQPLLLRIADALRKVK 289
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + H+D+ +N +SQ RA + L + R + G + P+
Sbjct: 290 G-QVLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGDAGR-FTAEGRSDTEPV 347
Query: 164 DTNDTKVGRQNNQRIEIQIFPRG 186
TN + GR N+R+EI +F G
Sbjct: 348 ATNASAEGRARNRRVEITVFAEG 370
>gi|300770792|ref|ZP_07080670.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300762349|gb|EFK59167.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 438
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ G L AE + ++ +V ++ I + + +
Sbjct: 295 TPSGTKVDGAGCPLPVAETKVVEKI----VVTEEDRKVVDEAIKNLEFDLGKSTIRSTSY 350
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
P L +A++L + + + + HTD+ G++K NL +S+ERA+ +K+YL +G + +R I
Sbjct: 351 PSLDRVASLLIE-KNFSLKLAGHTDNTGSMKTNLRLSKERAEAVKAYLSGKGANPSR-IE 408
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G+ PI +N T GRQ N+R+E +
Sbjct: 409 ATGYGPNQPIASNATAEGRQQNRRVEFTL 437
>gi|330966520|gb|EGH66780.1| ompA family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 320
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPMLQL 98
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 82 KVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPITR 141
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 142 LAKVVEGDQKTAVLILGHADTSGPTEGNQKISQERAQSVAAIFRL-SGLERNRLSQRGMG 200
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 201 AVMPRAANDSLEGRALNRRVEILMTPQDTMR 231
>gi|302342669|ref|YP_003807198.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
gi|301639282|gb|ADK84604.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
Length = 244
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 69/152 (45%), Gaps = 6/152 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLP 94
+++ ++ + + + D + V GD + + + F + + L
Sbjct: 88 SELTGRQTDPIMQDIREVTDQKNLDDVVEVIDQGDKVILRVKGQLLFNTGSSDINPQALG 147
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNR 150
+L+ IA ++++ P + ++ HTDS +N +S RA + YLI++GVS +R
Sbjct: 148 VLKAIADVVDRNPGWRLDVKGHTDSRPISSVKFASNWELSSLRATAVLRYLIEQGVSPSR 207
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ G+A + + ++ N+R+E +
Sbjct: 208 -LTATGYADTQRLVPDSSEENMARNRRVEFVL 238
>gi|153832533|ref|ZP_01985200.1| peptidoglycan-associated lipoprotein [Vibrio harveyi HY01]
gi|148871328|gb|EDL70200.1| peptidoglycan-associated lipoprotein [Vibrio harveyi HY01]
Length = 173
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 69/181 (38%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M ++ C + +T + +D + +L++
Sbjct: 6 VLKGLLIAIPVM-AMTACSSSDDAASNTG--AETNTGASETTVVTPIDPNGQLTEQELKE 62
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A+ L+K P+ + I+ H D
Sbjct: 63 QALRETQT----------IYFAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADER 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +YL IS+ + + P+ ++ N+R +
Sbjct: 113 GTPEYNIALGERRAEAVSNYLQAL-GVQADQISIVSYGEEKPLLLGQSEEVYAKNRRAVL 171
Query: 181 Q 181
Sbjct: 172 V 172
>gi|330971005|gb|EGH71071.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 317
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 199
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G ++ N ISQERA + + +S RG
Sbjct: 200 TRLAKVVEGDQKTAVLILGHADTSGPIEANQKISQERAQSVAAIFRL-SGLERNRLSQRG 258
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 259 MGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 291
>gi|194434867|ref|ZP_03067114.1| OmpA domain protein [Shigella dysenteriae 1012]
gi|194416886|gb|EDX33008.1| OmpA domain protein [Shigella dysenteriae 1012]
gi|332089116|gb|EGI94226.1| ompA family protein [Shigella dysenteriae 155-74]
Length = 550
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V+ T + + V + L+ +L + P +I + +T
Sbjct: 415 PEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYT 474
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G K+N +S RA+ ++++++Q +V+G P TNDT GR N+R
Sbjct: 475 DATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRR 534
Query: 178 IEIQIFPRGN 187
++I + PR +
Sbjct: 535 VKISLVPRSD 544
>gi|330889603|gb|EGH22264.1| OmpA family protein [Pseudomonas syringae pv. mori str. 301020]
Length = 381
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 141 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 200
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 201 TRLAKVVEGDQKTAVLILGHADTSGPTEANQKISQERAQSVAAIFRL-SGLERNRLSQRG 259
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 260 MGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 292
>gi|320325666|gb|EFW81728.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. B076]
Length = 381
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 141 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 200
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 201 TRLAKVVEGDQKTAVLILGHADTSGPTEANQKISQERAQSVAAIFRL-SGLERNRLSQRG 259
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 260 MGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 292
>gi|107100485|ref|ZP_01364403.1| hypothetical protein PaerPA_01001510 [Pseudomonas aeruginosa PACS2]
Length = 188
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQ 131
T + ++ L IA L + ST ++I HTDS+G+ N +S+
Sbjct: 75 TIVVRDLHFAFDSSKVDAADSEKLNGIAERLKGEAASTRLSITGHTDSVGSDAYNQKLSE 134
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ + +YLI GV S+ + V+G P+ N T+ GR N+R+EI I
Sbjct: 135 RRANAVANYLIDAGVPSSIIVGVQGLGESQPVADNKTREGRAENRRVEILI 185
>gi|238893777|ref|YP_002918511.1| peptidoglycan-associated outer membrane lipoprotein [Klebsiella
pneumoniae NTUH-K2044]
gi|238546093|dbj|BAH62444.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 182
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 64/181 (35%), Gaps = 13/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C K + + ++ G + + Q
Sbjct: 14 VLKGLMIALPVM-AIAACSS-----NKNASNDQSGEGMLGAGTGMDANGNGGNMSSEEQA 67
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + I + + + F ML A L PS + ++ H D
Sbjct: 68 RLQMQQLQQNNIV------YFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 121
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 122 GTPEYNIALGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 180
Query: 181 Q 181
Sbjct: 181 V 181
>gi|126173976|ref|YP_001050125.1| OmpA domain-containing protein [Shewanella baltica OS155]
gi|153000268|ref|YP_001365949.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS185]
gi|160874901|ref|YP_001554217.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS195]
gi|304409845|ref|ZP_07391465.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS183]
gi|307304201|ref|ZP_07583954.1| peptidoglycan-associated lipoprotein [Shewanella baltica BA175]
gi|125997181|gb|ABN61256.1| OmpA domain protein [Shewanella baltica OS155]
gi|151364886|gb|ABS07886.1| Peptidoglycan-associated lipoprotein [Shewanella baltica OS185]
gi|160860423|gb|ABX48957.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS195]
gi|304352363|gb|EFM16761.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS183]
gi|306913099|gb|EFN43522.1| peptidoglycan-associated lipoprotein [Shewanella baltica BA175]
gi|315267138|gb|ADT93991.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS678]
Length = 178
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 8/178 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + +S C S + + +N + + Q +
Sbjct: 8 KAMLVALPIMALSACSSTSESETDAMGSTNGSGSELNGGGIQTGGVGAMLSAEEQQRQQL 67
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
R +I ++ F +L+ T L + PS + I+ H D GT
Sbjct: 68 EDLRKQHII-------YFDFDRSEVQTDFAAILEAHGTYLVEHPSVRVLIEGHADERGTP 120
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA + +Q +SV + + P+D + T G N+R +
Sbjct: 121 EYNIALGERRAKAVAK-YLQGMGVQPSQMSVVSYGEEKPLDFSRTDEGFGKNRRAVLV 177
>gi|117619885|ref|YP_856319.1| flagellar motor protein MotB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561292|gb|ABK38240.1| chemotaxis protein MotB [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 291
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIAT 101
+ K E + + Q++ + V ++G + I F FL+ +F+P++ I+
Sbjct: 133 VQVTKKKLEQQLKAQIESKDLEVEQLGSQLVIRIGEKALFPADSAFLQPQFIPLVNKISG 192
Query: 102 ILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IL P + + HTD+ ++N +S R+ I L+ + +G
Sbjct: 193 ILADIPG-KVVVTGHTDNSQAPVELYRSNWELSVLRSASIVHTLLTNPKLDATRVIAQGV 251
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
A P NDT RQ N+R+EI +
Sbjct: 252 ADAQPRYPNDTPEHRQANRRVEITL 276
>gi|110640949|ref|YP_668677.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli 536]
gi|117622932|ref|YP_851845.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli APEC O1]
gi|215485763|ref|YP_002328194.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O127:H6 str. E2348/69]
gi|218557654|ref|YP_002390567.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli S88]
gi|218688532|ref|YP_002396744.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli ED1a]
gi|227884292|ref|ZP_04002097.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli 83972]
gi|300992344|ref|ZP_07179867.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 200-1]
gi|300993167|ref|ZP_07180250.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 45-1]
gi|301051339|ref|ZP_07198162.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 185-1]
gi|306812852|ref|ZP_07447045.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli NC101]
gi|312965177|ref|ZP_07779414.1| peptidoglycan-associated lipoprotein [Escherichia coli 2362-75]
gi|331656760|ref|ZP_08357722.1| peptidoglycan-associated lipoprotein [Escherichia coli TA206]
gi|331682171|ref|ZP_08382793.1| peptidoglycan-associated lipoprotein [Escherichia coli H299]
gi|110342541|gb|ABG68778.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli
536]
gi|115512056|gb|ABJ00131.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli
APEC O1]
gi|215263835|emb|CAS08173.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O127:H6 str. E2348/69]
gi|218364423|emb|CAR02103.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli S88]
gi|218426096|emb|CAR06914.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli ED1a]
gi|222032477|emb|CAP75216.1| Peptidoglycan-associated lipoprotein [Escherichia coli LF82]
gi|227839044|gb|EEJ49510.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli 83972]
gi|281177884|dbj|BAI54214.1| peptidoglycan-associated lipoprotein [Escherichia coli SE15]
gi|294493682|gb|ADE92438.1| peptidoglycan-associated lipoprotein [Escherichia coli IHE3034]
gi|300297001|gb|EFJ53386.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 185-1]
gi|300305361|gb|EFJ59881.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 200-1]
gi|300406697|gb|EFJ90235.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 45-1]
gi|305853615|gb|EFM54054.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli NC101]
gi|307552592|gb|ADN45367.1| peptidoglycan-associated lipoprotein [Escherichia coli ABU 83972]
gi|307627845|gb|ADN72149.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli UM146]
gi|312290268|gb|EFR18151.1| peptidoglycan-associated lipoprotein [Escherichia coli 2362-75]
gi|312945265|gb|ADR26092.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O83:H1 str. NRG 857C]
gi|315287144|gb|EFU46556.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 110-3]
gi|315292655|gb|EFU52007.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 153-1]
gi|315299256|gb|EFU58508.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 16-3]
gi|323191086|gb|EFZ76351.1| peptidoglycan-associated lipoprotein [Escherichia coli RN587/1]
gi|323953133|gb|EGB49000.1| peptidoglycan lipoprotein [Escherichia coli H252]
gi|323958485|gb|EGB54191.1| peptidoglycan lipoprotein [Escherichia coli H263]
gi|324009565|gb|EGB78784.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 57-2]
gi|324010464|gb|EGB79683.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 60-1]
gi|330910492|gb|EGH39002.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli AA86]
gi|331055008|gb|EGI27017.1| peptidoglycan-associated lipoprotein [Escherichia coli TA206]
gi|331080595|gb|EGI51771.1| peptidoglycan-associated lipoprotein [Escherichia coli H299]
Length = 173
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C ++ G + + Q
Sbjct: 6 VLKGLMIALPVM-AIAACSSNKNASNDGSE------GMLGAGTGMDANGGNGNMSSEEQA 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + I + + + F ML A L PS + ++ H D
Sbjct: 59 RLQMQQLQQNNIV------YFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 113 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 171
Query: 181 Q 181
Sbjct: 172 V 172
>gi|121602322|ref|YP_988503.1| peptidoglycan-associated lipoprotein [Bartonella bacilliformis
KC583]
gi|120614499|gb|ABM45100.1| peptidoglycan-associated lipoprotein [Bartonella bacilliformis
KC583]
Length = 174
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 57/180 (31%), Gaps = 21/180 (11%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + + +++GCG KK + N S
Sbjct: 12 LTMVFVCLLSVAGCG------KKNINPTNGMGFFANNAEYSY--------------GNAT 51
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
D + +E +L A L +P I I+ H D GT +
Sbjct: 52 PGSEQDFAITVGDRVFFSLDSSVIEADAQRILVRQAEWLLLYPHHTIMIEGHADDRGTRE 111
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
NL + Q RA ++ YL+ S + + + + P+ D N+R+ I I
Sbjct: 112 YNLALGQRRAIAVRDYLVSL-GVSPQRMKTMSYGKERPVAVCDDISCWNQNRRVVISITS 170
>gi|330962099|gb|EGH62359.1| hypothetical protein PMA4326_26442 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 437
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 7/143 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ ++ + V D I + + F P++ IA + K
Sbjct: 295 RLAGFLADDIKAGKVAVEDAVDRSVVTIRGDELFASGSATIVDDFQPLMLRIADAIRKVK 354
Query: 108 STVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ I H+D+ +N +SQ RA+ + L + R + G + P+
Sbjct: 355 G-DVRITGHSDNRPIATLRFPSNWALSQARAEQVLRILAAKTGQPQR-FTAEGRSDTEPL 412
Query: 164 DTNDTKVGRQNNQRIEIQIFPRG 186
+N T GR N+R+EI + G
Sbjct: 413 GSNATAEGRAKNRRVEITVLAEG 435
>gi|255016489|ref|ZP_05288615.1| putative flagellar motor protein MotB [Bacteroides sp. 2_1_7]
Length = 280
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 6/153 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
N++ + L +D + V+ + + + F ++K+ L
Sbjct: 120 AQNEKVQNLLSSVKDALLG-FNSDELTVTEKNGKVYVAMSDKLLFQSGSARVDKRGKEAL 178
Query: 97 QLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+A +LNK + I+ HTDS K+N +S RA + L + + I
Sbjct: 179 AKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQI 238
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+ N+T GR N+R EI + P+
Sbjct: 239 QPCGRGEFMPVADNETADGRSKNRRTEIIMAPK 271
>gi|225849649|ref|YP_002729883.1| flagellar motor protein MotB [Persephonella marina EX-H1]
gi|225645473|gb|ACO03659.1| flagellar motor protein MotB [Persephonella marina EX-H1]
Length = 231
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 6/142 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIAT 101
+ L K + + L+ GI + K+ +P+L +
Sbjct: 88 NKLQKDLNRLEQLLEKAGIEAEVEKHGSIIRFRLNTERMFPSGSATPYKEVVPLLLEVCK 147
Query: 102 ILNKFPSTVIAIQSHTDSIGTL-KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L + I I+ HTD+ K+NL +S ERA + + +R +S RG+
Sbjct: 148 RLKET-QFPITIEGHTDNTPIRFKSNLELSAERALSVLKLF-KSCGYPDRLLSARGYGEY 205
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
P+ NDT R N+RIEI I
Sbjct: 206 RPLVPNDTPENRAKNRRIEIVI 227
>gi|148652125|ref|YP_001279218.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148571209|gb|ABQ93268.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1]
Length = 537
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 1/158 (0%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
K + N F + + ++ + + + G + V V
Sbjct: 342 DIKAAAPELNVVATGPVDFDAEVKQSIADATTAMDNLGENPDPKDVARALSLQVINFAVD 401
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ + + +L ++ + P + I HTDS G N +SQ RA+ +K+YL+ +
Sbjct: 402 KTDIPAENQAVLDRAVEVMKQVPDMQLLILGHTDSDGDDAYNKDLSQRRAEAVKAYLVSK 461
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G + + ++ +G PI TN+T+ G+ N+RIE +
Sbjct: 462 GADAAKLMT-KGMGETDPIATNETENGKFRNRRIEFTV 498
>gi|326772136|ref|ZP_08231421.1| OmpA family protein [Actinomyces viscosus C505]
gi|326638269|gb|EGE39170.1| OmpA family protein [Actinomyces viscosus C505]
Length = 529
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 61/162 (37%), Gaps = 4/162 (2%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS 84
K N D++ K D + + D + T + V+F +
Sbjct: 190 KEAEVDFNVDDVIAKANLQGPDPGPFKLERATLAMDGSSDTKQDEKSTTVTVAGDVTFAT 249
Query: 85 EVF-LEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ L + +L + + K+P + I HTD + +N +S+ RA + L
Sbjct: 250 DSDQLSTQADSVLATVVEQIKKYPSGGELTITGHTDDVADDAHNQDLSERRAKAVSERLK 309
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ S SV G P NDT RQ N+R+EI + P
Sbjct: 310 KLTDLSAWKESVSGKGESSPRVPNDTDERRQINRRVEITLTP 351
>gi|189468503|ref|ZP_03017288.1| hypothetical protein BACINT_04906 [Bacteroides intestinalis DSM
17393]
gi|189436767|gb|EDV05752.1| hypothetical protein BACINT_04906 [Bacteroides intestinalis DSM
17393]
Length = 299
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +L++ + V + ++ + ++ + + ++ L IA I+ + + +
Sbjct: 145 REELKE--VDVKVLKGVVYISLADNMLYKSGSYEINERAGETLSKIAKIITDYKDYEVLV 202
Query: 114 QSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ +TD S ++NN +S RA + L + + +S G P+ NDT+
Sbjct: 203 EGNTDNVPISRPNIRNNWDLSALRASSVVQALQNQYGVDPKRLSAAGRGEYNPLTDNDTE 262
Query: 170 VGRQNNQRIEIQIFPR 185
+G+Q N+R +I I P+
Sbjct: 263 LGKQRNRRTQIIITPK 278
>gi|84684131|ref|ZP_01012033.1| OmpA domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84667884|gb|EAQ14352.1| OmpA domain protein [Rhodobacterales bacterium HTCC2654]
Length = 315
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 63/176 (35%), Gaps = 4/176 (2%)
Query: 9 MFIMTTISGCGLASR-EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
MF +S A + +V V + + Q L D G +
Sbjct: 140 MFASVLVSRSASAGYIQVIEVGPRGELPDPTVTSSKAETPETQTAVPQEALGDVGQAMES 199
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+G + + L L +A L P+ +A+ HTD+ G L N+
Sbjct: 200 VGRYV---LTDLRFETGSSALGDGTYDSLTDLAAYLKSHPTRRVALVGHTDAEGPLSANI 256
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
IS+ RA + L+ + + G Y P+ +N + GR N+R+E +
Sbjct: 257 AISKRRATSVLERLVTAHGVPSSQLEAEGIGYLSPLASNQSDEGRTFNRRVEAILV 312
>gi|218780987|ref|YP_002432305.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218762371|gb|ACL04837.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 199
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 62/190 (32%), Gaps = 9/190 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLA-SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MI L++ ++GC S + S T V + + +
Sbjct: 10 MITAAILALICTGALTGCQKKVSTTPEMTSTGTSTSTGTVASSGAGTTTASSSSVSEEPM 69
Query: 60 DTGI-------VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
V+ + L + + +L+ A L PS +
Sbjct: 70 GGDTGPEAVKPSVNVDEMRVRFNTENVHFAFDSSDLSPEAMAILKDKAFFLRLNPSKGVL 129
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ H D G+L+ NL + RA+ K+ + R I+ + + P+D +
Sbjct: 130 IKGHCDERGSLEYNLALGDRRANSAKN-FLTDLGIDARRINTISYGEEMPLDPASNEAAW 188
Query: 173 QNNQRIEIQI 182
N+R E +
Sbjct: 189 AVNRRCEFAL 198
>gi|113970702|ref|YP_734495.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|114047931|ref|YP_738481.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113885386|gb|ABI39438.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
gi|113889373|gb|ABI43424.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 178
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 62/178 (34%), Gaps = 8/178 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + IS C S E + + ++ + G + Q
Sbjct: 8 KAMLVALPIMAISACSSTS-ESETDAMGSTSGSGSELNGGGVQTGGIGGMLSPEEQQRQQ 66
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + I ++ +F +L+ T L + PS + I+ H D GT
Sbjct: 67 LEQLRKEHII------YFDFDRSEVQTEFAAVLEAHGTYLVEHPSVRVLIEGHADERGTP 120
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA + +Q +S+ + + P+D T G N+R +
Sbjct: 121 EYNIALGERRAKAVAK-YLQGMGVQPSQMSIVSYGEEKPLDFTRTDEGFAKNRRAVLV 177
>gi|72162680|ref|YP_290337.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Thermobifida fusca YX]
gi|71916412|gb|AAZ56314.1| similar to Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Thermobifida
fusca YX]
Length = 356
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 55/162 (33%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ S D DIVN FQ + +
Sbjct: 192 TPDFLDIPITEAASPDPDIVNTPVAEPRILDFWAFQDDIDGSSSRSETGDTTSIMLSSDV 251
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ ++E L L+ +A ++ +T + I HTD+ G N +S +RA ++
Sbjct: 252 LFDLNESTLTDAADETLRAVAEEIDASSTTTVKIDGHTDNTGNDAINNPLSLDRAKAVEK 311
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L + V G P+ N T+ GR N+R+ I
Sbjct: 312 RLKELITRDGITFEVAGHGSADPVADNGTEEGRAKNRRVTIT 353
>gi|110638113|ref|YP_678322.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110280794|gb|ABG58980.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 631
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + LE+K + L+ + + P+ + + +TD++GT + NL +S R
Sbjct: 523 VTLNNIFFQTNSYQLEEKSISELKKLINFIQINPAQRVELAGYTDNVGTAEANLKLSAMR 582
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + YLI + I+ +G+ P+ N+++ GRQ N+R+EI+I
Sbjct: 583 AKAVYDYLI-QHGIKPAGITYKGYGAASPVADNNSEEGRQKNRRLEIKIL 631
>gi|313675999|ref|YP_004053995.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312942697|gb|ADR21887.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 671
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 1/113 (0%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + L L + ++N + I HTDS G + N ++
Sbjct: 558 EKAEIVLNNVFFAFDSHELLGSSKSELNRMVEVMNDNSQIEVVIIGHTDSTGPEEYNQVL 617
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S++RA + + + + + G P NDT+ R N+R+ ++
Sbjct: 618 SEKRAQSVVN-YLTQNGIDEERLEYLGKGENEPAYPNDTRENRAKNRRVNFKV 669
>gi|283784494|ref|YP_003364359.1| peptidoglycan-associated lipoprotein [Citrobacter rodentium ICC168]
gi|282947948|emb|CBG87512.1| peptidoglycan-associated lipoprotein [Citrobacter rodentium ICC168]
Length = 173
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C ++ G + + + Q
Sbjct: 6 VLKGLMIALPVM-AIAACSSNKNASNDGSE------GMLGAGTGMDANGSGGNMSSEEQA 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + I + + + F ML A L PS + ++ H D
Sbjct: 59 RLQMQQLQQNNIV------YFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 113 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 171
Query: 181 Q 181
Sbjct: 172 V 172
>gi|330957696|gb|EGH57956.1| ompA family protein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 388
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 141 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 200
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A + T + I H D+ G N ISQERA + + +S+RG
Sbjct: 201 TRLAKAVEGDQKTAVLILGHADTSGPTDANQKISQERAQSVAAIFRL-SGLERNRLSLRG 259
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 260 MGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 292
>gi|261409603|ref|YP_003245844.1| OmpA/MotB domain-containing protein [Paenibacillus sp. Y412MC10]
gi|261286066|gb|ACX68037.1| OmpA/MotB domain protein [Paenibacillus sp. Y412MC10]
Length = 271
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 70/195 (35%), Gaps = 25/195 (12%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-------------- 60
I+G K +++ L + E F+ Q ++
Sbjct: 75 ITGTADTENHKNPPPKPAADEEGEDKDNGQEPLTERELAFRAQEEELANFMGLIQQYVKD 134
Query: 61 ----TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
I +S I + F + L+ P+L +A++ +T ++I+
Sbjct: 135 NQLEEDIFISDEPQGIAITLSDRFLFDVGKAELKPGAAPVLGKLASLFGDL-NTTVSIEG 193
Query: 116 HTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
HTD++ K+N +S RA + + ++ G+A P N T
Sbjct: 194 HTDNVPIGRYSSYKDNWELSGARAMSVLRFFLEHSKLDPAGFQYAGYADTRPAADNATAE 253
Query: 171 GRQNNQRIEIQIFPR 185
G+Q N+R+EI + +
Sbjct: 254 GKQKNRRVEITVLRQ 268
>gi|161526078|ref|YP_001581090.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|189349207|ref|YP_001944835.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616]
gi|160343507|gb|ABX16593.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
gi|189333229|dbj|BAG42299.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616]
Length = 316
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 10/161 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLD---KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ K +H + ++L+ ++ ++ + G++ + +
Sbjct: 161 EMKGEVHNEAQRQQIASDMANTLNPTYTIKNGLRVSASEQGLLDQTLANRTIE------F 214
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL
Sbjct: 215 ETGSATLTPQGKQILDQMAAALAKLQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYL 274
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I + + + ++ G PI NDT GR N+RIE ++
Sbjct: 275 ITK-GIAPQQMTTTGVGPDQPIAPNDTAEGRARNRRIEFRV 314
>gi|146276274|ref|YP_001166433.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145554515|gb|ABP69128.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 642
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 1/111 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
++ L +A + + I HTDS G+ N +SQ
Sbjct: 491 VLAGQKITFEPGSAEIDPSARGTLDGLAEVFKDCKGMPLEISGHTDSQGSEGGNKALSQA 550
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ + L R V R +V G+ + PI N + GR+ N+RIE +
Sbjct: 551 RAEAVLMALQGRRVDVGRMKAV-GYGEERPIADNRDEAGREANRRIEFTLL 600
>gi|332828855|gb|EGK01538.1| hypothetical protein HMPREF9455_02070 [Dysgonomonas gadei ATCC
BAA-286]
Length = 290
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 55/130 (42%), Gaps = 5/130 (3%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD- 118
+ + + ++ + ++ + + +K +L IA I+ + + ++ +TD
Sbjct: 141 QDLDIKVLKGVVYISLADNMLYRSGSYEISEKAGEILSKIAKIILDYKDYDVLVEGNTDT 200
Query: 119 ---SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
S ++NN +S RA + L + ++ G P+ +N T G+ N
Sbjct: 201 DPISRPNIRNNWDLSTLRASSVVQALQNNYGVDPKRMTAGGRGEYNPVASNSTIEGKALN 260
Query: 176 QRIEIQIFPR 185
+R +I I P+
Sbjct: 261 RRTQIIITPK 270
>gi|319424730|gb|ADV52804.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 480
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 48/108 (44%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + + + P+L+++AT L + P+ + HTD G N +S+ RA
Sbjct: 368 TLEGLLFDYDSERMLPESKPVLEVLATYLKQNPALSFYVVGHTDDKGERSYNQSLSERRA 427
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L + + ++ G P+ +N G++ N+R+E+ +
Sbjct: 428 AAVIKQLNEAFNIPSVQLTAHGNGEYSPVASNANDTGQRLNRRVELVL 475
>gi|152985769|ref|YP_001345545.1| hypothetical protein PSPA7_0149 [Pseudomonas aeruginosa PA7]
gi|150960927|gb|ABR82952.1| hypothetical protein PSPA7_0149 [Pseudomonas aeruginosa PA7]
Length = 449
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFP 107
+ ++ + V D I F S + +F P+L IA L K
Sbjct: 307 RLARFLAEDIKAQRVAVEDAVDRSVVTIRGDELFASASASVRDEFQPLLLRIADALRKVK 366
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + H+D+ +N +SQ RA + L + R + G + P+
Sbjct: 367 G-QVLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGEAGR-FTAEGRSDTEPV 424
Query: 164 DTNDTKVGRQNNQRIEIQIFPRG 186
TN + GR N+R+EI +F G
Sbjct: 425 ATNASAEGRARNRRVEITVFAEG 447
>gi|330977950|gb|EGH77853.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 378
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 199
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 200 TRLAKVVEGDQKTAVLILGHADTSGPTEANQKISQERAQSVAAIFRL-SGLERNRLSQRG 258
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 259 MGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 291
>gi|261210838|ref|ZP_05925129.1| outer membrane protein A precursor [Vibrio sp. RC341]
gi|260840088|gb|EEX66683.1| outer membrane protein A precursor [Vibrio sp. RC341]
Length = 309
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
D++ F + L L+ +L K P + I HTDS+G+ K N +
Sbjct: 197 DVVVFTSSSEKLFSNNSSLLMSTKS-LEGPLDVLKKDPKLKVNIVGHTDSLGSDKYNQWM 255
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S+ RA + Y I G+S +R I+ G PI N++++GR N+R+EI I+P
Sbjct: 256 SERRAKTVADYFIANGISPSR-ITALGRGESEPIANNNSELGRAQNRRVEINIYP 309
>gi|90021803|ref|YP_527630.1| Fis family transcriptional regulator [Saccharophagus degradans
2-40]
gi|89951403|gb|ABD81418.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 288
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 8/178 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+S KK + T+ + E L + ++ + + I
Sbjct: 55 AFSSSAKKTNKNRSPDTTEAEVAPLKQIEQQLEQALSGVLATGEVTLNGNQNWVEIVIDA 114
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQER 133
+ F + + +L +A I++ F + +A+ HTD KNN +S R
Sbjct: 115 NSFFSSGQATPSDEARTVLNKVADIISPFDNA-VAVGGHTDDTPINNAQFKNNWELSSAR 173
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP-RGNIKK 190
A + + L GVS R S G+ PI N T GR N+R+ +++ R +I K
Sbjct: 174 AVTVVNLLAFAGVSPERM-SAVGYGEYRPIADNQTPEGRSANRRVVLRVARDRADIPK 230
>gi|121998797|ref|YP_001003584.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1]
gi|121590202|gb|ABM62782.1| OmpA/MotB domain protein [Halorhodospira halophila SL1]
Length = 242
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 8/152 (5%)
Query: 37 DIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLP 94
V + LD+A+ E +L++ GI + +T + V F L+ +
Sbjct: 79 PSVLEGLPEPLDEADPVEVPAELEEAGIQAVGEEETLTFRLDDAVLFETGRAELQAEGQA 138
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+ + I ++++ HTD+I G +N +S RA + ++ R
Sbjct: 139 AIDELIPIFQAT-GVRLSVEGHTDNIPIATGQFPSNWELSSARASAVLR-YLEEQGLDPR 196
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G+ PI N+T GR N+R+EI +
Sbjct: 197 RMRAIGYGDIRPIADNETAEGRAENRRVEITL 228
>gi|291280094|ref|YP_003496929.1| flagellar motor protein MotB [Deferribacter desulfuricans SSM1]
gi|290754796|dbj|BAI81173.1| flagellar motor protein MotB [Deferribacter desulfuricans SSM1]
Length = 249
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 7/149 (4%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPM 95
D V K L ++ + + I V + I+ I V F + +P+
Sbjct: 80 DKVKKSQEQMLSGLKNYIEQANLSSQISVVKTDKGISVRIMDSVLFAPGSAEILPSAIPI 139
Query: 96 LQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L+ +A ++ P I ++ HTD S +N +S RA + +LI R
Sbjct: 140 LEKLAAVMRDTP-YNILVEGHTDDIPISTPKYPSNWELSTARAVAVVKFLISR-GVKPEK 197
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S G+A +P+ N T R N+R+EI
Sbjct: 198 LSAAGYAQYHPLVPNITPENRAKNRRVEI 226
>gi|224372379|ref|YP_002606751.1| lipoprotein [Nautilia profundicola AmH]
gi|223589117|gb|ACM92853.1| lipoprotein [Nautilia profundicola AmH]
Length = 195
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 70/196 (35%), Gaps = 13/196 (6%)
Query: 1 MIKELGLS--MFIMTTISGCGLASREKK------KVFLHKSNDTDIVNKRFGSSLDKAED 52
M K+L ++ + + I+GC + + + +++
Sbjct: 1 MNKKLLIATGLAALLMITGCSKQPNLENATETQSAQTTQTTGEATTATTNENETVNTQNA 60
Query: 53 EFQMQLQDTGIVVSRIGDMIT---CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-S 108
+ Q G +S D V + + P ++ +A ++ P +
Sbjct: 61 NVEEQTIGEGTKISVTADQKFAKDLANIVVYFDFDKYNIRPDQWPKVEKLAELIKNNPAN 120
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ I+ + D GT + N + +RA+ +K+ LI + + +++ + P+ T
Sbjct: 121 YTVRIEGNCDEWGTEEYNYALGLKRANSVKNALI-KLGVDPKKLTIISYGELNPVCTAHA 179
Query: 169 KVGRQNNQRIEIQIFP 184
K + N+R P
Sbjct: 180 KWCWRKNRRDNFTYLP 195
>gi|16759688|ref|NP_455305.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|16764119|ref|NP_459734.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|29142539|ref|NP_805881.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|56414134|ref|YP_151209.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|62179323|ref|YP_215740.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161615017|ref|YP_001588982.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|167554283|ref|ZP_02348024.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167995342|ref|ZP_02576432.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168238899|ref|ZP_02663957.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168240607|ref|ZP_02665539.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168264359|ref|ZP_02686332.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168467688|ref|ZP_02701525.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168820116|ref|ZP_02832116.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194444000|ref|YP_002039990.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194450609|ref|YP_002044783.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194735900|ref|YP_002113856.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197263376|ref|ZP_03163450.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197363056|ref|YP_002142693.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|198245566|ref|YP_002214719.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|200390868|ref|ZP_03217479.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204929814|ref|ZP_03220835.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205352013|ref|YP_002225814.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207856193|ref|YP_002242844.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|213027105|ref|ZP_03341552.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
gi|213051768|ref|ZP_03344646.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213423403|ref|ZP_03356390.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213427708|ref|ZP_03360458.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213582020|ref|ZP_03363846.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
gi|213609989|ref|ZP_03369815.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
gi|213649745|ref|ZP_03379798.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213857528|ref|ZP_03384499.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|289827212|ref|ZP_06545932.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25298548|pir||AI0592 peptidoglycan-associated lipoprotein precursor [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16419259|gb|AAL19693.1| tol protein required for outer membrane integrity [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|16501981|emb|CAD05211.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29138170|gb|AAO69741.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|56128391|gb|AAV77897.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|62126956|gb|AAX64659.1| tol protein required for outer membrane integrity, uptake of group
A colicins, and translocation of phage DNA to cytoplasm
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161364381|gb|ABX68149.1| hypothetical protein SPAB_02777 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402663|gb|ACF62885.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194408913|gb|ACF69132.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194711402|gb|ACF90623.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195629206|gb|EDX48574.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197094533|emb|CAR60053.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|197241631|gb|EDY24251.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197288314|gb|EDY27695.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197940082|gb|ACH77415.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199603313|gb|EDZ01859.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204320808|gb|EDZ06009.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205271794|emb|CAR36628.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|205321482|gb|EDZ09321.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205326989|gb|EDZ13753.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205340301|gb|EDZ27065.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205343044|gb|EDZ29808.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205347158|gb|EDZ33789.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206707996|emb|CAR32285.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|261246012|emb|CBG23814.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267992490|gb|ACY87375.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157340|emb|CBW16829.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312911776|dbj|BAJ35750.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|320085020|emb|CBY94809.1| Peptidoglycan-associated lipoprotein Flags: Precursor [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|321226328|gb|EFX51379.1| 18K peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|322615817|gb|EFY12735.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322621376|gb|EFY18232.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322623633|gb|EFY20471.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322628905|gb|EFY25686.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322634885|gb|EFY31615.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322636587|gb|EFY33291.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322647828|gb|EFY44308.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322651360|gb|EFY47742.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322652661|gb|EFY49010.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322658642|gb|EFY54903.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322664929|gb|EFY61120.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322668402|gb|EFY64558.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322670510|gb|EFY66643.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322675250|gb|EFY71326.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322679676|gb|EFY75717.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322684848|gb|EFY80847.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|322713794|gb|EFZ05365.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Choleraesuis str. A50]
gi|323191723|gb|EFZ76976.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323200617|gb|EFZ85692.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323202288|gb|EFZ87336.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323205443|gb|EFZ90409.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323212129|gb|EFZ96954.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323216148|gb|EGA00877.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323221361|gb|EGA05780.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323226784|gb|EGA10975.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230998|gb|EGA15114.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323234169|gb|EGA18258.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238136|gb|EGA22194.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323243571|gb|EGA27589.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323247404|gb|EGA31363.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323251393|gb|EGA35265.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323256484|gb|EGA40216.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323260623|gb|EGA44232.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323264694|gb|EGA48196.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323270958|gb|EGA54393.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|332987686|gb|AEF06669.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
Length = 174
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 64/181 (35%), Gaps = 13/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C K S + G + + +
Sbjct: 6 VLKGLMIALPVM-AIAACSS----NKNASNDGSEGGMLNGAGTGMDANGNGNMSSEEQAR 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + +++ + + + F ML A L PS + ++ H D
Sbjct: 61 LQMQQLQQNNIV-------YFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 113
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 114 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 172
Query: 181 Q 181
Sbjct: 173 V 173
>gi|109899245|ref|YP_662500.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
gi|109701526|gb|ABG41446.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
Length = 186
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 2/177 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ K + L++ I+T ++ C E++ ++ + M+
Sbjct: 6 IFKGITLALPIVTMVA-CSSGPSEEELAAESNRVAAAQAEADRKAAEEAKVQAGNMKPML 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V + V + K+ +L A L K P + I+ H D+
Sbjct: 65 SPEEVMQKEKSALMEDQVVYFDFDRSSVSSKYYSLLDQHAAFLVKNPGQAVVIEGHCDNR 124
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + + RA + + S +SV + + P+DT+ T N+R
Sbjct: 125 GTPEYNIALGERRAKSV-ETYLMNAGVSASQVSVVSYGEEKPVDTSGTAAAFAENRR 180
>gi|326388398|ref|ZP_08209994.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
gi|326207130|gb|EGD57951.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
Length = 172
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 17/185 (9%)
Query: 1 MIKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M ++ + + ++GC +E + + L
Sbjct: 1 MTPKILTASVVLASLALAGCAGKPKELPPQPEAATTTRTPPPPPTPAPAGPVPGSQADFL 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + ++ + +LQ A L K+P I I+ H D
Sbjct: 61 AS-------------VISDTIHFELDKYNVDTESQGILQSQAQWLAKYPGKKITIEGHCD 107
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR- 177
GT + NL + + RA+ K+YL+ GV ++R +V + + PI + N+R
Sbjct: 108 ERGTREYNLALGERRANAAKTYLVGLGVDASRINTVS-YGKERPIALGSDEASWAKNRRA 166
Query: 178 IEIQI 182
+ I +
Sbjct: 167 VTITV 171
>gi|325297323|ref|YP_004257240.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM
18170]
gi|324316876|gb|ADY34767.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170]
Length = 398
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I + + ++K+ P L I ++ P + ++ HTD++G N+ +S++RA+
Sbjct: 292 IDIINFEFDKSTIKKESYPYLDKIVRLMKNTP-IHVVVRGHTDNVGDADYNMELSKKRAE 350
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +YL+ + +S + PI TNDT GR N+R+E +I
Sbjct: 351 AVYNYLL-KAGVEPSHLSYEYYGMTRPISTNDTPEGRLMNRRVEFEIT 397
>gi|332291582|ref|YP_004430191.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332169668|gb|AEE18923.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 327
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 9/158 (5%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKF 92
+ V +++ ++ L + G+ V + + + + F S +
Sbjct: 158 EGVIAAKDATMRVLKESISKALTDFEGKGLTVEQRDGKVYVSLENKLLFDSGSWTVGANG 217
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVS 147
++ + ++L P + I+ HTD++ G L N +S +RA I L
Sbjct: 218 TKAVKQLGSVLADNPDIAVLIEGHTDNVPYGGSGNLAGNWDLSAKRATAIVEILRTNRDI 277
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ ++ G P+ NDT + N+RIE+ + P+
Sbjct: 278 DPKNLTAAGRGEYAPVAENDTAENKAKNRRIEVILTPK 315
>gi|313677086|ref|YP_004055082.1| membrane protein [Marivirga tractuosa DSM 4126]
gi|312943784|gb|ADR22974.1| putative membrane protein [Marivirga tractuosa DSM 4126]
Length = 504
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 2/155 (1%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ND + D +D+ ++ + F +E L +
Sbjct: 352 ANDEYAIGSSREFEDDNFQDQPVKVIEKEYQTSVSRDFSFELRKNFNYGF-NETNLNDEA 410
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L IA ++ P+ + + HTD+IGT N IS+ERA ++ ++ + +
Sbjct: 411 KSYLDDIAVMMEANPALKLKVTGHTDNIGTEDANQKISEERAKGVRD-YLESIGIAAERL 469
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
S G P+ N+T+ R N+R+E I+ +
Sbjct: 470 SYEGKGATAPLYKNNTEENRAKNRRVEFLIYAEKD 504
>gi|298481010|ref|ZP_06999205.1| lipoprotein PG3 [Bacteroides sp. D22]
gi|298273033|gb|EFI14599.1| lipoprotein PG3 [Bacteroides sp. D22]
Length = 255
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 14/190 (7%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI- 72
+ G + + G +DKA E + ++ + + +
Sbjct: 60 ILGGVIGKGKGAAIGAAIGTAVGAGTGALIGKKMDKAAAEAKQ-IEGAQVEQITDNNGLQ 118
Query: 73 --TCYIPVHVSFV-SEVFLEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL----- 123
+ F L L A LN+ ++I +TD+ G
Sbjct: 119 AVKVTFDSGILFTTGNANLSAAAKSALSKFANNVLNQNRDMDVSIYGYTDNQGWKNSTAA 178
Query: 124 ---KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL +SQERA + SYL+ GVS+N+ SV+G P+ +NDT GR+ N+R+E+
Sbjct: 179 QSQQKNLNLSQERAQSVSSYLLSCGVSTNQIKSVQGMGESDPVASNDTAAGREQNRRVEV 238
Query: 181 QIFPRGNIKK 190
++ + K
Sbjct: 239 YMYASEQMIK 248
>gi|167564829|ref|ZP_02357745.1| hypothetical protein BoklE_19905 [Burkholderia oklahomensis EO147]
Length = 439
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V D + F + +++P+L +A LNK
Sbjct: 287 RVAKFLEPEIAAGLVTVRDEADRSVIVLRGDGLFESGSTSVIDRYMPVLIRVADALNKVQ 346
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +TD +N +S+ERA+ + LI + I+ G P+
Sbjct: 347 G-SVRVSGYTDDAPVHTARFASNWDLSRERAEAV-RGLIAARLDRPDRITAEGRGTLDPV 404
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
ND+ R N+R+EI +
Sbjct: 405 APNDSPANRARNRRVEITLM 424
>gi|50083922|ref|YP_045432.1| putative Outer membrane protein precursor (OmpA-like)
[Acinetobacter sp. ADP1]
gi|49529898|emb|CAG67610.1| putative Outer membrane protein precursor (OmpA-like)
[Acinetobacter sp. ADP1]
Length = 355
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 51/100 (51%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++ ++ ++ P + +A L ++P+ I HTD+ G K N +S RA+ +K
Sbjct: 234 VFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIDGHTDNTGPRKLNERLSLARANSVK 293
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S L+ ++ +GFA+ PI N TK GR N+R+
Sbjct: 294 SALVNEYNIDPARLATQGFAWDQPIADNSTKEGRAMNRRV 333
>gi|146291559|ref|YP_001181983.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|145563249|gb|ABP74184.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
Length = 481
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 48/108 (44%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + + + P+L+++AT L + P+ + HTD G N +S+ RA
Sbjct: 369 TLEGLLFDYDSERMLPESKPVLEVLATYLKQNPALSFYVVGHTDDKGERSYNQSLSERRA 428
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L + + ++ G P+ +N G++ N+R+E+ +
Sbjct: 429 AAVIKQLNEAFNIPSVQLTAHGNGEYSPVASNANDTGQRLNRRVELVL 476
>gi|150390475|ref|YP_001320524.1| OmpA/MotB domain-containing protein [Alkaliphilus metalliredigens
QYMF]
gi|149950337|gb|ABR48865.1| OmpA/MotB domain protein [Alkaliphilus metalliredigens QYMF]
Length = 243
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 58/142 (40%), Gaps = 8/142 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL--NKF 106
E+ + I+V + ++ F L+ + + +L+ +A L +F
Sbjct: 93 VENYLDENGLASDILVLLESRGLILRFHDNILFDSGRAELKSRPMEILKDLAGFLDGEEF 152
Query: 107 PSTVIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ I ++ HTD+ + N +S RA + +LI+ + S G+
Sbjct: 153 QNKHIRVEGHTDTDPLRVTSKYETNWELSVARASNVVRFLIEDAGVTPERFSAAGYGEYR 212
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
P+ NDT + N+R+++ I
Sbjct: 213 PLAANDTIENKAINRRVDVVIL 234
>gi|330446544|ref|ZP_08310196.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490735|dbj|GAA04693.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 325
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 4/132 (3%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
A + + ++ + + + +P + L L +
Sbjct: 183 AAAPIVEPVYVDQVTITTLEE-LKLTVP---FAFDSSTITAGDAAKLAPFEQRLKDQGAA 238
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I + HTDS G+ N +S++RA + L Q I +G P+ +N T+
Sbjct: 239 QIYVIGHTDSRGSEAYNQKLSEKRAQAVADALRQHLNVGETRIIAQGRGESDPVASNQTE 298
Query: 170 VGRQNNQRIEIQ 181
GR N+R++I
Sbjct: 299 EGRAQNRRVDII 310
>gi|238896049|ref|YP_002920785.1| putative outer membrane lipoprotein [Klebsiella pneumoniae
NTUH-K2044]
gi|262043847|ref|ZP_06016937.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|238548367|dbj|BAH64718.1| iron-regulated membrane protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259038817|gb|EEW39998.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 160
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 63/183 (34%), Gaps = 27/183 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MI++ + ++ ++GC K E ++
Sbjct: 1 MIRKYFVPALMAAALLTGCQAPQG-------------------------KFTPEQVAAMK 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +A+ L T ++ HTD+
Sbjct: 36 SYGFT-ESNGDWSLGLSDSILFDKNDYRLRPDSRQQITTMASRLAATGITHSRLEGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+ + + + RG KYPI +NDT GR N+R+
Sbjct: 95 YGEDSYNEALSLKRANSVADAWAEGAHVPRSNLVTRGLGKKYPIASNDTAAGRAENRRVT 154
Query: 180 IQI 182
+ I
Sbjct: 155 VVI 157
>gi|188025753|ref|ZP_02959682.2| hypothetical protein PROSTU_01567 [Providencia stuartii ATCC 25827]
gi|188020355|gb|EDU58395.1| hypothetical protein PROSTU_01567 [Providencia stuartii ATCC 25827]
Length = 175
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 66/180 (36%), Gaps = 22/180 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ IM ++ C + N T G S ++ + +LQ+
Sbjct: 16 VLKGLMIALPIM-AVAACSSNKNNDQNGADSSMNQT-----NSGLSAEELARQQMQELQN 69
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + ++ ML A L PS + ++ H D
Sbjct: 70 NNI---------------VYFGFDKYNVSPEYADMLDAHAAFLRNNPSVKVVVEGHADER 114
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q + +S+ + + P T+ N+R I
Sbjct: 115 GTPEYNIALGERRANAV-KMYLQSKGVAGDQVSLVSYGKEKPAVLGHTEADYAKNRRAVI 173
>gi|171316577|ref|ZP_02905793.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171098305|gb|EDT43111.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 316
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 13/147 (8%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV------------SFVSEVFLEKKFLPM 95
+ + + +T I + + L + +
Sbjct: 169 EAQRQQLASDMANTLNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGRQI 228
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +A L+K + + I HTD+ G +N+ +SQ RAD +K YLI + + ++
Sbjct: 229 LDQMAAALSKLQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKS-IPPQQMTTT 287
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI NDT GR N+RIE ++
Sbjct: 288 GVGPDQPIAPNDTAEGRARNRRIEFRV 314
>gi|53720375|ref|YP_109361.1| OmpA family lipoprotein [Burkholderia pseudomallei K96243]
gi|53725632|ref|YP_103661.1| OmpA family outer membrane protein [Burkholderia mallei ATCC 23344]
gi|67643927|ref|ZP_00442670.1| outer membrane lipoprotein [Burkholderia mallei GB8 horse 4]
gi|76810557|ref|YP_334629.1| OmpA family outer membrane protein [Burkholderia pseudomallei
1710b]
gi|121601549|ref|YP_992166.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei SAVP1]
gi|124383503|ref|YP_001028612.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei NCTC 10229]
gi|126440722|ref|YP_001060216.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 668]
gi|126451181|ref|YP_001081487.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei NCTC 10247]
gi|126454443|ref|YP_001067480.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1106a]
gi|134280344|ref|ZP_01767055.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 305]
gi|166998277|ref|ZP_02264137.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei PRL-20]
gi|167720991|ref|ZP_02404227.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei DM98]
gi|167739948|ref|ZP_02412722.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 14]
gi|167817185|ref|ZP_02448865.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 91]
gi|167825598|ref|ZP_02457069.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 9]
gi|167847082|ref|ZP_02472590.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei B7210]
gi|167895666|ref|ZP_02483068.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 7894]
gi|167904059|ref|ZP_02491264.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei NCTC 13177]
gi|167912316|ref|ZP_02499407.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 112]
gi|167920273|ref|ZP_02507364.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei BCC215]
gi|217420588|ref|ZP_03452093.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 576]
gi|226194168|ref|ZP_03789767.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei Pakistan 9]
gi|237813606|ref|YP_002898057.1| outer membrane lipoprotein [Burkholderia pseudomallei MSHR346]
gi|242315175|ref|ZP_04814191.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1106b]
gi|254175608|ref|ZP_04882268.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei ATCC 10399]
gi|254180823|ref|ZP_04887421.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1655]
gi|254191661|ref|ZP_04898164.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei Pasteur 52237]
gi|254194825|ref|ZP_04901255.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei S13]
gi|254202358|ref|ZP_04908721.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei FMH]
gi|254207692|ref|ZP_04914042.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei JHU]
gi|254258391|ref|ZP_04949445.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1710a]
gi|254356406|ref|ZP_04972682.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei 2002721280]
gi|52210789|emb|CAH36773.1| putative OmpA family lipoprotein [Burkholderia pseudomallei K96243]
gi|52429055|gb|AAU49648.1| outer membrane protein, OmpA family [Burkholderia mallei ATCC
23344]
gi|76580010|gb|ABA49485.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1710b]
gi|121230359|gb|ABM52877.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei SAVP1]
gi|124291523|gb|ABN00792.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei NCTC 10229]
gi|126220215|gb|ABN83721.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 668]
gi|126228085|gb|ABN91625.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1106a]
gi|126244051|gb|ABO07144.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei NCTC 10247]
gi|134248351|gb|EBA48434.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 305]
gi|147746605|gb|EDK53682.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei FMH]
gi|147751586|gb|EDK58653.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei JHU]
gi|148025403|gb|EDK83557.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei 2002721280]
gi|157939332|gb|EDO95002.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei Pasteur 52237]
gi|160696652|gb|EDP86622.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei ATCC 10399]
gi|169651574|gb|EDS84267.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei S13]
gi|184211362|gb|EDU08405.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1655]
gi|217396000|gb|EEC36017.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 576]
gi|225933633|gb|EEH29621.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei Pakistan 9]
gi|237502905|gb|ACQ95223.1| outer membrane lipoprotein [Burkholderia pseudomallei MSHR346]
gi|238525396|gb|EEP88824.1| outer membrane lipoprotein [Burkholderia mallei GB8 horse 4]
gi|242138414|gb|EES24816.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1106b]
gi|243065357|gb|EES47543.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei PRL-20]
gi|254217080|gb|EET06464.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1710a]
Length = 170
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 62/184 (33%), Gaps = 21/184 (11%)
Query: 1 MIKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K+L L+ M ++ ++ C + + + T +
Sbjct: 2 MSKKLRLAFAMLMIGALAACKSGVKLDEHANQGDAVSTQPNPENVAQ------------- 48
Query: 59 QDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + D ++ ++ +LQ A L P I IQ +T
Sbjct: 49 ----VTVDPLNDPNSPLAKRSVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNT 104
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ + + + + P+ + N+R
Sbjct: 105 DERGTSEYNLALGQKRAEAVRR-ALSLLGVGDAQMEAVSLGKEKPVALGHDEASWAQNRR 163
Query: 178 IEIQ 181
++
Sbjct: 164 ADLV 167
>gi|227536270|ref|ZP_03966319.1| flagellar motor protein MotB [Sphingobacterium spiritivorum ATCC
33300]
gi|227243877|gb|EEI93892.1| flagellar motor protein MotB [Sphingobacterium spiritivorum ATCC
33300]
Length = 301
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 56/136 (41%), Gaps = 7/136 (5%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +++D + V + ++ + ++ + + K L IA I+ + + I
Sbjct: 145 REEMKD--VDVQVLKGVVYISLSDNMLYKSGSYEISDKAGETLSKIAKIIQDYKDYEVLI 202
Query: 114 QSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ +TD+ K NN +S RA + L + ++ G PI N T
Sbjct: 203 EGNTDTDPISKTNIRNNWDLSTLRASSVVQALQNTYGVDPKRLTAGGRGQYNPIADNSTA 262
Query: 170 VGRQNNQRIEIQIFPR 185
G+ N+R +I I P+
Sbjct: 263 AGKMKNRRTQIIITPK 278
>gi|42527497|ref|NP_972595.1| OmpA family protein [Treponema denticola ATCC 35405]
gi|41818082|gb|AAS12506.1| OmpA family protein [Treponema denticola ATCC 35405]
Length = 452
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 1/158 (0%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+ + + +K+ S + E + V++ +
Sbjct: 295 QGGLAQGTRSQEAASKKTSSQEIPLQKERPEIKPNKDFEVTKTKRGTMLRLKNLQFEPDR 354
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L K L IA IL K S ++ HT +G + ++SQERA + L++RG
Sbjct: 355 AVLLKGEEAKLDEIAKILKKSESEFFFVEGHTADVGKPEEEKILSQERAKTVIEKLVKRG 414
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + +FI +G PI N T+ GR N+R+EI I
Sbjct: 415 IPAEKFIY-QGAGGTKPISPNGTEEGRSQNRRVEITII 451
>gi|170698903|ref|ZP_02889963.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170136156|gb|EDT04424.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 247
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 13/147 (8%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV------------SFVSEVFLEKKFLPM 95
+ + + +T I + + L + +
Sbjct: 100 EAQRQQLASDMANTLNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGRQI 159
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +A L+K + + I HTD+ G +N+ +SQ RAD +K YLI + + ++
Sbjct: 160 LDQMAAALSKLQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKS-IPPQQMTTT 218
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI NDT GR N+RIE ++
Sbjct: 219 GVGPDQPIAPNDTAEGRARNRRIEFRV 245
>gi|146282902|ref|YP_001173055.1| flagellar motor protein MotD [Pseudomonas stutzeri A1501]
gi|145571107|gb|ABP80213.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501]
Length = 278
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 67/177 (37%), Gaps = 11/177 (6%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ----LQDTGIVVSRIGDMITCYIPV 78
+ V + + L++ + + + + + I +
Sbjct: 75 TTEPDVSQVEDLTGPASGEPTLDPLERIAQSMRETFGELIANDQLTIRGNELWIEIELSS 134
Query: 79 HVSFVSEVFL-EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQER 133
+ F S L + ++ +A IL F + ++ TD++ + N +S R
Sbjct: 135 SLLFPSGDALPNDQAFQLIDKVAGILAPF-DNPVHVEGFTDNLPISTDKFPTNWELSAAR 193
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + L +GV+ +R ++ G+ P+ N T GR N+R+ + + ++++
Sbjct: 194 AGSVVRMLAAQGVNPSR-LAAVGYGEFQPVADNATAEGRARNRRVVLVVSRNLDVRR 249
>gi|172059479|ref|YP_001807131.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171991996|gb|ACB62915.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 316
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 13/147 (8%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV------------SFVSEVFLEKKFLPM 95
+ + + +T I + + L + +
Sbjct: 169 EAQRQQLASDMANTLNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGRQI 228
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +A L+K + + I HTD+ G +N+ +SQ RAD +K YLI + + ++
Sbjct: 229 LDQMAAALSKLQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKS-IPPQQMTTT 287
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI NDT GR N+RIE ++
Sbjct: 288 GVGPDQPIAPNDTAEGRARNRRIEFRV 314
>gi|85712856|ref|ZP_01043898.1| OprF [Idiomarina baltica OS145]
gi|85693320|gb|EAQ31276.1| OprF [Idiomarina baltica OS145]
Length = 362
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 3/167 (1%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A+ + + D N S DK D + D + + + V
Sbjct: 191 AAAQPTETTPAPQQTMDSDNDGVIDSRDKCADTPRRYSVDADGCTMYENETVREQLLVEF 250
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F + K + + +A +N+ P + I HTD IG + N +SQ RA+ +K+
Sbjct: 251 DF-DSSQVRKDAMEPIAEMAEFMNEHPQLDLTIHGHTDKIGDAEYNQWLSQRRAESVKNV 309
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI--EIQIFPR 185
L++ S I+ G P D+ RQ N+RI E+++ R
Sbjct: 310 LVESYGISASRINTVGHGESQPKVKGDSPADRQENRRIEAELKVMTR 356
>gi|76817452|ref|YP_336363.1| hypothetical protein BURPS1710b_A1205 [Burkholderia pseudomallei
1710b]
gi|134278396|ref|ZP_01765110.1| ompA family protein [Burkholderia pseudomallei 305]
gi|167924203|ref|ZP_02511294.1| hypothetical protein BpseBC_36953 [Burkholderia pseudomallei
BCC215]
gi|217422136|ref|ZP_03453639.1| ompA family protein [Burkholderia pseudomallei 576]
gi|254185740|ref|ZP_04892258.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254263509|ref|ZP_04954374.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|76581925|gb|ABA51399.1| ompA family protein [Burkholderia pseudomallei 1710b]
gi|134250180|gb|EBA50260.1| ompA family protein [Burkholderia pseudomallei 305]
gi|157933426|gb|EDO89096.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|217394367|gb|EEC34386.1| ompA family protein [Burkholderia pseudomallei 576]
gi|254214511|gb|EET03896.1| ompA family protein [Burkholderia pseudomallei 1710a]
Length = 438
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V D + F + +++P+L +A LN+
Sbjct: 286 RVAKFLEPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNRVQ 345
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +TD +N +S+ERA + LI + I+ G P+
Sbjct: 346 G-NVRVSGYTDDTPVHTARFASNWDLSRERAQAV-RSLIAARLDRPERITAEGRGTLDPV 403
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
ND+ R N+R+EI +
Sbjct: 404 APNDSPANRARNRRVEITLM 423
>gi|226953967|ref|ZP_03824431.1| OmpA family outer membrane protein [Acinetobacter sp. ATCC 27244]
gi|226835321|gb|EEH67704.1| OmpA family outer membrane protein [Acinetobacter sp. ATCC 27244]
Length = 159
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 64/181 (35%), Gaps = 28/181 (15%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ + T++GC + L+ G
Sbjct: 7 KISFIALLCLTLAGCLS--------------------------FGPLKYRQVKMLKQEGF 40
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V++ G + + ++ ++ + + +A LNK+ + I HTD +G
Sbjct: 41 VLTDEGWSLGLP-ERLLFDFNKSDIKPEHATEIARLAKQLNKYDLQKLKIVGHTDDVGNP 99
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N +S+ERA + + ++V G P N ++ R +N+R+ + I
Sbjct: 100 EYNQKLSEERAQSVSMIFV-NEGFKQNNLTVIGRGSSQPYLPNTSEENRASNRRVAVIII 158
Query: 184 P 184
P
Sbjct: 159 P 159
>gi|149925997|ref|ZP_01914260.1| hypothetical protein LMED105_03075 [Limnobacter sp. MED105]
gi|149825285|gb|EDM84496.1| hypothetical protein LMED105_03075 [Limnobacter sp. MED105]
Length = 454
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 8/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFP 107
+ + + ++ + + +IG+ T + F L +P+++ +A L P
Sbjct: 315 ELPIQLREEIVAGLLTLKQIGNKSTVILTGDGLFNSGSAELNDSAIPLVEKVARKLALHP 374
Query: 108 STVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
I + +TD+ N +S ERA+ + + N I+ G PI
Sbjct: 375 G-QITVTGYTDNQPIRSIRFPSNWQLSAERAEHVGQRIATF--LPNTAIATEGAGAANPI 431
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
ND+ GR N+R+EI +
Sbjct: 432 APNDSAQGRARNRRVEIMLT 451
>gi|89075798|ref|ZP_01162186.1| putative peptidoglycan-associated lipoprotein [Photobacterium sp.
SKA34]
gi|90580128|ref|ZP_01235936.1| putative peptidoglycan-associated lipoprotein [Vibrio angustum S14]
gi|89048530|gb|EAR54105.1| putative peptidoglycan-associated lipoprotein [Photobacterium sp.
SKA34]
gi|90439013|gb|EAS64196.1| putative peptidoglycan-associated lipoprotein [Vibrio angustum S14]
Length = 180
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 63/182 (34%), Gaps = 9/182 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +MT ++ C S G+S D+
Sbjct: 6 ILKSLAIALPMMT-LAAC------SSTDSADSSAANQNGTNGGGTSPDQTIVTPVDPSGS 58
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + F ++ ++ +L+ A L PS + ++ H D
Sbjct: 59 MSEEQLLEQQLQQLRQEQTIFFKFDNSEIQPEYQAILEAHAAYLRDHPSIKVIVEGHADE 118
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N+ + + RA+ + YL +S+ + + P+ T N+R
Sbjct: 119 RGTPEYNIALGERRANAVAQYLQAL-GVPASQLSIVSYGEEKPLVLGHTDADYAKNRRAV 177
Query: 180 IQ 181
+
Sbjct: 178 LV 179
>gi|161504089|ref|YP_001571201.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|160865436|gb|ABX22059.1| hypothetical protein SARI_02187 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 174
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 64/181 (35%), Gaps = 13/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M ++ C K S + G + + +
Sbjct: 6 VLKGLMIALPVM-AVAACSS----NKNASNDGSEGGMLNGAGTGMDANGNGNMSSEEQAR 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + +++ + + + F ML A L PS + ++ H D
Sbjct: 61 LQMQQLQQNNIV-------YFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 113
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 114 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 172
Query: 181 Q 181
Sbjct: 173 V 173
>gi|238757126|ref|ZP_04618313.1| OmpA domain protein [Yersinia aldovae ATCC 35236]
gi|238704504|gb|EEP97034.1| OmpA domain protein [Yersinia aldovae ATCC 35236]
Length = 433
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL--PMLQLIATILNKFP 107
Q+ + + V + + + + L+ +L + +L
Sbjct: 285 QCAALLSQI-NHRVEVYKSIPAFSSAQMAPLFDSNSTKLKPNAQTNEILHSLLQLLEHNQ 343
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I I H+D+ G+ N+ IS++RA V++ +LI+ S+ +RG P+ +ND
Sbjct: 344 GSKILIVGHSDNTGSDSFNMTISEQRALVVRDWLIKNSSLSSENFIIRGMGSLEPVASND 403
Query: 168 TKVGRQNNQRIEIQIFPRGN 187
TK+G+ N+R+E+ + P+ +
Sbjct: 404 TKIGQDQNRRVEVLLLPKQD 423
>gi|300312990|ref|YP_003777082.1| signal peptide protein [Herbaspirillum seropedicae SmR1]
gi|124483422|emb|CAM32584.1| signal peptide protein [Herbaspirillum seropedicae]
gi|300075775|gb|ADJ65174.1| signal peptide protein [Herbaspirillum seropedicae SmR1]
Length = 203
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ L + L VI HTDSIG++ N +S RA+ +
Sbjct: 95 DAFFDFDKATLKPAGKAKLDELVGNLKAINLEVIIAVGHTDSIGSVAYNQKLSVRRAESV 154
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + + G P+ N T GR N+R+EI++
Sbjct: 155 KAYLVSK-GVEANRVYTEGKGKSQPVADNKTAAGRAKNRRVEIEVV 199
>gi|326773949|ref|ZP_08233231.1| hypothetical protein HMPREF0059_02355 [Actinomyces viscosus C505]
gi|326636088|gb|EGE36992.1| hypothetical protein HMPREF0059_02355 [Actinomyces viscosus C505]
Length = 505
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Query: 69 GDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNN 126
G IT + V+F L L+ +A L ++P + I HTD + N
Sbjct: 203 GKDITVTLASDVTFASDSADLAPGAEAQLKTVAGQLAQYPDGGTLTIVGHTDDVQDDAYN 262
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S++RA+ +K+ L Q SV G P + + R N+R+EI + P G
Sbjct: 263 QTLSEKRANAVKTRLAQLTTLDKWQTSVSGKGESEPKVKDTSDEARAVNRRVEITLTPTG 322
>gi|262274767|ref|ZP_06052578.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
101886]
gi|262221330|gb|EEY72644.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
101886]
Length = 309
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 73/184 (39%), Gaps = 11/184 (5%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED----EFQMQLQDTGIVVSRIGDM 71
+G + + S + ++ + + ++++ + V +G
Sbjct: 112 AGGAQRDSAELEGGSAASEASMQEMEQDTEQMSSVAQMVVQALEREVEEGAVEVENLGQQ 171
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNN 126
+ I + +F FL+ KF P+++ IA ++ P + + HTD ++N
Sbjct: 172 LIIRIRENGAFPAGSAFLQPKFRPLVRQIADLVKDVPGI-VRVSGHTDDSPLDSELYRSN 230
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S +RA + + + + V G A P NDT R N+R+EI I +G
Sbjct: 231 WDLSAQRAVSVAQEMEKVEGFDPMRMRVEGLAGSSPRVPNDTPENRAQNRRVEIAIM-QG 289
Query: 187 NIKK 190
++
Sbjct: 290 KARE 293
>gi|158424220|ref|YP_001525512.1| OmpA family protein [Azorhizobium caulinodans ORS 571]
gi|158331109|dbj|BAF88594.1| OmpA family protein [Azorhizobium caulinodans ORS 571]
Length = 494
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 6/136 (4%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ + Q I V G+ + + + L + ++ +A L KF + +
Sbjct: 361 LEPEQQAKLITVFGRGNSVVIQTQQELFASASTTLRPPYPEVIAKVAAALAKFKG-PVNV 419
Query: 114 QSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+TD++ S RA + L + R I+ G P+ +NDT
Sbjct: 420 LGYTDNVPIRTATFPDNLALSTARARAVGQALAAGLGGNAR-ITTVGKGDADPVASNDTP 478
Query: 170 VGRQNNQRIEIQIFPR 185
GRQ N+R+EI + P+
Sbjct: 479 DGRQKNRRVEIVLTPQ 494
>gi|17548982|ref|NP_522322.1| lipoprotein [Ralstonia solanacearum GMI1000]
gi|17431232|emb|CAD17912.1| putative outer membrane protein [Ralstonia solanacearum GMI1000]
Length = 277
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 63/160 (39%), Gaps = 3/160 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--S 81
+ +V +H + ++ S + + ++ + +
Sbjct: 116 DGTQVAVHGDVQNEAQRQQLASDMATTLGASYTIKNGLRVAAVSEQSLLDQTLANRIIEF 175
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L K +L +A +L + I I HTD+ G+ NL +SQ RA+ +K+YL
Sbjct: 176 ETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHTDNSGSRAMNLNLSQARAETVKNYL 235
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I + + ++ G P+ N T GR N+RIE +
Sbjct: 236 ISK-GAEPGTLTAIGVGPDQPVAPNATDEGRSRNRRIEFR 274
>gi|120597137|ref|YP_961711.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|120557230|gb|ABM23157.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
Length = 481
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 48/108 (44%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + + + P+L+++AT L + P+ + HTD G N +S+ RA
Sbjct: 369 TLEGLLFDYDSERMLPESKPVLEVLATYLKQNPALSFYVVGHTDDKGERSYNQSLSERRA 428
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L + + ++ G P+ +N G++ N+R+E+ +
Sbjct: 429 AAVIKQLNETFNIPSVQLTAHGNGEYSPVASNANDTGQRLNRRVELVL 476
>gi|224370727|ref|YP_002604891.1| MotB3 [Desulfobacterium autotrophicum HRM2]
gi|223693444|gb|ACN16727.1| MotB3 [Desulfobacterium autotrophicum HRM2]
Length = 272
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 69/199 (34%), Gaps = 17/199 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD--------KAED 52
M+ +F++ + G E K +SL+ +
Sbjct: 60 MM--TMFILFVVMYVYQAGSRELEFGPGPGTNLVSDSGSGKIVENSLNASPSDVFTQTRQ 117
Query: 53 EFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTV 110
+ D V + D + + + F + L+ + L+ I IL + S V
Sbjct: 118 AVLDEFVDDSASVELVADRAVRISLAGDLFFDLGKADLKPQAQWRLRQIGRILQEN-SFV 176
Query: 111 IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ + HTD + N +S RA + +LI+ V G A+ P+ N
Sbjct: 177 VNVIGHTDDMPNHSEQYPTNWELSTARACRVARFLIKEAQLPEERFFVSGHAWLQPLRPN 236
Query: 167 DTKVGRQNNQRIEIQIFPR 185
+T R N+R+EI +
Sbjct: 237 NTAHNRSLNRRVEIVLMKE 255
>gi|244538668|dbj|BAH82822.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 2/148 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ K+ + + G ++ IG T + H F ++ + +
Sbjct: 176 TPKAPQLATKQIEEKPQAKQIDKSCPEPRKGALLDHIGCEKTIMLEGHFGF-DQITINPE 234
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F +Q + +L + P ++ HTD+ G N +S ERA + +++ +
Sbjct: 235 FAQKIQEVGKVLEENPQYYTILEGHTDNTGPKAYNQKLSLERAKAVAKE-LEKAGVAKEK 293
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
I+ +G+ ++ PI +NDTK GR N+R+E
Sbjct: 294 ITTKGYGFEKPIASNDTKEGRAQNRRVE 321
>gi|254787123|ref|YP_003074552.1| flagellar motor protein MotB [Teredinibacter turnerae T7901]
gi|237687385|gb|ACR14649.1| putative chemotaxis protein MotB [Teredinibacter turnerae T7901]
Length = 329
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 6/147 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLI 99
++ + + Q++ + V G +I I SF L ++ ++ +
Sbjct: 139 QKTEQDAYELAEALNEQIEAGQVEVETRGRLIIIRIREKGSFVSGSAELAPEYRDVMGEV 198
Query: 100 ATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
++L P I +Q H+D+ G ++N +S RA + L+ G V
Sbjct: 199 RSVLTLKPG-RIEVQGHSDNIPVRRGRYRSNWELSAARAVSVAQELMSGGALPPNRFEVS 257
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
GFA P+ N T R N+R+EI I
Sbjct: 258 GFADTRPLVANTTPENRARNRRVEILI 284
>gi|304393653|ref|ZP_07375581.1| OmpA/MotB [Ahrensia sp. R2A130]
gi|303294660|gb|EFL89032.1| OmpA/MotB [Ahrensia sp. R2A130]
Length = 1102
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 52/137 (37%), Gaps = 6/137 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D E + + + + + F++ P+L + +K
Sbjct: 969 DTPEPASEEVSAACPVDFQQ-----ILRGKKILFDNNRAFIKASSYPLLDSLVDGFSKCS 1023
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I HTD++G NL +SQ RA + Y+ + GF PI N
Sbjct: 1024 DARVMISGHTDAVGRDAYNLSLSQSRAQAVLDYIAGK-GIDVDAFEAAGFGETKPIADNA 1082
Query: 168 TKVGRQNNQRIEIQIFP 184
T GR N+RI I++FP
Sbjct: 1083 TDTGRAANRRIVIEVFP 1099
>gi|156973901|ref|YP_001444808.1| hypothetical protein VIBHAR_01611 [Vibrio harveyi ATCC BAA-1116]
gi|156525495|gb|ABU70581.1| hypothetical protein VIBHAR_01611 [Vibrio harveyi ATCC BAA-1116]
Length = 173
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 69/181 (38%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M ++ C + +T + +D + +L++
Sbjct: 6 VLKGLLIAIPVM-AMTACSSSDDAASNTG--AETNTGASETTVVTPIDPNGQLTEQELKE 62
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A+ L+K P+ + I+ H D
Sbjct: 63 QALRETQT----------IYFAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADER 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +YL IS+ + + P+ ++ N+R +
Sbjct: 113 GTPEYNIALGERRAEAVSNYLQAL-GVQAEQISIVSYGEEKPLLLGQSEEVYAKNRRAVL 171
Query: 181 Q 181
Sbjct: 172 V 172
>gi|149909329|ref|ZP_01897985.1| sodium-driven polar flagellar protein MotB [Moritella sp. PE36]
gi|149807646|gb|EDM67594.1| sodium-driven polar flagellar protein MotB [Moritella sp. PE36]
Length = 290
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 11/176 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + + N V + + + + ++ G+ V +G I I
Sbjct: 110 GKSPETSTRDNTPTQNI--EVTEDTSELVKALAEALKEEIDSGGVEVENLGQQIIIRINE 167
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQER 133
SF FL+ +F P++Q +A +L P I I HT ++ +S +R
Sbjct: 168 KGSFPSGSAFLQPRFRPVIQKVAQLLATIPGI-ITIAGHTGKEQLHSELYRSKWDLSSQR 226
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
A + +++ + + V+G A P+ ++ ++ R N+R+EI I +G K
Sbjct: 227 AVSVAHEMLKVKEFTENRLIVQGMADTQPLTDDENELRR--NRRVEISIM-QGKAK 279
>gi|326392537|ref|ZP_08213903.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|325991422|gb|EGD50048.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200]
Length = 114
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSY 140
+ + +L I +L P+ I ++ TD + +N +S RA +
Sbjct: 1 SADVHPEEKDVLIKIGNMLKTLPN-HIRVEGFTDDLPMHNSKFDSNWELSVIRATNVVKI 59
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
L+ + IS G+ P+ ND++ R+ N+R++I I
Sbjct: 60 LVNEVGIEPQRISAVGYGEYRPVVPNDSEEHRRLNRRVDIVIMN 103
>gi|330807890|ref|YP_004352352.1| hypothetical protein PSEBR_a1170 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375998|gb|AEA67348.1| Conserved hypothetical protein; putative outer membrane protein,
putative OmpA family [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 370
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 3/165 (1%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K K + LD E + + +QD+ + + R +++ PV SF +
Sbjct: 117 GKDQETAKAVPMPDPKVTQAWLDDYEPKLRTAIQDSKLQLERRDNVLVVTAPVDGSFNPD 176
Query: 86 --VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L L +A IL P T + I H D+ G NL +SQERA + +
Sbjct: 177 RPAMLLPVTLGPFTRVAKILEADPKTAVLILGHADTSGAAPANLKLSQERAQSVAAIFRL 236
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
G+ +R + +RG P ND+ GR N+R+E+ + P +
Sbjct: 237 SGLQRDRLM-LRGMGAVAPRAANDSVEGRALNRRVELLVTPANTM 280
>gi|146329003|ref|YP_001209240.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
gi|146232473|gb|ABQ13451.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
Length = 202
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--PS 108
E Q + ++ T + L+ + +Q +A LN+
Sbjct: 58 EQPVVEQAPAQQVEQVLETEVKTFSA-DTYFDFDKSSLKPEGKAAIQQLAQELNQRGANV 116
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I + +TDS G+ N +S+ RA + +YLI+ I G + P+ +NDT
Sbjct: 117 RKITVIGNTDSKGSDAYNQKLSERRARAVSNYLIEN-GVPASIIEAYGNGERQPVASNDT 175
Query: 169 KVGRQNNQRIEIQI 182
+ GR N+R++I +
Sbjct: 176 EAGRAQNRRVDIAV 189
>gi|244538673|dbj|BAH82826.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
K + I K +DK+ E + G ++ IG T + H F
Sbjct: 174 NKTPKAPQLATNQIEEKPQAKQIDKSCPEPRK-----GALLDHIGCEKTIMLEGHFGF-D 227
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
++ + +F +Q + +L + P ++ HTD+ G N +S ERA + +++
Sbjct: 228 QITVNPEFAQKIQEVGKVLEENPQYYTILEGHTDNTGPKAYNQKLSLERAKAVAKE-LEK 286
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ I+ +G+ ++ PI +NDTK GR N+R+E
Sbjct: 287 AGVAKEKITTKGYGFEKPIASNDTKEGRAQNRRVE 321
>gi|126668392|ref|ZP_01739349.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
gi|126627101|gb|EAZ97741.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
Length = 189
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 58/181 (32%), Gaps = 4/181 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ +F + I+GC + D D
Sbjct: 8 KAIAMLFSVGLIAGCSSTGDPMEDADFGSDVSAVDQQGGSTVYSDGTRDGVSSAQLSDEE 67
Query: 64 VVSRIGDMITCYIPVH---VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
++ + + + +L A L+ PS ++ H D
Sbjct: 68 RMAAQQQSQQMALRDVTVFYFDFDTAEISAESRDVLVAHARYLSANPSMNARLEGHADDR 127
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + NL + + RA+ ++ +LI G S + ++ + + P + R N+R+E+
Sbjct: 128 GTSEYNLALGERRANAVQRFLIVNGASRGQLETIS-YGEEKPAVQGMSDSARSQNRRVEL 186
Query: 181 Q 181
Sbjct: 187 I 187
>gi|121610060|ref|YP_997867.1| OmpA/MotB domain-containing protein [Verminephrobacter eiseniae
EF01-2]
gi|121554700|gb|ABM58849.1| OmpA/MotB domain protein [Verminephrobacter eiseniae EF01-2]
Length = 242
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ + L + + + VI HTDS+GT N +S RA+ +
Sbjct: 132 DAFFDFDKSVIKPEGKAKLDDLVSKVKDINLEVIIAVGHTDSVGTDAYNQRLSVRRAEAV 191
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + + G K P+ N T GR N+R+EI++
Sbjct: 192 KAYLVSK-GIEKNRVYTEGKGEKQPVADNKTSEGRAKNRRVEIEVV 236
>gi|300772310|ref|ZP_07082180.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300760613|gb|EFK57439.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 301
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 56/136 (41%), Gaps = 7/136 (5%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +++D + V + ++ + ++ + + K L IA I+ + + I
Sbjct: 145 REEMKD--VDVQVLKGVVYISLSDNMLYKSGSYEISDKAGETLSKIAKIIQDYKDYEVLI 202
Query: 114 QSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ +TD+ K NN +S RA + L + ++ G PI N T
Sbjct: 203 EGNTDTDPISKTNIRNNWDLSTLRASSVVQALQNTYGVDPKRLTAGGRGQYNPIADNSTA 262
Query: 170 VGRQNNQRIEIQIFPR 185
G+ N+R +I I P+
Sbjct: 263 AGKMKNRRTQIIITPK 278
>gi|170754769|ref|YP_001781838.1| chemotaxis MotB protein [Clostridium botulinum B1 str. Okra]
gi|169119981|gb|ACA43817.1| putative chemotaxis MotB protein [Clostridium botulinum B1 str.
Okra]
Length = 254
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 74/216 (34%), Gaps = 36/216 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS------------------ 46
L L + + + K + + N
Sbjct: 23 LTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKAGSNVLQEGGGGGASVGKAGVSIVPS 82
Query: 47 --------LDKAEDEFQMQLQDTG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ + + + + +++ +G + V D + I V F + + K+
Sbjct: 83 DSMTEDIKMKEIKSKLEKEIEKSGYSDKVKVGVDADGLEIDIQDVVLFNSGDAEVLKQSS 142
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSN 149
+L I+ +L I + HTD+ ++N +S RA + ++L G S
Sbjct: 143 ALLTQISKMLKGL-DNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGISA 201
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S++ + P N T+ GR N+R+EI I +
Sbjct: 202 NKLSIQAYGEYMPKFDNATEAGRAKNRRVEISIVRK 237
>gi|325520557|gb|EGC99637.1| OmpA/MotB family outer membrane protein [Burkholderia sp. TJI49]
Length = 163
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 55/174 (31%), Gaps = 21/174 (12%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ + + GC A++ + + + ++ V L+
Sbjct: 9 VIAALALLGGCHHAAKTPENAGMAPAPSSETVATVTADDLNNPNSPLAK----------- 57
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
++ + +LQ A L P+ + IQ +TD GT + NL
Sbjct: 58 ---------RSVYFDFDSYSVKPDYQSLLQAHADYLRSHPARHVLIQGNTDERGTSEYNL 108
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + R+ + S ++ + + P+ + N+R ++
Sbjct: 109 ALGERRSQAVMS-ALETLGVPASQLEAVSLGKEKPVALGHDEDSWAQNRRADLV 161
>gi|257875985|ref|ZP_05655638.1| flagellar motor protein MotB [Enterococcus casseliflavus EC20]
gi|257810151|gb|EEV38971.1| flagellar motor protein MotB [Enterococcus casseliflavus EC20]
Length = 254
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 6/153 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLP 94
T + N++ D+ E V D + + + F +
Sbjct: 95 TQLENQQLEKISDQLSQELAASGLKEQTEVRLESDGLHITLASSILFASGSAEITDTTRQ 154
Query: 95 MLQLIATILNKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L L++ L K + I I HTD+ G ++N +S RA + Y I +G
Sbjct: 155 SLDLLSDSLKKLKANKIVIAGHTDNVPEKGNGRYQSNWDLSSARAITVMEYFISKGAVLE 214
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +++ FA P N+T GR N+R+E+ I
Sbjct: 215 KNAAIQAFADTEPKADNNTPQGRSENRRVEMII 247
>gi|167572001|ref|ZP_02364875.1| hypothetical protein BoklC_19324 [Burkholderia oklahomensis C6786]
Length = 439
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V D + F + +++P+L +A LNK
Sbjct: 287 RVAKFLEPEIAAGLVTVRDEADRSVIVLRGDGLFESGSTSVIDRYMPVLIRVADALNKVQ 346
Query: 108 STVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +TD +N +S+ERA+ + LI + I+ G P+
Sbjct: 347 G-SVRVSGYTDDAPVRTARFASNWDLSRERAEAV-RGLIAARLDRPDRITAEGRGTLDPV 404
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
ND+ R N+R+EI +
Sbjct: 405 APNDSPANRARNRRVEITLM 424
>gi|152980803|ref|YP_001354158.1| peptidoglycan-associated lipoprotein [Janthinobacterium sp.
Marseille]
gi|151280880|gb|ABR89290.1| peptidoglycan-associated lipoprotein [Janthinobacterium sp.
Marseille]
Length = 169
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 52/176 (29%), Gaps = 14/176 (7%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ ++ C + K ++ + + R +++ + D
Sbjct: 7 VFILSSALLMAACSSTKLDDKAPVEDRTGSSAAADPRSVGTVNASSDPLNDP-------- 58
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
++ +F +++ A L I IQ +TD G +
Sbjct: 59 -----QGVLAKRSIYFDFDSYIVKPEFQQVVENHAKYLKSNQGRKIIIQGNTDDRGGAEY 113
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL + Q+RA+ + + + + P + N+R +I
Sbjct: 114 NLALGQKRAEAV-RKSLSLLGVPETQMEAVSLGKEKPKALGSDEAAWAENRRADIV 168
>gi|86130870|ref|ZP_01049469.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85818281|gb|EAQ39441.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 326
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 41 KRFGSSLDKAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPML 96
+ + +D L + G+ V + + + + F S + +
Sbjct: 161 AAKDAKMRGLKDAISKALTDFEGKGLTVEQRDGKVYVSLENKLLFDSGSWTVGTNGTKAV 220
Query: 97 QLIATILNKFPSTVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ + ++L P + I+ HTD++ G L+ N +S +RA I + L Q +
Sbjct: 221 KQLGSVLADNPEIAVLIEGHTDNVPYGGSGNLQGNWDLSAKRATSIVNILRQNKRIDPKN 280
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ G P+ NDT + N+RIE+ + P+
Sbjct: 281 LTAAGRGEYAPVAENDTPENKAKNRRIEVILTPQ 314
>gi|110639902|ref|YP_680112.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110282583|gb|ABG60769.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 505
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
I +S++ + + + L LP L + T++N++P +I + HTD++G+
Sbjct: 384 IELSKLSSGTNILLHNVLFERTSYELLSSSLPALDQLVTVMNQYPGMIIELSGHTDNVGS 443
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K N+ +S+ R + K YL+ +G+S++R SV G+ KYP+ +ND + R+ N+R+E++I
Sbjct: 444 AKKNMELSKNRVESAKKYLVSKGISADRIKSV-GYGSKYPVASNDGEQTRKYNRRVELRI 502
Query: 183 F 183
Sbjct: 503 I 503
>gi|22126930|ref|NP_670353.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis KIM 10]
gi|45440865|ref|NP_992404.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis biovar Microtus str. 91001]
gi|108806600|ref|YP_650516.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Antiqua]
gi|108813033|ref|YP_648800.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Nepal516]
gi|145599836|ref|YP_001163912.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Pestoides F]
gi|149366875|ref|ZP_01888909.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis
CA88-4125]
gi|162418864|ref|YP_001605923.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Angola]
gi|165924580|ref|ZP_02220412.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165938361|ref|ZP_02226919.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011606|ref|ZP_02232504.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166211496|ref|ZP_02237531.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167400048|ref|ZP_02305566.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167419890|ref|ZP_02311643.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167424166|ref|ZP_02315919.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|218928293|ref|YP_002346168.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis CO92]
gi|229841062|ref|ZP_04461221.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229843166|ref|ZP_04463312.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis biovar Orientalis str. India 195]
gi|229894003|ref|ZP_04509189.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Pestoides A]
gi|229903473|ref|ZP_04518586.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Nepal516]
gi|270487253|ref|ZP_06204327.1| peptidoglycan-associated lipoprotein [Yersinia pestis KIM D27]
gi|294503130|ref|YP_003567192.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Z176003]
gi|21959969|gb|AAM86604.1|AE013906_8 peptidoglycan-associated lipoprotein [Yersinia pestis KIM 10]
gi|45435723|gb|AAS61281.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis biovar
Microtus str. 91001]
gi|108776681|gb|ABG19200.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Nepal516]
gi|108778513|gb|ABG12571.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Antiqua]
gi|115346904|emb|CAL19791.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis CO92]
gi|145211532|gb|ABP40939.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Pestoides
F]
gi|149291249|gb|EDM41324.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis
CA88-4125]
gi|162351679|gb|ABX85627.1| peptidoglycan-associated lipoprotein [Yersinia pestis Angola]
gi|165913739|gb|EDR32358.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165923640|gb|EDR40772.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165989554|gb|EDR41855.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166207267|gb|EDR51747.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166962631|gb|EDR58652.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167050756|gb|EDR62164.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167057015|gb|EDR66778.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229679243|gb|EEO75346.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Nepal516]
gi|229689513|gb|EEO81574.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis biovar Orientalis str. India 195]
gi|229697428|gb|EEO87475.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229703888|gb|EEO90901.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Pestoides A]
gi|262361166|gb|ACY57887.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis D106004]
gi|262365277|gb|ACY61834.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis D182038]
gi|270335757|gb|EFA46534.1| peptidoglycan-associated lipoprotein [Yersinia pestis KIM D27]
gi|294353589|gb|ADE63930.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Z176003]
gi|320014265|gb|ADV97836.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis biovar Medievalis str. Harbin 35]
Length = 168
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 57/181 (31%), Gaps = 19/181 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + ++ C + S ++ +LQ
Sbjct: 6 VLKGLMLALPV-LAVAACSSNKSANNDQSGMGAGTGTENGSNLSS--EEQARLQMQELQK 62
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + F ML A L PS + ++ H D
Sbjct: 63 NNI---------------VYFGFDKYDIGSDFAQMLDAHAAFLRSNPSDKVVVEGHADER 107
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + +Q S IS+ + + P + N+R +
Sbjct: 108 GTPEYNIALGERRASAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVL 166
Query: 181 Q 181
Sbjct: 167 V 167
>gi|325567537|ref|ZP_08144204.1| flagellar motor protein B [Enterococcus casseliflavus ATCC 12755]
gi|325158970|gb|EGC71116.1| flagellar motor protein B [Enterococcus casseliflavus ATCC 12755]
Length = 256
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 6/153 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLP 94
T + N++ D+ E V D + + + F +
Sbjct: 95 TQLENQQLEKISDQLSQELAASGLKDQTEVRLESDGLHITLASSILFASGSAEITDTTRQ 154
Query: 95 MLQLIATILNKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L L++ L K + I I HTD+ G ++N +S RA + Y I +G
Sbjct: 155 SLDLLSDSLKKLKANKIVIAGHTDNVPEKGNGRYQSNWDLSSARAITVMEYFISKGAVLE 214
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +++ FA P N+T GR N+R+E+ I
Sbjct: 215 KNAAIQAFADTEPKADNNTPQGRSENRRVEMII 247
>gi|66047081|ref|YP_236922.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|63257788|gb|AAY38884.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
Length = 386
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 199
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G N ISQERA + + +S RG
Sbjct: 200 TRLAKVVEGDQKTAVLILGHADTSGPTDANQKISQERAQSVAAIFRL-SGLERNRLSQRG 258
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 259 MGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 291
>gi|146307821|ref|YP_001188286.1| flagellar motor protein MotD [Pseudomonas mendocina ymp]
gi|145576022|gb|ABP85554.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 269
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 65/171 (38%), Gaps = 7/171 (4%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
+ + S D + S + F +Q + V I + + F S
Sbjct: 74 RTGEPENTSLDDPSADATLQSIASSVREAFGELIQSDQLTVRGNEMWIEIELSSSLLFPS 133
Query: 85 EVFL-EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKS 139
L + +++ +A IL + + + ++ TD++ N +S RA I
Sbjct: 134 GDALPNNQAFDIIEKVAKILAPYQN-PVKVEGFTDNLPIQTSQFPTNWELSSARAASIVR 192
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV +R ++ G+ PI N T GR N+R+ + I + ++
Sbjct: 193 MLAMDGVDPSR-LAAVGYGEFQPIADNATAEGRARNRRVVLVISRNLDTRR 242
>gi|104782672|ref|YP_609170.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
gi|95111659|emb|CAK16380.1| putative outer membrane protein; OmpA family [Pseudomonas
entomophila L48]
Length = 269
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + + + E L+ + L P V+ I+ +TDS G ++
Sbjct: 143 EQTDRGLVMTLGDVLFDTGEADLKNSASRTALKLVQFLQLNPRRVVRIEGYTDSTGNPED 202
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL +S++RA + L+ GV R I V G+ +YP++ N ++ GR N+R+EI
Sbjct: 203 NLKLSRDRAQAVADMLVDLGVDEKR-IQVEGYGDQYPVEANASERGRAQNRRVEIV 257
>gi|78065362|ref|YP_368131.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77966107|gb|ABB07487.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 170
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 66/185 (35%), Gaps = 22/185 (11%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+ L L++ +++ ++ C + K + T
Sbjct: 1 MMSNKARLALAVMMISALAACKSGVKLDDKANNAGAVSTQPSADNVAQ------------ 48
Query: 58 LQDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V + D ++ ++ P++Q A L P + IQ +
Sbjct: 49 -----VNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGN 103
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD GT + NL + Q+RA+ ++ + GV+ ++ +V + P + N+
Sbjct: 104 TDERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVS-LGKEKPQAAGHDEASWAQNR 162
Query: 177 RIEIQ 181
R ++
Sbjct: 163 RADLV 167
>gi|150388139|ref|YP_001318188.1| OmpA/MotB domain-containing protein [Alkaliphilus metalliredigens
QYMF]
gi|149948001|gb|ABR46529.1| OmpA/MotB domain protein [Alkaliphilus metalliredigens QYMF]
Length = 237
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 6/135 (4%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ + V + V F + + ++ +L + L + I
Sbjct: 103 LRENHLLDRVDVIEEERGLVIRFRDSVLFGSGQARISQEGYMLLDHVTAKLRTIDNA-IV 161
Query: 113 IQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I+ TD+I N N +S RA + Y+I ISV GF + PID+N+T
Sbjct: 162 IEGFTDNIPIQTNEFPSNWELSVARAIGVARYMIDEEYIEESRISVSGFGEQQPIDSNET 221
Query: 169 KVGRQNNQRIEIQIF 183
GR NN+RIEI I
Sbjct: 222 NEGRANNRRIEITIL 236
>gi|283782254|ref|YP_003373009.1| OmpA/MotB domain-containing protein [Pirellula staleyi DSM 6068]
gi|283440707|gb|ADB19149.1| OmpA/MotB domain protein [Pirellula staleyi DSM 6068]
Length = 282
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 7/170 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A E K T + A + +Q GI V + G +I +P
Sbjct: 110 TAKAEIDKQVQTLQASTRFRGGASIQANSSATNSLS-TVQIPGIDVRQDGSVIRIELPAD 168
Query: 80 VSFVSEVFLEK--KFLPMLQLIA-TILNKFPSTVIAIQSHTD--SIGTLKNNLLISQERA 134
FV+ L+ + ++ +A I+ +P I I+ HTD G L++ ++
Sbjct: 169 KLFVTGS-LQPTLEAQRIIDEVATAIIRSYPRQRIVIEGHTDNAQAGNPAGAHLLAYNQS 227
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ L+QR R +++ +P+ +N T+ GR N+RIEI ++P
Sbjct: 228 QAVFQQLVQRNSIPVRQLAIAAMGENHPLASNGTEQGRAKNRRIEIVVYP 277
>gi|78777594|ref|YP_393909.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
gi|78498134|gb|ABB44674.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
Length = 176
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 71/186 (38%), Gaps = 13/186 (6%)
Query: 2 IKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K + L+ + + +SGCG ++ + + + SS+
Sbjct: 1 MKSIVLASAVAALLVLSGCG--DKDPQVDANDGAVAEQAAPAKSASSVKAPTSSNTETAA 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF-PSTVIAIQSHTD 118
+ + + + + ++ L A++ + ++ + D
Sbjct: 59 EYMARIEKE-------LKTIYFDFDKFNIKADMQANLSTDASVAKSSASKFQLKLEGNCD 111
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ + N + +RA+ +K L+ GV +NR IS+ F P T+ TK N+R+
Sbjct: 112 EWGSDEYNFALGLKRAESVKKALVAEGVDANR-ISMVSFGESNPTCTDKTKECWAENRRV 170
Query: 179 EIQIFP 184
+ ++ P
Sbjct: 171 DFKLLP 176
>gi|148359324|ref|YP_001250531.1| flagellar motor protein MotB [Legionella pneumophila str. Corby]
gi|296107371|ref|YP_003619071.1| flagellar motor protein [Legionella pneumophila 2300/99 Alcoy]
gi|148281097|gb|ABQ55185.1| flagellar motor protein MotB [Legionella pneumophila str. Corby]
gi|295649272|gb|ADG25119.1| flagellar motor protein [Legionella pneumophila 2300/99 Alcoy]
Length = 267
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 9/177 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--EFQMQLQDTGIVVSRIGDMITCYIP- 77
+ K D K G+ D ++ + +L+D ++R + I
Sbjct: 60 KDQNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKA 119
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQER 133
+ ++ + L L +A + P + ++ +TD+ +N +S R
Sbjct: 120 GSLFDSGSADIKPEALIKLMKLAEKIKNLP-FTVVVEGYTDNVPIETPQYPSNWELSAAR 178
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + ++ +N I V G+ +YPI N T+ GR N+R+ I I + +
Sbjct: 179 AATVGR-ILNGFGIANHRILVTGYGDQYPITDNYTEAGRSQNRRVNILIAKNRKVDR 234
>gi|21223388|ref|NP_629167.1| secreted protein [Streptomyces coelicolor A3(2)]
gi|8218177|emb|CAB92608.1| putative secreted protein [Streptomyces coelicolor A3(2)]
Length = 203
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 72/187 (38%), Gaps = 11/187 (5%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV--NKRFGSSLDKAEDEFQMQLQDTG 62
L S+ ++ + + ++ V N D A L
Sbjct: 10 LTTSVLTAASVGVSQSYAADDPPGTEPSASAPVEVDPNDPDLKLPDGATLAQAKVLDIKS 69
Query: 63 IVVSRIGDM--------ITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+V + GD +T + V F L + ++ IA + +T + +
Sbjct: 70 VVEEQSGDERREDTNTSVTLALQAEVLFGKDSSKLGAEAKSRIRGIADEIRTQNATRVRV 129
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
TD +G+ + ++S+ RA+ + L Q + VRG+ +YPI N T+ GR+
Sbjct: 130 FGFTDDLGSSAHGDVLSKRRANAVHDVLSQSLNDAGITYEVRGYGEQYPIADNSTEAGRK 189
Query: 174 NNQRIEI 180
N+R+E+
Sbjct: 190 KNRRVEV 196
>gi|86144391|ref|ZP_01062723.1| Outer membrane protein [Vibrio sp. MED222]
gi|85837290|gb|EAQ55402.1| Outer membrane protein [Vibrio sp. MED222]
Length = 353
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L + L + +L P + + + HTDS G + N++IS++RA
Sbjct: 227 SFSQGMFETNSTELSSEGKSALMPLVEVLQAHPQSSVNVVGHTDSTGAAEYNMMISKKRA 286
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + I+ I+ G + P+ +N T GR N+R++ I
Sbjct: 287 AAVAA-YIEEQGIEADRITASGEGEENPVASNATAEGRAQNRRVDATI 333
>gi|167463460|ref|ZP_02328549.1| flagellar motor protein MotB [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 258
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 9/170 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ +K K + D + K L + + + I V ++ +
Sbjct: 89 TDKKTKERQAAAADMERKEKELQDILKTVQAYIEENHLEAQIAVGNSERGVSVTLKDLFL 148
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-----KNNLLISQERAD 135
F + L+ + P+L +A++ T I+I+ HTD+I ++N +S R+
Sbjct: 149 FDLGKAELKPEAYPVLNKLASLFPTL-DTKISIEGHTDNIPVRTGSPFQDNWGLSNARSL 207
Query: 136 VIKSYLIQR--GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ Y + S+ G+A P+ ND+ R N+R+EI I
Sbjct: 208 SVLRYFTTKADPKISDSKFMSTGYADTIPVAPNDSMENRAKNRRVEIVIL 257
>gi|289523562|ref|ZP_06440416.1| flagellar motor protein MotB [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503254|gb|EFD24418.1| flagellar motor protein MotB [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 239
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 71/184 (38%), Gaps = 11/184 (5%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD----TGIVVS 66
+ + G ++ + + + K + L+ + V
Sbjct: 55 AIGVLPGGVTTIPGEETMQGAQLTGPGQEMTLNAEQVKKVHEMMVQLLESENLMNEVTVR 114
Query: 67 RIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IG 121
I I + F S L ++ IA I+N P+ I+++ HTD+ G
Sbjct: 115 IEERGIVISIIDGLLFQSGSVELIPPARRLIYKIAQIINDLPN-QISVEGHTDNVPLNRG 173
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++N +S RA V+ SYL++ + + G+ P+ NDT+ R+ N+R++I
Sbjct: 174 PYRDNWGLSAMRAAVVGSYLVEA-GIDPKRLRTVGYGQSRPLVPNDTEEHRRINRRVDIV 232
Query: 182 IFPR 185
I
Sbjct: 233 ILNN 236
>gi|90415361|ref|ZP_01223295.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
gi|90332684|gb|EAS47854.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
Length = 399
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 61/175 (34%), Gaps = 14/175 (8%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE-------FQMQLQDTGIVVSRIGDMIT 73
AS E+ S+ +D+ + + V R GD I
Sbjct: 223 ASGEQSGGLESDSDSNQSSGGSADQRRQDIDDKYQQIRLSLAADINNGLAEVERDGDKII 282
Query: 74 CYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ SF L+ F +L + L+ + ++ HTD+I + S
Sbjct: 283 VRLASQGSFVSGSSNLQPGFTGLLTRVGNSLSVTSG-KVRVEGHTDNIPVAFSERFNSNW 341
Query: 133 RAD-----VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + I+V GFA PID+N+T GR N+RIE+ +
Sbjct: 342 DLSAARSASVADFFADNSELDQSAITVAGFADTRPIDSNNTAAGRARNRRIEVIV 396
>gi|288942520|ref|YP_003444760.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
180]
gi|288897892|gb|ADC63728.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
Length = 279
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPM 95
D + + + E + ++ + I ++ I D + I SF S ++ F
Sbjct: 108 DPAVEDAQDKAEDLKQELKKEIAEGLIEINTIDDQVVIRIREKGSFPSASARIDTPFKAA 167
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRF 151
L IA LN+ I I HTD + +N ++S RA + + Q G +
Sbjct: 168 LMKIAEALNQVEG-RILIAGHTDDVPIETLEFPSNWVLSAARAAAVAHTMTQVGGIAPER 226
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +R P+DTN+T GR NN+R+EI +
Sbjct: 227 VEIRAHGDNRPVDTNETTDGRANNRRVEIIVL 258
>gi|167899688|ref|ZP_02487089.1| hypothetical protein Bpse7_38555 [Burkholderia pseudomallei 7894]
Length = 407
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V D + F + +++P+L +A LN+
Sbjct: 255 RVAKFLEPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNRVQ 314
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +TD +N +S+ERA + LI + I+ G P+
Sbjct: 315 G-NVRVSGYTDDTPVHTARFASNWDLSRERAQAV-RSLIAARLDRPERITAEGRGTLDPV 372
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
ND+ R N+R+EI +
Sbjct: 373 APNDSPANRARNRRVEITLM 392
>gi|170701074|ref|ZP_02892051.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
IOP40-10]
gi|172059753|ref|YP_001807405.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
MC40-6]
gi|170134014|gb|EDT02365.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
IOP40-10]
gi|171992270|gb|ACB63189.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
MC40-6]
Length = 169
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 66/184 (35%), Gaps = 21/184 (11%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+ L L++ +++ ++ C + K + + ++D
Sbjct: 1 MMSNKARLALAVMMISALAACKSGVKLDDKANAGAVSTQPSADNVAQVNVDPL------- 53
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
++ ++ P++Q A L P + IQ +T
Sbjct: 54 ----------NDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNT 103
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ + GV+ ++ +V + P + + N+R
Sbjct: 104 DERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVS-LGKEKPQASGHDEASWAQNRR 162
Query: 178 IEIQ 181
++
Sbjct: 163 ADLV 166
>gi|306820525|ref|ZP_07454158.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551439|gb|EFM39397.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 437
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQ-MQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
D + + + E+ + +L V + I + V F ++
Sbjct: 282 GQGKADITLNGESITVDAEPLENPGRLPKLSPVPAVPPIEANSIMIKLDSGVLFDVNKYN 341
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
+ +L + +L K I HTDS T + N ++S+ RA+ +K +L++ G++
Sbjct: 342 IRADANDVLMKLIDVLKKGKIQKFEIYGHTDSDDTDEYNQVLSENRANSVKDFLVKNGIT 401
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ I+ +GF K PI TN TK G+Q N+R+EI I
Sbjct: 402 AD--ITTKGFGEKKPIATNSTKEGKQLNRRVEIII 434
>gi|126643008|ref|YP_001085992.1| putative lipoprotein precursor [Acinetobacter baumannii ATCC 17978]
gi|184159508|ref|YP_001847847.1| outer membrane protein [Acinetobacter baumannii ACICU]
gi|183211102|gb|ACC58500.1| Outer membrane protein [Acinetobacter baumannii ACICU]
Length = 126
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L+ G V++ G + + ++ L++ L +A LNK+ + I HT
Sbjct: 2 LKKEGFVLTNEGWTLGLP-ERLLFDFNDATLKQSHEAELTRLANQLNKYDLNKLKIVGHT 60
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D +G + N +S+ERA + + + I V G P N T R N+R
Sbjct: 61 DDVGNPEYNQKLSEERAQSVANLFLT-HGFKKENIYVIGRGSTQPYVPNTTNENRAINRR 119
Query: 178 IEIQIFP 184
+ I I P
Sbjct: 120 VAIVIIP 126
>gi|114763456|ref|ZP_01442863.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601]
gi|114543994|gb|EAU47005.1| OmpA domain protein [Roseovarius sp. HTCC2601]
Length = 637
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 61/177 (34%), Gaps = 1/177 (0%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
+S G + + + +++ L +
Sbjct: 434 LVSLSGNTGNPDAEDEISGLLADKLGEAGEFEISVTYQEKLDPTLGIPTPEECEAQIVEI 493
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
L+ ++ IA +L + IQ HTDS G N +SQ+R
Sbjct: 494 IGDRKINFEPGSANLDASAKDVMDDIAELLKLCGDIPLEIQGHTDSQGRESMNEQLSQDR 553
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + L R V + + V+G+ PI N T+ GR+ N+RI ++ +++
Sbjct: 554 AQAVLDALRNRRVLTASY-RVKGYGEMQPIADNGTEEGREANRRIAFRLIRPEPVEE 609
>gi|115350730|ref|YP_772569.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115280718|gb|ABI86235.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 169
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 66/184 (35%), Gaps = 21/184 (11%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+ L L++ +++ ++ C + K + + ++D
Sbjct: 1 MMSNKARLALAVMMISALAACKSGVKLDDKTNAGAVSTQPSADNVAQVNVDPL------- 53
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
++ ++ P++Q A L P + IQ +T
Sbjct: 54 ----------NDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNT 103
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ + GV+ ++ +V + P + + N+R
Sbjct: 104 DERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVS-LGKEKPQASGHDEASWAQNRR 162
Query: 178 IEIQ 181
++
Sbjct: 163 ADLV 166
>gi|303239756|ref|ZP_07326280.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
gi|302592693|gb|EFL62417.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
Length = 277
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 68/174 (39%), Gaps = 10/174 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDMITC 74
++ + T + + + +D + ++ + G I + + +
Sbjct: 78 SSVGTSEENSNDITVSTTKSNETKEDEKMKEIKDNIEKEISEEGYSNNIKLVLDSEGLEI 137
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
I V F E ++K+ P+L + I+ + I + HTD++ + N +
Sbjct: 138 SIQDVVLFNTGEADIKKEVYPLLLKLTGIIKGLNN-SIKVVGHTDNVPIHNDKFRSNWDL 196
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S RA + S++ +G S++ P N T+ GR N+R+EI I
Sbjct: 197 SSFRAINVMSFMRDQGKLRPEKFSIQACGEFKPKYDNSTEEGRAKNRRVEIYIV 250
>gi|291558208|emb|CBL35325.1| Flagellar motor protein [Eubacterium siraeum V10Sc8a]
Length = 339
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 52/171 (30%), Gaps = 7/171 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDMITCY 75
+ T + S ++ + + + + I
Sbjct: 74 TNGNAEAPPNTQNGGTTSEQTEGLPSDFNQLYSFLKTTTDKNDLGQYVYIEQTPTRIFIR 133
Query: 76 IPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQE 132
+ F L+++ +L + ++ HT + N+ +S
Sbjct: 134 FNNTIMFDGNSAVLKEEGKQVLNKFMPGIKAVNKYIKSCSVSGHTAKAVSDVNDWDLSAA 193
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + Y+ + +V G A PI N T GR N+R+EI I
Sbjct: 194 RASSVVKYMDYNRCVDSEKFTVEGKACYTPIADNSTAEGRAANRRVEIMIV 244
>gi|254255311|ref|ZP_04948627.1| Outer membrane protein [Burkholderia dolosa AUO158]
gi|124901048|gb|EAY71798.1| Outer membrane protein [Burkholderia dolosa AUO158]
Length = 232
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ L ++ +AI +TDS GT ++N +S+ RA
Sbjct: 127 SDANFDTDRATLKPDARDRLDVLIDAARGTTFQTVAIAGYTDSTGTAEHNQRLSERRAQA 186
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL + + VRG+ P+ TN T GR N+R++I +
Sbjct: 187 VAQYLRE-HGLRAQKFDVRGYGESNPVATNTTAAGRAKNRRVDITL 231
>gi|310765213|gb|ADP10163.1| OmpA family protein [Erwinia sp. Ejp617]
Length = 413
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 56/139 (40%), Gaps = 7/139 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPS 108
+ + +++ +VV D + F S + ++ +L +A +N
Sbjct: 260 LKTFLKPEIEQGLVVVRDEADRSVVTLKGDGLFTSASTDVRGRYAEVLDRVAAAMNNVSG 319
Query: 109 TVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I + ++D++ +N +S RA + +Q+ ++ + + G P+
Sbjct: 320 -RILVVGYSDNVPIRSARFASNYELSLARAQSVSEQ-LQQHLTQPQRVKAEGRGDSNPLA 377
Query: 165 TNDTKVGRQNNQRIEIQIF 183
N++ R N+R+EI +
Sbjct: 378 PNNSAGNRARNRRVEITLL 396
>gi|186470894|ref|YP_001862212.1| type VI secretion system OmpA/MotB family protein [Burkholderia
phymatum STM815]
gi|184197203|gb|ACC75166.1| type VI secretion system OmpA/MotB family protein [Burkholderia
phymatum STM815]
Length = 447
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 68/192 (35%), Gaps = 22/192 (11%)
Query: 5 LGLSMFIMTTISGC---------GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+ +++ + + GC G ++ +K++ + +
Sbjct: 258 ITVTLLSVILL-GCFGWFKYELLGRSAEVQKQIADIGHMTPPPAPPVL-----HLKALLK 311
Query: 56 MQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ + V + + ++ P++ IA + + P +++
Sbjct: 312 DEIAAGTVSVDEDAHHSSVTFRGDSMFPPGGASVKATMGPLIAKIAAEIARVPG-KVSVL 370
Query: 115 SHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+TD++ S+ERA + L GV ++R + G P+ N T
Sbjct: 371 GYTDNVPIRSRQFASNDALSEERATQVMQILQAAGVPASR-LEAVGKGDADPVADNSTPQ 429
Query: 171 GRQNNQRIEIQI 182
GR N+R+EI +
Sbjct: 430 GRAQNRRVEITV 441
>gi|294670063|ref|ZP_06735018.1| OmpA family protein [Neisseria elongata subsp. glycolytica ATCC
29315]
gi|291308146|gb|EFE49389.1| OmpA family protein [Neisseria elongata subsp. glycolytica ATCC
29315]
Length = 162
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPST 109
++ + L +TG+ V R G+ I +P +V+F + L L A L ++ T
Sbjct: 16 REKLRESLANTGVDVERNGNQIKLVMPENVTFPTNSSTLNANAQNALAAAAQTLTQYHDT 75
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ I HTD+ G+ N +SQ RA + SYL RGVS++R ++ G + PI +N T
Sbjct: 76 TLTINGHTDNTGSDAINDPLSQRRAQAVASYLQSRGVSASRM-NIFGHGSRQPIASNATV 134
Query: 170 VGRQNNQRIEIQIFPRGN 187
GR N+R+EI I P N
Sbjct: 135 EGRAQNRRVEILINPDQN 152
>gi|259907293|ref|YP_002647649.1| hypothetical protein EpC_06170 [Erwinia pyrifoliae Ep1/96]
gi|224962915|emb|CAX54396.1| Type VI secretion system, OmpA/MotB [Erwinia pyrifoliae Ep1/96]
gi|283477112|emb|CAY73012.1| putative type VI secretion system, core protein [Erwinia pyrifoliae
DSM 12163]
Length = 413
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 56/139 (40%), Gaps = 7/139 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPS 108
+ + +++ +VV D + F S + ++ +L +A +N
Sbjct: 260 LKTFLKPEIEQGLVVVRDEADRSVVTLKGDGLFTSASTDVRGRYAEVLDRVAAAMNNVSG 319
Query: 109 TVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I + ++D++ +N +S RA + +Q+ ++ + + G P+
Sbjct: 320 -RILVVGYSDNVPIRSARFASNYELSLARAQSVSEQ-LQQHLTQPQRVKAEGRGDSNPLA 377
Query: 165 TNDTKVGRQNNQRIEIQIF 183
N++ R N+R+EI +
Sbjct: 378 PNNSAGNRARNRRVEITLL 396
>gi|188590401|ref|YP_001920214.1| chemotaxis protein MotB [Clostridium botulinum E3 str. Alaska E43]
gi|251779316|ref|ZP_04822236.1| chemotaxis protein MotB [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|188500682|gb|ACD53818.1| chemotaxis protein MotB [Clostridium botulinum E3 str. Alaska E43]
gi|243083631|gb|EES49521.1| chemotaxis protein MotB [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 247
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 65/159 (40%), Gaps = 6/159 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
D + + ++ + + + + + + V F + L +
Sbjct: 90 DAQSLGKENMYKDIKNYVEKNNLSGSMDIIQDERGVILELKDSVLFESGQADLIPGSKEV 149
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L + T+++ P++VI ++ HTD++ +N +S +RA + Y ++ +
Sbjct: 150 LDKVDTLVSALPNSVI-VEGHTDNVPISNYRYASNWELSTQRAVNVVKYFVETKSNDPMK 208
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
S G+ PI N+++ R N+R+ I I + ++
Sbjct: 209 FSAAGYGEYRPIVYNNSEENRAKNRRVNILIINEKDNEE 247
>gi|26246711|ref|NP_752751.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli CFT073]
gi|91209776|ref|YP_539762.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli UTI89]
gi|237707296|ref|ZP_04537777.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
sp. 3_2_53FAA]
gi|331645892|ref|ZP_08346995.1| peptidoglycan-associated lipoprotein [Escherichia coli M605]
gi|26107110|gb|AAN79294.1|AE016757_198 Peptidoglycan-associated lipoprotein precursor [Escherichia coli
CFT073]
gi|91071350|gb|ABE06231.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli
UTI89]
gi|226898506|gb|EEH84765.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
sp. 3_2_53FAA]
gi|331044644|gb|EGI16771.1| peptidoglycan-associated lipoprotein [Escherichia coli M605]
Length = 181
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C ++ G + + Q
Sbjct: 14 VLKGLMIALPVM-AIAACSSNKNASNDGSE------GMLGAGTGMDANGGNGNMSSEEQA 66
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + I + + + F ML A L PS + ++ H D
Sbjct: 67 RLQMQQLQQNNIV------YFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER 120
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 121 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 179
Query: 181 Q 181
Sbjct: 180 V 180
>gi|229837675|ref|ZP_04457837.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A]
gi|229704363|gb|EEO91374.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A]
Length = 513
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L ML + P +I + HTD G + N ++S +RA+ ++
Sbjct: 381 SLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALR 440
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+++ S +V+G+ PI NDT GR N+R+EI + P+ +
Sbjct: 441 DWMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRVLNRRVEISLVPQAD 489
>gi|237716264|ref|ZP_04546745.1| outer membrane protein [Bacteroides sp. D1]
gi|294807688|ref|ZP_06766481.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
gi|229443911|gb|EEO49702.1| outer membrane protein [Bacteroides sp. D1]
gi|294445124|gb|EFG13798.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
Length = 238
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 71/181 (39%), Gaps = 14/181 (7%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI- 72
+ G + + G +DKA E + ++ + + +
Sbjct: 43 ILGGVIGKGKGAAIGAAIGTAVGAGTGALIGKKMDKAAAEAKQ-IEGAQVEQITDNNGLQ 101
Query: 73 --TCYIPVHVSFV-SEVFLEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL----- 123
+ F L L A LN+ ++I +TD+ G
Sbjct: 102 AVKVTFDSGILFTTGNANLSAAAKSALSKFANNVLNQNRDMDVSIYGYTDNQGWKNSTAA 161
Query: 124 ---KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL +SQERA + SYL+ GVS+N+ SV+G P+ +NDT GR+ N+R+E+
Sbjct: 162 QSQQKNLNLSQERAQSVSSYLLSCGVSTNQIKSVQGMGESDPVASNDTAAGREQNRRVEV 221
Query: 181 Q 181
Sbjct: 222 Y 222
>gi|323497295|ref|ZP_08102314.1| OmpA family protein [Vibrio sinaloensis DSM 21326]
gi|323317652|gb|EGA70644.1| OmpA family protein [Vibrio sinaloensis DSM 21326]
Length = 205
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 75/204 (36%), Gaps = 25/204 (12%)
Query: 2 IKELGLSMFIMTTISGCG---------------LASREKKKVFLHK-SNDTDIVNKRFGS 45
+K L L ++ +SGC A + +V + ND +
Sbjct: 1 MKYLTL--PLIILLSGCTNMAQDIANMTEDMLDTAPKTDFEVRYPEWGNDPKVAQSGVEG 58
Query: 46 SLDKAED----EFQMQLQDTGIVVSRI-GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ + + Q L G+ + G+ I + + F + L ++
Sbjct: 59 PMGQTRAPYYKDLQSFLLKNGVDYEVLPGNHIMVKLKDTIKFNTGSSQVMPDSAYWLDMM 118
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
L+ P I I H DS G N +S +RA +K L++ V+ + + RG+
Sbjct: 119 GEYLSTQPGIDIVIDGHADSTGAPSFNDSLSMKRAKAVKQQLVRNNVAMDSIFT-RGYGE 177
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF 183
P +N + G+ N+R+E+
Sbjct: 178 FVPACSNASMAGKACNRRVEVLFI 201
>gi|295134908|ref|YP_003585584.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda
SM-A87]
gi|294982923|gb|ADF53388.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda
SM-A87]
Length = 281
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 5/133 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ D I ++ ++ I + F + + +L +AT++ P ++ H
Sbjct: 129 MNDDDIEINVEKGVVYVSISDKLLFDSGRYNVTNQAREVLGKVATVIKNKPDIEFMVEGH 188
Query: 117 TD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD S ++N +S +RA + L + ++ G +Y P+ +N T GR
Sbjct: 189 TDDKSISTSMFQDNWDLSVKRATSVVRILQDEFGVDPKRMTAAGRSYYMPVASNATAEGR 248
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 249 AKNRRTRIVVLPK 261
>gi|311992350|gb|ADQ26748.1| flagellar stator protein [Aeromonas hydrophila]
Length = 291
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIAT 101
+ K E + + Q++ + V ++G + I F FL+ +F+P++ I+
Sbjct: 133 VQVTKKKLEQQLKAQIESKDLEVEQLGSQLVIRIGEKALFPADSAFLQPQFIPLVNKISG 192
Query: 102 ILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IL P + + HTD+ ++N +S R+ I L+ + +G
Sbjct: 193 ILADIPG-KVVVTGHTDNSQAPVELYRSNWELSVLRSASIVHTLLTNPKLDATRVIAQGV 251
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
A P NDT RQ N+R+EI +
Sbjct: 252 ADAQPRYPNDTAEHRQANRRVEITL 276
>gi|291532054|emb|CBK97639.1| Flagellar motor protein [Eubacterium siraeum 70/3]
Length = 339
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 51/171 (29%), Gaps = 7/171 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDMITCY 75
+ T + S ++ + + + + I
Sbjct: 74 TNGNAEAPPNTQNGGTTSEQTEGLPSDFNQLYSFLKTTTDKNDLGQYVYIEQTPTRIFIR 133
Query: 76 IPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQE 132
+ F L+++ +L + + HT + N+ +S
Sbjct: 134 FNNTIMFDGNSAVLKEEGKQVLNKFMPGIKAVNKYIKSCEVSGHTAKAVSDVNDWDLSAA 193
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + Y+ + +V G A PI N T GR N+R+EI I
Sbjct: 194 RASSVVKYMDYNRCVDSEKFTVEGKACYTPIADNSTAEGRATNRRVEIMIV 244
>gi|269963139|ref|ZP_06177474.1| peptidoglycan-associated lipoprotein [Vibrio harveyi 1DA3]
gi|269832103|gb|EEZ86227.1| peptidoglycan-associated lipoprotein [Vibrio harveyi 1DA3]
Length = 173
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 69/181 (38%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M ++ C + +T + +D + +L++
Sbjct: 6 VLKGLLIAIPVM-AMTACSSSDDAASNTG--AETNTGAAETTVVTPIDPNSQLTEQELKE 62
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A+ L+K P+ + I+ H D
Sbjct: 63 QALRETQT----------IYFAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADER 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +YL IS+ + + P+ ++ N+R +
Sbjct: 113 GTPEYNIALGERRAEAVSNYLQAL-GVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAVL 171
Query: 181 Q 181
Sbjct: 172 V 172
>gi|167750717|ref|ZP_02422844.1| hypothetical protein EUBSIR_01695 [Eubacterium siraeum DSM 15702]
gi|167656396|gb|EDS00526.1| hypothetical protein EUBSIR_01695 [Eubacterium siraeum DSM 15702]
Length = 339
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 52/171 (30%), Gaps = 7/171 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDMITCY 75
+ T + S ++ + + + + I
Sbjct: 74 TNGNAEAPPNTQNGGTTSEQTEGLPSDFNQLYSFLKTTTDKNDLGRYVYIEQTPTRIFIR 133
Query: 76 IPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQE 132
+ F L+++ +L + ++ HT + N+ +S
Sbjct: 134 FNNTIMFDGNSAVLKEEGKQVLNKFMPGIKAVNKYIKSCSVSGHTAKAVSDVNDWDLSAA 193
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + Y+ + +V G A PI N T GR N+R+EI I
Sbjct: 194 RASSVVKYMDYNRCVDSEKFTVEGKACYTPIADNSTAEGRAANRRVEIMIV 244
>gi|126642630|ref|YP_001085614.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii ATCC 17978]
Length = 170
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 60/166 (36%), Gaps = 6/166 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
++GC +K + T + + L + L +
Sbjct: 1 MTGCAS-----RKPATTATTGTTNPSTVNTTGLSEDAALNAQNLAGASSKGVTEANKAAL 55
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
V L + LQ A L ++ +A+ HTD GT + N+ + + RA
Sbjct: 56 AKRVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDERGTREYNMALGERRA 115
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+++YLI + + + + + P++ + + N+R+EI
Sbjct: 116 KAVQNYLIT-SGVNPQQLEAVSYGKEAPVNPGHDESAWKENRRVEI 160
>gi|239906259|ref|YP_002952999.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
gi|239796124|dbj|BAH75113.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
Length = 341
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 59/168 (35%), Gaps = 15/168 (8%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFV-SEV 86
+ SLD E +L + V + + + F +
Sbjct: 176 EKAPKPGEERTGPTRKSLDDIRKELSGKLDVTAGAVEVRPRDNGVELNLRGAAFFDLASA 235
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLI 142
++ +P+L+ IA L P + ++ HTD++ N +S RA + +LI
Sbjct: 236 EVKPGGIPLLRDIAATLAGTP-YKVTVEGHTDNLPMESWLYPSNWELSSARASRVARFLI 294
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGR------QNNQRIEIQIFP 184
+ + V G A P+ N GR N+R+ I + P
Sbjct: 295 D-HGVARDHLRVEGLADTQPVAPNTDPAGRSIPENQARNRRVVILVSP 341
>gi|332707360|ref|ZP_08427410.1| peptidoglycan-associated lipoprotein [Lyngbya majuscula 3L]
gi|332353851|gb|EGJ33341.1| peptidoglycan-associated lipoprotein [Lyngbya majuscula 3L]
Length = 287
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 69 GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
D + +P + F S+ L + +L I T L +PS+ I I HTD+ K N
Sbjct: 173 ADKLKVTLPSDILFEESKSTLRPEAGLILDKIVTDLQAYPSSTIRIAIHTDNPREAKENR 232
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S ERA ++ YL S R++ + G+ P+ NDT+V +Q N+R+EI +
Sbjct: 233 NLSFERAKAVQQYLSSALDDSYRWL-IIGYGETRPLVANDTEVNQQRNRRVEIAV 286
>gi|322383007|ref|ZP_08056837.1| MotS-like protein [Paenibacillus larvae subsp. larvae B-3650]
gi|321153030|gb|EFX45490.1| MotS-like protein [Paenibacillus larvae subsp. larvae B-3650]
Length = 254
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 9/170 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ +K K + D + K L + + + I V ++ +
Sbjct: 85 TDKKTKERQAAAADMERKEKELQDILKTVQAYIEENHLEAQIAVGNSERGVSVTLKDLFL 144
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-----KNNLLISQERAD 135
F + L+ + P+L +A++ T I+I+ HTD+I ++N +S R+
Sbjct: 145 FDLGKAELKPEAYPVLNKLASLFPTL-DTKISIEGHTDNIPVRTGSPFQDNWGLSNARSL 203
Query: 136 VIKSYLIQR--GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ Y + S+ G+A P+ ND+ R N+R+EI I
Sbjct: 204 SVLRYFTTKADPKISDSKFMSTGYADTIPVAPNDSMENRAKNRRVEIVIL 253
>gi|149191535|ref|ZP_01869782.1| protein F-related protein [Vibrio shilonii AK1]
gi|148834609|gb|EDL51599.1| protein F-related protein [Vibrio shilonii AK1]
Length = 208
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 82/204 (40%), Gaps = 24/204 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKV--------------------FLHKSNDTDIVNK 41
+K+ G+ + + ++GC S K+ + V
Sbjct: 4 LKQAGM-VLAASLLTGCSAVSSTTSKLFPDMLQTAPKSEFDVMHPEWADAPKIASTSVQG 62
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+G ++ + + L + G+ + GD + + + F + LQ +
Sbjct: 63 PYGQMRTESWNVLERYLVNNGLDYELVPGDYVMIRLKQKIHFNTGSAHVASTSAQWLQQL 122
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A+ L+ + I HTD+ GT+ N +S +RA+ ++ LI + V + I RG+
Sbjct: 123 ASFLSGQQGIDVVIGGHTDNTGTVAINDKLSDKRAESVRQTLISQRVPR-QIIYTRGYGE 181
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF 183
P TN T+ G+ N+R+E+ +
Sbjct: 182 NVPECTNQTQYGKACNRRVELTLI 205
>gi|34581206|ref|ZP_00142686.1| peptidoglycan-associated lipoprotein precursor [Rickettsia sibirica
246]
gi|28262591|gb|EAA26095.1| peptidoglycan-associated lipoprotein precursor [Rickettsia sibirica
246]
Length = 155
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 30/182 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ L+ + ++GC R + ++ + K F +
Sbjct: 1 MKTKITLAFLTLFVLAGCNTTKRAPQFDGNMNQSEETSLMKDF------------EKHAG 48
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ L K L+ A L+K P + I+ H D
Sbjct: 49 NAVW----------------FAFDSSALSPKAKEELERQACWLSKHPEVKVTIEGHCDER 92
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IE 179
GT + NL + + RA K +L +G+ NR ++ + P +T+ N+R +
Sbjct: 93 GTKEYNLGLGERRAAAAKKFLAHKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVT 151
Query: 180 IQ 181
+
Sbjct: 152 VV 153
>gi|224582568|ref|YP_002636366.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|224467095|gb|ACN44925.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|323129061|gb|ADX16491.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Typhimurium str. 4/74]
gi|326622475|gb|EGE28820.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Dublin str. 3246]
gi|326627054|gb|EGE33397.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9]
Length = 182
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 64/181 (35%), Gaps = 13/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C K S + G + + +
Sbjct: 14 VLKGLMIALPVM-AIAACSS----NKNASNDGSEGGMLNGAGTGMDANGNGNMSSEEQAR 68
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + +++ + + + F ML A L PS + ++ H D
Sbjct: 69 LQMQQLQQNNIV-------YFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 121
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 122 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 180
Query: 181 Q 181
Sbjct: 181 V 181
>gi|254491758|ref|ZP_05104937.1| OmpA family protein [Methylophaga thiooxidans DMS010]
gi|224463236|gb|EEF79506.1| OmpA family protein [Methylophaga thiooxydans DMS010]
Length = 306
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 7/161 (4%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
T+ + + ++ +++ + D + I V F E LE+ +
Sbjct: 104 ATENDIRTIKELTKQLSGALADMIETEDVIIKQGEDWLELEIKSRVLFESGEARLERAAV 163
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSN 149
P++ IA IL + I ++ TD+ + N +S RA + +L+ R
Sbjct: 164 PVIGKIADILQTSAN-PIQVEGFTDNNPINTSRFPSNWELSAARAASVV-HLLDRYGIQP 221
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+S G+ PI N T+ GRQ N+R+ + + ++
Sbjct: 222 DRMSAIGYGEYKPIADNATEEGRQKNRRVVLVVLGSDKSRR 262
>gi|254459056|ref|ZP_05072479.1| OmpA domain protein [Campylobacterales bacterium GD 1]
gi|207084327|gb|EDZ61616.1| OmpA domain protein [Campylobacterales bacterium GD 1]
Length = 254
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 66/178 (37%), Gaps = 12/178 (6%)
Query: 16 SGC-----GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-----DTGIVV 65
SGC + G LD +D VV
Sbjct: 78 SGCMIKLDSDKDGVPDTDDKCPNTPAGTKVDYRGCELDSDDDGIVDSKDKCPDTSKDFVV 137
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
G T + V+ S+ + ++ + LQ A L + P I I +TDSIG+
Sbjct: 138 DGYGCPQTATLKVN-FAPSKYNVSEELVNDLQNFALFLKENPGYQILIYGYTDSIGSAAA 196
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +SQ RA+ +K + R ++ G PI N TK GR N+RIE+++
Sbjct: 197 NKTLSQNRANAVKE-ALSRYGIKTTRMTAIGKGEANPIADNTTKTGRAENRRIEVELL 253
>gi|70729063|ref|YP_258799.1| flagellar motor protein MotD [Pseudomonas fluorescens Pf-5]
gi|68343362|gb|AAY90968.1| motB protein [Pseudomonas fluorescens Pf-5]
Length = 294
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 60/169 (35%), Gaps = 7/169 (4%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSE 85
K + S D F + + V + + + F +
Sbjct: 84 KDSDQTDAGIAGASDPLKSIADDISAAFGDLISSNQMTVRGNELWVEIELNSSLLFGSGD 143
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYL 141
+ ++ +A IL F I ++ TD++ N +S R+ I L
Sbjct: 144 AMPSDQAFTIIDKVAKILKPF-DNPIHVEGFTDNLPIQTAQYPTNWELSSARSASIVRML 202
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+GV+ R SV G+ P+ N T GR N+R+ + + ++++
Sbjct: 203 AMQGVNPARMASV-GYGEFQPVANNATAEGRARNRRVVLVVSRNLDVRR 250
>gi|330812625|ref|YP_004357087.1| hypothetical protein PSEBR_a5553 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380733|gb|AEA72083.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 436
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 54/143 (37%), Gaps = 7/143 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ +++ I V D I + ++ F P++ IA + K
Sbjct: 294 RLAGFLADEIRANRIAVEDAVDRSVVTIRGDELFASGSASIKDDFQPLMLRIADAVRKVK 353
Query: 108 STVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + H+D+ +N +S+ RA + L + R S G + P+
Sbjct: 354 G-QVLVTGHSDNRPIATLRFPSNWALSEARAQSVLQILSAKTGQPER-FSAEGRSDTEPL 411
Query: 164 DTNDTKVGRQNNQRIEIQIFPRG 186
+N T GR N+R+EI + G
Sbjct: 412 ASNATTEGRARNRRVEITVLAEG 434
>gi|299145363|ref|ZP_07038431.1| lipoprotein PG3 [Bacteroides sp. 3_1_23]
gi|298515854|gb|EFI39735.1| lipoprotein PG3 [Bacteroides sp. 3_1_23]
Length = 238
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 14/190 (7%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI- 72
+ G + + G +DKA E + ++ + + +
Sbjct: 43 ILGGVIGKGKGAAIGAAIGTAVGAGTGALIGKKMDKAAAEAKQ-IEGAQVEQITDNNGLQ 101
Query: 73 --TCYIPVHVSFV-SEVFLEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL----- 123
+ F L L A LN+ ++I +TD+ G
Sbjct: 102 AVKVTFDSGILFTTGNANLSAAAKSALSKFANNVLNQNRDMDVSIYGYTDNQGWKNSTAA 161
Query: 124 ---KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL +SQERA + SYL+ GVS+N+ SV+G P+ +NDT GR+ N+R+E+
Sbjct: 162 QSQQKNLNLSQERAQSVSSYLLSCGVSTNQIKSVQGMGESDPVASNDTAAGREQNRRVEV 221
Query: 181 QIFPRGNIKK 190
++ + K
Sbjct: 222 YMYASEQMIK 231
>gi|289627038|ref|ZP_06459992.1| OmpA family protein [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647994|ref|ZP_06479337.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 2250]
gi|330867282|gb|EGH01991.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 381
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD E + ++D+ + R D++ PV SF + L L +
Sbjct: 141 DPKVTQAWLDGYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 200
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 201 TRLAKVVEGDQKTAVLILGHADTSGPTEANQKISQERAQSVAAIFRL-SGLERNRLSQRG 259
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 260 MGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 292
>gi|120552993|ref|YP_957344.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
gi|120322842|gb|ABM17157.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 277
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 61/160 (38%), Gaps = 6/160 (3%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV 86
+ ++T + + E + ++ + V+ D + +F +
Sbjct: 99 DERTERSETRQIPGGVLDLAGRLVRELEEEVASETLHVNYDEDQVVIRFSEEATFRSGDA 158
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLI 142
++ + +P+++ + ++L+ + + H+D ++N +S RA + L+
Sbjct: 159 TIKPEMIPIIERVVSVLSACSG-DVVVSGHSDDRPISSSQYRSNWDLSAARAVSVVHELV 217
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G A P+ N + R N+R+EI I
Sbjct: 218 LNRDIPAERVVAAGRAETRPLAPNTSPENRAINRRVEIAI 257
>gi|113866689|ref|YP_725178.1| outer membrane protein [Ralstonia eutropha H16]
gi|113525465|emb|CAJ91810.1| outer membrane protein [Ralstonia eutropha H16]
Length = 425
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 7/141 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + + ++ I V + + K LP+L +A +NK
Sbjct: 287 RLAELLKDEIARGVISVQEDATRSAVTFRGDDMFGGGRAEVSDKVLPLLDKVAGEINKVS 346
Query: 108 STVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + H+D++ +N ++S+ERA + YL + + + G P+
Sbjct: 347 G-KVTVVGHSDNVPIKTAKYPSNQVLSEERAATVTEYLASK-GVAKNRLEAIGKGDSEPL 404
Query: 164 DTNDTKVGRQNNQRIEIQIFP 184
N T R N+R+EI + P
Sbjct: 405 TDNKTPAARARNRRVEIVVTP 425
>gi|257866373|ref|ZP_05646026.1| flagellar motor protein MotB [Enterococcus casseliflavus EC30]
gi|257873111|ref|ZP_05652764.1| flagellar motor protein MotB [Enterococcus casseliflavus EC10]
gi|257800331|gb|EEV29359.1| flagellar motor protein MotB [Enterococcus casseliflavus EC30]
gi|257807275|gb|EEV36097.1| flagellar motor protein MotB [Enterococcus casseliflavus EC10]
Length = 256
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 6/153 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLP 94
T + N++ D+ E V D + + + F +
Sbjct: 95 TQLENQQLEKISDQLSQELAASGLKEQTEVRLESDGLHITLASSILFASGSAEITDTTRQ 154
Query: 95 MLQLIATILNKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L L++ L K + I I HTD+ G ++N +S RA + Y I +G
Sbjct: 155 SLDLLSDSLKKLKANKIVIAGHTDNVPEKGNGRYQSNWDLSSARAITVMEYFISKGAVLE 214
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +++ FA P N+T GR N+R+E+ I
Sbjct: 215 KNAAIQAFADTEPKADNNTPQGRSENRRVEMII 247
>gi|297583574|ref|YP_003699354.1| OmpA/MotB domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297142031|gb|ADH98788.1| OmpA/MotB domain protein [Bacillus selenitireducens MLS10]
Length = 256
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 54/141 (38%), Gaps = 6/141 (4%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
L++ + + I +R + + F + + + P L+ + T++
Sbjct: 106 LEEVNEFIEDNDLTENISATRDDRGVVLVLQEQALFETARAEILPQAEPFLEKVGTLVTT 165
Query: 106 FPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ + ++ HTDS +N +S RA + +++ R G+
Sbjct: 166 VPNM-VKVEGHTDSRPINTVQFPSNWELSGARASSVIRFILSNFDVDERRFLAVGYGETR 224
Query: 162 PIDTNDTKVGRQNNQRIEIQI 182
P+ N T Q N+R+ I I
Sbjct: 225 PVAPNTTPDNLQQNRRVVIVI 245
>gi|90418977|ref|ZP_01226888.1| peptidoglycan-associated lipoprotein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337057|gb|EAS50762.1| peptidoglycan-associated lipoprotein [Aurantimonas manganoxydans
SI85-9A1]
Length = 177
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 59/181 (32%), Gaps = 18/181 (9%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ ++ ++GC KK L + +N G+
Sbjct: 11 RIAFAVVASLAVAGCAS-----KKDALPDNAAGLGLNGANGA-----------NGAYGSA 54
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
D L L A LN++ I I+ H D GT
Sbjct: 55 TPGSTQDFTVNVGDRVFFDTDSTSLRADAQQTLTQQARWLNQYSQYSIVIEGHADERGTR 114
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ NL + RA + YL+Q+GV +NR ++ + + P+ D N+R + +
Sbjct: 115 EYNLALGARRAAATRDYLVQQGVPANRMRTIS-YGKERPVAVCDDISCWSQNRRA-VTVL 172
Query: 184 P 184
Sbjct: 173 S 173
>gi|253990531|ref|YP_003041887.1| hypothetical protein PAU_03057 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211638897|emb|CAR67512.1| similar to putative membrane protein [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253781981|emb|CAQ85145.1| similar to putative membrane protein [Photorhabdus asymbiotica]
Length = 583
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 6/145 (4%)
Query: 48 DKAEDEFQMQLQDTGIV------VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
++ Q + V+ + + V + L+ +L
Sbjct: 409 ERLRPRLQAAIASDVAEPSEKKPVTTAVPQTISLNSLALFDVGQAKLKVGSTKVLVNALI 468
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ P +IAI +TDS G N +S RA+ ++ +L+Q +V+G
Sbjct: 469 NIRAKPGWLIAITGYTDSTGDAAKNRALSLARAEAVRDWLLQTSDIPLACFAVQGEGATR 528
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRG 186
P+ TN T GR N+R+EI++ P
Sbjct: 529 PVATNSTAAGRAANRRVEIRLVPNA 553
>gi|238756015|ref|ZP_04617339.1| Peptidoglycan-associated lipoprotein [Yersinia ruckeri ATCC 29473]
gi|238705740|gb|EEP98133.1| Peptidoglycan-associated lipoprotein [Yersinia ruckeri ATCC 29473]
Length = 167
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 59/181 (32%), Gaps = 20/181 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + I+ C + + S ++ +LQ
Sbjct: 6 VLKGLMLALPV-LAIAACSSNKSANNDQSGMGAGTG---TESSNLSSEEQARLQMQELQK 61
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + F ML A L PS + ++ H D
Sbjct: 62 NNI---------------VYFGFDKYDIASDFAQMLDAHAAFLRSNPSYKVVVEGHADER 106
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 107 GTPEYNIALGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVL 165
Query: 181 Q 181
Sbjct: 166 V 166
>gi|238757961|ref|ZP_04619142.1| Peptidoglycan-associated lipoprotein [Yersinia aldovae ATCC 35236]
gi|238703715|gb|EEP96251.1| Peptidoglycan-associated lipoprotein [Yersinia aldovae ATCC 35236]
Length = 168
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 19/181 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + I+ C + S ++ +LQ
Sbjct: 6 VLKGLMLALPV-LAIAACSSNKSANNDQSGMGAGTGTENGSNLSS--EEQARLQMQELQK 62
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + F ML + L PS + ++ H D
Sbjct: 63 NNI---------------VYFGFDKYDIGSDFAQMLDAHSAFLRSNPSYKVVVEGHADER 107
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 108 GTPEYNIALGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVL 166
Query: 181 Q 181
Sbjct: 167 V 167
>gi|254519411|ref|ZP_05131467.1| chemotaxis motB protein [Clostridium sp. 7_2_43FAA]
gi|226913160|gb|EEH98361.1| chemotaxis motB protein [Clostridium sp. 7_2_43FAA]
Length = 246
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 6/161 (3%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ ++ + + + + + +V F S L ++
Sbjct: 87 EGGESLTEQEKMYKNVKEFVNENNLGSVVDIIDNKRGVIIQLRDNVLFETSSSDLREESK 146
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSN 149
+L I L I ++ HTD+ + N +S +RA + Y I+
Sbjct: 147 EVLNKI-NSLIASIDNQILVEGHTDNRPINTSRFPSNWELSADRAVNVVKYFIEVMGQDP 205
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
S G+ +P+ NDT N+R++I I ++
Sbjct: 206 SRFSAAGYGEYHPVAPNDTYENMAKNRRVDILIVTTEKEEE 246
>gi|229587133|ref|YP_002845634.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia africae
ESF-5]
gi|228022183|gb|ACP53891.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia africae
ESF-5]
Length = 155
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 64/182 (35%), Gaps = 30/182 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ L+ + ++GC R + ++ + K F +
Sbjct: 1 MKTKIALAFLALCVLAGCNTTKRAPQFDGNMNQSEETSLMKDF------------EKHAG 48
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ L K L+ A L+K P + ++ H D
Sbjct: 49 NAVW----------------FAFDSSALSPKAKEELERQACWLSKHPEVKVTVEGHCDER 92
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IE 179
GT + NL + + RA + +L+ +G+ NR ++ + + P +T+ N+R +
Sbjct: 93 GTKEYNLGLGERRAAAAQKFLVHKGIDHNRLNTIS-YGKERPAMMGNTEEAFAYNRRAVT 151
Query: 180 IQ 181
+
Sbjct: 152 VV 153
>gi|167035287|ref|YP_001670518.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166861775|gb|ABZ00183.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 239
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 6/150 (4%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ G L + + + V + D + L
Sbjct: 95 DTPANTAVDHMGCPLKEYPAAPPATVAEPSPEVIILDDNGAV-----MFAFDSADLTPAA 149
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
LQ + L+ + + HTD++G+ N +S+ RA + YLI + +
Sbjct: 150 QQRLQGLVAKLDSPTVAKVRVIGHTDNVGSDSYNQALSERRASSVAEYLIGQ-GLEAGKV 208
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +G P+ N+T+ GR N+R+E+ +
Sbjct: 209 TSQGRGESEPVTDNETEEGRARNRRVELHL 238
>gi|157829031|ref|YP_001495273.1| peptidoglycan-associated lipoprotein precursor [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165933755|ref|YP_001650544.1| peptidoglycan-associated lipoprotein [Rickettsia rickettsii str.
Iowa]
gi|157801512|gb|ABV76765.1| peptidoglycan-associated lipoprotein precursor [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165908842|gb|ABY73138.1| peptidoglycan-associated lipoprotein [Rickettsia rickettsii str.
Iowa]
Length = 155
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 29/177 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ L+ + ++GC R + ++ + K F +
Sbjct: 1 MKTKITLAFLALCMLAGCNTTKRAPQFDGNMNQSEETSLMKDF------------EKHAG 48
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ L K L+ A L+K P + ++ H D
Sbjct: 49 NAVW----------------FAFDSSDLSPKAKEALERQACWLSKHPEVKVTVEGHCDER 92
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + NL + + RA K +L +G+ NR ++ + P +T+ N+R
Sbjct: 93 GTKEYNLGLGERRAAAAKKFLAHKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRR 148
>gi|332882653|ref|ZP_08450265.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679453|gb|EGJ52438.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 290
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 5/133 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L D + + ++ I + F + K +L+ +A ++ P ++ H
Sbjct: 136 LDDQDVDIKVEKGVVFINISDKMLFSSGSYTISKNAKNVLEKVAKVVKNKPDFEFMVEGH 195
Query: 117 TDSIGTLKNN----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD + K+ +S RA I L + ++ G +Y P+ +N T GR
Sbjct: 196 TDDVRIKKDCIRDNWDLSVMRATEIVRVLQNDFGIAPERMTAAGRSYYVPVASNTTAEGR 255
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 256 AQNRRTRIVVLPK 268
>gi|330959066|gb|EGH59326.1| OmpA/MotB [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 271
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + ++ + + + L+ + + L
Sbjct: 126 ASAQQQGRWLEDQILS--LATTQTDRGLVMTLGDVLFDAGHAELKNSASRTILKVVQFLQ 183
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P V+ I+ +TDS G + NL +S++RA + L+ + I V+G+ ++P+D
Sbjct: 184 INPRRVVRIEGYTDSTGDRQENLNLSKDRAQAVADMLMDL-GIDEKRIQVQGYGQQFPVD 242
Query: 165 TNDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 243 GNASERGRAQNRRVEIV 259
>gi|114561780|ref|YP_749293.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114333073|gb|ABI70455.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 479
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 62 GIVVSRIGDMIT----CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
GI + + D I + + L + P+++++A L P + + H+
Sbjct: 350 GIDLQGLTDEIAKTGHVALDGLLFKYDSDELLPEAYPIVEVVAQYLQTHPKQLFYVVGHS 409
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ N +S++RA IK+ LI++ S + + +G PI N + G++ N+R
Sbjct: 410 DDQGSQAYNQTLSEKRATAIKTRLIKQFSISAQQVEAKGVGEYSPIANNLDEAGQKQNRR 469
Query: 178 IEIQI 182
+E+ I
Sbjct: 470 VELVI 474
>gi|289766688|ref|ZP_06526066.1| outer membrane protein [Fusobacterium sp. D11]
gi|289718243|gb|EFD82255.1| outer membrane protein [Fusobacterium sp. D11]
Length = 180
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ +L+ I + + + I I HTDSIG+ + N +S+
Sbjct: 52 IVLDERSLNFDFDKSIVKAQYFDLLKNIKEFVEQN-NYEITIVGHTDSIGSNQYNFGLSR 110
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
RA+ +K+ L++ G++ +R + + + PI TN TK GR N+R+E ++ R +++
Sbjct: 111 RRAEAVKAKLLEFGLAEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQREAVQE 169
>gi|306820526|ref|ZP_07454159.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551440|gb|EFM39398.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 432
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 67 RIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + + V F ++ + + +L + +L K I HTDS T +
Sbjct: 315 IEANSVMIKLDSGVLFDVNKYDIREDANDVLMKLIDVLKKAKVEKFEIYGHTDSDDTDEY 374
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N ++S+ RA+ +K +L++ G+++N I+ +GF K PI TN TK G+Q N+R+EI I
Sbjct: 375 NQVLSENRANSVKDFLVKNGITAN--IATKGFGEKKPIATNSTKEGKQLNRRVEIII 429
>gi|90408165|ref|ZP_01216333.1| flagellar motor protein [Psychromonas sp. CNPT3]
gi|90310695|gb|EAS38812.1| flagellar motor protein [Psychromonas sp. CNPT3]
Length = 299
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 73/168 (43%), Gaps = 6/168 (3%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ + + + + ++ E Q ++Q+ I + +G + I
Sbjct: 119 SKEDIPEEGNQGNEQSSEASEAQHQLAKAVAQELQDEIQEGAIEIESLGQQLIIRIREKG 178
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERAD 135
+F FL+ +F P+++ +A IL P VI I HTD+ ++N +S +RA
Sbjct: 179 AFPSGSAFLQPRFRPVIRKVAKILADIPG-VITISGHTDNEQVHSELYRSNWDLSAQRAV 237
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +++ N+ + V G+A P+ + R+ N+R+EI I
Sbjct: 238 SVAHEMLKIKKIRNKHLVVAGYANSKPLTDSKILSERKRNRRVEIMIM 285
>gi|326316785|ref|YP_004234457.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323373621|gb|ADX45890.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 219
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + L + + + VI HTDSIGT N +S RA+ +
Sbjct: 110 DAFFDFDKSVLKPEGKAKLDDLVSKVKNVNLEVIIAVGHTDSIGTDAYNQKLSVRRAEAV 169
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + + G K PI N TK GR N+R+EI++
Sbjct: 170 KAYLVSK-GIEKNRVYTEGKGEKQPIADNKTKEGRAKNRRVEIEVV 214
>gi|224812457|gb|ACN64871.1| OmpA family lipoprotein [Burkholderia pseudomallei]
Length = 177
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 62/184 (33%), Gaps = 21/184 (11%)
Query: 1 MIKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K+L L+ M ++ ++ C + + + T +
Sbjct: 9 MSKKLRLAFAMLMIGALAACKSGVKLDEHANQGDAVSTQPNPENVAQ------------- 55
Query: 59 QDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + D ++ ++ +LQ A L P I IQ +T
Sbjct: 56 ----VTVDPLNDPNSPLAKRSVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNT 111
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ + + + + P+ + N+R
Sbjct: 112 DERGTSEYNLALGQKRAEAVRR-ALSLLGVGDAQMEAVSLGKEKPVALGHDEASWAQNRR 170
Query: 178 IEIQ 181
++
Sbjct: 171 ADLV 174
>gi|117921584|ref|YP_870776.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117613916|gb|ABK49370.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 373
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 51/109 (46%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++K++ ++ +A +NK P + I H ++G + N+++S +RA
Sbjct: 256 DVGSIQFANDSAVVKKEYYKDIERLANYMNKNPEFTVEIAGHASNVGKPEYNMVLSDKRA 315
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
D + L+++ S ++ G+ P+ D+K N+RIE +
Sbjct: 316 DAVAKILVEKYGISQSRVTSNGYGITKPLVAGDSKEAHAANRRIEAIVT 364
>gi|120611935|ref|YP_971613.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120590399|gb|ABM33839.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
Length = 219
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + L + + + VI HTDSIGT N +S RA+ +
Sbjct: 110 DAFFDFDKSVLKPEGKAKLDDLVSKVKNVNLEVIIAVGHTDSIGTDAYNQKLSVRRAEAV 169
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + + G K PI N TK GR N+R+EI++
Sbjct: 170 KAYLVSK-GIEKNRVYTEGKGEKQPIADNKTKEGRAKNRRVEIEVV 214
>gi|153806760|ref|ZP_01959428.1| hypothetical protein BACCAC_01032 [Bacteroides caccae ATCC 43185]
gi|149131437|gb|EDM22643.1| hypothetical protein BACCAC_01032 [Bacteroides caccae ATCC 43185]
Length = 238
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/229 (21%), Positives = 83/229 (36%), Gaps = 41/229 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSN--------------------------- 34
+K + L M I SGC + K + +
Sbjct: 4 MKFMVLFMSITMIFSGCASMNNTGKGAAIGGGSGAALGAILGGVIGKGKGAAIGAAIGTA 63
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFV-SEVFLEK 90
G +DKA E + ++ + + + + F L
Sbjct: 64 VGAGTGALIGKKMDKAAAEAKQ-IEGAQVEQITDNNGLQAVKVTFDSGILFTTGNANLSA 122
Query: 91 KFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL--------KNNLLISQERADVIKSYL 141
L A LN+ ++I +TD+ G + NL +SQERA + SYL
Sbjct: 123 AAKSALSKFANNVLNQNRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYL 182
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ GVS+N+ V+G P+ +NDT GR+ N+R+E+ ++ + K
Sbjct: 183 LSCGVSTNQIKGVQGMGESDPVASNDTAAGREQNRRVEVYMYASEQMIK 231
>gi|24374288|ref|NP_718331.1| peptidoglycan-associated lipoprotein [Shewanella oneidensis MR-1]
gi|24348826|gb|AAN55775.1|AE015714_2 peptidoglycan-associated lipoprotein [Shewanella oneidensis MR-1]
Length = 177
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 9/178 (5%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + IS C S + S +N + + Q
Sbjct: 8 KAMLVALPIMAISACSSTSESETDAMGSTSGSGSELNGGVQTGG--IGGMLSPEEQQRQE 65
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + I ++ ++ +L+ T L + PS + I+ H D GT
Sbjct: 66 LEQLRKEHII------YFDFDRSEVQTEYAAVLEAHGTYLVEHPSVRVLIEGHADERGTP 119
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA + +Q +S+ + + P+D T G N+R +
Sbjct: 120 EYNIALGERRAKAVAK-YLQGMGVQPSQMSIVSYGEEKPLDFTRTDEGFAKNRRAVLV 176
>gi|298368928|ref|ZP_06980246.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298282931|gb|EFI24418.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 216
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 68/207 (32%), Gaps = 35/207 (16%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM------------ 56
+ +++ + CG E S + + +
Sbjct: 4 IAVISALCACGQKPDEPAAQQQQASPVQASTTETPQTQPEPVAPSAPAHATTPAPASAPA 63
Query: 57 --------------QLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIAT 101
Q + + + G I + V F + L+ + LQ A
Sbjct: 64 TAQNSSAAAQGSSLTAQSSSLSGTETGFNIQINLSSDVLFDFDKAELKPEADRELQKAAD 123
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
I+ + +I I +TDS GT N +S RA +K++ +G+ ++ G
Sbjct: 124 IIRQKGKGLILISGYTDSKGTDAYNKRLSLVRAQAVKNWFEAQGL--HQNYQTEGLGAAN 181
Query: 162 PIDTN------DTKVGRQNNQRIEIQI 182
P+ N D GR N+R+EI +
Sbjct: 182 PVAPNTNDDGSDNPEGRAKNRRVEIIV 208
>gi|226949496|ref|YP_002804587.1| chemotaxis MotB protein [Clostridium botulinum A2 str. Kyoto]
gi|226843238|gb|ACO85904.1| chemotaxis MotB protein [Clostridium botulinum A2 str. Kyoto]
Length = 254
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 75/216 (34%), Gaps = 36/216 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS------------------ 46
L L + + + K + + N
Sbjct: 23 LTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKAGSNVLQEGGGGGASVGKAGVSIVPS 82
Query: 47 --------LDKAEDEFQMQLQDTG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ + + + + +++ +G + V D + I V F + + K+
Sbjct: 83 DSVTEDIKMKEIKSKLEKEIEKSGYSDKVKVGVDADGLEIDIQDVVLFNSGDAEVLKQSS 142
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSN 149
+L+ I+ +L I + HTD+ ++N +S RA + ++L G S
Sbjct: 143 ALLKQISKMLKGL-DNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGISA 201
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S++ + P N T+ GR N+R+EI I +
Sbjct: 202 NKLSIQAYGEYMPKFNNATEAGRAKNRRVEISIVRK 237
>gi|119900180|ref|YP_935393.1| hypothetical protein azo3891 [Azoarcus sp. BH72]
gi|119672593|emb|CAL96507.1| putative outer membrane protein [Azoarcus sp. BH72]
Length = 434
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 8/142 (5%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKF 106
D+ + ++++ + V + D I F L + LP++ I + +
Sbjct: 292 DRLQGFLAPEIREGLVTVRDLPDRSVVQIQGDGLFEPASATLAPRVLPLMARIGEAVARV 351
Query: 107 PSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ ++ H+D +N +SQ RAD + + L + I G A P
Sbjct: 352 KG-SVLVRGHSDDRPIRSARFPSNWHLSQARADSVAAVLAPQLG--GARIETEGRAESEP 408
Query: 163 IDTNDTKVGRQNNQRIEIQIFP 184
+ +NDT GR N+R+EI +FP
Sbjct: 409 VASNDTPEGRARNRRVEIIVFP 430
>gi|262407869|ref|ZP_06084417.1| outer membrane protein [Bacteroides sp. 2_1_22]
gi|294646781|ref|ZP_06724404.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
gi|262354677|gb|EEZ03769.1| outer membrane protein [Bacteroides sp. 2_1_22]
gi|292637941|gb|EFF56336.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
Length = 255
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 71/181 (39%), Gaps = 14/181 (7%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI- 72
+ G + + G +DKA E + ++ + + +
Sbjct: 60 ILGGVIGKGKGAAIGAAIGTAVGAGTGALIGKKMDKAAAEAKQ-IEGAQVEQITDNNGLQ 118
Query: 73 --TCYIPVHVSFV-SEVFLEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL----- 123
+ F L L A LN+ ++I +TD+ G
Sbjct: 119 AVKVTFDSGILFTTGNANLSAAAKSALSKFANNVLNQNRDMDVSIYGYTDNQGWKNSTAA 178
Query: 124 ---KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL +SQERA + SYL+ GVS+N+ SV+G P+ +NDT GR+ N+R+E+
Sbjct: 179 QSQQKNLNLSQERAQSVSSYLLSCGVSTNQIKSVQGMGESDPVASNDTAAGREQNRRVEV 238
Query: 181 Q 181
Sbjct: 239 Y 239
>gi|284037429|ref|YP_003387359.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283816722|gb|ADB38560.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 704
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T + + S+ L L +A ++ P+ + I+ HTD+ G + N+ ++++
Sbjct: 593 TITMREVLFQQSQFTLLPGADTELDKMADMMETHPTMELLIEGHTDNQGDWEPNMKLAED 652
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R V+K YL+++ I + + PI +N+T+ R+ N+R+E I
Sbjct: 653 RVRVVKEYLLKK-GIKPERIQTKAWGPSKPIASNETEEKRKLNRRVEFTIL 702
>gi|114778393|ref|ZP_01453240.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
gi|114551356|gb|EAU53913.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
Length = 251
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 55/169 (32%), Gaps = 7/169 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ N T + D + V I +
Sbjct: 75 SSPQNTTSEGTPVSDNATIQRQGQKEGMEDNMRRILGSNSLGGVMDVKMSPGQIRLQMDA 134
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQER 133
+ F + L++ L+ +A +L + I + H+DS ++N +S R
Sbjct: 135 ALLFKPGQSELDESSRIPLKNLAKVLQTYTG-KIEVAGHSDSTPLAGRGYQSNWELSTMR 193
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A + LI + G+A P+ +N T GR N+R+E I
Sbjct: 194 ATAVVKALID-FGIEPGRLHAAGYADTRPLASNATAEGRAKNRRVEFTI 241
>gi|148265117|ref|YP_001231823.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146398617|gb|ABQ27250.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 1700
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 28/209 (13%)
Query: 1 MIKELGLSMFIMTTISG-----CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M + + L F + +++G C + + + + + + L K +
Sbjct: 1 MKRCIVLIFFFLVSVAGAKTVVCAETAPAETVKTAAGTREAAASGETTETHLPK-DQALT 59
Query: 56 MQLQDTGIVVSRIGDM---------------ITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
L D + GD + +P E + +++ +L+ +
Sbjct: 60 PWLLDPSVFAEDQGDRTEKRRVAEKEVKTIKLANVVPPIRFRTGEADIPDEYVALLRGVL 119
Query: 101 TILNKFPSTVIAIQSHTDSIG-------TLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+ + + H D +N +S+ERA Y + IS
Sbjct: 120 EKMRGRLNVRLHFVGHADPQSLSDPLKAKYGDNTGLSRERAGTTAEYCQRALGLPPEAIS 179
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ N T+ GR N+R+E+++
Sbjct: 180 YEGVGESKPVAGNATEDGRALNRRVEVEV 208
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 42/102 (41%), Gaps = 7/102 (6%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI-------SQERADVIKS 139
+ ++FL ++ L + V+ +++D+ + I S+ A +
Sbjct: 269 TVPEEFLQQIRQALINLRGKENIVVKFIAYSDNAPLEGRDERIYGDQAGLSKAVARRVAL 328
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +N + G P+ +NDT GR N+R+E++
Sbjct: 329 AVHDGLKEANVAVESDGKGASQPVASNDTTQGRAMNRRVEVE 370
>gi|325287126|ref|YP_004262916.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324322580|gb|ADY30045.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 343
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++ ++ I+ ++ P I+I+ HTD++G +NL +S+ RA +
Sbjct: 242 FDTGKSRIKADSYEVISEISKMMKSNPELKISIEGHTDNVGDASSNLKLSKNRAQAVL-M 300
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I + + GF P+D N T+ G+ N+R+E++
Sbjct: 301 AIVEEGINETRLKSEGFGQTKPLDDNTTEEGKAQNRRVELR 341
>gi|222111846|ref|YP_002554110.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY]
gi|221731290|gb|ACM34110.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY]
Length = 233
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 62/167 (37%), Gaps = 16/167 (9%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAED--EFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ + L + + + + E ++LQ I+ +P V F
Sbjct: 68 ETETRLQAAAGPATLLRAAEVPPQRLEQTHALLVELQAQPTP----EQAISIDLPADVLF 123
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ L L A +L +P I + HTD G N +SQ RA + + L
Sbjct: 124 DFDKAELRADAARSLDKAAELLKSYPQAPIDVVGHTDGKGGDTYNDALSQRRAAAVAAAL 183
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDT------KVGRQNNQRIEIQI 182
R R I+ RG + P+ N T GRQ N+R++I I
Sbjct: 184 QSRTG---RPIATRGMGKRQPVAPNTTPDGRDDPDGRQRNRRVQIVI 227
>gi|284034989|ref|YP_003384919.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283814282|gb|ADB36120.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 432
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ +S+ L L + +++ P+ I ++ HTD IG NL +S++R
Sbjct: 322 VTLKNIYFEMSKSNLLSASFAELNKLVSMMQDNPNMSIRLEGHTDIIGDHDKNLQLSRDR 381
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ YL+Q+G+ +R ++ G+ PI T T R+ N+R+E I
Sbjct: 382 VIACQRYLVQQGIDIDRIQTI-GYGDTRPILTKGTDEERKVNRRVEFVIL 430
>gi|304395220|ref|ZP_07377104.1| OmpA/MotB domain protein [Pantoea sp. aB]
gi|304357473|gb|EFM21836.1| OmpA/MotB domain protein [Pantoea sp. aB]
Length = 157
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 61/183 (33%), Gaps = 28/183 (15%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L M + + GC + + ++
Sbjct: 1 MKKNISL-MLLTLALVGCQSK--------------------------EHFSEAQIAAMKS 33
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G + G + + V+E L +Q +A L + I HTD+
Sbjct: 34 AGFTRNSEGWGLGLS-DKILFGVNESELTPSSKSNIQGMAKNLASTGIEHVRIDGHTDNY 92
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G N +S +RA+ + + + I RG P+ +N++ GR N+R+ I
Sbjct: 93 GKPDYNQQLSLKRANAVAAQWAEGASIPRGNIVTRGLGMSAPVTSNNSAQGRAQNRRVAI 152
Query: 181 QIF 183
I
Sbjct: 153 VIT 155
>gi|255013830|ref|ZP_05285956.1| outer membrane lipoprotein [Bacteroides sp. 2_1_7]
Length = 435
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
V + ++ + + + I ++ P +++ HTDS G +N +S+ R++ I
Sbjct: 334 FDVGKSTIKPESMGEINRIVKLMTDNPDLRFSVEGHTDSTGNEASNQTLSEARSNAIVGK 393
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L++ S +S G PI N T GR N+R+E
Sbjct: 394 LVEL-GISADRLSASGKGQSSPIADNGTDEGRAKNRRVEFV 433
>gi|229917739|ref|YP_002886385.1| OmpA/MotB domain protein [Exiguobacterium sp. AT1b]
gi|229469168|gb|ACQ70940.1| OmpA/MotB domain protein [Exiguobacterium sp. AT1b]
Length = 259
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 66/175 (37%), Gaps = 9/175 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDMITC 74
+ K+N T + LD+ +++ ++ G I + +
Sbjct: 66 ASTASNSDIERTDKTNTTANPRTYELAQLDELKEDVNKYIKKNGLESQIKATINSSGLVL 125
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLI 129
I F E L+ + Q I+ IL K I + HTD+I +N +
Sbjct: 126 TIQDRALFNLGEATLDADARAVAQNISQILEKAGKREIVVSGHTDNIPINTARFPSNWEL 185
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S RA L+ + ++ + PI TNDT+ GR N+R+E+ I P
Sbjct: 186 SSARATAFMRGLLANDALNPAQFTLASYGEFKPIATNDTEEGRSKNRRVEVLIKP 240
>gi|167589365|ref|ZP_02381753.1| OmpA family domain protein [Burkholderia ubonensis Bu]
Length = 333
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 47/108 (43%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + ++ + P L +A +L P+ + I HTD+ G N +SQ+R
Sbjct: 224 VALYGIYFDTDKAQVKPESKPQLDEMAKLLTGNPALKVYIVGHTDNQGAFARNADLSQKR 283
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
A+ + L + + +G A P+ +N GR N+R+E+
Sbjct: 284 AEAVAQALASTYRIAPARLVAKGVASLSPVASNGDDAGRAQNRRVELV 331
>gi|332999380|gb|EGK18965.1| ompA family protein [Shigella flexneri VA-6]
Length = 160
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 63/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + LQ +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQLQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEGLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|89076013|ref|ZP_01162376.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
gi|89048248|gb|EAR53829.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
Length = 355
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ +T IP + L IA L P T + + HTDS G N +
Sbjct: 229 EPVTVSIP---FAFDSYKITHADKERLAPIAKRLQDNPETELVVVGHTDSKGAEAYNQKL 285
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S+ERA + ++L+ + + G P+ +N T+ GR +N+R+++
Sbjct: 286 SEERAQKVATFLMNEYNLDSSRVRAEGRGELNPVASNKTEAGRTDNRRVDVT 337
>gi|84687704|ref|ZP_01015577.1| OmpA/MotB family protein [Maritimibacter alkaliphilus HTCC2654]
gi|84664287|gb|EAQ10778.1| OmpA/MotB family protein [Rhodobacterales bacterium HTCC2654]
Length = 165
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 26/184 (14%)
Query: 2 IKELGLSMFI--MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+ +++ + +S C R++ +N++ + D + Q
Sbjct: 1 MKKTTIALLMIGAVALSACS---RDRYNSATDGANNSGVAGSVN----DPTSTAYFNQTI 53
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + V + L + +L A LN + I+ H D
Sbjct: 54 GDRV----------------LFMVDQSTLSPQAQGILDQQAQWLNSNTAYSAIIEGHADE 97
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N+ + RA ++SYLI+RGV+ R +V + + P+ + Q N+R
Sbjct: 98 QGTREYNVALGARRASSVQSYLIERGVAPGRLKTVS-YGKERPLAICSDESCYQQNRRAV 156
Query: 180 IQIF 183
+
Sbjct: 157 TVLT 160
>gi|94311184|ref|YP_584394.1| OmpA/MotB [Cupriavidus metallidurans CH34]
gi|93355036|gb|ABF09125.1| putative outer membrane lipoprotein [Cupriavidus metallidurans
CH34]
Length = 167
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 67/180 (37%), Gaps = 29/180 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L+ +SGC + K L++ G +
Sbjct: 14 TTLAGLGALALSGCASPAH-------------------------KLTPAQIAVLKNQGFM 48
Query: 65 VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
++ G+ +P V F + + + L +A L + + HTD++GT+
Sbjct: 49 LT--GNGWELVMPDKVLFGFDDDTVSAEQQNALARVARTLRDAGIDALRVDGHTDNVGTI 106
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N +S RA+ + L+ + + VRGF PI N T +GR N+R+ I +
Sbjct: 107 EYNQQLSMRRAEAVARVLLT-CGFARDHLDVRGFGKTRPIADNGTALGRAENRRVAIIVT 165
>gi|209965863|ref|YP_002298778.1| outer membrane protein OmpA (probable proton motor MotY)
[Rhodospirillum centenum SW]
gi|209959329|gb|ACI99965.1| outer membrane protein OmpA (probable proton motor MotY)
[Rhodospirillum centenum SW]
Length = 281
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 4/159 (2%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAE-DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+++ L + + + R + D+ + + QLQ + +
Sbjct: 114 QRESILRSAREDQLALARTVAEEDRQRIQQLESQLQQ--YQARETEAGTVLTLSNINFDL 171
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L L+ + L P + I+ HTDS G N +SQ RA+ ++ +L+
Sbjct: 172 DSATLSPGDRQRLRPLVEYLRSQPDRAVLIEGHTDSQGPAAYNEELSQRRAEAVRDFLVD 231
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I+ RG P+ +N+T+ GR N+RIE+ +
Sbjct: 232 Q-GIQAARITTRGLGEGVPVASNETQAGRLQNRRIEVTV 269
>gi|311746197|ref|ZP_07719982.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1]
gi|126576424|gb|EAZ80702.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1]
Length = 640
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + ++D + + + + L+ + L L+ + L + +
Sbjct: 508 VERDKLQNVKDLDVELVPVAPGEEFVFENIFFDFDKYDLKPESLSSLKRLLKFLKENSNV 567
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I I HTD++G+ N +S +RA ++ YL+++G+ R + V G K P+ N
Sbjct: 568 NILISGHTDNVGSPSYNQELSLKRAQSVQQYLVEQGMHPGRVM-VEGKGDKEPMVPNTNS 626
Query: 170 VGRQNNQRIEIQIF 183
+ N+RI +++
Sbjct: 627 QNQALNRRITVKVL 640
>gi|332978389|gb|EGK15109.1| peptidoglycan-associated lipoprotein [Psychrobacter sp. 1501(2011)]
Length = 170
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 61/181 (33%), Gaps = 19/181 (10%)
Query: 2 IKELGLSMFIMTTIS--GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K +++ +S GC + + V + + + L
Sbjct: 5 LKISAITLVSAALLSTVGCATKPKNSEFVVAPMAVPGNAAYQT-------------GPLV 51
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + + ++ + +L L P + + HTD
Sbjct: 52 NNSAEVQAAAQNVR---SIVRFPFDSSEIDAEAASILNEQVAFLASHPDARVLVAGHTDE 108
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + + RA +++YL +GV+ R ++ + P+ + N+R E
Sbjct: 109 RGSREYNHALGERRAQAVRNYLASQGVTDARVETIS-YGEDRPVAAGTDEASHAQNRRAE 167
Query: 180 I 180
+
Sbjct: 168 L 168
>gi|153867892|ref|ZP_01998087.1| OmpA family protein [Beggiatoa sp. SS]
gi|152144788|gb|EDN71913.1| OmpA family protein [Beggiatoa sp. SS]
Length = 170
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKN 125
+ + + L + + ++ ++ + IA++ HTD+ G+
Sbjct: 48 ETDRGLQFTLYSVFFKTGKAKLLPEGEQQITEFVELIQEYDDSRAIAVEGHTDNRGSKAY 107
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S+ RA+ +++ LI +G+ NR I ++GF K P+ TN TK GRQ N+R+EI +
Sbjct: 108 NQRLSKRRAETVQNALITKGIEPNRLI-IKGFGEKEPLTTNATKNGRQQNRRVEIILLKN 166
Query: 186 GN 187
+
Sbjct: 167 QD 168
>gi|57505781|ref|ZP_00371707.1| outer membrane protein OprF [Campylobacter upsaliensis RM3195]
gi|57016054|gb|EAL52842.1| outer membrane protein OprF [Campylobacter upsaliensis RM3195]
Length = 316
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 57/143 (39%), Gaps = 2/143 (1%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
S G ++ G T + H F + + F +
Sbjct: 169 GSAKDGAVSRTSSKVKAICPVQPREGALLDENGCEKTISLEGHFEF-DKTTINPAFESRI 227
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
Q IA +L + ++ HTD+ G+ N +S+ RA + + + + + I V+G
Sbjct: 228 QNIAKVLEENEKYNTILEGHTDNTGSRAYNQKLSERRAQRVANE-LMKFGVDKKRIEVKG 286
Query: 157 FAYKYPIDTNDTKVGRQNNQRIE 179
+ P +N+TK GR +N+R+E
Sbjct: 287 YGQDKPRSSNETKEGRADNRRVE 309
>gi|295096555|emb|CBK85645.1| peptidoglycan-associated lipoprotein [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 173
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C G+ + Q
Sbjct: 6 VLKGLMIALPVM-AIAACSSNKNASNDQSGEGMMGAGTGMDANGN------GNMSSEEQA 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + I + + + F ML A L PS + ++ H D
Sbjct: 59 RLQMQQLQQNNIV------YFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 113 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVL 171
Query: 181 Q 181
Sbjct: 172 V 172
>gi|89056405|ref|YP_511856.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88865954|gb|ABD56831.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 658
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
Q Q+ + I D + + +L IA IL +
Sbjct: 486 ASQPTPQECEARIRDIQDETKIT-----FDPGSTEINRAAGEVLDEIAEILPDCMHVSME 540
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTD+ G NL +SQ RA+ + + L+ RGV + ++ +G+ PI N+T+ GR
Sbjct: 541 IGGHTDAQGGETMNLNLSQSRANAVLNGLLARGVLVSN-LAAQGYGESQPIADNETEDGR 599
Query: 173 QNNQRIEIQIFPRGNI 188
+ N+RIE ++ +
Sbjct: 600 EQNRRIEFRLLADAEV 615
>gi|110638196|ref|YP_678405.1| outer membrane protein 3a [Cytophaga hutchinsonii ATCC 33406]
gi|110280877|gb|ABG59063.1| outer membrane protein 3a [Cytophaga hutchinsonii ATCC 33406]
Length = 903
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
++ L + L +A NK P I + ++TD +GT N +S++R
Sbjct: 559 FENIYFDFNQSDLRPEAKKTLDELAAYSNKNPQIQIELNANTDGLGTDTYNRALSEKRGQ 618
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
YLI +GV +R + + + P+ +ND +VGRQ N+R+E I
Sbjct: 619 AAIDYLIGKGVDHSRIV-MNPLGKERPLTSNDNEVGRQLNRRVEFYIL 665
>gi|88705660|ref|ZP_01103370.1| outer membrane protein; OprF [Congregibacter litoralis KT71]
gi|88700173|gb|EAQ97282.1| outer membrane protein; OprF [Congregibacter litoralis KT71]
Length = 247
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 57/150 (38%), Gaps = 11/150 (7%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG----DMITCYIPVHVSFVSEVFLEKKF 92
D D+ + + G+ V G D + + L+ +
Sbjct: 104 DSDGDGVADYKDQCANTPE------GVKVDATGCPIKDEVVLTVDRLSFDFDSAALDAQS 157
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L ++ S + + +TD+ G + NL +S+ RA YL+ + +
Sbjct: 158 RAALDAAVAVIKSHSSVKMDVVGYTDTSGPEEYNLGLSKRRAQAAVDYLVSQ-GVDADQL 216
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ +NDT+ GR+ N+R+E+ +
Sbjct: 217 RATGRGEADPVASNDTRDGRERNRRVELVV 246
>gi|256839827|ref|ZP_05545336.1| outer membrane lipoprotein [Parabacteroides sp. D13]
gi|298375585|ref|ZP_06985542.1| OmpA family protein [Bacteroides sp. 3_1_19]
gi|256738757|gb|EEU52082.1| outer membrane lipoprotein [Parabacteroides sp. D13]
gi|298268085|gb|EFI09741.1| OmpA family protein [Bacteroides sp. 3_1_19]
Length = 428
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
V + ++ + + + I ++ P +++ HTDS G +N +S+ R++ I
Sbjct: 327 FDVGKSTIKPESMGEINRIVKLMTDNPDLRFSVEGHTDSTGNEASNQTLSEARSNAIVGK 386
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L++ S +S G PI N T GR N+R+E
Sbjct: 387 LVEL-GISADRLSASGKGQSSPIADNGTDEGRAKNRRVEFV 426
>gi|88857596|ref|ZP_01132239.1| probable outer membrane protein [Pseudoalteromonas tunicata D2]
gi|88820793|gb|EAR30605.1| probable outer membrane protein [Pseudoalteromonas tunicata D2]
Length = 293
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYIPVHV 80
K+ ++ D ++ + + +++D + + +
Sbjct: 128 AKLSATQAKDEAAQAQQNLYYAKQETAGAKQKVKDIQHQLDQLDARNSARGSVITLGDVL 187
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ ++ + L +AT LN I I+ HTD+IG+ K NLL+SQ RAD IK Y
Sbjct: 188 FDFNKSDIKPAAISHLAKLATFLNTNIDRNITIEGHTDNIGSKKFNLLLSQRRADSIKDY 247
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
LI +GV+ R I G P+ N T R+ N+R+E+ I
Sbjct: 248 LIGQGVARGR-IQTSGKGISLPVIDNTTADHREQNRRVEVII 288
>gi|150007641|ref|YP_001302384.1| outer membrane lipoprotein [Parabacteroides distasonis ATCC 8503]
gi|149936065|gb|ABR42762.1| outer membrane protein, putative OmpA domain protein
[Parabacteroides distasonis ATCC 8503]
Length = 445
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
V + ++ + + + I ++ P +++ HTDS G +N +S+ R++ I
Sbjct: 344 FDVGKSTIKPESMGEINRIVKLMTDNPDLRFSVEGHTDSTGNEASNQTLSEARSNAIVGK 403
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L++ S +S G PI N T GR N+R+E
Sbjct: 404 LVEL-GISADRLSASGKGQSSPIADNGTDEGRAKNRRVEFV 443
>gi|323490130|ref|ZP_08095350.1| flagellar motor protein MotB [Planococcus donghaensis MPA1U2]
gi|323396178|gb|EGA89004.1| flagellar motor protein MotB [Planococcus donghaensis MPA1U2]
Length = 256
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 68/174 (39%), Gaps = 9/174 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD----MITCY 75
+ E + + + ++ + L +++ + + G+ D +
Sbjct: 76 SPTAELSEDPVTGESPEEVFEAKDQEELLDFQNKIDTYIDENGLAPRLQTDMTRKGLKII 135
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLIS 130
I V F + K + I+ +L P +I I+ HTD++ N +S
Sbjct: 136 IKEGVLFESGSATILKGSEKITDEISNLLITDPPRMIFIEGHTDNVPAGTAEYPTNWELS 195
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA L++ S + S G++ PI +NDT GR N+R+E+ I P
Sbjct: 196 SARAINFMRNLLENDKLSPQKFSATGYSQYQPIASNDTPEGRAENRRVEVLISP 249
>gi|224540643|ref|ZP_03681182.1| hypothetical protein BACCELL_05557 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517715|gb|EEF86820.1| hypothetical protein BACCELL_05557 [Bacteroides cellulosilyticus
DSM 14838]
Length = 299
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +L++ + V + ++ + ++ + + ++ L IA I+ + + +
Sbjct: 145 REELKE--VDVKVLKGVVYISLADNMLYKSGSYEINERAGETLSKIAKIITDYKDYEVLV 202
Query: 114 QSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ +TD++ + NN +S RA + L + + +S G PI ND++
Sbjct: 203 EGNTDNVPISRTNIRNNWDLSALRASSVVQELQNKYGVDPKRLSAAGRGEYNPITDNDSE 262
Query: 170 VGRQNNQRIEIQIFPR 185
+G+Q N+R +I + PR
Sbjct: 263 LGKQRNRRTQIIVTPR 278
>gi|118581722|ref|YP_902972.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118504432|gb|ABL00915.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 180
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/168 (14%), Positives = 55/168 (32%), Gaps = 5/168 (2%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC K + + T+ A ++++T + +
Sbjct: 16 GCASNEVVKAEEPVVAPAQTEAPAVEVTQPAAPAAPVEAPKVEETA---KADSEAVAAAF 72
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIAT-ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
V + L + L A +L + + I+ H D G+ + N+ + + RA
Sbjct: 73 DVAYFDFDKSDLRQDARDALSKNADIMLKTNTAANVKIEGHCDERGSAEYNMALGERRAK 132
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
YL+ ++ +S+ + + P + N+R E +
Sbjct: 133 SALQYLLTL-GVPSQRLSIVSYGEEKPAAQGGNEEAWAKNRRTEFVVV 179
>gi|312963881|ref|ZP_07778352.1| hypothetical protein PFWH6_5800 [Pseudomonas fluorescens WH6]
gi|311281916|gb|EFQ60526.1| hypothetical protein PFWH6_5800 [Pseudomonas fluorescens WH6]
Length = 429
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 7/143 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFP 107
+ +++ + V D I F S + + P++ IA + K
Sbjct: 287 RLAGFLAEEIKAGRVAVEDKVDRSVVTIRGDELFASASASIVDDYQPLMLRIADAIRKVK 346
Query: 108 STVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + H+D+ +N +S+ RA + L + ++R S G + P+
Sbjct: 347 G-QVRVTGHSDNRPIATLRFPSNWALSEARAKSVLEILAAKTGQADR-FSAEGRSDTEPL 404
Query: 164 DTNDTKVGRQNNQRIEIQIFPRG 186
TN T GR N+R+EI + G
Sbjct: 405 ATNSTAEGRARNRRVEITVLAEG 427
>gi|311280379|ref|YP_003942610.1| peptidoglycan-associated lipoprotein [Enterobacter cloacae SCF1]
gi|308749574|gb|ADO49326.1| peptidoglycan-associated lipoprotein [Enterobacter cloacae SCF1]
Length = 173
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C G+ + Q
Sbjct: 6 VLKGLMIALPVM-AIAACSSNKNASNDQSGEGMMGAGTGMDANGN------GNMSSEEQA 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + I + + + F ML A L PS + ++ H D
Sbjct: 59 RLQMQQLQQNNIV------YFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 113 GTPEYNIALGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVL 171
Query: 181 Q 181
Sbjct: 172 V 172
>gi|294631150|ref|ZP_06709710.1| secreted protein [Streptomyces sp. e14]
gi|292834483|gb|EFF92832.1| secreted protein [Streptomyces sp. e14]
Length = 215
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ + ++D G R + L + + IA + K +T
Sbjct: 78 DIKSVVEDQGGEERREDTNTDVTFALQAEVLFPKDSAKLSDQAKSRIDAIAQEIKKQHAT 137
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ + TD++G+ ++ +++S++RA+ ++ L Q + VRG+A YPI N T+
Sbjct: 138 QVRVFGFTDNLGSHEHGVVLSKQRANAVQDVLSQELNDPDITFDVRGYAEDYPIADNSTE 197
Query: 170 VGRQNNQRIEIQ 181
GR+ N+R+E+
Sbjct: 198 DGRKKNRRVEVT 209
>gi|224373185|ref|YP_002607557.1| OmpA/MotB [Nautilia profundicola AmH]
gi|223588582|gb|ACM92318.1| OmpA/MotB [Nautilia profundicola AmH]
Length = 258
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 76/195 (38%), Gaps = 13/195 (6%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT--- 61
+G ++ + G + ++ + + + L +A EF+
Sbjct: 49 IGSLAGALSVLEGGTQTEVSRNRIQKATPIEKTDETAQTVNKLSQAVAEFRQFTAGGKGP 108
Query: 62 GIVVSRIGDMITCYIPVHVSF-VSEVFLE-KKFLPMLQLIATILNKF--PSTVIAIQSHT 117
IV+ + +P ++F + + L L+ IA I+ ++ + I I+ +T
Sbjct: 109 AIVLEEGEEGFFIRLPADITFKPGSAQITDEDSLLFLKRIALIIKEYLPKNIEIQIKGYT 168
Query: 118 DSIGT-----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
D+ +N +S RA + LI + + + +S + +PI N T GR
Sbjct: 169 DNQPPPPTSPYADNWELSAARALSVLKILI-KDGVNPKQLSAAAYGEYHPIAANATPEGR 227
Query: 173 QNNQRIEIQIFPRGN 187
N+R+EI F +
Sbjct: 228 AKNRRVEIWFFSKKK 242
>gi|157826223|ref|YP_001493943.1| peptidoglycan-associated lipoprotein precursor [Rickettsia akari
str. Hartford]
gi|157800181|gb|ABV75435.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia akari
str. Hartford]
Length = 155
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 63/182 (34%), Gaps = 30/182 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ L+ + ++GC R K + + + K F +
Sbjct: 1 MKTKITLAFLALFVLAGCNTTKRTVKMDGMMSQCEETSLMKDF------------EKHAG 48
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ L K L+ A L+K P ++ H D
Sbjct: 49 NAVW----------------FAFDSSSLSPKAKEELERQACWLSKHPEVKATVEGHCDER 92
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IE 179
GT + NL + + RA+ K +L+ +G+ +R ++ + P +T+ N+R +
Sbjct: 93 GTREYNLGLGERRAEAAKKFLVHKGIDHSRLNTIS-YGKDRPAMIGNTEEAFAYNRRAVT 151
Query: 180 IQ 181
+
Sbjct: 152 VV 153
>gi|70733365|ref|YP_263140.1| hypothetical protein PFL_6082 [Pseudomonas fluorescens Pf-5]
gi|68347664|gb|AAY95270.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 441
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 7/143 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFP 107
+ ++ + V D I F S + + P++ IA + K
Sbjct: 299 RLAGFLAEDIKAGRVAVEDAVDRSVVTIRGDELFASASASILDDYQPLMLRIADAVRKVK 358
Query: 108 STVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ I H+D+ +N +SQ RA+ + L + R S G + P+
Sbjct: 359 G-QVRITGHSDNRPIATLRFPSNWKLSQARAESVLQILAAKTGQPER-FSAEGRSDTEPL 416
Query: 164 DTNDTKVGRQNNQRIEIQIFPRG 186
TN T GR N+R+EI + G
Sbjct: 417 ATNATAEGRARNRRVEISVLAEG 439
>gi|300023765|ref|YP_003756376.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299525586|gb|ADJ24055.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 716
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ L L+ + + N+ PS I I+ HTD+ GT + N +S RA +
Sbjct: 613 FERAKADLTSDSTQTLRDLVEVANECPSFSIEIEGHTDAEGTDERNQRLSDRRARAVAD- 671
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + S R +S G+ P+ N T+ GR N+RIE +
Sbjct: 672 FLTQNGVSARRLSTIGYGATRPVADNATETGRAKNRRIEFNV 713
>gi|319778881|ref|YP_004129794.1| Outer membrane protein ImpK/VasF, OmpA/MotB domain protein
[Taylorella equigenitalis MCE9]
gi|317108905|gb|ADU91651.1| Outer membrane protein ImpK/VasF, OmpA/MotB domain protein
[Taylorella equigenitalis MCE9]
Length = 445
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 69/196 (35%), Gaps = 12/196 (6%)
Query: 5 LGLSMFIMTTIS---GCGLASREKK--KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
L++ + S G K+ V + + +++
Sbjct: 230 FALAVLVYILFSWLLGGKSDDVAYDIVKIKPPAMQIAVPVRVVRTEGPKRLAQYLESEIR 289
Query: 60 DTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + V D + F ++K+F ++ + L++ I I HTD
Sbjct: 290 ENLLTVRDESDRSVVELRGDEFFESGSADIKKQFESVVNRLGDALDETEG-NILITGHTD 348
Query: 119 SIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ N +SQ RAD + + R NR I G A P+ +NDT R+
Sbjct: 349 NRPIKTIRFPSNWDLSQARADAVAKIIESRLTQPNR-IRSEGKADTMPVTSNDTPENRKR 407
Query: 175 NQRIEIQIFPRGNIKK 190
N+R+EI + KK
Sbjct: 408 NRRVEITLLIPAQSKK 423
>gi|293608672|ref|ZP_06690975.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829245|gb|EFF87607.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 473
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 4/156 (2%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
S + + +SL ++ + + V+ + + I
Sbjct: 320 PHTEVVSTAPETAEQSVSNSLTASQTAL-GSIDPNNVDVNALVKALNLQIIN--FASGSS 376
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ +L AT+LNK + + HTDS G N +SQ RA + YLI +GV
Sbjct: 377 DIPADNKAILDQAATLLNKVSGVKLNVGGHTDSTGNAAANKALSQRRAQAVVDYLISKGV 436
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + +G P+ N T+ GR N+RIE +
Sbjct: 437 DGTKLV-AQGHGSDQPVAENTTEEGRFKNRRIEFSV 471
>gi|256028784|ref|ZP_05442618.1| Outer membrane protein [Fusobacterium sp. D11]
Length = 191
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ +L+ I + + + I I HTDSIG+ + N +S+
Sbjct: 63 IVLDERSLNFDFDKSIVKAQYFDLLKNIKEFVEQN-NYEITIVGHTDSIGSNQYNFGLSR 121
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
RA+ +K+ L++ G++ +R + + + PI TN TK GR N+R+E ++ R +++
Sbjct: 122 RRAEAVKAKLLEFGLAEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQREAVQE 180
>gi|255530915|ref|YP_003091287.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255343899|gb|ACU03225.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 175
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ L+ +L IA + K P+ + H+ G+ +N+ +S +RA
Sbjct: 67 NFSNVQFEFNSGVLKTASFEVLDRIAAEMKKDPAVKFVLNGHSSIEGSAAHNMSLSVDRA 126
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + S +S++G+ P+ +N T+ G+ N+R+E +
Sbjct: 127 NSV-KLYLVNAGVSAANLSIKGYGATQPVASNSTEEGKAQNRRVEFK 172
>gi|153807056|ref|ZP_01959724.1| hypothetical protein BACCAC_01333 [Bacteroides caccae ATCC 43185]
gi|149130176|gb|EDM21386.1| hypothetical protein BACCAC_01333 [Bacteroides caccae ATCC 43185]
Length = 278
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 5/132 (3%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + + + F L+K+ L +A +LNK + I+ HT
Sbjct: 134 SSDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALGKLAEVLNKQTDIDVFIEGHT 193
Query: 118 DSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
D+ K+N +S RA + LI+ + I G P+D N+T GR
Sbjct: 194 DNKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQPSGRGEYMPVDDNETAEGRS 253
Query: 174 NNQRIEIQIFPR 185
N+R EI + P+
Sbjct: 254 KNRRTEIIMAPK 265
>gi|167034899|ref|YP_001670130.1| flagellar motor protein MotD [Pseudomonas putida GB-1]
gi|166861387|gb|ABY99794.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 285
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K ++ + D D F + + V I + + F
Sbjct: 84 KDSEQTEAGLAATNVDPLKTISDDVRDAFGDLINSNQMTVRGNELWIEIELNSSLLFGSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K ++ +A IL F + + ++ TD++ N +S RA I
Sbjct: 144 DAMPSDKAFAIIDKVANILKPFAN-PVHVEGFTDNLPIRTAQYPTNWELSSARAASIVRL 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV+ R SV G+ P+ +NDT GR N+R+ + I +++
Sbjct: 203 LAMEGVNPARMASV-GYGEYQPVASNDTADGRARNRRVVLVISRNLEVRR 251
>gi|91786221|ref|YP_547173.1| Type I secretion outer membrane protein TolC [Polaromonas sp.
JS666]
gi|91695446|gb|ABE42275.1| Type I secretion outer membrane protein, TolC [Polaromonas sp.
JS666]
Length = 607
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 4/167 (2%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-- 77
A + + ++ +++K + + + V G + I
Sbjct: 435 SAQDAGQDRTGIDPAELCPQDETVVDTMEKIKAGTVIPPRARATVAPAPGQALPAKISLS 494
Query: 78 -VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + ++ L + L V+ HTDS+GT N +S RAD
Sbjct: 495 ADTLFDFDKSTIKAGGTGKLDALVDRLKGVNVDVVIAVGHTDSVGTDAYNQRLSLARADS 554
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+K+YL+ +GV R I G P+ N T GR N+R++I++
Sbjct: 555 VKAYLVSKGVDRQR-IRTEGRGESQPVADNATAEGRAKNRRVDIEVV 600
>gi|115350445|ref|YP_772284.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115280433|gb|ABI85950.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 316
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 13/147 (8%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV------------SFVSEVFLEKKFLPM 95
+ + + +T I + + L + +
Sbjct: 169 EAQRQQLASDMANTLNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGRQI 228
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +A L+K + + I HTD+ G +N+ +SQ RAD +K YLI + + ++
Sbjct: 229 LDQMAAALSKLQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKS-IPPQQMTTT 287
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI NDT GR N+RIE ++
Sbjct: 288 GVGPDQPIAPNDTADGRARNRRIEFRV 314
>gi|171914446|ref|ZP_02929916.1| OmpA/MotB [Verrucomicrobium spinosum DSM 4136]
Length = 323
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 51/109 (46%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + ++ + P L +A ++ + P+ + + HTD++G + N +S+
Sbjct: 213 RVTLHGVFFDTNRTEVKPESKPALDEVAKLMTEDPALKVLVVGHTDTVGGFEPNRSLSER 272
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA + + L + S + G +Y P TN T+ GR N+R+E+
Sbjct: 273 RAAAVVAELKAKYGISAERLFSFGVSYAAPAATNSTEEGRAQNRRVELV 321
>gi|188584571|ref|YP_001928016.1| peptidoglycan-associated lipoprotein [Methylobacterium populi
BJ001]
gi|179348069|gb|ACB83481.1| peptidoglycan-associated lipoprotein [Methylobacterium populi
BJ001]
Length = 170
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 54/174 (31%), Gaps = 25/174 (14%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L L++ + C S + +
Sbjct: 11 SLTLALCAALGLGACSKDSDLADASGFGANGAGGVARPGSAQDF---------------- 54
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V +GD + L L A+ L ++P I+ H D GT
Sbjct: 55 -VVNVGDRV-------FFESDSTDLTPTATATLDKQASWLQRYPRYSFLIEGHADERGTR 106
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N + RA ++ YL RG+S++R +V + + P+ + N+R
Sbjct: 107 EYNYSLGARRAQTVQDYLASRGISASRMRTVS-YGKERPVAVCNDISCWSQNRR 159
>gi|26991025|ref|NP_746450.1| flagellar motor protein MotD [Pseudomonas putida KT2440]
gi|24986055|gb|AAN69914.1|AE016630_5 flagellar motor protein MotB [Pseudomonas putida KT2440]
Length = 285
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 65/170 (38%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K ++ + D D F + + V I + + F
Sbjct: 84 KDSEQTEAGLAATNVDPLKTISDDVRDAFGDLINSDQMTVRGNELWIEIELNSSLLFGSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K +++ +A+IL F + + ++ TD++ N +S RA I
Sbjct: 144 DAMPSDKAFAIIEKVASILKPFAN-PVHVEGFTDNLPIRTAQYPTNWELSSARAASIVRL 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV+ R SV G+ P+ +NDT GR N+R+ + I +++
Sbjct: 203 LAMEGVNPARMASV-GYGEYQPVASNDTAEGRARNRRVVLVISRNLEVRR 251
>gi|325068010|ref|ZP_08126683.1| OmpA/MotB domain protein [Actinomyces oris K20]
Length = 411
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 66/188 (35%), Gaps = 2/188 (1%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + M T+S S ++ + L + + + + L D+
Sbjct: 41 VFVPMAGFVTVSVLESGSAQQANIDLSAAQTELDTLPNTTLAASAPIERYTRSLDDSTST 100
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTL 123
+ D+ L LQ + L ++P + I HTD +
Sbjct: 101 HTGGKDITVTLASDVTFASDSADLASGAETQLQTVVGQLGQYPDGGTLTIVGHTDDVQDD 160
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S++RA+ +K+ L Q SV G P + T R N+R+EI +
Sbjct: 161 AYNQTLSEKRANAVKTRLEQLTKLDKWQTSVSGKGESQPKINDTTDQARAANRRVEITLT 220
Query: 184 PR-GNIKK 190
P G KK
Sbjct: 221 PTSGTTKK 228
>gi|300313316|ref|YP_003777408.1| lipoprotein [Herbaspirillum seropedicae SmR1]
gi|300076101|gb|ADJ65500.1| lipoprotein [Herbaspirillum seropedicae SmR1]
Length = 267
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 6/162 (3%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHV 80
+ V + + ++ S + A + + G+ VS + V
Sbjct: 107 DGTNVSISGEVSHEAQRQQIASDM--ATSLNSSYIINNGLRVSTSEQGVLDNTLANRVVS 164
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L + +L IA + + + I +TD+ G +N+ +S RAD +K+Y
Sbjct: 165 FESGRATLTPEGKRILDEIAATMLQLKGRRVEIIGNTDNEGLRASNISLSLARADAVKAY 224
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L + + ++ G P+ +N T GR N+RIE +I
Sbjct: 225 LSTK-GVDDSLLTTSGQGPDRPVASNATSEGRARNRRIEFRI 265
>gi|15893123|ref|NP_360837.1| peptidoglycan-associated lipoprotein precursor [Rickettsia conorii
str. Malish 7]
gi|15620330|gb|AAL03738.1| peptidoglycan-associated lipoprotein precursor [Rickettsia conorii
str. Malish 7]
Length = 155
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 30/182 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ L+ + ++GC R + ++ + K F +
Sbjct: 1 MKTKITLAFLALCVLAGCNTTKRAPQFDGNMNQSEETSLMKDF------------EKHAG 48
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ L K L+ A L+K P + ++ H D
Sbjct: 49 NAVW----------------FAFDSSALSPKAKEELERQACWLSKHPEVKVTVEGHCDER 92
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IE 179
GT + NL + + RA K +L +G+ NR ++ + P +T+ N+R +
Sbjct: 93 GTKEYNLGLGERRAAAAKKFLAHKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVT 151
Query: 180 IQ 181
+
Sbjct: 152 VV 153
>gi|255261508|ref|ZP_05340850.1| OmpA family domain protein [Thalassiobium sp. R2A62]
gi|255103843|gb|EET46517.1| OmpA family domain protein [Thalassiobium sp. R2A62]
Length = 308
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 60/175 (34%), Gaps = 4/175 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
+ +S S + A + D G + G
Sbjct: 136 VVSLMVSRTSTRGFVDVTRVGP-SGSAVAQSSAPAVRATVARTDAAAVPDDFGAALETDG 194
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ V L L L+A L+ P+ IA+ HTDS G L N+ +
Sbjct: 195 ---RVVLSDLAFQVGSSNLGDAAFASLDLLAEYLSANPNKTIALVGHTDSSGPLNGNIAL 251
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S+ RA + L + R + G Y P+ TN T+ GR N+R+E+ +
Sbjct: 252 SKRRASSVLDRLTRDYGIPRRQMEAEGMGYLSPLSTNLTQEGRDLNRRVEVIVTS 306
>gi|126726180|ref|ZP_01742022.1| OmpA/MotB family protein [Rhodobacterales bacterium HTCC2150]
gi|126705384|gb|EBA04475.1| OmpA/MotB family protein [Rhodobacterales bacterium HTCC2150]
Length = 305
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
T VS + D + + L L+ +A +L + P + HTD++
Sbjct: 180 TETPVSTVSDDGVLVLEDLLFQPGSADLTAGDYASLENLAALLKENPEKKAILVGHTDAV 239
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G L+ N+ IS++RA + + ++++ S +S +G + P +NDT GRQ N+R+
Sbjct: 240 GALEVNIAISEKRAISVMTRMVEQYEISADRLSAKGVGFLAPRASNDTDEGRQKNRRVVA 299
Query: 181 QIF 183
+
Sbjct: 300 IMT 302
>gi|113971301|ref|YP_735094.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113885985|gb|ABI40037.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 372
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 49/109 (44%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++K++ ++ +A LNK P + I H ++G N+ +S +RA
Sbjct: 255 DVGSIQFANDSAVVKKEYYKDIERLANYLNKNPEFTVEIAGHASNVGKPDYNMTLSDKRA 314
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
D + L+++ S ++ G+ P+ D+K N+RIE +
Sbjct: 315 DAVAKILVEKYGISQSRVTSNGYGITKPLVAGDSKEAHAANRRIEAIVT 363
>gi|330824570|ref|YP_004387873.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
K601]
gi|329309942|gb|AEB84357.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
Length = 219
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + L + + + VI HTDSIGT N +S RA+ +
Sbjct: 110 DAFFDFDKSVLKPEGKAKLDDLVSKVKGINLEVIIAVGHTDSIGTDAYNQKLSVRRAEAV 169
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + + G K PI N TK GR N+R+EI++
Sbjct: 170 KAYLVSK-GIEKNRVYTEGKGEKQPIADNKTKEGRAKNRRVEIEVV 214
>gi|312130358|ref|YP_003997698.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311906904|gb|ADQ17345.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 444
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V+ ++ + +++ IAT+L + + I HTDS G K+NL +SQ+RA
Sbjct: 338 RGITFDVNSDKIKPESYGVIKEIATVLQENSGIRVKIVGHTDSDGDDKSNLTLSQKRAAS 397
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+K++L + G P + N T G+ NN+R+E
Sbjct: 398 VKNFLTSEFKIDAERLETEGKGESEPSEPNTTPQGKANNRRVEFI 442
>gi|296101897|ref|YP_003612043.1| type VI secretion system protein ImpK [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295056356|gb|ADF61094.1| type VI secretion system protein ImpK [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 412
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 53/135 (39%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFL-EKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V D + F S + ++ P++ IA +N I
Sbjct: 263 LKPEIDAGLVAVKDEADRSVVILKGDGLFASASTVVRDRYEPVINRIAQAMNNVSG-KIL 321
Query: 113 IQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ ++D++ +N +S +RA ++ L +R + G P+ N+T
Sbjct: 322 VVGYSDNVPIRSARFASNYELSLDRARSVQKMLQGSLSQPDR-VKAEGRGEINPVAPNNT 380
Query: 169 KVGRQNNQRIEIQIF 183
R N+R+EI +
Sbjct: 381 PENRARNRRVEITLL 395
>gi|163753146|ref|ZP_02160270.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Kordia algicida OT-1]
gi|161326878|gb|EDP98203.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Kordia algicida OT-1]
Length = 543
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D + ++L + + + + I ++ L+ + L I +LN+ P
Sbjct: 405 DDFKHTVTIKLPQAKAEIVKEDEKLMIKIENIYFDYNKWMLKDESTLSLNKIIDVLNENP 464
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I +HTD+ G N +S +RA ++YL++ G+ ++R IS G+ PI+
Sbjct: 465 EMKIEINAHTDNRGRATYNSKLSNKRAASARAYLLKNGIDASRVIS-NGYGESQPIEDCG 523
Query: 168 T---KVGRQNNQRIEIQIF 183
T + + N+RIE I
Sbjct: 524 TKCSEAQHETNRRIEFLIV 542
>gi|148546771|ref|YP_001266873.1| flagellar motor protein MotD [Pseudomonas putida F1]
gi|148510829|gb|ABQ77689.1| OmpA/MotB domain protein [Pseudomonas putida F1]
gi|313497822|gb|ADR59188.1| Flagellar motor protein MotD [Pseudomonas putida BIRD-1]
Length = 285
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K ++ + D D F + + V + + + F
Sbjct: 84 KDSEQTEAGLAATNVDPLKTISDDVRDAFGDLINSDQMTVRGNELWVEIELNSSLLFGSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K +++ +A IL F + + ++ TD++ N +S RA I
Sbjct: 144 DAMPSDKAFAIIEKVANILKPFAN-PVHVEGFTDNLPIRTAQYPTNWELSSARAASIVRL 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV+ R SV G+ P+ +NDT GR N+R+ + I +++
Sbjct: 203 LAMEGVNPARMASV-GYGEYQPVASNDTAEGRARNRRVVLVISRNLEVRR 251
>gi|327481242|gb|AEA84552.1| flagellar motor protein MotD [Pseudomonas stutzeri DSM 4166]
Length = 278
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 67/177 (37%), Gaps = 11/177 (6%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ----LQDTGIVVSRIGDMITCYIPV 78
+ V + + L++ + + + + + I +
Sbjct: 75 TTEPDVSQVEDLTGPGSGEPTLDPLERIAQSMRETFGELIANDQLTIRGNELWIEIELSS 134
Query: 79 HVSFVSEVFL-EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQER 133
+ F S L + ++ +A IL F + ++ TD++ + N +S R
Sbjct: 135 SLLFPSGDALPNNQAFQLIDKVAGILAPF-DNPVHVEGFTDNLPISTDKFPTNWELSAAR 193
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + L +GV+ +R ++ G+ P+ N T GR N+R+ + + ++++
Sbjct: 194 AGSVVRMLAAQGVNPSR-LAAVGYGEFQPVADNATAEGRARNRRVVLVVSRNLDVRR 249
>gi|239946700|ref|ZP_04698453.1| peptidoglycan-associated lipoprotein [Rickettsia endosymbiont of
Ixodes scapularis]
gi|239920976|gb|EER21000.1| peptidoglycan-associated lipoprotein [Rickettsia endosymbiont of
Ixodes scapularis]
Length = 155
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 55/182 (30%), Gaps = 30/182 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ L+ + ++GC R + + + K F +
Sbjct: 1 MKTKITLAFLALFVLAGCNTTKRAPQFDGNMNQGEETSLMKDF------------EKHAG 48
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ L K L+ A L+K P I+ H D
Sbjct: 49 NAVW----------------FAFDSSALSPKAKEELERQACWLSKHPEVKATIEGHCDER 92
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IE 179
GT + NL + + RA + + + ++ + P +T+ N+R +
Sbjct: 93 GTREYNLGLGERRAA-VAKKFLANKGIDHNRLNTISYGKDRPAMMGNTEEAFAYNRRAVT 151
Query: 180 IQ 181
+
Sbjct: 152 VV 153
>gi|86608243|ref|YP_477005.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556785|gb|ABD01742.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 357
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 66/172 (38%), Gaps = 6/172 (3%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD----KAEDEFQMQLQDTGIVVSRIG 69
+S + + + ++ + +D + E + I +
Sbjct: 180 FVSAYFVVNTDDWEITRGSGQIPTGITLGRVDVVDVKPRQQRLELVESITSGEINQAISR 239
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
D + + +E P L IA ++ + I + HTD+ G+ NL +
Sbjct: 240 DG-RIALYGILFAYDSDQIEAAAEPTLAEIAKLMRERTDLSILVVGHTDATGSFDYNLGL 298
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S+ RA+ + + L+ + R + G + P+ +N T+ GR N+R+E+
Sbjct: 299 SRRRAEAVVNRLV-QLGIEQRRLYPVGVGFSAPVASNTTEEGRAKNRRVELV 349
>gi|28869391|ref|NP_792010.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213968194|ref|ZP_03396339.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
gi|301383801|ref|ZP_07232219.1| ompA family protein [Pseudomonas syringae pv. tomato Max13]
gi|302060757|ref|ZP_07252298.1| ompA family protein [Pseudomonas syringae pv. tomato K40]
gi|302131856|ref|ZP_07257846.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28852632|gb|AAO55705.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213927174|gb|EEB60724.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
gi|331018607|gb|EGH98663.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 271
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + ++ + + + L+ + + L
Sbjct: 126 ASAQQQGRWLEDQILS--LATTQTDRGLVMTLGDVLFDAGHAELKSSASRTILKVVQFLQ 183
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P V+ I+ +TDS G ++NL +S++RA + ++ ++ I V G+ ++P+D
Sbjct: 184 INPRRVVRIEGYTDSTGDREDNLTLSKDRAQAVAD-VLMDLGVDDKRIQVEGYGQQFPVD 242
Query: 165 TNDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 243 ANASERGRAQNRRVEIV 259
>gi|163732848|ref|ZP_02140293.1| OmpA domain protein [Roseobacter litoralis Och 149]
gi|161394208|gb|EDQ18532.1| OmpA domain protein [Roseobacter litoralis Och 149]
Length = 176
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ L + IA +L + +Q HTDS G + N +SQ RA + +
Sbjct: 48 FEPGSATIDAAALTTMDQIADVLRVCGDLKLEVQGHTDSQGREEMNRSLSQARAQSVLNE 107
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L R V ++ FI +G+ PI NDT+ GR+ N+RIE ++
Sbjct: 108 LRARKVLTSNFI-AKGYGEANPIADNDTEEGREANRRIEFKLI 149
>gi|325121508|gb|ADY81031.1| hypothetical protein BDGL_000445 [Acinetobacter calcoaceticus
PHEA-2]
Length = 475
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 61/156 (39%), Gaps = 4/156 (2%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
S + + +SL ++ + + V+ + + I
Sbjct: 322 PHTEVVSTAPETAEQSVSNSLTASQTAL-GSIDPNNVDVNALVKALNLQIIN--FASGSS 378
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ +L AT+LNK + + HTDS G N +SQ RA + YL +GV
Sbjct: 379 DIPADNKAILDQAATLLNKVNGVKLNVGGHTDSTGNAAANKALSQRRAQAVVDYLTSKGV 438
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ + +G P+ N T+ GR N+RIE +
Sbjct: 439 EGSKLV-AQGHGSDQPVAENTTEEGRFKNRRIEFSV 473
>gi|310822654|ref|YP_003955012.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309395726|gb|ADO73185.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 653
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ + + + V D + + ++ P+L + ++ + +
Sbjct: 525 DLKPAPKKKLVTV---ADNKLALLQQVQFADGKAVIQANSQPLLAQVVDVIVRNNIQRVR 581
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+++HTD+ G NL +SQERA + ++L Q G+ + R V+G+ PI N T G+
Sbjct: 582 VEAHTDNQGNPAANLKLSQERAQAVATFLAQSGLDAARM-EVQGYGDARPIAPNLTPRGK 640
Query: 173 QNNQRIEIQIFPR 185
+ N+R+E I +
Sbjct: 641 ELNRRVEFIILEQ 653
>gi|261252511|ref|ZP_05945084.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
orientalis CIP 102891]
gi|260935902|gb|EEX91891.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
orientalis CIP 102891]
Length = 176
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 71/182 (39%), Gaps = 13/182 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-SSLDKAEDEFQMQLQ 59
++K L +++ + ++ C + ++N T +V+ + +D + +L+
Sbjct: 6 VLKGLLIALPV-LAVTACSSSDDAANASGSTETNQTQVVDNNTAVTPIDANGQLTEQELK 64
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + ++ + + ML A L+K P+ + I+ H D
Sbjct: 65 EQALRETQT----------IYFAFDNSTIAGDYEEMLAAHAAYLSKNPALEVTIEGHADE 114
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N+ + + RA+ + YL IS+ + + P+ ++ N+R
Sbjct: 115 RGTPEYNIALGERRANAVAKYLQAL-GVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAV 173
Query: 180 IQ 181
+
Sbjct: 174 LV 175
>gi|115376409|ref|ZP_01463646.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|115366616|gb|EAU65614.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
Length = 723
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ + + + V D + + ++ P+L + ++ + +
Sbjct: 595 DLKPAPKKKLVTV---ADNKLALLQQVQFADGKAVIQANSQPLLAQVVDVIVRNNIQRVR 651
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+++HTD+ G NL +SQERA + ++L Q G+ + R V+G+ PI N T G+
Sbjct: 652 VEAHTDNQGNPAANLKLSQERAQAVATFLAQSGLDAARM-EVQGYGDARPIAPNLTPRGK 710
Query: 173 QNNQRIEIQIFPR 185
+ N+R+E I +
Sbjct: 711 ELNRRVEFIILEQ 723
>gi|24375049|ref|NP_719092.1| OmpA family protein [Shewanella oneidensis MR-1]
gi|24349795|gb|AAN56536.1|AE015790_7 OmpA family protein [Shewanella oneidensis MR-1]
Length = 370
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 51/109 (46%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++K++ ++ +A +NK P + I H ++G + N+++S +RA
Sbjct: 253 DVGSIQFANDSAVVKKEYYKDIERLANYMNKNPEFTVEIAGHASNVGKPEYNMVLSDKRA 312
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
D + L+++ S ++ G+ P+ ++K N+RIE +
Sbjct: 313 DAVAKILVEKYGISQSRVTSNGYGITKPLVAGNSKEAHAANRRIEAIVT 361
>gi|15800457|ref|NP_286469.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 EDL933]
gi|15830030|ref|NP_308803.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 str. Sakai]
gi|16128716|ref|NP_415269.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli str. K-12 substr. MG1655]
gi|30062096|ref|NP_836267.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
flexneri 2a str. 2457T]
gi|56479690|ref|NP_706493.2| peptidoglycan-associated outer membrane lipoprotein [Shigella
flexneri 2a str. 301]
gi|74311265|ref|YP_309684.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
sonnei Ss046]
gi|82543168|ref|YP_407115.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
boydii Sb227]
gi|89107599|ref|AP_001379.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli str. K-12 substr. W3110]
gi|110804633|ref|YP_688153.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
flexneri 5 str. 8401]
gi|157157682|ref|YP_001461902.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli E24377A]
gi|157160223|ref|YP_001457541.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli HS]
gi|170020914|ref|YP_001725868.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli ATCC 8739]
gi|170080408|ref|YP_001729728.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli str. K-12 substr. DH10B]
gi|170683065|ref|YP_001742852.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli SMS-3-5]
gi|187731438|ref|YP_001879398.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
boydii CDC 3083-94]
gi|188492398|ref|ZP_02999668.1| peptidoglycan-associated lipoprotein [Escherichia coli 53638]
gi|189010018|ref|ZP_02804243.2| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4076]
gi|189402679|ref|ZP_02784049.2| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4401]
gi|189402925|ref|ZP_03006899.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4486]
gi|189404924|ref|ZP_02811914.2| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC869]
gi|194430753|ref|ZP_03063168.1| peptidoglycan-associated lipoprotein [Escherichia coli B171]
gi|194440229|ref|ZP_03072261.1| peptidoglycan-associated lipoprotein [Escherichia coli 101-1]
gi|195936736|ref|ZP_03082118.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 str. EC4024]
gi|208815415|ref|ZP_03256594.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4045]
gi|208822195|ref|ZP_03262514.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4042]
gi|209396423|ref|YP_002269375.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4115]
gi|209917992|ref|YP_002292076.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli SE11]
gi|217326423|ref|ZP_03442507.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
TW14588]
gi|218553268|ref|YP_002386181.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli IAI1]
gi|218694165|ref|YP_002401832.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli 55989]
gi|218699113|ref|YP_002406742.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli IAI39]
gi|218704068|ref|YP_002411587.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli UMN026]
gi|238900006|ref|YP_002925802.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli BW2952]
gi|253774288|ref|YP_003037119.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|254160811|ref|YP_003043919.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli B str. REL606]
gi|254791898|ref|YP_003076735.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 str. TW14359]
gi|256021183|ref|ZP_05435048.1| peptidoglycan-associated outer membrane lipoprotein [Shigella sp.
D9]
gi|256023656|ref|ZP_05437521.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
sp. 4_1_40B]
gi|260842947|ref|YP_003220725.1| peptidoglycan-associated outer membrane lipoprotein Pal
[Escherichia coli O103:H2 str. 12009]
gi|260853976|ref|YP_003227867.1| peptidoglycan-associated outer membrane lipoprotein Pal
[Escherichia coli O26:H11 str. 11368]
gi|260866872|ref|YP_003233274.1| peptidoglycan-associated outer membrane lipoprotein Pal
[Escherichia coli O111:H- str. 11128]
gi|261224452|ref|ZP_05938733.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 str. FRIK2000]
gi|261254556|ref|ZP_05947089.1| peptidoglycan-associated outer membrane lipoprotein Pal
[Escherichia coli O157:H7 str. FRIK966]
gi|291281684|ref|YP_003498502.1| Peptidoglycan-associated lipoprotein precursor [Escherichia coli
O55:H7 str. CB9615]
gi|293403996|ref|ZP_06647990.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli FVEC1412]
gi|293409125|ref|ZP_06652701.1| conserved hypothetical protein [Escherichia coli B354]
gi|293414026|ref|ZP_06656675.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli B185]
gi|293433009|ref|ZP_06661437.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli B088]
gi|297520454|ref|ZP_06938840.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli OP50]
gi|298379776|ref|ZP_06989381.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli FVEC1302]
gi|300816391|ref|ZP_07096613.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 107-1]
gi|300822970|ref|ZP_07103105.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 119-7]
gi|300900748|ref|ZP_07118897.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 198-1]
gi|300907000|ref|ZP_07124669.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 84-1]
gi|300918402|ref|ZP_07135002.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 115-1]
gi|300926145|ref|ZP_07141958.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 182-1]
gi|300929453|ref|ZP_07144921.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 187-1]
gi|300937786|ref|ZP_07152583.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 21-1]
gi|300947178|ref|ZP_07161388.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 116-1]
gi|300957690|ref|ZP_07169879.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 175-1]
gi|301020787|ref|ZP_07184851.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 69-1]
gi|301027077|ref|ZP_07190449.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 196-1]
gi|301305229|ref|ZP_07211327.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 124-1]
gi|301327934|ref|ZP_07221105.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 78-1]
gi|301648046|ref|ZP_07247813.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 146-1]
gi|307137354|ref|ZP_07496710.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli H736]
gi|307314794|ref|ZP_07594388.1| peptidoglycan-associated lipoprotein [Escherichia coli W]
gi|309797456|ref|ZP_07691848.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 145-7]
gi|312970820|ref|ZP_07784999.1| peptidoglycan-associated lipoprotein [Escherichia coli 1827-70]
gi|331662101|ref|ZP_08363024.1| peptidoglycan-associated lipoprotein [Escherichia coli TA143]
gi|331667108|ref|ZP_08367973.1| peptidoglycan-associated lipoprotein [Escherichia coli TA271]
gi|71159616|sp|P0A913|PAL_ECO57 RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
Precursor
gi|71159617|sp|P0A912|PAL_ECOLI RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
Precursor
gi|71159618|sp|P0A914|PAL_SHIFL RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
Precursor
gi|12513674|gb|AAG55077.1|AE005252_13 peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EDL933]
gi|41360|emb|CAA46673.1| peptidoglycan-associated lipoprotein [Escherichia coli K-12]
gi|42257|emb|CAA28771.1| unnamed protein product [Escherichia coli K-12]
gi|1651333|dbj|BAA35407.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli str. K12 substr. W3110]
gi|1786962|gb|AAC73835.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli str. K-12 substr. MG1655]
gi|13360235|dbj|BAB34199.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
Sakai]
gi|30040340|gb|AAP16073.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2a str.
2457T]
gi|56383241|gb|AAN42200.2| peptidoglycan-associated lipoprotein [Shigella flexneri 2a str.
301]
gi|73854742|gb|AAZ87449.1| peptidoglycan-associated lipoprotein [Shigella sonnei Ss046]
gi|81244579|gb|ABB65287.1| peptidoglycan-associated lipoprotein [Shigella boydii Sb227]
gi|110614181|gb|ABF02848.1| peptidoglycan-associated lipoprotein [Shigella flexneri 5 str.
8401]
gi|157065903|gb|ABV05158.1| peptidoglycan-associated lipoprotein [Escherichia coli HS]
gi|157079712|gb|ABV19420.1| peptidoglycan-associated lipoprotein [Escherichia coli E24377A]
gi|169755842|gb|ACA78541.1| peptidoglycan-associated lipoprotein [Escherichia coli ATCC 8739]
gi|169888243|gb|ACB01950.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli str. K-12 substr. DH10B]
gi|170520783|gb|ACB18961.1| peptidoglycan-associated lipoprotein [Escherichia coli SMS-3-5]
gi|187428430|gb|ACD07704.1| peptidoglycan-associated lipoprotein [Shigella boydii CDC 3083-94]
gi|188487597|gb|EDU62700.1| peptidoglycan-associated lipoprotein [Escherichia coli 53638]
gi|189002834|gb|EDU71820.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4076]
gi|189354292|gb|EDU72711.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4401]
gi|189363387|gb|EDU81806.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4486]
gi|189373170|gb|EDU91586.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC869]
gi|194411203|gb|EDX27610.1| peptidoglycan-associated lipoprotein [Escherichia coli B171]
gi|194420838|gb|EDX36893.1| peptidoglycan-associated lipoprotein [Escherichia coli 101-1]
gi|208732063|gb|EDZ80751.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4045]
gi|208737680|gb|EDZ85363.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4042]
gi|209157823|gb|ACI35256.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4115]
gi|209776378|gb|ACI86501.1| peptidoglycan-associated lipoprotein [Escherichia coli]
gi|209776380|gb|ACI86502.1| peptidoglycan-associated lipoprotein [Escherichia coli]
gi|209776382|gb|ACI86503.1| peptidoglycan-associated lipoprotein [Escherichia coli]
gi|209776384|gb|ACI86504.1| peptidoglycan-associated lipoprotein [Escherichia coli]
gi|209776386|gb|ACI86505.1| peptidoglycan-associated lipoprotein [Escherichia coli]
gi|209911251|dbj|BAG76325.1| peptidoglycan-associated lipoprotein [Escherichia coli SE11]
gi|217322644|gb|EEC31068.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
TW14588]
gi|218350897|emb|CAU96595.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli 55989]
gi|218360036|emb|CAQ97583.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli IAI1]
gi|218369099|emb|CAR16853.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli IAI39]
gi|218431165|emb|CAR12041.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli UMN026]
gi|238861988|gb|ACR63986.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli BW2952]
gi|242376503|emb|CAQ31207.1| pal, subunit of The Tol-Pal Cell Envelope Complex, Colicin S4
Transport System and The Colicin A Import System
[Escherichia coli BL21(DE3)]
gi|253325332|gb|ACT29934.1| peptidoglycan-associated lipoprotein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972712|gb|ACT38383.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli B str. REL606]
gi|253976906|gb|ACT42576.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli BL21(DE3)]
gi|254591298|gb|ACT70659.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 str. TW14359]
gi|257752625|dbj|BAI24127.1| peptidoglycan-associated outer membrane lipoprotein Pal
[Escherichia coli O26:H11 str. 11368]
gi|257758094|dbj|BAI29591.1| peptidoglycan-associated outer membrane lipoprotein Pal
[Escherichia coli O103:H2 str. 12009]
gi|257763228|dbj|BAI34723.1| peptidoglycan-associated outer membrane lipoprotein Pal
[Escherichia coli O111:H- str. 11128]
gi|260450105|gb|ACX40527.1| peptidoglycan-associated lipoprotein [Escherichia coli DH1]
gi|281599943|gb|ADA72927.1| Peptidoglycan-associated lipoprotein precursor [Shigella flexneri
2002017]
gi|284920528|emb|CBG33590.1| peptidoglycan-associated lipoprotein [Escherichia coli 042]
gi|290761557|gb|ADD55518.1| Peptidoglycan-associated lipoprotein precursor [Escherichia coli
O55:H7 str. CB9615]
gi|291323828|gb|EFE63250.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli B088]
gi|291428582|gb|EFF01607.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli FVEC1412]
gi|291434084|gb|EFF07057.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli B185]
gi|291469593|gb|EFF12077.1| conserved hypothetical protein [Escherichia coli B354]
gi|298279474|gb|EFI20982.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli FVEC1302]
gi|299879411|gb|EFI87622.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 196-1]
gi|300315608|gb|EFJ65392.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 175-1]
gi|300355807|gb|EFJ71677.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 198-1]
gi|300398433|gb|EFJ81971.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 69-1]
gi|300401221|gb|EFJ84759.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 84-1]
gi|300414465|gb|EFJ97775.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 115-1]
gi|300417844|gb|EFK01155.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 182-1]
gi|300453164|gb|EFK16784.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 116-1]
gi|300457197|gb|EFK20690.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 21-1]
gi|300462562|gb|EFK26055.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 187-1]
gi|300524511|gb|EFK45580.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 119-7]
gi|300531081|gb|EFK52143.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 107-1]
gi|300839541|gb|EFK67301.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 124-1]
gi|300845577|gb|EFK73337.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 78-1]
gi|301073872|gb|EFK88678.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 146-1]
gi|306905692|gb|EFN36220.1| peptidoglycan-associated lipoprotein [Escherichia coli W]
gi|308118980|gb|EFO56242.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 145-7]
gi|309700963|emb|CBJ00260.1| peptidoglycan-associated lipoprotein [Escherichia coli ETEC H10407]
gi|310336581|gb|EFQ01748.1| peptidoglycan-associated lipoprotein [Escherichia coli 1827-70]
gi|313649616|gb|EFS14040.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2a str.
2457T]
gi|315059984|gb|ADT74311.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli W]
gi|315135398|dbj|BAJ42557.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli
DH1]
gi|315257660|gb|EFU37628.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 85-1]
gi|315614617|gb|EFU95259.1| peptidoglycan-associated lipoprotein [Escherichia coli 3431]
gi|320172956|gb|EFW48184.1| 18K peptidoglycan-associated outer membrane lipoprotein [Shigella
dysenteriae CDC 74-1112]
gi|320179418|gb|EFW54375.1| 18K peptidoglycan-associated outer membrane lipoprotein [Shigella
boydii ATCC 9905]
gi|320183982|gb|EFW58806.1| 18K peptidoglycan-associated outer membrane lipoprotein [Shigella
flexneri CDC 796-83]
gi|320193146|gb|EFW67786.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Escherichia coli O157:H7 str. EC1212]
gi|320198139|gb|EFW72743.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Escherichia coli EC4100B]
gi|320637999|gb|EFX07768.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 str. G5101]
gi|320643395|gb|EFX12575.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H- str. 493-89]
gi|320648689|gb|EFX17325.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H- str. H 2687]
gi|320654327|gb|EFX22380.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O55:H7 str. 3256-97 TW 07815]
gi|320659959|gb|EFX27501.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O55:H7 str. USDA 5905]
gi|320664785|gb|EFX31923.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 str. LSU-61]
gi|323153743|gb|EFZ39990.1| peptidoglycan-associated lipoprotein [Escherichia coli EPECa14]
gi|323158793|gb|EFZ44806.1| peptidoglycan-associated lipoprotein [Escherichia coli E128010]
gi|323163900|gb|EFZ49710.1| peptidoglycan-associated lipoprotein [Shigella sonnei 53G]
gi|323170862|gb|EFZ56512.1| peptidoglycan-associated lipoprotein [Escherichia coli LT-68]
gi|323180019|gb|EFZ65575.1| peptidoglycan-associated lipoprotein [Escherichia coli 1180]
gi|323185098|gb|EFZ70464.1| peptidoglycan-associated lipoprotein [Escherichia coli 1357]
gi|323379456|gb|ADX51724.1| peptidoglycan-associated lipoprotein [Escherichia coli KO11]
gi|323938280|gb|EGB34538.1| peptidoglycan-associated lipoprotein [Escherichia coli E1520]
gi|323942964|gb|EGB39128.1| peptidoglycan lipoprotein [Escherichia coli E482]
gi|323946993|gb|EGB43007.1| peptidoglycan-associated lipoprotein [Escherichia coli H120]
gi|323963122|gb|EGB58692.1| peptidoglycan lipoprotein [Escherichia coli H489]
gi|323967344|gb|EGB62765.1| peptidoglycan lipoprotein [Escherichia coli M863]
gi|323972028|gb|EGB67248.1| peptidoglycan lipoprotein [Escherichia coli TA007]
gi|323976278|gb|EGB71368.1| peptidoglycan lipoprotein [Escherichia coli TW10509]
gi|324020351|gb|EGB89570.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 117-3]
gi|324116283|gb|EGC10204.1| peptidoglycan lipoprotein [Escherichia coli E1167]
gi|326341510|gb|EGD65300.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Escherichia coli O157:H7 str. 1044]
gi|326345729|gb|EGD69468.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Escherichia coli O157:H7 str. 1125]
gi|327254430|gb|EGE66052.1| peptidoglycan-associated lipoprotein [Escherichia coli STEC_7v]
gi|331060523|gb|EGI32487.1| peptidoglycan-associated lipoprotein [Escherichia coli TA143]
gi|331065464|gb|EGI37357.1| peptidoglycan-associated lipoprotein [Escherichia coli TA271]
gi|332093802|gb|EGI98856.1| peptidoglycan-associated lipoprotein [Shigella boydii 5216-82]
gi|332096454|gb|EGJ01450.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae 155-74]
gi|332097640|gb|EGJ02615.1| peptidoglycan-associated lipoprotein [Shigella boydii 3594-74]
gi|332342078|gb|AEE55412.1| peptidoglycan-associated lipoprotein [Escherichia coli UMNK88]
gi|332760890|gb|EGJ91178.1| peptidoglycan-associated lipoprotein [Shigella flexneri 4343-70]
gi|332761270|gb|EGJ91556.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2747-71]
gi|332763939|gb|EGJ94177.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-671]
gi|332768160|gb|EGJ98345.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2930-71]
gi|333007348|gb|EGK26828.1| peptidoglycan-associated lipoprotein [Shigella flexneri VA-6]
gi|333007878|gb|EGK27354.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-218]
gi|333010140|gb|EGK29575.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-272]
gi|333021092|gb|EGK40349.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-227]
gi|333021585|gb|EGK40835.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-304]
Length = 173
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C ++ G + + Q
Sbjct: 6 VLKGLMIALPVM-AIAACSSNKNASNDGSE------GMLGAGTGMDANGGNGNMSSEEQA 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + I + + + F ML A L PS + ++ H D
Sbjct: 59 RLQMQQLQQNNIV------YFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 113 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVL 171
Query: 181 Q 181
Sbjct: 172 V 172
>gi|262275699|ref|ZP_06053508.1| outer membrane protein A precursor [Grimontia hollisae CIP 101886]
gi|262219507|gb|EEY70823.1| outer membrane protein A precursor [Grimontia hollisae CIP 101886]
Length = 331
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + L L + L F I HTDS+G+ N +S++RA
Sbjct: 220 NVELFAFGKAELSPNASQQLGPMLKRLQNFDEATATIIGHTDSVGSEAFNQKLSEQRAQS 279
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +Y I S +++ G PI +N TK GR N+R+EI+
Sbjct: 280 VANYFISN-GISAERLTIIGKGETSPIASNKTKEGRAKNRRVEIE 323
>gi|26248968|ref|NP_755008.1| putative outer membrane lipoprotein [Escherichia coli CFT073]
gi|91211939|ref|YP_541925.1| putative outer membrane lipoprotein [Escherichia coli UTI89]
gi|110642766|ref|YP_670496.1| putative outer membrane lipoprotein [Escherichia coli 536]
gi|117624826|ref|YP_853739.1| putative outer membrane lipoprotein [Escherichia coli APEC O1]
gi|191174577|ref|ZP_03036072.1| OmpA family protein [Escherichia coli F11]
gi|218559525|ref|YP_002392438.1| outer membrane lipoprotein [Escherichia coli S88]
gi|227888171|ref|ZP_04005976.1| OmpA family protein [Escherichia coli 83972]
gi|237706807|ref|ZP_04537288.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|300986825|ref|ZP_07177814.1| OmpA family protein [Escherichia coli MS 45-1]
gi|300990725|ref|ZP_07179310.1| OmpA family protein [Escherichia coli MS 200-1]
gi|301050475|ref|ZP_07197354.1| OmpA family protein [Escherichia coli MS 185-1]
gi|306812477|ref|ZP_07446675.1| putative outer membrane lipoprotein [Escherichia coli NC101]
gi|331658753|ref|ZP_08359695.1| YfiB [Escherichia coli TA206]
gi|26109374|gb|AAN81576.1|AE016764_258 Putative lipoprotein yfiB precursor [Escherichia coli CFT073]
gi|91073513|gb|ABE08394.1| putative lipoprotein YfiB precursor [Escherichia coli UTI89]
gi|110344358|gb|ABG70595.1| putative lipoprotein YfiB precursor [Escherichia coli 536]
gi|115513950|gb|ABJ02025.1| putative outer membrane lipoprotein [Escherichia coli APEC O1]
gi|190905150|gb|EDV64794.1| OmpA family protein [Escherichia coli F11]
gi|218366294|emb|CAR04045.2| putative outer membrane lipoprotein [Escherichia coli S88]
gi|222034307|emb|CAP77048.1| lipoprotein yfiB [Escherichia coli LF82]
gi|226899847|gb|EEH86106.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|227834811|gb|EEJ45277.1| OmpA family protein [Escherichia coli 83972]
gi|281179651|dbj|BAI55981.1| conserved hypothetical protein [Escherichia coli SE15]
gi|294492477|gb|ADE91233.1| lipoprotein, OmpA family [Escherichia coli IHE3034]
gi|300297822|gb|EFJ54207.1| OmpA family protein [Escherichia coli MS 185-1]
gi|300305693|gb|EFJ60213.1| OmpA family protein [Escherichia coli MS 200-1]
gi|300407877|gb|EFJ91415.1| OmpA family protein [Escherichia coli MS 45-1]
gi|305854515|gb|EFM54953.1| putative outer membrane lipoprotein [Escherichia coli NC101]
gi|307554618|gb|ADN47393.1| putative lipoprotein YfiB precursor [Escherichia coli ABU 83972]
gi|307625845|gb|ADN70149.1| putative outer membrane lipoprotein [Escherichia coli UM146]
gi|312947177|gb|ADR28004.1| putative outer membrane lipoprotein [Escherichia coli O83:H1 str.
NRG 857C]
gi|315284819|gb|EFU44264.1| OmpA family protein [Escherichia coli MS 110-3]
gi|315290954|gb|EFU50319.1| OmpA family protein [Escherichia coli MS 153-1]
gi|323951196|gb|EGB47072.1| OmpA family protein [Escherichia coli H252]
gi|323957028|gb|EGB52754.1| OmpA family protein [Escherichia coli H263]
gi|324005821|gb|EGB75040.1| OmpA family protein [Escherichia coli MS 57-2]
gi|324012443|gb|EGB81662.1| OmpA family protein [Escherichia coli MS 60-1]
gi|331053335|gb|EGI25364.1| YfiB [Escherichia coli TA206]
Length = 160
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLLAPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N ++S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEVLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|305665009|ref|YP_003861296.1| OmpA/MotB protein [Maribacter sp. HTCC2170]
gi|88707423|gb|EAQ99668.1| OmpA/MotB [Maribacter sp. HTCC2170]
Length = 404
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 6/141 (4%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCY-----IPVHVSFVSEVFLEKKFLPMLQLIATILN 104
E + + + + L + L + IL
Sbjct: 261 LESAEPADFVQNPTAIRNNDRNLIVLNETHLFENVLFHFDKYDLLGQAKNELDRVYRILE 320
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
S I+I HTDS+G NL +S+ RA + +Y ++ G+SSNR S G PI
Sbjct: 321 NDSSLSISIYGHTDSVGAESYNLELSKLRAKSVANYFVELGLSSNRIKST-GKGSSEPIA 379
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
+N ++ GR+ N+R+E + +
Sbjct: 380 SNASENGRKMNRRVEFVLSNK 400
>gi|170725642|ref|YP_001759668.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169810989|gb|ACA85573.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 367
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQM-QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
D N +D+ + Q+ G + + + + ++ +
Sbjct: 212 DSDNDGVTDDMDQCPNTPSTHQVDGNGCTIYKETTEQR-DVGSIQFANNSSVVKNESYQQ 270
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
++ +A +N+ P + + I H +G + N+++S +RA+ + L+++ + + +
Sbjct: 271 IEKLANYMNQHPKSTVLISGHASDVGKAEYNMMLSDKRANAVAKILVEKYGIAQDRVEAK 330
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
GF PI + + N+RIE + +KK
Sbjct: 331 GFGITQPIIEGSSPAANKANRRIEAHVT---GVKK 362
>gi|90579228|ref|ZP_01235038.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
gi|90440061|gb|EAS65242.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
Length = 326
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 41/101 (40%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ K L L + + I + HTDS G N +S +RA+ +
Sbjct: 211 FAFDSSTITKGDAAKLAPFEQRLKEQDAAKIYVVGHTDSRGAESYNQTLSVKRAEAVADA 270
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L Q + I +G P+ +N T+ GR N+R++I
Sbjct: 271 LRQHLKMDSTRIIAQGRGESEPVASNQTEEGRAQNRRVDII 311
>gi|308071044|ref|YP_003872649.1| flagellar motor protein [Paenibacillus polymyxa E681]
gi|305860323|gb|ADM72111.1| Flagellar motor protein [Paenibacillus polymyxa E681]
Length = 271
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 64/187 (34%), Gaps = 21/187 (11%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-----------DTGIVVSR 67
K+ K + E E Q + + I VS
Sbjct: 83 SKNPPTTKQPAADKKEAGSTKLTEREQAFRTQEKELQNLMGVIQEYITDNKLENQIFVSD 142
Query: 68 IGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT---- 122
I + F L++ L +A++ T I+I+ HTD+I
Sbjct: 143 QPRGIVITLNDRFLFDQGRAALKQGSANTLSKLASLFRDLK-TPISIEGHTDNIPFTRSS 201
Query: 123 ----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
K+N +S RA + + + R S G+A P+ N T+ GRQ N+R+
Sbjct: 202 NSSTYKDNWELSGARALSVLRFFLDREQLSPSGFQYAGYADTRPVGDNSTEAGRQKNRRV 261
Query: 179 EIQIFPR 185
EI + +
Sbjct: 262 EITVLRQ 268
>gi|284922551|emb|CBG35638.1| outer membrane lipoprotein [Escherichia coli 042]
Length = 160
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 63/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLIFTSLVLTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEALSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|91227007|ref|ZP_01261544.1| putative protein F-related protein [Vibrio alginolyticus 12G01]
gi|91188809|gb|EAS75095.1| putative protein F-related protein [Vibrio alginolyticus 12G01]
Length = 224
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 63/208 (30%), Gaps = 29/208 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDT-------------DIVNKRFGSSLD 48
+K L + + ++GC ++ + S
Sbjct: 17 MKHWFLIVCGI--LAGCSSLDQDMVPGGNILDTAPKSNTELRHPEWGYPSASNVASSPRS 74
Query: 49 KAEDEFQMQLQDTGIVVSR------------IGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
++ + G + + V F L +
Sbjct: 75 YQTARASVKKSQNVTSLEMFLSRHNIPHETLSGGHLMIRLKEQVHFQTGSARLSAQSQDW 134
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
++ I L + I H DS G N +S++RA ++ L+ + R S R
Sbjct: 135 IRNIGHYLAGRTDVDVVIDGHADSTGAESFNDTLSEKRAREVEKQLLATSIPRQRVFS-R 193
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
GF P +N T G+ N+R+E+ +
Sbjct: 194 GFGEYVPKCSNATASGKACNRRVELTLI 221
>gi|56698003|ref|YP_168374.1| hypothetical protein SPO3171 [Ruegeria pomeroyi DSS-3]
gi|56679740|gb|AAV96406.1| OmpA domain protein [Ruegeria pomeroyi DSS-3]
Length = 766
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 14/175 (8%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
++K ++ K + + L V GD +
Sbjct: 594 EAERKRLEEEARVLAEQAKDLERYRSEFFGRLRDVL-GNQEGVRIEGDRFVFS-SEVLFD 651
Query: 83 VSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDS-----IGTLKNNLLIS 130
L + + +A IL + VI + HTD+ G +N +S
Sbjct: 652 PGSADLSPEGQFEIAKVARILRAIAADIPPEINWVIRVDGHTDNVPLLGTGKYADNWELS 711
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
Q RA + Y+++ +S GF P++ DT R N+RIE+++ +
Sbjct: 712 QGRALSVVRYMVESLGLPPDRLSANGFGEYQPVNPADTAEARAQNRRIELKLTEK 766
>gi|320327051|gb|EFW83065.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330876989|gb|EGH11138.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 381
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ + + ++D+ + R D++ PV SF + L L +
Sbjct: 141 DPKVTQAWLDEYDPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 200
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 201 TRLAKVVEGDQKTAVLILGHADTSGPTEANQKISQERAQSVAAIFRL-SGLERNRLSQRG 259
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 260 MGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 292
>gi|313205096|ref|YP_004043753.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312444412|gb|ADQ80768.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 426
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 60/157 (38%), Gaps = 2/157 (1%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
K ++ + + SL+ + L S ++
Sbjct: 269 KDNTIETINRLNALEAKNDSLNAKIKKMNDDLDSISNSRSNEPGVLKSSFQNIEFEFGSD 328
Query: 87 FLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L L IA L K +++ +TD IGT + N ++S +RA+ + +
Sbjct: 329 KLTTNSYATLDQIALTLKDKSAKVRLSVAGYTDYIGTEEYNQILSVKRANSV-RIYLLNK 387
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+++ G+ K P+ N+T GRQ N+R+E QI
Sbjct: 388 GVPASSVTITGYGEKDPVANNNTDKGRQANRRVEFQI 424
>gi|75676006|ref|YP_318427.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
gi|74420876|gb|ABA05075.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
Length = 321
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 52/127 (40%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+M + ++ + I I + + + P L IA +L P + I
Sbjct: 191 RMVVVESSAMQRDIASQGRVAIHGILFDFDKDTMRSDSKPQLDEIAKLLKAQPELKVLIV 250
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTDS G L N +S RA I L + + ++ G P+ TN T+ GR
Sbjct: 251 GHTDSKGALDYNRDLSYRRARSIVESLSREHGVAAARLTPLGVGMAAPMATNRTEEGRAL 310
Query: 175 NQRIEIQ 181
N+R+E+
Sbjct: 311 NRRVELV 317
>gi|254516643|ref|ZP_05128702.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3]
gi|219675066|gb|EED31433.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3]
Length = 255
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 11/150 (7%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG----DMITCYIPVHVSFVSEVFLEKKF 92
D D+ + G+ V G D + I L+ K
Sbjct: 112 DSDGDGVADYKDQCAN------TPAGVKVDMKGCPVKDEVVLTIDRLGFAFDSAALDAKS 165
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L ++ S + + +TDS G + N +S+ RA YL+ + + +
Sbjct: 166 RSALDAAVAVIKSHSSVKMDVVGYTDSSGPEEYNQKLSERRAQAAVDYLVSQ-GVAAGQL 224
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ +ND++ GR+ N+R+E+ +
Sbjct: 225 RATGRGEANPVASNDSRDGRERNRRVELVV 254
>gi|116249829|ref|YP_765667.1| hypothetical protein RL0063 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254477|emb|CAK05551.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 418
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
V + L+ +L IAT L FP + I HTD+ G + N +S ERA+ IK+
Sbjct: 81 FGVGKSTLQPGAETLLDDIATALKNFPDWSLRIVGHTDASGNAETNERLSLERANAIKAA 140
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ-IFPRGNIKK 190
L++RGV+++R ++ G PI +N+T G+ N+R+E+ + KK
Sbjct: 141 LVERGVNTDRLLAA-GAGQTRPIASNETAEGKALNRRVELVRLTDSAEAKK 190
>gi|77457796|ref|YP_347301.1| flagellar motor protein MotD [Pseudomonas fluorescens Pf0-1]
gi|77381799|gb|ABA73312.1| putative chemotaxis protein [Pseudomonas fluorescens Pf0-1]
Length = 296
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 58/169 (34%), Gaps = 7/169 (4%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
K + S D F + + V + + + F S
Sbjct: 84 KDAEQVDAGIAGASDPLKSIADDISAAFGDLISSNQMTVRGNELWVEIELNSSLLFGSGD 143
Query: 87 FLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYL 141
+ ++ +A IL F I ++ TD N +S R+ I L
Sbjct: 144 AMPSDIAFNIIDKVAAILKPF-DNPIHVEGFTDDQPIRTAQYPTNWELSSARSASIVRML 202
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+GV+ R SV G+ P+ N T GR N+R+ + + ++++
Sbjct: 203 AMQGVNPGRLASV-GYGEFQPVANNATAEGRAKNRRVVLVVSRNLDVRR 250
>gi|313205304|ref|YP_004043961.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312444620|gb|ADQ80976.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 294
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 8/155 (5%)
Query: 39 VNKRFGSSLDKAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLP 94
V R S + + + L + + V + + + F +E K +
Sbjct: 129 VVARQDSITKRLNNVLRDALLGFKSDELSVEIKNGKVYVSMSDKLLFKSGSAAIESKGID 188
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNR 150
++++A +LNK I ++ HTD+I ++N +S RA I L +
Sbjct: 189 AIKVLADVLNKNAEIDILVEGHTDNIPIKTALYQDNWDLSVARAISIVRILTNEYRIAPT 248
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ G P +N T GR +N+R EI + P+
Sbjct: 249 RLTASGKGEFSPRASNATPEGRASNRRTEIILSPK 283
>gi|295095609|emb|CBK84699.1| type IV / VI secretion system protein, DotU family [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 412
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFL-EKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V D + F S + ++ P++ IA +N I
Sbjct: 263 LKPEIDAGLVAVKDEADRSVVILKGDGLFASASTVVRDRYEPVIDRIAQAMNNVSG-KIL 321
Query: 113 IQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ ++D++ +N +S ERA ++ L R + G P+ N T
Sbjct: 322 VVGYSDNVPIRSARFASNYELSLERARSVQKQLQGSLSQPER-VKAEGRGEINPVAPNTT 380
Query: 169 KVGRQNNQRIEIQIF 183
R N+R+EI +
Sbjct: 381 PENRARNRRVEITLL 395
>gi|319407719|emb|CBI81367.1| Outer membrane lipoprotein omp16 homolog [Bartonella sp. 1-1C]
Length = 168
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 63/184 (34%), Gaps = 29/184 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + ++ T+ GCG S + +
Sbjct: 12 LTIVFCLLLTLIGCGKKSIDATNSLGQSGYNNAQAGSS---------------------- 49
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
T + V F +E +L A L ++P I I+ H D GT
Sbjct: 50 -----QDFTVNVGDRVFFSLDSSSIESDAEYILARQAEWLLRYPHYSITIEGHADERGTR 104
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ NL + Q RA ++ +LI GVSS R ++ + + P+ D N+R + +
Sbjct: 105 EYNLALGQRRAVAVRDHLISLGVSSQRMNTIS-YGKERPVAVCDNISCWNQNRRAVLVVN 163
Query: 184 PRGN 187
G+
Sbjct: 164 NTGS 167
>gi|315637845|ref|ZP_07893035.1| fibronectin-binding protein [Campylobacter upsaliensis JV21]
gi|315482086|gb|EFU72700.1| fibronectin-binding protein [Campylobacter upsaliensis JV21]
Length = 327
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 2/143 (1%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
S G ++ G T + H F + + F +
Sbjct: 180 GSAKDGAVSRTSSKVKAICPVQPREGALLDENGCEKTISLEGHFEF-DKTTINPAFESRI 238
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
Q IA +L + ++ HTD+ G+ N +S+ RA + + + + I V+G
Sbjct: 239 QNIAKVLEENEKYNTILEGHTDNTGSRAYNQKLSERRAQRVANE-LMKFGIEKSRIEVKG 297
Query: 157 FAYKYPIDTNDTKVGRQNNQRIE 179
+ P +N+TK GR +N+R+E
Sbjct: 298 YGQDKPRSSNETKEGRADNRRVE 320
>gi|300310091|ref|YP_003774183.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Herbaspirillum seropedicae SmR1]
gi|300072876|gb|ADJ62275.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Herbaspirillum seropedicae SmR1]
Length = 271
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 6/162 (3%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHV 80
+ V + + ++ S + A + G+ VS + V
Sbjct: 111 DGTTVSITGEVANEAQRQQIASDM--ASSLNSSYTVNNGLRVSTSEQGLLDNALANRVVS 168
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L + +L IA + K + I +TD+ G +N+ +S RAD +
Sbjct: 169 FESGQATLTPEGKRILDEIAATMLKLKGRHVEIIGNTDNEGLRASNISLSLARADAV-KA 227
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +S G P+ +N T GR N+RIE +I
Sbjct: 228 YLGAKGVDESLLSTSGQGPDRPVASNATAEGRAKNRRIEFRI 269
>gi|116623978|ref|YP_826134.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116227140|gb|ABJ85849.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 388
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ L+ L IAT+LN P + I +TD++G+ ++NL +S+ R
Sbjct: 279 FTMDQIAFDSGSATLKPASQTQLNNIATVLNNCPGVRLDIAGYTDNVGSAESNLRLSRNR 338
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
A+ + + L++ GV R + G+ + P+ N + GR N+R+ +++ P
Sbjct: 339 ANSVVAVLVKEGVPRER-FNAEGYGEEDPVADNSIEQGRAQNRRVAMRVAP 388
>gi|262278657|ref|ZP_06056442.1| outer membrane protein [Acinetobacter calcoaceticus RUH2202]
gi|262259008|gb|EEY77741.1| outer membrane protein [Acinetobacter calcoaceticus RUH2202]
Length = 255
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 3/131 (2%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ QL I D + I L +L +A LNK +
Sbjct: 128 QLYSQLSVNQAEQKIIDDALKNRIIE--FESGSAVLTDAGQKILDEMAVALNKVGGKKVK 185
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTDS G NL +SQ+RA +K+YLI + +S G P+ N + GR
Sbjct: 186 IVGHTDSSGDATKNLKLSQDRALAVKNYLISKS-IPADHLSAEGLGSSKPVADNTSPEGR 244
Query: 173 QNNQRIEIQIF 183
+ N+RIE +
Sbjct: 245 KKNRRIEFTVL 255
>gi|255036344|ref|YP_003086965.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254949100|gb|ACT93800.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 502
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 55/134 (41%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
++ I + D + + L + +LN + I +
Sbjct: 360 DKIIRDAIKNNLPKDECEALFSNIEFDTDKAIIRNASKETLSKVVELLNMRTNCRIVLVG 419
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD+ + N+ +S+ R D K +L++ G++ I + PI N T G Q+N
Sbjct: 420 HTDARASDAYNVSLSRRRVDAAKRFLVRAGLTDPSRIIAEYYGEYRPIAENTTVEGLQSN 479
Query: 176 QRIEIQIFPRGNIK 189
+R+EI+I P I+
Sbjct: 480 RRVEIKILPNNTIR 493
>gi|193076988|gb|ABO11733.2| putative outer membrane lipoprotein [Acinetobacter baumannii ATCC
17978]
Length = 255
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 3/131 (2%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ QL I D + I L + +L +A LNK +
Sbjct: 128 QLFSQLSVNQAEQKIIDDALKNRIIE--FESGSAVLTEAGQKILDEMAVALNKVGGKKVK 185
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTDS G NL +SQ+RA +K+YLI + +S G P+ N + GR
Sbjct: 186 IVGHTDSSGDANKNLKLSQDRALAVKNYLISK-NIPADHLSTEGLGSSKPVADNTSAEGR 244
Query: 173 QNNQRIEIQIF 183
+ N+RIE +
Sbjct: 245 KKNRRIEFTVL 255
>gi|119477093|ref|ZP_01617329.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [marine gamma proteobacterium HTCC2143]
gi|119449456|gb|EAW30694.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [marine gamma proteobacterium HTCC2143]
Length = 363
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 65/173 (37%), Gaps = 5/173 (2%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + D+D + + V + + ++ +
Sbjct: 196 CPTTPAGAAVDARGCALDSDNDGVADYQDACLDTPAGRQVDERGCKYVLKRTEEVSLNVN 255
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+E + + +A + KF I+ HTD G+ N +SQ+RA+ +
Sbjct: 256 ---FASDSSAVEGNYTSEISNVAEFMKKFAGATSVIEGHTDDTGSAIYNETLSQKRANAV 312
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ L+ R S +S +G+ PI ND+ GR+ N+R+ I + I++
Sbjct: 313 MNVLVNRFGISAERLSAKGYGEARPIQDNDSVEGRRANRRVVAVI--KAEIEE 363
>gi|153952154|ref|YP_001397367.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. doylei 269.97]
gi|152939600|gb|ABS44341.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. doylei 269.97]
Length = 165
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 67/184 (36%), Gaps = 23/184 (12%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L S+ + ISGC S SN + G +D +
Sbjct: 1 MKKILFTSIATLAVVISGCSTKSTSVSGDSSVDSNRG--LGGSDGWDIDSKISQLND--- 55
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTD 118
+ + + ++ A I N + I ++ + D
Sbjct: 56 ---------------TLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCD 100
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N + +RA +K LI +GV+++R I+V+ + P+ T TK N+R
Sbjct: 101 EWGTDEYNQALGLKRAKAVKEALIAKGVNADR-IAVKSYGETNPVCTEKTKACDAQNRRA 159
Query: 179 EIQI 182
E ++
Sbjct: 160 EFKL 163
>gi|325121713|gb|ADY81236.1| OmpA/MotB domain protein [Acinetobacter calcoaceticus PHEA-2]
Length = 255
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 3/131 (2%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ QL I D + I L +L +A LNK +
Sbjct: 128 QLYSQLSVNQAEQKIIDDALKNRIIE--FESGSAVLTDAGQKILDEMAIALNKVGGKKVK 185
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTDS G NL +SQ+RA +K+YLI + +S G P+ N + GR
Sbjct: 186 IVGHTDSSGDATKNLKLSQDRALAVKNYLISKS-IPADHLSTEGLGSSKPVADNTSPEGR 244
Query: 173 QNNQRIEIQIF 183
+ N+RIE +
Sbjct: 245 KKNRRIEFTVL 255
>gi|260432828|ref|ZP_05786799.1| OmpA/MotB domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260416656|gb|EEX09915.1| OmpA/MotB domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 580
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 58/161 (36%), Gaps = 14/161 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + L V GD + L + +
Sbjct: 422 AKQAEDLQRYRSEFFGRLRDVL-GDQEGVRIEGDRFVFS-SEVLFDPGSAVLSDEGKREI 479
Query: 97 QLIATILNKFP-------STVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQR 144
+A IL + VI + HTD+I G ++N +SQ RA + Y+++
Sbjct: 480 AKVAEILRSVAAEIPPELNWVIRVDGHTDNIPVSGAGRYRDNWELSQGRALSVVRYMVEE 539
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ GF P+DT DT R N+RIE+++ R
Sbjct: 540 LGIPPNRLAANGFGEFQPVDTADTPEARAKNRRIELKLTER 580
>gi|254787356|ref|YP_003074785.1| thrombospondin type 3 repeat family protein [Teredinibacter turnerae
T7901]
gi|237685616|gb|ACR12880.1| thrombospondin type 3 repeat family protein [Teredinibacter turnerae
T7901]
Length = 3177
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTDS 119
G+ V+ G + L + L +A + + I H D
Sbjct: 3055 EGVAVNHFGCP-EISPVTVHFAFNSAVLSAETQAQLDALAQGVAAANYDFRVKIAGHADW 3113
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+G+ N +S++RA+ + +YL +R + RG+ P+ N++ GR N+R+E
Sbjct: 3114 VGSEAFNQGLSEKRANAVANYLSERLQLNAEKWDTRGYGEVKPVADNNSAQGRAQNRRVE 3173
Query: 180 IQ 181
I
Sbjct: 3174 IT 3175
>gi|208435023|ref|YP_002266689.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
G27]
gi|208432952|gb|ACI27823.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
G27]
Length = 179
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 61/184 (33%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + + +GC K + + +K E + +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCTQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLM 178
>gi|167035280|ref|YP_001670511.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166861768|gb|ABZ00176.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 325
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLE 89
I K + LD+ E + + ++D+ + + R +++ +PV S+ + L
Sbjct: 81 GPVVPKIDQKATQAWLDEYEPKLREAIKDSKLELERRDNVLAVTLPVDSSYNPDRPNMLL 140
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L + +A + P T + + H DS G N +S ERA + + G+ +
Sbjct: 141 PMTLGPITRVAKTVEGDPKTAVLVLGHADSSGAAAANQKLSLERAASVSAIFRLSGLQRD 200
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
R ++++G P ND+ GR N+R+E+ + P+ +
Sbjct: 201 R-LTLKGMGSVMPRAANDSAEGRSLNRRVEMLLTPQNTM 238
>gi|332666790|ref|YP_004449578.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332335604|gb|AEE52705.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 495
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 6/139 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
S ++ ++EF L + L L + +
Sbjct: 361 SEIETRKEEFIEALDTALTTAKKT-----VQFSYVTFATGSEKLTGVSRYELDNLVEAMK 415
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I + HTD IG NL +SQ+RAD + YL+ +GV ++R +S +GF P+
Sbjct: 416 EKKGLKIQLAGHTDDIGEDAQNLALSQKRADAVMKYLVSKGVDASR-LSAKGFGESQPVA 474
Query: 165 TNDTKVGRQNNQRIEIQIF 183
ND+ R N+R E ++
Sbjct: 475 ANDSDDNRAQNRRTEFRVV 493
>gi|303240559|ref|ZP_07327075.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
gi|302591961|gb|EFL61693.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
Length = 556
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT-CYIPVHVSFVS 84
K + V+ S +AE++ + Q + + + + IP
Sbjct: 394 KNSEGIEELLVGAVDSEISGSASQAEEKKKEFKQQDAQSIEKNTERVAKVDIPPVYYDSG 453
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ ++ + + +L + +L++FP + I +HTD++G +NNL +S++RAD +K YL+Q+
Sbjct: 454 KATVKAESIAVLNQVKEMLSQFPEYYLIIDAHTDTVGNNENNLKLSKDRADEVKKYLVQK 513
Query: 145 GVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQIF 183
GV R I RG+ PI T+ + N+R E +
Sbjct: 514 GVDEKRII-ARGWGEDRPIVPKESTEGDKAKNRRTEFILT 552
>gi|262404181|ref|ZP_06080736.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp.
RC586]
gi|262349213|gb|EEY98351.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp.
RC586]
Length = 172
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 65/181 (35%), Gaps = 15/181 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ + ++ C + + V+ ++L+ + +L++
Sbjct: 6 VLKGLMIALPV-LAVTACSSS---NDAANSGSETNQSAVSTVDSNALNAQGQLTEQELKE 61
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A L K PS + I+ H D
Sbjct: 62 QALRENQT----------IYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTIEGHADER 111
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + ++ +S+ + + P+ + N+R +
Sbjct: 112 GTPEYNIALGERRAQAVAK-YLEALGVQADQVSIVSYGEEKPLVLGQSDEAYAKNRRAVL 170
Query: 181 Q 181
Sbjct: 171 V 171
>gi|212712432|ref|ZP_03320560.1| hypothetical protein PROVALCAL_03526 [Providencia alcalifaciens DSM
30120]
gi|212684889|gb|EEB44417.1| hypothetical protein PROVALCAL_03526 [Providencia alcalifaciens DSM
30120]
Length = 165
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 22/180 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ IM ++ C + N T G S ++ + QLQ
Sbjct: 6 VLKGLMIALPIM-AVAACSSNKNNDQTGDDSSMNQT-----NTGLSAEELARQQMEQLQQ 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + ++ ML A L PS + ++ H D
Sbjct: 60 N---------------NTVYFGFDKYNVSPEYAEMLDAHAAFLRSNPSVRVVVEGHADER 104
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S +S+ + + P T+ N+R I
Sbjct: 105 GTPEYNIALGERRANAV-KMYLQSKGVSGDQVSLVSYGKEKPAVLGHTEADYAKNRRAVI 163
>gi|301026373|ref|ZP_07189819.1| OmpA family protein [Escherichia coli MS 69-1]
gi|300395559|gb|EFJ79097.1| OmpA family protein [Escherichia coli MS 69-1]
Length = 160
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L + +F ++GC K E +Q
Sbjct: 1 MIKHLVVPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEALSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|288925232|ref|ZP_06419167.1| OmpA family protein [Prevotella buccae D17]
gi|288337997|gb|EFC76348.1| OmpA family protein [Prevotella buccae D17]
Length = 284
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + ++ + ++ + + + L IA I+ + + I+ +TD++
Sbjct: 137 VDVQVLKGVVYISLADNMLYKSGSYEINDRAEETLSKIAKIIMDYKDYEVLIEGNTDNVP 196
Query: 122 TL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+NN +S RA + YL R + ++ G P+ TN T++G+
Sbjct: 197 VNTDSPKMKNIRNNWDLSALRASSVVQYLQNRYGVDPKRLTAGGRGEYNPVATNSTELGK 256
Query: 173 QNNQRIEIQIFPR 185
Q N+R +I I P+
Sbjct: 257 QRNRRTQIIITPK 269
>gi|260574902|ref|ZP_05842904.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259022907|gb|EEW26201.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 328
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 64/175 (36%), Gaps = 9/175 (5%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
+ +S + + + + ++ +T + +R+
Sbjct: 161 LVALMVSRSATSGFVQMTRVAPAAAMPVVAADPVPAA---------EAPAETVDLGNRLE 211
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + V L + LQ +A L P IA+ HTD+ G L N+ +
Sbjct: 212 TGGSLALDDLVFSSGTAALAEGSYASLQALADYLKAHPDRAIAVVGHTDASGPLAVNIAL 271
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S++RA ++ LI + G + P +N T+ GR N+R+E+ +
Sbjct: 272 SRKRAASVRQVLIDSLGVPATQVIAEGVGFLVPRASNLTEAGRAQNRRVEVMLTS 326
>gi|308273523|emb|CBX30125.1| hypothetical protein N47_D29340 [uncultured Desulfobacterium sp.]
Length = 212
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 63/165 (38%), Gaps = 5/165 (3%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
K+ + G L+KA D + + G + + + + L+
Sbjct: 29 TDKAASSAHPEVDKGKILEKALGGINENANDDIGIKTGAGREVLTMGEKALFYTNRHLLK 88
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRG 145
+ +L+ + +N+ + + I HTD +N IS A ++ Y I+
Sbjct: 89 PESFALLKKVGNFINQ-GNYKVLIVGHTDNRDAQEKGYNSNWEISSLMAVQLQKYFIEEC 147
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
I+ G+ + P +NDT RQ N+RIEI +KK
Sbjct: 148 KIKPDRITAYGYGSQQPAASNDTPESRQKNRRIEIIFNSDSPVKK 192
>gi|281421937|ref|ZP_06252936.1| OmpA family protein [Prevotella copri DSM 18205]
gi|281403991|gb|EFB34671.1| OmpA family protein [Prevotella copri DSM 18205]
Length = 284
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + ++ + ++ + + + L IA I+ + + ++ +TD++
Sbjct: 137 VDVQVLKGVVYISLADNMLYQSGSYEVNSRAQETLSKIAKIITDYKDYDVLVEGNTDNVP 196
Query: 122 TL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+NN +S RA + YL + + ++ G P+ TNDT+VG+
Sbjct: 197 VSTTSAKMKNIRNNWDLSALRAASVVQYLQDHFGVNPKRLTAGGRGEYNPVTTNDTEVGK 256
Query: 173 QNNQRIEIQIFPR 185
Q N+R +I I P+
Sbjct: 257 QRNRRTQIIITPK 269
>gi|237753154|ref|ZP_04583634.1| OmpA/MotB domain-containing protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229375421|gb|EEO25512.1| OmpA/MotB domain-containing protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 466
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 68/219 (31%), Gaps = 41/219 (18%)
Query: 2 IKELGLSMFIMTTISGCGLASRE------KKKVFLHKSNDTDIVNKRFG----------- 44
+K+ +S+ + +SGC + + L + I+ K+
Sbjct: 3 LKKGCVSVALAIVLSGCAINQQNIGKVSGTAGGVLVGAGTGAIIGKQVSGNSGALVGAGI 62
Query: 45 -------------SSLDKAEDEFQMQLQDTGIVVS---------RIGDMITCYIPVHVSF 82
+DK E + + + + + + +
Sbjct: 63 GAIAGGIAGFFIGDYIDKRRAEQRKISEAKNVKIEFENIKKDGTKQKNDKVIIKDNNQFK 122
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ L IA + I I HTD G N +S++RA +
Sbjct: 123 SASSTLNPNAKDYYTQIAKT-YQVKDKKILIVGHTDDTGNSAFNQKLSEKRARAVGKVFA 181
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ S + I +G P N+T+ GR N+R+EI
Sbjct: 182 -QNGVSTKNIYYQGAGSTQPKADNNTEKGRAENRRVEII 219
>gi|145298724|ref|YP_001141565.1| flagellar motor protein MotB [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851496|gb|ABO89817.1| Flagellar motor component MotB [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 292
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 6/145 (4%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIAT 101
+ + + Q++ + V ++G + I F FL+ +F+P++ IA
Sbjct: 134 VQVTKQTLNQQLKAQIESKDLEVEQLGSQLVIRIGEKALFPADSAFLQPQFIPLVHKIAG 193
Query: 102 ILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IL P + + HTD+ ++N +S RA I ++ + +G
Sbjct: 194 ILANIPG-KVVVTGHTDNSQAPLELYRSNWELSVLRAASIVHIMLTDPKLDATRVIAQGV 252
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
A P NDT RQ N+R+EI +
Sbjct: 253 ADAQPRYPNDTAEHRQANRRVEITL 277
>gi|254248380|ref|ZP_04941700.1| Outer membrane protein [Burkholderia cenocepacia PC184]
gi|124874881|gb|EAY64871.1| Outer membrane protein [Burkholderia cenocepacia PC184]
Length = 187
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 59/182 (32%), Gaps = 22/182 (12%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K +++ ++GC A++ + ++ V L+
Sbjct: 25 MSKMNRIAVLATFVLLAGCHHAAKTPENAAAAPEPSSETVATVTADDLNNPNSPLAK--- 81
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ ++ +F +LQ A L P+ + IQ +TD
Sbjct: 82 -----------------RSIYFDFDQYSVKPEFQSLLQAHADYLRSHPARRVLIQGNTDE 124
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + Q R+ + S ++ + + P+ + N+R +
Sbjct: 125 RGTSEYNLALGQRRSQAVAS-TLETLGVPATQLEAVSLGKEKPVALGHDEEAWTQNRRAD 183
Query: 180 IQ 181
+
Sbjct: 184 LV 185
>gi|82776019|ref|YP_402366.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
dysenteriae Sd197]
gi|309786420|ref|ZP_07681046.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae 1617]
gi|81240167|gb|ABB60877.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae Sd197]
gi|308925814|gb|EFP71295.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae 1617]
Length = 173
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C ++ G + Q
Sbjct: 6 VLKGLMIALPVM-AIAACSSNKNASNDGSE------GMLGAGTGMDASGGNGNMSSEEQA 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + I + + + F ML A L PS + ++ H D
Sbjct: 59 RLQMQQLQQNNIV------YFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 113 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVL 171
Query: 181 Q 181
Sbjct: 172 V 172
>gi|30248243|ref|NP_840313.1| outer membrane protein [Nitrosomonas europaea ATCC 19718]
gi|30180128|emb|CAD84130.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718]
Length = 171
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/180 (12%), Positives = 62/180 (34%), Gaps = 14/180 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++++ ++ ++ +S C + ++ S + R G+ D +
Sbjct: 1 MRKIF-AVLVICLLSACASDNAQQTSDVEDHSYSREGEGTRGGAGSDGFGMNPLQDPSN- 58
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
++ ++ ++ A L + + +Q +TD G
Sbjct: 59 -----------ILSRRSVYFDFDSYTVKSEYRDLVLAHAAYLRDNTNAQVLLQGNTDERG 107
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + NL + Q RA+ +K L+ + ++ + + P + N+R +I
Sbjct: 108 SREYNLALGQRRANSVKDILLL-SGARDQQVEAVSLGEEKPRALGSDESSWAENRRTDIL 166
>gi|221201698|ref|ZP_03574736.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
gi|221207227|ref|ZP_03580237.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221172815|gb|EEE05252.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221178514|gb|EEE10923.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
Length = 310
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 10/161 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLD---KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ K +H + ++L+ + ++ + G++ + +
Sbjct: 155 EMKGEVHNEAQRQQIASDMANTLNPTYTIRNGLRVSASEQGLLDQTLANRTIE------F 208
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL
Sbjct: 209 ETGSATLTPQGKQILDQMAAALAKLQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYL 268
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I + S + ++ G PI NDT GR N+RIE ++
Sbjct: 269 ITK-GISPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRV 308
>gi|148977417|ref|ZP_01814017.1| peptidoglycan-associated lipoprotein [Vibrionales bacterium SWAT-3]
gi|145963369|gb|EDK28634.1| peptidoglycan-associated lipoprotein [Vibrionales bacterium SWAT-3]
Length = 180
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 60/181 (33%), Gaps = 7/181 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M ++ C ++ T+ GS + +
Sbjct: 6 VLKGLMIALPVM-AVTACSSTDE-----ATSATSGTESNQTTSGSEGNVDTTVVTPIDAN 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + + ML A L K + I+ H D
Sbjct: 60 GQLSEQELKEQALRETQTIYFAFDNSTIAGDYEEMLAAHAAYLVKNVDMKVTIEGHADER 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + YL IS+ + + P+ ++ N+R +
Sbjct: 120 GTPEYNIALGERRAQAVAKYLQAL-GVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAVL 178
Query: 181 Q 181
Sbjct: 179 V 179
>gi|74318813|ref|YP_316553.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
gi|74058308|gb|AAZ98748.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
Length = 266
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + L + L L + + + HTDS G+ N+ +S+ R
Sbjct: 156 IVLEDVNFAYDKATLRPEAREKLDQAVETLKGWGEGTVEVGGHTDSKGSEAYNMELSRRR 215
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
A+ ++ YLI +G+ + + ++ + + PI N +GR N+R+E++
Sbjct: 216 AEAVREYLIGKGIPAEQLVT-KAYGESQPIADNGNDIGRFKNRRVELK 262
>gi|68164502|gb|AAY87231.1| predicted flagellar motor protein [uncultured bacterium BAC17H8]
Length = 385
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 7/150 (4%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQ 97
N++ + D + + ++ + V R D + + +F L + +++
Sbjct: 235 SNEKAEIAEDDLKVALRQEIGQGLVAVDRQEDKVIITVGAGGAFPSGSAELTEAARKIME 294
Query: 98 LIATILNKFPSTVIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
IA +N+ S I + HTD + ++N ++ RA + L G +
Sbjct: 295 EIAG-VNEAGSGEITVSGHTDDVPLIFGSQFRDNWDLAAARAASVVQALEDTGKVPAGRM 353
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
F P+++NDT GR N+RIEI+I
Sbjct: 354 QAVSFGESQPVESNDTARGRATNRRIEIEI 383
>gi|315607338|ref|ZP_07882338.1| OmpA family protein [Prevotella buccae ATCC 33574]
gi|315251041|gb|EFU31030.1| OmpA family protein [Prevotella buccae ATCC 33574]
Length = 284
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + ++ + ++ + + + L IA I+ + + I+ +TD++
Sbjct: 137 VDVQVLKGVVYISLADNMLYKSGSYEINDRAEETLSKIAKIIMDYKDYEVLIEGNTDNVP 196
Query: 122 TL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+NN +S RA + YL R + ++ G P+ TN T++G+
Sbjct: 197 VNTDSPKMKNIRNNWDLSALRASSVVQYLQNRYGVDPKRLTAGGRGEYNPVATNSTELGK 256
Query: 173 QNNQRIEIQIFPR 185
Q N+R +I I P+
Sbjct: 257 QRNRRTQIIITPK 269
>gi|303236640|ref|ZP_07323221.1| OmpA family protein [Prevotella disiens FB035-09AN]
gi|302483144|gb|EFL46158.1| OmpA family protein [Prevotella disiens FB035-09AN]
Length = 286
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 57/133 (42%), Gaps = 10/133 (7%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + ++ + ++ + + + L IA I+ + + I+ +TD++
Sbjct: 136 VDVQVLKGVVYISLADNMLYKSGSYEISDRAEETLSKIAKIITDYSDYDVLIEGNTDNVP 195
Query: 122 TLKN---------NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
N +S RA + YL R + ++ G P+ TNDT++G+
Sbjct: 196 VNAQSERMKNIRNNWDLSCLRASSVVQYLQTRFGVDPKRLTAGGRGEYNPLATNDTELGK 255
Query: 173 QNNQRIEIQIFPR 185
Q N+R +I I P+
Sbjct: 256 QRNRRTQIIITPK 268
>gi|299770678|ref|YP_003732704.1| OmpA/MotB domain protein [Acinetobacter sp. DR1]
gi|298700766|gb|ADI91331.1| OmpA/MotB domain protein [Acinetobacter sp. DR1]
Length = 255
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 3/131 (2%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ QL I D + I L +L +A LNK +
Sbjct: 128 QLYSQLSVNQAEQKIIDDALKNRIIE--FESGSAVLTDAGQKILDEMAVALNKVGGKKVK 185
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTDS G NL +SQ+RA +K+YLI + +S G P+ N + GR
Sbjct: 186 IVGHTDSSGDATKNLKLSQDRALAVKNYLISKS-IPADHLSAEGLGSSKPVADNTSPEGR 244
Query: 173 QNNQRIEIQIF 183
+ N+RIE +
Sbjct: 245 KKNRRIEFTVL 255
>gi|260555512|ref|ZP_05827733.1| outer membrane protein [Acinetobacter baumannii ATCC 19606]
gi|260412054|gb|EEX05351.1| outer membrane protein [Acinetobacter baumannii ATCC 19606]
Length = 255
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 3/131 (2%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ QL I D + I L + +L +A LNK +
Sbjct: 128 QLFSQLSVNQAEQKIIDDALKNRIIE--FESGSAVLTEAGQKILDEMAVALNKVGGKKVK 185
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTDS G NL +SQ+RA +K+YLI + +S G P+ N + GR
Sbjct: 186 IVGHTDSSGDATKNLKLSQDRALAVKNYLISK-NIPADHLSTEGLGSSKPVADNTSAEGR 244
Query: 173 QNNQRIEIQIF 183
+ N+RIE +
Sbjct: 245 KKNRRIEFTVL 255
>gi|89900364|ref|YP_522835.1| OmpA/MotB [Rhodoferax ferrireducens T118]
gi|89345101|gb|ABD69304.1| OmpA/MotB [Rhodoferax ferrireducens T118]
Length = 212
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + L + + VI HTDS+G+ N +S R++ +
Sbjct: 104 DAFFDFDKSVLKPEGKAKLDDLVGKVKDINLEVIIAVGHTDSVGSNAYNQKLSVRRSEAV 163
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + + G P+ N TK GR N+R+EI++
Sbjct: 164 KAYLVSK-GIEKNRVYTEGKGELQPVADNKTKEGRAKNRRVEIEVV 208
>gi|269966185|ref|ZP_06180275.1| putative protein F-related protein [Vibrio alginolyticus 40B]
gi|269829332|gb|EEZ83576.1| putative protein F-related protein [Vibrio alginolyticus 40B]
Length = 224
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 64/208 (30%), Gaps = 29/208 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDT-------------DIVNKRFGSSLD 48
+K L + + ++GC ++ + S
Sbjct: 17 MKHWFLIVCGI--LAGCSSLDQDMVPGGNILDTAPKSNTELRHPEWGYPSASNVASSPRS 74
Query: 49 KAEDEFQMQLQDTGIVVSR------------IGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
++ + G + + HV F L +
Sbjct: 75 YQTARASVKKSQNVTSLEMFLSRHNIPHETLSGGHLMIRLKEHVHFQTGSARLSAQSQDW 134
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
++ I L + I H DS G N +S++RA ++ L+ + R S R
Sbjct: 135 IRNIGHYLAGRTDVDVVIDGHADSTGAESFNDTLSEKRAREVEKQLLATSIPRQRVFS-R 193
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
GF P +N T G+ N+R+E+ +
Sbjct: 194 GFGEYVPKCSNATASGKACNRRVELTLI 221
>gi|154247748|ref|YP_001418706.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus
Py2]
gi|154161833|gb|ABS69049.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2]
Length = 729
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 10/180 (5%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-------EDEFQMQLQDTGIVVSRI 68
+G G S ++ L + T + L +A E +
Sbjct: 550 TGTGEISIVDGQLRLTGTALTSAAASEMDAELKRAVRPPFMVETAIDAAVAPPPADTPTC 609
Query: 69 GDMI--TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
G + +++ ++ +A L + P+ ++ I HTD +G + N
Sbjct: 610 GRQVGELLARGTIRFASGSAEIDRHSRGLIDRLAVALKRCPTAMVRILGHTDGVGDAEFN 669
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S+ RA+ + +YL+ + +S GF P+ NDT+ G+ N+RIE ++ R
Sbjct: 670 KRLSEARANAVLAYLVTA-GVTADRLSAAGFGAGQPLAPNDTEAGKALNRRIEFEVKERA 728
>gi|57237120|ref|YP_178132.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
RM1221]
gi|86149517|ref|ZP_01067747.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni CF93-6]
gi|86151400|ref|ZP_01069615.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni 260.94]
gi|86153754|ref|ZP_01071957.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni HB93-13]
gi|88597159|ref|ZP_01100394.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni 84-25]
gi|121612869|ref|YP_999837.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni 81-176]
gi|157414426|ref|YP_001481682.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni 81116]
gi|167004808|ref|ZP_02270566.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni 81-176]
gi|205356488|ref|ZP_03223252.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni CG8421]
gi|218561794|ref|YP_002343573.1| peptidoglycan associated lipoprotein [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|283955557|ref|ZP_06373052.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni 1336]
gi|315123715|ref|YP_004065719.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|1063274|emb|CAA58288.1| precursor of peptidoglycane associated lipoprotein [Campylobacter
jejuni]
gi|57165924|gb|AAW34703.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
RM1221]
gi|85839785|gb|EAQ57044.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni CF93-6]
gi|85841747|gb|EAQ58994.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni 260.94]
gi|85842715|gb|EAQ59927.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni HB93-13]
gi|87250340|gb|EAQ73298.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni 81-176]
gi|88190220|gb|EAQ94194.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni 84-25]
gi|112359500|emb|CAL34284.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|157385390|gb|ABV51705.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni 81116]
gi|205345675|gb|EDZ32314.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni CG8421]
gi|283793018|gb|EFC31792.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni 1336]
gi|307747070|gb|ADN90340.1| Peptidoglycan associated lipoprotein (Omp18) [Campylobacter jejuni
subsp. jejuni M1]
gi|315017437|gb|ADT65530.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|315057553|gb|ADT71882.1| Outer membrane lipoprotein omp16 precursor [Campylobacter jejuni
subsp. jejuni S3]
gi|315926949|gb|EFV06311.1| peptidoglycan-associated lipoprotein [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315929959|gb|EFV09113.1| peptidoglycan-associated lipoprotein [Campylobacter jejuni subsp.
jejuni 305]
gi|315931507|gb|EFV10474.1| peptidoglycan-associated lipoprotein [Campylobacter jejuni subsp.
jejuni 327]
Length = 165
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 66/184 (35%), Gaps = 23/184 (12%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L S+ + ISGC S SN G +D +
Sbjct: 1 MKKILFTSIAALAVVISGCSTKSTSVSGDSSVDSNRG--SGGSDGWDIDSKISQLND--- 55
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTD 118
+ + + ++ A I N + I ++ + D
Sbjct: 56 ---------------TLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCD 100
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N + +RA +K LI +GV+++R I+V+ + P+ T TK N+R
Sbjct: 101 EWGTDEYNQALGLKRAKAVKEALIAKGVNADR-IAVKSYGETNPVCTEKTKACDAQNRRA 159
Query: 179 EIQI 182
E ++
Sbjct: 160 EFKL 163
>gi|261416894|ref|YP_003250577.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373350|gb|ACX76095.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326780|gb|ADL25981.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 774
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 62/175 (35%), Gaps = 8/175 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC L + K + + T+ + + + + G +
Sbjct: 593 GCPLPDPDLDKDGVCDAWVTE---RNMFNLFEGVCAGLDRCPNEAGDDGFGCPKKKVEKL 649
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNK---FPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ +L+ IA L + + I IQ HTD+ G K NL +S R
Sbjct: 650 EGISFKSGSATVNANAKRILKGIAQKLKEDEAYKDLKIVIQGHTDNRGKAKKNLKLSDRR 709
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFPRGN 187
A + + + + I G P+D N T GR+ N+RIE+ + P +
Sbjct: 710 AKAVMKQ-LTKFGVAKNRIKAVGLGSTCPVDDNSTADGREMNRRIEMHFVTPEND 763
>gi|126641351|ref|YP_001084335.1| putative outer membrane lipoprotein [Acinetobacter baumannii ATCC
17978]
Length = 209
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 3/131 (2%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ QL I D + I L + +L +A LNK +
Sbjct: 82 QLFSQLSVNQAEQKIIDDALKNRIIE--FESGSAVLTEAGQKILDEMAVALNKVGGKKVK 139
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTDS G NL +SQ+RA +K+YLI + +S G P+ N + GR
Sbjct: 140 IVGHTDSSGDANKNLKLSQDRALAVKNYLISK-NIPADHLSTEGLGSSKPVADNTSAEGR 198
Query: 173 QNNQRIEIQIF 183
+ N+RIE +
Sbjct: 199 KKNRRIEFTVL 209
>gi|325860437|ref|ZP_08173549.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
gi|325482095|gb|EGC85116.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
Length = 286
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 66/141 (46%), Gaps = 12/141 (8%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +L++ + V + ++ + ++ + + ++ L IA I+ + + I
Sbjct: 130 REELKE--VDVQVLKGVVYISLADNMLYKSGSYEVNERAEQTLSKIAKIITDYKDYDVLI 187
Query: 114 QSHTDSIGTL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ +TD++ +NN +S RA + YL R + + ++ G PI
Sbjct: 188 EGNTDNVPINTANDKMKNIRNNWDLSCLRAASVVQYLQDRFGVNPKRLTAGGRGEYNPIA 247
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
TNDT++G+Q N+R +I I P+
Sbjct: 248 TNDTELGKQRNRRTQIIITPK 268
>gi|226944750|ref|YP_002799823.1| hypothetical protein Avin_26720 [Azotobacter vinelandii DJ]
gi|226719677|gb|ACO78848.1| OmpA/MotB domain protein [Azotobacter vinelandii DJ]
Length = 430
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 61/151 (40%), Gaps = 7/151 (4%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPML 96
V + + + +++D + VS D + F S + ++F P+L
Sbjct: 273 AVAPTPAAPEPRLAKLLEAEIRDGLVRVSDEVDRSLVVLRGDGLFDSGAAQVIERFQPLL 332
Query: 97 QLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
I LN + + +TD++ +N +SQ RAD +K+ L R R +
Sbjct: 333 ARIGDALNTTRG-SVLVMGYTDNVPIRGLRYASNWELSQARADTVKAQLQARLSDPGR-V 390
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
G P+ ND+ R N+R+EI +
Sbjct: 391 RAEGRGAADPVAPNDSPANRARNRRVEITLL 421
>gi|157889011|dbj|BAF80958.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 2/148 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
K+ + + G ++ IG T + H F + + +
Sbjct: 176 APKTPQTTTKQIEEKPQTKQIDKSCPEPRKGALLDHIGCEKTIALEGHFGF-DQTSINPE 234
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F +Q + +L + P ++ HTDS G+ N +S ERA + +++ +
Sbjct: 235 FAQKIQEVGKVLEENPQYYTILEGHTDSTGSKTYNQKLSLERAKAVAKE-LEKSGVAKEK 293
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
I+ +G+ + P +NDTK GR N+R+E
Sbjct: 294 IATKGYGFDKPKASNDTKEGRAQNRRVE 321
>gi|241663267|ref|YP_002981627.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12D]
gi|240865294|gb|ACS62955.1| OmpA/MotB domain protein [Ralstonia pickettii 12D]
Length = 431
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 66/187 (35%), Gaps = 12/187 (6%)
Query: 5 LGLSMFIMTTISGCGLASR----EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ +++ + + G + + + + S V KR D+ +
Sbjct: 230 IVIAVVVTALVIGLAWVTYRQHLDNQALASQVSALEAQVAKRQEPLEDRIARALTSETGA 289
Query: 61 TGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ +S GD I + + L+ +A +L + I HTD
Sbjct: 290 SQFGLSTEGDRIYIVFSSGMGFAAGSADITPMLARQLERLAGVLTT--DGKVTIVGHTDD 347
Query: 120 ----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
G + NL +S RA + +Q S +S G K P+ N T GR N
Sbjct: 348 SPGARGRTETNLALSAARAMAVGRN-LQAHGLSETRLSTMGRGAKEPVGDNKTAEGRALN 406
Query: 176 QRIEIQI 182
+R+EI +
Sbjct: 407 RRVEIVL 413
>gi|42521782|ref|NP_967162.1| chemotaxis motB protein [Bdellovibrio bacteriovorus HD100]
gi|39574312|emb|CAE77816.1| chemotaxis motB protein [Bdellovibrio bacteriovorus HD100]
Length = 249
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 58/157 (36%), Gaps = 6/157 (3%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
K V SLDK+ D Q +L + +G I L+
Sbjct: 87 PKKGGPGEVEDYVERSLDKSMDSAQKKLAIQDVYHDAVGVRIALAA-STFFQEGSAKLKP 145
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGV 146
+ L L +A +L I I+ HTD + +N ++ RA + YL++
Sbjct: 146 EALKSLDKVADVLKTHKK-RIIIEGHTDDLPIAGTLFPSNWELAGGRASAVVRYLVKVHQ 204
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + P+ ND+ R N+RIEI I
Sbjct: 205 MDPKRFVSLSYGDQKPVVPNDSDEHRAMNRRIEIFIV 241
>gi|298386938|ref|ZP_06996492.1| flagellar motor protein MotB [Bacteroides sp. 1_1_14]
gi|298260088|gb|EFI02958.1| flagellar motor protein MotB [Bacteroides sp. 1_1_14]
Length = 280
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 4/152 (2%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
N++ L+ +D D V + G + + L+K+ L
Sbjct: 114 AQNEKVKQLLNSVKDALLGFSTDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALG 173
Query: 98 LIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+A +LNK + I+ HTD+ K+N +S RA + LI+ + I
Sbjct: 174 KLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYGVNPLQIQ 233
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+D N+T GR N+R EI + P+
Sbjct: 234 PSGRGEYMPVDDNETAEGRSKNRRTEIIMAPK 265
>gi|169633791|ref|YP_001707527.1| putative outer membrane lipoprotein [Acinetobacter baumannii SDF]
gi|169796445|ref|YP_001714238.1| putative outer membrane lipoprotein [Acinetobacter baumannii AYE]
gi|184157625|ref|YP_001845964.1| outer membrane protein [Acinetobacter baumannii ACICU]
gi|215483907|ref|YP_002326132.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB307-0294]
gi|301345916|ref|ZP_07226657.1| OmpA/MotB domain protein [Acinetobacter baumannii AB056]
gi|301512888|ref|ZP_07238125.1| OmpA/MotB domain protein [Acinetobacter baumannii AB058]
gi|332854748|ref|ZP_08435526.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332865708|ref|ZP_08436518.1| OmpA family protein [Acinetobacter baumannii 6013113]
gi|332874587|ref|ZP_08442488.1| OmpA family protein [Acinetobacter baumannii 6014059]
gi|169149372|emb|CAM87256.1| putative outer membrane lipoprotein [Acinetobacter baumannii AYE]
gi|169152583|emb|CAP01565.1| putative outer membrane lipoprotein [Acinetobacter baumannii]
gi|183209219|gb|ACC56617.1| Outer membrane protein [Acinetobacter baumannii ACICU]
gi|213986628|gb|ACJ56927.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB307-0294]
gi|322507933|gb|ADX03387.1| Putative outer membrane lipoprotein [Acinetobacter baumannii
1656-2]
gi|323517525|gb|ADX91906.1| Outer membrane protein [Acinetobacter baumannii TCDC-AB0715]
gi|332727834|gb|EGJ59237.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332735135|gb|EGJ66217.1| OmpA family protein [Acinetobacter baumannii 6013113]
gi|332737225|gb|EGJ68151.1| OmpA family protein [Acinetobacter baumannii 6014059]
Length = 255
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 3/131 (2%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ QL I D + I L + +L +A LNK +
Sbjct: 128 QLFSQLSVNQAEQKIIDDALKNRIIE--FESGSAVLTEAGQKILDEMAVALNKVGGKKVK 185
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTDS G NL +SQ+RA +K+YLI + +S G P+ N + GR
Sbjct: 186 IVGHTDSSGDATKNLKLSQDRALAVKNYLISK-NIPADHLSTEGLGSSKPVADNTSAEGR 244
Query: 173 QNNQRIEIQIF 183
+ N+RIE +
Sbjct: 245 KKNRRIEFTVL 255
>gi|108808116|ref|YP_652032.1| putative OmpA family protein [Yersinia pestis Antiqua]
gi|108812385|ref|YP_648152.1| OmpA family protein [Yersinia pestis Nepal516]
gi|145599315|ref|YP_001163391.1| OmpA family protein [Yersinia pestis Pestoides F]
gi|162419405|ref|YP_001606412.1| SciP protein [Yersinia pestis Angola]
gi|165925389|ref|ZP_02221221.1| SciP protein [Yersinia pestis biovar Orientalis str. F1991016]
gi|165937006|ref|ZP_02225571.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
biovar Orientalis str. IP275]
gi|166008588|ref|ZP_02229486.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166214237|ref|ZP_02240272.1| SciP protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167399212|ref|ZP_02304736.1| SciP protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421156|ref|ZP_02312909.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167424473|ref|ZP_02316226.1| SciP protein [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|229838286|ref|ZP_04458445.1| putative OmpA family protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229895433|ref|ZP_04510605.1| putative OmpA family protein [Yersinia pestis Pestoides A]
gi|229898850|ref|ZP_04513995.1| putative OmpA family protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229902751|ref|ZP_04517868.1| putative OmpA family protein [Yersinia pestis Nepal516]
gi|270490077|ref|ZP_06207151.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
KIM D27]
gi|108776033|gb|ABG18552.1| OmpA family protein [Yersinia pestis Nepal516]
gi|108780029|gb|ABG14087.1| putative OmpA family protein [Yersinia pestis Antiqua]
gi|145211011|gb|ABP40418.1| OmpA family protein [Yersinia pestis Pestoides F]
gi|162352220|gb|ABX86168.1| SciP protein [Yersinia pestis Angola]
gi|165914869|gb|EDR33481.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
biovar Orientalis str. IP275]
gi|165922996|gb|EDR40147.1| SciP protein [Yersinia pestis biovar Orientalis str. F1991016]
gi|165992970|gb|EDR45271.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166204593|gb|EDR49073.1| SciP protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960645|gb|EDR56666.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167051716|gb|EDR63124.1| SciP protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167056355|gb|EDR66124.1| SciP protein [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|229680198|gb|EEO76297.1| putative OmpA family protein [Yersinia pestis Nepal516]
gi|229688398|gb|EEO80469.1| putative OmpA family protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229694652|gb|EEO84699.1| putative OmpA family protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229701588|gb|EEO89615.1| putative OmpA family protein [Yersinia pestis Pestoides A]
gi|262366676|gb|ACY63233.1| OmpA family protein [Yersinia pestis D182038]
gi|270338581|gb|EFA49358.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
KIM D27]
gi|320014519|gb|ADV98090.1| putative OmpA family protein [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 278
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 71/185 (38%), Gaps = 9/185 (4%)
Query: 5 LGLSMFIMTTISGCG--LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
L I+ T GC L+ E + + +V + + + ++
Sbjct: 94 LLCGFLIVATFIGCKYFLSVPESDLLKRMGALQRVVVTPPVAAPKLRLSILLKDEIAKQL 153
Query: 63 IVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + + V + + + +++ +A +++ I I HTDS+
Sbjct: 154 VSVDETSNNSKVIFKGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGA-ILIVGHTDSMP 212
Query: 122 TLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
K N ++S++RA + Y+ ++ I G P+ +ND GR N+R
Sbjct: 213 INKPGFPNNQVLSEKRAANVARYM-EQAGIPTDKIRFEGKGETQPVSSNDDATGRSQNRR 271
Query: 178 IEIQI 182
+EI +
Sbjct: 272 VEIFV 276
>gi|29348538|ref|NP_812041.1| putative flagellar motor protein MotB [Bacteroides thetaiotaomicron
VPI-5482]
gi|253569097|ref|ZP_04846507.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|29340443|gb|AAO78235.1| putative flagellar motor protein MotB [Bacteroides thetaiotaomicron
VPI-5482]
gi|251841116|gb|EES69197.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 280
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 4/152 (2%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
N++ L+ +D D V + G + + L+K+ L
Sbjct: 114 AQNEKVKQLLNSVKDALLGFSTDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALG 173
Query: 98 LIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+A +LNK + I+ HTD+ K+N +S RA + LI+ + I
Sbjct: 174 KLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYGVNPLQIQ 233
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+D N+T GR N+R EI + P+
Sbjct: 234 PSGRGEYMPVDDNETAEGRSKNRRTEIIMAPK 265
>gi|326796261|ref|YP_004314081.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326547025|gb|ADZ92245.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 213
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 72/193 (37%), Gaps = 7/193 (3%)
Query: 2 IK----ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+K + + + +S A+ + D D + + +
Sbjct: 1 MKWMSVSITFCLLSASLLSNISQANTLLSPSIYERLKDQDKDG-VIDARDTCPDTPLKSL 59
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + G + + L+ K+ P L + L K P+T+ I HT
Sbjct: 60 IDNNGCPSHTV--KTLSSELDVHFETGKYNLKPKYYPGLVELGKFLQKNPNTIAIITGHT 117
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D IG ++N ++SQ RA I L ++ I G+ P+ N+T V R+ N+R
Sbjct: 118 DDIGDEESNEILSQRRAQSIAKALSEKFKIDIERIVALGYGESRPMYPNETDVERRKNRR 177
Query: 178 IEIQIFPRGNIKK 190
++ + + K+
Sbjct: 178 VQASVVSKFQAKE 190
>gi|294339857|emb|CAZ88220.1| putative outer membrane OmpA/MotB protein [Thiomonas sp. 3As]
Length = 293
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 7/158 (4%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEK 90
V K +K + ++ + V + I V F + L
Sbjct: 98 GGPGAKEVQKTLQGVAEKIQTLLASAIRKGDVRVRMTPLGVVIDIHDTVLFASGQAALTP 157
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN----LLISQERADVIKSYLIQRGV 146
+ +L IA +L + I + TD +S RA + I++GV
Sbjct: 158 QAQDLLNQIAGVLQGV-AYPIQVNGFTDDRPINTPQFGSNWALSSARAVSVVEMFIEQGV 216
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ ++ G+ +P+++NDT GR N+R+ + I
Sbjct: 217 KPEQLVAA-GYGQYHPVESNDTAKGRAANRRVSVVIVS 253
>gi|218690723|ref|YP_002398935.1| putative outer membrane lipoprotein [Escherichia coli ED1a]
gi|218428287|emb|CAR09211.2| putative outer membrane lipoprotein [Escherichia coli ED1a]
gi|315298676|gb|EFU57930.1| OmpA family protein [Escherichia coli MS 16-3]
Length = 160
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLLAPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N ++S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEVLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|78484555|ref|YP_390480.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78362841|gb|ABB40806.1| OmpA family protein [Thiomicrospira crunogena XCL-2]
Length = 314
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Query: 62 GIVVSRIG-DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDS 119
G+ V++ G + + + V + + P+L + L I I TDS
Sbjct: 166 GVTVNQYGCEPKSLVVTNIVFDLGSYKIRPDQKPILDKDISQLRSLKDHERIVITGFTDS 225
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+G+ +NL +S RA K YL+++ I V G P+ TN TK GR+ N+RI
Sbjct: 226 LGSESSNLKLSWNRAQATKDYLVRKFKYDPASILVLGKGEANPVATNKTKEGRKQNRRIS 285
Query: 180 IQIFPRGNI 188
I + +
Sbjct: 286 FMIMDQQIV 294
>gi|325105320|ref|YP_004274974.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324974168|gb|ADY53152.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 278
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 44 GSSLDKAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLI 99
+ + +++ Q L QD G+ V + + + F S ++++ L +
Sbjct: 119 DEASNALKNKLQKALLGFQDKGLTVEMRDGKVYVSLTDKLLFASGSIVIDERGKQALHEL 178
Query: 100 ATILNKFPSTVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
A ILN P IA++ HTD+ G +K+N +S RA + +L S I
Sbjct: 179 AVILNTQPEINIAVEGHTDNQRVVNLGQIKDNWDLSVLRATSVVRFLTVDEKISPNRIMA 238
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G PI T+++ R N+RIEI + P+
Sbjct: 239 TGKGEFQPISTDNSAESRSKNRRIEIVLSPK 269
>gi|304412567|ref|ZP_07394172.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307303583|ref|ZP_07583336.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|304349043|gb|EFM13456.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306912481|gb|EFN42904.1| OmpA/MotB domain protein [Shewanella baltica BA175]
Length = 369
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 50/109 (45%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++K F ++ +A LNK P + I H ++G + N+++S +RA
Sbjct: 252 DVGSIQFANDSAVVKKVFYKDIERLANYLNKNPEFTVEIAGHASNVGKPEYNMVLSDKRA 311
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
D + L+++ S ++ G+ P+ D+K N+RIE +
Sbjct: 312 DAVAQILVEKYGISKNRVTSNGYGVTQPLVAGDSKEAYAANRRIEAIVT 360
>gi|126173289|ref|YP_001049438.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|125996494|gb|ABN60569.1| OmpA/MotB domain protein [Shewanella baltica OS155]
Length = 363
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 50/109 (45%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++K F ++ +A LNK P + I H ++G + N+++S +RA
Sbjct: 246 DVGSIQFANDSAVVKKVFYKDIERLANYLNKNPEFTVEIAGHASNVGKPEYNMVLSDKRA 305
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
D + L+++ S ++ G+ P+ D+K N+RIE +
Sbjct: 306 DAVAQILVEKYGISKNRVTSNGYGVTQPLVAGDSKEAYAANRRIEAIVT 354
>gi|330815362|ref|YP_004359067.1| OmpA/MotB [Burkholderia gladioli BSR3]
gi|327367755|gb|AEA59111.1| OmpA/MotB [Burkholderia gladioli BSR3]
Length = 345
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 7/146 (4%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + ++ + GI+ + + L + +L
Sbjct: 205 ASDMANQLNPTYTIRNALRVSASEQGILDQTLANRTIE------FETGSATLTPQGRAIL 258
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++K + + I HTD+ G N+ +SQ RAD + + +++ ++ G
Sbjct: 259 DQMADAMSKLANRQVTIIGHTDNSGNRATNISLSQARADAV-KGYLVAKGIASQQLTTTG 317
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
PI +NDT GR N+RIE ++
Sbjct: 318 VGPDQPIASNDTADGRARNRRIEFRV 343
>gi|2853603|gb|AAC08067.1| MotB [Pseudomonas putida]
Length = 285
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K ++ + D D F + + V I + + F
Sbjct: 84 KDSEQTEAGLAATNVDPLKTISDDVRDAFGDLINSNQMTVRGNELWIEIELSSSLLFGSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K ++ +A+IL F + + ++ TD++ N +S RA I
Sbjct: 144 DAMPSDKAFAIIDKVASILKPFAN-PVHVEGFTDNLPIRTAQYPTNWELSSARAASIVRL 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV+ R SV G+ P+ NDT GR N+R+ + I +++
Sbjct: 203 LAMEGVNPARMASV-GYGEYQPVAGNDTAEGRARNRRVVLVISRNLEVRR 251
>gi|51596980|ref|YP_071171.1| OmpA/MotB family protein [Yersinia pseudotuberculosis IP 32953]
gi|170023725|ref|YP_001720230.1| type VI secretion system OmpA/MotB family protein [Yersinia
pseudotuberculosis YPIII]
gi|186896063|ref|YP_001873175.1| type VI secretion system OmpA/MotB family protein [Yersinia
pseudotuberculosis PB1/+]
gi|51590262|emb|CAH21899.1| possible OmpA/MotB family protein [Yersinia pseudotuberculosis IP
32953]
gi|169750259|gb|ACA67777.1| type VI secretion system OmpA/MotB family protein [Yersinia
pseudotuberculosis YPIII]
gi|186699089|gb|ACC89718.1| type VI secretion system OmpA/MotB family protein [Yersinia
pseudotuberculosis PB1/+]
Length = 458
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 71/185 (38%), Gaps = 9/185 (4%)
Query: 5 LGLSMFIMTTISGCG--LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
L I+ T GC L+ E + + +V + + + ++
Sbjct: 274 LLCGFLIVATFIGCKYFLSVPESDLLKRMGALQRVVVTPPVAAPKLRLSILLKDEIAKQL 333
Query: 63 IVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + + V + + + +++ +A +++ I I HTDS+
Sbjct: 334 VSVDETSNNSKVIFKGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGA-ILIVGHTDSMP 392
Query: 122 TLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
K N ++S++RA + Y+ ++ I G P+ +ND GR N+R
Sbjct: 393 INKPGFPNNQVLSEKRAANVARYM-EQAGIPTDKIRFEGKGETQPVSSNDDATGRSQNRR 451
Query: 178 IEIQI 182
+EI +
Sbjct: 452 VEIFV 456
>gi|269102083|ref|ZP_06154780.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161981|gb|EEZ40477.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 317
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 37/101 (36%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L L L + I + +TDS G+ N +S +RAD +
Sbjct: 200 FAFDSTELSAGDRAKLAPFEQRLQAQDAAQIYVVGYTDSRGSEAYNQKLSVKRADAVAEA 259
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L I G P+ +NDT GR N+R+EI
Sbjct: 260 LRSVMNVDGSRIIAEGRGESNPVASNDTAEGRAQNRRVEII 300
>gi|251772419|gb|EES52986.1| putative flagellar motor protein (OmpA/MotB) [Leptospirillum
ferrodiazotrophum]
Length = 285
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 5/129 (3%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + + I I F + + K+ +P+L+ IA +L+K I ++ HTD+
Sbjct: 102 GAMKVVQSSEGIRIQIQAAFLFRTGHAAVRKQAIPVLKNIAALLSKTK-RDIRVEGHTDN 160
Query: 120 ---IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
G KNN +S RA + + LI S G+ P+ N + RQ N+
Sbjct: 161 VPIHGRYKNNWALSSMRAVNVLTTLIALAPIDPSRASAAGYGQYRPLVPNTSAENRQKNR 220
Query: 177 RIEIQIFPR 185
R+EI +
Sbjct: 221 RVEIVVLKE 229
>gi|255035577|ref|YP_003086198.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254948333|gb|ACT93033.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 433
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 48/109 (44%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
V+ + L+ +A +L + P + I HTD+ G+ ++N+ +S
Sbjct: 323 RFTTHGIQFNVNSDEILPLSYGALKDVAQVLQENPGVKVQIVGHTDADGSDESNVQLSMR 382
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA+ +K + + G PID+NDT G+ NN+R+E
Sbjct: 383 RAEAVKKAMEAHFAIDGTRLQTDGKGESSPIDSNDTPTGKANNRRVEFI 431
>gi|39934843|ref|NP_947119.1| porin [Rhodopseudomonas palustris CGA009]
gi|39648693|emb|CAE27215.1| OmpA/MotB domain, possible porin [Rhodopseudomonas palustris
CGA009]
Length = 441
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++K P+L +A + + P+ I + +TD G N+ +S+ RA+ + +
Sbjct: 340 FERRSAVIDKASQPLLDKLAAAIKQCPAVTIEVAGYTDGAGKKSANIALSKRRAEAVVA- 398
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + + G+ PI NDT GR N+RIE +
Sbjct: 399 SLTKVGIGSVKLVAEGYGSAKPIAANDTAEGRAQNRRIEFVV 440
>gi|170722686|ref|YP_001750374.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169760689|gb|ACA74005.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 270
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
++ G ++ Q D G + + + L+ +
Sbjct: 125 ASVQQQGEWVEAQIAALASQQADRG---------LVMTLGDVLFDTGRADLKNSASRTVL 175
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ L P V+ I+ + D+ G ++NL +S++RA + L+ GV R + V G+
Sbjct: 176 KLVQFLQLNPRRVVRIEGYADNTGAPEDNLKLSRDRAQAVADMLVDLGVDEKR-LQVEGY 234
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQ 181
+YPI+ N ++ GR N+R+EI
Sbjct: 235 GDQYPIEANASERGRAQNRRVEIV 258
>gi|323978486|gb|EGB73569.1| OmpA family protein [Escherichia coli TW10509]
Length = 160
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 63/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLIFTSLVLTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTRARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEALSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|51246518|ref|YP_066402.1| flagellar motor protein (MotB) [Desulfotalea psychrophila LSv54]
gi|50877555|emb|CAG37395.1| related to flagellar motor protein (MotB) [Desulfotalea
psychrophila LSv54]
Length = 249
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 65/148 (43%), Gaps = 6/148 (4%)
Query: 48 DKAEDEFQMQLQDTGIV-VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNK 105
+K +++ + ++ + +++ D+I + V F + + + +L+ IA I+
Sbjct: 98 EKIKNKLKALRINSEVELINKDKDIIILRMDDKVLFARGQSEISPRSYMLLRNIADIIRP 157
Query: 106 FPSTVIAIQSHTDSIG---TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P + I+ H+D I N +S RA + + + S +S G+ +P
Sbjct: 158 LP-VNVRIEGHSDDIPLGINNIANWNLSTSRAVSALRFFYRGNLISLDRLSAIGYGDMHP 216
Query: 163 IDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
I N T+ R N+R++ + + KK
Sbjct: 217 IAPNTTEENRAKNRRVDFVLRLKPPKKK 244
>gi|302037886|ref|YP_003798208.1| putative OmpA/MotB family outer membrane protein [Candidatus
Nitrospira defluvii]
gi|300605950|emb|CBK42283.1| putative Outer membrane protein, ompA family [Candidatus Nitrospira
defluvii]
Length = 301
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 10/164 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + + +V + + T N A + Q+Q +
Sbjct: 144 GTSVHVQDQVTVASAGSTSPANLSPAGQPSPAPHASRAQVQAGLDEI--------LRGEH 195
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L K ++ + L + P +I I HTDS G + NL +S+ RA+ ++
Sbjct: 196 IAFESNSAVLTSKGRAVVDKLVPALKRAPEAIIEIGGHTDSYGDPEYNLQLSRTRAEAVR 255
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YL++ V ++ G+ P+ + T+ + N+RIE ++
Sbjct: 256 QYLVEHQVP--NRLTAVGYGSTRPLSQDRTRAASKKNRRIEFRV 297
>gi|299069126|emb|CBJ40378.1| putative outer membrane protein; OmpA/MotB domain [Ralstonia
solanacearum CMR15]
Length = 279
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 3/160 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--S 81
+ +V +H + ++ S + + ++ + +
Sbjct: 118 DGTQVAVHGDVQNEAQRQQLASDMATTLGASYTIKNGLRVAAVSEQSLLDQTLANRIIEF 177
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L K +L +A +L + I I HTD+ G+ NL +SQ RA+ +KSYL
Sbjct: 178 ETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHTDNSGSRAMNLNLSQARAETVKSYL 237
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I + + ++ G P+ N T GR N+RIE +
Sbjct: 238 ISK-GAEPGTLTAIGVGPDQPVAPNATDEGRSRNRRIEFR 276
>gi|157374997|ref|YP_001473597.1| OmpA domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157317371|gb|ABV36469.1| OmpA domain protein [Shewanella sediminis HAW-EB3]
Length = 179
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 58/178 (32%), Gaps = 7/178 (3%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + IS C S + S ++ G + Q
Sbjct: 8 KAMLVALPIMAISACSSTSESETDATSSTSGSGSELSTGSGVETGGVAPILTPEEQQRLK 67
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + + +F +LQ L + P+ + I+ H D GT
Sbjct: 68 YQELRKEHVI------YFDFDRSSVSMQFAEVLQAHGNYLVEHPNVRLMIEGHADERGTP 121
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA + +Q +S+ + + P+D + T G N+R +
Sbjct: 122 EYNIALGERRAKAVAK-YLQGMGVLPSQMSIVSYGEEKPLDMSRTDDGFAINRRAVLV 178
>gi|254253396|ref|ZP_04946714.1| Outer membrane protein [Burkholderia dolosa AUO158]
gi|124896005|gb|EAY69885.1| Outer membrane protein [Burkholderia dolosa AUO158]
Length = 317
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 10/161 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLD---KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ K +H + ++L+ ++ ++ + G++ + +
Sbjct: 162 EMKGEVHNEAQRQQIASDMANTLNPTYTIKNALRVSASEQGLLDQTLANRTIE------F 215
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L + +L +A L+K + + I HTD+ G +N+ +SQ RAD +K YL
Sbjct: 216 ETGSATLTPQGRQILDQMAAALSKLQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYL 275
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I + + ++ G PI ND GR N+RIE ++
Sbjct: 276 ITK-GIPPQQMTTTGVGPDQPIAPNDMAEGRARNRRIEFRV 315
>gi|312130324|ref|YP_003997664.1| v-type h(+)-translocating pyrophosphatase [Leadbetterella
byssophila DSM 17132]
gi|311906870|gb|ADQ17311.1| V-type H(+)-translocating pyrophosphatase [Leadbetterella
byssophila DSM 17132]
Length = 878
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 10/191 (5%)
Query: 1 MIKELGLSMFIMTTIS---GCGLASREKKKVFLHKSNDTDIV--NKRFGSSLD-KAEDEF 54
M + L + I+ + + ++ + V + S +D ED+
Sbjct: 692 MNILIKLMSIVSLVIAPYIATHSTIPTVEGQLVIETITVEKVLPSGTTLSFMDNGIEDQL 751
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++D S+ G+ +++ + ++ IA IL ++P I +
Sbjct: 752 IEFIEDEN---SKAGNDNWFNFVDLNFKRGSNDIDESSMEEVKNIAAILKEYPQVKIKVG 808
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+TD+ GT + NL +S+ERA +K LI S +S GF ++P+ N T+ GRQ
Sbjct: 809 GYTDNTGTPEGNLKLSEERATNVKKALIAL-GISEDRLSSEGFGQEHPVADNTTEEGRQK 867
Query: 175 NQRIEIQIFPR 185
N+RI I + +
Sbjct: 868 NRRIAISVREK 878
>gi|307824498|ref|ZP_07654723.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307734482|gb|EFO05334.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 265
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ E +QD + V + I + + F E L KK +P+LQ I ++N P
Sbjct: 98 QFEQVLAPFIQDNLVSVKKNDYWIELEMNSEMLFLSGEAELSKKAIPVLQKIVEVINPLP 157
Query: 108 STVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + I+ HTD+I ++N +S RA + + + + +S G+ +PI
Sbjct: 158 NM-VNIEGHTDNIPIDNIKFRSNWDLSSARATSVVHEFV-KEGINPPRLSAIGYGEFHPI 215
Query: 164 DTNDTKVGRQNNQRIEIQIFPRG 186
N + GR N+R+ + + +
Sbjct: 216 GDNKIEAGRFKNRRVVLVLMSQA 238
>gi|323700864|ref|ZP_08112776.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323460796|gb|EGB16661.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 392
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 64/177 (36%), Gaps = 9/177 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNK--RFGSSLDKAEDEFQMQLQDTGIVVSRIGD-----M 71
K + T ++ A +Q D
Sbjct: 214 ASTPEAVKAGLEAGPSATAQGRDLPPEQTAGTPAAAPAGQPVQGAAARKEPAEDEAPRPG 273
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLI 129
I+ + ++ L +L + LN +F I + HTD+ G + NL +
Sbjct: 274 ISGVDLNIQFDFDKATIQPASLAVLDALGETLNSPEFKGRSIIVGGHTDASGGAEYNLTL 333
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S++RA+ +KSYL+ + + I GF P+ T +Q N+R+EI++ +
Sbjct: 334 SKQRAEAVKSYLVDKWHINPDLIEAVGFGKSRPLTEGTTAADQQRNRRVEIRLAAQA 390
>gi|156974655|ref|YP_001445562.1| hypothetical protein VIBHAR_02373 [Vibrio harveyi ATCC BAA-1116]
gi|156526249|gb|ABU71335.1| hypothetical protein VIBHAR_02373 [Vibrio harveyi ATCC BAA-1116]
Length = 208
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 77/200 (38%), Gaps = 14/200 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K + + +F++ IS C ++ ++ ++ + D + D + +
Sbjct: 1 MKIIPI-LFMVCLISACSGSNSNRETGDEYEYIETPNADQIADLIDDDSDGVINA-RDLC 58
Query: 59 QDT--GIVVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
T G + G + +E F+ + ++ L ++P+T I
Sbjct: 59 PGTPEGSEIDNDGCGKYAKSSQQMQIRVLFANDSSAIEPVFVNQISDLSNFLKEYPTTSI 118
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+Q +T GT + NL +S+ RA+ ++ LI S + + GF +
Sbjct: 119 ELQGYTSITGTDEYNLALSKRRAESVRQELINN-GISPERLRIVGFGETNLASQGTDETS 177
Query: 172 RQNNQRIEIQIFP-RGNIKK 190
N+R+ + +G I+K
Sbjct: 178 HALNRRVTATVVGYKGEIEK 197
>gi|156325823|ref|XP_001618597.1| hypothetical protein NEMVEDRAFT_v1g224978 [Nematostella vectensis]
gi|156199492|gb|EDO26497.1| predicted protein [Nematostella vectensis]
Length = 563
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 11/142 (7%)
Query: 59 QDTGIVVSRIGDMIT----CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
D + V+ D I + ++ L + L + +N PS + I
Sbjct: 8 NDDTVRVTIYMDEIIKIPTFEVHNIYYDYNKDELRPSSVASLDTLVNFMNDNPSLSVEIY 67
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DT 168
S D+ G + N +S RA+ + SYL G+ +R + +GF P N D
Sbjct: 68 SFADAHGNPQYNRDLSLRRAESVMSYLETAGIERSRM-TAKGFGESMPAAANKNPDGSDN 126
Query: 169 KVGRQNNQRIEIQIFPRGNIKK 190
GRQ N+R E++I ++
Sbjct: 127 PAGRQLNRRTELRIISDDGTRR 148
>gi|170723153|ref|YP_001750841.1| peptidoglycan-associated lipoprotein [Pseudomonas putida W619]
gi|169761156|gb|ACA74472.1| peptidoglycan-associated lipoprotein [Pseudomonas putida W619]
Length = 165
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 55/165 (33%), Gaps = 21/165 (12%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + N N E + I
Sbjct: 21 GCSSKGGDNAGEGAVDPNAGYGANTGAVDGSLSEEAALRA-------------------I 61
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + + ++ +TD GT + N+ + + RA
Sbjct: 62 TTFYFEYDSSDLKPEAMRALDVHAKDLKSNGN-RVVLEGNTDERGTREYNMALGERRAKA 120
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+ + S + + + + P+ T + + N+R+E++
Sbjct: 121 VQRYLVLQ-GVSPAQLELVSYGEERPVATGNDEQSWAQNRRVELR 164
>gi|110636839|ref|YP_677046.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110279520|gb|ABG57706.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 1313
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ + ++ + + Q+++ + ++G+ T +P L +
Sbjct: 1164 AVQVEKEGYVNENTTLEISNGTNDQVKNFELTPIKVGE--TIRLPHVYFARGGTTLLESS 1221
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L + T+L P+ I + +TD+ G K N+L+S++R IK YL+ + + I
Sbjct: 1222 YESLDQLYTLLTDNPTMRIELLGYTDNQGDAKLNVLLSEQRVAAIKDYLVGK-GIAETRI 1280
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+G+ PI +N T+ RQ N+R+E +I +
Sbjct: 1281 GGKGYGGANPIASNATEETRQLNRRVEFKIVSK 1313
>gi|89093474|ref|ZP_01166422.1| flagellar motor protein [Oceanospirillum sp. MED92]
gi|89082164|gb|EAR61388.1| flagellar motor protein [Oceanospirillum sp. MED92]
Length = 313
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 7/174 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV- 80
S + + + + ++ D + V G I I
Sbjct: 116 SDSPDQEAGEQQELQKEQEQEAKEEAVEFAAALAEEIGDGSVEVETDGKKIIIRIKEKGS 175
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADV 136
L+ + +P+L I +L ++I+ H+D+I ++N +S RA
Sbjct: 176 FDSGSAELKFESIPVLAKIRDVLLDVKG-NVSIEGHSDNIPYAGRRFESNWDLSVARALA 234
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ L V G A P+ NDT+ R N+R+EI + +G K+
Sbjct: 235 VAHELFGDPRIDQSRFKVLGMADTKPLVPNDTRANRVKNRRVEIIVT-KGKDKE 287
>gi|269963652|ref|ZP_06177975.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831665|gb|EEZ85801.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 218
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 67/207 (32%), Gaps = 28/207 (13%)
Query: 2 IKELGLSMFIMTTISGCGL--ASREKKKVFLHKSNDT-----------DIVNKRFGSSLD 48
+K L ++GCG + L + T +
Sbjct: 12 MKHWFLV--ACGLLAGCGSINSDMVPGGNMLDTAPRTNSELRHPEWGYAKSYASTPRYVA 69
Query: 49 KAEDEFQMQLQD-----------TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
+A +LQ + GD + + V F L + L
Sbjct: 70 QAPSAMGKKLQGVTSLEMFLNRHQIAHETISGDHLMVRLKEQVHFQTGSARLSSQSEDWL 129
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ + L + I H DS G N +S++RA ++ L+ + R S RG
Sbjct: 130 RNLGHYLAGRTDVDVVIDGHADSTGAATFNDSLSEKRAREVEKQLLATSLPRQRVFS-RG 188
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIF 183
F P +N T G+ N+R+E+ +
Sbjct: 189 FGEYVPQCSNATASGKACNRRVELMLI 215
>gi|254488269|ref|ZP_05101474.1| OmpA domain protein [Roseobacter sp. GAI101]
gi|214045138|gb|EEB85776.1| OmpA domain protein [Roseobacter sp. GAI101]
Length = 632
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 2/163 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ + + + + +++ L
Sbjct: 438 TGNPDAGSQIATLLAGKLGEGQQYDIAVVYQEKLDPVLGLPTPEECEAQIGEVVKAGKIN 497
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ L + IA IL + IQ +TDS G + NL +SQ RA + +
Sbjct: 498 FEPGSATIDASALSTMDQIAEILKPCGDIALEIQGYTDSQGREEMNLALSQSRAQSVLNE 557
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L R V + F+ +GF + P+++NDT+ GR+ N+RIE ++
Sbjct: 558 LRARRVLTASFV-AKGFGEEAPVESNDTEEGREANRRIEFRLI 599
>gi|78778212|ref|YP_394527.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
gi|78498752|gb|ABB45292.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
Length = 348
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G V + G + + ++ + ++ +P ++ A L P+ I HTDS+G
Sbjct: 227 GHKVDKDGCSVLVDLHIN-FDTASYKVDNASMPKVKEFAEFLKDMPNYNAKIVGHTDSVG 285
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ K+N +S+ RA+ + LI + + I+ G K PI TNDTK G+ N+RIE +
Sbjct: 286 SDKDNQKLSENRANSV-KTLIVKEGIDTKRITTEGKGEKSPIATNDTKEGKAQNRRIEAE 344
Query: 182 IFPR 185
+ +
Sbjct: 345 LIKK 348
>gi|148254500|ref|YP_001239085.1| putative outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Bradyrhizobium
sp. BTAi1]
gi|146406673|gb|ABQ35179.1| putative outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Bradyrhizobium
sp. BTAi1]
Length = 707
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 3/147 (2%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
TD L + + + L ++ L +
Sbjct: 563 TDAAGGDV--KLADVRIGLKPESPPLPTEACQPAFNGLLAKGRIRFDTGSAELSRESLAL 620
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L I + + I I+ HTD++G ++N+ +S+ RA + Y+ + G+ ++R S
Sbjct: 621 LDHIVVVAQRCKDAEIVIEGHTDNVGDEEDNMDLSKRRAVAVVGYIGEAGIDTSRMTSA- 679
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G+ PI +NDT GR N+RIE +
Sbjct: 680 GYGQTRPIASNDTAEGRAQNRRIEFVV 706
>gi|114799158|ref|YP_761149.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
gi|114739332|gb|ABI77457.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
Length = 297
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 64/173 (36%), Gaps = 1/173 (0%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
+ + + +A + + + L + + ++
Sbjct: 125 VASAEAATTVAENRADRSDAVAAGAVADSAASETARLAAEARAAALTAELADYEQTKTDL 184
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+T + L L +A+ L+K P + I I HTDS G N +S
Sbjct: 185 GVTLILRDLQFASGSALLTSGAQGRLAPLASYLSKQPESRIQIAGHTDSQGAEAYNQDLS 244
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + +YL GV S R ++ G P+ +NDT GR N+R+EI I
Sbjct: 245 ARRAASVGTYLASTGVDSGRINTI-GLGESTPLSSNDTAAGRAINRRVEITIL 296
>gi|330875706|gb|EGH09855.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
gi|330967020|gb|EGH67280.1| ompA family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 271
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + ++ + + + L+ + + L
Sbjct: 126 ASAQQQGRWLEDQILS--LATTQTDRGLVMTLGDVLFDAGHAELKSSASRTILKVVQFLQ 183
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P V+ I+ +TDS G + NL +S++RA + ++ + I V G+ ++P+D
Sbjct: 184 INPRRVVRIEGYTDSTGDREENLTLSKDRAQAVAD-VLTDLGVDEKRIQVEGYGQQFPVD 242
Query: 165 TNDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 243 ANASERGRAQNRRVEIV 259
>gi|260682442|ref|YP_003213727.1| putative chemotaxis protein [Clostridium difficile CD196]
gi|260686041|ref|YP_003217174.1| putative chemotaxis protein [Clostridium difficile R20291]
gi|260208605|emb|CBA61322.1| putative chemotaxis protein [Clostridium difficile CD196]
gi|260212057|emb|CBE02637.1| putative chemotaxis protein [Clostridium difficile R20291]
Length = 248
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 56/141 (39%), Gaps = 6/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
++ + + + + + + F + ++ + I +LN+
Sbjct: 95 EEIQKYLNENGMANSVSLRVQDRGLVISLKDTILFDTGKAVVKDNSRDKIIQIGKMLNEM 154
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
S + ++ HTD++ K+N +S RA + LI + +S G+ P
Sbjct: 155 NSY-MRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDKLSAVGYGEFRP 213
Query: 163 IDTNDTKVGRQNNQRIEIQIF 183
I N ++ GR N+R++I +
Sbjct: 214 IAENSSEEGRSKNRRVDIVLV 234
>gi|327312584|ref|YP_004328021.1| OmpA family protein [Prevotella denticola F0289]
gi|326944583|gb|AEA20468.1| OmpA family protein [Prevotella denticola F0289]
Length = 288
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 66/141 (46%), Gaps = 12/141 (8%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +L++ + V + ++ + ++ + + ++ L IA I+ + + I
Sbjct: 132 REELKE--VDVQVLKGVVYISLADNMLYKSGSYEVNERAEQTLSKIAKIITDYKDYDVLI 189
Query: 114 QSHTDSIGTL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ +TD++ +NN +S RA + YL R + + ++ G PI
Sbjct: 190 EGNTDNVPINTANDKMKNIRNNWDLSCLRAASVVQYLQDRFGVNPKRLTAGGRGEYNPIA 249
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
TNDT++G+Q N+R +I I P+
Sbjct: 250 TNDTELGKQRNRRTQIIITPK 270
>gi|238650590|ref|YP_002916442.1| peptidoglycan-associated lipoprotein precursor [Rickettsia
peacockii str. Rustic]
gi|238624688|gb|ACR47394.1| peptidoglycan-associated lipoprotein precursor [Rickettsia
peacockii str. Rustic]
Length = 155
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 61/182 (33%), Gaps = 30/182 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ L+ + ++GC R + ++ + K F +
Sbjct: 1 MKTKITLAFLALCVLAGCNTTKRAPQFDGNMNQSEETSLMKDF------------EKHAG 48
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ L K L+ A L+K P + ++ H D
Sbjct: 49 NAVW----------------FAFDSSALSPKAKEELERQACWLSKHPEVKVTVEGHCDER 92
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IE 179
GT NL + + RA K +L +G+ NR ++ + P +T+ N+R +
Sbjct: 93 GTKNYNLGLGERRAAAAKKFLAHKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVT 151
Query: 180 IQ 181
+
Sbjct: 152 VV 153
>gi|254453865|ref|ZP_05067302.1| OmpA domain protein [Octadecabacter antarcticus 238]
gi|198268271|gb|EDY92541.1| OmpA domain protein [Octadecabacter antarcticus 238]
Length = 311
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 53/124 (42%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
TG + + D + V L LQ +A L P +A+ HTD
Sbjct: 186 TGDLAQSLEDQGRFILSGLVFETGSAQLGDAIFGSLQYLADYLIANPDRTVALVGHTDFF 245
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+L N+ +S+ RA + L+ + +G Y P+ +N T+ GR+ N+R+E+
Sbjct: 246 GSLDGNIALSKRRAGSVLERLVTTYDIPRHQLDAQGMGYLSPVASNLTEEGREANRRVEV 305
Query: 181 QIFP 184
I
Sbjct: 306 IITS 309
>gi|170731810|ref|YP_001763757.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169815052|gb|ACA89635.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 316
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 10/161 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLD---KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ K +H + ++L+ ++ ++ + G++ + +
Sbjct: 161 EMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTIE------F 214
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL
Sbjct: 215 ETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYL 274
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I + + ++ G PI NDT GR N+RIE ++
Sbjct: 275 ITK-NIPPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRV 314
>gi|311748659|ref|ZP_07722444.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Algoriphagus sp. PR1]
gi|126577188|gb|EAZ81436.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Algoriphagus sp. PR1]
Length = 643
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 59/137 (43%), Gaps = 6/137 (4%)
Query: 52 DEFQMQLQDTGIVVSRIGDMIT----CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
++ ++ + + + + D + + + + + L + IL P
Sbjct: 504 EDLIQEVTNITLDTTIVLDQLILDKSIVLENIYYDLDKADIRPDAAVELDKLVQILKDNP 563
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
S I + SHTD + + N +SQ RA Y++ +G+S++R + +G+ I N
Sbjct: 564 SIKIELSSHTDDRSSDEYNQDLSQRRAQSAVDYIVSQGISADRLV-AKGYGESQLIIENA 622
Query: 168 -TKVGRQNNQRIEIQIF 183
T+ Q N+R E ++
Sbjct: 623 TTEEEHQTNRRTEFKVI 639
>gi|171318547|ref|ZP_02907697.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria MEX-5]
gi|171096248|gb|EDT41156.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria MEX-5]
Length = 460
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 48/163 (29%), Gaps = 4/163 (2%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSE 85
+ K ++ + + D + F
Sbjct: 296 RQARLPQGGGSPEPASVRQYAPKLAVLLAPEIARRTLQIDETADRAVITLNSDGLFASGS 355
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAI--QSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ + +++ I L P VI + + +N +S +RA + L
Sbjct: 356 ARVLPSQVSVIRRIGDALRDVPGRVIVVGHTDNQPPSPGKPSNWQLSLDRAGSVVQLLRD 415
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
RF+ +G P+ +D+ R N+R+ I + G
Sbjct: 416 EAGGLERFL-AQGRGESEPVAPDDSAADRARNRRVVITVLAPG 457
>gi|254246487|ref|ZP_04939808.1| OmpA/MotB [Burkholderia cenocepacia PC184]
gi|124871263|gb|EAY62979.1| OmpA/MotB [Burkholderia cenocepacia PC184]
Length = 316
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 10/161 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLD---KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ K +H + ++L+ ++ ++ + G++ + +
Sbjct: 161 EMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTIE------F 214
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL
Sbjct: 215 ETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYL 274
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I + + ++ G PI NDT GR N+RIE ++
Sbjct: 275 ITK-NIPPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRV 314
>gi|315649793|ref|ZP_07902876.1| OmpA/MotB domain protein [Paenibacillus vortex V453]
gi|315274767|gb|EFU38148.1| OmpA/MotB domain protein [Paenibacillus vortex V453]
Length = 270
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 69/178 (38%), Gaps = 13/178 (7%)
Query: 20 LASREKKKVFLHKSNDTD------IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
A E K+ ++ T+ + + + + + + I +S I
Sbjct: 91 TAVTEDKEEDNGEAPLTERELAFRAQEEELANFMGLIQQYVKDNQLEEDIFISDEPQGIA 150
Query: 74 CYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNL 127
+ F + L+ P+L +A++ +T ++I+ HTD++ K+N
Sbjct: 151 ITLSDRFLFDVGKAELKSGAAPVLGKLASLFGDL-NTTVSIEGHTDNVPIGRHSSYKDNW 209
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S RA + + ++ G+A P N T G+Q N+R+EI + +
Sbjct: 210 ELSGARAMSVLRFFLEDSKLDPAGFQYAGYADTRPAADNATPEGKQKNRRVEITVLRQ 267
>gi|146343548|ref|YP_001208596.1| putative outer membrane protein (ompA-like) [Bradyrhizobium sp.
ORS278]
gi|146196354|emb|CAL80381.1| conserved hypothetical protein; putative outer membrane protein
(ompA-like) [Bradyrhizobium sp. ORS278]
Length = 464
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 62/161 (38%), Gaps = 1/161 (0%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S + T + KAE + V +
Sbjct: 304 SGDALYDAAAAQIRTGLAKDVPQGWQVKAEITVKPAAAPVDPTVCQQLFSDLLGKAKIRF 363
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L++ +L + I + P+ + I HTD+ G N ++SQ+RA + YL
Sbjct: 364 ETGRSDLDRDSTGLLDRLVEIAFRCPTANVDIIGHTDAEGDSAANQVLSQKRAQAVADYL 423
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ G+ ++R + G+ PI +NDT GR N+RIE +
Sbjct: 424 VKAGLPADR-FTPIGYGSTQPIASNDTAEGRTQNRRIEFVV 463
>gi|326800605|ref|YP_004318424.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326551369|gb|ADZ79754.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 441
Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ + D + + G + + + + +L+ IA+IL + + I
Sbjct: 313 KIAKGMPDGRTKLQKEG---KFSTTGILFSTGQATILPESEGVLKFIASILAEDQAAKIQ 369
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+ HTD++G K+N ++S+ RA+ +K L R + + G P+ N T GR
Sbjct: 370 VVGHTDAVGDDKSNQILSERRAEAVKRALTTRYGIAEISLQTSGKGESEPVADNQTVKGR 429
Query: 173 QNNQRIEIQ 181
N+R+E
Sbjct: 430 TRNRRVEFI 438
>gi|157889051|dbj|BAF80990.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ IG T + H F + + +F +Q + IL + P ++ HTDS
Sbjct: 205 KGALLDHIGCEKTIALEGHFGF-DQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDST 263
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S ERA+ + +++ + I +G+ ++ P +NDTK GR N+R+E
Sbjct: 264 GPKAYNQKLSLERANAVAKE-LEKTGVAKEKIVTKGYGFEKPKASNDTKEGRAQNRRVE 321
>gi|157889046|dbj|BAF80986.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ IG T + H F + + +F +Q + IL + P ++ HTDS
Sbjct: 205 KGALLDHIGCEKTIALEGHFGF-DQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDST 263
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S ERA+ + +++ + I +G+ ++ P +NDTK GR N+R+E
Sbjct: 264 GPKAYNQKLSLERANAVAKE-LEKTGVAKEKIVTKGYGFEKPKASNDTKEGRAQNRRVE 321
>gi|157889041|dbj|BAF80982.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ IG T + H F + + +F +Q + IL + P ++ HTDS
Sbjct: 205 KGALLDHIGCEKTIALEGHFGF-DQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDST 263
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S ERA+ + +++ + I +G+ ++ P +NDTK GR N+R+E
Sbjct: 264 GPKAYNQKLSLERANAVAKE-LEKTGVAKEKIVTKGYGFEKPKASNDTKEGRAQNRRVE 321
>gi|157889031|dbj|BAF80974.1| fibronectin-binding protein [Campylobacter lari]
gi|157889036|dbj|BAF80978.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ IG T + H F + + +F +Q + IL + P ++ HTDS
Sbjct: 205 KGALLDHIGCEKTIALEGHFGF-DQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDST 263
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S ERA+ + +++ + I +G+ ++ P +NDTK GR N+R+E
Sbjct: 264 GPKAYNQKLSLERANAVAKE-LEKTGVAKEKIVTKGYGFEKPKASNDTKEGRAQNRRVE 321
>gi|83949579|ref|ZP_00958312.1| OmpA family protein [Roseovarius nubinhibens ISM]
gi|83837478|gb|EAP76774.1| OmpA family protein [Roseovarius nubinhibens ISM]
Length = 171
Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 64/175 (36%), Gaps = 7/175 (4%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
+++ + ++G + ++ +K + + + D E GI V
Sbjct: 1 MALGVTMLVAGTPIEAQSRKNDYTPTIWVDPDGCEHWVMD-DGWEGYMSPHTNRQGIPVC 59
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
R G++ + + LQ + I HTDS + N
Sbjct: 60 RRGNVCGVMNSDQLFATDSANISPSGRARLQQ---FFRDANAVSYIITGHTDSRASDAYN 116
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +S RA+ + +Q G R VRG+ + P +N T G Q N+R+EI
Sbjct: 117 MNLSLRRANSVARVAVQTG---ARIADVRGYGERMPKASNATAAGMQANRRVEII 168
>gi|330811386|ref|YP_004355848.1| OmpA family lipoprotein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379494|gb|AEA70844.1| Putative OmpA family lipoprotein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 165
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 21/165 (12%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + N N E + I
Sbjct: 21 GCSSKGGDNAGEGAVDPNAGYGANTGAVDGSLSEEAALRA-------------------I 61
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + ++ +TD GT + N+ + + RA
Sbjct: 62 TTFYFEYDSSDLKPEAMRALDVHAKDLKSN-GARVVLEGNTDERGTREYNMALGERRAKA 120
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+ + S + + + + P+ T + + N+R+E++
Sbjct: 121 VQRYLVLQ-GVSPAQLELVSYGEERPVATGNDEQSWAQNRRVELR 164
>gi|218676173|ref|YP_002394992.1| outer membrane protein OmpA [Vibrio splendidus LGP32]
gi|218324441|emb|CAV25864.1| outer membrane protein OmpA [Vibrio splendidus LGP32]
Length = 353
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L + L + +L P + + + HTDS G + N++IS++RA
Sbjct: 227 SFSQGMFETNSTELSSEGKTALIPLVEVLQAHPQSSVNVVGHTDSTGAAEYNMMISKKRA 286
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + I+ + I+ G + P+ +N T GR N+R++ I
Sbjct: 287 AAVAA-YIEEQGIAADRIAASGEGEENPVASNATAEGRAQNRRVDATI 333
>gi|26987858|ref|NP_743283.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|24982561|gb|AAN66747.1|AE016303_2 OmpA family protein [Pseudomonas putida KT2440]
Length = 264
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L LQ + LN + + HTDS+G+ N +S+ RA +
Sbjct: 161 VMFAFDSAELTPAAQQRLQGLVEKLNSPTVAKVRVIGHTDSVGSDSYNQALSERRASSVA 220
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YLI + ++ +G P+ N+T+ GR N+R+E+ +
Sbjct: 221 EYLIGQ-GLEMGKVTSQGRGESEPVTDNETEEGRARNRRVELHL 263
>gi|325271956|ref|ZP_08138407.1| flagellar motor protein MotD [Pseudomonas sp. TJI-51]
gi|324102904|gb|EGC00300.1| flagellar motor protein MotD [Pseudomonas sp. TJI-51]
Length = 285
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 7/169 (4%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSE 85
++ + D D F ++ + V I + + F +
Sbjct: 85 DSEQTEAGLAATNTDPLKTISDDVRDAFGDLIKSNQMTVRGNELWIEIELNSSLLFGSGD 144
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYL 141
K +++ +A IL F + + ++ TD++ N +S RA I L
Sbjct: 145 AMPSDKAFAIIEKVADILKPFAN-PVHVEGFTDNLPIRTAQYPTNWELSSARAASIVRLL 203
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
GV+ R SV G+ P+ +NDT GR N+R+ + I +++
Sbjct: 204 AMEGVNPARMASV-GYGEYQPVASNDTADGRARNRRVVLVISRNLEVRR 251
>gi|269792934|ref|YP_003317838.1| OmpA/MotB domain-containing protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100569|gb|ACZ19556.1| OmpA/MotB domain protein [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 241
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 68/189 (35%), Gaps = 14/189 (7%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV----VS 66
+ + G + D KR + + Q ++ G+ V
Sbjct: 56 ALGVLPGGKTIQEDAGVYQGKVGQDAGDSIKRTQEFKEGIARQLQALAKEEGLQSQMKVH 115
Query: 67 RIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGT- 122
+T + F L +L + +L +FP ++ + HTD+
Sbjct: 116 VDQRGVTVSMSEQFLFAPGSAELSPFARRVLFKVGQVLRVVRFP---LSFEGHTDNTPME 172
Query: 123 ---LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+N +S RA + SY++ R S++ + G+ P+ NDT R N+R++
Sbjct: 173 GGLYGDNWGLSAARAAAVASYMVNRIGLSDKNVQAVGYGPSKPLVPNDTPEHRAINRRVD 232
Query: 180 IQIFPRGNI 188
I I +I
Sbjct: 233 IVILTEHSI 241
>gi|312892040|ref|ZP_07751540.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311295412|gb|EFQ72581.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 460
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 2/168 (1%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
++ + N G +D A + ++
Sbjct: 294 LAATNAKLTQDSDGDGVPDLFDKCPNTPSGVKVDGAGCPLPKAENVKVYITEEDKRVVKD 353
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I + + + LP L +A +L + + + HTD+ G+ N+ +S+ERA
Sbjct: 354 AIANLEFDLGKATIRAHSLPSLDKVAELLV-NKNFSLKLAGHTDNSGSAALNMRLSKERA 412
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ IK+YL+ +G +++R I G+ PI +N T GRQ N+R+E +
Sbjct: 413 EAIKTYLVSKGANASR-IEATGYGMNQPIASNKTAAGRQQNRRVEFTL 459
>gi|254785076|ref|YP_003072504.1| outer membrane protein and related peptidoglycan-associated
[Teredinibacter turnerae T7901]
gi|237687207|gb|ACR14471.1| putative outer membrane protein and related
peptidoglycan-associated [Teredinibacter turnerae T7901]
Length = 472
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+V GD + + + +LQ + + +P + ++ HTDS
Sbjct: 345 DEAMVLSQGDNVLIRMVGLNFDPGSAQVNASNYALLQKVEQAVRMYPGYTVVVEGHTDSF 404
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVS-SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N +S++RA+ ++ YL+ + I G+ PI N+T+ GR+ N+RI+
Sbjct: 405 GSTQANQTLSEDRANAVRQYLLVNMNDLAAGAIEAYGYGESQPIANNETREGRKRNRRID 464
Query: 180 IQI 182
+ +
Sbjct: 465 VLL 467
>gi|121594804|ref|YP_986700.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42]
gi|222110597|ref|YP_002552861.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY]
gi|120606884|gb|ABM42624.1| OmpA/MotB domain protein [Acidovorax sp. JS42]
gi|221730041|gb|ACM32861.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY]
Length = 218
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + L + + + VI HTDSIGT N +S RA+ +
Sbjct: 109 DAFFDFDKSVLKPEGKAKLDDLVSKVKGINLEVIIAVGHTDSIGTDAYNQKLSVRRAEAV 168
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + + G K P+ N TK GR N+R+EI++
Sbjct: 169 KAYLVSK-GIEKNRVYTEGKGEKQPVADNKTKEGRAKNRRVEIEVV 213
>gi|310644267|ref|YP_003949026.1| ompa/motb domain protein [Paenibacillus polymyxa SC2]
gi|309249218|gb|ADO58785.1| OmpA/MotB domain protein [Paenibacillus polymyxa SC2]
Length = 271
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 65/187 (34%), Gaps = 21/187 (11%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-----------DTGIVVSR 67
K+ +K + K E E Q + I VS
Sbjct: 83 SKNPPATKQPASNKKEAGSTKLTEREQAFRKQEKELQNLMGVIQEYITDNKLQNQIFVSD 142
Query: 68 IGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT---- 122
I + F L++ L +A++ T I+I+ HTD+I
Sbjct: 143 QPRGIVITLNDRFLFDQGRAALKQGSANTLSKLASLFRDLK-TPISIEGHTDNIPFTRSS 201
Query: 123 ----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
K+N +S RA + + I R S G+A P+ N T+ GRQ N+R+
Sbjct: 202 NSSTYKDNWELSGARALSVLRFFIDREQLSPSGFQYAGYADTRPVGDNSTEAGRQKNRRV 261
Query: 179 EIQIFPR 185
EI + +
Sbjct: 262 EITVLRQ 268
>gi|257485486|ref|ZP_05639527.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|331010666|gb|EGH90722.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 271
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + + + + + L+ + + L
Sbjct: 126 ASAQQQGRWLEDQILS--LATTETDRGLVMTLGDVLFDAGRAELKSSASRTILKVVQFLQ 183
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P V+ I+ +TDS G + NL +S++RA + ++ + I V G+ ++P++
Sbjct: 184 INPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVAD-VLMDLGVDEKRIHVEGYGQQFPVN 242
Query: 165 TNDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 243 ANASERGRAQNRRVEIV 259
>gi|254974362|ref|ZP_05270834.1| putative chemotaxis protein [Clostridium difficile QCD-66c26]
gi|255091756|ref|ZP_05321234.1| putative chemotaxis protein [Clostridium difficile CIP 107932]
gi|255313486|ref|ZP_05355069.1| putative chemotaxis protein [Clostridium difficile QCD-76w55]
gi|255516174|ref|ZP_05383850.1| putative chemotaxis protein [Clostridium difficile QCD-97b34]
gi|255649270|ref|ZP_05396172.1| putative chemotaxis protein [Clostridium difficile QCD-37x79]
gi|306519371|ref|ZP_07405718.1| putative chemotaxis protein [Clostridium difficile QCD-32g58]
Length = 246
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 56/141 (39%), Gaps = 6/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
++ + + + + + + F + ++ + I +LN+
Sbjct: 93 EEIQKYLNENGMANSVSLRVQDRGLVISLKDTILFDTGKAVVKDNSRDKIIQIGKMLNEM 152
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
S + ++ HTD++ K+N +S RA + LI + +S G+ P
Sbjct: 153 NSY-MRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDKLSAVGYGEFRP 211
Query: 163 IDTNDTKVGRQNNQRIEIQIF 183
I N ++ GR N+R++I +
Sbjct: 212 IAENSSEEGRSKNRRVDIVLV 232
>gi|152976910|ref|YP_001376427.1| flagellar motor protein MotB [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152025662|gb|ABS23432.1| OmpA/MotB domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 265
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 10/169 (5%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQD----TGIVVSRIGDMITCYIPVHVSFV-SE 85
V +R + L + +++ + + I +V F +
Sbjct: 97 ATEKAEAEVKQREMNELKAVQKSIDQYIEERQLSSSFKTKLTEQGLMITILENVLFDSGK 156
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYL 141
++ + L + ++ +L I + HTD++ +N +S +RA L
Sbjct: 157 ADVKPESLNIANEMSHLLLSAAPREITVSGHTDNVPITNSQFSSNWELSTQRAVNFMQVL 216
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP-RGNIK 189
+Q S G+ P +NDT G+ N+R+E+ I P +G IK
Sbjct: 217 LQNKQLDPAKFSATGYGEYRPATSNDTSEGKAKNRRVEVFILPLQGTIK 265
>gi|146329268|ref|YP_001210055.1| OmpA domain-containing protein [Dichelobacter nodosus VCS1703A]
gi|146232738|gb|ABQ13716.1| OmpA domain protein [Dichelobacter nodosus VCS1703A]
Length = 194
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 68/194 (35%), Gaps = 14/194 (7%)
Query: 1 MIKELGLSMFIMTTI--SGCGLA-SREKKKVFLHKSNDTDIVNKRFGSSLD--------- 48
M + + + ++ + SGC + + + + TD G
Sbjct: 1 MKYKGLVGVLVIFVLCLSGCSKPYNMAQTETGENAYGSTDATYSSAGYDSPYGTGGYGNH 60
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
A QD V+ +G + + F L+ + + ++ A L P
Sbjct: 61 NARASVGDFYQDPSYGVNVVGGPTSEAKDRVIYFSYDSAQLDSRSIAVITEHARYLRDHP 120
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
T + ++ HTD G+ + N+ + + RA +K ++ + + V + + P
Sbjct: 121 DTRVVLEGHTDERGSREYNIGLGERRAYSVKRIF-EQQGVAQTQMRVLSYGEERPALWCS 179
Query: 168 TKVGRQNNQRIEIQ 181
+ N+R+ I
Sbjct: 180 NESCYARNRRVVII 193
>gi|104783066|ref|YP_609564.1| peptidoglycan-associated lipoprotein [Pseudomonas entomophila L48]
gi|95112053|emb|CAK16780.1| peptidoglycan-associated lipoprotein precursor [Pseudomonas
entomophila L48]
Length = 165
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 55/165 (33%), Gaps = 21/165 (12%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + N N E + I
Sbjct: 21 GCSSKGGDNAGEGAVDPNAGYGANTGAVDGSLSEEAALRA-------------------I 61
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + + ++ +TD GT + N+ + + RA
Sbjct: 62 TTFYFEYDSSDLKPEAMRSLDVHAKDLKSNGN-RVVLEGNTDERGTREYNMALGERRAKA 120
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+ + S + + + + P+ T + + N+R+E++
Sbjct: 121 VQRYLVLQ-GVSPAQLELVSYGEERPVATGNDEQSWAQNRRVELR 164
>gi|317505336|ref|ZP_07963264.1| OmpA family protein [Prevotella salivae DSM 15606]
gi|315663550|gb|EFV03289.1| OmpA family protein [Prevotella salivae DSM 15606]
Length = 284
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + ++ + ++ + + + L IA I+ + + I+ +TD++
Sbjct: 136 VDVRVLKGVVYISLADNMLYRSGSYEINDRAEETLGKIAKIIMDYKDYDVLIEGNTDNVP 195
Query: 122 TL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+NN +S RA + YL S + ++ G P+ TNDT++G+
Sbjct: 196 VNTKSAAMKNIRNNWDLSALRASSVVQYLQDHFGVSPKRLTAGGRGEYNPVATNDTELGK 255
Query: 173 QNNQRIEIQIFPR 185
Q N+R +I I P+
Sbjct: 256 QRNRRTQIIITPK 268
>gi|299145102|ref|ZP_07038170.1| putative flagellar motor protein MotB [Bacteroides sp. 3_1_23]
gi|298515593|gb|EFI39474.1| putative flagellar motor protein MotB [Bacteroides sp. 3_1_23]
Length = 280
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 59/152 (38%), Gaps = 4/152 (2%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
N + + L +D D V + G + + L+K+ L
Sbjct: 114 AQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALG 173
Query: 98 LIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+A +LNK + I+ HTD+ K+N +S RA + LI+ + I
Sbjct: 174 KLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQ 233
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+D N T GR N+R EI + P+
Sbjct: 234 PSGRGEYMPVDDNKTAEGRSKNRRTEIIMAPK 265
>gi|157146633|ref|YP_001453952.1| peptidoglycan-associated outer membrane lipoprotein [Citrobacter
koseri ATCC BAA-895]
gi|157083838|gb|ABV13516.1| hypothetical protein CKO_02399 [Citrobacter koseri ATCC BAA-895]
Length = 172
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 59/181 (32%), Gaps = 15/181 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C ++ ++ E Q
Sbjct: 6 VLKGLMIALPVM-AIAACSSNKNASNDGSEGMLGAGTGMDANGSGNMSSEEQARLQMQQL 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + F ML A L PS + ++ H D
Sbjct: 65 QQNNI-------------VYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 111
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 112 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 170
Query: 181 Q 181
Sbjct: 171 V 171
>gi|149202853|ref|ZP_01879824.1| peptidoglycan-associated lipoprotein [Roseovarius sp. TM1035]
gi|149143399|gb|EDM31435.1| peptidoglycan-associated lipoprotein [Roseovarius sp. TM1035]
Length = 172
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 56/172 (32%), Gaps = 17/172 (9%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L + ++ C +R + +N + GS+ D + Q +
Sbjct: 7 TLILCAGLALAACTNPNRFDDGSAVDLNNGANSGAGFAGSAQDPTSPAYFQQTVGDRV-- 64
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ V + L L A L I+ H D GT +
Sbjct: 65 --------------LFAVDQSTLGSDAQATLDGQANWLTTNRDFTAVIEGHADEQGTREY 110
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + RA+ ++ YLI R S + V + + PI+ + N+R
Sbjct: 111 NLALGARRANAVQEYLIGR-GVSPNRLRVVSYGKERPIEICSNEACYAKNRR 161
>gi|331641242|ref|ZP_08342377.1| peptidoglycan-associated lipoprotein [Escherichia coli H736]
gi|331651749|ref|ZP_08352768.1| peptidoglycan-associated lipoprotein [Escherichia coli M718]
gi|331672263|ref|ZP_08373054.1| peptidoglycan-associated lipoprotein [Escherichia coli TA280]
gi|331676423|ref|ZP_08377120.1| peptidoglycan-associated lipoprotein [Escherichia coli H591]
gi|332282410|ref|ZP_08394823.1| peptidoglycan-associated outer membrane lipoprotein [Shigella sp.
D9]
gi|331038040|gb|EGI10260.1| peptidoglycan-associated lipoprotein [Escherichia coli H736]
gi|331050027|gb|EGI22085.1| peptidoglycan-associated lipoprotein [Escherichia coli M718]
gi|331070458|gb|EGI41822.1| peptidoglycan-associated lipoprotein [Escherichia coli TA280]
gi|331075916|gb|EGI47213.1| peptidoglycan-associated lipoprotein [Escherichia coli H591]
gi|332104762|gb|EGJ08108.1| peptidoglycan-associated outer membrane lipoprotein [Shigella sp.
D9]
Length = 181
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C ++ G + + Q
Sbjct: 14 VLKGLMIALPVM-AIAACSSNKNASNDGSE------GMLGAGTGMDANGGNGNMSSEEQA 66
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + I + + + F ML A L PS + ++ H D
Sbjct: 67 RLQMQQLQQNNIV------YFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER 120
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 121 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVL 179
Query: 181 Q 181
Sbjct: 180 V 180
>gi|162454125|ref|YP_001616492.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161164707|emb|CAN96012.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 274
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLK 124
+ G+ V S+ + L+ + + + P T + I+ HTD+ + +
Sbjct: 61 EQGGESQVYIEGKIVFDTSKATIRPGSEKTLETLLQFIKEHPEVTRLRIEGHTDAQSSEE 120
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S RA + +L+ V+S+R I+V GF P+ N+ GR N+R+E +
Sbjct: 121 HNQALSARRALAVADWLVDHEVASDRLIAV-GFGESRPLGPNEIAAGRSENRRVEFHV 177
>gi|317012903|gb|ADU83511.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
Lithuania75]
Length = 179
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 61/184 (33%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + + +GC K + + +K E + +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCTQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|294789485|ref|ZP_06754721.1| outer membrane porin F [Simonsiella muelleri ATCC 29453]
gi|294482565|gb|EFG30256.1| outer membrane porin F [Simonsiella muelleri ATCC 29453]
Length = 307
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 49/100 (49%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + F++ ++ ++ +A + +FP+T + ++ HTDS + + N+ +SQ R + ++
Sbjct: 195 VLFDTDKSFVKSQYYSEIEQVAEYMKRFPNTSVTLEGHTDSRASDEYNIGLSQRRMNAVR 254
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
LI+R + G+ P N T N+R+
Sbjct: 255 DILIRRYGIDGARVHAVGYGESRPAYPNTTPENMHQNRRV 294
>gi|329944219|ref|ZP_08292478.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328530949|gb|EGF57805.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 464
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 2/128 (1%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFP-STVIAIQSH 116
D + T + V+F L + +L + + K+P + I H
Sbjct: 160 ADGSSDTKKNEKSTTVTVDGDVTFEVDSDQLSAQADAVLANVVEQIKKYPSGGDLTITGH 219
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD + +N +S+ RA + S L + S SV G P ND+ RQ N+
Sbjct: 220 TDDVADDAHNQDLSERRAKAVSSRLKKLTDLSTWNESVSGKGESSPRVPNDSDEHRQANR 279
Query: 177 RIEIQIFP 184
R+EI + P
Sbjct: 280 RVEITLTP 287
>gi|300940943|ref|ZP_07155467.1| OmpA family protein [Escherichia coli MS 21-1]
gi|300454267|gb|EFK17760.1| OmpA family protein [Escherichia coli MS 21-1]
Length = 160
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N ++S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEVLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|299768758|ref|YP_003730784.1| Outer membrane protein A precursor [Acinetobacter sp. DR1]
gi|298698846|gb|ADI89411.1| Outer membrane protein A precursor [Acinetobacter sp. DR1]
Length = 159
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 28/181 (15%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+L + T++GC + L+ G
Sbjct: 7 KLSFIALLCITLAGCLS--------------------------FGPLKYRQVKLLKKEGF 40
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V++ G + + + L++ L +A LNK+ + I HTD +G
Sbjct: 41 VLTDEGWTLGLP-ERLLFDFNNAELKQSHEAELVRLANQLNKYDLNKLKIVGHTDDVGDA 99
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S+ERA + + + R I V G P N T R N+R+ I +
Sbjct: 100 AYNQKLSEERAQSVANLFLAR-GFKKENIYVIGRGSTQPYVPNTTNENRAINRRVAIVVI 158
Query: 184 P 184
P
Sbjct: 159 P 159
>gi|229593379|ref|YP_002875498.1| hypothetical protein PFLU6014 [Pseudomonas fluorescens SBW25]
gi|229365245|emb|CAY53556.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 429
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFP 107
+ ++ + V D I F S + + P++ IA + K
Sbjct: 287 RLAGFLVEDIKAGRVAVEDAVDRSVVTIRGDELFASASSSIVDDYQPLMLRIADAIRKVK 346
Query: 108 STVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + H+D+ +N +S+ RA + L + ++R S G + P+
Sbjct: 347 G-QVRVTGHSDNRPIATLRFPSNWALSEARAKSVLDILAAKTGQADR-FSAEGRSDTEPV 404
Query: 164 DTNDTKVGRQNNQRIEIQIFPRG 186
TN T GR N+R+EI + G
Sbjct: 405 ATNATAEGRARNRRVEITVLAEG 427
>gi|83943919|ref|ZP_00956376.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. EE-36]
gi|83954492|ref|ZP_00963203.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. NAS-14.1]
gi|83840776|gb|EAP79947.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. NAS-14.1]
gi|83845166|gb|EAP83046.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. EE-36]
Length = 174
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 67/180 (37%), Gaps = 20/180 (11%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRF--GSSLDKAEDEFQMQ 57
M + L ++ +S C R + + + +N GS+ D A + Q
Sbjct: 1 MNRILTATLLIAALAVSACTNPDRFGADGMNNGAANGAGLNGGIIPGSANDPASTAYFQQ 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V + L + L A LN I+ H
Sbjct: 61 AVGDRV----------------LFLVDQSNLTPEGQATLDGQAAWLNTNTDYQAVIEGHA 104
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + RA+ + YLI RG++++R + V + + PI+ ++ N+R
Sbjct: 105 DEQGTREYNLALGARRANAAREYLISRGIAASR-LRVVSYGKERPIEVCSSEACYAKNRR 163
>gi|313674920|ref|YP_004052916.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312941618|gb|ADR20808.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 639
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ L L + L +P + I HTDS G N +SQER
Sbjct: 524 IRFKSIEFEENSAKLRPDMYSDLDKVVDFLLDYPEFKLKISGHTDSSGDELRNKSLSQER 583
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-TKVGRQNNQRIEIQI 182
AD I+ Y+I + G+ P+ + T R+ N+R+E +I
Sbjct: 584 ADAIRDYIIILHPIEEERVVAEGYGNSQPVVEEEITDDDRRLNRRVEFEI 633
>gi|262199850|ref|YP_003271059.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262083197|gb|ACY19166.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 266
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 60/170 (35%), Gaps = 6/170 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + L + + + + D FQ + + V + +P
Sbjct: 84 TDDMQATEQELLELRAQQQKAEERLKAFRQLYDRFQALVDTGKLQVDFRNGQMVLKLPSE 143
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERA 134
V F L K L + IL +F + HTD G K+N +S RA
Sbjct: 144 VLFPSGRAKLSDKGQEALSEVLNILMEFKDRRFLVAGHTDAVKIRGGRFKDNWDLSTARA 203
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ Y+++ + G+ P+ NDT R N+RIEI + P
Sbjct: 204 VSVVDYMVEA-GFDPNNLGAAGYGEFDPVAPNDTAENRALNRRIEIILVP 252
>gi|237803483|ref|ZP_04591068.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331025465|gb|EGI05521.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 271
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + ++ + + + L+ + + L
Sbjct: 126 ASAQQQGRWLEDQILS--LATTQTDRGLVMTLGDVLFDAGHAELKNSASRTILKVVQFLQ 183
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P V+ I+ +TDS G + NL +S++RA + LI GV R I V G+ ++P+D
Sbjct: 184 INPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLIDLGVDEKR-IQVEGYGQQFPVD 242
Query: 165 TNDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 243 ANTSERGRAQNRRVEIV 259
>gi|153872253|ref|ZP_02001198.1| outer membrane protein OprF [Beggiatoa sp. PS]
gi|152071282|gb|EDN68803.1| outer membrane protein OprF [Beggiatoa sp. PS]
Length = 175
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 68/183 (37%), Gaps = 10/183 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ LS+ + + + + K + + + +
Sbjct: 1 MNNTTLSILFASLLI------LFGNIAYADEVLFPTTAAKIIEALQPTLQSKGLGSSKGL 54
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTDSI 120
G VV+ + I ++ +L+ A L S + I HTDS
Sbjct: 55 GDVVTDAPPKVAALI---YFDTDCPAIKANSYTLLREYAEALKTGLASVKLEIGGHTDSS 111
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G NL +S++RA +K +L+ + + V+G+ PI +N T+ G+ N+R+E
Sbjct: 112 GPAYYNLTLSKKRAQAVKDFLVFAYAVEDNRLIVKGYGETQPIASNRTRDGQAKNRRVEF 171
Query: 181 QIF 183
++
Sbjct: 172 KVI 174
>gi|315921071|ref|ZP_07917311.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313694946|gb|EFS31781.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 280
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 4/152 (2%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
N + + L +D D V + G + + L+K+ L
Sbjct: 114 AQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALG 173
Query: 98 LIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+A +LNK + I+ HTD+ K+N +S RA + LI+ + I
Sbjct: 174 KLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQ 233
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+D N+T GR N+R EI + P+
Sbjct: 234 PSGRGEYMPVDDNETAEGRSKNRRTEIIMAPK 265
>gi|167589254|ref|ZP_02381642.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu]
Length = 246
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV------------SFVSEVFLEKKFLPM 95
+ + + +T I + + L + +
Sbjct: 99 EAQRQQLASDMANTLNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGKVV 158
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +A L+K P+ + + HTD+ G +N+ +SQ RAD +K YLI + +++ ++
Sbjct: 159 LDQMAAALSKMPNRTVDLIGHTDNSGNRASNIALSQARADAVKGYLITK-GIASQQMTTT 217
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G PI NDT GR N+RI+ ++
Sbjct: 218 GVGPDQPIAPNDTAEGRARNRRIDFRV 244
>gi|115375674|ref|ZP_01462929.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310821151|ref|YP_003953509.1| OmpA-like Outer membrane domain-containing protein [Stigmatella
aurantiaca DW4/3-1]
gi|115367322|gb|EAU66302.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309394223|gb|ADO71682.1| OmpA-like Outer membrane domain protein [Stigmatella aurantiaca
DW4/3-1]
Length = 380
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V D + ++ LE+ P+L L P + I+ H+DS G
Sbjct: 253 KVVVNRDKLVLK-EKLYFAWNQSTLEEASFPVLDEAVQALKDNPDFRVQIEGHSDSSGAD 311
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ-- 181
NN +S++RA + YL+ G++ R +S +GF+ P+DTN+T GR+NN+R+E
Sbjct: 312 DNNQTLSEKRAKTVLDYLVAHGIAKERLVS-KGFSSSVPLDTNNTVAGRENNRRVEFVVN 370
Query: 182 --IFPRGNIK 189
I G+ K
Sbjct: 371 FNILNDGSTK 380
>gi|206558755|ref|YP_002229515.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
gi|198034792|emb|CAR50659.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
Length = 316
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 10/161 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLD---KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ K +H + ++L+ ++ ++ + G++ + +
Sbjct: 161 EMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTIE------F 214
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL
Sbjct: 215 ETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYL 274
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I + + ++ G PI NDT GR N+RIE ++
Sbjct: 275 ITKS-IPPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRV 314
>gi|167583014|ref|ZP_02375888.1| OmpA domain protein [Burkholderia thailandensis TXDOH]
Length = 324
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 164 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 223
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K P+ + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 224 TGSATLTPQGRTILDQMAGALAKMPNRTVEIIGHTDNSGNRASNIALSQSRADAVKGYLV 283
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI +ND+ GR N+RIE +
Sbjct: 284 TK-GIASQQLTTTGVGPDQPIASNDSADGRARNRRIEFR 321
>gi|108757927|ref|YP_633347.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108461807|gb|ABF86992.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 476
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 66/167 (39%), Gaps = 8/167 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV----VSRIGDMITCYIP 77
E D D LD +E +Q + V D I
Sbjct: 310 PNEAGPTENGGCPDKDTDGDGIVDRLDACPEEPGVQEERGCAKQYKMVVIKRDRIEIK-K 368
Query: 78 VHVSFVSEVFL-EKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERAD 135
+ + K+ +L +A L P I I+ HTDS+G +NL +SQ RAD
Sbjct: 369 QILFSSGSHKIYGKQSTAVLDDVAQALRDAPWIKRIRIEGHTDSMGNDASNLRLSQRRAD 428
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + L++RG+ R I GF PI N TK GR N+R E ++
Sbjct: 429 AVMAQLLRRGIDPGR-IQAVGFGETQPIAPNSTKTGRAMNRRTEFKV 474
>gi|313497484|gb|ADR58850.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 239
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L LQ + LN + + HTDS+G+ N +S+ RA +
Sbjct: 136 VMFAFDSAELTPAAQQRLQGLVAKLNSPTVAKVRVIGHTDSVGSDSYNQALSERRASSVA 195
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YLI + ++ +G P+ N+T+ GR N+R+E+ +
Sbjct: 196 EYLIGQ-GLEMGKVTSQGRGESEPVTDNETEEGRARNRRVELHL 238
>gi|308184866|ref|YP_003928999.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
SJM180]
gi|308060786|gb|ADO02682.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
SJM180]
Length = 179
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 61/184 (33%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + + +GC K + + +K E + +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCTQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|258647767|ref|ZP_05735236.1| OmpA family protein [Prevotella tannerae ATCC 51259]
gi|260852625|gb|EEX72494.1| OmpA family protein [Prevotella tannerae ATCC 51259]
Length = 288
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + ++ + ++ + + + L IA I+ + + ++ +TD +
Sbjct: 143 VDVKVLKGVVYISLADNMLYKSGSYEINSRAKETLSKIAKIIKDYRDYDVLVEGNTDPVP 202
Query: 122 TLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NN +S RA + L + ++ G P+ TN+T+VG+Q N+R
Sbjct: 203 ITRTNIRNNWDLSCLRASSVVLALQNDYGVNPARLTAAGRGEYNPVTTNETEVGKQRNRR 262
Query: 178 IEIQIFPR 185
+I I P+
Sbjct: 263 TQIIITPK 270
>gi|150019084|ref|YP_001311338.1| OmpA/MotB domain-containing protein [Clostridium beijerinckii NCIMB
8052]
gi|149905549|gb|ABR36382.1| OmpA/MotB domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 251
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 68/178 (38%), Gaps = 10/178 (5%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD----TGIVVSRIGD 70
+ S V ++D D + L + + + + ++ S
Sbjct: 63 VIAVADNSNSVPDVIESTNSDADEDSNAEREKLSDVKKKVDELVNNSELKGSVITSIQER 122
Query: 71 MITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKN 125
+ V F + ++ + L I+ ILN + I ++ HTD+ +
Sbjct: 123 GLIISFNDSVFFNSGQAAIKPDWQNKLISISKILNGIDNY-IRVEGHTDNVVINTDYFHS 181
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S RA + +LI +G +S G+ P+ +N T+ G+ N+R++I I
Sbjct: 182 NWQLSAVRASNVVEFLIYQGNVKPERLSSVGYGEYRPVKSNTTEEGKAANRRVDIVIL 239
>gi|260909380|ref|ZP_05916088.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295]
gi|260636472|gb|EEX54454.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295]
Length = 280
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +L++ + V + ++ + ++ + + + L IA I+ + + +
Sbjct: 131 REELKE--VDVRVLKGVVYISLADNMLYKSGSYEINDRAAETLSKIAKIIMDYQDYDVLV 188
Query: 114 QSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ +TD++ + NN +S RA + YL R + + ++ G P+ TN T+
Sbjct: 189 EGNTDNVPINRENIRNNWDLSCLRASSVVQYLQTRYGVNPKRLTAGGRGEFNPVATNGTE 248
Query: 170 VGRQNNQRIEIQIFPR 185
VG+Q N+R +I I P+
Sbjct: 249 VGKQRNRRTQIIITPK 264
>gi|157371239|ref|YP_001479228.1| hypothetical protein Spro_2999 [Serratia proteamaculans 568]
gi|157323003|gb|ABV42100.1| OmpA/MotB domain protein [Serratia proteamaculans 568]
Length = 406
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 7/139 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPS 108
+ + ++ + +VV + F S + ++P++ IA +N
Sbjct: 251 LKSFLRKEIAEGLVVVRDEAQQSVVILKGDGLFDSAATTVRGNYIPVIDRIAAAMNGVSG 310
Query: 109 TVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I + ++D++ +N +S RAD + + +Q+ + + + + G P+
Sbjct: 311 -KILVTGYSDNLPIRSARFASNWELSLARADAVSAQ-LQKHLDNPQRVKAEGRGESNPVA 368
Query: 165 TNDTKVGRQNNQRIEIQIF 183
N++KV R N+R+EI +
Sbjct: 369 PNNSKVNRALNRRVEITLL 387
>gi|77460622|ref|YP_350129.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77384625|gb|ABA76138.1| putative OmpA family lipoprotein [Pseudomonas fluorescens Pf0-1]
Length = 165
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 21/165 (12%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + N N E + I
Sbjct: 21 GCSSKGGDNAGEGAVDPNAGYGANTGAVDGSLSEEAALRA-------------------I 61
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + ++ +TD GT + N+ + + RA
Sbjct: 62 TTFYFEYDSSDLKPEAMRALDVHAKDLKAN-GARVVLEGNTDERGTREYNMALGERRAKA 120
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+ + S + + + + P+ T + + N+R+E++
Sbjct: 121 VQRYLVLQ-GVSPAQLELVSYGEERPVATGNDEQSWAQNRRVELR 164
>gi|116695082|ref|YP_840658.1| OmpA/MotB-family outer membrane protein [Ralstonia eutropha H16]
gi|113529581|emb|CAJ95928.1| outer membrane protein, OmpA/MotB-family [Ralstonia eutropha H16]
Length = 435
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + + ++ + V T + + K P L +A +NK
Sbjct: 297 RLAELLKDEIARGVVAVRDDNHRSTVVFRGDDMFGAGRAEVNAKLTPTLNKVAGEINKLQ 356
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + H+D+ +N ++S+ERA ++ YL + + R + G P+
Sbjct: 357 G-KVQVIGHSDNQPIKSARYPSNQVLSEERAAMVSEYLASQ-GVAKRRLEAIGKGDTEPL 414
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
N T R N+R+E+ +
Sbjct: 415 TDNKTPAARAANRRVEVVVT 434
>gi|78065049|ref|YP_367818.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77965794|gb|ABB07174.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 320
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 10/161 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLD---KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ K +H + ++L+ ++ ++ + G++ + +
Sbjct: 165 EMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTIE------F 218
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL
Sbjct: 219 ETGSATLTPQGRLILDQMAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYL 278
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I + + ++ G PI NDT GR N+RIE ++
Sbjct: 279 ITKS-ILPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRV 318
>gi|229090688|ref|ZP_04221921.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42]
gi|228692630|gb|EEL46356.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42]
Length = 126
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 51/123 (41%), Gaps = 6/123 (4%)
Query: 65 VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V R + + + + ++ + ++ + P+ I ++ HTDS
Sbjct: 3 VYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPN-PIVVEGHTDSRPIH 61
Query: 124 KN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ N +S RA + +LI+ ++ ++ G+A P+ ND+ + N+R+
Sbjct: 62 NDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNRRVV 121
Query: 180 IQI 182
I I
Sbjct: 122 IYI 124
>gi|322432961|ref|YP_004210210.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
gi|321165188|gb|ADW70892.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
Length = 239
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 67/178 (37%), Gaps = 8/178 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQDTGIVVSRIGDMITCYIPV 78
A L + + + L + + + IV+ + D +
Sbjct: 61 TAPETPVPDQLRGPTQSADPLRFDTAKLSQQLQGVLGDAIDKHEIVMQQTADGFIISLRE 120
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQER 133
F E L LQ A +L + + ++ H+D G ++N +S R
Sbjct: 121 LGFFNSGEATLLPGAAAKLQDTAKVLMED-GLEVRVEGHSDDQPIHNGQFQSNWELSTAR 179
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-PRGNIKK 190
A + S L+ ISV G+ +P+ N T GR++N+R+++ + PR +K
Sbjct: 180 AMSVLSLLVDEAGFPPTKISVAGYGPYHPVADNATLDGRRSNRRVDLVVLSPRSREEK 237
>gi|114049133|ref|YP_739683.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113890575|gb|ABI44626.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 185
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 66/164 (40%), Gaps = 3/164 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP---VH 79
R+ + + ++ + G + +A + + G G +
Sbjct: 2 RDTVNIEEMTTTQAYDLSDKDGDGVIEARERCNDTAKGAGTDNYGCGKIKAINERKEINV 61
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ ++ ++ P ++ IA L ++P+T + I+ HT GT + N ++SQERAD + +
Sbjct: 62 LFPNDSAYIAPEYYPQIEEIAMFLRQYPTTKVTIEGHTSRTGTDERNAVLSQERADAVTA 121
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L R ++ G+ P+ T N+R+ ++
Sbjct: 122 VLADRFSIDRSRLTAIGYGSSRPLVLEHTPDAETRNRRVVAEVT 165
>gi|332879337|ref|ZP_08447034.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332682757|gb|EGJ55657.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 422
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
++ D + C I + ++ + L +A L + I ++
Sbjct: 296 EEINDMMQKGEPVAGKTICAIDAINFDFGKSTIKTESYAYLNRLANTLVRT-HARIEVKG 354
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD++GT + N+ +S +RA + YLI R +S + P+ TNDT+ GR N
Sbjct: 355 HTDNVGTEEFNMKLSHKRAQAVVDYLIGR-GVDKDKLSYSYYGMSKPLTTNDTEEGRTMN 413
Query: 176 QRIEIQIF 183
+R+E +I
Sbjct: 414 RRVEFEIL 421
>gi|313674153|ref|YP_004052149.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312940851|gb|ADR20041.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 485
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 16/176 (9%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLD---KAEDEFQMQLQDTGIVVSRIGDMITCYI-- 76
+++ + + ++ V + +D + E Q L G + G +
Sbjct: 310 AKQPLQDEPTTAMESQPVAVKIDQEMDYVKEQERNNQGFLAQIGEKIGLGGKDEEIKLID 369
Query: 77 ---------PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
L+ KF +L I+ L K P I ++ HTD+IG N+
Sbjct: 370 AGAKGQKINRNVYFKFDSDKLQGKFNSLLDKISEELEKNPQIKIMLEGHTDAIGGEDINI 429
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK-VGRQNNQRIEIQI 182
+S RA+ +K LI R + I + + PI TND + GR+ N+R+E +
Sbjct: 430 DLSCSRANKVKDALIDR-GINQYRIEISCEGKERPIATNDDEFEGRELNRRVEFYL 484
>gi|262281579|ref|ZP_06059357.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202]
gi|262256955|gb|EEY75695.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202]
Length = 159
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 62/181 (34%), Gaps = 28/181 (15%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+L + T++GC + L+ G
Sbjct: 7 KLSFIALLCITLAGCLS--------------------------FGTLKYRQVKLLKKEGF 40
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V++ G + + + L++ L +A+ LNK+ + I HTD +G
Sbjct: 41 VLTNEGWTLGLP-ERLLFDFNNAELKQSHEAELVRLASQLNKYDLNKLKIVGHTDDVGDA 99
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S+ERA + + + R I V G P N T R N+R+ I +
Sbjct: 100 AYNQKLSEERAQSVANLFLAR-GFKQENIYVIGRGSTQPYVPNTTNENRAINRRVAIVVI 158
Query: 184 P 184
P
Sbjct: 159 P 159
>gi|260172785|ref|ZP_05759197.1| putative flagellar motor protein MotB [Bacteroides sp. D2]
Length = 256
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 4/152 (2%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
N + + L +D D V + G + + L+K+ L
Sbjct: 90 AQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALG 149
Query: 98 LIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+A +LNK + I+ HTD+ K+N +S RA + LI+ + I
Sbjct: 150 KLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQ 209
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+D N+T GR N+R EI + P+
Sbjct: 210 PSGRGEYMPVDDNETAEGRSKNRRTEIIMAPK 241
>gi|255263976|ref|ZP_05343318.1| OmpA family protein [Thalassiobium sp. R2A62]
gi|255106311|gb|EET48985.1| OmpA family protein [Thalassiobium sp. R2A62]
Length = 189
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 65/180 (36%), Gaps = 10/180 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS----LDKAEDEFQMQLQDT 61
G+++ ++ ++ A ++++ L + I G D AE ++
Sbjct: 13 GVAVAVLGLLASTDAAEAQQQRTILGERYTPTIWVDPDGCEHWVMDDGAEGYMTPNVRRD 72
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G V R G++ + + L ++ + HTDS
Sbjct: 73 GTPVCRRGNVCGVMQSDQLFQTDSYHINNAGKQAL---MNFFRSSGASAYIVTGHTDSRA 129
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ +SQ RA+ + R + VRG+ + P N + G N+R+EI
Sbjct: 130 SDAYNMRLSQNRANSVARVGQS---VGARIVDVRGYGERQPRADNHSHQGMAQNRRVEII 186
>gi|192361715|ref|YP_001982600.1| hypothetical protein CJA_2135 [Cellvibrio japonicus Ueda107]
gi|190687880|gb|ACE85558.1| hypothetical protein CJA_2135 [Cellvibrio japonicus Ueda107]
Length = 294
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 7/169 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S + K + + D ++F + + I VS + + +
Sbjct: 102 SDQAPKDTTPQLEKPVKTSDELAQISDLVTEKFSQLIDEQLIQVSSNELWLQIELKDSIL 161
Query: 82 F-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADV 136
F + + + I+ IL + + I ++ TD++ N +S RA
Sbjct: 162 FASGNADPSAQAMVIFDEISRILKNYSN-PIQVEGFTDNVPINSARYPTNWELSSARASA 220
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
I L + + ++ G+ P+ +N T GR N+R+ I + R
Sbjct: 221 IVKILASK-GIAPERLAAVGYGEFQPVASNATPEGRAQNRRVAIMVAKR 268
>gi|163801667|ref|ZP_02195565.1| Conserved hypothetical outer membrane protein [Vibrio sp. AND4]
gi|159174584|gb|EDP59386.1| Conserved hypothetical outer membrane protein [Vibrio sp. AND4]
Length = 216
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 5/122 (4%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G+ + + L L+ +A+ LNK + I + HTD+ G+ N
Sbjct: 97 TGEGLVARL---HFGFDHSSLTPMGKKALKQLASSLNKR-DSAITVDGHTDNKGSDGYNQ 152
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ RA + + N I VR F P+ +N T GR N+R+EI + +
Sbjct: 153 DLGLRRALAASN-GLTNAGVDNNNIVVRSFGESEPMASNATPEGRAQNRRVEIWVADKDA 211
Query: 188 IK 189
+K
Sbjct: 212 VK 213
>gi|126698325|ref|YP_001087222.1| putative chemotaxis protein [Clostridium difficile 630]
gi|115249762|emb|CAJ67579.1| putative OmpA/MotB proton channel [Clostridium difficile]
Length = 248
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 56/141 (39%), Gaps = 6/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
++ + + + + + + F + ++ + I +LN+
Sbjct: 95 EEIQKYLNENGMANSVSLRVQDRGLVISLKDTILFDTGKAIVKDNSRDKIIQIGKMLNEM 154
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
S + ++ HTD++ K+N +S RA + LI + +S G+ P
Sbjct: 155 NSY-MRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDKLSAVGYGEFRP 213
Query: 163 IDTNDTKVGRQNNQRIEIQIF 183
I N ++ GR N+R++I +
Sbjct: 214 IAENSSEEGRSKNRRVDIVLV 234
>gi|89093920|ref|ZP_01166865.1| OmpA/MotB [Oceanospirillum sp. MED92]
gi|89081806|gb|EAR61033.1| OmpA/MotB [Oceanospirillum sp. MED92]
Length = 265
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 69/176 (39%), Gaps = 8/176 (4%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL-DKAEDEFQMQLQDTGIVV-SRIGDM 71
+ +A E +K +++ DI + + + D+ E Q + + +
Sbjct: 85 VLPATNIADAEGEKPQENEAEFQDIELQTELNRMADEVSQELQAAINSDMAEIGTPKDGK 144
Query: 72 ITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----N 126
+ + V + + I ++ K P + I HTD+I N
Sbjct: 145 LVISLKGDVVFDPGSAEFHAEMMTTFDSIVLLMKKNPDYKLRINGHTDNIPIQTTRFPSN 204
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S RA + Y+++ G+ R ++ G+ P+++N T GR N+R+E +
Sbjct: 205 WDLSAIRATNVLRYMVRGGIDLER-VTATGYGESVPLESNRTLEGRAKNRRLEFVL 259
>gi|84388530|ref|ZP_00991077.1| Peptidoglycan-associated lipoprotein [Vibrio splendidus 12B01]
gi|84377079|gb|EAP93950.1| Peptidoglycan-associated lipoprotein [Vibrio splendidus 12B01]
Length = 180
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 60/181 (33%), Gaps = 7/181 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M ++ C ++ T+ GS + +
Sbjct: 6 VLKGLMIALPVM-AVTACSSTDE-----ATSATSGTESNQTTSGSEGNVDTTVVTPIDAN 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + + +L A L+ + I+ H D
Sbjct: 60 AQLSEQELKEQALRETQTIYFAFDNSTIAGDYEEILAAHAAYLSNNVDMNVTIEGHADER 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + YL IS+ + + P+ ++ N+R +
Sbjct: 120 GTPEYNIALGERRAQAVAKYLQAL-GVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAVL 178
Query: 181 Q 181
Sbjct: 179 V 179
>gi|269104382|ref|ZP_06157078.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161022|gb|EEZ39519.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 335
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 38/101 (37%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L L + + I + +TDS G+ N +S+ RAD +
Sbjct: 220 FAFDSSSISTGDAAKLVPFEQRLQEQDAAQIYVVGYTDSKGSEAYNQKLSERRADAVADA 279
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L I G P+ +N T+ GR N+R+EI
Sbjct: 280 LRAHLNVDGSRIIAEGRGEADPVASNQTEEGRAQNRRVEIV 320
>gi|291451540|ref|ZP_06590930.1| secreted protein [Streptomyces albus J1074]
gi|291354489|gb|EFE81391.1| secreted protein [Streptomyces albus J1074]
Length = 220
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 3/169 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + S + + + + + ++ + +
Sbjct: 39 GSTTSSPPPEISEDSAGLKLADGAELAPPKVLDIKSVVEDLGGEERREDTNTDVKFALQA 98
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V F L + +Q IA + + + TD +G+ ++ +S+ RAD +
Sbjct: 99 EVLFGKDSAKLNPEARGRIQAIAEEAQAQQANKVRVFGFTDDLGSYEHGKKLSKNRADAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
L++ N VRG++ YPI N T+ GR N+R+E+ FPRG
Sbjct: 159 HEELVKTLGP-NVTYEVRGYSEDYPIADNSTEAGRMKNRRVEVS-FPRG 205
>gi|281426147|ref|ZP_06257060.1| OmpA family protein [Prevotella oris F0302]
gi|299141901|ref|ZP_07035036.1| OmpA family protein [Prevotella oris C735]
gi|281399723|gb|EFB30554.1| OmpA family protein [Prevotella oris F0302]
gi|298576752|gb|EFI48623.1| OmpA family protein [Prevotella oris C735]
Length = 284
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + ++ + ++ + + + L+ IA I+ + + I+ +TD++
Sbjct: 136 VDIKVLKGVVYISLADNMLYKSGSYEINDRAEETLRKIAKIIMDYKDYDVLIEGNTDNVP 195
Query: 122 TL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+NN +S RA + YL R + + ++ G P+ +NDT++G+
Sbjct: 196 VNTKSAAMKNIRNNWDLSALRASSVVQYLQDRFGVAPKRLTAGGRGEYNPVASNDTELGK 255
Query: 173 QNNQRIEIQIFPR 185
Q N+R +I I P+
Sbjct: 256 QRNRRTQIIITPK 268
>gi|221213356|ref|ZP_03586331.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
gi|221166808|gb|EED99279.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
Length = 316
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K Y
Sbjct: 214 FETGSATLTPQGKQILDQMAAALAKLQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGY 273
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
LI + + + ++ G PI NDT GR N+RIE ++
Sbjct: 274 LITK-GIAPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRV 314
>gi|294782738|ref|ZP_06748064.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA]
gi|294481379|gb|EFG29154.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA]
Length = 127
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ ML + + + + + I+ HTDS+G+ + N+ +S+
Sbjct: 15 IVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQN-NYELTIEGHTDSVGSNQYNIGLSR 73
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA+ +K+ LI+ G+ +R + + +YP+ TN+T GR N+R+E ++ R
Sbjct: 74 RRAEAVKAKLIEFGLPEDRIVGIEAKGEEYPVATNETPEGRLQNRRVEFRLVQR 127
>gi|288929697|ref|ZP_06423541.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108]
gi|288329202|gb|EFC67789.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108]
Length = 295
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +L++ + V + ++ + ++ + + + L IA I+ + + +
Sbjct: 146 REELKE--VDVRVLKGVVYISLADNMLYKSGSYEINDRAAETLSKIAKIIMDYQDYDVLV 203
Query: 114 QSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ +TD++ + NN +S RA + YL R + + ++ G P+ TN T+
Sbjct: 204 EGNTDNVPITRENIRNNWDLSCLRASSVVQYLQTRYGVNPKRLTAGGRGEFNPVATNGTE 263
Query: 170 VGRQNNQRIEIQIFPR 185
VG+Q N+R +I I P+
Sbjct: 264 VGKQRNRRTQIIITPK 279
>gi|260869286|ref|YP_003235688.1| putative outer membrane lipoprotein [Escherichia coli O111:H- str.
11128]
gi|257765642|dbj|BAI37137.1| predicted outer membrane lipoprotein [Escherichia coli O111:H- str.
11128]
Length = 160
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 63/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHAHMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|220935190|ref|YP_002514089.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219996500|gb|ACL73102.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 252
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 59/166 (35%), Gaps = 9/166 (5%)
Query: 24 EKKKVFLHKSN--DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
E+ + + ++ E Q G+ V + I +
Sbjct: 84 EEAPATYPGEQPLAEPLAREEAPAAESALEQALARQGGLEGVEVFTTPGQVELRIKEGIL 143
Query: 82 F-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADV 136
F L +L + +LN I ++ HTD++ N +S RA
Sbjct: 144 FASGSAELRSDGRALLSSLMPVLNAAEG-QITVEGHTDNVPIFTPIFPSNWELSAARASG 202
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ LI G++ R + GFA P+ NDT GR N+R+ + I
Sbjct: 203 VVRQLIALGLAPER-LQAVGFADTRPVAGNDTAEGRAENRRVSLVI 247
>gi|330973477|gb|EGH73543.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 271
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + + + + + L+ + + L
Sbjct: 126 ASAQQQGRWLEDQILS--LATTETDRGLVMTLGDVLFDAGHAELKNSASRTILKVVQFLQ 183
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P V+ I+ +TDS G + NL +S++RA + ++ + I V G+ ++P++
Sbjct: 184 INPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVAD-VLMDLGIDEKRIHVEGYGQEFPVN 242
Query: 165 TNDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 243 ANTSERGRAQNRRVEIV 259
>gi|83718754|ref|YP_443463.1| OmpA domain-containing protein [Burkholderia thailandensis E264]
gi|167621163|ref|ZP_02389794.1| OmpA domain protein [Burkholderia thailandensis Bt4]
gi|257137752|ref|ZP_05586014.1| OmpA domain-containing protein [Burkholderia thailandensis E264]
gi|83652579|gb|ABC36642.1| OmpA domain protein [Burkholderia thailandensis E264]
Length = 311
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + M + S G T
Sbjct: 151 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYMIKNGLRVSASEQGLLDQTLANRTIEFE 210
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K P+ + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 211 TGSATLTPQGRTILDQMAGALAKMPNRTVEIIGHTDNSGNRASNIALSQSRADAVKGYLV 270
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI +ND+ GR N+RIE +
Sbjct: 271 TK-GIASQQLTTTGVGPDQPIASNDSADGRARNRRIEFR 308
>gi|153949967|ref|YP_001400351.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP
31758]
gi|152961462|gb|ABS48923.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
Length = 458
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 71/185 (38%), Gaps = 9/185 (4%)
Query: 5 LGLSMFIMTTISGCG--LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
L I+ T GC L+ E + + +V + + + ++
Sbjct: 274 LLCGFLIVATFIGCKYFLSVPESDLLKRMAALQRVVVTPPVAAPKLRLSILLKDEIAKQL 333
Query: 63 IVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + + V + + + +++ +A +++ I I HTDS+
Sbjct: 334 VSVDETSNNSKVIFKGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGA-ILIVGHTDSMP 392
Query: 122 TLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
K N ++S++RA + Y+ ++ I G P+ +ND GR N+R
Sbjct: 393 INKPGFPNNQVLSEKRAANVARYM-EQAGIPTDKIRFEGKGETQPVSSNDDATGRSQNRR 451
Query: 178 IEIQI 182
+EI +
Sbjct: 452 VEIFV 456
>gi|331674046|ref|ZP_08374808.1| YfiB [Escherichia coli TA280]
gi|331068785|gb|EGI40178.1| YfiB [Escherichia coli TA280]
Length = 160
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 63/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEALSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|255020134|ref|ZP_05292204.1| peptidoglycan-associated outer membrane lipoprotein
[Acidithiobacillus caldus ATCC 51756]
gi|254970427|gb|EET27919.1| peptidoglycan-associated outer membrane lipoprotein
[Acidithiobacillus caldus ATCC 51756]
Length = 193
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 65/179 (36%), Gaps = 3/179 (1%)
Query: 5 LGLSMFIMTTISGCGLA--SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ L+ + ++GC S K ++ G+ + + + +
Sbjct: 8 VALTAAGILALAGCASNVGSGAPKAAGPVAPAESANTAAYNGAGIGSQQLDANGPIGGAN 67
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
++ + L+ + + A + + ++ +TD GT
Sbjct: 68 SGLTAAELAALPQHLRVHFGFNSDSLDARAQEIASQNAQFMMNHAHVKVRLEGNTDDRGT 127
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ NL + + RA+ +K YL +GVS+ R IS F P+ + + N+R++
Sbjct: 128 QEYNLALGERRAEAVKRYLEAQGVSAAR-ISTVSFGKDNPLCNQNDESCWAKNRRVDFV 185
>gi|260591686|ref|ZP_05857144.1| OmpA family protein [Prevotella veroralis F0319]
gi|260536329|gb|EEX18946.1| OmpA family protein [Prevotella veroralis F0319]
Length = 288
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +L++ + V + ++ + ++ + + + L IA I+ + + I
Sbjct: 132 REELKE--VDVQVLKGVVYISLADNMLYKSGSYEINDRAEQTLSKIAKIITDYSDYDVLI 189
Query: 114 QSHTDSIGTL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ +TD++ +NN +S RA + YL + + ++ G P+
Sbjct: 190 EGNTDNVPINTANDKMKNIRNNWDLSCLRAASVVQYLQDHFNVNPKRLTAGGRGEYNPLA 249
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
TNDT++G+Q N+R +I I P+
Sbjct: 250 TNDTELGKQRNRRTQIIITPK 270
>gi|326203246|ref|ZP_08193111.1| OmpA/MotB domain protein [Clostridium papyrosolvens DSM 2782]
gi|325986504|gb|EGD47335.1| OmpA/MotB domain protein [Clostridium papyrosolvens DSM 2782]
Length = 258
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 61/156 (39%), Gaps = 14/156 (8%)
Query: 48 DKAEDEFQMQLQD--------TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQL 98
D+ + Q ++ + V+ I I + F +E +
Sbjct: 90 DQQMEALQEEISGLVDSEGLKGNVSVTMQERGIVVTINEKILFKSGSAIIEPNDQDTVIK 149
Query: 99 IATI-LNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
I L+K P+ I ++ HTD+I +N +S RA + L+ +G + + I+
Sbjct: 150 IGKDILSKIPNKHIRVEGHTDNIPMKSALYPSNWELSAARAINVLKLLVDKGGINPKMIA 209
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ P+ N T + R N+R++I I + K
Sbjct: 210 PVPYGEYSPLVPNTTDINRAKNRRVDIVILRDSSSK 245
>gi|253996642|ref|YP_003048706.1| OmpA/MotB domain-containing protein [Methylotenera mobilis JLW8]
gi|253983321|gb|ACT48179.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8]
Length = 271
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 57/147 (38%), Gaps = 7/147 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ ++ + + I V + I I ++ F L ++ I ++
Sbjct: 115 EVSNKLAPMINEGKIQVIQTSRGIRIDIQDNLLFGAGSADLSPTANAIISEIVPLIKDN- 173
Query: 108 STVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
I ++ HTD+ +N +S RA + L+ S + +S G PI
Sbjct: 174 QRKIQVEGHTDNTPIHNATFFSNWELSAVRASSVVR-LLSALGISEQRLSATGLGASQPI 232
Query: 164 DTNDTKVGRQNNQRIEIQIFPRGNIKK 190
N+++ GR N+R+ I I I++
Sbjct: 233 SENESEAGRAKNRRVSIIITYELPIQE 259
>gi|240851216|ref|YP_002972619.1| peptidoglycan-associated lipoprotein [Bartonella grahamii as4aup]
gi|240268339|gb|ACS51927.1| peptidoglycan-associated lipoprotein [Bartonella grahamii as4aup]
Length = 173
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 24/175 (13%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L + F ++GCG + +N G+ ++ + +
Sbjct: 11 SLAVLFFFALCLAGCGKKNV-------------GALNGMNGAYMN--DAGLNQVPPGS-- 53
Query: 64 VVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
G T + V F L+ +L A L +P I I+ H D GT
Sbjct: 54 -----GQEFTVNVGDRVFFSLDSSSLDADAERILTRQAEWLLHYPYYSIMIEGHADERGT 108
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NL + Q RA +++YL+ S + I + + P+ D N+R
Sbjct: 109 REYNLALGQRRAVAVRNYLVSL-GVSEQRIQTISYGKERPVAVCDDISCWNQNRR 162
>gi|150377808|ref|YP_001314403.1| OmpA/MotB domain-containing protein [Sinorhizobium medicae WSM419]
gi|150032355|gb|ABR64470.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419]
Length = 420
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+K+ + + + S+ + + + + D+ +
Sbjct: 33 RKLLMAGALLAGTNTPSWSQSMTDPVNRYSKESMQQALQTREQYDVHGLS-----FDTGQ 87
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ P+L IAT L FP + I HTD+ G+ ++N +S ERAD IK+ L++RG
Sbjct: 88 STLQPSAKPLLDDIATALKNFPDWGLRIVGHTDASGSAESNERLSLERADTIKAALVERG 147
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ + + ++ G PI +N+T GR N+R+E+
Sbjct: 148 IDAGKLLAA-GAGQNRPIASNETDEGRALNRRVEL 181
>gi|84499777|ref|ZP_00998065.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
gi|84392921|gb|EAQ05132.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
Length = 641
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ +L IA +L + I HTDS G N +SQ+RAD + +
Sbjct: 499 FEPGSATVTGDSRAILDDIAEVLKFCGPVDLEIGGHTDSQGREIMNEQLSQDRADTVLAE 558
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L QR V + F++ G+ PI NDT+ GR+ N+RIE +
Sbjct: 559 LRQRRVKTAGFVAT-GYGETQPIADNDTEEGREENRRIEFSLI 600
>gi|66045239|ref|YP_235080.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|63255946|gb|AAY37042.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
Length = 271
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + + + + + L+ + + L
Sbjct: 126 ASAQQQGRWLEDQILS--LATTETDRGLVMTLGDVLFDAGHAELKNSASRTILKVVQFLQ 183
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P V+ I+ +TDS G + NL +S++RA + ++ + I V G+ ++P++
Sbjct: 184 INPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVAD-VLMDLGIDEKRIHVEGYGQEFPVN 242
Query: 165 TNDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 243 ANTSERGRAQNRRVEIV 259
>gi|124267424|ref|YP_001021428.1| putative signal peptide protein [Methylibium petroleiphilum PM1]
gi|124260199|gb|ABM95193.1| putative signal peptide protein [Methylibium petroleiphilum PM1]
Length = 219
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + L +A+ + V+ HTDS+G+ N +S R++ +
Sbjct: 109 DAFFDFDKATLKPEAKSKLDDLASKIAGLNLEVVIAVGHTDSVGSDAYNQKLSLRRSEAV 168
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL + I G K P+ N T GR N+R EI++
Sbjct: 169 KAYLESK-GIEKNRIYTEGKGEKQPVADNKTADGRAKNRRTEIEVV 213
>gi|257462480|ref|ZP_05626892.1| Outer membrane protein [Fusobacterium sp. D12]
Length = 217
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 75/197 (38%), Gaps = 64/197 (32%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + + +G+ D+ E + L++T + V R G+
Sbjct: 53 GKDTKGTLIGAGVGALAGLGWGAYRDQQEAALRASLKNTAVQVQRDGE------------ 100
Query: 83 VSEVFLEKKFLPMLQLIATI--------------------------------LNKFPSTV 110
L ++P T
Sbjct: 101 -------------------NISLYLPGGVTFASDSAQISGNFYSALNSIAQVLVQYPETQ 141
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I +Q HTDS G+ ++N+ +S RA+ +K YLI + ++ ++ +GF P+ N T
Sbjct: 142 ILVQGHTDSTGSFQHNMDLSNRRANSVKQYLIGQ-GVASNRLTSQGFGPNNPVADNSTPE 200
Query: 171 GRQNNQRIEIQIFPRGN 187
GRQ N+R+EI+I P+ N
Sbjct: 201 GRQMNRRVEIKIAPKYN 217
>gi|255099860|ref|ZP_05328837.1| putative chemotaxis protein [Clostridium difficile QCD-63q42]
Length = 246
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 56/141 (39%), Gaps = 6/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
++ + + + + + + F + ++ + I +LN+
Sbjct: 93 EEIQKYLNENGMANSVSLRVQDRGLVISLKDTILFDTGKAIVKDNSRDKIIQIGKMLNEM 152
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
S + ++ HTD++ K+N +S RA + LI + +S G+ P
Sbjct: 153 NSY-MRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDKLSAVGYGEFRP 211
Query: 163 IDTNDTKVGRQNNQRIEIQIF 183
I N ++ GR N+R++I +
Sbjct: 212 IAENSSEEGRSKNRRVDIVLV 232
>gi|288801555|ref|ZP_06406997.1| OmpA family protein [Prevotella melaninogenica D18]
gi|302345028|ref|YP_003813381.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
gi|288335597|gb|EFC74030.1| OmpA family protein [Prevotella melaninogenica D18]
gi|302149794|gb|ADK96056.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
Length = 286
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 65/141 (46%), Gaps = 12/141 (8%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +L++ + V + ++ + ++ + + + L IA I+ + + I
Sbjct: 130 REELKE--VDVQVLKGVVYISLADNMLYKSGSYEVNDRAEQTLSKIAKIITDYKDYDVLI 187
Query: 114 QSHTDSIGTL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ +TD++ +NN +S RA + YL R + + ++ G P+
Sbjct: 188 EGNTDNVPINTTTDKMKNIRNNWDLSCLRAASVAQYLQDRFGVNPKRLTAGGRGEYNPLA 247
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
TNDT++G+Q N+R +I I P+
Sbjct: 248 TNDTELGKQRNRRTQIIITPK 268
>gi|187779120|ref|ZP_02995593.1| hypothetical protein CLOSPO_02715 [Clostridium sporogenes ATCC
15579]
gi|187772745|gb|EDU36547.1| hypothetical protein CLOSPO_02715 [Clostridium sporogenes ATCC
15579]
Length = 254
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 73/216 (33%), Gaps = 36/216 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS------------------ 46
L L + + + K + + N
Sbjct: 23 LTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKAGSNVVQEGGGGGASVGKAGVSIVPS 82
Query: 47 --------LDKAEDEFQMQLQDTG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ + + + +++ +G + V D + I V F + + K+
Sbjct: 83 DSVTEDIKMKEIKSNLEKEIKKSGYSDKVKVGVDADGLEIDIQDVVLFNSGDAEVLKQSS 142
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSN 149
+L I+ +L I I HTD+ ++N +S RA + ++L G
Sbjct: 143 ALLTQISKMLKGL-DNNIKITGHTDNKPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPA 201
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S++ + P N T+VGR N+R+EI I +
Sbjct: 202 NKLSIQAYGEYMPKFDNATEVGRAKNRRVEIAIVRK 237
>gi|90408384|ref|ZP_01216546.1| OmpA family protein [Psychromonas sp. CNPT3]
gi|90310477|gb|EAS38600.1| OmpA family protein [Psychromonas sp. CNPT3]
Length = 201
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 82/188 (43%), Gaps = 6/188 (3%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHK--SNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+L L M + +S C L + + K + + + + + + +
Sbjct: 2 KLFLIMLLTFFVSACSLQAIDMAKEPTEQKFDLSDEEADGVILARDNCPGSVLGADINNN 61
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFL-EKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ + + ++F ++ ++ +LP ++ ++ ++++P T + I+ HT
Sbjct: 62 GCGLTT---AVKVRAQLMINFETDSYVVSSNYLPKIEHLSQFMHEYPQTTVTIEGHTSHR 118
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT N ++SQ+RAD+IK LI+ I+ G+ + + D + N+RI
Sbjct: 119 GTASYNKILSQQRADMIKKILIEEYQVEASRITAIGYGFDQLLLEGDDEYVHARNRRIVA 178
Query: 181 QIFPRGNI 188
+I +I
Sbjct: 179 EISSEKHI 186
>gi|269119253|ref|YP_003307430.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
gi|268613131|gb|ACZ07499.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
Length = 366
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 17/185 (9%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI-----GDMITCY 75
K +S + + FG+ + IVV+ G +
Sbjct: 165 TDNNDKNHSGTESQVSLKLGFTFGAGEKRDYPVLPAARPVEPIVVTPEKPAPIGKTMDLT 224
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATI---LNKFPSTV--IAIQSHTDSIGTLKNNLLIS 130
+ + +++ ++ A LN+ + + I HTDS G + N +S
Sbjct: 225 VSGAYFDFDKATVKENAKQEIRGAAQQIKNLNQNNNLTGVLDIAGHTDSKGAKEYNQKLS 284
Query: 131 QERADVIKSYLIQRGVSSN-RFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQIF 183
+ RA + Q + N +V G+ P+ N D GR N+R+E++ +
Sbjct: 285 ERRAAAVADVYTQVIGTGNGIRYNVAGYGEDRPVAPNTLPNGKDNPEGRARNRRVEVKFY 344
Query: 184 PRGNI 188
P I
Sbjct: 345 PDNKI 349
>gi|167626696|ref|YP_001677196.1| OmpA family protein [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|167596697|gb|ABZ86695.1| OmpA family protein [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 418
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 77/196 (39%), Gaps = 24/196 (12%)
Query: 2 IKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L + + ++ TI+GC + + + S T L+ +
Sbjct: 1 MKKLFNFAIVLLLVFTIAGCETFTGSENPSDENLSFPT----------LEPCTKKLIESN 50
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q + + G + L + +L + L +T I+ +
Sbjct: 51 QSFICLKEQQGPDLIQT--NIKFDADSYNLNDQAKQILNKLYAYLKLTDTTTFTIRGYAG 108
Query: 119 SIGTL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ + + N+ +S+ RA+ ++ YL++RG+ N I ++ Y+ PI NDT
Sbjct: 109 KVESKLLTDKNILTEYNIRLSKNRAESVEEYLVRRGLDKNNGIIIKALGYQDPIAPNDTS 168
Query: 170 VGRQNNQRIEIQIFPR 185
R NQR+EI + R
Sbjct: 169 SNRAINQRVEITLKSR 184
>gi|329935272|ref|ZP_08285238.1| hypothetical protein SGM_6755 [Streptomyces griseoaurantiacus M045]
gi|329305095|gb|EGG48954.1| hypothetical protein SGM_6755 [Streptomyces griseoaurantiacus M045]
Length = 218
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 67/163 (41%), Gaps = 2/163 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G S + + ++ + + ++ + +T +
Sbjct: 38 GTVETSPPPTVDPNSPGLKLADGATLAAAKVLDIKSVVEDLGGEERREDTNENVTFALQA 97
Query: 79 HVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V F + L + + IA + K + + + TD++G+ + L++S+ RA+ +
Sbjct: 98 EVLFPKDSPKLNPEARSRIDAIAEEIKKQNAQAVRVFGFTDNLGSYAHGLVLSKRRAEAV 157
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
L R + + VRG++ YPI N ++ GR+ N+R+E+
Sbjct: 158 HDELASR-LDGDVTFEVRGYSEDYPIADNTSEQGRRKNRRVEV 199
>gi|257454195|ref|ZP_05619465.1| outer membrane protein, OmpA/MotB family [Enhydrobacter aerosaccus
SK60]
gi|257448368|gb|EEV23341.1| outer membrane protein, OmpA/MotB family [Enhydrobacter aerosaccus
SK60]
Length = 172
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 67/188 (35%), Gaps = 27/188 (14%)
Query: 2 IKELGL------SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+K L +M ++GC +V + V G
Sbjct: 1 MKLTILKVVSAAAMMATIALTGCSAKRTGTSEVVV----APMGVPGGVGYY--------- 47
Query: 56 MQLQDTGIVVSRIGDMITC---YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ G VV+ +IT ++ + +L A L PS +A
Sbjct: 48 ----NGGAVVTNSTSVITAAGANPNTVYFGFDSSEIDAQGQAVLNQQAQFLQANPSARVA 103
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTD G+ + NL + + RA ++YL GVS++R ++ + P D +
Sbjct: 104 IAGHTDERGSREYNLALGERRAQAAQAYLATSGVSASRMEAIS-YGEDQPADPGHDESAW 162
Query: 173 QNNQRIEI 180
N+R EI
Sbjct: 163 AKNRRAEI 170
>gi|256370966|ref|YP_003108790.1| OmpA/MotB domain protein [Acidimicrobium ferrooxidans DSM 10331]
gi|256007550|gb|ACU53117.1| OmpA/MotB domain protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 258
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 61/165 (36%), Gaps = 8/165 (4%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-V 83
++ + + + +++A L VV ++ + V F
Sbjct: 88 PPQITIPQPGAGTPSESQIAQEVNQALAA--QGLSQDAQVVVEQRGVVVRILSDKVFFAT 145
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKS 139
L ++ IA +L P+ ++I+ +TDS G +N +S RA +
Sbjct: 146 DSAALGPVGDAVVDAIAGVLRTLPN-DVSIEGYTDSEPIVGGPYSSNFELSAVRAVTVLE 204
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
L + + +S GF +P+ N T N+R++I I
Sbjct: 205 RLWKVDGINPDRLSATGFGDTHPLVPNTTPQNMAMNRRVDIVILS 249
>gi|227873541|ref|ZP_03991786.1| conserved hypothetical protein [Oribacterium sinus F0268]
gi|227840631|gb|EEJ51016.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length = 385
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 11/176 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD---TGIVVSRIGDMITCYIPV 78
+ K + + N +++++ + L G+ VSR D
Sbjct: 69 ATNKDEPAGEIGDSGAPENTVDPNNINELYLQIAQALNGAGIDGVEVSRGQDYTFVVFKD 128
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLI-----S 130
F + + L + + + + + HT + N S
Sbjct: 129 KAFFAGDSSVITPQGQETLSIFCDTIAPDANKLSQVNVMGHTAQADPERANNPRNDRILS 188
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
RA + ++ RG+ S + G+ +PI N T GR N+R+EI + G
Sbjct: 189 VMRAAEVCLFIQGRGIISPDKLVSIGYGQFHPIADNATSEGRAKNRRVEILLIDEG 244
>gi|330899174|gb|EGH30593.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 271
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + + + + + L+ + + L
Sbjct: 126 ASAQQQGRWLEDQILS--LATTETDRGLVMTLGDVLFDAGHAELKNSASRTILKVVQFLQ 183
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P V+ I+ +TDS G ++NL +S++RA + ++ + I V G+ ++P++
Sbjct: 184 INPRRVVRIEGYTDSTGDRQDNLKLSKDRAQAVAD-VLMDLGVDEKRIHVEGYGQEFPVN 242
Query: 165 TNDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 243 ANTSERGRAQNRRVEIV 259
>gi|296130397|ref|YP_003637647.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
gi|296022212|gb|ADG75448.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
Length = 355
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 2/128 (1%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ + V + + + V F L + L +A + + + +
Sbjct: 222 RSSDLAGDVQVEESPEQVGIVLDASVLFAFDSAELAPEAQSRLAEVAADIAARGTGEVVV 281
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+TDS G N +S++RA + + L S G P+ +NDT G+Q
Sbjct: 282 TGYTDSDGDRSYNQTLSEQRAQSVVAALQPAAG-GAVTFSAVGEGESDPVASNDTDEGKQ 340
Query: 174 NNQRIEIQ 181
N+R+ I
Sbjct: 341 ANRRVTIV 348
>gi|194288765|ref|YP_002004672.1| replication/virulence associated protein; outer membrane protein,
ompa family membrane protein [Cupriavidus taiwanensis
LMG 19424]
gi|193222600|emb|CAQ68603.1| replication/virulence associated protein; putative outer membrane
protein, OmpA family membrane protein [Cupriavidus
taiwanensis LMG 19424]
Length = 425
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + + ++ + V + + +K LP+L +A ++K
Sbjct: 287 RLAELLRDEIARGVVSVQEDATRSAITFRGDDMFGRGRADVSEKILPLLDKVAAEVSKVT 346
Query: 108 STVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + HTD++ +N +S+ERA + YL + + + G P+
Sbjct: 347 G-KVTVIGHTDNVPIKTAKYPSNQALSEERAATVAEYLASK-GVAKNRLEAIGKGDSQPL 404
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
N VGR N+R+EI +
Sbjct: 405 ADNKAPVGRARNRRVEIVVT 424
>gi|120436663|ref|YP_862349.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
gi|117578813|emb|CAL67282.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
Length = 281
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 5/133 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L D I ++ ++ I + F ++ + +L +AT++ P+ ++ H
Sbjct: 129 LSDEDIEINVEKGVVYVSISDKLLFDSGRYNIKPRAKEVLGKVATVVKNKPNIEFMVEGH 188
Query: 117 TD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD S ++N +S +RA + L ++ G +Y P+ +N+T GR
Sbjct: 189 TDDQAISTSMFEDNWDLSVKRATSVVRVLQDDFGIEPARMTAAGRSYYIPVASNETAEGR 248
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 249 AKNRRTRIVVLPK 261
>gi|221134115|ref|ZP_03560420.1| putative outer membrane adhesin like proteiin [Glaciecola sp.
HTCC2999]
Length = 2282
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 7/133 (5%)
Query: 65 VSRIGDMITCYIP-----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
V + G ++ + ++ L + +AT + +P T + I+ HTD+
Sbjct: 2150 VDKTGCTLSVTETISMRLNLLFAINSSQLTSNDKLEVMKLATFMQTYPDTSVVIEGHTDA 2209
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI- 178
GT K N +SQ+RA V+ LI + + I GF + T+ N+R
Sbjct: 2210 RGTDKYNQWLSQQRAAVVGKLLINQHNIAPERIETIGFGETQLLIDATTEAQHALNRRTI 2269
Query: 179 -EIQIFPRGNIKK 190
EI I KK
Sbjct: 2270 AEITIIKNVEKKK 2282
>gi|119944462|ref|YP_942142.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37]
gi|119863066|gb|ABM02543.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37]
Length = 331
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 5/128 (3%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ + + + + IP V L K++ L+ IA L K+P +
Sbjct: 200 AMEPAVAEPQKTIDIEP--LIIEIP---FAFDSVKLAPKYIDQLKPIAQQLIKYPEAELI 254
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+ HTDS G N +S+ RA ++ YL + I G P +N TK GR
Sbjct: 255 VIGHTDSTGPESYNQQLSERRAALVADYLATHFAIAKNRIKESGRGELAPKASNATKDGR 314
Query: 173 QNNQRIEI 180
N+R+ +
Sbjct: 315 ALNRRVSV 322
>gi|50083884|ref|YP_045394.1| putative lipoprotein [Acinetobacter sp. ADP1]
gi|49529860|emb|CAG67572.1| putative lipoprotein precursor [Acinetobacter sp. ADP1]
Length = 159
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 65/182 (35%), Gaps = 30/182 (16%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ + I ++GC K K LQ G
Sbjct: 7 KISILGVICLILAGCLSFGPLKYKQV--------------------------KMLQKEGF 40
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V + + T +P + F + + + +A LNK+ + + +TD+IG
Sbjct: 41 V--QTDEGWTLGLPERLLFEFDKSEVNPAHQQEIIRLANQLNKYGLHKLKVVGYTDNIGN 98
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NL +SQ RA + + I + I + G P+ N T+ R N+R+ I I
Sbjct: 99 RDYNLKLSQARAQSVAAIFINNS-FTPNHIQIIGRGSNQPLLPNTTEENRAANRRVAIVI 157
Query: 183 FP 184
P
Sbjct: 158 VP 159
>gi|49081488|gb|AAT50144.1| PA1119 [synthetic construct]
Length = 169
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 63/184 (34%), Gaps = 28/184 (15%)
Query: 5 LGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L L++F + ++GC + E LQ+ G
Sbjct: 12 LALALFSLVLGLAGCQTKPPQTG-----------------------LSAEQIAVLQEQGF 48
Query: 64 VVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ G + V F + L L IA L + ++ HTD+ G
Sbjct: 49 ELRDEGWE--FGMSSKVLFGNNLDRLNPDSRNTLTKIARALLAVDIGKVRLEGHTDNYGD 106
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA+ + + + I VRG P+ N T+ GR N+R+ I +
Sbjct: 107 EGYNQKLSERRAESVAAVFREA-GMPAANIEVRGLGMSKPVADNKTRAGRSENRRVAIIV 165
Query: 183 FPRG 186
G
Sbjct: 166 PAEG 169
>gi|171057646|ref|YP_001789995.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170775091|gb|ACB33230.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 243
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ L + + + VI HTDS G+ N + RA+ +
Sbjct: 132 DAFFDTGKFVLKPDAASKLDDLVSKVKDINLEVIIAVGHTDSDGSDAYNQKLGVNRAEAV 191
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
K YL+ + + G K P+ N TK G+ N+R+EI++ IKK
Sbjct: 192 KKYLVSK-GVEQNRVYTEGKGEKQPVADNGTKEGKAKNRRVEIEVVGTRTIKK 243
>gi|238026069|ref|YP_002910300.1| OmpA/MotB [Burkholderia glumae BGR1]
gi|237875263|gb|ACR27596.1| OmpA/MotB [Burkholderia glumae BGR1]
Length = 355
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ + + + + ++ S + + + S G T
Sbjct: 195 DGTSIDVKGEVRNEALRQQVASDMANQLNPTYTIRNALRVSASEQGLLDQTLANRTIEFE 254
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A +++ + +AI HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 255 TGSATLTPQGRAILDQMAAAMSRMANRSVAIIGHTDNSGNRASNIALSQARADAVKGYLV 314
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ ++ +S G PI +NDT GR N+RIE +
Sbjct: 315 AK-GIPSQQLSTTGVGPDQPIASNDTAEGRARNRRIEFR 352
>gi|194333586|ref|YP_002015446.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii
DSM 271]
gi|194311404|gb|ACF45799.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii
DSM 271]
Length = 169
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 15/175 (8%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ ++GC S + + + + +AE+ +
Sbjct: 9 IVVCAFLVTGCASKSSQSIIGGDTGVVNGNGYGDSSVRTYSEAEEALR------------ 56
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
D + L+ L+ A + PS + I+ H D GT + N+
Sbjct: 57 --DEARLALKDVFFSFESADLDILATTQLKRNAEWMIAHPSVSVIIEGHCDERGTGEFNM 114
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + RAD I + + ++ I + + P + N+R +
Sbjct: 115 ALGERRAD-ISKSFLVKAGVASSRIQTVSYGEERPFEAGHDDSAWAKNRRAHFVV 168
>gi|114330317|ref|YP_746539.1| OmpA/MotB domain-containing protein [Nitrosomonas eutropha C91]
gi|114307331|gb|ABI58574.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91]
Length = 173
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 67/182 (36%), Gaps = 16/182 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKS--NDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+ L++ ++ +S C + ++ S + R G+ D+
Sbjct: 1 MKK-FLAVLAISLLSACASDNAQQTSDIEDHSYSRGGESEGMRSGTGSDRF--------- 50
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G+ + + I ++ ++ ++ A L + + +Q +TD
Sbjct: 51 --GMNPLQDPNNI-LSRRSVYFDFDSYTVKGEYRDLVLAHAAYLRDNLNAQVLLQGNTDE 107
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + NL + Q RA+ +K ++ + ++ + + P + N+R +
Sbjct: 108 RGSREYNLALGQRRANSVKD-ILLLSGARDQQVEAVSLGEEKPRALGSDESSWAENRRTD 166
Query: 180 IQ 181
I
Sbjct: 167 IL 168
>gi|237706550|ref|ZP_04537031.1| OmpA family membrane protein [Escherichia sp. 3_2_53FAA]
gi|226899590|gb|EEH85849.1| OmpA family membrane protein [Escherichia sp. 3_2_53FAA]
Length = 146
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
F + V L+ +L + P +I + +TD+ G K+N +S RA+ +++++
Sbjct: 35 FATGVRLKDGSTKVLVDALVNIRAKPGWLILVAGYTDATGDEKSNQQLSLRRAEAVRNWM 94
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+Q +V+G P TNDT GR N+R+EI + PR +
Sbjct: 95 LQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVPRSD 140
>gi|149201621|ref|ZP_01878595.1| flagellar MotB protein [Roseovarius sp. TM1035]
gi|149144669|gb|EDM32698.1| flagellar MotB protein [Roseovarius sp. TM1035]
Length = 383
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 63/167 (37%), Gaps = 9/167 (5%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
E + + + + + Q ++ + + V + D + + +F
Sbjct: 218 EVMQGKAEAETQAGQSARSAAIADAQLQVALQQEIGEGLVSVEQREDKVVITVGEGGAFP 277
Query: 84 -SEVFLEKKFLPMLQLIA-TILNKFPSTVIAIQSHTDSIG-----TLKNNLLISQERADV 136
L + ++ +A + + ++ I + HTDS+ ++N ++ RA
Sbjct: 278 SGGADLTDEARDVMARLAFAAMGE--ASEIVVTGHTDSVPLGGASPYRDNWGLAAARASS 335
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ L G+ ++ P+ NDT GR N+RIEI+I
Sbjct: 336 VVRELSGSGLIEPERLTATSRGESLPVAENDTAAGRAQNRRIEIEIT 382
>gi|94264973|ref|ZP_01288744.1| OmpA/MotB [delta proteobacterium MLMS-1]
gi|93454576|gb|EAT04854.1| OmpA/MotB [delta proteobacterium MLMS-1]
Length = 192
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 23/181 (12%), Positives = 57/181 (31%), Gaps = 3/181 (1%)
Query: 5 LGLSMFIMTTISGCGLASR-EKKKVFLHKSNDTDIVN-KRFGSSLDKAEDEFQMQLQDTG 62
+ L + GC + E + + D + + AEDE + G
Sbjct: 12 VALVCLVALLTFGCAKPVKVEPVEPAEPMVAEPDHPPWEPEHTWPGPAEDELLTDTGERG 71
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
++ + + + + + + + ++ +TD GT
Sbjct: 72 DELAVREGRTSDPLLPVYFDFDRSHIRGDQEERITHNGEYMLDNRTVRVRVEGNTDERGT 131
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ N+ + + RA K + ++ + + + PI + N+R++ I
Sbjct: 132 REYNMALGERRAMSAKK-YLMDMGIASGRLETVSYGEERPIAFGQDEESWSLNRRVDFVI 190
Query: 183 F 183
Sbjct: 191 L 191
>gi|120599910|ref|YP_964484.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|146292153|ref|YP_001182577.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|120560003|gb|ABM25930.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
gi|145563843|gb|ABP74778.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
gi|319425449|gb|ADV53523.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 366
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 50/109 (45%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ + ++ +A LNK P + I H ++G + N+++S +RA
Sbjct: 249 DVGSIQFANDSAVVKNVYYKDIERLANYLNKNPEFTVEIAGHASNVGKPEYNMVLSDKRA 308
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
D + + L+++ S ++ G+ P+ D+K N+RIE +
Sbjct: 309 DAVANILVEKFGISRSRVTSNGYGITQPLVAGDSKEAHAANRRIEAIVT 357
>gi|215487943|ref|YP_002330374.1| putative outer membrane lipoprotein [Escherichia coli O127:H6 str.
E2348/69]
gi|215266015|emb|CAS10427.1| predicted outer membrane lipoprotein [Escherichia coli O127:H6 str.
E2348/69]
Length = 160
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASIGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N ++S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEVLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|84394243|ref|ZP_00992970.1| Outer membrane protein [Vibrio splendidus 12B01]
gi|84375118|gb|EAP92038.1| Outer membrane protein [Vibrio splendidus 12B01]
Length = 356
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 6/136 (4%)
Query: 52 DEFQMQLQDTGIVVSRIGDMIT-----CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + +VV ++ + + L L + +L
Sbjct: 202 QAPSEPITEPAVVVEEKMAVVVTKAQTESYSQEMFATNSTELSTDGKIALMPLVEVLKAH 261
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
P + +A+ HTDS G + NL+IS++RA + + I+ I+ G + PI +N
Sbjct: 262 PQSSVAVVGHTDSTGAAEYNLMISKKRAAAVAA-YIEEQGIEADRITASGEGEENPIASN 320
Query: 167 DTKVGRQNNQRIEIQI 182
T GR N+R++ I
Sbjct: 321 ATAEGRAQNRRVDATI 336
>gi|330951673|gb|EGH51933.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 271
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + + + + + L+ + + L
Sbjct: 126 ASAQQQGRWLEDQILS--LATTETDRGLVMTLGDVLFDAGHAELKNSASRTILKVVQFLQ 183
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P V+ I+ +TDS G + NL +S++RA + ++ + I V G+ ++P++
Sbjct: 184 INPRRVVRIEGYTDSTGDRQENLTLSKDRAQAVAD-VLMDLGIDEKRIQVEGYGQEFPVN 242
Query: 165 TNDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 243 ANTSERGRAQNRRVEIV 259
>gi|296273863|ref|YP_003656494.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM
7299]
gi|296098037|gb|ADG93987.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299]
Length = 180
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 7/180 (3%)
Query: 2 IKELGLSMFIMTTI--SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+ GL F+ T+ +GC + E + +N +N + + M
Sbjct: 1 MKKYGLLAFMAATLLFTGCSQKTVEMENTTPTPTNSESSLNTVETTDNSGMTAD-NMTTD 59
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G G + + L + + A+ L + I+ + D
Sbjct: 60 GKGNYFVVNGKKVFV--ESIYFGFDKFKLTEDQRKVASDNASKLKGLSG-SVKIEGNCDE 116
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N + +RA V+K L+ ++ IS+ F P+ + TK N+R E
Sbjct: 117 WGTDEYNYALGLKRAKVVKDALVS-DGIASNSISIVSFGESNPVCSEKTKECWAKNRRAE 175
>gi|192290369|ref|YP_001990974.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
gi|192284118|gb|ACF00499.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
Length = 441
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++K P+L +A + + P+ I + +TD G N+ +S+ RA+ + +
Sbjct: 340 FERRSAVIDKASQPLLDKLAAAIKQCPAVTIEVAGYTDGAGKKSANVALSKRRAEAVVA- 398
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + + G+ PI NDT GR N+RIE +
Sbjct: 399 SLTKVGIGSVKLVAEGYGSAKPIAANDTAEGRAQNRRIEFVV 440
>gi|110806727|ref|YP_690247.1| putative outer membrane lipoprotein [Shigella flexneri 5 str. 8401]
gi|110616275|gb|ABF04942.1| putative outer membrane protein [Shigella flexneri 5 str. 8401]
Length = 160
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ + G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEGLSLKRANVVADAWVIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|261854755|ref|YP_003262038.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261835224|gb|ACX94991.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 364
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + L+ + P L +L + S + I HTD G+ N +SQ+
Sbjct: 255 RVRLDGIFFDSGKALLKPESNPALDQAVQLLRQQASLKLLIAGHTDDTGSHAANQKLSQQ 314
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA+ +++ L+ R + ++ +GF P+ N + GR N+R+E+
Sbjct: 315 RAEAVRNALLAR-GIAADRLTAQGFGSGVPLADNASDAGRAQNRRVELV 362
>gi|254497489|ref|ZP_05110282.1| flagellar motor protein MotD [Legionella drancourtii LLAP12]
gi|254353304|gb|EET12046.1| flagellar motor protein MotD [Legionella drancourtii LLAP12]
Length = 255
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 8/177 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ E+ + T V +F LD +L+D ++R I I
Sbjct: 61 AQENSEQSTEDIKDGPHTKKVYGKFQDGLDDINQSLS-ELEDQNYKINRQKGWIELDIKS 119
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQER 133
F + L+ + L L IA L K +++I+ +TD+ +N +S R
Sbjct: 120 GALFGSGDADLKAEALVKLMQIAGKLKK-SHAIVSIEGYTDNVPIETPQYPSNWELSATR 178
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + ++ + I V G+ +YPI N T VGR N+R+ I I K+
Sbjct: 179 AASVGR-VLNAYGIDSHRIMVTGYGDQYPIADNVTDVGRALNRRVSIIIAVNRKTKR 234
>gi|237748798|ref|ZP_04579278.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes
OXCC13]
gi|229380160|gb|EEO30251.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes
OXCC13]
Length = 169
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 10/177 (5%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + + ++ CG + + + + + + + + L D
Sbjct: 1 MVVIVSGALILTACGSSVKLDENAPVEDKSASGSSSSMDSRQVGTVTAGSLDPLNDPKGE 60
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ ++ P++Q A LN + IQ +TD G +
Sbjct: 61 ---------LAQRSVYFDFDSFVVSSQYEPVVQAHAKYLNSHKDRKVVIQGNTDDRGGRE 111
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL + Q+RA+ + + S+ I F + P T + + N+R +I
Sbjct: 112 YNLALGQKRAEAV-RKSMNLMGVSDSQIEAVSFGKEKPKATGNNEAAWAENRRADIV 167
>gi|226229138|ref|YP_002763244.1| hypothetical protein GAU_3732 [Gemmatimonas aurantiaca T-27]
gi|226092329|dbj|BAH40774.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 457
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 50/109 (45%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + + P L+ IA +L++ + I+ HTD++G NL +SQ
Sbjct: 347 RVATQGIYFDTGKDVIRPESTPTLKEIAAMLSEHADLQLIIEGHTDNVGAAPANLALSQR 406
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RAD ++S L+ ++ +G P N T GRQ N+R+E+
Sbjct: 407 RADAVRSALVSDYGIDGGRLTAKGLGQTVPATANTTPEGRQQNRRVELV 455
>gi|16130526|ref|NP_417096.1| probable positive effector of YfiN activity, OM lipoprotein
[Escherichia coli str. K-12 substr. MG1655]
gi|89109406|ref|AP_003186.1| predicted outer membrane lipoprotein [Escherichia coli str. K-12
substr. W3110]
gi|170082209|ref|YP_001731529.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr.
DH10B]
gi|238901765|ref|YP_002927561.1| putative outer membrane lipoprotein [Escherichia coli BW2952]
gi|254037681|ref|ZP_04871739.1| outer membrane lipoprotein [Escherichia sp. 1_1_43]
gi|256024868|ref|ZP_05438733.1| putative outer membrane lipoprotein [Escherichia sp. 4_1_40B]
gi|300949000|ref|ZP_07163053.1| OmpA family protein [Escherichia coli MS 116-1]
gi|300957389|ref|ZP_07169603.1| OmpA family protein [Escherichia coli MS 175-1]
gi|301644047|ref|ZP_07244063.1| OmpA family protein [Escherichia coli MS 146-1]
gi|307139326|ref|ZP_07498682.1| putative outer membrane lipoprotein [Escherichia coli H736]
gi|331643321|ref|ZP_08344452.1| YfiB [Escherichia coli H736]
gi|140651|sp|P07021|YFIB_ECOLI RecName: Full=Putative lipoprotein yfiB; Flags: Precursor
gi|1788957|gb|AAC75654.1| probable positive effector of YfiN activity, OM lipoprotein
[Escherichia coli str. K-12 substr. MG1655]
gi|1800010|dbj|BAA16490.1| predicted outer membrane lipoprotein [Escherichia coli str. K12
substr. W3110]
gi|169890044|gb|ACB03751.1| predicted outer membrane lipoprotein [Escherichia coli str. K-12
substr. DH10B]
gi|226839305|gb|EEH71326.1| outer membrane lipoprotein [Escherichia sp. 1_1_43]
gi|238862713|gb|ACR64711.1| predicted outer membrane lipoprotein [Escherichia coli BW2952]
gi|260448321|gb|ACX38743.1| OmpA/MotB domain protein [Escherichia coli DH1]
gi|300315824|gb|EFJ65608.1| OmpA family protein [Escherichia coli MS 175-1]
gi|300451527|gb|EFK15147.1| OmpA family protein [Escherichia coli MS 116-1]
gi|301077592|gb|EFK92398.1| OmpA family protein [Escherichia coli MS 146-1]
gi|309702985|emb|CBJ02316.1| outer membrane lipoprotein [Escherichia coli ETEC H10407]
gi|315137223|dbj|BAJ44382.1| putative outer membrane lipoprotein [Escherichia coli DH1]
gi|331036792|gb|EGI09016.1| YfiB [Escherichia coli H736]
Length = 160
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 63/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLVFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|330896311|gb|EGH28406.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 384
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + L + E + ++D+ + R D++ PV SF + L L +
Sbjct: 140 DPKVTQAWLGEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 199
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 200 TRLAKVVEGDQKTAVLILGHADTSGPTEANQKISQERAQSVAAIFRL-SGLERNRLSQRG 258
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P ND+ GR N+R+EI + P+ ++
Sbjct: 259 MGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 291
>gi|289624411|ref|ZP_06457365.1| ompA family protein [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289646675|ref|ZP_06478018.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 2250]
gi|330867435|gb|EGH02144.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330987431|gb|EGH85534.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 271
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + + + + + L+ + + L
Sbjct: 126 ASAQQQGRWLEDQILS--LATTETDRGLVMTLGDVLFDAGHAELKSSASRTILKVVQFLQ 183
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P V+ I+ +TDS G + NL +S++RA + ++ + I V G+ ++P++
Sbjct: 184 INPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVAD-VLMDLGVDEKRIHVEGYGQQFPVN 242
Query: 165 TNDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 243 ANASERGRAQNRRVEIV 259
>gi|296135687|ref|YP_003642929.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
gi|295795809|gb|ADG30599.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
Length = 298
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 61/158 (38%), Gaps = 7/158 (4%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEK 90
V K +K + ++ + V + I V F + L
Sbjct: 98 GGPGAKEVQKTLQGVAEKIQTLLASAIRKGDVRVRMTPLGVVIDIHDTVLFASGQAALTP 157
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGV 146
+ +L IA +L + I + TD+ +N +S RA + I++GV
Sbjct: 158 QAQDLLNQIAGVLQGV-AYPIQVNGFTDTTPIHTAQFPSNWALSAARAVSVVEMFIEQGV 216
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ ++ G+ +P+++NDT GR N+R+ + I
Sbjct: 217 KPEQLVAA-GYGQYHPVESNDTAKGRAANRRVSVVIVS 253
>gi|163747526|ref|ZP_02154876.1| OmpA family protein [Oceanibulbus indolifex HEL-45]
gi|161379204|gb|EDQ03623.1| OmpA family protein [Oceanibulbus indolifex HEL-45]
Length = 191
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 60/180 (33%), Gaps = 11/180 (6%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL-----DKAEDEFQMQLQDT 61
L+M T++ ++ + + K T + D AE
Sbjct: 15 LTMAAALTVASTSADAQTRSQQGRDKGVYTPTIWVDPDGCEHWVMDDGAEGYMTPHTTRQ 74
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
GI V R GD+ + + + +A + I HTDS
Sbjct: 75 GIPVCRRGDVCGVMEADQFFATDKYNISAQGRA---RLANFFQSTGAVSYIITGHTDSRA 131
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ +S RA+ + Q R VRG+ + P N++ N+R+EI
Sbjct: 132 SDAYNMRLSYNRANSVAHVANQ---VGARIADVRGYGERMPAVPNNSAANMAKNRRVEII 188
>gi|157158147|ref|YP_001463924.1| putative outer membrane lipoprotein [Escherichia coli E24377A]
gi|157162081|ref|YP_001459399.1| putative outer membrane lipoprotein [Escherichia coli HS]
gi|170019118|ref|YP_001724072.1| putative outer membrane lipoprotein [Escherichia coli ATCC 8739]
gi|188495277|ref|ZP_03002547.1| OmpA family protein [Escherichia coli 53638]
gi|194430167|ref|ZP_03062668.1| OmpA family protein [Escherichia coli B171]
gi|209920080|ref|YP_002294164.1| putative outer membrane lipoprotein [Escherichia coli SE11]
gi|218555184|ref|YP_002388097.1| putative outer membrane lipoprotein [Escherichia coli IAI1]
gi|218696229|ref|YP_002403896.1| putative outer membrane lipoprotein [Escherichia coli 55989]
gi|253772501|ref|YP_003035332.1| outer membrane lipoprotein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254162575|ref|YP_003045683.1| putative outer membrane lipoprotein [Escherichia coli B str.
REL606]
gi|260845286|ref|YP_003223064.1| putative outer membrane lipoprotein [Escherichia coli O103:H2 str.
12009]
gi|260856694|ref|YP_003230585.1| putative outer membrane lipoprotein [Escherichia coli O26:H11 str.
11368]
gi|261227488|ref|ZP_05941769.1| predicted outer membrane lipoprotein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255682|ref|ZP_05948215.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
FRIK966]
gi|291283877|ref|YP_003500695.1| OmpA family protein [Escherichia coli O55:H7 str. CB9615]
gi|293415876|ref|ZP_06658516.1| lipoprotein yfiB [Escherichia coli B185]
gi|293448955|ref|ZP_06663376.1| lipoprotein yfiB [Escherichia coli B088]
gi|297517107|ref|ZP_06935493.1| putative outer membrane lipoprotein [Escherichia coli OP50]
gi|300819922|ref|ZP_07100105.1| OmpA family protein [Escherichia coli MS 107-1]
gi|300825119|ref|ZP_07105212.1| OmpA family protein [Escherichia coli MS 119-7]
gi|300905075|ref|ZP_07122884.1| OmpA family protein [Escherichia coli MS 84-1]
gi|300921149|ref|ZP_07137528.1| OmpA family protein [Escherichia coli MS 115-1]
gi|300925597|ref|ZP_07141467.1| OmpA family protein [Escherichia coli MS 182-1]
gi|300930670|ref|ZP_07146056.1| OmpA family protein [Escherichia coli MS 187-1]
gi|301305750|ref|ZP_07211837.1| OmpA family protein [Escherichia coli MS 124-1]
gi|301326724|ref|ZP_07220038.1| OmpA family protein [Escherichia coli MS 78-1]
gi|307315083|ref|ZP_07594667.1| OmpA/MotB domain protein [Escherichia coli W]
gi|309794116|ref|ZP_07688540.1| OmpA family protein [Escherichia coli MS 145-7]
gi|331654062|ref|ZP_08355062.1| YfiB [Escherichia coli M718]
gi|331669355|ref|ZP_08370201.1| YfiB [Escherichia coli TA271]
gi|331678596|ref|ZP_08379270.1| YfiB [Escherichia coli H591]
gi|157067761|gb|ABV07016.1| OmpA family protein [Escherichia coli HS]
gi|157080177|gb|ABV19885.1| OmpA family protein [Escherichia coli E24377A]
gi|169754046|gb|ACA76745.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739]
gi|188490476|gb|EDU65579.1| OmpA family protein [Escherichia coli 53638]
gi|194411792|gb|EDX28113.1| OmpA family protein [Escherichia coli B171]
gi|209762578|gb|ACI79601.1| putative outer membrane protein [Escherichia coli]
gi|209762584|gb|ACI79604.1| putative outer membrane protein [Escherichia coli]
gi|209913339|dbj|BAG78413.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218352961|emb|CAU98761.1| putative outer membrane lipoprotein [Escherichia coli 55989]
gi|218361952|emb|CAQ99553.1| putative outer membrane lipoprotein [Escherichia coli IAI1]
gi|242378200|emb|CAQ32975.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)]
gi|253323545|gb|ACT28147.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253974476|gb|ACT40147.1| predicted outer membrane lipoprotein [Escherichia coli B str.
REL606]
gi|253978643|gb|ACT44313.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)]
gi|257755343|dbj|BAI26845.1| predicted outer membrane lipoprotein [Escherichia coli O26:H11 str.
11368]
gi|257760433|dbj|BAI31930.1| predicted outer membrane lipoprotein [Escherichia coli O103:H2 str.
12009]
gi|290763750|gb|ADD57711.1| OmpA family protein [Escherichia coli O55:H7 str. CB9615]
gi|291322045|gb|EFE61474.1| lipoprotein yfiB [Escherichia coli B088]
gi|291432065|gb|EFF05047.1| lipoprotein yfiB [Escherichia coli B185]
gi|300403026|gb|EFJ86564.1| OmpA family protein [Escherichia coli MS 84-1]
gi|300411899|gb|EFJ95209.1| OmpA family protein [Escherichia coli MS 115-1]
gi|300418292|gb|EFK01603.1| OmpA family protein [Escherichia coli MS 182-1]
gi|300461467|gb|EFK24960.1| OmpA family protein [Escherichia coli MS 187-1]
gi|300522391|gb|EFK43460.1| OmpA family protein [Escherichia coli MS 119-7]
gi|300527510|gb|EFK48572.1| OmpA family protein [Escherichia coli MS 107-1]
gi|300839004|gb|EFK66764.1| OmpA family protein [Escherichia coli MS 124-1]
gi|300846584|gb|EFK74344.1| OmpA family protein [Escherichia coli MS 78-1]
gi|306905512|gb|EFN36046.1| OmpA/MotB domain protein [Escherichia coli W]
gi|308122021|gb|EFO59283.1| OmpA family protein [Escherichia coli MS 145-7]
gi|315061919|gb|ADT76246.1| predicted outer membrane lipoprotein [Escherichia coli W]
gi|320198378|gb|EFW72980.1| Integral membrane protein YfiB [Escherichia coli EC4100B]
gi|320640787|gb|EFX10285.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
G5101]
gi|320646132|gb|EFX15077.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str.
493-89]
gi|320651429|gb|EFX19830.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str.
H 2687]
gi|320657034|gb|EFX24857.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320662698|gb|EFX30042.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str.
USDA 5905]
gi|320667515|gb|EFX34439.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
LSU-61]
gi|323156259|gb|EFZ42418.1| ompA family protein [Escherichia coli EPECa14]
gi|323173078|gb|EFZ58709.1| ompA family protein [Escherichia coli LT-68]
gi|323377501|gb|ADX49769.1| OmpA/MotB domain protein [Escherichia coli KO11]
gi|323960537|gb|EGB56166.1| OmpA family protein [Escherichia coli H489]
gi|323971452|gb|EGB66688.1| OmpA family protein [Escherichia coli TA007]
gi|324016591|gb|EGB85810.1| OmpA family protein [Escherichia coli MS 117-3]
gi|324120062|gb|EGC13938.1| OmpA family protein [Escherichia coli E1167]
gi|331047444|gb|EGI19521.1| YfiB [Escherichia coli M718]
gi|331063023|gb|EGI34936.1| YfiB [Escherichia coli TA271]
gi|331073426|gb|EGI44747.1| YfiB [Escherichia coli H591]
Length = 160
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 63/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|50956519|gb|AAT90766.1| conserved hypothetical protein [uncultured proteobacterium QS1]
Length = 372
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 49/106 (46%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L+ +L + +I I HTD+ G + NL IS RA ++
Sbjct: 257 SLFDAGSTELKPGSTKVLINALANIKAQSGWLIEIVGHTDTTGNAEQNLQISYARASAVR 316
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++ + G + V+G A PI +NDT GR N+R++I++ P
Sbjct: 317 DWMQRMGDIPSNCFVVQGAAGSQPITSNDTASGRAANRRVDIRLVP 362
>gi|212633286|ref|YP_002309811.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212554770|gb|ACJ27224.1| OmpA [Shewanella piezotolerans WP3]
Length = 201
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 8/179 (4%)
Query: 4 ELGLSMFIMTTISGCG---LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ + + GC S + +H ND D E E + +
Sbjct: 2 RTLIILLSFAILGGCSMRDTVSMDTPTKQVHDLNDIDHDGVIVARER-CTETELGATIDN 60
Query: 61 TGI-VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G + I + I + +++ + +++IAT + KFP+T I+ H
Sbjct: 61 YGCGKIKPINERQELKI---LFANDSYYIDPVYYTQVEIIATFMQKFPNTQAVIEGHCSK 117
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT ++N +SQ RA+ + + L +R + +S G+++ PID T + N+R+
Sbjct: 118 TGTHEHNQELSQNRANAVSALLSERFDIESSRLSAVGYSFDRPIDPTHTAAAHKVNRRV 176
>gi|71735961|ref|YP_274192.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556514|gb|AAZ35725.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 271
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + + + + + L+ + + L
Sbjct: 126 ASAQQQGRWLEDQILS--LATTETDRGLVMTLGDVLFDAGHAELKSSASRTILKVVQFLQ 183
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P V+ I+ +TDS G + NL +S++RA + ++ + I V G+ ++P++
Sbjct: 184 INPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVAD-VLMDLGVDEKRIHVEGYGQQFPVN 242
Query: 165 TNDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 243 ANASERGRAQNRRVEIV 259
>gi|320008837|gb|ADW03687.1| OmpA/MotB domain protein [Streptomyces flavogriseus ATCC 33331]
Length = 216
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 74/193 (38%), Gaps = 18/193 (9%)
Query: 4 ELGLSMFIMTTIS-----GCGLASREKKKVFLHKSNDTDIVNKRFGSSL--------DKA 50
+GL + G AS + + ++ V+ + D
Sbjct: 18 RIGLCAAAAVVLGTSTLWGATAASADDNPTAVPSASPPVEVDANSPGLMLGDGATLGDVR 77
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++D G R + L + + IA +
Sbjct: 78 VLDIKSIVEDMGGEERREDTNADITFALQAEVLFGKDSAKLSGEATARINAIALEIQTQK 137
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ + + TD++G+ + ++S++RA+ ++ L + + +RG+ +YPI +ND
Sbjct: 138 APKVRVFGFTDNLGSSAHGDVLSKQRANAVQGVLATK--LPSVTFEIRGYGEQYPIASND 195
Query: 168 TKVGRQNNQRIEI 180
T+ GR+ N+R+E+
Sbjct: 196 TEDGRKKNRRVEV 208
>gi|255263704|ref|ZP_05343046.1| OmpA domain protein [Thalassiobium sp. R2A62]
gi|255106039|gb|EET48713.1| OmpA domain protein [Thalassiobium sp. R2A62]
Length = 632
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 63/163 (38%), Gaps = 2/163 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ + ++ + + +D K ++
Sbjct: 439 TGNQGATAKISQLLSEKLGEAEDFRIDVKYVEQLDPIAALPSPEECIEQIQAATSNAKIT 498
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ + IA IL + ST I I +TDS G N +SQ+RA+ + +
Sbjct: 499 FEPGSANIDAGARSTVDQIAEILQRCTSTKIEIAGYTDSQGREVMNQQLSQQRAEAVLTA 558
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L R V ++ + G+ + PI N+T+ GR+ N+RIE ++
Sbjct: 559 LRARRVPTS-AFTAIGYGEESPIADNETEDGREANRRIEFKLI 600
>gi|313674495|ref|YP_004052491.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312941193|gb|ADR20383.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 672
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 58/138 (42%), Gaps = 2/138 (1%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+D + E ++ I +S + + + + + P L + +L
Sbjct: 536 IDLQQKENYQEITRD-IYLSPLSEGSFISLNNVYFAQGSYEILEASHPELDRLIRLLRSS 594
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ I I HT+ G+ + N ++SQ+RAD + I + + I +G+ P+
Sbjct: 595 ETMQIEIGGHTERRGSPRLNRILSQDRADAV-KAYIVQAGIDQKRIKTKGYGSSKPVTDG 653
Query: 167 DTKVGRQNNQRIEIQIFP 184
T++ R+ N+R+E I
Sbjct: 654 RTEIERRQNRRVEYTILS 671
>gi|197124092|ref|YP_002136043.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|196173941|gb|ACG74914.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
Length = 386
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 58/170 (34%), Gaps = 15/170 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + + V ++ D I
Sbjct: 232 GCPVMDADGDGVADPDDRCPGQAGVAADGCPRAYR------------LLEVGRDRIALRE 279
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
PV + L +L +A L P +A++ HTD G + +SQ RA+
Sbjct: 280 PVRFGARDD--LLPSSAVLLDELAQALRDHPRLRVAVEVHTDGAGEAAASKRLSQARAEA 337
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ + + +GF ++PI +N T GR N+R EI+I P G
Sbjct: 338 V-RAALAGRGIEAERVEAKGFGAEHPIASNKTARGRAQNRRTEIRILPGG 386
>gi|160885976|ref|ZP_02066979.1| hypothetical protein BACOVA_03981 [Bacteroides ovatus ATCC 8483]
gi|260170568|ref|ZP_05756980.1| OmpA family outer membrane protein [Bacteroides sp. D2]
gi|315918915|ref|ZP_07915155.1| outer membrane protein [Bacteroides sp. D2]
gi|156108789|gb|EDO10534.1| hypothetical protein BACOVA_03981 [Bacteroides ovatus ATCC 8483]
gi|313692790|gb|EFS29625.1| outer membrane protein [Bacteroides sp. D2]
Length = 238
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 14/190 (7%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI- 72
+ G + + G +DKA E + ++ + + +
Sbjct: 43 ILGGVIGKGKGAAIGAAIGTAVGAGTGALIGKKMDKAAAEAKQ-IEGAQVEQITDNNGLQ 101
Query: 73 --TCYIPVHVSFV-SEVFLEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL----- 123
+ F L L A LN+ ++I +TD+ G
Sbjct: 102 AVKVTFDSGILFTTGNANLSAAAKSALSKFANNVLNQNRDMDVSIYGYTDNQGWKNSTAA 161
Query: 124 ---KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL +SQERA + SYL+ GVS+N+ V+G P+ +NDT GR+ N+R+E+
Sbjct: 162 QSQQKNLNLSQERAQSVSSYLLSCGVSTNQIKGVQGMGESDPVASNDTAAGREQNRRVEV 221
Query: 181 QIFPRGNIKK 190
++ + K
Sbjct: 222 YMYASEQMIK 231
>gi|254302232|ref|ZP_04969590.1| outer membrane protein [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148322424|gb|EDK87674.1| outer membrane protein [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 196
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ ++ + I + F++ ++ ML + + K +
Sbjct: 40 NALEINKMEALKEEPPEEMTIVLDDRALNFDFDKSFVKPQYDEMLTNLKEFITKN-DYEV 98
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I HTD I + + N+ +S+ RA+ +K+ LI+ G+ +R + + P+ N T G
Sbjct: 99 TIVGHTDYIASNEYNMGLSKRRAEAVKAKLIELGLDPSRIVETVARGEEEPVADNSTTEG 158
Query: 172 RQNNQRIEIQIFPRG 186
R N+R+E ++ RG
Sbjct: 159 RAKNRRVEFKLVKRG 173
>gi|116049050|ref|YP_792148.1| hypothetical protein PA14_49900 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115584271|gb|ABJ10286.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 168
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 62/180 (34%), Gaps = 28/180 (15%)
Query: 5 LGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L L++F + ++GC + E LQ+ G
Sbjct: 12 LALALFSLVLGLAGCQTKPPQTG-----------------------LSAEQIAVLQEQGF 48
Query: 64 VVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ G + V F + L L IA L + ++ HTD+ G
Sbjct: 49 ELRDEGWE--FGMSSKVLFGNNLDRLNPDSRNTLTKIAHALLAVDIDKVRLEGHTDNYGD 106
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA+ + + + I VRG P+ N T+ GR N+R+ I +
Sbjct: 107 EGYNQKLSERRAESVAAVFREA-GMPAANIEVRGLGMSKPVADNKTRAGRSENRRVAIIV 165
>gi|82702444|ref|YP_412010.1| flagellar motor protein MotD [Nitrosospira multiformis ATCC 25196]
gi|82410509|gb|ABB74618.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
Length = 288
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 7/169 (4%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF- 82
+K + + + A F+ +++ + V + I V F
Sbjct: 88 KKARRLAEAQRGQQEAMEVIARDVVAAFQPFRSLIENGQVRVIPSSRGLAVEINAKVLFA 147
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIK 138
+ LE+ +L+ +A +L I ++ HTDSI +N +S RA +
Sbjct: 148 PGQAVLEQNSARVLEAVAQVLK-NNDYPIQVEGHTDSIPIVTDKFPSNWELSAVRASSVV 206
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
LI GV + R ++ G+ P+D+NDT+ GR N+R+ I I +
Sbjct: 207 RLLIGSGVEAAR-LTAVGYGENRPVDSNDTEDGRTRNRRVTIMILSNSD 254
>gi|16262781|ref|NP_435574.1| outer membrane protein [Sinorhizobium meliloti 1021]
gi|307315940|ref|ZP_07595434.1| Protein of unknown function DUF2092, periplasmic [Sinorhizobium
meliloti BL225C]
gi|14523413|gb|AAK64986.1| outer membrane protein [Sinorhizobium meliloti 1021]
gi|306898414|gb|EFN29107.1| Protein of unknown function DUF2092, periplasmic [Sinorhizobium
meliloti BL225C]
Length = 420
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
S D + + +Q + + + L+ P+L IAT
Sbjct: 51 SQSVADPVKQYSKESMQQALQTREQYD------VHGLSFDTGQSTLQPGAKPLLDDIATA 104
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
L FP + I HTD+ G+ ++N +S ERA+ IK+ L++RG+ + + ++ G P
Sbjct: 105 LKNFPDWSLRIVGHTDASGSAESNERLSLERANTIKAALVERGIDAGKLLAA-GAGQSRP 163
Query: 163 IDTNDTKVGRQNNQRIEI 180
I +N+T G+ N+R+E+
Sbjct: 164 IASNETDEGKALNRRVEL 181
>gi|78485244|ref|YP_391169.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78363530|gb|ABB41495.1| Tol system Pal protein [Thiomicrospira crunogena XCL-2]
Length = 205
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 74/204 (36%), Gaps = 24/204 (11%)
Query: 1 MIK-ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K +L +++ +++T++ C A ++ + ++ + + + E ++
Sbjct: 1 MNKLKLLVALGVVSTLAACTSAPKKGENADMNVEPVSQEEMDYAEKARLELEKANSGEVN 60
Query: 60 ----------DTGIVVSRIGDMITCYI------------PVHVSFVSEVFLEKKFLPMLQ 97
+ + + + PV + ++ L ++
Sbjct: 61 EVEVLGAGATGSDVSSESLASQDLNAMSQDVPALGQTFEPVIYFDYDQYIVDDTSLETVK 120
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
ATIL PS I + HTD GT + NL + ++RA + + I V
Sbjct: 121 HYATILIDNPSEKIQLVGHTDERGTPEYNLALGEKRAKAVAEAFML-YGVHKDRIEVISL 179
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQ 181
+ P+ + N+R+EI+
Sbjct: 180 GEELPVMEGHNEEAWAKNRRVEIK 203
>gi|86146494|ref|ZP_01064817.1| Peptidoglycan-associated lipoprotein [Vibrio sp. MED222]
gi|218709111|ref|YP_002416732.1| peptidoglycan-associated lipoprotein [Vibrio splendidus LGP32]
gi|85835757|gb|EAQ53892.1| Peptidoglycan-associated lipoprotein [Vibrio sp. MED222]
gi|218322130|emb|CAV18244.1| Peptidoglycan-associated lipoprotein precursor [Vibrio splendidus
LGP32]
Length = 180
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 60/181 (33%), Gaps = 7/181 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M ++ C ++ T+ GS + +
Sbjct: 6 VLKGLMIALPVM-AVTACSSTDE-----ATSATSGTESNQTTSGSEGNVDTTVVTPIDAN 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + + ML A L K + ++ H D
Sbjct: 60 GQLSEQELKEQALRETQTIYFAFDNSTIAGDYEEMLAAHAAYLVKNVDMNVTVEGHADER 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + YL IS+ + + P+ ++ N+R +
Sbjct: 120 GTPEYNIALGERRAQAVAKYLQAL-GVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAVL 178
Query: 181 Q 181
Sbjct: 179 V 179
>gi|182414999|ref|YP_001820065.1| OmpA/MotB domain-containing protein [Opitutus terrae PB90-1]
gi|177842213|gb|ACB76465.1| OmpA/MotB domain protein [Opitutus terrae PB90-1]
Length = 197
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 60/185 (32%), Gaps = 10/185 (5%)
Query: 2 IKEL-GLSMFIMTTISGCGLASREKKKVFLH--KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L L++ +GC + + + + +D + + +
Sbjct: 5 LKKLCVLAVGAAVLFAGCSKKPKRPDPSATVLGPTAGGTVNPLDVNAPVDASAAGLEQRD 64
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + + I + +++ LQ A + + P I ++ H D
Sbjct: 65 PN----IIEDANSIRGMFEPVYFDFDKSDIKQAERAKLQKAADYMKQHPEQRILLEGHCD 120
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + NL + RA+ K YL + I N ++R+
Sbjct: 121 WRGTAEYNLGLGDRRANAAKRYLSSL--APAERIETLSKGSLD-AAQNGDDAAMAKDRRV 177
Query: 179 EIQIF 183
+I I
Sbjct: 178 DIVIL 182
>gi|118581755|ref|YP_903005.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118504465|gb|ABL00948.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 266
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 9/155 (5%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQL 98
+ G++ +K + ++ +V+S + +T + + F V ++ + +L
Sbjct: 113 TSQLGTTYEKLLQNLKSEIAQGQVVISELKGALTVTMEAAILFDSGRVDVKPEGQLILFK 172
Query: 99 IATILNKFPSTVIAIQSHTDSIGT-------LKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ L I ++ HTD++ +N +S RA + YL ++
Sbjct: 173 LVETLKANRDRAIRVEGHTDNLAPSGALSRLFPSNWELSGARAVNVARYLQRQ-GVDPSL 231
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S P+ N T+ GR N+RIEI + R
Sbjct: 232 LSAVACGEYRPVADNATREGRARNRRIEITLVARD 266
>gi|326773950|ref|ZP_08233232.1| hypothetical protein HMPREF0059_02356 [Actinomyces viscosus C505]
gi|326636089|gb|EGE36993.1| hypothetical protein HMPREF0059_02356 [Actinomyces viscosus C505]
Length = 569
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 2/164 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
++++ K + D E + D G IT +
Sbjct: 213 AGSAKKAKIDLSIAQAALKQSSHDVPELADPVAIERYTRALDDSTSTQAGGKDITVTLAS 272
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
V+F L L +A+ L ++P + I HTD + N +S++RA+
Sbjct: 273 DVTFASDSADLAPGAEAQLNTVASQLGQYPDGGTLTIVGHTDDVQDDAYNQTLSEKRANA 332
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+K+ L Q SV G P + T R N+R+EI
Sbjct: 333 VKTRLAQLTKLDKWQTSVSGKGESEPKIKDTTDEARAANRRVEI 376
>gi|120553254|ref|YP_957605.1| flagellar motor protein MotB [Marinobacter aquaeolei VT8]
gi|120323103|gb|ABM17418.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 305
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 10/172 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLD----KAEDEFQMQLQDTGIVVSRIGDMITCY 75
+ + ++ KS + + + +D + + + + D I VS I
Sbjct: 93 TTTDVQPEIQTLKSPEEKAIEETIQEQMDANMARILEVLEPAILDGRINVSEDQRRIIIR 152
Query: 76 IPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLIS 130
I SF L +F +L +A +L P +AI+ HTD++ N +S
Sbjct: 153 IEEKGSFASGSAQLTWEFEGLLMDMAEVLADMPG-DLAIEGHTDNVPIRTERFYSNWDLS 211
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + + L+ R + I V G A P N + R N+R+EI I
Sbjct: 212 AARAAAVANVLLAREQVTPDRIRVTGLADTEPRVPNTSPENRAKNRRVEIVI 263
>gi|330980720|gb|EGH78823.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 271
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + + + + + L+ + + L
Sbjct: 126 ASAQQQGRWLEDQILS--LATTETDRGLVMTLGDVLFDAGHAELKNSASRTILKVVQFLQ 183
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P V+ I+ +TDS G ++NL +S++RA + L+ GV R I V G+ ++P++
Sbjct: 184 INPRRVVRIEGYTDSTGDRQDNLKLSKDRAQAVADVLMDLGVDEKR-IHVEGYGQEFPVN 242
Query: 165 TNDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 243 ANTSERGRAQNRRVEIV 259
>gi|326800681|ref|YP_004318500.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326551445|gb|ADZ79830.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 650
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ + RI + + + L L + +L I I HTD+ G+
Sbjct: 525 VGLERISSGRSAILNNIFFPTNGYELLPTSESDLMELFQLLQHNKHIRIEITGHTDNTGS 584
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ N ++S++RA + +YL+ + ++ +G+ PI N T+ G+Q N+R E +I
Sbjct: 585 AQANQVLSEKRALAVYAYLLSK-GIDKTRLAYKGYGQNNPIADNTTEKGKQQNRRTEFKI 643
Query: 183 F 183
Sbjct: 644 I 644
>gi|146310897|ref|YP_001175971.1| peptidoglycan-associated outer membrane lipoprotein [Enterobacter
sp. 638]
gi|145317773|gb|ABP59920.1| OmpA domain protein [Enterobacter sp. 638]
Length = 173
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 59/181 (32%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C GS + Q
Sbjct: 6 VLKGLMIALPVM-AIAACSSNKNASNDQSGEGMMGAGTGMDANGS------GNMSSEEQA 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + I + + + F ML A L PS + ++ H D
Sbjct: 59 RLQMQQLQQNNIV------YFDLDKFDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 113 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVL 171
Query: 181 Q 181
Sbjct: 172 V 172
>gi|237730722|ref|ZP_04561203.1| peptidoglycan-associated outer membrane lipoprotein [Citrobacter
sp. 30_2]
gi|226906261|gb|EEH92179.1| peptidoglycan-associated outer membrane lipoprotein [Citrobacter
sp. 30_2]
Length = 180
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 59/181 (32%), Gaps = 15/181 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C ++ ++ E Q
Sbjct: 14 VLKGLMIALPVM-AIAACSSNKNASNDGSEGMLGAGTGMDANGSGNMSSEEQARLQMQQL 72
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + F ML A L PS + ++ H D
Sbjct: 73 QQNNI-------------VYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 120 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 178
Query: 181 Q 181
Sbjct: 179 V 179
>gi|320531900|ref|ZP_08032811.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
gi|320135891|gb|EFW27928.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
Length = 332
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 2/128 (1%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFP-STVIAIQSH 116
D + T + V+F ++ L + +L + + K+P + I H
Sbjct: 27 ADDSSDTKQDEKSTTVTVAGDVTFATDSDQLSAQADSVLASVVEQIKKYPSGGDLTITGH 86
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD + +N +S+ RA + L + S SV G P NDT RQ N+
Sbjct: 87 TDDVADDAHNQDLSERRAKAVSERLKKLTDLSTWKESVSGKGESSPRVPNDTDERRQINR 146
Query: 177 RIEIQIFP 184
R+EI + P
Sbjct: 147 RVEITLTP 154
>gi|114706797|ref|ZP_01439697.1| outer membrane lipoprotein [Fulvimarina pelagi HTCC2506]
gi|114537745|gb|EAU40869.1| outer membrane lipoprotein [Fulvimarina pelagi HTCC2506]
Length = 176
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 18/181 (9%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L + ++GC + + + +
Sbjct: 10 RLAILALAGLMVAGCAN---------RQDALPDNAAGLGLSGAGMNGVGGAGGPPGSSQE 60
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+GD I + LQ A LN++P I ++ H+D GT
Sbjct: 61 FTVSVGDRI-------FFETDSSAITADAQQTLQRQAQWLNQYPQYQITVEGHSDERGTR 113
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ NL + RA + YL Q GV++ R ++ + + P+ D N+R + +
Sbjct: 114 EYNLALGARRAAATRDYLAQLGVNAGRMRTIS-YGKERPVAVCDNISCWSQNRRA-VTVL 171
Query: 184 P 184
Sbjct: 172 S 172
>gi|317407354|gb|EFV87320.1| OmpA-family protein [Achromobacter xylosoxidans C54]
Length = 332
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
D ++V + +++ + + V ++ I + F + L L
Sbjct: 144 DGEVVAQAAPPLKAPSKESLGLADLGNSVDVIINEQSVSFRISNELLFPSGQATLSPSGL 203
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSN 149
+++ +A ILNK ++++ H+D + +N +S RA + L++ GV+ +
Sbjct: 204 DVIKRLAAILNKN-DYQVSVEGHSDPVPIQTRQFASNWELSSSRATSVLRELVRDGVAGS 262
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
R + G+A PI++NDT GR N+R+E+
Sbjct: 263 R-LRAVGYAETRPIESNDTPAGRAANRRVELI 293
>gi|311696643|gb|ADP99516.1| flagellar motor protein MotB [marine bacterium HP15]
Length = 277
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 58/160 (36%), Gaps = 6/160 (3%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV 86
+ + + E + ++ + V+ + + +F E
Sbjct: 99 DERAEGVAPTQIPGGVIDLASRMIRELESEVASEALSVNYDQNQVVIRFSEEATFRSGEA 158
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLI 142
++ + +P+++ + +L+ + + +TD ++N +S RA + L+
Sbjct: 159 AIKPEMIPIIERVVNVLSACTG-DVLVSGYTDDRPISSDRYRSNWDLSAARAVSVVHELV 217
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G A P+ ND+ R N+R+EI I
Sbjct: 218 MNRQVPADRVVAAGRAETNPLAPNDSPENRALNRRVEIAI 257
>gi|160874266|ref|YP_001553582.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|160859788|gb|ABX48322.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|315266500|gb|ADT93353.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 369
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 50/109 (45%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++K F ++ +A LNK P + I H ++G + N+++S +RA
Sbjct: 252 DVGSIQFANDSAVVKKVFYKDIERLANYLNKNPEFTVEIAGHASNVGKPEYNMVLSDKRA 311
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
D + L+++ S ++ G+ P+ D+K N+RIE +
Sbjct: 312 DAVAQILVEKYGISQSRVTSNGYGVTQPLVAGDSKEAYAANRRIEAIVT 360
>gi|90416365|ref|ZP_01224297.1| OmpA domain protein [marine gamma proteobacterium HTCC2207]
gi|90332090|gb|EAS47304.1| OmpA domain protein [marine gamma proteobacterium HTCC2207]
Length = 324
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
IT + V F ++ + + L IA + + ++ HTDS G + N+ +S
Sbjct: 207 ITVRLNVEFEF-NKDTVLAVYGDQLDAIAAAMKAQDDIDLVLEGHTDSRGADQYNMSLSD 265
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
RA +K+ L++ IS G+ PI TN+T GR N+R+
Sbjct: 266 RRAKAVKAKLVEDYGIPAARISAVGYGETQPIATNETDEGRARNRRV 312
>gi|85703482|ref|ZP_01034586.1| OmpA domain protein [Roseovarius sp. 217]
gi|85672410|gb|EAQ27267.1| OmpA domain protein [Roseovarius sp. 217]
Length = 635
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 59/160 (36%), Gaps = 2/160 (1%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFV 83
K +D + S+D + + + +
Sbjct: 442 KSASAEIAQFLSDKLGGAEKYSIDVTYKKALDPVAGLPTPDECEAQIAEIQSTRKINFEP 501
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
++ + ++ IA IL + I HTDS G + N +S RA + L
Sbjct: 502 GSATIDAQGAAIMDDIADILKDCGEIPMVIGGHTDSQGREEMNEQLSLARARAVLDELRL 561
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R V ++ I +G+ PI N+T+ GR+ N+RIE ++
Sbjct: 562 RRVLTSS-IDAKGYGESTPIADNETEAGRETNRRIEFRLI 600
>gi|299532464|ref|ZP_07045855.1| OmpA/MotB [Comamonas testosteroni S44]
gi|298719549|gb|EFI60515.1| OmpA/MotB [Comamonas testosteroni S44]
Length = 214
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 61/209 (29%), Gaps = 27/209 (12%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKS------------------------N 34
M K ++ + ++ G + +
Sbjct: 1 MKKLNKVAMLFASAALVTAAGAQVKAADGGKTIDNWQNGTSELVWKNGTNELCWRDANWT 60
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
G+ + + + Y + L+
Sbjct: 61 PATAAVDCDGALKAQVAAPAPAVVPPAPVAPQPAVASKVTYSADAFFDFDKSVLKPAGKA 120
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L + + VI HTDS+G+ N +S RA+ +K+YL+ + +
Sbjct: 121 KLDDLTGKIKDINLEVIIAVGHTDSVGSDAYNQKLSVRRAEAVKAYLVSK-GIEKSRVYT 179
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
G K P+ N T GR N+R+EI++
Sbjct: 180 EGKGEKQPVADNKTAAGRAQNRRVEIEVV 208
>gi|325981317|ref|YP_004293719.1| peptidoglycan-associated lipoprotein [Nitrosomonas sp. AL212]
gi|325530836|gb|ADZ25557.1| peptidoglycan-associated lipoprotein [Nitrosomonas sp. AL212]
Length = 174
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 66/181 (36%), Gaps = 12/181 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+++L L + ++ +S C + + L G+ D + +
Sbjct: 1 MRKL-LCIALIVLLSACASQTTQPDVDDLSSGA---------GNGNDLSGSDLMGSDSGR 50
Query: 62 GIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
S++ D ++ ++ ++ A L P+ + +Q +TD
Sbjct: 51 PSYFSQLNDPNSILSQRSVFYDFDSYTVKSEYRELVLSHARFLRDNPAASVILQGNTDDR 110
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ + NL + Q RAD +K+ +I G + SV + P + N+R +I
Sbjct: 111 GSREYNLALGQRRADSVKNMMILSGAQDLQIESVS-LGEEKPRALGHGESTWSQNRRTDI 169
Query: 181 Q 181
Sbjct: 170 L 170
>gi|225012476|ref|ZP_03702912.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
gi|225003453|gb|EEG41427.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
Length = 322
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 2/161 (1%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ + D DK +E + + + + + F
Sbjct: 161 NQAGPIENKGCPLPDGDGDGVPDKEDKCPNEAGDKGNNGCPTIPKEFTEFIKSNQNKILF 220
Query: 83 V-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
S L+K L+ + +LN + +T I I+ HT + G+ N +S++RA IK YL
Sbjct: 221 KASSSVLDKGGRATLEKVKMLLNTYQNTAIIIEGHTSTDGSASYNQKLSEQRASAIKDYL 280
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I + + ++R IS G+ PI N T GR ++R +I+I
Sbjct: 281 ISQTIDASR-ISTIGYGENQPIGDNKTVKGRAESRRAKIKI 320
>gi|259417312|ref|ZP_05741231.1| OmpA/MotB domain protein [Silicibacter sp. TrichCH4B]
gi|259346218|gb|EEW58032.1| OmpA/MotB domain protein [Silicibacter sp. TrichCH4B]
Length = 519
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLI 99
+ L++ + +L+ I + R D + + + F S L ++
Sbjct: 370 APPSTQLERLSAALESELETGQIELDRTNDWVLIRVSEALRFRSGSEDLTSDIDSLIASA 429
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ----RGVSSNRFISVR 155
A LN I + HTDS+ S E+ ++ + + + I+V
Sbjct: 430 AKALNAEQG-PIRVVGHTDSVPMSGRGRFKSNEQLSKARAQTVADLLAAQLEAPDRITVE 488
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
G PI N T+ GR N+R+EI + PR N
Sbjct: 489 GKGPVDPIADNGTREGRARNRRVEI-LIPREN 519
>gi|237746664|ref|ZP_04577144.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes
HOxBLS]
gi|229378015|gb|EEO28106.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes
HOxBLS]
Length = 167
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 64/178 (35%), Gaps = 14/178 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + + ++ CG + + + + N + + +
Sbjct: 1 MVVMVAGALVLTACGSSVKLDETAPIEDRNVSSSSADS------------RQVGTVDAVS 48
Query: 65 VSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ D ++ ++ P++ A LN + + IQ +TD G
Sbjct: 49 TDPLNDPNGELAQKSVYFDFDSYVVKGEYQPVVDAHARYLNGHRNRTVVIQGNTDERGGS 108
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ NL + Q+RA+ ++ + GV ++ +V F + P T + + N+R +I
Sbjct: 109 EYNLALGQKRAEAVRKAMALMGVPDSQMEAVS-FGKEKPRATGNNEAAWAENRRADIV 165
>gi|160897524|ref|YP_001563106.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
gi|160363108|gb|ABX34721.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
Length = 174
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 11/177 (6%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L + + ++ CG + + H SS Q
Sbjct: 6 RLCTIVLLAAGLAACGSTATTSTQRSEHHYAFGKAPAPAPASSGVAPVVATTQADQRGPA 65
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + + +++ A L P + ++ HTD G +
Sbjct: 66 NV----------AHIVYFDFDAYTIRNSDRAIVESHAQWLRSNPGRSVMLRGHTDRRGGI 115
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL + Q+RAD +++ L GV+ R SV + + D ++ Q N+R+E
Sbjct: 116 EYNLALGQKRADAVRNSLQLLGVNPARVESVS-YGKERLADEGTSEEAHQRNRRVEF 171
>gi|255305748|ref|ZP_05349920.1| putative chemotaxis protein [Clostridium difficile ATCC 43255]
Length = 246
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 56/141 (39%), Gaps = 6/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
++ + + + + + + F + ++ + I +LN+
Sbjct: 93 EEIQKYLNENGMANSVSLRVQDRGLVISLKDTILFDTGKAIVKDNSRDKIIQIGKMLNEM 152
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
S + ++ HTD++ K+N +S RA + LI + +S G+ P
Sbjct: 153 NSY-MRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDKLSAVGYGEFRP 211
Query: 163 IDTNDTKVGRQNNQRIEIQIF 183
I N ++ GR N+R++I +
Sbjct: 212 IAENSSEEGRSKNRRVDIVLV 232
>gi|260062810|ref|YP_003195890.1| putative flagellar motor protein MotB [Robiginitalea biformata
HTCC2501]
gi|88784378|gb|EAR15548.1| putative flagellar motor protein MotB [Robiginitalea biformata
HTCC2501]
Length = 287
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 5/133 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L D I +S ++ I + F + +L +A ++N P ++ H
Sbjct: 136 LDDEDIEISVEKGVVFVSISDKLLFSSGSYNVTNAAKNVLGKVAQVVNNKPDFEFMVEGH 195
Query: 117 TDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD++ +N +S +RA + L ++ G +Y P+ +NDT R
Sbjct: 196 TDNVPYRSGVLLDNWDLSAKRATSVVRILQNDFGVDPARMTAAGRSYYVPLASNDTAANR 255
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 256 AKNRRTRIVVLPK 268
>gi|149188853|ref|ZP_01867143.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1]
gi|148837273|gb|EDL54220.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1]
Length = 217
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 70/215 (32%), Gaps = 29/215 (13%)
Query: 2 IKELGLSMFIMTTI-------SG------CGLASREKKKVFLHKSNDT---------DIV 39
+K+L + +M+ + +G C E + + I
Sbjct: 1 MKKLVIGALVMSMLPYSLAASAGEGQSIYCDNTFNEFQHSVTVGNITGIAQHRKGFLQIE 60
Query: 40 NKRFGSSLDKA-EDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLP 94
K S L K + + L +G + V + L
Sbjct: 61 QKSDDSDLKKLLAGKSSLALSQSGCTTWIGDEHGKAKQGGLVARLHFGFDQANLTPMGDE 120
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L +A L K ++ I I HTDS G N + +RA LI + I V
Sbjct: 121 ALNRLADTLGK-QASNITIDGHTDSTGPEGYNQALGLKRALTTSDGLISK-GVDKNHIVV 178
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
R F PI TN T GR N+R EI + +K
Sbjct: 179 RSFGETKPIATNSTTEGRAQNRRSEIWVSSGSTVK 213
>gi|256820527|ref|YP_003141806.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256582110|gb|ACU93245.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 660
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 6/142 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D + + + + I + + L I ++ ++P
Sbjct: 519 DAYAEVLLSPIVEKKPIKIGDDLSKELKIDNIYFDYDKANIRPDAAEQLAKIVKVMEEYP 578
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DT 165
+ I ++ HTDS G+ NL +SQ RA +LI I+ +G+ + +
Sbjct: 579 TMKIDVRLHTDSRGSDSYNLALSQRRAKSTIKWLIA-HGIHKDRITGKGYGETQLVNGCS 637
Query: 166 ND---TKVGRQNNQRIEIQIFP 184
N T+ Q N+R E I
Sbjct: 638 NGVPCTEEQHQANRRSEFIIIS 659
>gi|158522220|ref|YP_001530090.1| peptidoglycan-associated lipoprotein [Desulfococcus oleovorans
Hxd3]
gi|158511046|gb|ABW68013.1| Peptidoglycan-associated lipoprotein [Desulfococcus oleovorans
Hxd3]
Length = 181
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 58/181 (32%), Gaps = 3/181 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
K L + ++ I G K+ ++ + + + + E + +
Sbjct: 3 KKRLFVMFVMLFAICGLLFTVSCAKQSVKSEATELETESSLAADEASQMAAEEMAEAEAI 62
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + L +L+ AT L + ++ H D G
Sbjct: 63 AAEKAAARHAFVN--ENIHFDFDKSTLTPAAREILRTKATWLRDNSDAAVVVEGHCDERG 120
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
T + NL + RA K +L+ S +S + + P+D + N+R +
Sbjct: 121 TTEYNLALGDRRAKAAKDFLVD-MGISASRLSTISYGEERPLDPRSNETAWAKNRRAQFV 179
Query: 182 I 182
+
Sbjct: 180 L 180
>gi|24113943|ref|NP_708453.1| putative outer membrane lipoprotein [Shigella flexneri 2a str. 301]
gi|30064004|ref|NP_838175.1| putative outer membrane lipoprotein [Shigella flexneri 2a str.
2457T]
gi|74313195|ref|YP_311614.1| putative outer membrane lipoprotein [Shigella sonnei Ss046]
gi|82545149|ref|YP_409096.1| outer membrane lipoprotein [Shigella boydii Sb227]
gi|218706106|ref|YP_002413625.1| putative outer membrane lipoprotein [Escherichia coli UMN026]
gi|293406112|ref|ZP_06650038.1| outer membrane lipoprotein [Escherichia coli FVEC1412]
gi|293411994|ref|ZP_06654717.1| outer membrane lipoprotein [Escherichia coli B354]
gi|298381845|ref|ZP_06991442.1| outer membrane lipoprotein [Escherichia coli FVEC1302]
gi|300900209|ref|ZP_07118397.1| OmpA family protein [Escherichia coli MS 198-1]
gi|331684261|ref|ZP_08384853.1| YfiB [Escherichia coli H299]
gi|24053050|gb|AAN44160.1| putative outer membrane protein [Shigella flexneri 2a str. 301]
gi|30042260|gb|AAP17985.1| putative outer membrane protein [Shigella flexneri 2a str. 2457T]
gi|73856672|gb|AAZ89379.1| putative outer membrane protein [Shigella sonnei Ss046]
gi|81246560|gb|ABB67268.1| putative outer membrane protein [Shigella boydii Sb227]
gi|218433203|emb|CAR14101.1| putative outer membrane lipoprotein [Escherichia coli UMN026]
gi|291426118|gb|EFE99150.1| outer membrane lipoprotein [Escherichia coli FVEC1412]
gi|291468765|gb|EFF11256.1| outer membrane lipoprotein [Escherichia coli B354]
gi|298276985|gb|EFI18501.1| outer membrane lipoprotein [Escherichia coli FVEC1302]
gi|300356266|gb|EFJ72136.1| OmpA family protein [Escherichia coli MS 198-1]
gi|313648283|gb|EFS12727.1| ompA family protein [Shigella flexneri 2a str. 2457T]
gi|331077876|gb|EGI49082.1| YfiB [Escherichia coli H299]
gi|333000977|gb|EGK20547.1| ompA family protein [Shigella flexneri K-272]
Length = 160
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 63/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEGLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|15645739|ref|NP_207916.1| peptidoglycan associated lipoprotein precursor (omp18)
[Helicobacter pylori 26695]
gi|2314278|gb|AAD08169.1| peptidoglycan associated lipoprotein precursor (omp18)
[Helicobacter pylori 26695]
Length = 179
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 60/184 (32%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + + +GC K + + +K E + +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCAQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLM 178
>gi|300693692|ref|YP_003749665.1| outer membrane protein; ompa/motb domain [Ralstonia solanacearum
PSI07]
gi|299075729|emb|CBJ35033.1| putative outer membrane protein; OmpA/MotB domain [Ralstonia
solanacearum PSI07]
Length = 280
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 63/160 (39%), Gaps = 3/160 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--S 81
+ +V +H + ++ S + + ++ + +
Sbjct: 119 DGTQVAMHGDVQNEAQRQQLASDMATTLGASYTIKNGLRVAAVSEQSLLDQTLANRIIEF 178
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L K +L +A +L + I I HTD+ G+ NL +SQ RA+ +K+YL
Sbjct: 179 ETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHTDNSGSRAMNLNLSQTRAETVKNYL 238
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I + + ++ G P+ N T GR N+RIE +
Sbjct: 239 ISK-GAEPGTLTAIGVGPDQPVAANTTDEGRSRNRRIEFR 277
>gi|316935074|ref|YP_004110056.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315602788|gb|ADU45323.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
Length = 446
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
++K P+L +A + + P+ I + +TD+ G NL +S+
Sbjct: 337 VASAEKINFERRSAVIDKASQPLLGKLAAAIKQCPAVTIEVAGYTDAAGKKSTNLALSKR 396
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ + + + + + + G+ PI +NDT GR N+RIE +
Sbjct: 397 RAEAVVA-SLTKAGIGSVKLVAEGYGSAKPIASNDTAEGRAQNRRIEFVV 445
>gi|56461082|ref|YP_156363.1| OprF [Idiomarina loihiensis L2TR]
gi|56180092|gb|AAV82814.1| Outer membrane porin [Idiomarina loihiensis L2TR]
Length = 363
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 62/161 (38%), Gaps = 1/161 (0%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ +S D S DK + + D + + IT + V
Sbjct: 194 PEPQQAAPEPESKPVDSDGDGVVDSKDKCANTPKNYSVDETGCILYENETITEELLVE-F 252
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
++ + ++ +A + + P I I HTDS G K N +S+ RA+ + + L
Sbjct: 253 DLNSSNIRSGERSDIKDMAEFMKEHPQLDITIHGHTDSTGEAKYNQWLSERRAEAVANAL 312
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+++ + +G P ++ RQ N+RIE +
Sbjct: 313 VKQHGIEKSRVDFKGHGESQPKVRENSAADRQENRRIEATL 353
>gi|315223627|ref|ZP_07865481.1| immunogenic peptidoglycan-associated lipoprotein PG4
[Capnocytophaga ochracea F0287]
gi|314946408|gb|EFS98403.1| immunogenic peptidoglycan-associated lipoprotein PG4
[Capnocytophaga ochracea F0287]
Length = 660
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 6/142 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D + + + + I + + L I ++ ++P
Sbjct: 519 DAYAEVLLSPIVEKKPIKIGDDLSKELKIDNIYFDYDKANIRPDAAEQLAKIVKVMEEYP 578
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DT 165
+ I ++ HTDS G+ NL +SQ RA +LI I+ +G+ + +
Sbjct: 579 TMKIDVRLHTDSRGSDSYNLALSQRRAKSTIKWLIA-HGIHKDRITGKGYGETQLVNGCS 637
Query: 166 ND---TKVGRQNNQRIEIQIFP 184
N T+ Q N+R E I
Sbjct: 638 NGVPCTEEQHQANRRSEFIIIS 659
>gi|302187430|ref|ZP_07264103.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
Length = 271
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + + + + + L+ + + L
Sbjct: 126 ASAQQQGRWLEDQILS--LATTETDRGLVMTLGDVLFDAGHAELKNSASRTILKVVQFLQ 183
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P V+ I+ +TDS G + NL +S++RA + ++ + I V G+ ++P++
Sbjct: 184 INPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVAD-VLMDLGVDEKRIHVEGYGQEFPVN 242
Query: 165 TNDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 243 ANTSERGRAQNRRVEIV 259
>gi|282858415|ref|ZP_06267595.1| OmpA family protein [Prevotella bivia JCVIHMP010]
gi|282588863|gb|EFB93988.1| OmpA family protein [Prevotella bivia JCVIHMP010]
Length = 287
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + ++ + ++ + + + L IA I++ + + I+ +TD++
Sbjct: 136 VDVQVLKGVVYISLADNMLYKSGSYEINDRAEQTLSKIAKIISDYNDYDVLIEGNTDNVP 195
Query: 122 TL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+NN +S RA + YL + + + I+ G P+ N+T++GR
Sbjct: 196 INTANKMMTNIRNNWDLSALRATSVAKYLQEHFGVNPKRITAGGRGEYNPLVANNTELGR 255
Query: 173 QNNQRIEIQIFPR 185
Q N+R +I I P+
Sbjct: 256 QRNRRTQIIITPK 268
>gi|163800823|ref|ZP_02194723.1| putative outer membrane protein [Vibrio sp. AND4]
gi|159175172|gb|EDP59969.1| putative outer membrane protein [Vibrio sp. AND4]
Length = 212
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 78/199 (39%), Gaps = 12/199 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF--QMQLQ 59
+K + + +F+ IS C ++ + ++ +T N+ D + +
Sbjct: 1 MKIIPI-LFMGGLISACSVSHSNRATGDEYEYMETPNANQIADLIDDDNDGVINARDLCP 59
Query: 60 DTGIVVSRIGDMITCYIPVH-------VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+T + D Y + ++ F + ++ L ++P+T I
Sbjct: 60 ETPVGSEIDNDGCGKYSESSQQMQIRILFANDSSRIDPVFAGQISELSDFLKEYPTTSIE 119
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
++ +T GT + NL +S+ RA+ ++ L+ + + + GF P + +
Sbjct: 120 LKGYTSITGTNEYNLALSKRRAESVRQELVNN-GIAPERLEIVGFGENNPASQGTDETSQ 178
Query: 173 QNNQRIEIQIFP-RGNIKK 190
N+R+ + +G I+K
Sbjct: 179 ALNRRVTASVIGYKGEIEK 197
>gi|332666433|ref|YP_004449221.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332335247|gb|AEE52348.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 958
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 2/124 (1%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + I +I + I + + + L A + + I IQ
Sbjct: 831 EDDIPTKNIKQFKIDENPDASIRDVLFATGSYEILPEAHTYLIQWAKFIQRNK-LKIEIQ 889
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ + + N ++S+ RA ++ +LI+ + +S RGF P +N T+ GR
Sbjct: 890 GHTDNTSSTEFNQVLSENRAQAVRQFLIENNCIAEN-LSTRGFGESKPEASNATEEGRAK 948
Query: 175 NQRI 178
N+R+
Sbjct: 949 NRRV 952
>gi|300723438|ref|YP_003712743.1| hypothetical protein XNC1_2522 [Xenorhabdus nematophila ATCC 19061]
gi|297629960|emb|CBJ90580.1| Conserved hypothetical protein with OmpA/MotB domains (probable
component of SST VI cluster) [Xenorhabdus nematophila
ATCC 19061]
Length = 406
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 60/140 (42%), Gaps = 5/140 (3%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFP 107
K + + +++ + V+ + D + F S ++ ++ +++ IA LN
Sbjct: 259 KLQSLLKDEIEAGLLTVTDMSDRSIIVLKGDGLFKSSAIQIKSRYSAIIKHIAEALNSLQ 318
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR----GVSSNRFISVRGFAYKYPI 163
++ + + + + + +S + ++ +QR ++ +S G + PI
Sbjct: 319 GNILVVGYTDNIPVSSRRSHFLSNYALSLARAKSVQRELQRYLNQPERVSAEGKGAENPI 378
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
NDT+ R N+R+EI +
Sbjct: 379 APNDTRSNRAKNRRVEITLL 398
>gi|260061787|ref|YP_003194867.1| outer membrane protein-like peptidoglycan-associated (lipo)protein
[Robiginitalea biformata HTCC2501]
gi|88785919|gb|EAR17088.1| Outer membrane protein-like peptidoglycan-associated (lipo)protein
[Robiginitalea biformata HTCC2501]
Length = 453
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 47/108 (43%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ L+ + + +++ I+ +L + + I HTDS G N+ +SQ R
Sbjct: 344 ISTNAILFDSGSANLQPRSMGVIRQISQVLQQDGGMSLQIVGHTDSDGDADANVALSQAR 403
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
A+ +K L+ +S G P+ N++ G+ N+R+E
Sbjct: 404 AEAVKKALVDVYGVDAGRLSTLGKGESEPVSDNNSPAGKAQNRRVEFI 451
>gi|213156444|ref|YP_002318864.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057]
gi|213055604|gb|ACJ40506.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057]
Length = 255
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 3/131 (2%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ QL I D + I L + +L +A LNK +
Sbjct: 128 QLFSQLSVNQAEQKIIDDALKNRIIE--FESGSAVLTEAGQKILDEMAVALNKVGREKVK 185
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTDS G NL +SQ+RA +K+YLI + +S G P+ N + GR
Sbjct: 186 IVGHTDSSGDATKNLKLSQDRALAVKNYLISK-NIPADHLSTEGLGSSKPVADNTSAEGR 244
Query: 173 QNNQRIEIQIF 183
+ N+RIE +
Sbjct: 245 KKNRRIEFTVL 255
>gi|157889021|dbj|BAF80966.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ IG T + H F + + +F +Q + IL + P ++ HTDS
Sbjct: 205 KGALLDHIGCEKTIALEGHFGF-DQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDST 263
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ N +S ERA + +++ + I +G+ ++ P +NDTK GR N+R+E
Sbjct: 264 GSKTYNQKLSLERAKAVAKE-LEKTGVAKEKIVTKGYGFEKPKASNDTKEGRAQNRRVE 321
>gi|104780481|ref|YP_606979.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
gi|95109468|emb|CAK14169.1| putative outer membrane protein, OmpA family [Pseudomonas
entomophila L48]
Length = 322
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 3/166 (1%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
++ + I K + LD+ E + + ++ + + + R D++ IPV S+
Sbjct: 73 SEEKKPAAAAVPKIDQKATQAWLDQYEPKVREAIKGSKLELERREDVLAVTIPVDSSYNP 132
Query: 85 E--VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ L L + +A ++ T + I H DS G N +S ERA + +
Sbjct: 133 DRPNMLLPITLGPITQVAKVIETDTKTAVLILGHADSSGATAANQKLSLERAASVSAIFR 192
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
G+ +R + ++G P ND+ GR N+R+E+ + P+ +
Sbjct: 193 LSGLQRDRLM-LKGMGSVMPRAANDSAEGRALNRRVEMLLTPQNTM 237
>gi|297538888|ref|YP_003674657.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
gi|297258235|gb|ADI30080.1| OmpA/MotB domain protein [Methylotenera sp. 301]
Length = 272
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 7/146 (4%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
++ + D + V + I I + F L +L IA ++
Sbjct: 116 LSNKLSPLINDGKVRVMQNNRGIRIDINDSLLFTPGSAELAAAASTVLSEIAPMIKDN-D 174
Query: 109 TVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+I ++ HTD+I + N +S RA + L GV+ +R +S GF PI
Sbjct: 175 RLIQVEGHTDNIAIHNDLFYSNWELSAVRASSVVRMLSDTGVAESR-LSALGFGSTQPIT 233
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNIKK 190
N+T++GR N+R+ I I +K
Sbjct: 234 ENNTELGRAKNRRVSIMILYESPNQK 259
>gi|189220464|ref|YP_001941104.1| Outer membrane protein or related peptidoglycan-associated
(lipo)protein [Methylacidiphilum infernorum V4]
gi|189187322|gb|ACD84507.1| Outer membrane protein or related peptidoglycan-associated
(lipo)protein [Methylacidiphilum infernorum V4]
Length = 179
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 57/191 (29%), Gaps = 30/191 (15%)
Query: 1 MIKELGLSMF------------IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD 48
M K L L++ ++ +GC + K++ +
Sbjct: 1 MKKNLYLTVISAPQPFLVFLFVLIIAAAGCAKHPKGKERPTPEEETL------------- 47
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
E D V + ++ IA +N+ P
Sbjct: 48 ----ESSPLPSRGEFNPDFDVDYSPLKDQVIYFAFDSAAIPGSERGKIEKIADWMNQHPQ 103
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I + H D GT + N + + RA ++ YLI S I + PI T
Sbjct: 104 LSILLAGHCDERGTEEYNRGLGERRAIAVREYLIGL-GISAEKIHTISYGKDRPIAIGHT 162
Query: 169 KVGRQNNQRIE 179
+ N+R+E
Sbjct: 163 EADYAKNRRVE 173
>gi|90023231|ref|YP_529058.1| HAD family hydrolase [Saccharophagus degradans 2-40]
gi|89952831|gb|ABD82846.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 380
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
C K + D+D +++ G V + ++ +
Sbjct: 208 ACPNTPAGVKVNAKGCALDSDQDGVADHKD-SCPNTAMHLKVDAKGCPVQLS-ESVSIDL 265
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V+ + ++ ++ ++ +A + ++ ++V+ I+ HTD+ G N +SQ+RAD
Sbjct: 266 KVN-FDSNSSVVKPEYFAEIRKVADFMAQYENSVVVIEGHTDTRGAAAYNKSLSQKRADA 324
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + L+ + R ++ G+ + PI T+ G N+R+ ++
Sbjct: 325 VAAVLVSEMNVAKRRVTSVGYGEEQPIADESTREGLVANRRVVAKV 370
>gi|33596991|ref|NP_884634.1| putative lipoprotein [Bordetella parapertussis 12822]
gi|33566442|emb|CAE37695.1| putative lipoprotein [Bordetella parapertussis]
Length = 200
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 68/179 (37%), Gaps = 13/179 (7%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGD 70
S +A K + T + K S D + Q+ G+ V + D
Sbjct: 20 SSGSMAQEPPYKSTILGLQATILDLKGLPSDTDGDISDLSAQVGALAARHEGVSVRQGKD 79
Query: 71 MITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+T + V F + + P LQ IA ++ + ++AI+ HTDS G+ N +
Sbjct: 80 AVTIAMMGDVLFDFDKADILAAAEPTLQDIAKLIKSPATGIVAIEGHTDSKGSDSYNKGL 139
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQI 182
S RA + + +SVRG P+ N D GR N+R+E +
Sbjct: 140 SLRRAQAVAQ-WLGAHGVDAAKLSVRGLGAARPVQPNQLANGADNPQGRAQNRRVEFVL 197
>gi|218929795|ref|YP_002347670.1| putative OmpA family protein [Yersinia pestis CO92]
gi|115348406|emb|CAL21342.1| putative OmpA family protein [Yersinia pestis CO92]
Length = 261
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 71/185 (38%), Gaps = 9/185 (4%)
Query: 5 LGLSMFIMTTISGCG--LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
L I+ T GC L+ E + + +V + + + ++
Sbjct: 77 LLCGFLIVATFIGCKYFLSVPESDLLKRMGALQRVVVTPPVAAPKLRLSILLKDEIAKQL 136
Query: 63 IVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + + V + + + +++ +A +++ I I HTDS+
Sbjct: 137 VSVDETSNNSKVIFKGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGA-ILIVGHTDSMP 195
Query: 122 TLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
K N ++S++RA + Y+ ++ I G P+ +ND GR N+R
Sbjct: 196 INKPGFPNNQVLSEKRAANVARYM-EQAGIPTDKIRFEGKGETQPVSSNDDATGRSQNRR 254
Query: 178 IEIQI 182
+EI +
Sbjct: 255 VEIFV 259
>gi|149277299|ref|ZP_01883441.1| OmpA/MotB [Pedobacter sp. BAL39]
gi|149232176|gb|EDM37553.1| OmpA/MotB [Pedobacter sp. BAL39]
Length = 464
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 4/159 (2%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
S E K D +K G+ A D L V+ +
Sbjct: 306 KSVEDLKKDTDGDGVADQFDKCPGTPAGTAVDGSGCPLPKMETAVA--DNSNLTGFETVQ 363
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ + P L ++++L + + + + S GT N+ +S++RA+ +
Sbjct: 364 FEFNSSVLKTESYPTLDKLSSVLRENGG-KVTLHGYASSEGTAAYNVKLSKDRANSV-KT 421
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ ++ + +G PI +NDT+ GR N+R+E
Sbjct: 422 YLVNSGVNSSAVVTKGHGEANPIASNDTEEGRIQNRRVE 460
>gi|332140499|ref|YP_004426237.1| Thrombospondin type 3 repeat:OmpA/MotB [Alteromonas macleodii str.
'Deep ecotype']
gi|327550521|gb|AEA97239.1| Thrombospondin type 3 repeat:OmpA/MotB [Alteromonas macleodii str.
'Deep ecotype']
Length = 218
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAI 113
+ + + + I V++ F S + ++ LQ + LN P++ + I
Sbjct: 83 AKEPEPSAADFTLDDAQIIDSFKVNIEFTSNSTDVLPEYENNLQDVIDALNANPNSGVII 142
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
H G N +S+ RA + S L+ + + R I+ G+ P+ +++
Sbjct: 143 HGHASLDGDAAYNQRLSERRAKAVASLLMTKADIAPRRITAVGYGESRPLVNEESEAANA 202
Query: 174 NNQRIEIQIF 183
N+RIE I
Sbjct: 203 RNRRIEAAII 212
>gi|317491882|ref|ZP_07950317.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920316|gb|EFV41640.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 163
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 59/175 (33%), Gaps = 28/175 (16%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ + ++GC E L++ G +
Sbjct: 14 IILAVLFLAGCQHKGG--------------------------LTAEQIAVLKEQGFHQTD 47
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G M + ++ L + ++ + L + + TD+ G N
Sbjct: 48 EGWMFGLS-EKVLFGNNKSNLTPESTETVKKMGKTLAQINILHARLDGFTDNYGDESYNQ 106
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S +RA+ + + +G ++ RG +PI +N TK GR N+R+ I I
Sbjct: 107 QLSLKRANTVAD-ALSQGGIPRMNLTTRGMGESHPIASNSTKQGRSENRRVAIVI 160
>gi|150025962|ref|YP_001296788.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
JIP02/86]
gi|149772503|emb|CAL43986.1| Probable outer membrane protein, OmpA family [Flavobacterium
psychrophilum JIP02/86]
Length = 710
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+GC + V + + + + +L D +
Sbjct: 557 AGCPWPDTDGDSVLDKDDKCPTVKGTIKNNGCPEVTADVMKKLNDYAKTI---------- 606
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ VS+ +++ P+LQ I IL ++P +I+ HTDS G N +S+ RA
Sbjct: 607 ----LFEVSKSSFQQRTFPVLQSILAILKEYPVAKFSIEGHTDSDGKDTANQTLSETRAA 662
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +YL++ G+ ++R ++ +GF PI TN TKVG+ N+R+E+++
Sbjct: 663 AVMAYLVKNGIDASR-LASKGFGESKPIATNKTKVGKILNRRVEVKLVN 710
>gi|28897835|ref|NP_797440.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus RIMD
2210633]
gi|153838023|ref|ZP_01990690.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
AQ3810]
gi|260361766|ref|ZP_05774791.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
K5030]
gi|260876995|ref|ZP_05889350.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
AN-5034]
gi|260899066|ref|ZP_05907507.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
Peru-466]
gi|260900753|ref|ZP_05909148.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
AQ4037]
gi|28806048|dbj|BAC59324.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus RIMD
2210633]
gi|149748557|gb|EDM59416.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
AQ3810]
gi|308089146|gb|EFO38841.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
Peru-466]
gi|308093872|gb|EFO43567.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
AN-5034]
gi|308110189|gb|EFO47729.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
AQ4037]
gi|308113254|gb|EFO50794.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
K5030]
gi|328473192|gb|EGF44040.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
10329]
Length = 174
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 71/181 (39%), Gaps = 13/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M ++ C + + +N+ + +D++ + +L++
Sbjct: 6 VLKGLLIALPVM-AMTACSSSD-DAASNTGAATNNNAAAETTVATPIDQSGQLTEQELKE 63
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + ML A+ L+K P+ + I+ H D
Sbjct: 64 QALRETQT----------IYFAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADER 113
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + +YL IS+ + + P+ + N+R +
Sbjct: 114 GTPEYNIALGERRAQAVANYLQAL-GVQADQISIVSYGEEKPLLLGQSDEVYAKNRRAVL 172
Query: 181 Q 181
Sbjct: 173 V 173
>gi|85713659|ref|ZP_01044649.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
gi|85699563|gb|EAQ37430.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
Length = 463
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 5/168 (2%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-- 76
S + L+ I G E + ++ ++ + V
Sbjct: 295 SDRSVDLSGDALYDPAGRQIRAGLPGDLPRGWEAKLEVSVKPSAGPVDPTVCQQLLSDLL 354
Query: 77 --PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ L+ + +L + + P+ I I HTD G N +S+ RA
Sbjct: 355 EKRTVQFETGKATLDPDSIGLLDQLTETALRCPTATIEIVGHTDGDGDASFNQALSERRA 414
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +++ + G+ PI TNDT G+ N+RI+ +
Sbjct: 415 QAVVDFMV-KAGLPANRFRPIGYGSAQPIATNDTDEGKAKNRRIDFIV 461
>gi|326336238|ref|ZP_08202410.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691747|gb|EGD33714.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 278
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L D I + ++ I + F + + +L +A ++N P ++ H
Sbjct: 128 LDDQDITIQVDKGVVYVSISDKMLFSSGSYNVTPRAREVLGKVAKVVNNKPDFEFMVEGH 187
Query: 117 TDSIGTLKNN----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD++ N +S RA + L + ++ G + P+ TN + GR
Sbjct: 188 TDNVPIKNNCIKDNWDLSVLRATAVVRILQNDFGVTPARMTAAGRSEYVPVTTNASADGR 247
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 248 ALNRRTRIVVLPK 260
>gi|78186499|ref|YP_374542.1| peptidoglycan-associated lipoprotein [Chlorobium luteolum DSM 273]
gi|78166401|gb|ABB23499.1| peptidoglycan-associated lipoprotein [Chlorobium luteolum DSM 273]
Length = 171
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 64/184 (34%), Gaps = 16/184 (8%)
Query: 1 MIKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + L++ +M T +GC N S+ AE +
Sbjct: 1 MKKSVYGFLALALMFT-AGCSSK------------NAVAPSGADEASAPAPAEASAPVSS 47
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+G + T + L LQ A+ +N + I+ H D
Sbjct: 48 VASGPSGYGFDEYQTGPLGDVFYEFDSSELAADAQTQLQQNASWMNSNAAASTMIEGHCD 107
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N+ + + RA K Y+++ GV S+R +V + + P + N+R
Sbjct: 108 ERGTSEYNIALGERRASTAKEYIVRLGVPSSRIETVS-YGEEKPFAAGHDEAAWSKNRRA 166
Query: 179 EIQI 182
+
Sbjct: 167 HFIL 170
>gi|37676733|ref|NP_937129.1| putative protein F-related protein [Vibrio vulnificus YJ016]
gi|37201276|dbj|BAC97099.1| putative protein F-related protein [Vibrio vulnificus YJ016]
Length = 193
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 71/191 (37%), Gaps = 17/191 (8%)
Query: 9 MFIMTTISGCGL----------ASREKKKVFLHK----SNDTDIVNKRFGSSLDKAEDEF 54
MF +SGC A + +++ + D
Sbjct: 1 MFACVLLSGCANLIVPPNMLDVAPKTNEELVYPEWGGEEVSPPPPQMMQAQKPQVQSDSL 60
Query: 55 QMQLQDTGIVVSRI-GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
Q LQ I + GD I ++ + F + + L+ LN+ I
Sbjct: 61 QSFLQRNAIQYQILPGDHIMIHLTETIHFKTGSAEVSPVSARWIGLLGNYLNQRSDVDIV 120
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I H DS GT N +S+ RA+ +K L+ V +R + RG+ P +N + GR
Sbjct: 121 IDGHADSTGTTGFNNSLSERRAEEVKKQLLMSRVPESRVYT-RGYGEYLPACSNTSINGR 179
Query: 173 QNNQRIEIQIF 183
+ N+R+E+ +
Sbjct: 180 KCNRRVELMLI 190
>gi|86137204|ref|ZP_01055782.1| OmpA domain protein [Roseobacter sp. MED193]
gi|85826528|gb|EAQ46725.1| OmpA domain protein [Roseobacter sp. MED193]
Length = 329
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 11/164 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+++ +T + A D + L+ G VV + V
Sbjct: 177 GPQRQPQLALAPAETPSAGSPPVQKSNPASD-LKDLLEQQGHVV----------LDGVVF 225
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L + + L+ +A + + + I HTDS+G L++N +S RA ++K L
Sbjct: 226 ETGAETLSPEAITSLRGLAGFMEEQSKAQVLIVGHTDSVGGLEDNTSLSLRRAQMVKDAL 285
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + IS+ G Y PI +N T GR+ N+R+E+ + R
Sbjct: 286 VSALGVAEGRISIAGAGYMAPIASNLTAAGREKNRRVEVVLLAR 329
>gi|332668363|ref|YP_004451151.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332337177|gb|AEE54278.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 312
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPS 108
+ + L D + V ++ + + F + K +L IA IL P
Sbjct: 157 LKGVLKEGLDDKDVDVKVDKTVVFVNLSDKMLFQSGSATMTTKANEVLGKIAQILKSRPD 216
Query: 109 TVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ ++ +TD+ +++N +S +RA + L + + G +
Sbjct: 217 LEVMVEGYTDNKPIKTACIEDNWDLSVKRATAVARTLQKTHGVDPNRLIAAGRGEYNALA 276
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
TNDT+ GR N+R I I P+
Sbjct: 277 TNDTEEGRSTNRRTRIIILPK 297
>gi|84685242|ref|ZP_01013141.1| OmpA domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84666974|gb|EAQ13445.1| OmpA domain protein [Rhodobacterales bacterium HTCC2654]
Length = 797
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T V +E + IA +L + I HTDS G+ + N +SQ+
Sbjct: 491 TIAGSKITFAPGSVEIEASAAATIDKIADVLRDCAEVPMEIGGHTDSQGSEELNKALSQQ 550
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
RA+ + + L+ R + ++ + G+ + PI NDT+ GR+ N+RIE ++ + +
Sbjct: 551 RANSVLNALLARRILTSNIV-AHGYGEEVPIADNDTEAGREANRRIEFRLISQREL 605
>gi|325067558|ref|ZP_08126231.1| OmpA/MotB domain protein [Actinomyces oris K20]
Length = 394
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 2/128 (1%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFP-STVIAIQSH 116
D + T + V+F ++ L + +L + + KFP + I H
Sbjct: 90 ADGASDTKQDEKSTTVTVAGDVTFATDSDQLSDQADGVLANVVEQIKKFPSGGDLTITGH 149
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD + +N +S+ RA + L + S SV G P ND+ RQ N+
Sbjct: 150 TDDVADDAHNQDLSERRAKAVSERLKKLTDLSKWKESVSGKGESSPRVPNDSDEHRQANR 209
Query: 177 RIEIQIFP 184
R+EI + P
Sbjct: 210 RVEITLMP 217
>gi|260777706|ref|ZP_05886599.1| protein F-related protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260605719|gb|EEX32004.1| protein F-related protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 205
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 59/151 (39%), Gaps = 3/151 (1%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSFV-SEVFLEKKF 92
+ V G + + Q L G+ + G+ I + + F ++
Sbjct: 52 ASSGVKGPMGQMRTTSYSDLQSFLLKNGVDYEVLPGNHIMVKLTDTIKFNTGSSMVKPDS 111
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+ L ++ L P I I H DS G N +S +RA +K L+ V+ N I
Sbjct: 112 MYWLDMMGRYLATQPGIDIVIDGHADSTGAPTFNDSLSMKRAKAVKKQLVSNNVAMNS-I 170
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RG+ P +N T G+ N+R+E+
Sbjct: 171 YTRGYGEYVPACSNTTSAGKACNRRVEVLFI 201
>gi|284040044|ref|YP_003389974.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283819337|gb|ADB41175.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 668
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 2/135 (1%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ +++ R T + + + + L + TIL P+
Sbjct: 533 LTKAQTDTTFNVALLLDRATLNKTFVLENIYYDLDKFNIRPDAAEELDKLVTILKDNPTL 592
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-T 168
I + SHTD N+ +SQ RA Y++ +GV ++R I +G+ I N T
Sbjct: 593 KIELSSHTDVRAPDAYNMRLSQNRAKSAVDYIVSKGVDASRMI-AKGYGETQLIVKNAKT 651
Query: 169 KVGRQNNQRIEIQIF 183
+ Q N+R E +I
Sbjct: 652 EEEHQRNRRTEFKIL 666
>gi|226330927|ref|ZP_03806445.1| hypothetical protein PROPEN_04850 [Proteus penneri ATCC 35198]
gi|225201722|gb|EEG84076.1| hypothetical protein PROPEN_04850 [Proteus penneri ATCC 35198]
Length = 175
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 23/177 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ K L L++ ++ ++ C + TD N AE+ + QL+
Sbjct: 17 VFKGLMLALPLV-AVAACSSNKNDD---------QTDTNNVPVVEQGPTAEELARQQLEQ 66
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + +L A L PS I ++ H D
Sbjct: 67 ------------LKQQNIVYFGFDKYDISSDYANLLDAHAAFLRANPSVRITVEGHADER 114
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + + RA+ + +Q S +S+ + + P + N+R
Sbjct: 115 GTPEYNIALGERRANAV-KMYLQGKGVSAEQLSIVSYGKEKPAVLGHDEAAYAKNRR 170
>gi|222081943|ref|YP_002541308.1| OmpA/MotB domain protein [Agrobacterium radiobacter K84]
gi|221726622|gb|ACM29711.1| OmpA/MotB domain protein [Agrobacterium radiobacter K84]
Length = 494
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 56/156 (35%), Gaps = 1/156 (0%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+ D+ G AE + +
Sbjct: 339 NGAVKSIQDSFAAAIPEGFKATPAEIAVSAPAAAVDAPNCQSLLNTILTKSKINFDTGKA 398
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ +L I + + P + + HTDS G N+ +S++RA + +YL GV
Sbjct: 399 RISPASSGVLDTIVATIGRCPGNAVEVSGHTDSSGDEAANVALSEQRAKAVVTYLTDAGV 458
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++R ++ G P+ +NDT G+ N+RIE +
Sbjct: 459 PASR-LTAVGLGSSRPVASNDTDEGKALNRRIEFSV 493
>gi|254467376|ref|ZP_05080787.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
gi|206688284|gb|EDZ48766.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
Length = 634
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + IA IL + + IQ HTDS G N +SQ RA + +
Sbjct: 499 FEPGSATIAADSAGTMDRIAEILGRCGPVRLEIQGHTDSQGREAMNQNLSQARAQSVLNE 558
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L R V ++ + +G+ PI NDT+ GR+ N+RIE ++
Sbjct: 559 LRARRVVTS-TFAAKGYGESTPIAGNDTEEGREANRRIEFKLI 600
>gi|167467398|ref|ZP_02332102.1| possible OmpA/MotB family protein [Yersinia pestis FV-1]
Length = 263
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 71/185 (38%), Gaps = 9/185 (4%)
Query: 5 LGLSMFIMTTISGCG--LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
L I+ T GC L+ E + + +V + + + ++
Sbjct: 79 LLCGFLIVATFIGCKYFLSVPESDLLKRMGALQRVVVTPPVAAPKLRLSILLKDEIAKQL 138
Query: 63 IVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + + V + + + +++ +A +++ I I HTDS+
Sbjct: 139 VSVDETSNNSKVIFKGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGA-ILIVGHTDSMP 197
Query: 122 TLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
K N ++S++RA + Y+ ++ I G P+ +ND GR N+R
Sbjct: 198 INKPGFPNNQVLSEKRAANVARYM-EQAGIPTDKIRFEGKGETQPVSSNDDATGRSQNRR 256
Query: 178 IEIQI 182
+EI +
Sbjct: 257 VEIFV 261
>gi|194337185|ref|YP_002018979.1| peptidoglycan-associated lipoprotein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309662|gb|ACF44362.1| peptidoglycan-associated lipoprotein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 173
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 57/183 (31%), Gaps = 12/183 (6%)
Query: 1 MIKEL-GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K++ G+ + + +GC S + + SS +
Sbjct: 1 MTKKINGIIVLALMVTAGCSSKS-----AVTPDAGSAGSGSASLPSSSSPSLPLLPSSPS 55
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G + G + L + L + I+ H D
Sbjct: 56 GYGFDQWQTGP-----LGDVFFDYDSATLSAEAQEQLHQNGVWMGSNARKGALIEGHCDE 110
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + RA K YL++ GV+ +R +V + + P + N+R
Sbjct: 111 RGTSEYNLALGDRRAISAKEYLVRFGVAPSRLETVS-YGEERPFAAGSNEESWAKNRRAH 169
Query: 180 IQI 182
+
Sbjct: 170 FVV 172
>gi|157148115|ref|YP_001455434.1| putative outer membrane lipoprotein [Citrobacter koseri ATCC
BAA-895]
gi|157085320|gb|ABV14998.1| hypothetical protein CKO_03925 [Citrobacter koseri ATCC BAA-895]
Length = 160
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 64/183 (34%), Gaps = 27/183 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K L + I ++GC R K E ++
Sbjct: 1 MLKRLFSPIILIALILAGCQTPQR-------------------------KFTPEQVAAMK 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + ++ +A+ L + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDNILFDKNDYKLRPESQQQIREMASRLAATGLKHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ + ++ +G K+P+ +N + GR N+R+
Sbjct: 95 YGEDSYNEALSLKRANVVADAWAEGANIPRSNLTTQGLGKKHPVASNQSAKGRAENRRVA 154
Query: 180 IQI 182
+ I
Sbjct: 155 VVI 157
>gi|330815667|ref|YP_004359372.1| OmpA domain protein [Burkholderia gladioli BSR3]
gi|327368060|gb|AEA59416.1| OmpA domain protein [Burkholderia gladioli BSR3]
Length = 171
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 67/185 (36%), Gaps = 21/185 (11%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+ L L++ +++ ++ C + K +N + + D A
Sbjct: 1 MMTNKARLALAVMMISALAACKSGVKLDDK-----ANQQGNALQTQPNPTDVA------- 48
Query: 58 LQDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V + D + ++ +L A L P+ I IQ +
Sbjct: 49 ----QVNVDPLNDPNSPLAKRSIYFDFDSYSVSDQYQSLLAQHAQYLKSHPARHILIQGN 104
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD GT + NL + Q+RA+ ++ L GV ++ SV + P + N+
Sbjct: 105 TDERGTSEYNLALGQKRAEAVRRGLSLLGVPDSQMESVS-LGKEKPQALGHDEASWAQNR 163
Query: 177 RIEIQ 181
R +I
Sbjct: 164 RADIV 168
>gi|170725100|ref|YP_001759126.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169810447|gb|ACA85031.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 497
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 53/134 (39%), Gaps = 6/134 (4%)
Query: 55 QMQLQDTGIVVSRIG------DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ QL D + + G + + + + + +++++A+ L P
Sbjct: 359 ETQLIDDRVAIDLEGLTDKMAETGHVALDGLLFEFDSDKMLPEAKAVVKVVASYLKSHPK 418
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ HTD G N L+S +RA + L ++ +G P+ N
Sbjct: 419 QRFYVIGHTDDQGKQSYNQLLSDKRAKAVVKQLTTAHQIPKDQLTGKGVGEYSPVANNSN 478
Query: 169 KVGRQNNQRIEIQI 182
+ G++ N+R+E+ +
Sbjct: 479 EAGQKLNRRVELVL 492
>gi|149191044|ref|ZP_01869304.1| putative outer membrane protein [Vibrio shilonii AK1]
gi|148835072|gb|EDL52049.1| putative outer membrane protein [Vibrio shilonii AK1]
Length = 207
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 68/198 (34%), Gaps = 10/198 (5%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K +L L + + K ++ +
Sbjct: 1 MKLQTKLLLCGLVSLPLFASATTPENDKYDYIATPLADQKADLIDDDGDGVINARDLCIA 60
Query: 59 QDTGIVVSRIGDMITCYIPV-----HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
G + G + + + +++ F + +A L ++P T I I
Sbjct: 61 TPEGAALDNDGCEQYVDVSNTMALRILFDNASTYIKPVFQTQISQMADFLKEYPDTTIEI 120
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
Q + +G + NL++S+ RA+ + I + +++ G+ P + DT+
Sbjct: 121 QGYASVVGNPEKNLVLSKNRAE-VVREAIINNGIAPERLTIVGYGDTQPEELGDTEFAHA 179
Query: 174 NNQRIEIQIFP-RGNIKK 190
N+++ + +G ++K
Sbjct: 180 MNRKVVASVVGYKGEVEK 197
>gi|313677015|ref|YP_004055011.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312943713|gb|ADR22903.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 670
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 6/170 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC---- 74
+ ++ + + D + + G + + I VS + D
Sbjct: 496 SDPQTGEFELVVTEGGDYGVSTSKKGYLFNSINFRLPDFSEYQEIDVSILLDEAEVGTKM 555
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ L + L L++I +L P + I HTD++G N L+S++RA
Sbjct: 556 VLKNIFFDTGSSDLRTESLGELKVIKDLLTNSPDLRVQINGHTDNVGNSVYNKLLSKKRA 615
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV-GRQNNQRIEIQIF 183
+ YLI ++ + +GF + P+ +ND ++ GR+ N+R EI+I
Sbjct: 616 QSVVDYLIAN-GINSERLEAKGFGEEKPLVSNDDEIGGREINRRTEIEIL 664
>gi|319952716|ref|YP_004163983.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319421376|gb|ADV48485.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 337
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
T + D I + L+ ++ I T+LN+ S ++I+ HTD
Sbjct: 214 APTASEMKSDIDKTGKAILNINFDTDKATLKPDGETLVAEIFTLLNENDSLKLSIEGHTD 273
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S G ++ N +S +RA+ + L +G++ NR ++ +GF K PI ND++ + N+R+
Sbjct: 274 SSGNVERNKQLSMDRANTVLYTLAGKGIAINR-LTAKGFGAKNPISPNDSEENKAKNRRV 332
Query: 179 EIQ 181
E+
Sbjct: 333 ELV 335
>gi|315181920|gb|ADT88833.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218]
Length = 316
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/104 (35%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L L+ +A LNK P I I HTDS G+ N +S RA
Sbjct: 210 DALSFDSSSLNATQQQALRTLAATLNKQPQAQILIIGHTDSTGSDAYNTKLSTRRAQAAA 269
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L++ V+ +R I V G PIDTN T GR +N+R+E+QI
Sbjct: 270 DVLMENQVAEHR-IKVFGEGQTRPIDTNTTPAGRAHNRRVEVQI 312
>gi|260779147|ref|ZP_05888039.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605311|gb|EEX31606.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
coralliilyticus ATCC BAA-450]
Length = 179
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 64/181 (35%), Gaps = 8/181 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ + ++ C + ++T+ + +D ++
Sbjct: 6 VLKGLLIALPV-LAVTACSSSD----DAANASGSETNQSTSGSANGVDT--TVVSPIGEN 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + + ML A L+K P+ + I+ H D
Sbjct: 59 GQLSEQELKEQALRESQTIYFAFDNATIAGDYEEMLAAHAAYLSKNPALKVTIEGHADER 118
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + YL IS+ + + P+ ++ N+R +
Sbjct: 119 GTPEYNIALGERRATAVAKYLQAL-GVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAVL 177
Query: 181 Q 181
Sbjct: 178 V 178
>gi|237747505|ref|ZP_04577985.1| outer membrane protein A [Oxalobacter formigenes HOxBLS]
gi|229378856|gb|EEO28947.1| outer membrane protein A [Oxalobacter formigenes HOxBLS]
Length = 207
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ + L + L+ + VI HTD IGT N +S+ RA+ +
Sbjct: 96 DAFFDFDKSIVKPEGKAKLDELVNALSGLDTEVIVAVGHTDWIGTDAYNQKLSERRANAV 155
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ +GV + + + G K PI N T+ GR N+R+E+++
Sbjct: 156 KAYLVSKGVPAEKIFT-EGKGKKQPIADNKTRQGRAKNRRVEVEVV 200
>gi|239995972|ref|ZP_04716496.1| peptidoglycan-associated lipoprotein [Alteromonas macleodii ATCC
27126]
Length = 188
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 71/180 (39%), Gaps = 6/180 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREK---KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
++K +++ ++T ++ C E+ + + + + + E +
Sbjct: 6 VMKSFIIALPVVTMMA-CSSGPSEEELAAERNRLAQEQAAAEAEAREAEAQRVKAEAAQR 64
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
++ +V + + + ++ +F +L A L K PST + I+ HT
Sbjct: 65 MKRQEEMVQQEMEALK-NEQTVYFDFDRSSIKPEFQRILDKHAAFLVKNPSTKVTIEGHT 123
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
DS GT + N+ + + RA + + S+ ++V + + P T+ N+R
Sbjct: 124 DSRGTPEYNIALGERRAQSV-ETYLLNAGVSSSQVTVVSYGEEKPAVMGSTEYAFAQNRR 182
>gi|84514795|ref|ZP_01002158.1| flagellar MotB protein [Loktanella vestfoldensis SKA53]
gi|84510954|gb|EAQ07408.1| flagellar MotB protein [Loktanella vestfoldensis SKA53]
Length = 411
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 70/179 (39%), Gaps = 11/179 (6%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ----MQLQDTGIVVSRIG 69
IS R++++ ++ R +AE + + ++ + V +
Sbjct: 230 LISMVSEIQRQQQESGGATLDEALSQMARATEKALEAEAQLRANLQDEIDQGLVTVEQRD 289
Query: 70 DMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----L 123
+ + +F L + ++ +A + P++ + + HTD++
Sbjct: 290 GKVFVNLGAGGAFPSGSADLTLQARGIIDELAA-VTVDPTSKVVVSGHTDNVPISFGALY 348
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++N ++ RA + + + R +S F P+ N T GR+ N+RIE++I
Sbjct: 349 RDNWDLAAARAASVVQEIEASIPAPGREMSAISFGETKPVADNATAEGRERNRRIELEI 407
>gi|319793582|ref|YP_004155222.1| type IV / vi secretion system protein, dotu family [Variovorax
paradoxus EPS]
gi|315596045|gb|ADU37111.1| type IV / VI secretion system protein, DotU family [Variovorax
paradoxus EPS]
Length = 456
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 11/182 (6%)
Query: 8 SMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
+ ++T ++G + +V L + + ++++ + V
Sbjct: 266 TFAVLTFNLAGNSDGAFAAVNAVRLPQTARAVVMPAPQPRLQRF---LEPEIREGLLTVR 322
Query: 67 RIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK- 124
D + F S + +++P+L +A LN + + +D
Sbjct: 323 DEADRSVVVLRGDGLFASGSDRVLDRYVPVLSRVADALNSVEG-NVLVSGFSDDQPIRSV 381
Query: 125 ---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+N +SQ RAD +K L R R + G P+ ND+ R N+R+E+
Sbjct: 382 RFPSNWQLSQARADSVKKMLAVRITRPER-LRAEGRGDADPLAPNDSPANRARNRRVEVT 440
Query: 182 IF 183
+
Sbjct: 441 LL 442
>gi|254779677|ref|YP_003057783.1| Peptidoglycan-associated lipoprotein precursor; putative petide
signal [Helicobacter pylori B38]
gi|254001589|emb|CAX29646.1| Peptidoglycan-associated lipoprotein precursor; putative petide
signal [Helicobacter pylori B38]
Length = 179
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 60/184 (32%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + + +GC K + + +K E + +
Sbjct: 1 MKRSSAFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCAQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|253700147|ref|YP_003021336.1| hypothetical protein GM21_1522 [Geobacter sp. M21]
gi|251774997|gb|ACT17578.1| conserved repeat domain protein [Geobacter sp. M21]
Length = 1984
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ I + L + +L+ A +L P + ++ HTD IG+++ N
Sbjct: 1701 NRREAILLTLSGGAFVFDRSELTLEAKRLLKGAARVLRARPREKVIVEGHTDGIGSVEYN 1760
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ +SQ R D YL++ + + R + P+ N T GR+ N+R+E+ +G
Sbjct: 1761 MALSQRRCDAAADYLVREEGIARSRLLRRWYGKSRPVADNVTSPGRRMNRRVEL----KG 1816
Query: 187 NIKK 190
+ K+
Sbjct: 1817 DFKE 1820
>gi|325067556|ref|ZP_08126229.1| OmpA/MotB domain protein [Actinomyces oris K20]
Length = 336
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 2/128 (1%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFP-STVIAIQSH 116
D + T + V+F ++ L + +L + + K+P + I H
Sbjct: 27 ADDSSDTKQDEKSTTVTVAGDVTFATDSDQLSAQADSVLATVVEQIKKYPSGGELTITGH 86
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
D + +N +S+ RA + L + S SV G P NDT RQ N+
Sbjct: 87 IDDVADDAHNQDLSERRAKAVSERLKKLTDLSAWKESVSGKGESSPRVANDTDEHRQINR 146
Query: 177 RIEIQIFP 184
R+EI + P
Sbjct: 147 RVEITLTP 154
>gi|167586272|ref|ZP_02378660.1| peptidoglycan-associated lipoprotein [Burkholderia ubonensis Bu]
Length = 169
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 68/184 (36%), Gaps = 22/184 (11%)
Query: 1 MIKELGLSMFIMTT--ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K++ L++ +M ++ C + +K + T +
Sbjct: 2 MSKKVRLALAVMMVGALAACKSGVKLDEK-ANAGAMSTQPNPENVAQ------------- 47
Query: 59 QDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V + D ++ ++ P++Q A L P + IQ +T
Sbjct: 48 ----VTVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNT 103
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q+RA+ ++ + GV+ ++ +V + P + N+R
Sbjct: 104 DERGTSEYNLALGQKRAEAVRRAMALLGVADSQMEAVS-LGKEKPQAAGHDEASWAQNRR 162
Query: 178 IEIQ 181
++
Sbjct: 163 SDLV 166
>gi|126440077|ref|YP_001060632.1| ompA family protein [Burkholderia pseudomallei 668]
gi|126219570|gb|ABN83076.1| ompA family protein [Burkholderia pseudomallei 668]
Length = 310
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 150 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 209
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 210 TGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARADAVKGYLV 269
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI ND+ GR N+RIE +
Sbjct: 270 TK-GIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEFR 307
>gi|330502930|ref|YP_004379799.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328917216|gb|AEB58047.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 267
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
S + + + L+ + + L P + I+ +TD+ G
Sbjct: 141 SETERGLVMTLGDMLFDAGRADLQPAANRTVLKLVQFLQINPQRRVRIEGYTDNTGDAAE 200
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL +S+ RA + L+ GV + R I V G+ +P+ N + GR N+R+EI
Sbjct: 201 NLELSRARAQAVADLLVDLGVDAKR-IQVVGYGVDFPVAENASARGRAQNRRVEIV 255
>gi|326794296|ref|YP_004312116.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326545060|gb|ADZ90280.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 334
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 6/171 (3%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G G S + + ++ + + ++ + V IT +
Sbjct: 122 GAGQPSPSTFVDKSKADLEREKQIQQTEEDAQQISSVMKEEISKGTVEVETQEQTITIRL 181
Query: 77 PVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQ 131
SF L F+P++ ++ +L I+++ HTD+I ++N +S
Sbjct: 182 KDKGSFESGSAELNFDFIPVIDMVREVLIGVKG-NISVEGHTDNIPIESRRFQSNWQLSS 240
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
R+ + L G SV GFA P+ NDT R N+R+EI I
Sbjct: 241 ARSIAVAEELFATGALDQNRFSVTGFADTRPLVPNDTSANRATNRRVEIVI 291
>gi|309782503|ref|ZP_07677227.1| OmpA domain protein [Ralstonia sp. 5_7_47FAA]
gi|308918840|gb|EFP64513.1| OmpA domain protein [Ralstonia sp. 5_7_47FAA]
Length = 415
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 59/156 (37%), Gaps = 7/156 (4%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKK 91
I + + + + ++ + V + + K
Sbjct: 261 QAIGQITPPPPPKVVLRLAELLKDEIARGQVKVEEDATHSAVTFRGDDMFAGGRADVNAK 320
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVS 147
P+L IA+ + K P + + H+D+ +N ++S+ERA + YL RGV+
Sbjct: 321 VQPLLDKIASEITKVPG-KVTVTGHSDNQPIKTAKFPSNQVLSEERAVHVSEYLASRGVA 379
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R + G P+ N T GR N+R++I +
Sbjct: 380 QGR-LEAVGKGDTEPVADNSTWNGRAANRRVQIDVT 414
>gi|108563489|ref|YP_627805.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
HPAG1]
gi|107837262|gb|ABF85131.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
HPAG1]
Length = 179
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 62/184 (33%), Gaps = 8/184 (4%)
Query: 2 IKE--LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K + S+ ++GC K + + +K E + +
Sbjct: 1 MKRSSVFSSLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCTQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|15604604|ref|NP_221122.1| peptidoglycan-associated lipoprotein precursor (pal) [Rickettsia
prowazekii str. Madrid E]
gi|3861299|emb|CAA15198.1| PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN PRECURSOR (pal) [Rickettsia
prowazekii]
gi|292572420|gb|ADE30335.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia
prowazekii Rp22]
Length = 155
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 29/177 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ L+ + ++GC + T + +F+ +
Sbjct: 1 MKTKITLAFLALFMLAGCNTTKKT-----------TQMAGMVHQCEETSLIKDFEKHAGN 49
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
L K L+ A L+K P + ++ H D
Sbjct: 50 A-----------------VWFAFDSSSLSPKAKEELERQACWLSKHPEVKVTVEGHCDER 92
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + NL + + RA K +L +G++ NR ++ + P +T+ N+R
Sbjct: 93 GTREYNLALGERRAAAAKQFLANKGIAHNRLNTIS-YGKDKPAMIGNTEEAFSYNRR 148
>gi|148252339|ref|YP_001236924.1| OmpA domain-containing protein [Bradyrhizobium sp. BTAi1]
gi|146404512|gb|ABQ33018.1| putative outer membrane protein with ompA domain [Bradyrhizobium
sp. BTAi1]
Length = 464
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 1/161 (0%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S + T + KA+ + V +
Sbjct: 304 SGDALYDAAAGQIRTGLAKDVPQGWQVKADITVKPAAAPVDPTVCQQLFADLLGKARIRF 363
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L++ +L + I + P+ + I HTD+ G N +S++RA +
Sbjct: 364 ETGRSDLDRDSTGLLDRLVEIAMRCPAANVEIAGHTDAEGDAAANQALSEKRAQAVVD-Y 422
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + G+ P+ +NDT GR N+RIE +
Sbjct: 423 LVKAGLPAERFTAVGYGSAQPVASNDTGDGRAQNRRIEFLV 463
>gi|325269589|ref|ZP_08136204.1| OmpA family protein [Prevotella multiformis DSM 16608]
gi|324988067|gb|EGC20035.1| OmpA family protein [Prevotella multiformis DSM 16608]
Length = 289
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 65/141 (46%), Gaps = 12/141 (8%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +L++ + V + ++ + ++ + + + L IA I+ + + I
Sbjct: 133 REELKE--VDVQVLKGVVYISLADNMLYKSGSYEVNDRAEQTLSKIAKIITDYKDYDVLI 190
Query: 114 QSHTDSIGTL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ +TD++ +NN +S RA + YL R + + ++ G P+
Sbjct: 191 EGNTDNVPINTANDKMKNIRNNWDLSCLRAASVVQYLQDRFGVNPKRLTAGGRGEYNPLA 250
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
TNDT++G+Q N+R +I I P+
Sbjct: 251 TNDTELGKQRNRRTQIIITPK 271
>gi|331664170|ref|ZP_08365079.1| YfiB [Escherichia coli TA143]
gi|331058627|gb|EGI30605.1| YfiB [Escherichia coli TA143]
Length = 160
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 63/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAVKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEGLSLKRANVVADAWAMGGKIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|157889016|dbj|BAF80962.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 62/148 (41%), Gaps = 2/148 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
K+ + + G ++ IG T + + F ++ + +
Sbjct: 176 APKTPQTTTKQIEEKPQTKQIDKSCPEPRKGALLDHIGCEKTIALEGYFGF-DQISINPE 234
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F +Q + +L + P ++ HTDS G+ N +S ERA + +++
Sbjct: 235 FAQKIQEVGKVLEENPQYYTILEGHTDSTGSKTYNQKLSLERAKAVAKE-LEKSGVVKEK 293
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
I+ +G+ + P +NDTK GR N+R+E
Sbjct: 294 IATKGYGFDKPKASNDTKEGRAQNRRVE 321
>gi|304383212|ref|ZP_07365685.1| OmpA family protein [Prevotella marshii DSM 16973]
gi|304335683|gb|EFM01940.1| OmpA family protein [Prevotella marshii DSM 16973]
Length = 278
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + ++ + ++ + + + L IA I+ + + I+ +TD++
Sbjct: 136 VDVQVLKGVVYISLADNMLYKSGSYEINDRAAETLSKIAKIITDYKDYDVLIEGNTDNVP 195
Query: 122 TLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NN +S RA + YL R + ++ G P+ N T +G+Q N+R
Sbjct: 196 ISRENIRNNWDLSCLRASSVVQYLQTRYGVDPKRMTAGGRGEYNPLSDNSTALGKQRNRR 255
Query: 178 IEIQIFPR 185
+I I P+
Sbjct: 256 TQIIITPK 263
>gi|261839857|gb|ACX99622.1| hypothetical protein HPKB_1056 [Helicobacter pylori 52]
Length = 179
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 60/184 (32%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + + +GC K + + +K E + +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCAQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|170750466|ref|YP_001756726.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170656988|gb|ACB26043.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 319
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 12/131 (9%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ + L TG V ++ + P + +A +L P
Sbjct: 199 AERLKQDLDKTGKAVIQVN-----------FATDRAEILPASAPQIDAVAALLRTDPGLR 247
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+AI +TD G +N +S RA + + L+ + + GF P+ +ND+
Sbjct: 248 LAINGYTDGTGAAAHNQALSDGRAKAVVARLVGA-GIAKDRLRAEGFGAASPVASNDSAA 306
Query: 171 GRQNNQRIEIQ 181
GR N+R+E+
Sbjct: 307 GRAQNRRVELV 317
>gi|88802157|ref|ZP_01117685.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P]
gi|88782815|gb|EAR13992.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P]
Length = 278
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 5/141 (3%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPS 108
+QD I V+ ++ I + F + +L+ IA ++N P
Sbjct: 125 LTKNLTEGIQDKDIEVNVEKTVVFISISDKLLFKSGSYNVTDGAYVVLEKIAKVINDQPE 184
Query: 109 TVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I+ HTDS ++N +S RA I L + + + P+
Sbjct: 185 MEVMIEGHTDSSPIKREIIQDNWDLSALRATAITRILQYKFGVQPNRLIAAARSQYVPLA 244
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
NDT + N+R +I I PR
Sbjct: 245 PNDTAENKSKNRRTKIIIMPR 265
>gi|319943001|ref|ZP_08017284.1| peptidoglycan-associated lipoprotein [Lautropia mirabilis ATCC
51599]
gi|319743543|gb|EFV95947.1| peptidoglycan-associated lipoprotein [Lautropia mirabilis ATCC
51599]
Length = 189
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 57/167 (34%), Gaps = 3/167 (1%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--EFQMQLQDTGIVVSRIGDMIT 73
SGC + + D + + +
Sbjct: 21 SGCTSVDLGESDEHAVSATDEATQGQEGQGQDGNLDSGHDITPVQPQDEATDPLQDPNSP 80
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++ P+++ A L+ I ++ +TD G+ + NL + Q+R
Sbjct: 81 LAKREVFFEFDSFAILPEYQPIIEAHANYLSAHRDKHIVLEGNTDEFGSREYNLALGQKR 140
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
AD ++ L GV N+ S+ + + P + + R N+R++I
Sbjct: 141 ADAVRRALSTLGVDENQMESIS-YGEEKPRASGTDESSRSQNRRVDI 186
>gi|244538688|dbj|BAH82838.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 2/148 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
K+ + + G ++ IG T + H F ++ + +
Sbjct: 176 APKTPQTTTKQIEEKPQTKQIDKSCPEPRKGALLDHIGCEKTIALEGHFGF-DQISINPE 234
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F +Q + +L + P ++ HTDS G+ N +S ERA + +++ +
Sbjct: 235 FAQKIQEVGKVLEENPQYYTILEGHTDSTGSKTYNQKLSLERAKAVAKE-LEKSGVAKEK 293
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
I+ +G+ + P +NDTK GR N+R+E
Sbjct: 294 IATKGYGFDKPKASNDTKEGRAQNRRVE 321
>gi|261342034|ref|ZP_05969892.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
gi|288315690|gb|EFC54628.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
Length = 161
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 26/183 (14%)
Query: 1 MIKELGLSMFIM-TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K +F+ ++GC + K + + N+ G D+
Sbjct: 1 MLKRYLAPLFMASLVLAGCQAPPKGKFTAEQIAAMQSYGFNELNGDWSLGLSDKI----- 55
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ ++ L + ++ +A+ L + HTD+
Sbjct: 56 --------------------LFDKNDARLRPESETQIRTMASRLAATGLNHARMDGHTDN 95
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+ + + ++ +G KYP+ +N T GR N+R+
Sbjct: 96 YGEESYNEALSLKRANAVADAWAKGANIPRGNLTTQGLGKKYPVASNSTPQGRAENRRVA 155
Query: 180 IQI 182
+ I
Sbjct: 156 VVI 158
>gi|15596316|ref|NP_249810.1| YfiB [Pseudomonas aeruginosa PAO1]
gi|218892915|ref|YP_002441784.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|254234254|ref|ZP_04927577.1| hypothetical protein PACG_00091 [Pseudomonas aeruginosa C3719]
gi|254239490|ref|ZP_04932812.1| hypothetical protein PA2G_00103 [Pseudomonas aeruginosa 2192]
gi|9947038|gb|AAG04508.1|AE004542_4 YfiB [Pseudomonas aeruginosa PAO1]
gi|126166185|gb|EAZ51696.1| hypothetical protein PACG_00091 [Pseudomonas aeruginosa C3719]
gi|126192868|gb|EAZ56931.1| hypothetical protein PA2G_00103 [Pseudomonas aeruginosa 2192]
gi|218773143|emb|CAW28955.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
Length = 168
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 62/180 (34%), Gaps = 28/180 (15%)
Query: 5 LGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L L++F + ++GC + E LQ+ G
Sbjct: 12 LALALFSLVLGLAGCQTKPPQTG-----------------------LSAEQIAVLQEQGF 48
Query: 64 VVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ G + V F + L L IA L + ++ HTD+ G
Sbjct: 49 ELRDEGWE--FGMSSKVLFGNNLDRLNPDSRNTLTKIARALLAVDIDKVRLEGHTDNYGD 106
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA+ + + + I VRG P+ N T+ GR N+R+ I +
Sbjct: 107 EGYNQKLSERRAESVAAVFREA-GMPAANIEVRGLGMSKPVADNKTRAGRSENRRVAIIV 165
>gi|307565706|ref|ZP_07628175.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
gi|307345532|gb|EFN90900.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
Length = 286
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +L++ + + + ++ + ++ + + + L IA I+ + + + I
Sbjct: 130 REELKE--VDIQVLKGVVYISLADNMLYKSGSYEINSRAEQTLSKIAKIIMDYNNYDVLI 187
Query: 114 QSHTDSIGTL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ +TD++ +NN +S RA + +YL R I+ G PI
Sbjct: 188 EGNTDNVPINTTNKIMANIRNNWDLSALRATSVANYLQTRFGVDPSRITAGGRGEYNPIV 247
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
NDT++GRQ N+R +I I P+
Sbjct: 248 GNDTELGRQRNRRTQIIITPK 268
>gi|293611455|ref|ZP_06693750.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826239|gb|EFF84609.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123511|gb|ADY83034.1| OmpA/MotB [Acinetobacter calcoaceticus PHEA-2]
Length = 159
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 28/181 (15%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+L + T++GC + L+ G
Sbjct: 7 KLSFIALLCITLAGCLS--------------------------FGPLKYRQVKLLKKEGF 40
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V++ G + + + L++ L +A LNK+ + I HTD +G
Sbjct: 41 VLTDEGWTLGLP-ERLLFDFNNAQLKQSHEAELVRLANQLNKYDLNKLKIVGHTDDVGDA 99
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S+ERA + + + R I V G P N T R N+R+ I +
Sbjct: 100 TYNQKLSEERAQSVANLFLTR-GFKKENIYVIGRGSTQPYVPNTTNENRAINRRVAIVVI 158
Query: 184 P 184
P
Sbjct: 159 P 159
>gi|241663269|ref|YP_002981629.1| type VI secretion system OmpA/MotB family protein [Ralstonia
pickettii 12D]
gi|240865296|gb|ACS62957.1| type VI secretion system OmpA/MotB family protein [Ralstonia
pickettii 12D]
Length = 415
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 59/156 (37%), Gaps = 7/156 (4%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKK 91
I + + + + ++ + V + + K
Sbjct: 261 QAIGQITPPPPPKVVLRLAELLKDEIARGQVKVEEDATHSAVTFRGDDMFAGGRADVNAK 320
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVS 147
P+L IA+ + K P + + H+D+ +N ++S+ERA + YL RGV+
Sbjct: 321 VQPLLDKIASEITKVPG-KVTVTGHSDNQPIKTAKFPSNQVLSEERAVHVSEYLASRGVA 379
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R + G P+ N T GR N+R++I +
Sbjct: 380 QGR-LEAVGKGDTEPVADNSTWNGRAANRRVQIDVT 414
>gi|153833086|ref|ZP_01985753.1| outer membrane protein [Vibrio harveyi HY01]
gi|148870654|gb|EDL69561.1| outer membrane protein [Vibrio harveyi HY01]
Length = 208
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 76/200 (38%), Gaps = 14/200 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K + + +F++ S C ++ ++ ++ + D + D + +
Sbjct: 1 MKIIPI-LFMVCLTSACSGSNSNRETGDEYEYIETPNADQIADLIDDDSDGVINA-RDLC 58
Query: 59 QDT--GIVVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
T G + G + ++ F+ + ++ L ++P+T I
Sbjct: 59 PGTAEGSEIDNDGCGRYAKSSQQMQIRVLFANDSSAIDPVFVNQISDLSDFLKEYPTTSI 118
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+Q +T GT + NL +S+ RA+ ++ LI S + + GF +
Sbjct: 119 ELQGYTSITGTDEYNLALSKRRAESVRQELINN-GISPERLRIVGFGETNLASQGTDETS 177
Query: 172 RQNNQRIEIQIFP-RGNIKK 190
N+R+ + +G I+K
Sbjct: 178 HALNRRVTATVVGYKGEIEK 197
>gi|328948405|ref|YP_004365742.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
gi|328448729|gb|AEB14445.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
Length = 240
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 56/155 (36%), Gaps = 8/155 (5%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLE-KKFLPMLQ 97
+ G ++ KA F +++ I ++ + + F L ++ L
Sbjct: 84 GRALGPAMKKAISSFAPEVKSNKITITSDERGLVISLASDTFFEEGSAELNIEEARGTLI 143
Query: 98 LIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQE----RADVIKSYLIQRGVSSNRF 151
+A + I+ HTD+ +++ S + + +
Sbjct: 144 NLAKFFASPEVAGRRWRIEGHTDNRPVPASSIYPSNWEFSAARAANVLHYLADFGVDEQQ 203
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S+ G+A P +NDT GR N+R+++ + G
Sbjct: 204 FSIAGYADTRPKLSNDTAEGRAYNRRVDVIVLDDG 238
>gi|254251112|ref|ZP_04944430.1| hypothetical protein BDAG_00285 [Burkholderia dolosa AUO158]
gi|124893721|gb|EAY67601.1| hypothetical protein BDAG_00285 [Burkholderia dolosa AUO158]
Length = 431
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V I + + + + P+L +A + +
Sbjct: 293 RLSQLLRDEIARGVLTVDEDERRSIVVFKGDSMFASGQSTVLPGIEPILDKVAREVARVG 352
Query: 108 STVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
T + + HTD+ NNL +S++RA + L + G + R I G P+
Sbjct: 353 GT-VLVTGHTDNQPIRSAAFANNLALSEKRAAYVAQILQRDGTPAER-IRAVGKGDTQPV 410
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
N T GR N+R+EI +
Sbjct: 411 GDNATAAGRALNRRVEIMVT 430
>gi|260575964|ref|ZP_05843959.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259021890|gb|EEW25191.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 650
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 56/161 (34%), Gaps = 2/161 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHV 80
+ + + + + +D DE L + D +
Sbjct: 443 TGNQGARARITQVLSGQLGQGKSFKVDVTYDEALDPLAALPTPAECLADINTALAVQKIT 502
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L +A +L K P + I HTD+ G+ + N +SQ RA+ +
Sbjct: 503 FAPGSAEIAASAGKTLDALAEVLIKCPDLRLEIGGHTDAQGSTEGNRALSQARAEAVLLG 562
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L R ++ G+ P+ N T GR+ N+RIE
Sbjct: 563 LQGRRAPVA-GLTAVGYGEDKPLADNGTDEGREANRRIEFT 602
>gi|256846182|ref|ZP_05551640.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|294784699|ref|ZP_06749987.1| OmpA family protein [Fusobacterium sp. 3_1_27]
gi|256719741|gb|EEU33296.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|294486413|gb|EFG33775.1| OmpA family protein [Fusobacterium sp. 3_1_27]
Length = 195
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ ++ + I + F++ ++ ML + + K +
Sbjct: 40 NALEINKMEALKEEPPEEMTIVLDDRALNFDFDKSFVKPQYDEMLTNLKEFIMKN-DYEL 98
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I+ HTD I + + N+ +S+ RA+ +K LI+ G+ +R +++ + P+ N T G
Sbjct: 99 TIEGHTDYIASNQYNMGLSKRRAEAVKVKLIELGLDPSRIVAIVPKGEEEPVADNKTTEG 158
Query: 172 RQNNQRIEIQIFPRGN 187
R N+R+E ++ RG+
Sbjct: 159 RAKNRRVEFKLVKRGS 174
>gi|160884848|ref|ZP_02065851.1| hypothetical protein BACOVA_02838 [Bacteroides ovatus ATCC 8483]
gi|156109883|gb|EDO11628.1| hypothetical protein BACOVA_02838 [Bacteroides ovatus ATCC 8483]
Length = 280
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 4/152 (2%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
N + + L +D D V + G + + L+K+ L
Sbjct: 114 AQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALG 173
Query: 98 LIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+A +LNK + I+ HTD+ K+N +S RA + LI+ + I
Sbjct: 174 KLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQ 233
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G PID N+T GR N+R EI + P+
Sbjct: 234 PSGRGEYMPIDDNETIEGRSKNRRTEIIMAPK 265
>gi|295836759|ref|ZP_06823692.1| secreted protein [Streptomyces sp. SPB74]
gi|295826190|gb|EFG64725.1| secreted protein [Streptomyces sp. SPB74]
Length = 204
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 61/163 (37%), Gaps = 2/163 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + S + + + + + ++ + +
Sbjct: 37 GSVTTSPPPDVDASSPGLRLADGARLAPAKVLDIKSVVEDLGGEERREDTNTDVKIALQA 96
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V F + L+ ++ IA K + + + TD++G+ + +S+ RAD++
Sbjct: 97 EVLFDKDKFALDPSGRSRIEAIADEAKKQRARTVRVFGFTDNLGSYAHGKTLSKRRADIV 156
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
L VRG++ YPI N T+ GR+ N+R+EI
Sbjct: 157 HDELAPHLGPEV-TFEVRGYSEDYPIADNTTEEGRRKNRRVEI 198
>gi|237722039|ref|ZP_04552520.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|298483221|ref|ZP_07001400.1| flagellar motor protein MotB [Bacteroides sp. D22]
gi|229448908|gb|EEO54699.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|298270538|gb|EFI12120.1| flagellar motor protein MotB [Bacteroides sp. D22]
Length = 280
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 4/152 (2%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
N + + L +D D V + G + + L+K+ L
Sbjct: 114 AQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALG 173
Query: 98 LIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+A +LNK + I+ HTD+ K+N +S RA + LI+ + I
Sbjct: 174 KLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQ 233
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G PID N+T GR N+R EI + P+
Sbjct: 234 PSGRGEYMPIDDNETIEGRSKNRRTEIIMAPK 265
>gi|212634658|ref|YP_002311183.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212556142|gb|ACJ28596.1| OmpA [Shewanella piezotolerans WP3]
Length = 178
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 8/178 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + + IS C S E + + + + G Q
Sbjct: 8 KAMLVVLPIMAISACSSTS-ESETDATSSTESSTTGSANNGVETGGVAPVLTPAEQQQLK 66
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ I + ++F +L+ L + P+ + I+ H D GT
Sbjct: 67 FQELRKEHII------YFDFDRSSVSQQFAEVLEAHGDYLVEHPNVRVMIEGHADERGTP 120
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA + +Q +SV + + P+D + T G N+R +
Sbjct: 121 EYNIALGERRAKAVAK-YLQGMGVQPSQMSVVSYGEEKPMDLSRTDDGFAKNRRAVLV 177
>gi|57505318|ref|ZP_00371247.1| omp18 [Campylobacter upsaliensis RM3195]
gi|315639283|ref|ZP_07894445.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter
upsaliensis JV21]
gi|57016454|gb|EAL53239.1| omp18 [Campylobacter upsaliensis RM3195]
gi|315480609|gb|EFU71251.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter
upsaliensis JV21]
Length = 165
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 61/184 (33%), Gaps = 23/184 (12%)
Query: 1 MIKELGLSMFI-MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L S+ ISGC S + + +
Sbjct: 1 MKKILFTSIAAFAIVISGCSTKSTSVSGGTDVDGSRGSGGSDGW---------------- 44
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTD 118
+ + + + + ++ A I N + T I ++ + D
Sbjct: 45 ----DIDSKISQLNDTLGKVYFDFDKFNIRSDMQSVVSTNANIFNTEVSGTSITVEGNCD 100
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N + +RA +K LI + ++ ISV+ + P+ T TK N+R
Sbjct: 101 EWGTDEYNQALGLKRAKAVKDALISQ-GVNSDRISVKSYGETNPVCTEKTKTCDAQNRRA 159
Query: 179 EIQI 182
E ++
Sbjct: 160 EFKL 163
>gi|225849164|ref|YP_002729328.1| chemotaxis protein MotB [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643203|gb|ACN98253.1| chemotaxis protein MotB (Motility protein B) [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 265
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 72/168 (42%), Gaps = 11/168 (6%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIPVHVS 81
+ V ++ + K ++ + ++ + + V I + I ++
Sbjct: 62 STSAPPSIIEGVGVKQKREDTKKKIKERVEQIVKKLNLEGKVQVEVIPMGVRIRILDYIL 121
Query: 82 FVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQERAD 135
F V ++K++ +L +A ++ + + + ++ HTD+I +N +S RA
Sbjct: 122 FNPCSVEIKKEYQELLSSVAEVIKE-ANLPVEVEGHTDNIPPSGNCIYPSNWELSAARAA 180
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +LIQ + G+A PI N +++GR N+RIEI +
Sbjct: 181 SVVRFLIQSKNLPPAMFTAVGYADTRPIAPNTSEIGRSMNRRIEINLI 228
>gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1]
gi|161323983|gb|EDP95316.1| 30S ribosomal protein S1 [Kordia algicida OT-1]
Length = 347
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 3/146 (2%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+D+V+ + G K ++ ++ I+ + + ++ +
Sbjct: 203 SDVVSAQIGIVESKEFEQTIEKITAEDIINEINSNGFISL--HINFDTGKSRIKADSYEI 260
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ I +L P+ I+I+ HTD+ G N+ +S+ RA + L+ G+ +R S
Sbjct: 261 ISEITKMLKTNPNLKISIEGHTDNAGDESYNMKLSKNRAKSVLMALVDEGIDESRLKS-D 319
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQ 181
GF PI N T G+ N+R+E++
Sbjct: 320 GFGQTKPIGDNTTDKGKAKNRRVELR 345
>gi|302875899|ref|YP_003844532.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|307689333|ref|ZP_07631779.1| chemotaxis MotB protein [Clostridium cellulovorans 743B]
gi|302578756|gb|ADL52768.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B]
Length = 245
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 45 SSLDKAEDEFQMQLQDTG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ + + + + ++ G ++ D + I + F + + K+ P+L I
Sbjct: 98 NKMHELKAKLDQEIAREGYSDKVITELNKDGLYISIQDVILFNSGDANVLKEVSPLLTEI 157
Query: 100 ATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ ++ I I HTD++ ++N +S RA + ++++ G + +S++
Sbjct: 158 SHLIRDI-DNRIRIVGHTDNVPISTVKFRSNWDLSAMRAINVMNFMVDTGKLNPEKVSIQ 216
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ P N T R N+R+EI I
Sbjct: 217 AYGEYMPRFDNSTAENRARNRRVEIFII 244
>gi|197117521|ref|YP_002137948.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
gi|197086881|gb|ACH38152.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
Length = 450
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 60/167 (35%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
+S + V + + + + +++ + +
Sbjct: 283 ASSASSVQPPPVAAEIAKTAPAPRENDSTEATDQAKQIELEAEKKPASTPSVPVAAPLLK 342
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + F+ + + I + + P + I H D G+ +NL +S++RA
Sbjct: 343 ATFEFDCNSYKIRPSFIDVGRKIGLFMKRNPQIIAQIHGHADITGSDDHNLALSEKRAVR 402
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K YL++ S +R PI N T+VGR+ N+R + I
Sbjct: 403 TKQYLMKMYNLSADRFEIRTMGSSEPIADNTTEVGRKKNRRALVIIL 449
>gi|15895120|ref|NP_348469.1| flagellar motor protein MotB [Clostridium acetobutylicum ATCC 824]
gi|15024821|gb|AAK79809.1|AE007693_7 Flagellar motor protein MotB [Clostridium acetobutylicum ATCC 824]
gi|325509259|gb|ADZ20895.1| Flagellar motor protein MotB [Clostridium acetobutylicum EA 2018]
Length = 254
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 73/184 (39%), Gaps = 11/184 (5%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL-DKAEDEFQMQLQDTG----IVVS 66
+ SG G K + ++ N + + ++ + ++ + G I
Sbjct: 63 VLVESGTGNGVVSSMKESTPSNAQSESNNSKIEQDMMNEIKKNIDQKVAENGYTDKIKSK 122
Query: 67 RIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-- 123
+ + I + F + + PML I+ +++ I + HTD+I
Sbjct: 123 ITEEGLAISIQDIILFRSGDSTVLANIQPMLIEISKMIHSL-DNNIKVTGHTDNIPIATE 181
Query: 124 --KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+N +S RA + +++ G + S++ + P +TN T+ GR N+R+EI
Sbjct: 182 TFHSNWELSASRALNVMKFMVTSGGVDEKRFSIQAYGEYSPEETNSTEQGRARNRRVEIF 241
Query: 182 IFPR 185
I +
Sbjct: 242 ILRK 245
>gi|261251362|ref|ZP_05943936.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
gi|260938235|gb|EEX94223.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
Length = 329
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 1/125 (0%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ +++ + L + L + L ++P + + HT
Sbjct: 198 TEQHPQSITKSEMFDKVTLSSGPFDSESSELNESSSQQLSQLVATLKEYPEAKVEVVGHT 257
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
DS G+ N +S +RA + + ++ + IS+ G PI N T GR NN+R
Sbjct: 258 DSTGSSSYNQALSIQRATEVSN-FLESEGIDSSRISIDGHGETQPIAPNSTSQGRANNRR 316
Query: 178 IEIQI 182
+E+ I
Sbjct: 317 VEVTI 321
>gi|256027094|ref|ZP_05440928.1| Outer membrane protein [Fusobacterium sp. D11]
gi|289765073|ref|ZP_06524451.1| outer membrane protein [Fusobacterium sp. D11]
gi|289716628|gb|EFD80640.1| outer membrane protein [Fusobacterium sp. D11]
Length = 151
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
I + ++ ++ ML + + K + I HTD I + N+
Sbjct: 10 EEMTIVLDDRALNFDFDKSVVKPQYNEMLTNLKDFIEKN-DYEVTIVGHTDYIASNAYNM 68
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S+ RA+ +K+ LI+ G+ +R + + + PI N T GR N+R+E ++ RG+
Sbjct: 69 GLSKRRAEAVKAKLIELGLDPSRIVGIVPRGEEEPIADNATTEGRAKNRRVEFKLVKRGS 128
>gi|70732082|ref|YP_261838.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens Pf-5]
gi|68346381|gb|AAY93987.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens Pf-5]
Length = 165
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 21/165 (12%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + N N E + I
Sbjct: 21 GCSSKGGDNAGEGAVDPNAGYGANTGAVDGSLSEEAALRA-------------------I 61
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + ++ +TD GT + N+ + + RA
Sbjct: 62 TTFYFEYDSSDLKPEAMRALDVHAKDLKAN-GARVVLEGNTDERGTREYNMALGERRAKA 120
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+ + S + + + + P+ T + N+R+E++
Sbjct: 121 VQRYLVLQ-GVSPAQLELVSYGKERPVATGHDEQSWAQNRRVELR 164
>gi|319778078|ref|YP_004134508.1| ompa/motb domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171797|gb|ADV15334.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 369
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 53/151 (35%), Gaps = 2/151 (1%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE 89
V + +S + + + + F + L+
Sbjct: 213 IADGSKPAVVQPVAASTADVGPVTTDAAKTSFSDEECLNRFAVLSRTGAIYFRTASARLD 272
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ P+L + ++ K P + + HTDS G+ N +S+ RA + I
Sbjct: 273 SQSRPLLAEVVGVVGKCPGLKVEVSGHTDSDGSPIENKRLSERRAQAVAD-AIVAAGIPR 331
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
I+ G+ + P+ NDT + N+RIE
Sbjct: 332 TQIAATGYGEERPVADNDTPKNKALNRRIEF 362
>gi|331648347|ref|ZP_08349435.1| YfiB [Escherichia coli M605]
gi|330912368|gb|EGH40878.1| integral membrane protein YfiB [Escherichia coli AA86]
gi|331042094|gb|EGI14236.1| YfiB [Escherichia coli M605]
Length = 160
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 63/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLLAPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N ++S +RA+V+ G + +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEVLSLKRANVVADAWAMGGQIPRSNLITQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQIF 183
+ I
Sbjct: 155 VVIT 158
>gi|258510423|ref|YP_003183857.1| OmpA/MotB domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257477149|gb|ACV57468.1| OmpA/MotB domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 271
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 59/172 (34%), Gaps = 14/172 (8%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
++ L + D++ + + V + +
Sbjct: 96 ATTQNQQSNEDLTDAKQLDLLYREIQQY-------IASHHLSGEVQVIDEARGVQITMRD 148
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQER 133
F + L K +++ + + + I ++ +TD+ +N +S R
Sbjct: 149 VALFNTGQAVLLPKAKAIIEGLIPFFKQISN-DIVVEGYTDTQPINTPIYPSNWELSAAR 207
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
A + +L + ++ G+ +P+ +N T GRQ N+R+ I I +
Sbjct: 208 AMSVVRFLAD-HGINPTRLAGMGYGQYHPVASNATPAGRQANRRVNIVILRK 258
>gi|218290401|ref|ZP_03494531.1| OmpA/MotB domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239529|gb|EED06723.1| OmpA/MotB domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 271
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 59/172 (34%), Gaps = 14/172 (8%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
++ L + D++ + + V + +
Sbjct: 96 ATTQNQQSNEDLTDAKQLDLLYREIQQY-------IASHHLSGEVQVIDEARGVQITMRD 148
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQER 133
F + L K +++ + + + I ++ +TD+ +N +S R
Sbjct: 149 VALFNTGQAVLLPKAKAIIEGLIPFFKQISN-DIVVEGYTDTQPINTPIYPSNWELSAAR 207
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
A + +L + ++ G+ +P+ +N T GRQ N+R+ I I +
Sbjct: 208 AMSVVRFLAD-HGINPTRLAGMGYGQYHPVASNATPAGRQANRRVNIVILRK 258
>gi|300024878|ref|YP_003757489.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299526699|gb|ADJ25168.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 387
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L + T L V+ ++ TDS+G+ + N ++S+ RA I
Sbjct: 284 FNEDSAAIAPASRTALSALVTALKACAGVVVEVRGFTDSVGSSEGNQMLSELRAKKIVD- 342
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + ++ G P+ N+T GR+ N+R+E +
Sbjct: 343 FLTKAGVEASKLTAVGKGEDDPVADNETPEGRRLNRRVEFVL 384
>gi|148652725|ref|YP_001279818.1| peptidoglycan-associated lipoprotein [Psychrobacter sp. PRwf-1]
gi|148571809|gb|ABQ93868.1| Peptidoglycan-associated lipoprotein [Psychrobacter sp. PRwf-1]
Length = 170
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 54/176 (30%), Gaps = 17/176 (9%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ L + +GC S + V + + + L
Sbjct: 10 ISLVSAALLVTTGCASKSNTSEFVVAPMAVPGNAAYQT-------------GPLVSNSEQ 56
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V + V ++ + +L L+ P + + HTD G+ +
Sbjct: 57 VQADAQNVR---SVVRFAFDSYDIDAEAANILDEQVAFLSSHPDARVLVAGHTDERGSSE 113
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
N + + RA ++SYL + + + + P+ + N+R E+
Sbjct: 114 YNHALGERRAQAVRSYLASK-GIMDARVETISYGEDRPVAAGSDEASYSQNRRAEL 168
>gi|330445542|ref|ZP_08309194.1| peptidoglycan-associated lipoprotein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328489733|dbj|GAA03691.1| peptidoglycan-associated lipoprotein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 180
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 55/181 (30%), Gaps = 7/181 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L + + +MT ++ C +
Sbjct: 6 ILKSLAIVLPMMT-LAACSSTDSADSSAANQNGTNGGNS-----RPDQSIVTPVDQSGSM 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + ++ ++ ML+ A L PS + ++ H D
Sbjct: 60 SEEQLLEQQLQQLRQEQTVFFKFDNSEIQPEYQAMLEAHAAYLRDHPSVKVIVEGHADER 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + YL +S+ + + P+ T N+R +
Sbjct: 120 GTPEYNIALGERRATAVAQYLQAL-GVPASQLSIVSYGEEKPLVLGHTDADYAKNRRAVL 178
Query: 181 Q 181
Sbjct: 179 V 179
>gi|317014512|gb|ADU81948.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
Gambia94/24]
Length = 179
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 60/184 (32%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + + +GC K + + +K E + +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCVQKTRECYRENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|301328313|ref|ZP_07221421.1| OmpA family protein [Escherichia coli MS 78-1]
gi|300845245|gb|EFK73005.1| OmpA family protein [Escherichia coli MS 78-1]
Length = 188
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 35/188 (18%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + L + +SGC ++ + +V G+
Sbjct: 1 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 -FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L +A +L ++P T + + +TDS G N+ +SQ+RAD + S L +G
Sbjct: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALTPQG 180
Query: 146 VSSNRFIS 153
V ++R +
Sbjct: 181 VDASRIRT 188
>gi|149915641|ref|ZP_01904167.1| OmpA/MotB [Roseobacter sp. AzwK-3b]
gi|149810533|gb|EDM70376.1| OmpA/MotB [Roseobacter sp. AzwK-3b]
Length = 218
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 72/183 (39%), Gaps = 10/183 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L L+ + ++ C + + F ++ ++++ + +
Sbjct: 1 MKHL-LATASLVALAAC-TGQGDYRNSFFSEAGSVVDSGSFGNANMNNV-----LVMTGE 53
Query: 62 GIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
VS + + +P V+F L+ L A+ + +FP + HTD +
Sbjct: 54 KGYVSDLANRFASEVPSTVNFAFDSAHLDAAARNTLNAQASWIKQFPEVRFRVYGHTDKV 113
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ N + Q RA+ + +YL G+S +R +V + P+ T+ N+R
Sbjct: 114 GSESYNRHLGQRRANAVVNYLTSHGISRSRLEAVVSYGETQPVVV--TEGREPRNRRTVT 171
Query: 181 QIF 183
++
Sbjct: 172 EVT 174
>gi|84501653|ref|ZP_00999825.1| peptidoglycan-associated lipoprotein [Oceanicola batsensis
HTCC2597]
gi|84390274|gb|EAQ02833.1| peptidoglycan-associated lipoprotein [Oceanicola batsensis
HTCC2597]
Length = 171
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 69/189 (36%), Gaps = 21/189 (11%)
Query: 2 IKELGLSMFI--MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K L +M + ++ C + R V L + D GS+ D +
Sbjct: 1 MKHLTRAMLVVSALALAACSQSERFDNDVALGGTAGADGAV-VPGSANDPTSPLYFQSAV 59
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + V + L + L A L I+ H D
Sbjct: 60 GDRV----------------LFAVDQSTLSDEARATLNAQAQWLMTNSDYTAVIEGHADE 103
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + RA+ + YLI +GV+++R +V + + PI+ T+ N+R
Sbjct: 104 QGTREYNLALGARRANAAREYLITQGVAASRLKTVT-YGKERPIEICSTESCYAKNRRA- 161
Query: 180 IQIFPRGNI 188
+ + G I
Sbjct: 162 VTVLAAGAI 170
>gi|323491818|ref|ZP_08096993.1| OmpA family protein [Vibrio brasiliensis LMG 20546]
gi|323313953|gb|EGA67042.1| OmpA family protein [Vibrio brasiliensis LMG 20546]
Length = 188
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 59/151 (39%), Gaps = 3/151 (1%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSFV-SEVFLEKKF 92
V G ++ + Q L GI + G+ + + + F +
Sbjct: 35 SNSGVKGPMGQQRTQSYSDLQNFLISNGIDYELLPGNHVMVRLKDTIKFNTGSSRVAPDS 94
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L ++ L PS I I H DS G N +S +RA +K L+ V+ + I
Sbjct: 95 KYWLDMMGNYLATQPSIDIVIDGHADSTGAPSFNDSLSMKRAKAVKQQLVNNRVAMDS-I 153
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RG+ P +N TK G+ N+R+E+
Sbjct: 154 YTRGYGEYVPACSNRTKAGKACNRRVEVLFI 184
>gi|256833230|ref|YP_003161957.1| OmpA/MotB domain-containing protein [Jonesia denitrificans DSM
20603]
gi|256686761|gb|ACV09654.1| OmpA/MotB domain protein [Jonesia denitrificans DSM 20603]
Length = 305
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 60/166 (36%), Gaps = 3/166 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI--PVH 79
E++ + + S D+ + + + + + + +
Sbjct: 115 DAEEEAIDPKDMAAAQAEYENLQSLADRIDAALRKRGLEGSVEYRINERGLIVGLVSDEL 174
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L K ++ A IL + I +++ K+N +S +RA +
Sbjct: 175 FFQADTARLTKTTERVVDTTARILRELDNELSIEGHANSLQSVNYKSNWELSSDRATQVL 234
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+++G S I+ GF P+ NDTK G + N+R++I I
Sbjct: 235 RRYVEKGKISGTRIAAVGFGDTRPLADNDTKRGLKINRRVDIVILS 280
>gi|124004728|ref|ZP_01689572.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123989851|gb|EAY29380.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 513
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 52/101 (51%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L++K +L +A + +FP I + HT +IGT NL +S++RA+ ++ Y
Sbjct: 403 FKLGSDELDEKSKALLDSVAQKMMEFPEAEIEVSGHTCNIGTKAGNLRLSKKRAEAVRKY 462
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L++ + I G+A P+ N + R+ N+R+ +
Sbjct: 463 LMEYDGIDPKRIKTAGYADNRPLVPNVNEPNRKKNRRVAFK 503
>gi|295085810|emb|CBK67333.1| Flagellar motor protein [Bacteroides xylanisolvens XB1A]
Length = 256
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 4/152 (2%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
N + + L +D D V + G + + L+K+ L
Sbjct: 90 AQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALG 149
Query: 98 LIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+A +LNK + I+ HTD+ K+N +S RA + LI+ + I
Sbjct: 150 KLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQ 209
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G PID N+T GR N+R EI + P+
Sbjct: 210 PSGRGEYMPIDDNETIEGRSKNRRTEIIMAPK 241
>gi|237716994|ref|ZP_04547475.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262405762|ref|ZP_06082312.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|229442977|gb|EEO48768.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262356637|gb|EEZ05727.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
Length = 280
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 4/152 (2%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
N + + L +D D V + G + + L+K+ L
Sbjct: 114 AQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALG 173
Query: 98 LIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+A +LNK + I+ HTD+ K+N +S RA + LI+ + I
Sbjct: 174 KLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQ 233
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+D N+T GR N+R EI + P+
Sbjct: 234 PSGRGEYMPVDDNETIEGRSKNRRTEIIMAPK 265
>gi|329894187|ref|ZP_08270142.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC3088]
gi|328923212|gb|EGG30533.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC3088]
Length = 341
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
S + + + ++ + + GD I + L+ F L +
Sbjct: 192 ANANSKYQQLQADLADEIASGLAEIEKQGDKIIVRLANQGSFDSGSATLKNSFGGTLSKL 251
Query: 100 ATILNKFPSTVIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L+++ + I+ HTD++ K+N +S RA + YL+ + +
Sbjct: 252 GNTLSRYSG-SVLIEGHTDNVPVGFSERFKSNWDLSASRAAAVADYLLTSTPLQGGSVMI 310
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+G+A P+DTND+ VGR NN+RIE+ +
Sbjct: 311 KGYADSKPLDTNDSPVGRANNRRIEVIV 338
>gi|304395720|ref|ZP_07377603.1| peptidoglycan-associated lipoprotein [Pantoea sp. aB]
gi|308186084|ref|YP_003930215.1| Peptidoglycan-associated lipoprotein precursor [Pantoea vagans
C9-1]
gi|304357014|gb|EFM21378.1| peptidoglycan-associated lipoprotein [Pantoea sp. aB]
gi|308056594|gb|ADO08766.1| Peptidoglycan-associated lipoprotein precursor [Pantoea vagans
C9-1]
Length = 175
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 62/181 (34%), Gaps = 12/181 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + ++ C ++ N + +
Sbjct: 6 VLKGLMLALPV-LAVAACSSHKNNNNDQTGMGADGAYGANSGMNGNGGNMSSD------- 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+R+ + + + ++ + ML AT L PS + I+ H D
Sbjct: 58 ---EQARLQMQQLQQNNIVYFGLDKYDVQSDYAQMLDQHATFLRSNPSYKVTIEGHADER 114
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S +S+ + + P + N+R +
Sbjct: 115 GTPEYNIALGERRANAV-KMYLQGKGVSADQMSIVSYGKEKPAVLGHDEAAYSKNRRAVL 173
Query: 181 Q 181
Sbjct: 174 V 174
>gi|293369282|ref|ZP_06615869.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
gi|292635612|gb|EFF54117.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
Length = 256
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 4/152 (2%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
N + + L +D D V + G + + L+K+ L
Sbjct: 90 AQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALG 149
Query: 98 LIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+A +LNK + I+ HTD+ K+N +S RA + LI+ + I
Sbjct: 150 KLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQ 209
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+D N+T GR N+R EI + P+
Sbjct: 210 PSGRGEYMPVDDNETIEGRSKNRRTEIIMAPK 241
>gi|283833962|ref|ZP_06353703.1| peptidoglycan-associated lipoprotein [Citrobacter youngae ATCC
29220]
gi|291070093|gb|EFE08202.1| peptidoglycan-associated lipoprotein [Citrobacter youngae ATCC
29220]
Length = 172
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 59/181 (32%), Gaps = 15/181 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C ++ ++ E Q
Sbjct: 6 VLKGLMIALPVM-AIAACSSNKNASNDGSEGMLGAGTGMDANGSGNMSSEEQARLQMQQL 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + F ML A L PS + ++ H D
Sbjct: 65 QQNNI-------------VYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 111
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 112 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVL 170
Query: 181 Q 181
Sbjct: 171 V 171
>gi|241667271|ref|ZP_04754849.1| OmpA family protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254875822|ref|ZP_05248532.1| OmpA family protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254841843|gb|EET20257.1| OmpA family protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 418
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 76/196 (38%), Gaps = 24/196 (12%)
Query: 2 IKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L + + ++ I+GC + + + S T L+ +
Sbjct: 1 MKKLFNFAIVLPLVLAIAGCETFTGSENPSDENLSFPT----------LEPCTKKLIESN 50
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q + + G + L + +L + L +T I+ +
Sbjct: 51 QSFICLKEQQGPDLIQT--NIKFDADSYNLNDQAKQILNKLYAYLKLTDTTTFTIRGYAG 108
Query: 119 SIGTL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ + + N+ +S+ RA+ ++ YL++RG+ N I ++ Y+ PI NDT
Sbjct: 109 KVESKLLTDKNILTEYNIRLSKNRAESVEEYLVRRGLDKNNGIIIKALGYQDPIAPNDTS 168
Query: 170 VGRQNNQRIEIQIFPR 185
R NQR+EI + R
Sbjct: 169 SNRAINQRVEITLKSR 184
>gi|255531961|ref|YP_003092333.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255344945|gb|ACU04271.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 631
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 1/122 (0%)
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + ++ + +E L L L + +L S I IQ HTD++G
Sbjct: 509 QVALEKLSTGKNMVLKNIFFNTNEYTLLPASLTELNTLQQLLKNNASLCIEIQGHTDNVG 568
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N +S +RA + + + + ++ +G+ PI NDT R+ N+R
Sbjct: 569 NDQQNERLSLQRAKAVYD-YLVQEKIEPQRLTFKGYGENKPIAANDTDAHRRQNRRTSFI 627
Query: 182 IF 183
I
Sbjct: 628 IT 629
>gi|82523887|emb|CAI78610.1| peptidoglycan-associated lipoprotein [uncultured delta
proteobacterium]
Length = 184
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 71/178 (39%), Gaps = 6/178 (3%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ L++ I C KK+V + T ++ +AE Q + + +
Sbjct: 12 IVLALSISLLFGAC-----TKKEVAVEDPTMTSQNGEQERLKQLEAERAAQAKAETEAMR 66
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+++ + + L ++ +L+ A L+ + I+ H D GT +
Sbjct: 67 LAKSEMLEKFKNIDIYFEFDKSSLTEEAKLILKEKALFLSANSAKNTTIEGHCDERGTSE 126
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NL + RA +K+YL G+S R I+ + + P+DT + N+R +I
Sbjct: 127 YNLALGDRRAKNVKTYLQGLGISGQRIITTS-YGEEMPVDTGHNETAWAKNRRAHFEI 183
>gi|326572627|gb|EGE22616.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis CO72]
Length = 186
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 69/186 (37%), Gaps = 22/186 (11%)
Query: 1 MIKELGLS-----MFIMTTISGCGLASREKKKVFLHKSND-TDIVNKRFGSSLDKAEDEF 54
M+ + ++ + ++T ++GC S + V + T ++ +D DE
Sbjct: 15 MMLHIQIAAAAAALSVLTFMTGCANKSTSQVMVAPNAPTGYTGVIYTGVAPLVD--NDET 72
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
L T + ++ + +L A L + + +
Sbjct: 73 IKTLASTLPSL-------------VYFDFDSDEIKPQAAAILDEQAQFLTTNQTARVLVA 119
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD G+ + N+ + + RA +++YL+ + + + + F + PI +
Sbjct: 120 GHTDERGSREYNMSLGERRAVAVRNYLLGK-GINQASVEIISFGEERPIAFGTNEEAWSQ 178
Query: 175 NQRIEI 180
N+R E+
Sbjct: 179 NRRAEL 184
>gi|289207752|ref|YP_003459818.1| peptidoglycan-associated lipoprotein [Thioalkalivibrio sp. K90mix]
gi|288943383|gb|ADC71082.1| peptidoglycan-associated lipoprotein [Thioalkalivibrio sp. K90mix]
Length = 188
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 68/179 (37%), Gaps = 2/179 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ +S C +R+ + +R + + E E + +D
Sbjct: 6 RWFFVAMVIGALSACATPTRDAEDAEREAERAAAEEAERERAEREAREAEARALGRDRQF 65
Query: 64 VVSRIGDM-ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ D + ++ +++ ML+ A L++ + ++ HTD GT
Sbjct: 66 DADALDDPDSPLAERLVYFEFDRDEVQSQYMDMLEAHAAYLSQNSGARLRLEGHTDERGT 125
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ NL + + RA ++ ++ +S+ I V + + P+ + N+R+E+
Sbjct: 126 REYNLGLGERRAQSVRR-ILTLNGASDDQIEVISYGEEMPVAFEQNEEAWAKNRRVELV 183
>gi|149910558|ref|ZP_01899197.1| putative peptidoglycan-associated lipoprotein [Moritella sp. PE36]
gi|149806401|gb|EDM66374.1| putative peptidoglycan-associated lipoprotein [Moritella sp. PE36]
Length = 196
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 70/190 (36%), Gaps = 11/190 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSN----DTDIVNKRFGSSLDKAEDEFQM 56
++K L +++ M T++ C + + S N GS +
Sbjct: 8 ILKSLVIALP-MLTLAACSSTTDSTTNDGVESSAQQTVSDTTANGNTGSGSNVIVGSGTD 66
Query: 57 QLQDT--GIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
D+ + V + + + V + + ++ +LQ A L P+ +
Sbjct: 67 VSIDSVENLTVEEVKKQVMDELRKRHVVYFGFDQQAVTAEYGELLQDHANFLIDNPAVKV 126
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I+ H D GT N+ + + RA+ + + S+ IS + + P++T+ T
Sbjct: 127 LIEGHADERGTPGYNIALGERRANAVVK-YLNNLGVSSSQISTVSYGEEKPVNTSHTDAA 185
Query: 172 RQNNQRIEIQ 181
N+R +
Sbjct: 186 FTQNRRAVLV 195
>gi|83748126|ref|ZP_00945154.1| Hypothetical Protein RRSL_01752 [Ralstonia solanacearum UW551]
gi|207739125|ref|YP_002257518.1| outer membrane protein [Ralstonia solanacearum IPO1609]
gi|83725208|gb|EAP72358.1| Hypothetical Protein RRSL_01752 [Ralstonia solanacearum UW551]
gi|206592498|emb|CAQ59404.1| outer membrane protein [Ralstonia solanacearum IPO1609]
Length = 277
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 3/160 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--S 81
+ +V +H + ++ S + + ++ + +
Sbjct: 116 DGTQVAVHGDVQNEAQRQQLASDMATTLGASYTIKNGLRVAAVSEQSLLDQTLANRIIEF 175
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L K +L +A +L + I I HTD+ G+ NL +SQ RA+ +KSYL
Sbjct: 176 ETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHTDNSGSRAMNLNLSQARAETVKSYL 235
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I + + ++ G P+ N T GR N+RIE +
Sbjct: 236 INK-GAEPGTLTAIGVGPDQPVAANTTDEGRSRNRRIEFR 274
>gi|319404756|emb|CBI78357.1| Outer membrane lipoprotein omp16 [Bartonella rochalimae ATCC
BAA-1498]
Length = 168
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 65/184 (35%), Gaps = 29/184 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + + ++ T+ GCG S + +
Sbjct: 12 LAVVLCLLLTLIGCGKKSIDATNSLGQSGYNNAQAG------------------------ 47
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ T + V F +E +L A L ++P I I+ H D GT
Sbjct: 48 ---LSQDFTVNVGDRVFFSLDSSSIESDAEYILARQAEWLLRYPHYSITIEGHADERGTR 104
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ NL + Q RA ++ +LI GVSS R ++ + + P+ D N+R + I
Sbjct: 105 EYNLALGQRRAVAVRDHLISLGVSSQRMNTIS-YGKERPVAVCDNISCWNQNRRAVLVIN 163
Query: 184 PRGN 187
G+
Sbjct: 164 NTGS 167
>gi|294644876|ref|ZP_06722614.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
gi|294808230|ref|ZP_06766993.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
gi|292639770|gb|EFF58050.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
gi|294444557|gb|EFG13261.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
Length = 256
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 4/152 (2%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
N + + L +D D V + G + + L+K+ L
Sbjct: 90 AQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALG 149
Query: 98 LIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+A +LNK + I+ HTD+ K+N +S RA + LI+ + I
Sbjct: 150 KLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQ 209
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+D N+T GR N+R EI + P+
Sbjct: 210 PSGRGEYMPVDDNETIEGRSKNRRTEIIMAPK 241
>gi|237742848|ref|ZP_04573329.1| outer membrane protein [Fusobacterium sp. 4_1_13]
gi|229430496|gb|EEO40708.1| outer membrane protein [Fusobacterium sp. 4_1_13]
Length = 164
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ ++ + I + F++ ++ ML + + K +
Sbjct: 9 NALEINKMEALKEEPPEEMTIVLDDRALNFDFDKSFVKPQYDEMLTNLKEFIMKN-DYEL 67
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I+ HTD I + + N+ +S+ RA+ +K+ LI+ G+ +R +++ + P+ N T G
Sbjct: 68 TIEGHTDYIASNQYNMGLSKRRAEAVKAKLIELGLDPSRIVAIVPKGEEEPVADNKTTEG 127
Query: 172 RQNNQRIEIQIFPRGN 187
R N+R+E ++ RG+
Sbjct: 128 RAKNRRVEFKLVKRGS 143
>gi|114321225|ref|YP_742908.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227619|gb|ABI57418.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 251
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 8/159 (5%)
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVF 87
L +S +D+A + L I V I+ I + F E
Sbjct: 91 ALPESPAPVADPATEEDPVDQAMADELDAL-GDDIDVLVEAGSISFRISDEILFPSGEAE 149
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQ 143
L + L +L + +L + I ++ HTD++ N +S RA + ++
Sbjct: 150 LTDQGLQVLGQLIPVL-EVSDHRITVEGHTDNVPIATERFPSNWELSTGRATRVLR-FLE 207
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ + G A PI N T GR N+R+E+ +
Sbjct: 208 AEGIASTRLQATGLADTRPIAGNATAEGRAQNRRVELVL 246
>gi|296113590|ref|YP_003627528.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis RH4]
gi|295921284|gb|ADG61635.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis RH4]
Length = 171
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 64/173 (36%), Gaps = 17/173 (9%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSND-TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ ++T ++GC S + V + T ++ +D DE L T +
Sbjct: 13 LSVLTFMTGCANKSTSQVMVAPNAPTGYTGVIYTGVAPLVD--NDETIKTLASTLPSL-- 68
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
++ + +L A L + + + HTD G+ + N+
Sbjct: 69 -----------VYFDFDSDEIKPQAAAILDEQAQFLTTNQTARVLVAGHTDERGSREYNM 117
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ + RA +++YL+ + + + + F + PI + N+R E+
Sbjct: 118 SLGERRAVAVRNYLLGK-GINQASVEIISFGEERPIAFGTNEEAWSQNRRAEL 169
>gi|269964125|ref|ZP_06178424.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831140|gb|EEZ85300.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 197
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 69/187 (36%), Gaps = 11/187 (5%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ----LQDTGIVVSRIG 69
IS C ++ + ++ +T N+ D ++ + G + G
Sbjct: 1 MISACSGSNSNRVTGDEYEYIETPNANQIADLIDDDSDGVINARDLCPGTPEGAEIDNDG 60
Query: 70 DMITCYIPV-----HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ ++ F + ++ L ++P+T I +Q +T GT +
Sbjct: 61 CGEYAKSSQEMQIRVLFANDSSEIDPVFAKQISDLSDFLKEYPTTSIELQGYTSITGTDE 120
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
NL +S+ RA+ ++ LI S + + GF T + N+R+ +
Sbjct: 121 YNLALSKRRAESVRQELINN-GISPDRLRIVGFGETNLASTGTDETSHALNRRVTATVVG 179
Query: 185 -RGNIKK 190
+G IKK
Sbjct: 180 YKGEIKK 186
>gi|239813231|ref|YP_002942141.1| hypothetical protein Vapar_0212 [Variovorax paradoxus S110]
gi|239799808|gb|ACS16875.1| type IV / VI secretion system protein, DotU family [Variovorax
paradoxus S110]
Length = 460
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 7/154 (4%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFL 93
T + + + + +++D + V D + F S + ++
Sbjct: 292 QTQRAVAVAPAPQPRLQRFLEPEIRDGLLTVRDEADRSVVVLRGDGLFASGSDRVLDRYA 351
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSN 149
P+L +A LN + + +D +N +SQ RAD +K + R
Sbjct: 352 PVLARVADALNSVEG-NVLVSGFSDDQPIRSVRFPSNWQLSQARADAVKKMIATRVTRPE 410
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R + G P+ ND+ R N+R+E+ +
Sbjct: 411 R-LRAEGRGDADPLVPNDSPANRARNRRVEVTLL 443
>gi|77462842|ref|YP_352346.1| hypothetical protein RSP_2289 [Rhodobacter sphaeroides 2.4.1]
gi|77387260|gb|ABA78445.1| Outer membrane protein, OmpA/MotB family [Rhodobacter sphaeroides
2.4.1]
Length = 525
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 63/184 (34%), Gaps = 14/184 (7%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
++ + + ++ + + NK + + + L V +GD
Sbjct: 344 ALAQVASEQKRRAELEEAERLRLEAENKDLARFRSEFFGQLRQVLAGRE-GVRVVGDRFV 402
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDS-----IG 121
+ L + + + LN+ +I + HTD+ G
Sbjct: 403 FS-SEVLFEPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFG 461
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++N +S RA + ++ Q ++ GF P+ D+ R N+RIE++
Sbjct: 462 AFRDNWELSSARALSVVRFMQQSLGFPPSRLAATGFGEYRPVTPGDSPDARAQNRRIELK 521
Query: 182 IFPR 185
+ R
Sbjct: 522 LTER 525
>gi|162453404|ref|YP_001615771.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161163986|emb|CAN95291.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 263
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 70/174 (40%), Gaps = 10/174 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
++ E ++ L + + + D + +L G+ V + + +P
Sbjct: 77 SSTLEDREKALAEYKARAKQLEAIQARFDLLRKKL-EELVKLGLEVQVRRNRMVISLPGD 135
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFP---STVIAIQSHTDSIGT----LKNNLLISQ 131
V F + L K +L+ I+ ++ + HTDS ++N +S
Sbjct: 136 VLFDSGKDTLSKDGQQILKKISDVIRGDKSLVDRDYQVAGHTDSQPYKSGPFQDNWGLSL 195
Query: 132 ERADVIKSYLIQRGV-SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA + +LI + R S GFA PI +N+T G+Q N+R ++ + P
Sbjct: 196 MRARAVLLFLIGKEGQLPTRHWSAAGFADTDPIASNNTPAGKQKNRRCDLIVLP 249
>gi|126453039|ref|YP_001067883.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|242315370|ref|ZP_04814386.1| ompA family protein [Burkholderia pseudomallei 1106b]
gi|254198619|ref|ZP_04905040.1| ompA family protein [Burkholderia pseudomallei S13]
gi|126226681|gb|ABN90221.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|169655359|gb|EDS88052.1| ompA family protein [Burkholderia pseudomallei S13]
gi|242138609|gb|EES25011.1| ompA family protein [Burkholderia pseudomallei 1106b]
Length = 310
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 150 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 209
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 210 TGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARADAVKGYLV 269
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI ND+ GR N+RIE +
Sbjct: 270 TK-GIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEFR 307
>gi|301063232|ref|ZP_07203781.1| OmpA family protein [delta proteobacterium NaphS2]
gi|300442660|gb|EFK06876.1| OmpA family protein [delta proteobacterium NaphS2]
Length = 214
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
V+ + + +L+ + L +I I HTDS G K N+ +S +RA +K
Sbjct: 108 FDVNSYTIRPESYNLLRELGKALADPRLRDRIIIINGHTDSDGKEKYNVRLSLDRAAAVK 167
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+YLI + + V G+ P+ N +K +Q N+R+EI
Sbjct: 168 TYLIDHCGVAPDRLEVVGYGESMPLTPNTSKENKQLNRRVEIV 210
>gi|207724483|ref|YP_002254880.1| outer membrane protein [Ralstonia solanacearum MolK2]
gi|206589704|emb|CAQ36665.1| outer membrane protein [Ralstonia solanacearum MolK2]
Length = 277
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 3/160 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--S 81
+ +V +H + ++ S + + ++ + +
Sbjct: 116 DGTQVAVHGDVQNEAQRQQLASDMATTLGASYTIKNGLRVAAVSEQSLLDQTLANRIIEF 175
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L K +L +A +L + I I HTD+ G+ NL +SQ RA+ +KSYL
Sbjct: 176 ETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHTDNSGSRAMNLNLSQARAETVKSYL 235
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I + + ++ G P+ N T GR N+RIE +
Sbjct: 236 INK-GAEPGTLTAIGVGPDQPVAANTTDEGRSRNRRIEFR 274
>gi|77360808|ref|YP_340383.1| required for outer membrane integrity, uptake of group A colicins,
and translocation of phage DNA [Pseudoalteromonas
haloplanktis TAC125]
gi|76875719|emb|CAI86940.1| required for outer membrane integrity, uptake of group A colicins,
and translocation of phage DNA [Pseudoalteromonas
haloplanktis TAC125]
Length = 180
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 73/181 (40%), Gaps = 7/181 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M ++ C +S + +N ++ ++ D E Q
Sbjct: 6 ILKGLLIAVPVM-ALAACSSSS----DIDEGAANQSNQGMVEQSTNTDTVEVATISPEQR 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + V + +E K+ +L+ A L + S + I+ H D
Sbjct: 61 AEEQLRQKYEALR-QEQVIYFDFDKATVEGKYADLLRAHAEFLVQNSSVKVLIEGHADER 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + R ++ YL S +SV + + P+ + T+ N+R +
Sbjct: 120 GTPEYNIALGEHRGQAVEKYLQSL-GVSASQMSVVSYGEEKPMVKSRTESAFAKNRRAVL 178
Query: 181 Q 181
Sbjct: 179 V 179
>gi|126461734|ref|YP_001042848.1| hypothetical protein Rsph17029_0965 [Rhodobacter sphaeroides ATCC
17029]
gi|126103398|gb|ABN76076.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 525
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 63/184 (34%), Gaps = 14/184 (7%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
++ + + ++ + + NK + + + L V +GD
Sbjct: 344 ALAQVASEQKRRAELEEAERLRLEAENKDLARFRSEFFGQLRQVLAGRE-GVRVVGDRFV 402
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDS-----IG 121
+ L + + + LN+ +I + HTD+ G
Sbjct: 403 FS-SEVLFEPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFG 461
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++N +S RA + ++ Q ++ GF P+ D+ R N+RIE++
Sbjct: 462 AFRDNWELSSARALSVVRFMQQSLGFPPSRLAATGFGEYRPVTPGDSPDARAQNRRIELK 521
Query: 182 IFPR 185
+ R
Sbjct: 522 LTER 525
>gi|254489078|ref|ZP_05102282.1| OmpA/MotB domain protein [Roseobacter sp. GAI101]
gi|214042086|gb|EEB82725.1| OmpA/MotB domain protein [Roseobacter sp. GAI101]
Length = 416
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKFLPMLQLIATILN 104
L++ + Q ++ D + V + IT + ++ L+ F L+ +A L+
Sbjct: 271 QLNRVKGFLQKEISDGIVEVFQDQQTITVRLAGSNMFGSGSDRLQPAFEEPLRKVAQALD 330
Query: 105 KFPSTVIAIQSHTDSIGTLKNNL----LISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ VI + H+D+I + +S RA+ + L + S+R + G A K
Sbjct: 331 ETEGPVIVV-GHSDNIPIKSSRFPSNERLSLARAEAVMRTLEGKLAKSDR-LEAEGRAEK 388
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRGN 187
PI N T+ GR N+RIEI + +
Sbjct: 389 QPIADNSTREGRAKNRRIEIVLVRKDT 415
>gi|194291785|ref|YP_002007692.1| outer membrane protein; ompa/motb domain [Cupriavidus taiwanensis
LMG 19424]
gi|193225689|emb|CAQ71635.1| putative outer membrane protein; OmpA/MotB domain [Cupriavidus
taiwanensis LMG 19424]
Length = 272
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 6/161 (3%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHV 80
+ +V +H + ++ S + A Q G+ V + +
Sbjct: 112 DGTQVSVHGDVRNEAQRQQIASDM--ATGLGQSYTVKNGLRVPASEQNLLDQTLANRIIE 169
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L K +L +A +L + I I HTD+ G+ NL +SQ RA+ +K+Y
Sbjct: 170 FETGAATLTPKGRAILDEMAAVLPRLSGRKIEIVGHTDNSGSRALNLTLSQARAETVKNY 229
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
LI +G ++ G P+ ND + GR N+RIE +
Sbjct: 230 LIGKGGEPG-MLTAVGVGPDQPVAPNDKEEGRAKNRRIEFR 269
>gi|302185388|ref|ZP_07262061.1| flagellar motor protein MotD [Pseudomonas syringae pv. syringae
642]
Length = 296
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 59/170 (34%), Gaps = 6/170 (3%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K+ + + + D F ++ + V I + + F
Sbjct: 84 KESEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSMLFGSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K +++ +A I+ +F I ++ TD N +S R+ I
Sbjct: 144 DAMPSDKAFTIIEKVAGIVKRF-DNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVRM 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L + ++ G+ PI N + GR N+R+ + I ++++
Sbjct: 203 LAAMDGVNPARLASVGYGEFQPIAPNTSTAGRAKNRRVVLVISRNLDVRR 252
>gi|33595424|ref|NP_883067.1| hypothetical protein BPP0729 [Bordetella parapertussis 12822]
gi|33599804|ref|NP_887364.1| hypothetical protein BB0815 [Bordetella bronchiseptica RB50]
gi|33565502|emb|CAE40138.1| putative outer membrane protein [Bordetella parapertussis]
gi|33567401|emb|CAE31314.1| putative outer membrane protein [Bordetella bronchiseptica RB50]
Length = 426
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIA 112
Q +++D + V D + F S + ++ P+L +A L + I
Sbjct: 278 LQPEVRDRLVTVRDEVDRSVVVLRGDGLFESGAVAVRDRYAPVLARVAEALGQTRG-DIV 336
Query: 113 IQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++ +TD++ +N +SQ RA+ +K+ + R + R + G P+ NDT
Sbjct: 337 VRGYTDNVPIRTARFPSNWHLSQARAEAVKAVIDARLGQAGR-VRAEGRGEADPLAPNDT 395
Query: 169 KVGRQNNQRIEIQIF 183
GR N+R+EI +
Sbjct: 396 PAGRSVNRRVEITVM 410
>gi|326559589|gb|EGE10003.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis 7169]
gi|326562671|gb|EGE12973.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis
103P14B1]
gi|326564691|gb|EGE14909.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis
46P47B1]
gi|326565509|gb|EGE15680.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis
12P80B1]
gi|326567731|gb|EGE17837.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis BC1]
gi|326568633|gb|EGE18704.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis BC7]
gi|326574224|gb|EGE24172.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis
101P30B1]
gi|326575009|gb|EGE24938.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis O35E]
Length = 171
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 64/173 (36%), Gaps = 17/173 (9%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSND-TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ ++T ++GC S + V + T ++ +D DE L T +
Sbjct: 13 LSVLTFMTGCANKSTSQVMVAPNAPTGYTGVIYTGVAPLVD--NDETVKALASTLPSL-- 68
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
++ + +L A L + + + HTD G+ + N+
Sbjct: 69 -----------VYFDFDSDEIKPQAAAILDEQAQFLTTNQTARVLVAGHTDERGSREYNM 117
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ + RA +++YL+ + + + + F + PI + N+R E+
Sbjct: 118 SLGERRAVAVRNYLLGK-GINQASVEIISFGEERPIAFGTNEEAWSQNRRAEL 169
>gi|254511081|ref|ZP_05123148.1| flagellar motor protein [Rhodobacteraceae bacterium KLH11]
gi|221534792|gb|EEE37780.1| flagellar motor protein [Rhodobacteraceae bacterium KLH11]
Length = 559
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 14/160 (8%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ + + L V GD + L + +
Sbjct: 402 AQAEDLQRYRSEFFGRLRDVL-GDQEGVRIEGDRFVFS-SEVLFDTGSAVLSLEGREEVA 459
Query: 98 LIATILNKFP-------STVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRG 145
+A IL + VI + HTD++ G ++N +SQ RA + Y++
Sbjct: 460 KVANILRAVAAEIPEGLNWVIRVDGHTDNVPLAGSGRYRDNWELSQGRALSVVRYMVDAL 519
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ GF P++ DT R N+RIE+++ R
Sbjct: 520 GIPPNRLAANGFGEFQPVNPADTPDARAQNRRIELKLTER 559
>gi|92113628|ref|YP_573556.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
gi|91796718|gb|ABE58857.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
Length = 283
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G+VV++ + I H+ F S L + +L+ + L F I I+ HTDS
Sbjct: 150 DGVVVTQSAQGLNFRIENHLLFSSSQADLTDEGRAVLRQLLDSLRAF-DGEITIEGHTDS 208
Query: 120 IGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ N +S RA + +L+ + + G+A P+ +ND+ GR N
Sbjct: 209 RPIATDRFPSNWELSTARATAVLRFLVGE-GLDSEALRAVGYADTRPLQSNDSAEGRAAN 267
Query: 176 QRIEIQI 182
+R+E+ +
Sbjct: 268 RRVELVL 274
>gi|294783612|ref|ZP_06748936.1| outer membrane protein [Fusobacterium sp. 1_1_41FAA]
gi|294480490|gb|EFG28267.1| outer membrane protein [Fusobacterium sp. 1_1_41FAA]
Length = 141
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ ML + + + + + I+ HTDS+G+ + N+ +S+
Sbjct: 29 IVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQN-NYELTIEGHTDSVGSNQYNIGLSR 87
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA+ +K+ LI+ G+ +R + + +YP+ TN+T GR N+R+E ++ R
Sbjct: 88 RRAEAVKAKLIEFGLPEDRIVGIEAKGEEYPVATNETPEGRLQNRRVEFRLVQR 141
>gi|167740993|ref|ZP_02413767.1| OmpA family protein [Burkholderia pseudomallei 14]
Length = 558
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 439 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 498
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 499 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 545
>gi|56460187|ref|YP_155468.1| peptidoglycan-associated lipoprotein [Idiomarina loihiensis L2TR]
gi|56179197|gb|AAV81919.1| Peptidoglycan-associated lipoprotein [Idiomarina loihiensis L2TR]
Length = 178
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/182 (13%), Positives = 61/182 (33%), Gaps = 11/182 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLAS-REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
++K L + + + T ++ C + + N + + + Q
Sbjct: 6 LLKALAIVVPMAT-LAACSSNQETDSGMGAGQEINQQAEQDSGVEVGAADRAQRMEEERQ 64
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + + + ++ ++ +L A L K PS + I+ HTD
Sbjct: 65 QKMEALRKE--------HIVYFAFDKSNVQSEYTDLLSAHADYLVKNPSVKVVIEGHTDE 116
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N+ + + RA + + + S + + P+ + N+R
Sbjct: 117 RGTPEYNIALGERRAKAV-ESYLHNLGVQDSQTSTVSYGEEKPMVNGSNERAYAKNRRAV 175
Query: 180 IQ 181
+
Sbjct: 176 LV 177
>gi|315605392|ref|ZP_07880435.1| OmpA family protein [Actinomyces sp. oral taxon 180 str. F0310]
gi|315312961|gb|EFU61035.1| OmpA family protein [Actinomyces sp. oral taxon 180 str. F0310]
Length = 184
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 3/152 (1%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLE 89
+ + + + E + + D + + D + V+F L
Sbjct: 32 PGVDYSGPQSNPQVVYPEPVEVLYSVGTTDGAVSTKQKKDTTITTLSGDVNFEVDSDQLT 91
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ +L +A+ +K + +++ HTDS+ +NL +S+ RA + YL + +
Sbjct: 92 ARAREILDSLASEWSKTKPSKVSVTGHTDSVADDAHNLDLSKRRAKAVGDYLASKVPGLS 151
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I+ G PI N+T GR N+R+EI+
Sbjct: 152 --ITTDGKGEAEPIADNETDEGRAQNRRVEIR 181
>gi|298735871|ref|YP_003728396.1| peptidoglycan-associated lipoprotein [Helicobacter pylori B8]
gi|298355060|emb|CBI65932.1| peptidoglycan-associated lipoprotein [Helicobacter pylori B8]
Length = 179
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 60/184 (32%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + + +GC K + + +K E + +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSTKTVQTAPVTTEPAPEKEEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCAQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|152982971|ref|YP_001354367.1| outer membrane protein A precursor [Janthinobacterium sp.
Marseille]
gi|151283048|gb|ABR91458.1| outer membrane protein A precursor [Janthinobacterium sp.
Marseille]
Length = 206
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 69/203 (33%), Gaps = 22/203 (10%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF------------------ 43
+ +L +F + I ++ K S N
Sbjct: 1 MNKLAKLVFAASAIVAMSAQAQTDIKASTPNSAYAQATNGTIVRNSTGLCWHTGYWTPAD 60
Query: 44 ---GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
G VV + + L+ + L +
Sbjct: 61 SVPGCDGALVAAAAPAPASPAPAVVPVPTSEKVTFAADAFFDFDKAVLKPEGKAKLDDLT 120
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ LN VI HTDS+G+ N +S RA+ +K+YL+ +GV + R + G K
Sbjct: 121 SKLNGLNLEVIIAVGHTDSVGSDAYNQKLSVRRAEAVKAYLVGKGVDAKRVYT-EGKGEK 179
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P+ TN T GR N+R+EI++
Sbjct: 180 QPVATNKTAAGRAQNRRVEIEVV 202
>gi|134095751|ref|YP_001100826.1| putative outer membrane protein 3a (II*;G;d) [Herminiimonas
arsenicoxydans]
gi|133739654|emb|CAL62705.1| Putative outer membrane protein OmpA [Herminiimonas arsenicoxydans]
Length = 205
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ L+ L +A+ L VI HTDSIG+ N +S RA+ +K YL+ +
Sbjct: 104 KAVLKPDGKAKLDDLASKLKDLNLEVIIAVGHTDSIGSDAYNQKLSIRRAEAVKGYLVGK 163
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + G K P+ TN T GR N+R+EI++
Sbjct: 164 -GIDAKRVYTEGKGEKQPVATNKTAAGRAQNRRVEIEVV 201
>gi|239979676|ref|ZP_04702200.1| secreted protein [Streptomyces albus J1074]
Length = 186
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 3/169 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + S + + + + + ++ + +
Sbjct: 5 GSTTSSPPPEISEDSAGLKLADGAELAPPKVLDIKSVVEDLGGEERREDTNTDVKFALQA 64
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V F L + +Q IA + + + TD +G+ ++ +S+ RAD +
Sbjct: 65 EVLFGKDSAKLNPEARGRIQAIAEEAQAQQANKVRVFGFTDDLGSYEHGKKLSKNRADAV 124
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
L++ N VRG++ YPI N T+ GR N+R+E+ FPRG
Sbjct: 125 HEELVKTLGP-NVTYEVRGYSEDYPIADNSTEAGRMKNRRVEVS-FPRG 171
>gi|213964216|ref|ZP_03392450.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sputigena
Capno]
gi|213953135|gb|EEB64483.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sputigena
Capno]
Length = 919
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E ++D + + L + L+ I IL +P
Sbjct: 785 EAHLVKLIEDKSLTTPEQFKDNWITLDRTYFKTGSDELTEGSEQQLKNIVAILKAYPKAA 844
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTK 169
I + +TD+ G+ + NL +S+ RA+ + + L+ ++ +S +G+ ++P+ NDT
Sbjct: 845 IRLGGYTDNTGSAEGNLKLSERRANSVLNKLVAL-GANKAQLSAQGYGQEHPVCPANDTD 903
Query: 170 VGRQNNQRIEIQIFPR 185
+ N+RI+I++ +
Sbjct: 904 ECKAKNRRIDIRLTAK 919
>gi|328958273|ref|YP_004375659.1| uncharacterized protein YtxE [Carnobacterium sp. 17-4]
gi|328674597|gb|AEB30643.1| uncharacterized protein YtxE [Carnobacterium sp. 17-4]
Length = 205
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 63/171 (36%), Gaps = 7/171 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSL-DKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
+ E + + ++ + ++ + V D I I
Sbjct: 30 SIKDTETEPSEDITAAPSEDSLDPELIKMYNEVVAFLEANEMTAQASVEYDQDGIYVNIQ 89
Query: 78 VHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQE 132
+ F + + L ++ ++ +F + + ++ +TD + +N +S
Sbjct: 90 ESILFGSGSAIIAESGESTLNGLSDLIQQFEN-DVVVEGYTDDVPMNNSIFSSNWELSTG 148
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + YL + +S +G+ +PI ND++ ++ N+R+ I +
Sbjct: 149 RALSVLRYLSEERSVDPTRLSAKGYGEYHPISPNDSEENKEKNRRVNIVLV 199
>gi|257125599|ref|YP_003163713.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
gi|257049538|gb|ACV38722.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
Length = 256
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 74/172 (43%), Gaps = 16/172 (9%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM---------------ITCYI 76
+ K + + + +++++ + + + IT
Sbjct: 86 GGTQPEQSPKSQDQDVISQQQGIRSEIKESASLDTNTQENSINNPQKVQILKSEIITLRA 145
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + L+++ +L+ I + + +++I +TD G N +S RA+
Sbjct: 146 EDLNFHKNSINLKEEAYSVLKDIKNYIEEN-DYLVSIVGYTDESGIAAYNNRLSLRRAEK 204
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ S L++ G+S +R + + G PI++N+TK GR+ N+R+E + +G I
Sbjct: 205 VSSKLLELGLSKDRILDLIGRGENNPINSNETKEGRERNRRVEFRFIKKGQI 256
>gi|114765948|ref|ZP_01444962.1| hypothetical protein 1100011001347_R2601_22192 [Pelagibaca
bermudensis HTCC2601]
gi|114541762|gb|EAU44800.1| hypothetical protein R2601_22192 [Roseovarius sp. HTCC2601]
Length = 360
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I L + +P+L+ + ++++ P I I HTDS G+ NL +S
Sbjct: 248 EILSRAGNIYFGAGSARLSAESVPLLENLYDVVSRCPDLKIEIAGHTDSDGSDAANLRLS 307
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ RA +K YL +G+ +R + V G+ P+ N + + N+RIE
Sbjct: 308 ELRAASVKEYLQGKGIPESRML-VVGYGEAQPLLENTSAANKARNRRIEF 356
>gi|118475629|ref|YP_892653.1| Omp18 [Campylobacter fetus subsp. fetus 82-40]
gi|118414855|gb|ABK83275.1| Omp18 [Campylobacter fetus subsp. fetus 82-40]
Length = 173
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 68/187 (36%), Gaps = 18/187 (9%)
Query: 2 IKELGL--SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K L L ++ I+GC S E + + +
Sbjct: 1 MKNLVLVSAVAAALFIAGCSSKSPE-------------VDMNADANKMSNNNGMSNTDTM 47
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHT 117
++ + + I + + + ++ A++ N+ S I ++ +
Sbjct: 48 SDAERLNALMNQIQSQVKNVYFDFDKFNIRPDMQGVVGTNASLFNQNGADSLRIMVEGNC 107
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ + N + +RA K L+ +GVS++R I + P+ T TK N+R
Sbjct: 108 DEWGSDEYNYALGVKRAKTAKDALVAQGVSADR-IEITSNGESKPVCTERTKACDAQNRR 166
Query: 178 IEIQIFP 184
E +I P
Sbjct: 167 DEFKILP 173
>gi|86750700|ref|YP_487196.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86573728|gb|ABD08285.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 451
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ + + + LP+L+ +A ++ P+ I + HTD+ G
Sbjct: 332 VEACQSKLSTLVAAQKINFMRGSAEIAQASLPVLKQLAEVIAHCPAATIEVAGHTDAAGK 391
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA+ + + + + ++ G+ P+ ND+ GR N+RIE +
Sbjct: 392 KAANEALSKRRAEAVADN-LTKAGIGSAKLTAVGYGASKPLAANDSADGRAKNRRIEFVV 450
>gi|213963879|ref|ZP_03392126.1| immunogenic 75 kDa protein PG4 [Capnocytophaga sputigena Capno]
gi|213953469|gb|EEB64804.1| immunogenic 75 kDa protein PG4 [Capnocytophaga sputigena Capno]
Length = 658
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 7/162 (4%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
K G+ AE I V + I +
Sbjct: 497 KSEKEAYKSGQQSIALNGNQKVTAEVLLTPIPATPKIAVGTDLAKV-LKIENIYFDYDKA 555
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ K L I I+ ++P+ + ++ HTDS G+ K NL +S+ RA +++
Sbjct: 556 NIRKDAAEQLAKIVAIMKEYPTMKVDVRLHTDSRGSDKYNLALSERRAKSTIKWIVS-HG 614
Query: 147 SSNRFISVRGFAYKYPI--DTND---TKVGRQNNQRIEIQIF 183
I+ +G+ + +N T+ Q N+R E I
Sbjct: 615 IKKNRITGKGYGETQLVNGCSNGVPCTEEEHQANRRSEFIIV 656
>gi|78189006|ref|YP_379344.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like [Chlorobium chlorochromatii CaD3]
gi|78171205|gb|ABB28301.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like protein [Chlorobium chlorochromatii
CaD3]
Length = 183
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 60/182 (32%), Gaps = 3/182 (1%)
Query: 2 IKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K L L + + C + + K + +
Sbjct: 1 MKRLLRSLFIPATLLLGACCIEDDIVVAPAAVPAPVAVPAPKPTPAPAVVVVPAPVAVVV 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ ++ + ++ L L+ A + P++ I I+ H D
Sbjct: 61 VAPVPPPLPKPIVLPALVDVFFDFNKSELGTTRNEQLKRNANWIKAHPTSNIIIEGHCDE 120
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N+ + + RA+ K Y++ GV R ++ + + P+ T+ N+R+
Sbjct: 121 RGTNEYNIALGERRANSAKDYMVTLGVDPAR-LTTVSYGEEKPVAIGSTEEAWAQNRRVH 179
Query: 180 IQ 181
Sbjct: 180 FI 181
>gi|313206839|ref|YP_004046016.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868]
gi|312446155|gb|ADQ82510.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868]
gi|315023913|gb|EFT36915.1| putative flagellar motor protein MotB [Riemerella anatipestifer
RA-YM]
Length = 278
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 56/136 (41%), Gaps = 6/136 (4%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ D + V + ++ + + + + + +L +A ++N + + I+
Sbjct: 128 DNVADQDVQVKVLKGVVMISLSDKMLYRSGDYNILPAAQEVLGKVAKVINDYDKYSVLIE 187
Query: 115 SHTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+TD++ K+N +S RA + L + I+ G + P TN +
Sbjct: 188 GNTDNVPLNSASLPKDNWDLSALRATSVAKVLQNQFGVDPSRITAGGRSEYNPKATNMSV 247
Query: 170 VGRQNNQRIEIQIFPR 185
GR N+R EI I P+
Sbjct: 248 SGRAENRRTEIIIMPK 263
>gi|89891334|ref|ZP_01202840.1| chemotaxis motB protein, OmpA family [Flavobacteria bacterium
BBFL7]
gi|89516365|gb|EAS19026.1| chemotaxis motB protein, OmpA family [Flavobacteria bacterium
BBFL7]
Length = 289
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 5/133 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ D I V+ ++ I + F S + +L + TIL + + I+ H
Sbjct: 135 VNDEDINVNVEKGVVFISINDKLLFASGSDQINSNAYTVLGKVGTILKDKANMEVMIEGH 194
Query: 117 TDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TDS K+N +S RA I YL ++ ++ G +Y PI +NDT GR
Sbjct: 195 TDSQPIASANFKDNWDLSTARAAAITRYLQEKEQIDPARMTAAGRSYYVPIASNDTAEGR 254
Query: 173 QNNQRIEIQIFPR 185
N+R I I P+
Sbjct: 255 AKNRRTRIIILPK 267
>gi|332557731|ref|ZP_08412053.1| hypothetical protein RSWS8N_01730 [Rhodobacter sphaeroides WS8N]
gi|332275443|gb|EGJ20758.1| hypothetical protein RSWS8N_01730 [Rhodobacter sphaeroides WS8N]
Length = 525
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 63/184 (34%), Gaps = 14/184 (7%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
++ + + ++ + + NK + + + L V +GD
Sbjct: 344 ALAQVASEQKRRAELEEAERLRLEAENKDLARFRSEFFGQLRQVLAGRE-GVRVVGDRFV 402
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDS-----IG 121
+ L + + + LN+ +I + HTD+ G
Sbjct: 403 FS-SEVLFEPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFG 461
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++N +S RA + ++ Q ++ GF P+ D+ R N+RIE++
Sbjct: 462 AFRDNWELSSARALSVVRFMQQSLGFPPSRLAATGFGEYRPVTPGDSPDARAQNRRIELK 521
Query: 182 IFPR 185
+ R
Sbjct: 522 LTER 525
>gi|332305765|ref|YP_004433616.1| peptidoglycan-associated lipoprotein [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332173094|gb|AEE22348.1| peptidoglycan-associated lipoprotein [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 185
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 64/177 (36%), Gaps = 3/177 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ K + L++ I+T ++ S E+ ++ R + L
Sbjct: 6 IFKGITLALPIVTMVACSSGPSEEELAAERNRVAAAQAEADRKAEEAKVQAGNMKPML-- 63
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V + V + K+ +L A L K P + I+ H DS
Sbjct: 64 SPEEVMQKEKSALMDDQVVYFDFDRSSVGSKYYALLDQHAAFLVKNPGQSVVIEGHCDSR 123
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + + RA + + S +SV + + PIDT+ T N+R
Sbjct: 124 GTPEYNIALGERRAKSV-ETYLMNAGVSASQVSVVSYGEEKPIDTSGTTAAFAENRR 179
>gi|255533611|ref|YP_003093983.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255346595|gb|ACU05921.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 440
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY-IPVHVSFVSEVFLEKKFLPMLQL 98
G +D + ++ I+++ + I + + + +K L
Sbjct: 298 GTPAGVVVDGSGCPLKVPAPVEKIIITEADRKVVADAIKNLEFDLGKATIRQKSYATLNR 357
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A +L + + + + HTD+ G+ N+ +S++RA+ +K+YL+ +G +++R I G+
Sbjct: 358 VAELLIQ-KNFSLKLAGHTDNTGSAALNMRLSKDRAESVKAYLVSQGANASR-IEATGYG 415
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
PI +N T GRQ N+R+E +
Sbjct: 416 MNQPIASNKTAAGRQQNRRVEFTL 439
>gi|262198395|ref|YP_003269604.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262081742|gb|ACY17711.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 193
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 6/177 (3%)
Query: 15 ISGCGLASR---EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM 71
++GC E + + + + E E + + + D
Sbjct: 17 LAGCAKNQTRICEPLNSWSAPAFRCVPRAEVEPEPEPEPEPEVEPEPEPEPERAVLRDDR 76
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLIS 130
I + + L ++ +L +A I+ P I ++ HTDS G NL +S
Sbjct: 77 IEI-MQQVQFEFGKAVLLEESKSLLDEVAAIMRDNPQIAKIRVEGHTDSKGKANFNLRLS 135
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ERA +++YLI +GV+ NR + RGF PID+NDT GR N+R+E I R +
Sbjct: 136 RERAASVRAYLISQGVAGNRLV-ARGFGMTKPIDSNDTDDGRARNRRVEFNIVSRDD 191
>gi|182680300|ref|YP_001834446.1| peptidoglycan-associated lipoprotein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182636183|gb|ACB96957.1| peptidoglycan-associated lipoprotein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 172
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 57/174 (32%), Gaps = 22/174 (12%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+LG + + ++ C + + S
Sbjct: 11 KLGAVLGVALAMAACAKNPADDPTALAGYGANGGRGGAASPGSPQDFA------------ 58
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+GD + L + L A L ++ I+ H D GT
Sbjct: 59 --VNVGDRV-------FFESDSSELTQTAQATLDKQAHWLQQYGRYTFTIEGHADERGTR 109
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N + RA+ K+YL+ RG++++R ++ + + P+ T D N+R
Sbjct: 110 EYNFALGARRAEAAKNYLVARGIATSRLRTIS-YGKERPVATCDDISCWSQNRR 162
>gi|328470357|gb|EGF41268.1| hypothetical protein VP10329_06152 [Vibrio parahaemolyticus 10329]
Length = 225
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 73/208 (35%), Gaps = 29/208 (13%)
Query: 2 IKELGLSMFIMTTISGCGL--------------ASREKKKVFLHK---SNDTDIVNKRFG 44
+K + + +SGC A + ++ + ++ + +
Sbjct: 18 MKHWFFIVCGI--LSGCSSLNPDMVPGGNMLDTAPKTNTELRHPEWGYASASHVSTAPRV 75
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRI--------GDMITCYIPVHVSFV-SEVFLEKKFLPM 95
+ + +A ++ + + + R G + + V F L
Sbjct: 76 NQMARAAEKKSNNVTSLEMFLDRHNIPHETIGGGHLMIRLKEQVHFQTGSAQLSSNSQDW 135
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L+ + L + I H DS G N +S++RA ++ ++ + R S R
Sbjct: 136 LRKLGHYLAGRTDVDVVIDGHADSTGAASFNDTLSEKRAREVEKQMLASSIPRQRVFS-R 194
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
GF P +N T G+ N+R+E+ +
Sbjct: 195 GFGEYVPQCSNATSSGKACNRRVELMLI 222
>gi|282880441|ref|ZP_06289148.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
gi|281305544|gb|EFA97597.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
Length = 298
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 65/141 (46%), Gaps = 12/141 (8%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +L++ + V + ++ + ++ + + + + L IA I+ + + +
Sbjct: 143 REELKE--VDVQVLKGVVYISLADNMLYKTASYEINDRAAETLSKIAKIIMDYKEYDVLV 200
Query: 114 QSHTDSIGTL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ +TD++ +NN +S RA + YL + + ++ G P+
Sbjct: 201 EGNTDNVPVNPNSPLMKNIRNNWDLSTLRASSVVQYLQKNYGVDPKRMTAGGRGEYNPLT 260
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
+N+T++GRQ N+R +I I P+
Sbjct: 261 SNNTELGRQRNRRTQIIITPK 281
>gi|254487597|ref|ZP_05100802.1| OmpA family domain protein [Roseobacter sp. GAI101]
gi|214044466|gb|EEB85104.1| OmpA family domain protein [Roseobacter sp. GAI101]
Length = 312
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 66/172 (38%), Gaps = 4/172 (2%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
++ + V + ++ + D E + +V +
Sbjct: 142 AVTVLASTAATSAYVQIIQARSLSDTAAEPTGAADTQVAEIRQPDALAATLV----NTGR 197
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ L + L +A L P+ +A+ HTD++G L++N+ +S+ R
Sbjct: 198 VVLSSLEFETGTSGLGPAKVAALDSLAAFLAGDPALRVALVGHTDTVGGLEDNVALSRSR 257
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
A ++ LI S + +G Y PI +N T GR+ N+R+E + P
Sbjct: 258 AASVRQRLIDAYGVSPDQLEAQGMGYLAPIASNLTAQGREANRRVEAVLLPE 309
>gi|254182964|ref|ZP_04889557.1| OmpA family protein [Burkholderia pseudomallei 1655]
gi|184213498|gb|EDU10541.1| OmpA family protein [Burkholderia pseudomallei 1655]
Length = 558
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 439 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 498
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 499 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 545
>gi|124007750|ref|ZP_01692453.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123986872|gb|EAY26644.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 274
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 52/101 (51%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L++K +L +A + +FP I + HT +IGT NL +S++RA+ ++ Y
Sbjct: 168 FKLGSDELDEKSKALLDSVAQKMMEFPEAEIEVSGHTCNIGTKAGNLRLSKKRAEAVRKY 227
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L++ + I G+A P+ N + R+ N+R+ +
Sbjct: 228 LMEYDGIDPKRIKTAGYADNRPLVPNINEPNRKKNRRVAFK 268
>gi|157889006|dbj|BAF80954.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 63/148 (42%), Gaps = 2/148 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
K+ + + G ++ IG T + + F ++ + +
Sbjct: 176 APKTPQTTTKQIEEKPQAKQIDKSCPEPRKGALLDHIGCEKTIALEGYFGF-DQISINPE 234
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F +Q + +L + P ++ HTDS G+ N +S ERA + +++ +
Sbjct: 235 FAQKIQEVGKVLEENPQYYTILEGHTDSTGSKVYNQKLSLERAKAVAKE-LEKSGVAKEK 293
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
I+ +G+ + P +NDTK GR N+R+E
Sbjct: 294 IAAKGYGFDKPKASNDTKEGRAQNRRVE 321
>gi|126665356|ref|ZP_01736338.1| flagellar motor protein MotB [Marinobacter sp. ELB17]
gi|126629984|gb|EBA00600.1| flagellar motor protein MotB [Marinobacter sp. ELB17]
Length = 313
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQL 98
++ L++ + L D I V++ I + SF L +F +L
Sbjct: 125 QEKIQEQLEQLRKVLEPALNDGRIAVTQEQHRIVIRVEEKGSFPSGSAKLTWEFESLLLE 184
Query: 99 IATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
IA +L P + I+ HTD++ +N +S RA + + L+ G ++V
Sbjct: 185 IAEVLASIPG-ELTIEGHTDNVPISTDRFYSNWDLSAARAASVANALLASGTVEPDRLAV 243
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+G A ND+ R N+R+EI I
Sbjct: 244 KGLADTAARVDNDSAENRAKNRRVEIII 271
>gi|33600833|ref|NP_888393.1| putative lipoprotein [Bordetella bronchiseptica RB50]
gi|33568433|emb|CAE32345.1| putative lipoprotein [Bordetella bronchiseptica RB50]
Length = 200
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 13/182 (7%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGD 70
S +A K + T + K S D + Q+ G+ V + D
Sbjct: 20 SSGSMAQEPPYKSTILGLQATILDLKGLPSDTDGGISDLSAQVGALAARHEGVSVRQGKD 79
Query: 71 MITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+T + V F + + P LQ IA ++ + ++AI+ HTDS G+ N +
Sbjct: 80 AVTIAMMGDVLFDFDKADILAAAEPTLQDIAKLIKSPATGIVAIEGHTDSKGSDSYNKGL 139
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQIF 183
S RA + + +SVRG P+ N D GR N+R+E +
Sbjct: 140 SLRRAQAVAQ-WLGAHGVDAAKLSVRGLGAARPVQPNQLANGADNPQGRAQNRRVEFVLP 198
Query: 184 PR 185
R
Sbjct: 199 NR 200
>gi|242313779|ref|ZP_04812796.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|242137018|gb|EES23421.1| OmpA family protein [Burkholderia pseudomallei 1106b]
Length = 558
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 439 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 498
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 499 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 545
>gi|217423098|ref|ZP_03454600.1| OmpA family protein [Burkholderia pseudomallei 576]
gi|217394006|gb|EEC34026.1| OmpA family protein [Burkholderia pseudomallei 576]
Length = 558
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 439 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 498
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 499 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 545
>gi|170722824|ref|YP_001750512.1| flagellar motor protein MotD [Pseudomonas putida W619]
gi|169760827|gb|ACA74143.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 285
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K + + D D F ++ + + + + + F
Sbjct: 84 KDSEQTDAGLAQNSVDPLKTISDDVRDAFGDLIKSDQMTIRGNELWVEIELNSSLLFGSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K +++ +A IL F + + ++ TD++ N +S RA I
Sbjct: 144 DAMPSDKAFDIIEKVANILKPFAN-PVHVEGFTDNLPIRTAQYPTNWELSSARAASIVRL 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV+ R SV G+ P+ NDT GR N+R+ + I +++
Sbjct: 203 LAMEGVNPARMASV-GYGEYQPVAGNDTAEGRARNRRVVLVISRNLEVRR 251
>gi|237509510|ref|ZP_04522225.1| OmpA family membrane protein [Burkholderia pseudomallei MSHR346]
gi|235001715|gb|EEP51139.1| OmpA family membrane protein [Burkholderia pseudomallei MSHR346]
Length = 558
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 439 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 498
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 499 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 545
>gi|27804808|gb|AAO22853.1| outer membrane protein A-like protein [Myxococcus xanthus]
Length = 241
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS-HTDSIGTL 123
V D + + ++ ++K+ +L +A ++ + P + + HTD G
Sbjct: 112 VEIRPDRLVV-MGKVFFEPTQARIQKRSYELLDWVARVIREHPEIPLVVVGAHTDDRGFP 170
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +SQ RA+ ++ YLI R ++ R + G+ + PID+N T GR+NN+R+E +
Sbjct: 171 DDNRRLSQGRAEAVRQYLIGRDIAPER-LKALGYGQERPIDSNATSNGRENNRRVEFLL 228
>gi|163786302|ref|ZP_02180750.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein-like protein [Flavobacteriales bacterium
ALC-1]
gi|159878162|gb|EDP72218.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein-like protein [Flavobacteriales bacterium
ALC-1]
Length = 524
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 47/108 (43%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++ + L +++ I+ +L + S + I HTD+ G NL +S+ R
Sbjct: 415 ISTNGILFDSGSANIQPQSLGIVRQISQVLMQDESIKLNIIGHTDADGPDDANLKLSKAR 474
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
A +K LI S ++ G P+ N T G+ N+R+E
Sbjct: 475 AAAVKDVLINIYKISADRLTTDGKGETQPVGDNKTTDGKAQNRRVEFV 522
>gi|262403402|ref|ZP_06079961.1| outer membrane protein A precursor [Vibrio sp. RC586]
gi|262350394|gb|EEY99528.1| outer membrane protein A precursor [Vibrio sp. RC586]
Length = 332
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V + V ++F+ L I+++L +P + HTDS G+ N IS+ RA +
Sbjct: 222 VGLFGFDSVEPSQEFIDQLTEISSVLISYPQAQAKVVGHTDSTGSALYNQNISEHRAQAV 281
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ LI+ + + RG P+ N+T GR N+R+EI I
Sbjct: 282 VNKLIEL-GVTPTQLEWRGEGEFQPVADNNTAEGRAANRRVEITI 325
>gi|254195556|ref|ZP_04901984.1| OmpA family protein [Burkholderia pseudomallei S13]
gi|169652303|gb|EDS84996.1| OmpA family protein [Burkholderia pseudomallei S13]
Length = 558
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 439 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 498
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 499 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 545
>gi|126444048|ref|YP_001061161.1| OmpA family protein [Burkholderia pseudomallei 668]
gi|126223539|gb|ABN87044.1| OmpA family protein [Burkholderia pseudomallei 668]
Length = 558
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 439 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 498
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 499 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 545
>gi|172062069|ref|YP_001809721.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171994586|gb|ACB65505.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 555
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 79 HVSFVSEVFLEKKF-LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L + ++ + P + I+ H DS G+ NL +S+ RA I
Sbjct: 444 SLFASGKATFSPAHERRELAHVLRLIRENPDQRVLIEGHADSEGSADANLRLSEARARAI 503
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ +L+ G S +++G PI N ++ GR N+R+++ + P G
Sbjct: 504 RDWLVAEGGLSVARFAIQGMGDIRPIADNRSEAGRALNRRVDVSLIPDG 552
>gi|76819194|ref|YP_336761.1| OmpA family protein [Burkholderia pseudomallei 1710b]
gi|76583667|gb|ABA53141.1| OmpA family membrane protein [Burkholderia pseudomallei 1710b]
Length = 558
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 439 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 498
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 499 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 545
>gi|170727075|ref|YP_001761101.1| peptidoglycan-associated lipoprotein [Shewanella woodyi ATCC 51908]
gi|169812422|gb|ACA87006.1| peptidoglycan-associated lipoprotein [Shewanella woodyi ATCC 51908]
Length = 178
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 8/178 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L M IS C S + + ++ + G Q Q
Sbjct: 8 KAMLVAIPMMAISACSSTS-DSETDATSSNSSSGSELTTGGVETGGVAPVLTPQEQQRLK 66
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ I + +F +LQ L + P+ + I+ H D GT
Sbjct: 67 YQELRKEHII------YFDFDRSSVSAQFAEVLQAHGEYLIEHPNVRVMIEGHADERGTP 120
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA + +Q +S+ + + P+D + T G N+R +
Sbjct: 121 EYNIALGERRAKAVAK-YLQGMGVLPSQMSIVSYGEEKPLDMSRTDDGFAVNRRAVLV 177
>gi|90022860|ref|YP_528687.1| flagellar motor protein MotB [Saccharophagus degradans 2-40]
gi|89952460|gb|ABD82475.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 329
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 6/147 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLI 99
+ + Q+ + I + G MI I SF L + +L+ +
Sbjct: 139 EDTQDDAYELAAAMHEQITEGQIEIETRGRMIIIRIREKGSFVSGSADLSVELKDVLKEV 198
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVR 155
++L I +Q HTD++ +N +S R+ + L+ G + R V
Sbjct: 199 KSVLALRQG-KIEVQGHTDNVPIRSARFGSNWALSSARSVSVAHELMAGGDIAERRFEVA 257
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G+A PI ND+ R N+R+EI I
Sbjct: 258 GYADTMPIVPNDSAENRAINRRVEILI 284
>gi|56698451|ref|YP_168825.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56680188|gb|AAV96854.1| OmpA domain protein [Ruegeria pomeroyi DSS-3]
Length = 637
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 62/164 (37%), Gaps = 2/164 (1%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
S ++ D + + L+ A + + + + +
Sbjct: 438 TSHVEEASAEIARLLADKLGENQSFDLEIAYEAPPEPAETSLDADRCEALLAEVQANDKI 497
Query: 81 SF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+F + + IA +L + IQ HTDS G + N +SQ RA + +
Sbjct: 498 AFEPGSATIAASASGTMDRIADLLQSCGPIRLEIQGHTDSQGREEMNQQLSQARAQSVLN 557
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L R V + + + G+ PI N T+ GR+ N+RIE ++
Sbjct: 558 ELRARRVLTASY-AAVGYGESQPIADNGTEDGREANRRIEFRLI 600
>gi|226198818|ref|ZP_03794382.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|225929258|gb|EEH25281.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
Length = 558
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 439 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 498
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 499 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 545
>gi|53721134|ref|YP_110119.1| OmpA family protein [Burkholderia pseudomallei K96243]
gi|52211548|emb|CAH37542.1| OmpA family membrane protein [Burkholderia pseudomallei K96243]
Length = 558
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 439 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 498
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 499 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 545
>gi|89100104|ref|ZP_01172973.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
gi|89085194|gb|EAR64326.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
Length = 229
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 7/166 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S K V + +R + L + E + + IV +R + + V
Sbjct: 55 SENDKNVVNQGPDSDRQEEERLENLLQEVEGYLEKNGLEDVIVANRTERGVVLVLQEQVL 114
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADV 136
F E + + L + ++L P+ + ++ HTD+ N +S RA
Sbjct: 115 FESGEAEIIDRNSGFLDKVGSLLVGMPNL-VKVEGHTDNRPIATYRYPSNWELSAARASS 173
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL GV S RFI+V G+ P+ ND+ + N+R+E+ I
Sbjct: 174 VIRYLAGTGVDSKRFIAV-GYGDTRPLVPNDSAENLEKNRRVEVII 218
>gi|254299760|ref|ZP_04967209.1| OmpA family protein [Burkholderia pseudomallei 406e]
gi|157809397|gb|EDO86567.1| OmpA family protein [Burkholderia pseudomallei 406e]
Length = 558
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 439 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 498
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 499 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 545
>gi|229135343|ref|ZP_04264134.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196]
gi|228648118|gb|EEL04162.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196]
Length = 234
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L + + KK ++ + + K + + + +
Sbjct: 55 LSASSLEAEQAKKQAEDRAKE-KKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLML 113
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++ +L I + HTD++ +N +
Sbjct: 114 TILENVLFDSGKADVKLESLGIAKEMSNLLVSASPREITVSGHTDTVPIANAQFASNWEL 173
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT G+ N+R+E+ I P
Sbjct: 174 STQRAVNFMQVLLQNKDLQPEKFSAIGYGEYRSIAPNDTPEGKAKNRRVEVFILP 228
>gi|170681549|ref|YP_001744788.1| putative outer membrane lipoprotein [Escherichia coli SMS-3-5]
gi|218701117|ref|YP_002408746.1| putative outer membrane lipoprotein [Escherichia coli IAI39]
gi|170519267|gb|ACB17445.1| OmpA family protein [Escherichia coli SMS-3-5]
gi|218371103|emb|CAR18931.1| putative outer membrane lipoprotein [Escherichia coli IAI39]
Length = 160
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 64/183 (34%), Gaps = 27/183 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N ++S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEVLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQI 182
+ I
Sbjct: 155 VVI 157
>gi|114763629|ref|ZP_01443023.1| hypothetical protein 1100011001335_R2601_16020 [Pelagibaca
bermudensis HTCC2601]
gi|114543630|gb|EAU46643.1| hypothetical protein R2601_16020 [Roseovarius sp. HTCC2601]
Length = 465
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATIL 103
+ + Q ++ + + V G+ +T I ++ + LE +F ++ +A L
Sbjct: 321 ETAESVTAFLQPEIDEGLVTVESSGNTLTVQISGANMFAPASDTLEPRFAEVVDRVAGAL 380
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAY 159
N+ I + H+D+I S RA + I + + + IS G A
Sbjct: 381 NE-EGGQIIVAGHSDNIPINTARFPSNLALSLARAKFVME-RISQTLVDSSRISAEGRAD 438
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ PI +NDT GR N+RIE+ + G
Sbjct: 439 REPIASNDTPEGRAKNRRIEVILVKAG 465
>gi|172062063|ref|YP_001809715.1| hypothetical protein BamMC406_3023 [Burkholderia ambifaria MC40-6]
gi|171994580|gb|ACB65499.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria MC40-6]
Length = 434
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 55/140 (39%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V + + + + P+L +A+ + +
Sbjct: 296 RLSQLLRNEIARGLVTVDEDDRRSVVVFRGDSMFASGKRVVLPEIEPILNKVASEVARVG 355
Query: 108 STVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + HTD+ +N ++S++RA+ + L + G + R I G P+
Sbjct: 356 G-NVLVSGHTDNQPIRSAAFADNQVLSEKRAEFVAQILQRDGTPAER-IRAVGKGDTQPV 413
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
N T GR N+R+EI +
Sbjct: 414 GDNATAAGRALNRRVEIMVT 433
>gi|255036139|ref|YP_003086760.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254948895|gb|ACT93595.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 295
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 5/135 (3%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ D + + ++ + + F + +L +A ILN + I I+
Sbjct: 147 ADVSDEDVQIEVKKGVVYVSLSDKMLFRSGSSVINSAADNVLSKVAKILNDYKEIEILIE 206
Query: 115 SHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
HTD++ +N +S RA + L ++ + G P ND+
Sbjct: 207 GHTDNVPIATDKVADNWDLSVLRATAVARTLQKKYGVEPVRMIAGGRGEYLPKVANDSAP 266
Query: 171 GRQNNQRIEIQIFPR 185
R N+R EI I P+
Sbjct: 267 NRSLNRRTEIIITPK 281
>gi|170691850|ref|ZP_02883014.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170143134|gb|EDT11298.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 168
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 33/185 (17%)
Query: 2 IKELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L + ++GC + L+++
Sbjct: 1 MKKLLAASACAMSVLLMAGCSAPLNRDTETSLNRAA------------------------ 36
Query: 59 QDTGIVVSRIGDMITCYIPVH-VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
GI V+ + D + +P + + + ++ A +L + I ++ +T
Sbjct: 37 ---GIEVAPVADGVAVKLPEKALFDFDKSAVRADASAVVDRSAVLLKRSKK-PIIVEGYT 92
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D++GTL+ N +S+ RA + L+ RGV R + +G AY PI +NDT GR N+R
Sbjct: 93 DNVGTLEYNQQLSEARAVAVGYALVGRGVPMER-VRTKGNAYNNPIASNDTPEGRALNRR 151
Query: 178 IEIQI 182
EI +
Sbjct: 152 TEIVV 156
>gi|254189637|ref|ZP_04896147.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|157937315|gb|EDO92985.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237]
Length = 558
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 439 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 498
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 499 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 545
>gi|330448107|ref|ZP_08311755.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492298|dbj|GAA06252.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 348
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L + LQ + L ++PS + + +T + G+ N +S++RA + ++L+ + V+
Sbjct: 232 LTAEDQQKLQPMMQRLTRYPSATVEVTGYTSNTGSAAYNQKLSEKRAKNV-AHLLSQYVA 290
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ I+ +G P+ +NDT GR N+R+E+
Sbjct: 291 NPNQITAKGMGEATPVASNDTAEGRAANRRVEVY 324
>gi|315605260|ref|ZP_07880306.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp.
oral taxon 180 str. F0310]
gi|315313077|gb|EFU61148.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp.
oral taxon 180 str. F0310]
Length = 401
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 9/129 (6%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
++ V G +IT + + + L +AT+LN I HTDS
Sbjct: 273 ESLKPVESCGTVITLE-DSILFDFGKSDIRPDAAQTLSTLATVLNNAKVPAAHIYGHTDS 331
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQ 173
+ N +S++RA+ + + L + GV++ + G+ P+ N D GR
Sbjct: 332 VSDEAFNQKLSEDRANAVMNDLSKNGVTAT--LDATGYGETKPVAPNENPDGSDNPAGRA 389
Query: 174 NNQRIEIQI 182
N+R+EI I
Sbjct: 390 LNRRVEIYI 398
>gi|188577427|ref|YP_001914356.1| outer membrane protein P6 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188521879|gb|ACD59824.1| outer membrane protein P6 [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 148
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
V + + L+ +F ++ A L PS+ I +Q + D G+ + N+ + + R
Sbjct: 38 LRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADERGSREYNMGLGERR 97
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + S L G S+++ ++V + + P+ T + N+R+EI +
Sbjct: 98 GNAVSSSLQAAGGSASQ-LTVVSYGEERPVCTESNESCWSQNRRVEIVYTAQ 148
>gi|329888176|ref|ZP_08266774.1| ompA family protein [Brevundimonas diminuta ATCC 11568]
gi|328846732|gb|EGF96294.1| ompA family protein [Brevundimonas diminuta ATCC 11568]
Length = 330
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + + P + +A +L ++++ HTD+ G N +S+ERA + +
Sbjct: 228 FALDKADILDASRPQIDAMAQMLKDEAGLRLSVEGHTDNTGAPARNRPLSEERARAVVA- 286
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ + + + +GF P+ N + GR N+R+E+ P
Sbjct: 287 ALTQQGIDAKRLEAKGFGADKPVADNASDEGRARNRRVELVRLP 330
>gi|159042678|ref|YP_001531472.1| OmpA/MotB domain-containing protein [Dinoroseobacter shibae DFL 12]
gi|157910438|gb|ABV91871.1| OmpA/MotB domain protein [Dinoroseobacter shibae DFL 12]
Length = 310
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 6/154 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQ--MQLQDTGIVVSRIGDMIT----CYIPVHVSFVSEVFLE 89
T+I LD D L +G + + D++ + LE
Sbjct: 155 TEITPAEIALDLDTTPDAQVPGAALARSGDIARPLADLLLSQGRVVLEDLRFATGNATLE 214
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
P L +A L + P VIA+ HTD+ G++ NL +S RA+ ++ L+ ++
Sbjct: 215 NGQYPSLTALAGFLTENPDLVIALVGHTDAEGSIDANLALSMRRAEAVRDRLVADYGVAS 274
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ G Y P TN T+ GR+ N+R+E +
Sbjct: 275 ERLRAEGVGYLAPRATNRTEEGRRANRRVEAVLT 308
>gi|53720708|ref|YP_109694.1| putative outer membrane protein [Burkholderia pseudomallei K96243]
gi|52211122|emb|CAH37110.1| putative outer membrane protein [Burkholderia pseudomallei K96243]
Length = 310
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 150 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 209
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 210 TGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARADAVKGYLV 269
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI ND+ GR N+RIE +
Sbjct: 270 TK-GIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEFR 307
>gi|325335721|gb|ADZ11995.1| Flagellar motor protein [Riemerella anatipestifer RA-GD]
Length = 281
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 56/136 (41%), Gaps = 6/136 (4%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ D + V + ++ + + + + + +L +A ++N + + I+
Sbjct: 131 DNVADQDVQVKVLKGVVMISLSDKMLYRSGDYNILPAAQEVLGKVAKVINDYDKYSVLIE 190
Query: 115 SHTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+TD++ K+N +S RA + L + I+ G + P TN +
Sbjct: 191 GNTDNVPLNSASLPKDNWDLSALRATSVAKVLQNQFGVDPSRITAGGRSEYNPKATNMSV 250
Query: 170 VGRQNNQRIEIQIFPR 185
GR N+R EI I P+
Sbjct: 251 SGRAENRRTEIIIMPK 266
>gi|108763188|ref|YP_632960.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108467068|gb|ABF92253.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 615
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS-HTDSIGTL 123
V D + + ++ ++K+ +L +A ++ + P + + HTD G
Sbjct: 486 VEIRPDRLVV-MGKVFFEPTQARIQKRSYELLDWVARVIREHPEIPLVVVGAHTDDRGFP 544
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +SQ RA+ ++ YLI R ++ R + G+ + PID+N T GR+NN+R+E +
Sbjct: 545 DDNRRLSQGRAEAVRQYLIGRDIAPER-LKALGYGQERPIDSNATSNGRENNRRVEFLL 602
>gi|120599047|ref|YP_963621.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|146292882|ref|YP_001183306.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|120559140|gb|ABM25067.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
gi|145564572|gb|ABP75507.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
Length = 288
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 7/164 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A + + D A+ + + + +
Sbjct: 126 ARTTEANQAHQDARLARADAADARQESDDAQAQL------ALLNARESERGWVVTLGDVL 179
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ L +A L K+P I+ +TDS+GT + NL +S+ RAD + ++
Sbjct: 180 FDTGKANLKSSTSQHLTNLAAFLGKYPQRGAIIEGYTDSVGTEEYNLGLSERRADSVSNF 239
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
L + + +S +G +P+ N++ GRQ N+R+E+ I
Sbjct: 240 LQAQ-GVQSSRLSSQGKGESFPVANNESASGRQQNRRVEVIITN 282
>gi|162448691|ref|YP_001611058.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161159273|emb|CAN90578.1| Probable outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 351
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 56/177 (31%), Gaps = 6/177 (3%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G A + + L + + + A D + + V + +
Sbjct: 157 GSLSAELAETRAKLDDLRRKQAAAEARAAGIRDAVDRLKGAAFAGKVRVGLRAGQLVIEV 216
Query: 77 PVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
P F L + L IA +L P+ + +HTD+ + S
Sbjct: 217 PSDALFNGARAELTPEGRAALDDIAGVLRTMPAFRFQVAAHTDNDRKAMKSARFSSSWDL 276
Query: 136 VIKS-----YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ S R +S G+ P+ NDT+ GR N+R+EI +
Sbjct: 277 SAARATAVVKRLVERGMSPRGLSTVGYGEFSPVGPNDTEAGRARNRRVEILVVAEQE 333
>gi|317177876|dbj|BAJ55665.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
F16]
Length = 179
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 63/184 (34%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + I+GC ++ + ++ +K E + +
Sbjct: 1 MKRSSVFSFLVAFLFIAGCKHNMDKETVAGDVSAKTVQSAPVSTETAQEKQEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCTQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|302035652|ref|YP_003795974.1| putative OmpA/MotB family outer membrane protein [Candidatus
Nitrospira defluvii]
gi|300603716|emb|CBK40047.1| putative Outer membrane protein, OmpA/MotB family [Candidatus
Nitrospira defluvii]
Length = 400
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 9/154 (5%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPM 95
D + D Q ++ + + ++GD +T + + E L+ +
Sbjct: 246 DQQKTSLAEAKDDLSKLLQAEVAKGNVTMKQLGDQLTLGLATTLLFDSGEATLKPGGADV 305
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGT-------LKNNLLISQERADVIKSYLIQRGVSS 148
L I +L ++P I + HTD++ N+ +SQ RA+ + G +
Sbjct: 306 LHRIGGVLKQYPDRSIHVAGHTDNVPIKGRLAKTYPTNVELSQARAESA-RQALTEGGMA 364
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I +G A P+ +N T GRQ N+R+EI +
Sbjct: 365 PDKIEAKGHADSRPMASNSTAEGRQKNRRVEIVV 398
>gi|332881152|ref|ZP_08448812.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332680901|gb|EGJ53838.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 920
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E L+D + S + L + L+ I IL +P
Sbjct: 786 EARLVKLLEDKNLTTSEQFKDNWITLDRTYFKTGNDELTEGSEQQLKNIVAILKAYPKAA 845
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTK 169
I + +TD+ G+ + NL +S+ RA+ + + L+ ++ +S +G+ ++PI NDT
Sbjct: 846 IRLGGYTDNTGSAEGNLKLSERRANSVLNKLVAL-GANKAQLSAQGYGAEHPICPANDTD 904
Query: 170 VGRQNNQRIEIQIFPR 185
+ N+RI++++ +
Sbjct: 905 ECKAKNRRIDVRLTAK 920
>gi|330946399|gb|EGH47480.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 213
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + + + L+ + + L P V+ I+ +TDS G ++
Sbjct: 87 TETDRGLVMTLGDVLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDSTGDRQD 146
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL +S++RA + L+ GV R I V G+ ++P++ N ++ GR N+R+EI
Sbjct: 147 NLKLSKDRAQAVADVLMDLGVDEKR-IHVEGYGQEFPVNANTSERGRAQNRRVEIV 201
>gi|329295949|ref|ZP_08253285.1| peptidoglycan-associated outer membrane lipoprotein [Plautia stali
symbiont]
Length = 172
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 60/181 (33%), Gaps = 15/181 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ + ++ C ++ ++ E Q
Sbjct: 6 VLKGLMLALPV-IAVAACSSHKNNNNDQTGMGADGAYGAGAGQNGNMSSDEQARLQMQQL 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + ++ ++ ML A L PS + I+ H D
Sbjct: 65 QQNNI-------------VYFGLDKYDVQSEYAQMLDQHAAFLRSNPSYKVTIEGHADER 111
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S +S+ + + P + N+R +
Sbjct: 112 GTPEYNIALGERRANAV-KMYLQGKGVSAHQMSIVSYGKEKPAVLGHDEAAYAKNRRAVL 170
Query: 181 Q 181
Sbjct: 171 V 171
>gi|308063911|gb|ADO05798.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
Sat464]
Length = 179
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 61/184 (33%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + I+GC ++ + + +K E + +
Sbjct: 1 MKRSSVFSFLVAFLFIAGCKHNMNKETVAGDVSAKAVQSAPVSTETVQEKQEPKQEPAPV 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G +I + +++ L I + + ++ +TD
Sbjct: 61 VEKKPAIESGTIIA----SIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ LI + I F P T TK + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALIIK-GVEKDMIKTISFGETKPKCTQKTKECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|300697371|ref|YP_003748032.1| outer membrane protein; OmpA/MotB domain [Ralstonia solanacearum
CFBP2957]
gi|299074095|emb|CBJ53637.1| putative outer membrane protein; OmpA/MotB domain [Ralstonia
solanacearum CFBP2957]
Length = 279
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 3/160 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--S 81
+ +V +H + ++ S + + ++ + +
Sbjct: 118 DGTQVAVHGDVQNEAQRQQLASDMATTLGASYTIKNGLRVAAVSEQSLLDQTLANRIIEF 177
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L K +L +A +L + I I HTD+ G+ NL +SQ RA+ +KSYL
Sbjct: 178 ETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHTDNSGSRAMNLNLSQARAETVKSYL 237
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I + + ++ G P+ N T GR N+RIE +
Sbjct: 238 INK-GAEPGTLTAIGVGPDQPVAANTTDEGRSRNRRIEFR 276
>gi|239628950|ref|ZP_04671981.1| chemotaxis motB protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519096|gb|EEQ58962.1| chemotaxis motB protein [Clostridiales bacterium 1_7_47FAA]
Length = 277
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 63/172 (36%), Gaps = 13/172 (7%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + + ++ + + D ++ +VS + +
Sbjct: 80 STQVPTGSQNTQASAREMALMARDIQTYFDS---------ENLDAIVSNSENAVFIRFKN 130
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI---SQERA 134
+ F L ML + +L + ++A+ + + + + S ERA
Sbjct: 131 DLLFDPDSASLRADSKSMLDAVGIMLKEKQDNILAVYINGHTAQAANSLINDRLLSSERA 190
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
D + YL + + + RG+ YPI N T+ GR+ N+R+++ I G
Sbjct: 191 DNVAIYLEDQVGFDPKKLICRGYGKYYPIADNATREGREQNRRVDMIILGNG 242
>gi|220918872|ref|YP_002494176.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956726|gb|ACL67110.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 386
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 57/151 (37%), Gaps = 2/151 (1%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVSEVFLEKKFLPM 95
D D+ ++ + + + V F + L +
Sbjct: 237 DADGDGVADPDDRCPEQAGVAADGCPRAYRLLEVGRDRIALREPVRFGARDDLLPSSAVL 296
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +A L P +A++ HTD G + +SQ RA+ + + + +
Sbjct: 297 LDELAQALRDRPRLRVAVEVHTDGAGEAAASKRLSQARAEAV-RAALAGRGIEAERVEAK 355
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
GF ++PI +N T GR N+R EI+I P G
Sbjct: 356 GFGAEHPIASNKTARGRAQNRRTEIRILPGG 386
>gi|304312291|ref|YP_003811889.1| hypothetical protein HDN1F_26630 [gamma proteobacterium HdN1]
gi|301798024|emb|CBL46246.1| Hypothetical protein HDN1F_26630 [gamma proteobacterium HdN1]
Length = 224
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+T + S+ + +K +P ++ +A +LN +P + I+I+ HTD++G N +S+
Sbjct: 98 VTITGDSILFESSQSNVSRKGMPFIRKVADVLNAYPRSSISIEGHTDNMGEANYNQKLSE 157
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ + + + + + +S GF P+ N + R+ N+R+EI +
Sbjct: 158 ARANSVMN-ALNKAGVESSRMSATGFGMSKPLVENTSSSNRRTNRRVEIVVT 208
>gi|51473939|ref|YP_067696.1| peptidoglycan-associated lipoprotein precursor [Rickettsia typhi
str. Wilmington]
gi|51460251|gb|AAU04214.1| peptidoglycan-associated lipoprotein precursor [Rickettsia typhi
str. Wilmington]
Length = 155
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 60/182 (32%), Gaps = 30/182 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ L+ + + GC + + + + + K F
Sbjct: 1 MKTKITLAFLALFMLVGCNTTKKTTQMAGMVNQCEETSLMKDFEKY------------AG 48
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ L K L+ A L+K P + ++ H D
Sbjct: 49 NAVW----------------FAFDSASLSPKAKEDLERQACWLSKHPEVKVTVEGHCDER 92
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IE 179
GT N+ + + RA K +L +G++ NR ++ + P +T+ N+R +
Sbjct: 93 GTRDYNIALGERRAAAAKQFLANKGIAHNRLNTIS-YGKDKPAMMGNTEEAFSYNRRAVT 151
Query: 180 IQ 181
+
Sbjct: 152 VV 153
>gi|167896642|ref|ZP_02484044.1| OmpA family membrane protein [Burkholderia pseudomallei 7894]
Length = 541
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 422 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 481
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 482 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 528
>gi|296390513|ref|ZP_06879988.1| hypothetical protein PaerPAb_20266 [Pseudomonas aeruginosa PAb1]
Length = 158
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 62/180 (34%), Gaps = 28/180 (15%)
Query: 5 LGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L L++F + ++GC + E LQ+ G
Sbjct: 2 LALALFSLVLGLAGCQTKPPQTG-----------------------LSAEQIAVLQEQGF 38
Query: 64 VVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ G + V F + L L IA L + ++ HTD+ G
Sbjct: 39 ELRDEGWE--FGMSSKVLFGNNLDRLNPDSRNTLTKIAHALLAVDIDKVRLEGHTDNYGD 96
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA+ + + + I VRG P+ N T+ GR N+R+ I +
Sbjct: 97 EGYNQKLSERRAESVAAVFREA-GMPAANIEVRGLGMSKPVADNKTRAGRSENRRVAIIV 155
>gi|167035188|ref|YP_001670419.1| peptidoglycan-associated lipoprotein [Pseudomonas putida GB-1]
gi|166861676|gb|ABZ00084.1| peptidoglycan-associated lipoprotein [Pseudomonas putida GB-1]
Length = 166
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 22/166 (13%)
Query: 17 GCGLASREKK-KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
GC + + N N E +
Sbjct: 21 GCSSKGGDNAGEGAAVDPNAGYGANTGAVDGSLSEEAALRA------------------- 61
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I L+ + + L + A L + + ++ +TD GT + N+ + + RA
Sbjct: 62 ITTFYFEYDSSDLKPEAMRALDVHAKDLKSNGN-RVVLEGNTDERGTREYNMALGERRAK 120
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+ + S + + + + P+ T + + N+R+E++
Sbjct: 121 AVQRYLVLQ-GVSPAQLELVSYGEERPVATGNDEQSWAQNRRVELR 165
>gi|330808241|ref|YP_004352703.1| flagellar motor protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376349|gb|AEA67699.1| flagellar motor protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 294
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 58/169 (34%), Gaps = 7/169 (4%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
K + S D F + + V + + + F S
Sbjct: 84 KDSEQVDAGIAGGSDPLKSIADDISAAFGDLISSNQMTVRGNELWVEIELNSSLLFGSGD 143
Query: 87 FLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYL 141
+ ++ +A IL F I ++ TD N +S R+ I L
Sbjct: 144 AMPSDMAFNIIDKVAAILKPF-DNPIHVEGFTDDQPIRTAQYPTNWELSSARSASIVRML 202
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+GV+ R SV G+ P+ N T GR N+R+ + + ++++
Sbjct: 203 AMQGVNPGRLASV-GYGEFQPVANNATAEGRARNRRVVLVVSRNLDVRR 250
>gi|229526017|ref|ZP_04415421.1| protein F-related protein [Vibrio cholerae bv. albensis VL426]
gi|229336175|gb|EEO01193.1| protein F-related protein [Vibrio cholerae bv. albensis VL426]
Length = 204
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 72/203 (35%), Gaps = 24/203 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREK-------------------KKVFLHKSNDTDIVNKR 42
+K + + ++GCG ++ + +T ++
Sbjct: 1 MK--FWVLCVAFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWGYAPQKNTSVMPNA 58
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIA 100
+ ++ + L GI + GD + V + L +A
Sbjct: 59 MTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVA 118
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L I ++ HTD+ G+ K N +++ RA+ + + + + I RGF
Sbjct: 119 RFLATESGIDIVLEGHTDNTGSEKLNDKLAERRANAV-KAALVQSRVAQNAIYTRGFGEN 177
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P TN TK GR N+R+EI+
Sbjct: 178 VPACTNSTKNGRACNRRVEIRFI 200
>gi|319426588|gb|ADV54662.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 288
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 7/164 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A + + D A+ + + + +
Sbjct: 126 ARTTEANQAHQDARLARADAADARQESDDAQAQL------ALLNARESERGWVVTLGDVL 179
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ L +AT L K+P I+ +TDS+GT + NL +S+ RAD + ++
Sbjct: 180 FDTGKANLKSSTSQHLTNLATFLGKYPQRGAIIEGYTDSVGTEEYNLGLSERRADSVSNF 239
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
L + + +S +G +P+ N++ GRQ N+R+E+ I
Sbjct: 240 LQAQ-GVQSSRLSSQGKGESFPVANNESASGRQQNRRVEVIITN 282
>gi|298530630|ref|ZP_07018032.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298510004|gb|EFI33908.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 241
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 54/136 (39%), Gaps = 2/136 (1%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKF 106
++ E + + + + I + + F E L+ + +L + ++ +
Sbjct: 99 EELPPEISKSTLEENLEILMRPEGIALMMTGELLFPFAETRLQPQARQILDQVIPLVKAW 158
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
P + + +TD+I + + + + + +SV + +P+ N
Sbjct: 159 P-APVNVAGYTDNIPGIHMDNYEFAAERAMAVMEYLLINDVKQQRLSVSAYGEHFPVGDN 217
Query: 167 DTKVGRQNNQRIEIQI 182
+T+ GR N+R+EI +
Sbjct: 218 ETEEGRARNRRVEILL 233
>gi|127512457|ref|YP_001093654.1| OmpA domain-containing protein [Shewanella loihica PV-4]
gi|126637752|gb|ABO23395.1| OmpA domain protein [Shewanella loihica PV-4]
Length = 180
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 55/178 (30%), Gaps = 6/178 (3%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + IS C S + S G + I
Sbjct: 8 KAMVVALPIMAISACSSTSESQTDATSSMSGSESSEMNAGGGVETGGVAPILTPEEQQRI 67
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + F +L L + P+ + I+ H D GT
Sbjct: 68 KYQELRKEHII-----YFDFDRSSVSSDFSEVLNAHGEYLLEHPNVRVMIEGHADERGTP 122
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA + YL GV ++ S+ + + P D + T G N+R +
Sbjct: 123 EYNIALGERRAKAVAKYLQSMGVLPSQM-SIVSYGEEKPQDFSRTDDGFAKNRRAVLV 179
>gi|146307724|ref|YP_001188189.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145575925|gb|ABP85457.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 270
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
S + + + L+ + + L P + I+ +TD+ G+ +
Sbjct: 144 SETERGLVMTLGDMLFDAGRADLQPAANRTVLKLVQFLQINPQRRVRIEGYTDNTGSAEE 203
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL +S+ RA + L+ + I V G+ +P+ N + GR N+R+EI
Sbjct: 204 NLELSRARAQAVADLLVDL-GIDAKRIQVVGYGVDFPVAENASARGRAQNRRVEIV 258
>gi|89069954|ref|ZP_01157287.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
gi|89044508|gb|EAR50636.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
Length = 298
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 13/174 (7%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
+ + SR + + + +L+ G VV
Sbjct: 136 LALLV---STTSRAGFVQLTRIAPEGAAAVSIDAAEAPAVTGGLGAELEARGHVV----- 187
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ L L +A L P+ + + HTDS G+L N+ +S
Sbjct: 188 -----LGDLDFETGSARLGPGSFASLDALARYLAAAPARRVVLVGHTDSQGSLAGNISLS 242
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ RAD +++ LI + ++ G Y P+ +N T GR+ N+R+E +
Sbjct: 243 RRRADQVRTRLIAEHGTDPAQLTADGVGYLAPVASNLTPEGREANRRVEAVLVS 296
>gi|260467067|ref|ZP_05813247.1| peptidoglycan-associated lipoprotein [Mesorhizobium opportunistum
WSM2075]
gi|259029176|gb|EEW30472.1| peptidoglycan-associated lipoprotein [Mesorhizobium opportunistum
WSM2075]
Length = 168
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 28/174 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++ M I+GC L +
Sbjct: 12 VMIALVAMLAIAGCASKKTPNSAADLGLNGAGAATPGSAQD------------------- 52
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
T I + F + L A LN++ I ++ H D GT
Sbjct: 53 -------FTVNIGDRIFFDTDSSSIRADAQTTLARQAQWLNQYKQYAIVVEGHADERGTR 105
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NL + RA + +L+ +GV+S+R ++ + + P+ D N+R
Sbjct: 106 EYNLALGARRAAAARDFLVSKGVASSRLKTIS-YGKERPVAVCDDISCWSQNRR 158
>gi|254523338|ref|ZP_05135393.1| MotB protein [Stenotrophomonas sp. SKA14]
gi|219720929|gb|EED39454.1| MotB protein [Stenotrophomonas sp. SKA14]
Length = 338
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+AS+ + V +H ++ S D+ + I V R I I
Sbjct: 106 SMASQMRMPVSVHNQEQIARAERQLNSIADRLTAALAPLIDRGMISVRRTELWIEVEINS 165
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L+ L +A +L P+ + ++ HTD++ +N +S R
Sbjct: 166 DILFPTGSAALDVHARQTLASLADVLRDVPN-SVRVEGHTDNVPIATATFPSNWELSAGR 224
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + +GV +R +++ G+ P + ND+ GR N+R+ + I
Sbjct: 225 AASVVHLFADQGVQPSR-LAMVGYGQFRPREENDSAQGRNRNRRVMVIIL 273
>gi|304408922|ref|ZP_07390543.1| type IV / VI secretion system protein, DotU family [Shewanella
baltica OS183]
gi|307302925|ref|ZP_07582680.1| type IV / VI secretion system protein, DotU family [Shewanella
baltica BA175]
gi|304352743|gb|EFM17140.1| type IV / VI secretion system protein, DotU family [Shewanella
baltica OS183]
gi|306913285|gb|EFN43707.1| type IV / VI secretion system protein, DotU family [Shewanella
baltica BA175]
Length = 436
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 57/159 (35%), Gaps = 7/159 (4%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFL 88
+ + V+ + + Q ++ + V + D + + +H F +
Sbjct: 279 VDNTPQALQVSASTVHEGARLQQLLQTEIGMQLLEVIELPDRVRIRVGLHHLFTTGGTDI 338
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQR 144
+ F P++ IA L I + +TD +N +S RA+ + L
Sbjct: 339 NEGFQPVIVKIARALEGTKG-RILVNGYTDDQPIFTSRYPSNWHLSLARANAMADSLAAG 397
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R + G P+ NDT R N+R+EI +
Sbjct: 398 ADLHGR-LQPEGRGEAEPVAPNDTPENRALNRRVEIDLL 435
>gi|126456220|ref|YP_001074174.1| OmpA family protein [Burkholderia pseudomallei 1106a]
gi|126229988|gb|ABN93401.1| OmpA family protein [Burkholderia pseudomallei 1106a]
Length = 542
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 423 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 482
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 483 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 529
>gi|167913324|ref|ZP_02500415.1| OmpA family membrane protein [Burkholderia pseudomallei 112]
Length = 542
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 423 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 482
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 483 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 529
>gi|157889001|dbj|BAF80950.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 2/148 (1%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
K+ + + G ++ IG T + H F ++ + +
Sbjct: 176 APKTPQTTTKQIEEKPQAKQIDKSCPEPRKGALLDHIGCEKTIALEGHFGF-DQISINPE 234
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F +Q + +L + P ++ HTDS G+ N +S ERA + +++ +
Sbjct: 235 FAQKIQEVGKVLEENPQYYTILEGHTDSTGSKVYNQKLSLERAKAVAKE-LEKSGVAKEK 293
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
I+ +G+ + P +NDTK GR N+R+E
Sbjct: 294 IATKGYGFDKPKASNDTKEGRAQNRRVE 321
>gi|56696346|ref|YP_166703.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
gi|56678083|gb|AAV94749.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
Length = 415
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + +L +A L + I I H+ S G + N +SQ RA
Sbjct: 309 LHGIGFNYDSAAIRPESAVLLNALADGLRGTDAARIEIVGHSSSEGAAEYNRALSQRRAA 368
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ + L+ + ++ G PI +N + GR N+R+E+
Sbjct: 369 SVVAALVD-MGLAADRLAALGKGEDEPIASNADEAGRSLNRRVEV 412
>gi|326568759|gb|EGE18829.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis BC8]
Length = 171
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 64/173 (36%), Gaps = 17/173 (9%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSND-TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ ++T ++GC S + V + T ++ +D E V
Sbjct: 13 LSVLTFMTGCANKSTSQVMVAPNAPTGYTGVIYTGVAPLVDNDE------------TVKA 60
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + + ++ + +L A L + + + HTD G+ + N+
Sbjct: 61 LASKLP---SLVYFDFDSDEIKPQAAAILDEQAQFLTTNQTARVLVAGHTDERGSREYNM 117
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ + RA +++YL+ + + + + F + PI + N+R E+
Sbjct: 118 SLGERRAVAVRNYLLGK-GINQASVEIISFGEERPIAFGTNEEAWSQNRRAEL 169
>gi|322420089|ref|YP_004199312.1| hypothetical protein GM18_2585 [Geobacter sp. M18]
gi|320126476|gb|ADW14036.1| conserved repeat domain protein [Geobacter sp. M18]
Length = 1890
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ + + + L + +L A +L + P + ++ HTD IGT++ N
Sbjct: 1606 NRREAVLLTLAGGAFIFDKSVLTTEAKRLLSGAARVLRERPRERVILEGHTDGIGTVEYN 1665
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ +S+ R D YLI+ + + R + P+ N T GR+ N+R+E+ +G
Sbjct: 1666 MALSKRRCDAAAEYLIRVEGVAPSRLLRRWYGKSRPVADNVTTSGRRLNRRVEL----KG 1721
Query: 187 NIKK 190
+ +K
Sbjct: 1722 DFQK 1725
>gi|331016979|gb|EGH97035.1| flagellar motor protein MotD [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 295
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVS 84
K + + + D F ++ + V I + + F
Sbjct: 84 KDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSLLFFSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K +++ ++ I+ +F I ++ TD N +S R+ I
Sbjct: 144 DAMPSDKAFTIIEKVSGIVKRF-DNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVRM 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L G++ R SV G+ PI N T GR N+R+ + I ++++
Sbjct: 203 LAMDGINPARLASV-GYGEFQPIAPNTTAAGRAKNRRVVLVISRNLDVRR 251
>gi|304397299|ref|ZP_07379178.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB]
gi|304355448|gb|EFM19816.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB]
Length = 412
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 56/135 (41%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V D + F S + +++ ++Q IA +N I
Sbjct: 263 LKPEIDAGLVAVRDEADRSVVTLKGDGLFASAATDVRGRYVDVIQRIAAAMNNVSG-QIQ 321
Query: 113 IQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ ++D++ +N +S RA ++S L Q+ +R + G P+ N++
Sbjct: 322 VIGYSDNVPIRSARFGSNFELSLARARSVQSLLQQQLADPSR-VKAEGRGESNPLVPNNS 380
Query: 169 KVGRQNNQRIEIQIF 183
R N+R+EI +
Sbjct: 381 AENRARNRRVEITLL 395
>gi|262369640|ref|ZP_06062968.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262315708|gb|EEY96747.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 485
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 57/149 (38%), Gaps = 4/149 (2%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
VN+ +S+ AE V + + + + + +L
Sbjct: 326 VNRAVDTSISDAERALAEI---NPEQVRALDVATALNLQIINFDTASSTIPDVNKSILDQ 382
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
A ++ K P + + HTD+ G N +SQ RA + YLI + + G+
Sbjct: 383 AAALMQKAPQVKLTVMGHTDATGDAAVNKTLSQNRAQAVVDYLIFK-GVDPAQLRAIGYG 441
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ PI N T G+ N+RIE ++ +
Sbjct: 442 QEKPIADNQTDEGKFKNRRIEFEVLNTDS 470
>gi|254262577|ref|ZP_04953442.1| OmpA family protein [Burkholderia pseudomallei 1710a]
gi|254213579|gb|EET02964.1| OmpA family protein [Burkholderia pseudomallei 1710a]
Length = 542
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 423 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 482
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 483 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 529
>gi|289207478|ref|YP_003459544.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288943109|gb|ADC70808.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 213
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 61/202 (30%), Gaps = 22/202 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS--------------- 45
++K + + I A ++ ++V R G
Sbjct: 5 LVKNILAASVATLLIGTASQAVAQEPPAANVTDRSGNVVMDRSGECVRTRSWAPENVRHS 64
Query: 46 ----SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+ + + + T + L + L+ +A
Sbjct: 65 ECAGYIQETAEAPEPDPAPEPEPEPEPEFETTTLSAQALFDFDSADLRPEGRDALRELAR 124
Query: 102 ILNKFPS--TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
L + + ++ HT +IG N +S+ RA + +L I G+
Sbjct: 125 SLTADDVEYSSVLVEGHTCTIGPADYNQGLSERRAQSVADFLASE-GVREDDIRTVGYGE 183
Query: 160 KYPIDTNDTKVGRQNNQRIEIQ 181
P N T+ GR+ N+R+E+
Sbjct: 184 DRPTADNSTREGREANRRVEVT 205
>gi|167818176|ref|ZP_02449856.1| OmpA family membrane protein [Burkholderia pseudomallei 91]
Length = 541
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 422 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 481
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 482 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 528
>gi|317180858|dbj|BAJ58644.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
F32]
Length = 179
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 60/184 (32%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + + +GC K + + +K E + +
Sbjct: 1 MKRSSAFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCIQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|221068229|ref|ZP_03544334.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
gi|220713252|gb|EED68620.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
Length = 215
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 65/210 (30%), Gaps = 28/210 (13%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-------- 50
M K ++ + ++ G + + + + ++
Sbjct: 1 MKKLNKVAMLFASAALVTAAGAQVKAADGGKTIDNWQNGTSELVWKNGTNELCWRDANWT 60
Query: 51 --------EDEFQMQLQDTGIVVSRIGDMITCYIP---------VHVSFVSEVFLEKKFL 93
+ + Q+ + + L+
Sbjct: 61 PATAAVDCDGALKAQVTAAPAPAVVPPAPVAPQPAVASKVTYSADAFFDFDKSVLKPAGK 120
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L + + VI HTDSIG+ N +S RA+ +K+YL+ + +
Sbjct: 121 AKLDDLTGKIKDINLEVIIAVGHTDSIGSDAYNQKLSVRRAEAVKAYLVSK-GIEKSRVY 179
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
G K P+ +N T GR N+R+EI++
Sbjct: 180 TEGKGKKQPVASNATAAGRAQNRRVEIEVV 209
>gi|167722027|ref|ZP_02405263.1| OmpA family membrane protein [Burkholderia pseudomallei DM98]
Length = 531
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 412 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 471
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 472 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 518
>gi|156934764|ref|YP_001438680.1| peptidoglycan-associated outer membrane lipoprotein [Cronobacter
sakazakii ATCC BAA-894]
gi|260597140|ref|YP_003209711.1| peptidoglycan-associated outer membrane lipoprotein [Cronobacter
turicensis z3032]
gi|156533018|gb|ABU77844.1| hypothetical protein ESA_02604 [Cronobacter sakazakii ATCC BAA-894]
gi|260216317|emb|CBA29304.1| Peptidoglycan-associated lipoprotein [Cronobacter turicensis z3032]
Length = 172
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 58/181 (32%), Gaps = 15/181 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C L
Sbjct: 6 VLKGLMIALPVM-AIAACSSNKNASNDQSGEG-------------MLGAGTGMNGNGGNM 51
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ +R+ + + + + F ML A L PS + ++ H D
Sbjct: 52 SSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 111
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S IS+ + + P + N+R +
Sbjct: 112 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 170
Query: 181 Q 181
Sbjct: 171 V 171
>gi|167848084|ref|ZP_02473592.1| OmpA family protein [Burkholderia pseudomallei B7210]
Length = 531
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 412 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 471
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 472 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 518
>gi|315223848|ref|ZP_07865696.1| inorganic diphosphatase [Capnocytophaga ochracea F0287]
gi|314946178|gb|EFS98179.1| inorganic diphosphatase [Capnocytophaga ochracea F0287]
Length = 919
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E ++D + + L + L+ I IL +P
Sbjct: 785 EAHLVKLIEDKNLTTPEQFKDNWITLDRTYFKTGSDELTEGSEQQLKNIVAILKAYPKAA 844
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTK 169
I + +TD+ G+++ N +S+ RA+ + + L+ ++ +S +G+ ++P+ NDT
Sbjct: 845 IRLGGYTDNTGSVEGNKKLSERRANSVLNKLVAL-GANKAQLSAQGYGAEHPLCPANDTP 903
Query: 170 VGRQNNQRIEIQIFPR 185
+ N+RI+I++ +
Sbjct: 904 ECKAKNRRIDIRLTAK 919
>gi|119899491|ref|YP_934704.1| lipoprotein attached to the membrane by a lipid anchor [Azoarcus
sp. BH72]
gi|119671904|emb|CAL95818.1| lipoprotein attached to the membrane by a lipid anchor [Azoarcus
sp. BH72]
Length = 193
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 61/172 (35%), Gaps = 11/172 (6%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV------SRIGDM 71
C + + KR S+ Q +L V D
Sbjct: 23 CATGDANRP---SEGGSTPPAAEKRAASTAKIDWAALQKELSGALRGVQDAEVGEATADG 79
Query: 72 ITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I IP + +L + L P I + HTD +G+ NL +S
Sbjct: 80 IHLRIPVSNGFASGGSEPRPALTKVLDSLVAPLAARPGVGIKVIGHTDGLGSEMYNLKLS 139
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+RA+ + YL RG++ +R +S G PI N + R N+R+EI +
Sbjct: 140 IQRAEAVMEYLRSRGIAFDR-LSADGKGETEPIADNAKEATRARNRRVEIVL 190
>gi|190574215|ref|YP_001972060.1| flagellar motor protein MotD [Stenotrophomonas maltophilia K279a]
gi|190012137|emb|CAQ45760.1| putative chemotaxis protein MotB [Stenotrophomonas maltophilia
K279a]
Length = 338
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+AS+ + V +H ++ S D+ + I V R I I
Sbjct: 106 SMASQMRMPVSVHNQEQIARAERQLNSIADRLTAALAPLIDRGMISVRRTELWIEVEINS 165
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L+ L +A +L P+ + ++ HTD++ +N +S R
Sbjct: 166 DILFPTGSAALDVHARQTLASLAEVLRDVPN-SVRVEGHTDNVPIATATFPSNWELSAGR 224
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + +GV +R +++ G+ P + ND+ GR N+R+ + I
Sbjct: 225 AASVVHLFADQGVQPSR-LAMVGYGQFRPREENDSAQGRNRNRRVMVIIL 273
>gi|167826566|ref|ZP_02458037.1| OmpA family membrane protein [Burkholderia pseudomallei 9]
Length = 531
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 412 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 471
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 472 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 518
>gi|15893597|ref|NP_346946.1| chemotaxis motility protein B, gene motB [Clostridium
acetobutylicum ATCC 824]
gi|15023148|gb|AAK78286.1|AE007545_3 Chemotaxis motility protein B, gene motB [Clostridium
acetobutylicum ATCC 824]
gi|325507717|gb|ADZ19353.1| Chemotaxis motility protein B, gene motB [Clostridium
acetobutylicum EA 2018]
Length = 256
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 58/171 (33%), Gaps = 6/171 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+S ++ ++ + K + + + + I
Sbjct: 74 STSSYVTQEASKQSASAEKAEENKLKDVKKKIDQYVNQNGMQGSVSTNLQEKGLVVSIVD 133
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQER 133
+ F ++ F L I IL + I I+ HTD+ +N+ + R
Sbjct: 134 TLMFDTGRAEVKPDFQKKLVEIGEILKTIDNY-IRIEGHTDNTPISNSQYASNIELGSAR 192
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++ ++ I + +A P+ N+++ G+ N+R++I I
Sbjct: 193 SNNVEHLFIDVSKIPVTQMYTVSYADTRPVADNNSEAGKARNRRVDIVILN 243
>gi|84515731|ref|ZP_01003092.1| OmpA/MotB family protein [Loktanella vestfoldensis SKA53]
gi|84510173|gb|EAQ06629.1| OmpA/MotB family protein [Loktanella vestfoldensis SKA53]
Length = 307
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 10/174 (5%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
+ IS AS + D + + + +A QL D G + R D
Sbjct: 142 LTLVISRMADASFVQITQITPTGLDMQPLATATAAPVGQANGSLAQQLDDLGHAILRDLD 201
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ L + L +A L +P +A+ HTDS G L N+ +S
Sbjct: 202 ----------FTIGSAQLSEAAFASLAELAAYLAAYPDRSVALVGHTDSAGALDINIALS 251
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
Q RA + L+ R + R ++ G Y PI +N T+ GR N+R+E+ +
Sbjct: 252 QRRARAVLDRLVTRHGVNRRQLAAEGMGYLAPIASNQTETGRDANRRVEVIVTS 305
>gi|255534563|ref|YP_003094934.1| putative flagellar motor protein MotB [Flavobacteriaceae bacterium
3519-10]
gi|255340759|gb|ACU06872.1| putative flagellar motor protein MotB [Flavobacteriaceae bacterium
3519-10]
Length = 300
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ D + V + ++ + + + + + +L +A ++N + + + I+
Sbjct: 150 DNIADDDVQVKVLKGVVMISLSDKMLYKTGDYNVMPAAQEVLGKVAQVINDYDTYSVLIE 209
Query: 115 SHTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+TD++ K+N +S RA + L + + I+ G + P TN +
Sbjct: 210 GNTDNVPLSSANLPKDNWDLSALRATSMAKILQTKFGVNPARITAGGRSEYNPKTTNASV 269
Query: 170 VGRQNNQRIEIQIFPR 185
GR N+R EI I P+
Sbjct: 270 SGRAENRRTEIIIMPK 285
>gi|149198155|ref|ZP_01875202.1| OmpA/MotB [Lentisphaera araneosa HTCC2155]
gi|149138757|gb|EDM27163.1| OmpA/MotB [Lentisphaera araneosa HTCC2155]
Length = 199
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 15/196 (7%)
Query: 2 IK----ELGLSMFIMTTISGCGLA--SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+K ++ + +++ ++ C + N + S + E
Sbjct: 1 MKFKTLQICTFLAVISLMTACQSTEDGTSGSGDLANSPNTQEADPSSKVFSPEDQSPELN 60
Query: 56 MQL--------QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ G+ I + ++K L L+++A +
Sbjct: 61 PSTSISDGLFSKGGKNPFDLDGEKIHHNFSPVYFGFNSASIDKSNLRPLKILAKYIADNK 120
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I HTD G+ + N ++S++RA ++ LI N+ ++ G + P D
Sbjct: 121 DFHLVISGHTDEKGSEQYNRILSEKRALAVREKLISFYDIKNKIHTI-GMGEEQPASLGD 179
Query: 168 TKVGRQNNQRIEIQIF 183
+ N+R + +I
Sbjct: 180 SIKDHAKNRRAQFEII 195
>gi|13473329|ref|NP_104896.1| peptidoglycan-associated lipoprotein precursor [Mesorhizobium loti
MAFF303099]
gi|22653894|sp|Q98F85|OMP16_RHILO RecName: Full=Outer membrane lipoprotein omp16 homolog; Flags:
Precursor
gi|14024078|dbj|BAB50682.1| mll3887 [Mesorhizobium loti MAFF303099]
Length = 168
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 28/174 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++ M I+GC L +
Sbjct: 12 VMIALVAMLAIAGCASKKTPNNAADLGLNGAGAATPGSAQD------------------- 52
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
T I + F + L A LN++ I ++ H D GT
Sbjct: 53 -------FTVNIGDRIFFDTDSSSIRADAQTTLARQAQWLNQYKQYAIVVEGHADERGTR 105
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NL + RA + +L+ +GV+S+R ++ + + P+ D N+R
Sbjct: 106 EYNLALGARRAAAARDFLVSKGVASSRLKTIS-YGKERPVAVCDDISCWSQNRR 158
>gi|83854840|ref|ZP_00948370.1| flagellar motor protein [Sulfitobacter sp. NAS-14.1]
gi|83842683|gb|EAP81850.1| flagellar motor protein [Sulfitobacter sp. NAS-14.1]
Length = 582
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 63/185 (34%), Gaps = 14/185 (7%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
T ++ R + ++ + + K + + L V GD
Sbjct: 400 TALARVAAEERRRAELEAAERARLEAETKNLEQYRSEFFGRLR-ALLGNQEGVRIEGDRF 458
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDSI----- 120
+ L + +A IL VI + HTD+
Sbjct: 459 VFS-SEVLFPPGAATLSADGRGEIAKVAGILRNIAADIPPEIDWVIRVDGHTDNQPLSGL 517
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G +N +SQ RA + Y+I + ++ GF P+ + +T+ R N+RIE+
Sbjct: 518 GEFADNWELSQARALSVVKYMINFLGIAPERLAANGFGQYQPVASGNTEAARAQNRRIEL 577
Query: 181 QIFPR 185
++ R
Sbjct: 578 KLTER 582
>gi|264677568|ref|YP_003277474.1| OmpA/MotB [Comamonas testosteroni CNB-2]
gi|262208080|gb|ACY32178.1| OmpA/MotB [Comamonas testosteroni CNB-2]
Length = 214
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 61/209 (29%), Gaps = 27/209 (12%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKS------------------------N 34
M K ++ + ++ G + +
Sbjct: 1 MKKLNKVAMLFASAALVTAAGAQVKAADGGKTIDNWQNGTSELVWKNGTNELCWRDANWT 60
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
G+ + + + Y + L+
Sbjct: 61 PATAAVDCDGALKAQVAAPAPAVVPPAPVAPQPAVASKVTYSADAFFDFDKSVLKPAGKA 120
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L + + VI HTDSIG+ N +S RA+ +K+YL+ + +
Sbjct: 121 KLDDLTGKIKDINLEVIIAVGHTDSIGSDAYNQKLSVRRAEAVKAYLVSK-GIEKSRVYT 179
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
G K P+ N T GR N+R+EI++
Sbjct: 180 EGKGKKQPVADNKTAAGRAQNRRVEIEVV 208
>gi|149198154|ref|ZP_01875201.1| peptidoglycan-associated lipoprotein [Lentisphaera araneosa
HTCC2155]
gi|149138756|gb|EDM27162.1| peptidoglycan-associated lipoprotein [Lentisphaera araneosa
HTCC2155]
Length = 197
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 61/192 (31%), Gaps = 11/192 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLA--------SREKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
+ K L S + ++ C SRE S + L ED
Sbjct: 3 LFKYLTYSSLLAL-LASCASDDNTYTRSESREPNMNIPGGSGPLYGDGDTIDNGLPPIED 61
Query: 53 EFQMQLQDTGIVVSRI--GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ D G V++ G + I + +Q IA L PS
Sbjct: 62 GTFVNDSDIGAVLNNSEHGTPVAHDIEPVYFAFDSAAVRSAEDAKIQAIAEFLTSNPSFT 121
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ I H D G+ + N +S++RA +K L+ I + + P
Sbjct: 122 LVIGGHCDERGSDEYNRTLSEKRALSVKESLLSASPDLEMRIETVAYGEEKPAVVGADSQ 181
Query: 171 GRQNNQRIEIQI 182
N+R E ++
Sbjct: 182 SYAKNRRAEFEV 193
>gi|260494689|ref|ZP_05814819.1| peptidoglycan-associated lipoprotein [Fusobacterium sp. 3_1_33]
gi|260197851|gb|EEW95368.1| peptidoglycan-associated lipoprotein [Fusobacterium sp. 3_1_33]
Length = 166
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ ++ + I + ++ ++ ML + + K +
Sbjct: 9 NALEINKMEALKEEPPEEMTIVLDDRALNFDFDKSVVKPQYNEMLTNLKDFIEKN-DYEV 67
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I HTD I + N+ +S+ RA+ +K+ LI+ G+ +R + + + PI N T G
Sbjct: 68 TIVGHTDYIASNAYNMGLSKRRAEAVKTKLIELGLDPSRIVGIVPRGEEEPIADNATTEG 127
Query: 172 RQNNQRIEIQIFPRGN 187
R N+R+E ++ RG+
Sbjct: 128 RAKNRRVEFKLVKRGS 143
>gi|332970903|gb|EGK09879.1| outer membrane protein OprF [Psychrobacter sp. 1501(2011)]
Length = 315
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +++ +V IG I + + ++ +A +NK+P+T I
Sbjct: 186 LEPEIEPEPVVKVEIGKPINL---EVLFEFDKAVVQPVLNQRSMAVANFMNKYPNTSTII 242
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ HTDSIG N+ +SQ+RA+ +K LI + + + +GF P+DTN T+ GR
Sbjct: 243 EGHTDSIGAANYNMKLSQQRAEAVKQELISKYGVNPNRLITQGFGETRPVDTNTTEKGRY 302
Query: 174 NNQRIEIQI 182
NN+R+ I
Sbjct: 303 NNRRVVATI 311
>gi|126730858|ref|ZP_01746667.1| OmpA domain protein [Sagittula stellata E-37]
gi|126708574|gb|EBA07631.1| OmpA domain protein [Sagittula stellata E-37]
Length = 318
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 56/164 (34%), Gaps = 1/164 (0%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
SR ++ V + I + D + V
Sbjct: 154 TSRGPSDGYVQVIRAGQDVQAEITRDAPALARTSGAAIDPGDIPAALERDG-HVTLSDLV 212
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L + L +A L+ P+ I HTD+ G+L+ N +S RA +Y
Sbjct: 213 FRSGSTDLGGDDIASLDALAQYLSDNPTRRILFVGHTDATGSLEANRGVSLRRAQAAVAY 272
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
L R + I G Y P+ +N T GR+ N+R+E +
Sbjct: 273 LRSRHDTDAGRIGAEGAGYLAPVASNLTAEGREANRRVEAVLIS 316
>gi|282877998|ref|ZP_06286806.1| OmpA family protein [Prevotella buccalis ATCC 35310]
gi|281299833|gb|EFA92194.1| OmpA family protein [Prevotella buccalis ATCC 35310]
Length = 288
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 63/141 (44%), Gaps = 12/141 (8%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +L++ + V + ++ + ++ + + + L IA I+ + + +
Sbjct: 131 REELKE--VDVQVLKGVVYISLADNMLYKSGSYEINDRAAETLSKIAKIIMDYKDYDVLV 188
Query: 114 QSHTDSIGTLKN---------NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ +TD++ +N N +S RA + +L + ++ G P+
Sbjct: 189 EGNTDNVPVNQNSPLMKNIRNNWDLSTLRASSVVQFLQSHYGVDPKRMTAGGRGEYNPLT 248
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
+N+T++G+Q N+R +I I P+
Sbjct: 249 SNNTELGKQRNRRTQIIITPK 269
>gi|237809441|ref|YP_002893881.1| peptidoglycan-associated lipoprotein [Tolumonas auensis DSM 9187]
gi|237501702|gb|ACQ94295.1| peptidoglycan-associated lipoprotein [Tolumonas auensis DSM 9187]
Length = 171
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 68/182 (37%), Gaps = 18/182 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDT-DIVNKRFGSSLDKAEDEFQMQLQ 59
++K L +++ ++T ++ C + + G S D+ + L+
Sbjct: 6 LLKTLLIAIPLVT-LAACSSKKGSTSADTDGMAGQGVETSGLDSGLSADEQARQQFESLK 64
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ +E ++ +LQ A L S + I+ HTD
Sbjct: 65 QDNV---------------IYFNYDSDAIEGQYAQLLQTHADFLRGHNSVKVLIEGHTDE 109
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N+ + + RA + Y+ GV ++ +SV + + P D + +N+R
Sbjct: 110 RGTPEYNIALGERRAKAVAKYMQNLGVDVSQ-LSVVSYGEEKPADPGHAEDAFGHNRRAV 168
Query: 180 IQ 181
+
Sbjct: 169 LV 170
>gi|254487047|ref|ZP_05100252.1| OmpA family protein [Roseobacter sp. GAI101]
gi|214043916|gb|EEB84554.1| OmpA family protein [Roseobacter sp. GAI101]
Length = 191
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 67/194 (34%), Gaps = 19/194 (9%)
Query: 1 MIKEL--GLSMFIMTTISGC---GLASREKKKVFLHKSNDTDIVNKRFGSSL-------- 47
M+ + GL +F T I+ ++ + + + + +
Sbjct: 1 MLNTISKGLRLFAGTLIAATFVFQTSAADAQTRSQGGRDKGQYIPTIWVDPDGCEHWVMD 60
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D AE + GI V R G++ + + +A
Sbjct: 61 DGAEGYMTPHVSRQGIPVCRRGNVCGVMETDQFFKTDSYRIHPQGKA---RLAEFFKSTG 117
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I HTDS + N+ +S RA+ + + Q S R VRG+ + P +N
Sbjct: 118 AVSYIISGHTDSRASDAYNMKLSLNRANSVAAIAQQ---SGARIADVRGYGERIPAASNS 174
Query: 168 TKVGRQNNQRIEIQ 181
T G N+R+EI
Sbjct: 175 TAAGMAKNRRVEII 188
>gi|127511566|ref|YP_001092763.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
gi|126636861|gb|ABO22504.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 481
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+I + + + + ++ +AT L P + HTD G
Sbjct: 360 DKIAQQGHVALDGLLFKFDSDQMLPEADEVITTLATYLKSHPKQHFYVVGHTDDQGKQGY 419
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S++RA + + L Q + +S G P+ N + GRQ N+R+E+ + R
Sbjct: 420 NKGLSEQRAKAVVATLTQSHGINKAQLSPMGVGEYVPVANNLDEAGRQRNRRVELVL--R 477
Query: 186 GNIK 189
+++
Sbjct: 478 SDMQ 481
>gi|26987958|ref|NP_743383.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas putida
KT2440]
gi|148546495|ref|YP_001266597.1| peptidoglycan-associated lipoprotein [Pseudomonas putida F1]
gi|60392879|sp|P0A138|PAL_PSEPK RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
Precursor
gi|60392880|sp|P0A139|PAL_PSEPU RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
Precursor
gi|24982671|gb|AAN66847.1|AE016313_6 peptidoglycan-associated lipoprotein OprL [Pseudomonas putida
KT2440]
gi|663068|emb|CAA52294.1| OprL protein [Pseudomonas putida]
gi|148510553|gb|ABQ77413.1| Peptidoglycan-associated lipoprotein [Pseudomonas putida F1]
gi|313497575|gb|ADR58941.1| OprL [Pseudomonas putida BIRD-1]
Length = 166
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 22/166 (13%)
Query: 17 GCGLASREKK-KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
GC + + N N E +
Sbjct: 21 GCSSKGGDNAGEGAAVDPNAGYGANTGAVDGSLSEEAALRA------------------- 61
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I L+ + + L + A L + + ++ +TD GT + N+ + + RA
Sbjct: 62 ITTFYFEYDSSDLKPEAMRALDVHAKDLKANGN-RVVLEGNTDERGTREYNMALGERRAK 120
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+ + S + + + + P+ T + + N+R+E++
Sbjct: 121 AVQRYLVLQ-GVSPAQLELVSYGEERPVATGNDEQSWAQNRRVELR 165
>gi|260769389|ref|ZP_05878322.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
gi|260614727|gb|EEX39913.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
Length = 316
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L L +A LN+ P + I HTDS G+ N +S RA
Sbjct: 210 DALSFDSSSLNATQQQALSTLAEKLNQQPQAQVLIIGHTDSTGSDAYNTKLSTRRAQAAA 269
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L++ V+ +R I V G PIDTN T GR +N+R+E+QI
Sbjct: 270 DVLMENQVAEHR-IKVFGEGQTRPIDTNTTPAGRAHNRRVEVQI 312
>gi|288553786|ref|YP_003425721.1| flagellar motor protein MotS [Bacillus pseudofirmus OF4]
gi|34485061|gb|AAB94398.2| channel protein [Bacillus pseudofirmus OF4]
gi|288544946|gb|ADC48829.1| Flagellar motor rotation protein motS [Bacillus pseudofirmus OF4]
gi|327187185|dbj|BAK08926.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
Length = 252
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 64/161 (39%), Gaps = 10/161 (6%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIPVHVSFVS-E 85
+ ++ + +D+ +E Q L+ + I +R + + F + E
Sbjct: 82 DEGGFSEEGSNTDEVDMDELLEEVQEFLEVNEMNDVISATRDDRGVVLVLQERTLFETAE 141
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYL 141
L P L+ + T+L+ P+ + ++ HTDS +N +S RA + YL
Sbjct: 142 AELLDSAEPFLEKVGTLLSAIPNM-VKVEGHTDSRPISNFRYPSNWELSGARASSVIRYL 200
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ + G+ P+ N T Q N+R+ I I
Sbjct: 201 VETNDLDPKRFIATGYGDTRPVVPNTTVENLQLNRRVVIVI 241
>gi|86139145|ref|ZP_01057715.1| peptidoglycan-associated lipoprotein [Roseobacter sp. MED193]
gi|85823989|gb|EAQ44194.1| peptidoglycan-associated lipoprotein [Roseobacter sp. MED193]
Length = 166
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 63/185 (34%), Gaps = 25/185 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
K+ + + ++ C + + GS+LD A + +
Sbjct: 4 FKKAFM-LVATLGLAACSNSPWDDTGAGGA------GGLGNIGSNLDPASPAYFQETIGD 56
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + V + L +LQ A L P + IQ H D G
Sbjct: 57 RV----------------LFLVDQSTLNPAAETILQGQARWLTANPDYTVTIQGHADEQG 100
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
T NL + + RA+ + YLI + S+ I V + + P++ + N+R +
Sbjct: 101 TRIYNLALGERRANSAREYLISQ-GISSSRIQVVSYGKERPLEICSAESCYAKNRRA-VT 158
Query: 182 IFPRG 186
+ G
Sbjct: 159 VLAGG 163
>gi|255318428|ref|ZP_05359661.1| OmpA/MotB domain protein [Acinetobacter radioresistens SK82]
gi|262378658|ref|ZP_06071815.1| outer membrane protein [Acinetobacter radioresistens SH164]
gi|255304420|gb|EET83604.1| OmpA/MotB domain protein [Acinetobacter radioresistens SK82]
gi|262299943|gb|EEY87855.1| outer membrane protein [Acinetobacter radioresistens SH164]
Length = 253
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 55/135 (40%), Gaps = 3/135 (2%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ F QL I D + I L +L+ +A L+K
Sbjct: 122 QQPYRFNAQLSVNQAEQKIIDDALKNRIVE--FESGSAVLTAAGRQILEEMAVALHKVGG 179
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ I HTDS G N L+SQERA + +YLI + +S G P+ N T
Sbjct: 180 KKVKIIGHTDSSGDGNKNFLLSQERAMAVCNYLIAK-NIKAENLSTEGMGSSKPVADNTT 238
Query: 169 KVGRQNNQRIEIQIF 183
GR+ N+RIE ++
Sbjct: 239 AEGRKKNRRIEFEVL 253
>gi|149193957|ref|ZP_01871055.1| OmpA/MotB [Caminibacter mediatlanticus TB-2]
gi|149135910|gb|EDM24388.1| OmpA/MotB [Caminibacter mediatlanticus TB-2]
Length = 256
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 75/175 (42%), Gaps = 11/175 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-V 83
+K + K+ +T R ++ + + E + I + + +P ++F
Sbjct: 74 QKATPIVKNEETAQTVNRLQQAITEFK-EMTQAGKGNAITLQEGEEGFFIRLPADITFAP 132
Query: 84 SEVFLEK-KFLPMLQLIATILNKF--PSTVIAIQSHTDSIGT-----LKNNLLISQERAD 135
+ L L+ IA I+ ++ + I I+ +TD++ ++N +S RA
Sbjct: 133 GSAEITNQDSLLFLKRIAIIIKEYLPKNIDIQIRGYTDNLPPPKNSPYRDNWDLSAARAL 192
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ LI + + +S + +PI +N T GR N+R+EI F + N ++
Sbjct: 193 SVLKILI-KDGVDPKQLSAAAYGEYHPIASNLTPEGRDKNRRVEIWFFAKKNKEE 246
>gi|285018158|ref|YP_003375869.1| flagellar motor protein [Xanthomonas albilineans GPE PC73]
gi|283473376|emb|CBA15881.1| probable flagellar motor protein [Xanthomonas albilineans]
Length = 317
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 65/169 (38%), Gaps = 7/169 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
S + L ++ ++ + +Q I V R G I I
Sbjct: 100 ATSLPRPADALRDEQQLRRAQQQLDRIAERLDSALSPLIQKKLITVHRSGLWIEVEINSD 159
Query: 80 VSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERA 134
+ F L++ L +A IL P+ + ++ +TD+ +N +S RA
Sbjct: 160 ILFGSGSATLDQSAHATLAQLAQILASVPNG-VRVEGYTDNTPIATAQFPSNWELSAARA 218
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +G+ +R +S+ G+ P +NDT GR N+R+ + I
Sbjct: 219 ASVVHLFADQGLQPSR-LSMIGYGQFRPHASNDTASGRNANRRVVLVIL 266
>gi|148555047|ref|YP_001262629.1| peptidoglycan-associated lipoprotein [Sphingomonas wittichii RW1]
gi|148500237|gb|ABQ68491.1| Peptidoglycan-associated lipoprotein [Sphingomonas wittichii RW1]
Length = 175
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 73/180 (40%), Gaps = 16/180 (8%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ L + +IS C E+ + TG
Sbjct: 8 KIVLVSALALSISACAKKKPEELPPPPATTAPAPAPEAPLPP-------------PSTGP 54
Query: 64 VVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V D ++ + F ++ ++ + +L A+ L K+P+ + ++ H D GT
Sbjct: 55 VPGSRADFLSQAGTDTIHFATDAYDVDAEDQAILTRQASWLAKYPNVSVTLEGHCDERGT 114
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IEIQ 181
+ NL + + RA+ K++L+ GVS++R ISV + + P+ T + N+R + I
Sbjct: 115 REYNLALGERRANAAKNFLVSAGVSASR-ISVISYGKERPVATGSDEAAWAQNRRAVTIV 173
>gi|317048731|ref|YP_004116379.1| DotU family type IV / VI secretion system protein [Pantoea sp.
At-9b]
gi|316950348|gb|ADU69823.1| type IV / VI secretion system protein, DotU family [Pantoea sp.
At-9b]
Length = 412
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 54/139 (38%), Gaps = 7/139 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPS 108
+ + ++ + V D + F S + ++ ++Q IA +N
Sbjct: 259 LKTFLKPEIDAGLVAVRDEADQSVVTLKGDGLFTSGATTVRGRYEAVIQRIAAAMNNVSG 318
Query: 109 TVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I + ++D++ +N +S RA +++ L Q+ R + G P+
Sbjct: 319 -KILVVGYSDNVPIRSARFASNYELSLARAQSVQTLLQQQLTQPAR-VKAEGRGESNPLV 376
Query: 165 TNDTKVGRQNNQRIEIQIF 183
N + R N+R+EI +
Sbjct: 377 PNTSAENRARNRRVEITLL 395
>gi|258405280|ref|YP_003198022.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM
5692]
gi|257797507|gb|ACV68444.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692]
Length = 322
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 11/135 (8%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+++ + V+ + + ++ ++ L +L + P +
Sbjct: 178 KEVETRTVYVTNTDTPLPMADKDDVGMIFFQFDKASIQDQYTDELDEYVALLRRNPQMEL 237
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN----- 166
I+ HTD IG+ K NL +S +RA + Y + R S+ + +G+ + PI N
Sbjct: 238 LIEGHTDIIGSEKYNLDLSLQRAMAVHDYFV-RHNISSERLRTKGYGFNKPIAPNFTQNR 296
Query: 167 -DTKVGRQNNQRIEI 180
D GR NN+R+E+
Sbjct: 297 KDNPEGRANNRRVEL 311
>gi|149277383|ref|ZP_01883524.1| outer membrane protein 3a [Pedobacter sp. BAL39]
gi|149231616|gb|EDM36994.1| outer membrane protein 3a [Pedobacter sp. BAL39]
Length = 657
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + L + L + TIL P I + +HTD+ GT + N+ +S R
Sbjct: 541 IVLKDVLYEFDKADLTELSKGKLDYLYTILIDNPDIDIELSAHTDNKGTAEYNMDLSNRR 600
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQIFPR 185
A YL+ +G+ + R S +G+ P+ N D GR N+R E ++ +
Sbjct: 601 AQSCLDYLVTKGIPAERMTS-KGYGLTKPVAPNQFSDGKDNPEGRAMNRRTEFKVLKK 657
>gi|149279859|ref|ZP_01885986.1| putative flagellar motor protein MotB [Pedobacter sp. BAL39]
gi|149229449|gb|EDM34841.1| putative flagellar motor protein MotB [Pedobacter sp. BAL39]
Length = 289
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 53/128 (41%), Gaps = 5/128 (3%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + ++ + ++ + + L IA I+ + + I+ +TD++
Sbjct: 143 VDVQVLKGVVYISLSDNMLYKSGSYEISDVAGQTLAKIAKIIKDYQGYDVLIEGNTDNVP 202
Query: 122 TLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NN +S RA + L + ++ G P+ ND++ G+ N+R
Sbjct: 203 ISQTNIRNNWDLSALRASSVVQALQNTYSVDPKRLTAGGRGEYNPVAGNDSEAGKMKNRR 262
Query: 178 IEIQIFPR 185
+I I P+
Sbjct: 263 TQIIITPK 270
>gi|134283190|ref|ZP_01769891.1| ompA family protein [Burkholderia pseudomallei 305]
gi|134245385|gb|EBA45478.1| ompA family protein [Burkholderia pseudomallei 305]
Length = 312
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 152 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 211
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K S + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 212 TGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRTSNIALSQARADAVKGYLV 271
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI ND+ GR N+RIE +
Sbjct: 272 TK-GIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEFR 309
>gi|89053531|ref|YP_508982.1| hypothetical protein Jann_1040 [Jannaschia sp. CCS1]
gi|88863080|gb|ABD53957.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 799
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 67/185 (36%), Gaps = 14/185 (7%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
T ++ R + ++ + + + + L+ V GD
Sbjct: 617 TALAQLAAEERTRAELEAAEVERLAAEAQELERYRSEFFGRLRELLEGRD-GVRIEGDRF 675
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDSIG---- 121
+ V L + L ++ +A +L + +I + HTD
Sbjct: 676 VFS-SEVLFEVGSADLATEGLAQIENVAALLLEIAVDIPEAIDWIIRVDGHTDDQQLREG 734
Query: 122 -TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
T NN +SQ RA + Y+ + R ++ GF PI NDT G+ N+RIE+
Sbjct: 735 ATYANNWELSQARALAVVLYMSEELGIPPRRLAATGFGEHRPIAPNDTDEGQAANRRIEL 794
Query: 181 QIFPR 185
++ R
Sbjct: 795 KLTER 799
>gi|152990958|ref|YP_001356680.1| peptidoglycan-associated lipoprotein [Nitratiruptor sp. SB155-2]
gi|151422819|dbj|BAF70323.1| peptidoglycan-associated lipoprotein [Nitratiruptor sp. SB155-2]
Length = 182
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 66/191 (34%), Gaps = 17/191 (8%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD---IVNKRFGSSLDKAEDEFQ 55
+K L ++ I I+GC + + + E +
Sbjct: 1 MKARHILTSAVVIGFLITGCAKKVEVEAPQTQATQQQEATEVTEGSGIQTIGNDQEMIEE 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAI 113
+L R I + + P ++ A + N + I +
Sbjct: 61 AKL--------RKMKAIEAQSKKIYFDFDKYNIRPDQQPRVEFDAKLFNSDEAKPFNIKV 112
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ + D GT + N + +RA ++ L RGV+ +R ++ + P+ T TK
Sbjct: 113 EGNCDEWGTDEYNYALGLKRAKSVRDALAARGVAKDRM-TLISYGESNPVCTEHTKECWA 171
Query: 174 NNQRIEIQIFP 184
N+R+E ++ P
Sbjct: 172 KNRRVEFELIP 182
>gi|126668169|ref|ZP_01739130.1| Flagellar motor protein [Marinobacter sp. ELB17]
gi|126627318|gb|EAZ97954.1| Flagellar motor protein [Marinobacter sp. ELB17]
Length = 279
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 64/168 (38%), Gaps = 8/168 (4%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV 86
S+ V++ + E + ++ + V + +F+ +
Sbjct: 101 DERSTSDGVTPVSEGVITLASSLIRELENEVASGALNVDYDEHQVIIRFSEDATFMSGDA 160
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLI 142
++K+ LP+++ + +L + + +TD ++N +S RA + L+
Sbjct: 161 TIKKEMLPIIERVVDVLKNCRG-DVVVAGYTDDRPIASSRYRSNWDLSAARAVSVVHELV 219
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ G A P+ N++ R N+R+EI I RG I K
Sbjct: 220 LNRDVPADRVIAAGRAETNPLVPNNSPENRAVNRRVEIAI--RGPICK 265
>gi|163942243|ref|YP_001647127.1| flagellar motor protein MotB [Bacillus weihenstephanensis KBAB4]
gi|163864440|gb|ABY45499.1| OmpA/MotB domain protein [Bacillus weihenstephanensis KBAB4]
Length = 261
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 64/175 (36%), Gaps = 7/175 (4%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L S + KK ++ + + + + + +
Sbjct: 83 LSASSLESEKIKKDA--EAEVKKQEMNELKAVQKGIDKYIEEKQLSSSFKTDLTEKGLMV 140
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++ +L I + HTD++ +N +
Sbjct: 141 TILENVLFDSGKADVKLESLGIAKEMSNLLVSASPREITVSGHTDNVPISNAQFASNWEL 200
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT G+ N+R+E+ I P
Sbjct: 201 STQRAVNFMQVLLQNKELQPEKFSAVGYGEYRSIAPNDTPEGKAKNRRVEVFILP 255
>gi|319647377|ref|ZP_08001599.1| YtxE protein [Bacillus sp. BT1B_CT2]
gi|317390724|gb|EFV71529.1| YtxE protein [Bacillus sp. BT1B_CT2]
Length = 229
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 65/204 (31%), Gaps = 24/204 (11%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFL------------------HKSNDTDIVNKRFGSS 46
+ L + + K K + + K
Sbjct: 27 ITLILVFFILLFSMSQIDLNKFKAAVGSFQDRADGKSVAELKKDAGDQKAEKTAKSQDDL 86
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNK 105
L K D + + I R + + V F + L+ + P+L IA +L
Sbjct: 87 LKKINDYIEKNELSSLIAAKRDERGVILVLQEAVLFDSGKADLKDQAHPLLHKIAVLLKS 146
Query: 106 FPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ I ++ HTDS N +S RA + Y + + G+A
Sbjct: 147 VSN-PIRVEGHTDSRPISTYRFPSNWELSAARASTVIGYFTSKEKLDSSRFLAIGYADTK 205
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
P+ N T+ + N+R+EI I +
Sbjct: 206 PVRDNRTESHMKENRRVEIVIAKQ 229
>gi|291617923|ref|YP_003520665.1| YtxE [Pantoea ananatis LMG 20103]
gi|291152953|gb|ADD77537.1| YtxE [Pantoea ananatis LMG 20103]
gi|327394329|dbj|BAK11751.1| flagellar motor protein YtxE [Pantoea ananatis AJ13355]
Length = 413
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
+ + ++ + + V D + F + ++ ++Q +A +N
Sbjct: 260 LKSFLKPEIDEGLVAVRDEADQSVVTLKGDGLFASGSTEVRGRYDAVIQRVAEAMNNVSG 319
Query: 109 TVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I + ++D++ +N +S RA +++ L ++ +R + G +P+
Sbjct: 320 -KILVVGYSDNVPIRSARFASNYELSLARAQSVQTLLQKQLAKPSR-VKAEGRGETHPLV 377
Query: 165 TNDTKVGRQNNQRIEIQI 182
N + R N+R+EI +
Sbjct: 378 PNTSAENRARNRRVEITL 395
>gi|237744908|ref|ZP_04575389.1| outer membrane protein [Fusobacterium sp. 7_1]
gi|229432137|gb|EEO42349.1| outer membrane protein [Fusobacterium sp. 7_1]
Length = 166
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ ++ + I + ++ ++ ML + + K +
Sbjct: 9 NALEINKMEALKEEPPEEMTIVLDDRALNFDFDKSVVKPQYNEMLTNLKDFIEKN-DYEV 67
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I HTD I + N+ +S+ RA+ +K+ LI+ G+ +R + + + PI N T G
Sbjct: 68 TIVGHTDYIASNAYNMGLSKRRAEAVKAKLIELGLDPSRIVGIVPRGEEEPIADNATTEG 127
Query: 172 RQNNQRIEIQIFPRGN 187
R N+R+E ++ RG+
Sbjct: 128 RAKNRRVEFKLVKRGS 143
>gi|255038084|ref|YP_003088705.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254950840|gb|ACT95540.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 648
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 2/136 (1%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + I + ++ T + + + + L + IL P+
Sbjct: 513 LTKELTDTTFNVTIKLDKLELNKTFVLENIYYDLDKYNIRPDAAIELDKLVQILKDNPTM 572
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-T 168
I + SHTD+ T N+ +SQ RA+ +YL + + +G+ + I N T
Sbjct: 573 TIELSSHTDARATDAYNMTLSQNRAESAVAYLNSK-GIEADRMEAKGYGERELIIPNAKT 631
Query: 169 KVGRQNNQRIEIQIFP 184
+ Q N+R E I
Sbjct: 632 EEEHQRNRRTEFTILS 647
>gi|311278468|ref|YP_003940699.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
gi|308747663|gb|ADO47415.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
Length = 160
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 61/183 (33%), Gaps = 27/183 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K + + ++GC K E ++
Sbjct: 1 MLKRFIAPVLLAVFFLTGCQAPQG-------------------------KFSPEQVAAMK 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + + +A+ L T + HTD+
Sbjct: 36 SLGFS-ESEGDWSLGLSDKILFSTNDYQLNTQSRQQIAAMASRLAATGITHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RAD + + ++ +G KYP+ +N T GR N+R+
Sbjct: 95 YGEDSYNEALSLKRADRVADAWAEGARIPRGNLTTQGLGKKYPVASNATAQGRSENRRVT 154
Query: 180 IQI 182
I I
Sbjct: 155 IVI 157
>gi|268315730|ref|YP_003289449.1| OmpA/MotB domain-containing protein [Rhodothermus marinus DSM 4252]
gi|262333264|gb|ACY47061.1| OmpA/MotB domain protein [Rhodothermus marinus DSM 4252]
Length = 211
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 7/123 (5%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS--IGTLKNN 126
G + + + + L + L +A L +FP I+ +TD+ IG
Sbjct: 83 GLRVAVELADDLFAPASATLTDRGRRRLDALAERLARFPEHRFRIEGYTDNVPIGDRLKE 142
Query: 127 LLISQE-----RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S RA + Y I+ V + PI NDT GR+ N+R+ I+
Sbjct: 143 RFPSNWELAAARAATVARYFIEAHGLDPERFEVVSYGPTRPIGPNDTPEGRRLNRRVVIR 202
Query: 182 IFP 184
P
Sbjct: 203 ALP 205
>gi|221638712|ref|YP_002524974.1| hypothetical protein RSKD131_0613 [Rhodobacter sphaeroides KD131]
gi|221159493|gb|ACM00473.1| OmpA/MotB domain protein [Rhodobacter sphaeroides KD131]
Length = 525
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 63/184 (34%), Gaps = 14/184 (7%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
++ + + ++ + + NK + + + L V +GD
Sbjct: 344 ALAQVASEQKRRAELEEAERLRLEAENKDLARFRSEFFGQLRQVLAGRE-GVRVVGDRFV 402
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDS-----IG 121
+ L + + + LN+ +I + HTD+ G
Sbjct: 403 FS-SEVLFEPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFG 461
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++N +S RA + ++ Q ++ GF P+ D+ R N+RIE++
Sbjct: 462 AFRDNWELSSARALSVVRFMQQSLGFPPSRLAATGFGEYRPVTPGDSADARAQNRRIELK 521
Query: 182 IFPR 185
+ R
Sbjct: 522 LTER 525
>gi|254428548|ref|ZP_05042255.1| peptidoglycan-associated lipoprotein, putative [Alcanivorax sp.
DG881]
gi|196194717|gb|EDX89676.1| peptidoglycan-associated lipoprotein, putative [Alcanivorax sp.
DG881]
Length = 190
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 53/165 (32%), Gaps = 3/165 (1%)
Query: 18 CGLASREKKKVFLHK-SNDTDIVNKRFGSSLDKAEDEFQM-QLQDTGIVVSRIGDMITCY 75
C E S TD + + + L T
Sbjct: 20 CSSTPTEDDTSATDNMSQQTDTSPVTPVEPSEPVKPDTSSIPLTADNFYNHPSNYDGTTD 79
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
V + L+ AT L + I ++ H D GT + N+ +S+ R+
Sbjct: 80 SRVIYFAFDSNTVPAAAFETLRAHATYLKNNANAKIRLEGHADERGTREYNVALSERRSK 139
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
++ +L + ++ + + + + P ++ N+R+EI
Sbjct: 140 AVEKFLRVQ-GVASSQLEIVSYGEEKPAAFGHGEMDWAKNRRVEI 183
>gi|53723969|ref|YP_104341.1| OmpA domain-containing protein [Burkholderia mallei ATCC 23344]
gi|67640679|ref|ZP_00439477.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|121600594|ref|YP_991404.1| ompA family protein [Burkholderia mallei SAVP1]
gi|124386056|ref|YP_001027695.1| ompA family protein [Burkholderia mallei NCTC 10229]
gi|126450255|ref|YP_001082667.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|167001412|ref|ZP_02267211.1| ompA family protein [Burkholderia mallei PRL-20]
gi|167908671|ref|ZP_02495876.1| ompA family protein [Burkholderia pseudomallei NCTC 13177]
gi|217424718|ref|ZP_03456215.1| ompA family protein [Burkholderia pseudomallei 576]
gi|237814018|ref|YP_002898469.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|254174698|ref|ZP_04881359.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|254201416|ref|ZP_04907780.1| ompA family protein [Burkholderia mallei FMH]
gi|254206758|ref|ZP_04913109.1| ompA family protein [Burkholderia mallei JHU]
gi|254357247|ref|ZP_04973521.1| ompA family protein [Burkholderia mallei 2002721280]
gi|52427392|gb|AAU47985.1| OmpA domain protein [Burkholderia mallei ATCC 23344]
gi|121229404|gb|ABM51922.1| ompA family protein [Burkholderia mallei SAVP1]
gi|124294076|gb|ABN03345.1| ompA family protein [Burkholderia mallei NCTC 10229]
gi|126243125|gb|ABO06218.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|147747310|gb|EDK54386.1| ompA family protein [Burkholderia mallei FMH]
gi|147752300|gb|EDK59366.1| ompA family protein [Burkholderia mallei JHU]
gi|148026311|gb|EDK84396.1| ompA family protein [Burkholderia mallei 2002721280]
gi|160695743|gb|EDP85713.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|217392174|gb|EEC32199.1| ompA family protein [Burkholderia pseudomallei 576]
gi|237502962|gb|ACQ95280.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|238521446|gb|EEP84897.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|243062825|gb|EES45011.1| ompA family protein [Burkholderia mallei PRL-20]
Length = 310
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 150 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 209
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K S + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 210 TGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRTSNIALSQARADAVKGYLV 269
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI ND+ GR N+RIE +
Sbjct: 270 TK-GIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEFR 307
>gi|315922614|ref|ZP_07918854.1| predicted protein [Bacteroides sp. D2]
gi|313696489|gb|EFS33324.1| predicted protein [Bacteroides sp. D2]
Length = 405
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
++ D + I C + V + + K L IA ++ + + + I+
Sbjct: 280 EEILDLVVAQKTIAGKTICAVDVINFEFGKSAINKNSYAYLDKIAMLMQRT-NLSVEIKG 338
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD++G N+ +S++RA + YLI++ + +S + PI +NDT+ GR N
Sbjct: 339 HTDNVGKEDFNMELSRKRAKAVYDYLIKK-GVGSSKLSYTYYGMTKPIASNDTEEGRLIN 397
Query: 176 QRIEIQI 182
+R+E +I
Sbjct: 398 RRVEFEI 404
>gi|167921266|ref|ZP_02508357.1| OmpA family protein [Burkholderia pseudomallei BCC215]
Length = 524
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 405 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 464
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 465 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIP 511
>gi|124002652|ref|ZP_01687504.1| OmpA/MotB [Microscilla marina ATCC 23134]
gi|123991880|gb|EAY31267.1| OmpA/MotB [Microscilla marina ATCC 23134]
Length = 352
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ S+ ++ +L + +L K+P + I ++ HTD++G ++NL++S+ RA ++
Sbjct: 237 VLFAFSKAEIKTVSFSILDEVVRLLKKYPKSNIHLEGHTDNVGKDQSNLILSKNRAASVR 296
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
Y I + + I+ G + PIDTN T GRQNN+R+++
Sbjct: 297 QYFINK-GINANRITSIGHGEQRPIDTNTTAKGRQNNRRVDMV 338
>gi|115376920|ref|ZP_01464141.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|310825376|ref|YP_003957734.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|115366099|gb|EAU65113.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|309398448|gb|ADO75907.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
Length = 374
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ VS + V F E L L +A L + + I+ HTD
Sbjct: 236 QGELKVSEDARGTVLTLSGSVLFASGEDDLLPSARSKLSEVAEALKPTHN-RLTIEGHTD 294
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ G + N +S RA+ ++++L+ + + + VRG P+ +N T GR NN+R+
Sbjct: 295 AQGADRFNEDLSFRRAERVRNFLVSQ-GVAANRVEVRGLGEYRPVASNSTAEGRANNRRV 353
Query: 179 EIQIFPRGN 187
EI I RG+
Sbjct: 354 EI-ILQRGD 361
>gi|59714347|ref|YP_207122.1| outer membrane porin F [Vibrio fischeri ES114]
gi|197336792|ref|YP_002158803.1| outer membrane porin F [Vibrio fischeri MJ11]
gi|59482595|gb|AAW88234.1| outer membrane porin F [Vibrio fischeri ES114]
gi|197314044|gb|ACH63493.1| outer membrane porin F [Vibrio fischeri MJ11]
Length = 202
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 64/196 (32%), Gaps = 15/196 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + + + ++GC ++ ++ +D + D + +
Sbjct: 1 MKQSIYPLIIASLFLTGCVSGDKD-----YIETPTSDQIADLRDDDNDGVINA-RDICPG 54
Query: 61 T--GIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
T G + G + + F ++ +A L ++P T I +
Sbjct: 55 TPRGAQIDNDGCAEYVEHSDKKDLKILFANDSSEISPIFKTEIRTMAEFLEEYPETSIQL 114
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
Q G + N+ +S+ RA + + + I GF D+ V
Sbjct: 115 QGFASQQGNAEYNIRLSELRAAAV-RVALIEYGVDPQRIETIGFGDTLLTAKGDSAVSHA 173
Query: 174 NNQRIEIQIFP-RGNI 188
N+R+ + +G++
Sbjct: 174 LNRRVVATVVGFKGDV 189
>gi|254460338|ref|ZP_05073754.1| OmpA domain protein [Rhodobacterales bacterium HTCC2083]
gi|206676927|gb|EDZ41414.1| OmpA domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 594
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
L+ +L +A IL K P + I +TDS G N +SQ RA + +
Sbjct: 456 FEPGSGNLDASAESILDDMAEILIKCPDDMRMEISGYTDSQGREVMNQELSQTRAQAVLT 515
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L +R V +R++ +G+ + PI N T+ GR+ N+RIE ++
Sbjct: 516 ALRERRVLMSRYV-AKGYGEENPIGDNSTEAGREANRRIEFKLI 558
>gi|110639098|ref|YP_679307.1| peptidoglycan-associated lipoprotein [Cytophaga hutchinsonii ATCC
33406]
gi|110281779|gb|ABG59965.1| peptidoglycan-associated lipoprotein [Cytophaga hutchinsonii ATCC
33406]
Length = 673
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E ++ + + ++ + + L+ L + +L + P
Sbjct: 540 EKTSSQEITQN-LALKKLAVGNVYVLRNIYFDFDKATLKSASNKELNNLLQLLKQNPEME 598
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK- 169
I I HTDS G+ + N ++S++RA + ++L+ + S + G+ P+ +ND +
Sbjct: 599 IEISGHTDSKGSDEYNRVLSRKRAQAVVNWLVSK-GISKNRLKFEGYGESRPLASNDDEL 657
Query: 170 VGRQNNQRIEIQIFPR 185
GR+ N+R E +I +
Sbjct: 658 EGRELNRRTEFKILKK 673
>gi|308062402|gb|ADO04290.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
Cuz20]
Length = 179
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 64/184 (34%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S I+GC + + + + S +K E + + + +
Sbjct: 1 MKRSSVFSFLAAFLFIAGC----KHNMDKETVAGDVSAKTVQSAPVSTEKQEPKEEPKQE 56
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 57 PAPVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ LI + I F P T T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALIIK-GVEKDMIKTISFGETKPKCTQKTRECYRENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|91776742|ref|YP_546498.1| OmpA/MotB [Methylobacillus flagellatus KT]
gi|91710729|gb|ABE50657.1| OmpA/MotB [Methylobacillus flagellatus KT]
Length = 1402
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 62/165 (37%), Gaps = 11/165 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
+ + S+L++ Q V++R +
Sbjct: 64 PAPAERQGPTSYPLPSGINSSALERMRAAAANVPQAEPQVLTR----LVENSGAAQFESG 119
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG-------TLKNNLLISQERADVI 137
+ L + L+ +A L + I I HTD+ ++N +S+ R+ +
Sbjct: 120 KADLTDSSVAALEQLAAQLQGKKNVRIDIAGHTDNQRLSPNARKIFRDNQGLSEARSLAV 179
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++L Q+ + +S+ G+ P+ +NDT G N+R+ I++
Sbjct: 180 AAFLKQKLGLEDSQLSISGYGESQPVTSNDTPEGMAQNRRVIIRV 224
>gi|332529393|ref|ZP_08405354.1| ompa/motb domain-containing protein [Hylemonella gracilis ATCC
19624]
gi|332041191|gb|EGI77556.1| ompa/motb domain-containing protein [Hylemonella gracilis ATCC
19624]
Length = 203
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 3/182 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ M ++GC + + T ++
Sbjct: 20 QVLAVMTAAIVLAGCAASVQAPAPQAETAPATTGQAPAAAPAATPAPAAAAPKPEAKPQP 79
Query: 64 VVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
V + + + L+ + + L +A + HTDSIG
Sbjct: 80 DVVLTSPLGVKQVETVTVFFDFDKSELKPEAIASLDTLAAKAKGRTVEATIVVGHTDSIG 139
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
T + NL +S RA+ +K++L + ++ + G P NDT GR N+R +I+
Sbjct: 140 TPEYNLKLSVRRAEAVKAHLTAQ-GINSASVFTEGKGLTAPARPNDTAEGRAVNRRADIE 198
Query: 182 IF 183
+
Sbjct: 199 LV 200
>gi|162453582|ref|YP_001615949.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161164164|emb|CAN95469.1| probable outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 323
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 3/165 (1%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
++R + + + + ++ + L++ V + + V
Sbjct: 157 SARLQAESARTAAEKARQEAEAARREAERVANAALASLKEIAA-VKEEKRGVVITLSGAV 215
Query: 81 SF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
F + L L +A L S I I+ HTDS G+ + N +S ERAD +K+
Sbjct: 216 LFASGKSELLPIAKEKLSQVAATLKDQGSPPIRIEGHTDSTGSAQANRKLSLERADAVKA 275
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+LI I+ G P+ N + GR NN+R+EI + P
Sbjct: 276 HLITA-GLPGDKIATVGHGPDRPVADNSSTEGRANNRRVEIIVNP 319
>gi|149279062|ref|ZP_01885196.1| outer membrane protein, OmpA/MotB family [Pedobacter sp. BAL39]
gi|149230341|gb|EDM35726.1| outer membrane protein, OmpA/MotB family [Pedobacter sp. BAL39]
Length = 439
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT-CYIPVHVSFVSEVFLEKKFLPMLQL 98
G+ +D + + ++++ + I + + + +K L
Sbjct: 297 GTPAGTVVDGSGCPLKTPAPVEKVIITEADRRVVDEAIKNLEFDLGKAVIRQKSYATLNR 356
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A +L + + + + HTD+ G++ NL +S++RA+ +K+YL+ +G +++R I G+
Sbjct: 357 VAALLIE-KNFSLKLAGHTDNTGSMALNLRLSKDRAESVKAYLVSQGANASR-IEATGYG 414
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
PI TN T GRQ N+R+E +
Sbjct: 415 PNQPIATNKTAAGRQANRRVEFTL 438
>gi|67459626|ref|YP_247250.1| peptidoglycan-associated lipoprotein precursor [Rickettsia felis
URRWXCal2]
gi|67005159|gb|AAY62085.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia felis
URRWXCal2]
Length = 156
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 32/183 (17%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K ++ L+ + ++GC R + + + + K F +
Sbjct: 1 MKITKITLAFLALFVLAGCNTKKRVPQMDGMMNQGEETSLMKDF------------EKHA 48
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ L K L+ A L+K P ++ H D
Sbjct: 49 GNAVW----------------FAFDSSALSPKAKEELERQACWLSKHPEVKATVEGHCDE 92
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-I 178
GT + NL + + RA K +L +G+ +R ++ + P +T+ N+R +
Sbjct: 93 RGTREYNLGLGERRAAAAKKFLAHKGIDHSRLNTIS-YGKDRPAMMGNTEEAFAYNRRAV 151
Query: 179 EIQ 181
+
Sbjct: 152 TVV 154
>gi|296117356|ref|ZP_06835946.1| peptidoglycan-associated lipoprotein [Gluconacetobacter hansenii
ATCC 23769]
gi|295976122|gb|EFG82910.1| peptidoglycan-associated lipoprotein [Gluconacetobacter hansenii
ATCC 23769]
Length = 157
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 61/176 (34%), Gaps = 26/176 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M +L + + ++ C K + GS D
Sbjct: 1 MRLKLLGAAGMALFLAACS---DHTNKAVNTGAATQQQTGPVPGSEAD------------ 45
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+V+ GD + +++ L L A L K+P I I + D
Sbjct: 46 ---LVANAGDRV-------FFELNQNSLSADAKATLDRQAAWLAKYPQVNIQIAGNCDDR 95
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
GT + NL + Q RA+ YL+ +GV+++R I+ + P D + N+
Sbjct: 96 GTEEYNLALGQRRANAAHDYLVAKGVAASR-ITTISYGKDRPTAPGDDEASWSQNR 150
>gi|281602014|gb|ADA74998.1| putative outer membrane protein [Shigella flexneri 2002017]
Length = 160
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 63/183 (34%), Gaps = 27/183 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L +F ++GC K E +Q
Sbjct: 1 MIKHLVAPLIFTSLILTGCQSPQG-------------------------KFTPEQVAAMQ 35
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G GD + ++ L + +Q +A L T + HTD+
Sbjct: 36 SYGFT-ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 94
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ G ++ +G KYPI +N T GR N+R+
Sbjct: 95 YGEDSYNEGLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 154
Query: 180 IQI 182
+ I
Sbjct: 155 VVI 157
>gi|167571440|ref|ZP_02364314.1| ompA family protein [Burkholderia oklahomensis C6786]
Length = 308
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 148 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 207
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K S + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 208 TGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRASNIALSQARADAVKGYLV 267
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI +NDT GR N+RIE +
Sbjct: 268 AK-GIASQQLTTTGVGPDQPIASNDTNDGRARNRRIEFR 305
>gi|327187188|dbj|BAK08928.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
Length = 252
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 64/161 (39%), Gaps = 10/161 (6%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIPVHVSFVS-E 85
+ ++ + +D+ +E Q L+ + I +R + + F + E
Sbjct: 82 DEGGFSEEGSNTDEVDMDELLEEVQEFLEVNEMNDVISATRDDRGVVLVLQERTLFETAE 141
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYL 141
L P L+ + T+L+ P+ + ++ HTDS +N +S RA + YL
Sbjct: 142 AELLDSAEPFLEKVGTLLSAIPNM-VKVEGHTDSRPISNFRYPSNWELSGARASSVIRYL 200
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ + G+ P+ N T Q N+R+ I I
Sbjct: 201 VETNDLDPKRFIATGYGDTRPVVPNTTVENLQLNRRVVIVI 241
>gi|256820715|ref|YP_003141994.1| membrane-bound proton-translocating pyrophosphatase [Capnocytophaga
ochracea DSM 7271]
gi|256582298|gb|ACU93433.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga ochracea
DSM 7271]
Length = 919
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E ++D + + L + L+ I IL +P
Sbjct: 785 EAHLVKLIEDKNLTTLEQFKDNWITLDRTYFKTGSDELTEGSEQQLKNIVAILKAYPKAA 844
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTK 169
I + +TD+ G+++ N +S+ RA+ + + L+ ++ +S +G+ ++P+ NDT
Sbjct: 845 IRLGGYTDNTGSVEGNKKLSERRANSVLNKLVAL-GANKAQLSAQGYGAEHPLCPANDTP 903
Query: 170 VGRQNNQRIEIQIFPR 185
+ N+RI+I++ +
Sbjct: 904 ECKAKNRRIDIRLTAK 919
>gi|146339724|ref|YP_001204772.1| putative Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Bradyrhizobium
sp. ORS278]
gi|146192530|emb|CAL76535.1| Conserved hypothetical protein; Putative Outer membrane protein and
related peptidoglycan-associated (lipo)proteins
[Bradyrhizobium sp. ORS278]
Length = 707
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 66/163 (40%), Gaps = 10/163 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A + +K++ D + G + + + +
Sbjct: 554 SAEQVRKELADAGGGDIKLAGVTIG---------LKPESPPLAVAECQPAFEGLLAKGRI 604
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
L ++ L +L I + + I I+ HTD++G +N+ +S+ RA + S
Sbjct: 605 RFATGSAELSRESLALLDHIVDVAQRCKEAEITIEGHTDNVGNEADNIDLSKRRAAAVVS 664
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
Y+ + G+ ++R S G+ P+ +ND+ GR N+RIE +
Sbjct: 665 YISEAGIDTSRMSS-EGYGQNRPVASNDSAEGRAQNRRIEFVV 706
>gi|326336319|ref|ZP_08202490.1| outer membrane protein A [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691493|gb|EGD33461.1| outer membrane protein A [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 666
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 6/115 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + + + L I ++ + P+ IAI+SHTDS G+ + NL +S R
Sbjct: 551 FGIEIIYFDFDKSNIRSDAEVDLAKIVEVMKEHPNIKIAIKSHTDSRGSDQYNLALSDRR 610
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTND---TKVGRQNNQRIEIQIF 183
A I + + ++ +G+ + +ND T+ Q N+R E I
Sbjct: 611 AKSTLE-WIVKQGITRSRLTAKGYGETQLVNGCSNDVPCTEEEHQKNRRSEFIIT 664
>gi|160880837|ref|YP_001559805.1| OmpA/MotB domain-containing protein [Clostridium phytofermentans
ISDg]
gi|160429503|gb|ABX43066.1| OmpA/MotB domain protein [Clostridium phytofermentans ISDg]
Length = 275
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Query: 69 GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTL 123
G + I + + + L+ + LP+ + IL + I++ HTD++ G
Sbjct: 150 GQYVLINISGSLLYDSGKAQLKSEALPIFSKVGDILKTYKGYRISVIGHTDNVPVTSGIY 209
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++N +S RA YLI I G PI N ++ GR N+RIEI+I
Sbjct: 210 RSNKELSSARAINAAEYLIDVKGIDPSNIEWIGRGEYDPIADNSSEAGRSKNRRIEIRI 268
>gi|76809643|ref|YP_335000.1| OmpA family domain-containing protein [Burkholderia pseudomallei
1710b]
gi|226198194|ref|ZP_03793765.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|254190435|ref|ZP_04896943.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254259878|ref|ZP_04950932.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|254300689|ref|ZP_04968134.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|76579096|gb|ABA48571.1| OmpA family domain protein [Burkholderia pseudomallei 1710b]
gi|157810473|gb|EDO87643.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|157938111|gb|EDO93781.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|225929714|gb|EEH25730.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|254218567|gb|EET07951.1| ompA family protein [Burkholderia pseudomallei 1710a]
Length = 310
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 150 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 209
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K S + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 210 TGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRTSNIALSQARADAVKGYLV 269
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI ND+ GR N+RIE +
Sbjct: 270 TK-GIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEFR 307
>gi|107100572|ref|ZP_01364490.1| hypothetical protein PaerPA_01001597 [Pseudomonas aeruginosa PACS2]
gi|313106086|ref|ZP_07792343.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
gi|310878845|gb|EFQ37439.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
Length = 158
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 62/180 (34%), Gaps = 28/180 (15%)
Query: 5 LGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L L++F + ++GC + E LQ+ G
Sbjct: 2 LALALFSLVLGLTGCQTKPPQTG-----------------------LSAEQIAVLQEQGF 38
Query: 64 VVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ G + V F + L L IA L + ++ HTD+ G
Sbjct: 39 ELRDEGWE--FGMSSKVLFGNNLDRLNPDSRNTLTKIAHALLAVDIDKVRLEGHTDNYGD 96
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA+ + + + I VRG P+ N T+ GR N+R+ I +
Sbjct: 97 EGYNQKLSERRAESVAAVFREA-GMPAANIEVRGLGMSKPVADNKTRAGRSENRRVAIIV 155
>gi|126173146|ref|YP_001049295.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|125996351|gb|ABN60426.1| OmpA/MotB domain protein [Shewanella baltica OS155]
Length = 485
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 47/108 (43%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + + + P+L+++A+ L + P+ + HTD G N +S+ RA
Sbjct: 373 TLEGLLFDYDSERMLPESKPVLEVLASYLKQHPTLSFYVVEHTDDKGERSYNQSLSERRA 432
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L + ++ G P+ +N G++ N+R+E+ +
Sbjct: 433 AAVIKQLSDGFQIPSAQLTAHGNGEYSPVASNTNDAGQKLNRRVELVL 480
>gi|327187194|dbj|BAK08932.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
Length = 252
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 64/161 (39%), Gaps = 10/161 (6%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIPVHVSFVS-E 85
+ ++ + +D+ +E Q L+ + I +R + + F + E
Sbjct: 82 DEGGFSEEGSNTDEVDMDELLEEVQEFLEVNEMNDVISATRDDRGVVLVLQERTLFETAE 141
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYL 141
L P L+ + T+L+ P+ + ++ HTDS +N +S RA + YL
Sbjct: 142 AELLDSAEPFLEKVGTLLSAIPNM-VKVEGHTDSRPISNFRYPSNWELSGARASSVIRYL 200
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ + G+ P+ N T Q N+R+ I I
Sbjct: 201 VETNDLDPKRFIATGYGDTRPVVPNTTVENLQLNRRVVIVI 241
>gi|310817591|ref|YP_003949949.1| outer membrane protein [Stigmatella aurantiaca DW4/3-1]
gi|309390663|gb|ADO68122.1| outer membrane protein [Stigmatella aurantiaca DW4/3-1]
Length = 632
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 13/166 (7%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + + H N + + + V+ D I
Sbjct: 467 GCPAKDADNDTLADHLDNCPNEAGPVDNQGCPAKQKQL----------VAIRQDRIEIK- 515
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERAD 135
+ ++ + +L +A +LN+ P V + I+ HTD G N +S++RAD
Sbjct: 516 EAVYFDSNASTIQARSNGLLDQMAKLLNEHPEIVSVLIEGHTDDRGAADYNRTLSKQRAD 575
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+++GV++ R + +G+ P+ N T GR N+R++
Sbjct: 576 TVRDYLVKKGVAAER-LETQGYGPDRPVQPNTTAAGRTANRRVDFL 620
>gi|146301218|ref|YP_001195809.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146155636|gb|ABQ06490.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 645
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 70/169 (41%), Gaps = 8/169 (4%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM---QLQDTGIVVSRIGDMITCYIPVHVS 81
K V + + +++ + + E E + +L + +V + + +
Sbjct: 477 NKVVNMIAAKPNYSSDEKTVETTKENEGEIKDVNFELSNYDDLVVKKRGVEMVDVQPIYF 536
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ + K + L + I+ KFP+ I I+SHTDS G NL +S RA + Y+
Sbjct: 537 DYDKYDITPKAIEELTKVVFIMQKFPNIKIKIESHTDSRGKDSYNLKLSDNRAKSTRDYI 596
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
+ +G+ ++R S G+ I+ T+ N+R + I +
Sbjct: 597 LSQGIDASRIESAIGYGESRLINKCKNGVKCTEEEHLLNRRSDFIIIQK 645
>gi|327187191|dbj|BAK08930.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
Length = 252
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 64/161 (39%), Gaps = 10/161 (6%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIPVHVSFVS-E 85
+ ++ + +D+ +E Q L+ + I +R + + F + E
Sbjct: 82 DEGGFSEEGSNTDEVDMDELLEEVQEFLEVNEMNDVISATRDDRGVVLVLQERTLFETAE 141
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYL 141
L P L+ + T+L+ P+ + ++ HTDS +N +S RA + YL
Sbjct: 142 AELLDSAEPFLEKVGTLLSAIPNM-VKVEGHTDSRPISNFRYPSNWELSGARASSVIRYL 200
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ + G+ P+ N T Q N+R+ I I
Sbjct: 201 VETNDLDPKRFIATGYGDTRPVVPNTTVENLQLNRRVVIVI 241
>gi|319788654|ref|YP_004148129.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
gi|317467166|gb|ADV28898.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
Length = 348
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + P + + +L + P + ++ HTD G +NL +S+ R++ +
Sbjct: 247 FATDRTEILPESQPQIDQVVELLQQDPQLNLGVEGHTDDTGDAGHNLRLSEGRSNAVVKA 306
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L+ RG+ + R S GF P+ N ++ G+ N+R+E+
Sbjct: 307 LVARGIDAARLTSA-GFGSTRPVADNGSEEGKARNRRVELV 346
>gi|167847521|ref|ZP_02473029.1| ompA family protein [Burkholderia pseudomallei B7210]
Length = 249
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 89 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 148
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 149 TGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARADAVKGYLV 208
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI ND+ GR N+RIE +
Sbjct: 209 TK-GIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEFR 246
>gi|312883339|ref|ZP_07743065.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368955|gb|EFP96481.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 206
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 77/204 (37%), Gaps = 24/204 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASR---EKKKVFLHKSNDTD-----------------IVNK 41
+K + M + ++SGC + + L + TD
Sbjct: 1 MKRFAVVMIL-LSVSGCANMAGKIATLGEDMLDTAPQTDFEVRYPEWGVVPETRRLDTGS 59
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLI 99
RF ++ + Q L+ GI + GD + + + + L ++
Sbjct: 60 RFSQQRPQSYSDLQSFLRKNGIDYELLPGDHMMVKLKDTIKFHTGSASVSSNSRYWLDIM 119
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ L P I I H+D+ G N +S +RA +K L++ VS I RG+
Sbjct: 120 GSYLATQPGIDIVIDGHSDNTGAPSFNDKLSIQRASEVKKQLVRNQVSMGS-IYTRGYGE 178
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF 183
P +N T VG+ N+R+E++
Sbjct: 179 YVPACSNKTSVGKACNRRVEVRFI 202
>gi|262403725|ref|ZP_06080283.1| protein F-related protein [Vibrio sp. RC586]
gi|262350229|gb|EEY99364.1| protein F-related protein [Vibrio sp. RC586]
Length = 199
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 67/196 (34%), Gaps = 25/196 (12%)
Query: 12 MTTISGCGLASRE---------------------KKKVFLHKSNDTDIVNKRFGSSLDKA 50
M ++GCG + + + + R S +D +
Sbjct: 1 MFLLTGCGSLATDRMFNDNLLDVAPKGDFDVRHPEWGNAPQQEVTGKSTASRELSRMDHS 60
Query: 51 E-DEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + L GI + GD + + + L +A L
Sbjct: 61 SYADLRQFLLSNGIAHEVVPGDYPMIKVSNTIRFETGSAKVSASSKRWLDSMARFLASES 120
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I ++ HTD+ G + N +S+ RA + ++ + + I RGF P TN
Sbjct: 121 GIDIVLEGHTDNTGAERFNDKLSERRASAV-KTVLVQSRVAQNAIYTRGFGESVPACTNS 179
Query: 168 TKVGRQNNQRIEIQIF 183
T GR N+R+E++
Sbjct: 180 TVKGRACNRRVEVRFI 195
>gi|239995142|ref|ZP_04715666.1| TolC family type I secretion outer membrane protein [Alteromonas
macleodii ATCC 27126]
Length = 648
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 4/149 (2%)
Query: 39 VNKRFGSSLDKAEDEFQM---QLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLP 94
V+ G+ +D E + + + + I V++ F S + ++
Sbjct: 494 VDSTPGAMVDDFGCEAREPDMAPEPSAADFTLDNAKIINSFNVNIEFASNSTEVLPEYEN 553
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
LQ + LN P++ + I H G N +S+ RA + S L+ + R I+
Sbjct: 554 SLQDVIEALNNDPNSGVIIHGHASLDGDAAYNQRLSERRAKAVASLLMNKANIEARRITA 613
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
G+ P+ ++ N+RIE I
Sbjct: 614 VGYGESRPLVDEESDAANARNRRIEAAII 642
>gi|300778373|ref|ZP_07088231.1| inorganic diphosphatase [Chryseobacterium gleum ATCC 35910]
gi|300503883|gb|EFK35023.1| inorganic diphosphatase [Chryseobacterium gleum ATCC 35910]
Length = 909
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I L+ + L +A ILN +P+ I + +TD+ G ++NL +S RA
Sbjct: 799 TIENLYFETGSSDLKPGYELQLNTLAEILNAYPNLKIKLGGYTDNSGNEESNLSLSNLRA 858
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQIF 183
K L++ GVS++R I G+ ++P+ NDT + N+RI++++
Sbjct: 859 QTAKLKLLELGVSADR-IEAEGYGSQHPVCEANDTDECKAKNRRIDVRVL 907
>gi|242310688|ref|ZP_04809843.1| lipoprotein [Helicobacter pullorum MIT 98-5489]
gi|239523086|gb|EEQ62952.1| lipoprotein [Helicobacter pullorum MIT 98-5489]
Length = 172
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 61/187 (32%), Gaps = 18/187 (9%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L L S+ + GC S ++ G +
Sbjct: 1 MKKSLVLGSLAAALLMVGCSQKSGVDTSASQTQNMQNAQQGYVAG--------------K 46
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHT 117
D + + + + + + + A +L + I+ +T
Sbjct: 47 DNFVNIEDRIQYVENGLQNIFFNFDQFSIRPDMQNAVDNDANVLKDTAANPLTVRIEGNT 106
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + N + +RA +K L+ RGVS + + V + P T+ N++
Sbjct: 107 DEWGTDEYNYALGLKRAVAVKDALVARGVSEGKMVLVS-YGESKPTCMEKTRECWAENRK 165
Query: 178 IEIQIFP 184
+ ++ P
Sbjct: 166 VTFKMLP 172
>gi|167896107|ref|ZP_02483509.1| ompA family protein [Burkholderia pseudomallei 7894]
Length = 243
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 83 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 142
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 143 TGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARADAVKGYLV 202
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI ND+ GR N+RIE +
Sbjct: 203 TK-GIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEFR 240
>gi|322417875|ref|YP_004197098.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18]
gi|320124262|gb|ADW11822.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18]
Length = 198
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 59/197 (29%), Gaps = 16/197 (8%)
Query: 1 MIKELGLSMFI----MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K L + + + +SGC K + S ++
Sbjct: 1 MKKSLKRLVPVLCTGVFIVSGCAKQQAVKADQAVAPSATAQPSAPVQPQQPAASQQASPS 60
Query: 57 QLQDTGIVVSRIG-----------DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
+ + + L L L
Sbjct: 61 TTALSASSIKAEPVQPAAAGSQQGAAAADALEKIYFDFDSDLLSDAARKTLTDNFVKLKA 120
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P+ I ++ + D G+ + NL +S+ RA YL GV ++R +S G+ + P D+
Sbjct: 121 MPNVKIRVEGNCDERGSDEYNLALSERRAQAAVKYLTALGVPASR-LSAIGYGEEKPADS 179
Query: 166 NDTKVGRQNNQRIEIQI 182
+ N+R E I
Sbjct: 180 GHSDDAWARNRRDEFNI 196
>gi|153833067|ref|ZP_01985734.1| outer membrane protein [Vibrio harveyi HY01]
gi|148870635|gb|EDL69542.1| outer membrane protein [Vibrio harveyi HY01]
Length = 204
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 71/197 (36%), Gaps = 12/197 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + + + ++ + + ++ + + D + + T
Sbjct: 1 MKATKILLALGVMLT--THHVTAEDEYEYTETPKAEQIADLQDDDNDGVINA-RDLCPGT 57
Query: 62 GIVVSRIGDMITCYIPV-------HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
D YI + ++ F ++ ++ L ++PST I +Q
Sbjct: 58 PATSEIDNDGCGEYIKSSEKMEVRVLFANDSDEIDPVFRRQIRELSEFLKEYPSTSIELQ 117
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ +G ++NL +S+ RA+ + + + + + GF + + +V
Sbjct: 118 GYASKVGGSEHNLDLSKRRANNV-RAALLGYGIESDRVRIVGFGDTHLAEQGTDEVSHAL 176
Query: 175 NQRIEIQIFP-RGNIKK 190
N+R+ + +G IKK
Sbjct: 177 NRRVTASVIGYKGEIKK 193
>gi|326797243|ref|YP_004315063.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326548007|gb|ADZ93227.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 201
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + ++ +F ++ +A + + + I+ HTD +G N +SQ RAD I
Sbjct: 78 NILFDSGKYVVKPRFYGEVKKLADFMKSNAGSSVVIEGHTDDVGAADYNEALSQNRADAI 137
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
LI + + G+ PI N+T GR N+R+
Sbjct: 138 ADVLINSFKIDRKRVEAIGYGESKPIADNETIDGRATNRRV 178
>gi|261838454|gb|ACX98220.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
51]
gi|315587014|gb|ADU41395.1| peptidoglycan associated lipoprotein [Helicobacter pylori 35A]
gi|317178572|dbj|BAJ56360.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
F30]
gi|317182379|dbj|BAJ60163.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
F57]
Length = 179
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 62/184 (33%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + I+GC ++ + + +K E + +
Sbjct: 1 MKRSSVFSFLVAFLFIAGCKHNMDKETVAGDVSAKAVQSAPVSTETVQEKQEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCTQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|115373807|ref|ZP_01461100.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca
DW4/3-1]
gi|115369206|gb|EAU68148.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca
DW4/3-1]
Length = 663
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 13/166 (7%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + + H N + + + V+ D I
Sbjct: 498 GCPAKDADNDTLADHLDNCPNEAGPVDNQGCPAKQKQL----------VAIRQDRIEIK- 546
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERAD 135
+ ++ + +L +A +LN+ P V + I+ HTD G N +S++RAD
Sbjct: 547 EAVYFDSNASTIQARSNGLLDQMAKLLNEHPEIVSVLIEGHTDDRGAADYNRTLSKQRAD 606
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+++GV++ R + +G+ P+ N T GR N+R++
Sbjct: 607 TVRDYLVKKGVAAER-LETQGYGPDRPVQPNTTAAGRTANRRVDFL 651
>gi|52081472|ref|YP_080263.1| flagellar motor protein MotS [Bacillus licheniformis ATCC 14580]
gi|52786848|ref|YP_092677.1| flagellar motor protein MotS [Bacillus licheniformis ATCC 14580]
gi|52004683|gb|AAU24625.1| YtxE [Bacillus licheniformis ATCC 14580]
gi|52349350|gb|AAU41984.1| YtxE [Bacillus licheniformis ATCC 14580]
Length = 229
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 65/204 (31%), Gaps = 24/204 (11%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFL------------------HKSNDTDIVNKRFGSS 46
+ L + + K K + + K
Sbjct: 27 ITLILVFFILLFSMSQIDLNKFKAAVGSFQDRADGKSAAELKKDAGDQKAEKTAKSQDDL 86
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNK 105
L K D + + I R + + V F + L+ + P+L IA +L
Sbjct: 87 LKKINDYIEKNELSSLIAAKRDERGVILVLQEAVLFDSGKADLKDQAHPLLHKIAVLLKS 146
Query: 106 FPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ I ++ HTDS N +S RA + Y + + G+A
Sbjct: 147 VSN-PIRVEGHTDSRPISTYRFPSNWELSAARASTVIGYFTSKEKLDSSRFLAIGYADTK 205
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
P+ N T+ + N+R+EI I +
Sbjct: 206 PVRDNRTESHMKENRRVEIVIAKQ 229
>gi|309782736|ref|ZP_07677457.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
gi|308918514|gb|EFP64190.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
Length = 274
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 3/160 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--S 81
+ +V LH + ++ S + A + + ++ + +
Sbjct: 113 DGTQVSLHGDVGNEAQRQQLTSDMATALGQSYTIKNGLRVAAVSEQGLLDQTLANRIIEF 172
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L K +L +A +L + I I HTD+ G+ NL +SQ RA+ +K+YL
Sbjct: 173 ETGSATLTPKGRAILDEMAAVLPRLNGRKIEIVGHTDNSGSRALNLNLSQARAETVKNYL 232
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I + + ++ G P+ N+T GR N+RIE +
Sbjct: 233 IAK-GAEQGTLTAMGVGPDQPVAANNTDEGRSRNRRIEFR 271
>gi|308186535|ref|YP_003930666.1| type VI secretion system, core protein [Pantoea vagans C9-1]
gi|308057045|gb|ADO09217.1| Putative type VI secretion system, core protein [Pantoea vagans
C9-1]
Length = 412
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 54/139 (38%), Gaps = 7/139 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPS 108
+ ++ + V D + F S + ++ +++ IA +N
Sbjct: 259 LRAFLKPEIDAGLVAVRDEADRSVVTLKGDGLFASAATEVRGGYIDVIRRIAAAMNNVSG 318
Query: 109 TVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I + ++D++ +N +S RA +++ L Q+ +R + G P+
Sbjct: 319 -QIQVIGYSDNVPIRSARFASNFELSLARARSVQTLLQQQLAQPSR-VKAEGRGESNPLV 376
Query: 165 TNDTKVGRQNNQRIEIQIF 183
N + R N+R+EI +
Sbjct: 377 PNTSAENRARNRRVEITLL 395
>gi|261879154|ref|ZP_06005581.1| OmpA family protein [Prevotella bergensis DSM 17361]
gi|270334253|gb|EFA45039.1| OmpA family protein [Prevotella bergensis DSM 17361]
Length = 284
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + ++ + ++ + + + L IA I+ + + I+ +TD++
Sbjct: 136 VDVQVLKGVVYISLADNMLYKSGSYEINDRAEETLGKIAKIIMDYKDYDVLIEGNTDNVP 195
Query: 122 TL---------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+NN +S RA + YLI + ++ G PI +NDT +G+
Sbjct: 196 INTSSELMKNIRNNWDLSALRASSVVQYLIDHFGVAPGRLTAGGRGEFNPIASNDTALGK 255
Query: 173 QNNQRIEIQIFPR 185
Q N+R +I I P+
Sbjct: 256 QRNRRTQIIITPK 268
>gi|329946279|ref|ZP_08293873.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328527571|gb|EGF54566.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 416
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 60/172 (34%), Gaps = 8/172 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G G S + + + + + + + +
Sbjct: 244 GSGTYSDSTTSIVNDGTGSAIVNGRTVSAKPVPKAGKVGTFPSIDAAKPVQSCGTVITLE 303
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + L +AT+L + + +Q HTDS+ +N +S++RA
Sbjct: 304 DSVLFDFGSSDLRSEASTTLTNLATVLKDSKAPKVQVQGHTDSVSDDASNQTLSEQRAKA 363
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQI 182
+ L GV++ I G+ P+ N D GR+ N+R+E+ +
Sbjct: 364 VTDALTSDGVTAA--IESVGYGETRPVAPNESSDGFDNPAGRRLNRRVEVFV 413
>gi|293194231|ref|ZP_06609953.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces
odontolyticus F0309]
gi|292819750|gb|EFF78763.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces
odontolyticus F0309]
Length = 403
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 11/174 (6%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--EFQMQLQDTGIVVSRIGDMITC 74
G G S EK + + N T VN + K E + + +
Sbjct: 230 GTGSYSDEKLTIQNNG-NGTATVNGVTVNDAPKVEKVSKLGKFPAVESLKPVESCGTVIT 288
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + + + L+ +A +LN I HTDSI NL +SQERA
Sbjct: 289 LEDGVLFDFGKSDIRPEAAQTLKSLAGVLNNAKVPTAHIYGHTDSISDEAFNLQLSQERA 348
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQI 182
D + + L + GV + + G+ P+ N D GR N+R+EI I
Sbjct: 349 DAVSAELKKDGV--SAILDATGYGESKPVAPNENADGSDNPAGRALNRRVEIFI 400
>gi|239817427|ref|YP_002946337.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110]
gi|239804004|gb|ACS21071.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110]
Length = 168
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 63/177 (35%), Gaps = 20/177 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + +++ CG A + + + +++
Sbjct: 9 RILAIVALAASLAACGTA---------------ATSGREDATYYYSNKAAPVAKVEPPPP 53
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ G + + ++ ++ +++ A+ L P++ + I+ HTD G
Sbjct: 54 APVQNGPALKI----VYFDFDKYDVKPQYRNVVEAHASYLRNRPASKVVIEGHTDLRGGR 109
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL + Q RA+ ++ + + I + + P T+ G Q N+R E
Sbjct: 110 EYNLALGQRRAESVQR-ALTQLGVPGERIEAVSWGIEKPASLETTEEGHQLNRRAEF 165
>gi|152990729|ref|YP_001356451.1| flagellar motor protein MotB [Nitratiruptor sp. SB155-2]
gi|151422590|dbj|BAF70094.1| flagellar motor protein MotB [Nitratiruptor sp. SB155-2]
Length = 234
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 9/138 (6%)
Query: 52 DEFQMQLQDTGI--VVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+E + LQ GI V G+ + + ++ + K+ +
Sbjct: 94 NEIKALLQKAGIAAEVVDHGNKVLLRVNADNLFLPGSAYPTKEAAKYFMEFCKRFKE-SG 152
Query: 109 TVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I I +TD+ +NN +S RA I + RF++ G PI
Sbjct: 153 FRINIIGYTDNQPIHTAEFRNNWELSVYRAINILRLFVS-CGYDKRFLTAEGRGEYDPIA 211
Query: 165 TNDTKVGRQNNQRIEIQI 182
N+T GR N+R+E +
Sbjct: 212 PNNTPQGRAKNRRVEFVV 229
>gi|227540101|ref|ZP_03970150.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Sphingobacterium spiritivorum ATCC 33300]
gi|227239962|gb|EEI89977.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Sphingobacterium spiritivorum ATCC 33300]
Length = 671
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
I+ + + + + + P+L + L PS I + SHTDS T K N+
Sbjct: 551 EKGISFTLENIYYDLDKSNIREDAKPVLNQLVHTLRDNPSLKIELSSHTDSRATAKYNMK 610
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
+SQ RA Y++ +G++ NR I +G+ I+ T Q N+R EI++
Sbjct: 611 LSQNRAQSAVDYIVSQGIARNRII-AKGYGESRLINMCKDGVKCTDAEHQANRRTEIKVL 669
>gi|167740414|ref|ZP_02413188.1| ompA family protein [Burkholderia pseudomallei 14]
Length = 245
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 85 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 144
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 145 TGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARADAVKGYLV 204
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI ND+ GR N+RIE +
Sbjct: 205 TK-GIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEFR 242
>gi|154508489|ref|ZP_02044131.1| hypothetical protein ACTODO_00990 [Actinomyces odontolyticus ATCC
17982]
gi|153798123|gb|EDN80543.1| hypothetical protein ACTODO_00990 [Actinomyces odontolyticus ATCC
17982]
Length = 403
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 63/173 (36%), Gaps = 9/173 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE-DEFQMQLQDTGIVVSRIGDMITCY 75
G G S EK + + + + + + + + +
Sbjct: 230 GTGSYSDEKLTIQNNGNGTATVNGVTINDAPKVEKVGKLGKFPAVESLKPVESCGTVITL 289
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + + L+ +A +LN I HTDSI NL +SQERAD
Sbjct: 290 EDGVLFDFGKSDIRPEAAQTLKSLAGVLNNAKVPTAHIYGHTDSISDEAFNLQLSQERAD 349
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQI 182
+ + L + GV + + G+ P+ N D GR N+R+EI I
Sbjct: 350 AVSAELKKDGV--SAILDATGYGESKPVAPNENADGSDNPAGRALNRRVEIFI 400
>gi|313200972|ref|YP_004039630.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
gi|312440288|gb|ADQ84394.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
Length = 444
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 9/141 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V F L +++ + +
Sbjct: 294 RLSELLATEIAQGKVRVEEDSAHAIVVFKGDGMFSGGLAMLSPATREIVEKVGRAVADVQ 353
Query: 108 STVIAIQSHTDSI------GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ + H+D+ KNN ++S++RA + + + GV ++R I V G
Sbjct: 354 G-RVRVVGHSDNQKLSGKNPEFKNNQILSEKRAQAVVQVMTEMGVDNSR-IEVAGMGDTQ 411
Query: 162 PIDTNDTKVGRQNNQRIEIQI 182
PI +N T GR N+R+EI++
Sbjct: 412 PITSNSTASGRAKNRRVEIEV 432
>gi|304413884|ref|ZP_07395301.1| peptidoglycan-associated lipoprotein [Candidatus Regiella
insecticola LSR1]
gi|304283604|gb|EFL91999.1| peptidoglycan-associated lipoprotein [Candidatus Regiella
insecticola LSR1]
Length = 170
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 17/180 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L L + + ++ C R N + R S + ++ +LQ
Sbjct: 7 LKGLMLVLP-ILVVTACSSNKRGTTDQSAIDPNAATLGMDRENLSGGSSREDQMQRLQRQ 65
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
I + + + +L A L P+ I I+ + D G
Sbjct: 66 NI---------------IYFGYDKYDISAESTSILNEHAAFLRADPAIKIVIEGYADERG 110
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
T + N+ + + RA+ + YL + SN+ IS+ + P+D + N+R +
Sbjct: 111 TPEYNIALGERRANAVSMYLRGQ-GVSNQQISIVSYGKLKPVDLGHDENAYAKNRRAVLV 169
>gi|193212309|ref|YP_001998262.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB
8327]
gi|193085786|gb|ACF11062.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB
8327]
Length = 169
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 55/171 (32%), Gaps = 21/171 (12%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR-I 68
M ++GC S + + +G+ V
Sbjct: 11 AAMIILAGCSSKSAVSTSGDASGAGYGAGADGAT-----------------SGVTVENLS 53
Query: 69 GDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
GD I L + L+ A + K P IQ H D GT + N
Sbjct: 54 GDNAVAGAVIGDIFFDFDSSALSDEAQEQLKQNAAWMEKNPLVNATIQGHCDERGTDEYN 113
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
L + + RA K YLI GVS+ R ++ F + P D + N+R
Sbjct: 114 LALGERRATAAKEYLITAGVSAGR-LTAVSFGEEMPFDPGHNEEAWAKNRR 163
>gi|114778984|ref|ZP_01453771.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Mariprofundus ferrooxydans PV-1]
gi|114550783|gb|EAU53353.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Mariprofundus ferrooxydans PV-1]
Length = 466
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ + + + + + D + + + + +L+L +
Sbjct: 308 QIKREAEAKIAQLAKLFDPSQVELFLTTDADVIIRMKSIHFPSGSAIIPSESYDLLELAS 367
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
++ F + ++ HTDS+G + N +S+ RA +K YL R ++ R I+ GF
Sbjct: 368 KAIDLFGDRAVRVEGHTDSMGNDEYNQNLSERRATTVKEYLDARFSNNKRTITSIGFGEN 427
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
PI N+ GR N+RI+I +
Sbjct: 428 KPIANNEKAEGRSKNRRIDIVLL 450
>gi|95117797|gb|ABF57086.1| Omp22 [Helicobacter pylori]
Length = 179
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 23/184 (12%), Positives = 62/184 (33%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + + ++GC ++ + ++ +K E + +
Sbjct: 1 MKRSSVFGFLVAFLFVAGCKHNMDKETVAGDVSAKTVQSAPVSTETAQEKQEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCTQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|115353202|ref|YP_775041.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115283190|gb|ABI88707.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 243
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 1/127 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + L L + + + +
Sbjct: 115 QPVVQAQPAAEPVAQRHVLLQGSANFAFDSAALTPSARQELDRFLDVNREARFRRVTVTG 174
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+TDS G +N+ +S+ RA + +YL + G P+ +N T GR N
Sbjct: 175 YTDSQGAHAHNVRLSEARARAVATYLRTG-GLHAEHFTTVGKGAAEPVASNATAEGRAQN 233
Query: 176 QRIEIQI 182
+R+EI++
Sbjct: 234 RRVEIEL 240
>gi|332298234|ref|YP_004440156.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
gi|332181337|gb|AEE17025.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
Length = 236
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 57/155 (36%), Gaps = 9/155 (5%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLE-KKFLPMLQ 97
K G S+ +A F ++ I +S + + F L ++ +
Sbjct: 81 GKSLGLSVKRAVSLFAPDVKSNKITLSSDERGLVITLASDSFFAPGSAALNIEETRATVL 140
Query: 98 LIATIL--NKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRF 151
+A L + I+ HTD N +S RA + + + +
Sbjct: 141 RLAQFLSSKELSGRRFRIEGHTDGTPVASKDFPSNWELSAARAVNVL-HYLSDFGVNEAQ 199
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
SV G+A P +NDT GR N+R++I I G
Sbjct: 200 FSVAGYADTRPKFSNDTAEGRAYNRRVDIIILDEG 234
>gi|323497326|ref|ZP_08102344.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
gi|323317409|gb|EGA70402.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
Length = 203
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 78/196 (39%), Gaps = 10/196 (5%)
Query: 2 IKELGLSMFI-MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K+ LS+ ++GC +A + + N D + + A D
Sbjct: 1 MKKTALSLLTTAVLLTGCSIAEDDYAYIDTPVPNQVDDLLDEDKDGVINARDLCPQTPSR 60
Query: 61 TGIVVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + G + ++ F+ ++ +A + +FPST + +Q
Sbjct: 61 S--EIDNDGCGTFINTSEEISLHILFANDSAEVQPVFMTQIREVADFMAEFPSTSVELQG 118
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ +G NL +S++RA ++ L+ GV S+R +++ GF + + N
Sbjct: 119 YASKVGRADYNLELSKQRAFAVEDLLLSYGVDSSR-VNIVGFGDTNLSLEGNDEQVHAQN 177
Query: 176 QRIEIQIFP-RGNIKK 190
+++ I +G +K+
Sbjct: 178 RKVVASIIGHKGQVKE 193
>gi|313681313|ref|YP_004059051.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994]
gi|313154173|gb|ADR32851.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994]
Length = 367
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G V G + + ++ ++ + + A+ L + P+ I HTDS
Sbjct: 246 KGFKVDADGCPLKATLHLN-FATDSTKVDAEGAAKVAEFASFLKESPAYKANIVGHTDST 304
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ N +S++RA +KS LI+ GV S+R ++ G K PI +N TK GR N+RIE+
Sbjct: 305 ASDAYNQKLSEKRAAKVKSMLIEDGVDSSR-LTSEGMGEKMPIASNKTKEGRAENRRIEV 363
Query: 181 QI 182
++
Sbjct: 364 EL 365
>gi|260174346|ref|ZP_05760758.1| OmpA/MotB domain-containing protein [Bacteroides sp. D2]
Length = 375
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
++ D + I C + V + + K L IA ++ + + + I+
Sbjct: 250 EEILDLVVAQKTIAGKTICAVDVINFEFGKSAINKNSYAYLDKIAMLMQRT-NLSVEIKG 308
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD++G N+ +S++RA + YLI++ + +S + PI +NDT+ GR N
Sbjct: 309 HTDNVGKEDFNMELSRKRAKAVYDYLIKK-GVGSSKLSYTYYGMTKPIASNDTEEGRLIN 367
Query: 176 QRIEIQI 182
+R+E +I
Sbjct: 368 RRVEFEI 374
>gi|302878485|ref|YP_003847049.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
ES-2]
gi|302581274|gb|ADL55285.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
Length = 347
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I S ++ L + K+ + +AI HTDS G+ K N +S R
Sbjct: 228 VTIEGANFDTSSAKIKPAADKKLNEVVDFAAKYKESNLAISGHTDSRGSEKLNQKLSLSR 287
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
A+ +K+YL+++GVS+ R I+ +G A P+ N TK GR N+R+EI
Sbjct: 288 AESVKAYLVKKGVSAAR-ITTKGEASTRPVADNKTKAGRAQNRRVEI 333
>gi|167817630|ref|ZP_02449310.1| ompA family protein [Burkholderia pseudomallei 91]
Length = 240
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 80 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 139
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 140 TGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARADAVKGYLV 199
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI ND+ GR N+RIE +
Sbjct: 200 TK-GIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEFR 237
>gi|161830197|ref|YP_001597454.1| ompA family protein [Coxiella burnetii RSA 331]
gi|164685809|ref|ZP_01945857.2| ompA family protein [Coxiella burnetii 'MSU Goat Q177']
gi|165919482|ref|ZP_02219502.1| ompA family protein [Coxiella burnetii RSA 334]
gi|161762064|gb|ABX77706.1| ompA family protein [Coxiella burnetii RSA 331]
gi|164601325|gb|EAX33525.2| ompA family protein [Coxiella burnetii 'MSU Goat Q177']
gi|165916897|gb|EDR35501.1| ompA family protein [Coxiella burnetii RSA 334]
Length = 170
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 72/168 (42%), Gaps = 12/168 (7%)
Query: 15 ISGCGL-ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
+S C + V+ + + K + +LQ G+ V ++G+ +
Sbjct: 1 MSACSSYTTVSSAPVYTIPAPKPSLA---------KIRAHYIHRLQADGVQVIKLGETMR 51
Query: 74 CYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ F L + P L+ +A ++ + + + ++TD+ G ++ ++
Sbjct: 52 FVLLSDCLFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYTDNNGHIERQQALTTR 111
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+A V+ S+L R + R G+ K P+D N + GR NN+R+EI
Sbjct: 112 QAQVVASFLWSR-GINARLAYAVGYNRKNPVDYNGSSHGRFNNRRVEI 158
>gi|291567193|dbj|BAI89465.1| OmpA/MotB domain protein [Arthrospira platensis NIES-39]
Length = 285
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
SR G+ + +P + F L +L + L + V+ + HTD G+ +
Sbjct: 165 SRSGNGLIMTLPSDILFNPGSSTLRPGANVILDNLIPDLQNYRGAVVRVAGHTDDSGSRQ 224
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
NL++S +A+ I YL G+ P N + + RQ N+RIE+ I P
Sbjct: 225 QNLVLSSAQAEAIVQYLSNAVDDQAYHWVAIGYGMTRPALENTSDINRQLNRRIEVAITP 284
>gi|83944241|ref|ZP_00956696.1| OmpA domain protein [Sulfitobacter sp. EE-36]
gi|83844785|gb|EAP82667.1| OmpA domain protein [Sulfitobacter sp. EE-36]
Length = 317
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/177 (22%), Positives = 68/177 (38%), Gaps = 5/177 (2%)
Query: 10 FIMTTISGCGLASR--EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ T + S + + + V + + A D + +
Sbjct: 142 AVATLLVSTTDTSAYLQIVEADAQGQASSPSVPEVAEDTRTLAPDAPAQSQSEMAAALQN 201
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G ++ + L + L +A +L P I + HTDS+G L+NN+
Sbjct: 202 TGHVVLAALD---FGTGTAALGQGEFDALSNLAAVLKDQPDLRIVLVGHTDSVGGLQNNI 258
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ RA ++ LI + I +G Y PI +N TK GR N+R+E + P
Sbjct: 259 ALSRSRAAAVRRRLITAHGIAGDRIEAQGMGYLSPIASNQTKAGRDANRRVEAVLLP 315
>gi|237799262|ref|ZP_04587723.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str.
1_6]
gi|237806231|ref|ZP_04592935.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331022118|gb|EGI02175.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331027345|gb|EGI07400.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 296
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 9/179 (5%)
Query: 19 GLASREK--KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
E K+ + + + D F ++ + V I +
Sbjct: 75 STKPAEPLLKESEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIEL 134
Query: 77 PVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQ 131
+ F + K +++ ++ I+ +F I ++ TD N +S
Sbjct: 135 NSSLLFVSGDAMPSDKAFTIIEKVSDIVKRF-DNPIHVEGFTDDQPIRTAQFPTNWELSS 193
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
R+ I L GV+ R SV G+ P+ +N T GR N+R+ + I ++++
Sbjct: 194 ARSASIVRMLAMDGVNPARLASV-GYGEFQPVASNATAAGRAKNRRVVLVISRNLDVRR 251
>gi|194365634|ref|YP_002028244.1| flagellar motor protein MotD [Stenotrophomonas maltophilia R551-3]
gi|194348438|gb|ACF51561.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
Length = 338
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+AS+ + V +H ++ S D+ + I V R I I
Sbjct: 106 SMASQMRMPVSVHNQEQIARAERQLSSIADRLTAALAPLIDRGMISVRRTELWIEVEINS 165
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L+ L +A +L P+ + ++ HTD++ +N +S R
Sbjct: 166 DILFPTGSAALDVHARQTLASLAEVLRDVPN-SVRVEGHTDNVPIATATFPSNWELSAGR 224
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + +GV +R +++ G+ P + ND+ GR N+R+ + I
Sbjct: 225 AASVVHLFADQGVQPSR-LAMVGYGQFRPREENDSAQGRNRNRRVMVIIL 273
>gi|83953282|ref|ZP_00962004.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
gi|83842250|gb|EAP81418.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
Length = 317
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 65/175 (37%), Gaps = 1/175 (0%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
+ T + S ++ + + D Q + + +
Sbjct: 142 AVATLLVSTTDTS-AYLQIVEADAQGQASSPSVPEVAEDTQALAPDAPAQSQSEMAAALQ 200
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + L + L +A +L P I + HTDS+G L+NN+ +
Sbjct: 201 NTGHVVLAALDFGTGTAALGQGEFDALANLAAVLKDQPDLRIVLVGHTDSVGGLQNNIAL 260
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S+ RA ++ LI + I +G Y PI +N TK GR N+R+E + P
Sbjct: 261 SRSRAAAVRRRLITAHGIAGDRIEAQGMGYLSPIASNQTKAGRDANRRVEAVLLP 315
>gi|319778561|ref|YP_004129474.1| OmpA/MotB domain protein [Taylorella equigenitalis MCE9]
gi|317108585|gb|ADU91331.1| OmpA/MotB domain protein [Taylorella equigenitalis MCE9]
Length = 959
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 9/161 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ T + SS DE L + + + I V
Sbjct: 683 DTNFPTPAEQPADQTAPAEQATTSSETAQTDELANVLDISEMSKENLDLHI-------VF 735
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ ++ K+ L A L + + I +TD+ G ++N +S ERA+ +++YL
Sbjct: 736 DSASSDIQPKYNDRLDAFAKYLIE-SNRTGEISGYTDNQGDDESNKKLSAERANSVRNYL 794
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +GV ++V G+ PI N+T GR N+RIE +
Sbjct: 795 VSKGVPETNIVAV-GYGEANPIADNNTPEGRLANRRIEFNV 834
>gi|323525290|ref|YP_004227443.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323382292|gb|ADX54383.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 168
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 33/185 (17%)
Query: 2 IKELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L + ++GC ++ L+K+
Sbjct: 1 MKKLLATSACAMSVLFMAGCTAPLNRDTEMSLNKAA------------------------ 36
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
GI V+ + + + +P + ++ + ++ A +L + I ++ +T
Sbjct: 37 ---GIEVAPVANGVAVKLPETALFDFNKSEVRPDASAVVDRSAVLLKRSKK-PIIVEGYT 92
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D++GTL+ N +S+ RA + L+ RGV R I +G AY P+ +NDT GR N+R
Sbjct: 93 DNVGTLEYNQQLSEARAVAVGYALVARGVPMER-IRTKGNAYNNPVASNDTPEGRALNRR 151
Query: 178 IEIQI 182
EI +
Sbjct: 152 TEIVV 156
>gi|91787861|ref|YP_548813.1| OmpA/MotB [Polaromonas sp. JS666]
gi|91697086|gb|ABE43915.1| OmpA/MotB [Polaromonas sp. JS666]
Length = 180
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 62/177 (35%), Gaps = 8/177 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ S+ + T+ CG + ++ SS +Q+ T +
Sbjct: 9 SIFSSLALAATLVACGSNVKLSDVPVEDRTASAKPSGDAGASSSRGVAP---VQIGGTDV 65
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
G V ++ +F +++ A L + +AI+ HTD G
Sbjct: 66 S----GAGPANTARVIYFDFDSYVIKPEFQGIVEAHARYLTANKARKMAIEGHTDERGGR 121
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL + Q R++ ++ + ++ + F + P T + N+R EI
Sbjct: 122 EYNLALGQRRSEAVRR-ALGLLGVADAQVEAVSFGKEKPAATGSDEDSMAKNRRAEI 177
>gi|86141364|ref|ZP_01059910.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
MED217]
gi|85831923|gb|EAQ50378.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
MED217]
Length = 276
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 5/133 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L D I ++ ++ I + F + + +L +AT++ P ++ H
Sbjct: 129 LNDEDIEINVEKGVVYVSISDKLLFNSGRWDVTNRAKEVLGKVATVVKNKPDIEFMVEGH 188
Query: 117 TDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TDS ++N +S +RA + L + + G +Y P+ +NDT GR
Sbjct: 189 TDSQPISTSVIEDNWDLSVKRATSVVRILQEEFGVPPERMVAAGRSYYVPLASNDTAEGR 248
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 249 ARNRRTRIVVLPK 261
>gi|307579950|gb|ADN63919.1| outer membrane protein P6 precursor [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 149
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
V + ++K+F +L A L PS I +Q +TD G+ + N+ + + R
Sbjct: 39 LRQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDERGSREYNIALGERR 98
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + Y +Q +S+ ++V + + P+ T T+ N+R+EI +
Sbjct: 99 GNSVL-YSLQANGASSGQLNVVSYGEERPVCTESTESCWSRNRRVEIVYTAK 149
>gi|167920717|ref|ZP_02507808.1| ompA family protein [Burkholderia pseudomallei BCC215]
Length = 247
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 87 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 146
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 147 TGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARADAVKGYLV 206
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI ND+ GR N+RIE +
Sbjct: 207 TK-GIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEFR 244
>gi|160939630|ref|ZP_02086978.1| hypothetical protein CLOBOL_04522 [Clostridium bolteae ATCC
BAA-613]
gi|158437421|gb|EDP15185.1| hypothetical protein CLOBOL_04522 [Clostridium bolteae ATCC
BAA-613]
Length = 281
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 69/176 (39%), Gaps = 5/176 (2%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+ G G + E + L ++ + R + + + + + V+ + +
Sbjct: 72 VVGEGAQAPEDAEAPLQQTQQQYQASAREMADMARDIQTYFDSENLDAV-VTNSENAVYI 130
Query: 75 YIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI---S 130
+ F L ML + +L + ++AI + + + + S
Sbjct: 131 RFKNDLLFAPDNANLTDASKSMLDAVGIMLKEKQDNILAIYINGHTAQAANSLINDRLLS 190
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
ERAD + YL ++ + + RG+ YPI N T+ GR+ N+R+++ I G
Sbjct: 191 SERADNVAIYLEEQVGIPPKKLICRGYGKYYPIADNTTREGREQNRRVDMIILGTG 246
>gi|317486290|ref|ZP_07945122.1| OmpA family protein [Bilophila wadsworthia 3_1_6]
gi|316922460|gb|EFV43714.1| OmpA family protein [Bilophila wadsworthia 3_1_6]
Length = 340
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 4/170 (2%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
IS + + N + K L K++ + D
Sbjct: 174 VISVASSPEGQATLDAIAALNACSVSVKAI--DLLKSDAAVDKFVGDVFCQERVAVVEDV 231
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + L + +L A I+ + P+ + + TDSIGT NL +SQ R
Sbjct: 232 VVLRGVNFAFDKYDLTPEAQGILNEAARIIMEHPNMKVQLLGWTDSIGTDAYNLKLSQRR 291
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
AD +K+YL+ +GV ++R I++ G + N+T+ GR N+R E+
Sbjct: 292 ADAVKNYLVAQGVPASRMIAI-GKGKSF-RYDNNTEEGRYMNRRTELVFM 339
>gi|226952046|ref|ZP_03822510.1| OmpA/MotB domain protein [Acinetobacter sp. ATCC 27244]
gi|226837203|gb|EEH69586.1| OmpA/MotB domain protein [Acinetobacter sp. ATCC 27244]
Length = 255
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ + + L + ++ + D I L + +L +A LNK
Sbjct: 128 RFNAQLSVNLAEQKVIDDALKDRIIE------FESGSAILTEAGKRILDEMAVALNKVGG 181
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ I HTDS G N+++S+ERA ++ YL+ + ++++R +S G PI N T
Sbjct: 182 KQVKIIGHTDSSGDASRNVILSKERAVAVQDYLVSKNIATDR-LSTEGKGSSEPIADNAT 240
Query: 169 KVGRQNNQRIEIQIF 183
GR+ N+RIE ++
Sbjct: 241 ADGRRKNRRIEFEVL 255
>gi|226945712|ref|YP_002800785.1| peptidoglycan-associated outer membrane lipoprotein [Azotobacter
vinelandii DJ]
gi|226720639|gb|ACO79810.1| peptidoglycan-associated outer membrane lipoprotein [Azotobacter
vinelandii DJ]
Length = 179
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 52/165 (31%), Gaps = 7/165 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + + + + + I
Sbjct: 21 GCSSKGGD-----ASGEGADANGGVDPNAGYGANTSGYGSGSGSSYDSGMGSDEAALRAI 75
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + ++ HTD GT + N+ + + RA
Sbjct: 76 TTFYFEYDSSDLKPEAMRALDVHARDLKGN-GARVVLEGHTDERGTREYNMALGERRAKA 134
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+ + S + + + + P+ + N+R+E++
Sbjct: 135 VQRYLVLQ-GVSPAQLELVSYGEERPVAGGADEQSWAQNRRVELR 178
>gi|302387785|ref|YP_003823607.1| OmpA/MotB domain protein [Clostridium saccharolyticum WM1]
gi|302198413|gb|ADL05984.1| OmpA/MotB domain protein [Clostridium saccharolyticum WM1]
Length = 262
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 64/180 (35%), Gaps = 14/180 (7%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLD------KAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
KV + T + G + D + + + + ++R
Sbjct: 64 DAKVTEGEGKLTGGIPDDGGGATDFDELYLVLKQIVEDRNMQDSVEITRGDGFTFISFRD 123
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQ-------SHTDSIGTLKNNLLIS 130
V F L ++ +L A +++ ++ +Q ++N+ ++S
Sbjct: 124 KVFFDGDSSVLRQEGKDVLTQFAAAMSQANKSIKEVQVLGHTSQGDPQRPNNIRNDRMLS 183
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+R+ + YL + S + F PI DT+ GR N+R+EI I ++K
Sbjct: 184 AQRSAEVIIYLQSQNAVSPEKLVGMSFGQFRPIAQFDTEEGRAQNRRVEILITKNDTVEK 243
>gi|297580458|ref|ZP_06942385.1| OmpA family protein [Vibrio cholerae RC385]
gi|297536104|gb|EFH74938.1| OmpA family protein [Vibrio cholerae RC385]
Length = 207
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 72/203 (35%), Gaps = 24/203 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREK-------------------KKVFLHKSNDTDIVNKR 42
+K + + ++GCG ++ + +T ++
Sbjct: 4 MK--FWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWGYAPQKNTSVMPNA 61
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIA 100
+ ++ + L GI + GD + V + L +A
Sbjct: 62 MTQPRSASYEDLRQYLSSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVA 121
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L I ++ HTD+ G+ K N +++ RA+ + + + + I RGF
Sbjct: 122 RFLATESGIDIVLEGHTDNTGSEKLNDKLAERRANAV-KAALVQSRVAQNAIYTRGFGEN 180
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P TN TK GR N+R+EI+
Sbjct: 181 VPACTNSTKNGRACNRRVEIRFI 203
>gi|283850887|ref|ZP_06368173.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. FW1012B]
gi|283573810|gb|EFC21784.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. FW1012B]
Length = 171
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 54/149 (36%), Gaps = 4/149 (2%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ G+S ++ E + +L+ + ++G + L +
Sbjct: 24 AKKAGGPGDGSGTSWEEQE---RARLEQERALREKMGQAANELAQMINFAFDSSNLTPEA 80
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+L A I+ ++P + ++ + D GT + NL + + RA + +
Sbjct: 81 RQILTRKADIMKQYPQIKVIVEGNCDQRGTAEYNLALGERRAQAAAQ-YLSNLGIPADRL 139
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S + + P+D + N+R E +
Sbjct: 140 STVSYGKERPLDPGTGEAAYAKNRRDEFR 168
>gi|294504689|ref|YP_003568751.1| putative OmpA family protein [Yersinia pestis Z176003]
gi|262362751|gb|ACY59472.1| putative OmpA family protein [Yersinia pestis D106004]
gi|294355148|gb|ADE65489.1| putative OmpA family protein [Yersinia pestis Z176003]
Length = 186
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 71/185 (38%), Gaps = 9/185 (4%)
Query: 5 LGLSMFIMTTISGCG--LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
L I+ T GC L+ E + + +V + + + ++
Sbjct: 2 LLCGFLIVATFIGCKYFLSVPESDLLKRMGALQRVVVTPPVAAPKLRLSILLKDEIAKQL 61
Query: 63 IVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V + + V + + + +++ +A +++ I I HTDS+
Sbjct: 62 VSVDETSNNSKVIFKGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGA-ILIVGHTDSMP 120
Query: 122 TLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
K N ++S++RA + Y+ ++ I G P+ +ND GR N+R
Sbjct: 121 INKPGFPNNQVLSEKRAANVARYM-EQAGIPTDKIRFEGKGETQPVSSNDDATGRSQNRR 179
Query: 178 IEIQI 182
+EI +
Sbjct: 180 VEIFV 184
>gi|152995178|ref|YP_001340013.1| flagellar motor protein MotB [Marinomonas sp. MWYL1]
gi|150836102|gb|ABR70078.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
Length = 330
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 6/134 (4%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + + IT I SF L F+P++ LI +L T I+
Sbjct: 159 MREEVSKGTVEIETQEQTITIRIKDQGSFESGSAELNYDFIPVIDLIRDVLVGIQGT-IS 217
Query: 113 IQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++ HTD++ ++N +S RA + L G +V G+A P+ NDT
Sbjct: 218 VEGHTDNVPIASSRFRSNWQLSSARAISVAEELFSTGQLDQGRFAVTGYADTRPLVPNDT 277
Query: 169 KVGRQNNQRIEIQI 182
R N+R+EI I
Sbjct: 278 PAHRATNRRVEIII 291
>gi|300775912|ref|ZP_07085772.1| OmpA family protein [Chryseobacterium gleum ATCC 35910]
gi|300505462|gb|EFK36600.1| OmpA family protein [Chryseobacterium gleum ATCC 35910]
Length = 277
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 6/136 (4%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ D + V + ++ + + + + + +L +A ++N + + I+
Sbjct: 128 DNVSDEDVQVKVLKGVVMISLSDKMLYKTGDYNILPAAQEVLGKVAKVINDYDKYSVLIE 187
Query: 115 SHTDSIGTLKNN-----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+TD+ N +S R + L + I+ G + P TN +
Sbjct: 188 GNTDNAPLNSPNLPRDNWDLSALRGTSVAKVLQTQFGVDPARITAGGRSEYNPKATNMSV 247
Query: 170 VGRQNNQRIEIQIFPR 185
GR N+R EI I P+
Sbjct: 248 SGRAENRRTEIIIMPK 263
>gi|295681046|ref|YP_003609620.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. CCGE1002]
gi|295440941|gb|ADG20109.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. CCGE1002]
Length = 444
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 59/150 (39%), Gaps = 7/150 (4%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQ 97
V + + ++ ++V G +V + + + P+L
Sbjct: 296 VAAPVAHERLRLSILLKDEIARGQVLVEENGSSSRVVFRGDYVFLPGQSRIRPELDPVLS 355
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFIS 153
+A + + + + HTD+ +N ++S++RA + + GV + R ++
Sbjct: 356 RVAQEVARVGG-KVTVTGHTDNQPIHTAEFPDNQVLSEKRAAFVADVMKAHGVPAIRIVA 414
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ G P+ N T GR N+R+E+ +
Sbjct: 415 I-GKGDIQPVADNTTAEGRSRNRRVEVFVT 443
>gi|237756519|ref|ZP_04585048.1| chemotaxis protein MotB [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691319|gb|EEP60398.1| chemotaxis protein MotB [Sulfurihydrogenibium yellowstonense SS-5]
Length = 264
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 11/166 (6%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIPVHVSFV 83
+ V ++ + K ++ + ++ + + V I + I ++ F
Sbjct: 64 SAPPSIIEGVGVKQKREDAKKKIKERVEQIIKKLNLEGKVSVEVIPMGVRIRILDYILFP 123
Query: 84 S-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQERADVI 137
+ +++ +L IA ++ + + ++ HTD I +N +S RA +
Sbjct: 124 PCSTEINQEYKELLNGIAEVIKE-AKLPVEVEGHTDDIPPGPTCIYPSNWELSASRAAAV 182
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
YLI G S G+A PI N++++GR+ N+RIEI +
Sbjct: 183 VRYLITAGNLPPYLFSAVGYADTKPISPNNSELGRKLNRRIEINLI 228
>gi|300771828|ref|ZP_07081699.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300761214|gb|EFK58039.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 650
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + + P+L +A + P + + SHTDS T K N+ +SQ R
Sbjct: 535 FVLENIYYDLDKYNIRDDAKPILNQLARTMRDNPGLRVELSSHTDSRATAKYNMKLSQSR 594
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
A Y++ RG++ NR I +G+ ++ T+ Q N+R EI+I
Sbjct: 595 AQSAVDYIVSRGIARNRLI-AKGYGESQLVNNCKDGVSCTEAQHQANRRTEIKIL 648
>gi|153870010|ref|ZP_01999498.1| OmpA/MotB [Beggiatoa sp. PS]
gi|152073520|gb|EDN70498.1| OmpA/MotB [Beggiatoa sp. PS]
Length = 296
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L + L+ + I + HTDSIG N +S++RA +
Sbjct: 186 DVTFAFDKAALTPQAKTTLEGLINEFGLDFIKGIEVIGHTDSIGKDSYNQKLSEQRAASV 245
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
YL V++++ I+ G + P+ NDT+ GR N+R+EI+I P
Sbjct: 246 VRYLQVLNVNTSK-INGWGEGERNPVAPNDTREGRAQNRRVEIKIEP 291
>gi|90577941|ref|ZP_01233752.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
gi|90441027|gb|EAS66207.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
Length = 347
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L ++ LQ + L ++PS + + +T + G++ N +S++RA + L+
Sbjct: 227 DGKHLTQEDKQRLQPMIQRLTRYPSATVEVTGYTSNTGSVAYNQKLSEKRAKNVAD-LLS 285
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ V+ I+ +G PI TNDT GR N+R+EI
Sbjct: 286 QYVADASQITAKGMGEANPIATNDTAKGRAENRRVEIY 323
>gi|86139070|ref|ZP_01057641.1| OmpA domain protein [Roseobacter sp. MED193]
gi|85824301|gb|EAQ44505.1| OmpA domain protein [Roseobacter sp. MED193]
Length = 640
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ +L IA+IL K + IQ HTDS G N +SQ RA I +
Sbjct: 500 FEPGSATVAGGSSVVLDHIASILEKCGPIRLEIQGHTDSQGREGMNQALSQSRAQSILNE 559
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L R + ++ FI++ G+ PI +ND++ GR+ N+RIE ++
Sbjct: 560 LRARRIRTSAFIAI-GYGESQPIASNDSEEGREANRRIEFRLI 601
>gi|328958204|ref|YP_004375590.1| flagellar motor protein MotB [Carnobacterium sp. 17-4]
gi|328674528|gb|AEB30574.1| flagellar motor protein MotB [Carnobacterium sp. 17-4]
Length = 249
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 7/132 (5%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSH 116
+ + S + + F ++ I +LN+ + I ++ +
Sbjct: 107 NDSVTTSIEERGLVLSFNDALFFDSGNAEIKADQQNKFVDIGKLLNQPALKDSFIRVEGY 166
Query: 117 TDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TDS K+N +S RA + +I + +SV G+ P N T GR
Sbjct: 167 TDSVPVSNPKYKSNWDLSVLRASNVAQIIINDSGINPNRVSVVGYGEYRPKSDNKTNEGR 226
Query: 173 QNNQRIEIQIFP 184
N+R++I I
Sbjct: 227 VENRRVDILILN 238
>gi|152966787|ref|YP_001362571.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
gi|151361304|gb|ABS04307.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
Length = 471
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 58/167 (34%), Gaps = 9/167 (5%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+G G + E L + + + + + D G V+ D++
Sbjct: 225 TGTGTGTAEDGPAPLDPDGAATAAVRPLEVYAEDLQGTVRTETSDAGARVALAADVL--- 281
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L + +L+ AT + +A+ HTD G NL +S+ RA
Sbjct: 282 -----FALDSAELSPEARAVLETAATDVLTRRPGPVAVVGHTDDQGADDYNLDLSRRRAQ 336
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L + + + V G P + R N+R+E+ +
Sbjct: 337 AVADVLGPLLGA-DYPLQVDGRGEAEPAVPGPSTEARARNRRVELVV 382
>gi|213961761|ref|ZP_03390027.1| OmpA family protein [Capnocytophaga sputigena Capno]
gi|213955550|gb|EEB66866.1| OmpA family protein [Capnocytophaga sputigena Capno]
Length = 290
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 5/133 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L D + V ++ I + F + K +L+ +A ++ P ++ H
Sbjct: 136 LDDQDVDVKVEKGVVFINISDKMLFSSGSYTISKNAKSVLEKVAKVVKNKPDFEFMVEGH 195
Query: 117 TDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD+ G +++N +S RA I L + + ++ G +Y P+ +N GR
Sbjct: 196 TDNVNIKTGCIRDNWDLSVMRATEIVRVLQKDFGVAPERMTAAGRSYYVPLASNGDANGR 255
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 256 ALNRRTRIVVLPK 268
>gi|167838085|ref|ZP_02464944.1| ompA family protein [Burkholderia thailandensis MSMB43]
Length = 243
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 83 DGTQIDVKGEVRNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 142
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K + + I HTD+ G +N+ +SQ RAD + +
Sbjct: 143 TGSATLTPQGRAILDQMAAALAKMSNRTVEIIGHTDNSGNRTSNIALSQARADAV-KGYL 201
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+++ ++ G PI +ND+ GR N+RIE +
Sbjct: 202 VAKGIASQQLTTTGVGPDQPIASNDSADGRARNRRIEFR 240
>gi|262065804|ref|ZP_06025416.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693]
gi|291380509|gb|EFE88027.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693]
Length = 171
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ ML + + + + + ++ HTDSIG+ + N+ +S+
Sbjct: 59 IVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQN-NYEVTLEGHTDSIGSNQYNIGLSR 117
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA+ +K+ LI+ G++ R + + +YP+ TN+T GR N+R+E ++ R
Sbjct: 118 RRAEAVKAKLIEFGLAEERIVGIEAKGEEYPVATNETPEGRLQNRRVEFRLVQR 171
>gi|284051859|ref|ZP_06382069.1| OmpA/MotB [Arthrospira platensis str. Paraca]
Length = 285
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
SR G+ + +P + F L +L + L + V+ + HTD G+ +
Sbjct: 165 SRSGNGLIMTLPSDILFNPGSSTLRPGANVILDNLIPDLQNYRGAVVRVAGHTDDSGSRQ 224
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
NL++S +A+ I YL G+ P N + + RQ N+RIE+ I P
Sbjct: 225 QNLVLSSAQAEAIVQYLSNAVDYQAYHWVAIGYGMTRPALENTSDINRQLNRRIEVAITP 284
>gi|229528510|ref|ZP_04417901.1| protein F-related protein [Vibrio cholerae 12129(1)]
gi|229334872|gb|EEO00358.1| protein F-related protein [Vibrio cholerae 12129(1)]
Length = 204
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 76/203 (37%), Gaps = 24/203 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREK-------------------KKVFLHKSNDTDIVNKR 42
+K + + ++GCG ++ + +T ++
Sbjct: 1 MK--FWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWGYAPQKNTSVMPNA 58
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIA 100
+ ++ + L GI + GD + V + L +A
Sbjct: 59 MTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVA 118
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L I ++ HTD+ G+ K N +++ RA+ +K+ L+Q V N I RGF
Sbjct: 119 RFLATESGIDIVLEGHTDNTGSEKLNDKLAERRANAVKAALVQSRVVQN-AIYTRGFGEN 177
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P TN TK GR N+R+EI+
Sbjct: 178 VPACTNSTKNGRACNRRVEIRFI 200
>gi|312142545|ref|YP_003993991.1| OmpA/MotB domain protein [Halanaerobium sp. 'sapolanicus']
gi|311903196|gb|ADQ13637.1| OmpA/MotB domain protein [Halanaerobium sp. 'sapolanicus']
Length = 352
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 7/152 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLE 89
+ LD E +++ + V + D ++ + +
Sbjct: 200 AMAPSTGAKAKIQLDVVE---LAPMEEGLVSVENMEDDLSRTGKAAIYGINFEFDSSQIL 256
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+L IA +L + P + + HTD +G+L+ N +S+ RA+ + +LI ++
Sbjct: 257 ADSHDVLAEIAKLLLENPELRLYVVGHTDDLGSLQYNRNLSERRAESVVDFLIDNHDIAS 316
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ G P TN T+ GR N+R+ +
Sbjct: 317 DRLISAGVGPLAPESTNKTESGRALNRRVVLV 348
>gi|78358672|ref|YP_390121.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78221077|gb|ABB40426.1| peptidoglycan-associated lipoprotein, putative [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 177
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 56/167 (33%), Gaps = 12/167 (7%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + T+ V SS + + G+++
Sbjct: 22 GCAKKQV----AATPEKAATETVVVSEDSSSSSSAMSEEALAAYEKAKAVVTGNVV---- 73
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + +L+ A L +P + I+ + D GT + NL + + RA
Sbjct: 74 ---YFEFDKFDLKAEGKELLKGKAEALKAYPQLRVLIEGNCDERGTQEYNLALGERRARA 130
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
YL+ + + + + P + + + N+R E ++
Sbjct: 131 AFEYLVLL-GVRPDQLEIVSYGEERPAVSGNNEAAWAKNRRAEFKLI 176
>gi|54293640|ref|YP_126055.1| hypothetical protein lpl0693 [Legionella pneumophila str. Lens]
gi|54296680|ref|YP_123049.1| hypothetical protein lpp0711 [Legionella pneumophila str. Paris]
gi|296106245|ref|YP_003617945.1| hypothetical protein lpa_01027 [Legionella pneumophila 2300/99
Alcoy]
gi|53750465|emb|CAH11859.1| hypothetical protein lpp0711 [Legionella pneumophila str. Paris]
gi|53753472|emb|CAH14927.1| hypothetical protein lpl0693 [Legionella pneumophila str. Lens]
gi|295648146|gb|ADG23993.1| hypothetical protein lpa_01027 [Legionella pneumophila 2300/99
Alcoy]
Length = 230
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 58/177 (32%), Gaps = 8/177 (4%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
G+ SG L + V D + +
Sbjct: 45 TGIGAVAGVIASGTAS-------GTLIGAAAGGTVGLVASIYRDSKRKIIRDLQKQDIQY 97
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V S L + P L + +LN +P + I + TD++G+
Sbjct: 98 VEYGDTRTLIIPTDKYFMFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSRS 157
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +SQ +A+ + ++L + + + G+ K I N G N+RIEIQ
Sbjct: 158 HKRKLSQAQAETMMTFLWAN-GIAAKRLKAEGYGDKNAISDNAIIHGSAQNRRIEIQ 213
>gi|260220860|emb|CBA28849.1| Outer membrane protein A [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 203
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ + L + + + VI HTD+ G N +S R++ +
Sbjct: 94 DAFFDFDKSVLKAEGKAKLDDLVSKVKAINLEVIIAVGHTDATGDDSYNQKLSVARSEAV 153
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+YL+ + + G K P+ N TK GR N+R+EI++
Sbjct: 154 KAYLVSK-GIEKNRVYTEGKGEKQPVADNKTKEGRAKNRRVEIEVV 198
>gi|325982116|ref|YP_004294518.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
gi|325531635|gb|ADZ26356.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
Length = 237
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 5/141 (3%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
D+ ++ DT + I I + + ++ + ++
Sbjct: 93 DENPPAATEEIIDTVPPLDVIDRPRILAIFDGKTFRSGQDIIHDVSHSVIDNLIKEISAS 152
Query: 107 PSTVIAIQSHTDSIG---TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
P++ I I+ HTD+I +N+ +S+ RA I + LI IS+ G+ K PI
Sbjct: 153 PNSRILIEGHTDNIPTGKISSDNMDLSRRRARAIANVLIL-HGVPATRISIIGYGDKRPI 211
Query: 164 DTNDTKVGRQNNQRIEIQIFP 184
+N T GR N+R+E+++ P
Sbjct: 212 VSNATDEGRAKNRRVEVKLMP 232
>gi|296271644|ref|YP_003654275.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM
7299]
gi|296095819|gb|ADG91769.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299]
Length = 271
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 1/120 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
++ + + +++ IA IL PS I I HTD+ G
Sbjct: 153 TQDEINAVISKDHIFFKRLGTDITDESYKVVEQIAKILKNNPSVKIEIGGHTDAKGEADV 212
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N IS +RA +K +++ + I+ G+ P+ ND N+R+E +I
Sbjct: 213 NQWISLQRAKSVKKE-LEKLGIAEDRITAVGYGESQPLVPNDKNGYSSENRRVEFKIIEE 271
>gi|317049504|ref|YP_004117152.1| OmpA/MotB domain-containing protein [Pantoea sp. At-9b]
gi|316951121|gb|ADU70596.1| OmpA/MotB domain protein [Pantoea sp. At-9b]
Length = 157
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 27/182 (14%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + + GC D+ + +
Sbjct: 1 MKIKAFLLLCIIACVGCQSKRT----------------------FTDEQIAAMRQE---- 34
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G + G + + ++E L + + +AT L + I HTD+ G
Sbjct: 35 GFSPNAEGWGLGMS-DKILFGINESELTPESKTTINRMATNLAATGIEHLRIDGHTDNYG 93
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
T N +S +RA+ + + + I RG KYP+ +N++ GR N+R+ +
Sbjct: 94 TDSYNEQLSLKRANAVAAQWAEGASLPRSNIETRGLGKKYPVTSNNSAQGRAQNRRVAVV 153
Query: 182 IF 183
I
Sbjct: 154 IT 155
>gi|221134413|ref|ZP_03560718.1| peptidoglycan-associated lipoprotein [Glaciecola sp. HTCC2999]
Length = 188
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 71/183 (38%), Gaps = 6/183 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREK---KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
++ L +++ +MT ++ C E + + ++ ++ E +L
Sbjct: 7 LRSLLIAVPVMTLMA-CSSGPSEAELAAERNRVAAEQAAAQQAAEQANQEQVRLEAAQRL 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q + + D + + ++ F +L A L K I I+ HTD
Sbjct: 66 QQAQEIAEQERDELM-SMQTVYFDFDRATIKADFYNVLDKHAAFLVKNMDQTIVIEGHTD 124
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S GT + N+ + + RA +++Y + S ISV F + P T ++ ++R
Sbjct: 125 SRGTPEYNIALGERRAQAVETYFL-NAGVSASQISVVSFGEEKPAVTGTSEYAFAQSRRA 183
Query: 179 EIQ 181
+
Sbjct: 184 VVV 186
>gi|146300030|ref|YP_001194621.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146154448|gb|ABQ05302.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 712
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 6/137 (4%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
++E ++ + V R D + + ++ K+ +L + ++ K+P V
Sbjct: 574 KNEKVKEILEKEKDVIRDKDRLIIKTDPIYFDYNLWYIRKESKVVLGRVVELMKKYPGMV 633
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-- 168
I I SHTDS G K N +SQ+RA+ I + + IS +G+ PI T
Sbjct: 634 IEIGSHTDSRGNEKFNADLSQKRANS-TREFIIQSGIEAKRISAKGYGESVPIIKCKTDD 692
Query: 169 ---KVGRQNNQRIEIQI 182
+ + N+R E I
Sbjct: 693 ACSEEEHELNRRSEFVI 709
>gi|294651148|ref|ZP_06728483.1| OmpA/MotB domain protein [Acinetobacter haemolyticus ATCC 19194]
gi|292822980|gb|EFF81848.1| OmpA/MotB domain protein [Acinetobacter haemolyticus ATCC 19194]
Length = 255
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ + + L + ++ + D I L + +L +A LNK
Sbjct: 128 RFNAQLSVNLAEQKVIDDALKDRIIE------FESGSAILTETGKRILDEMAVALNKVGG 181
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ I HTDS G N+++S+ERA ++ YL+ + ++++R +S G PI N T
Sbjct: 182 KQVKIIGHTDSSGDASRNVILSKERAVAVQDYLVSKNIATDR-LSTEGKGSSEPIADNAT 240
Query: 169 KVGRQNNQRIEIQIF 183
GR+ N+RIE ++
Sbjct: 241 ADGRRKNRRIEFEVL 255
>gi|94499177|ref|ZP_01305715.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Oceanobacter sp. RED65]
gi|94428809|gb|EAT13781.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Oceanobacter sp. RED65]
Length = 294
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
L+K+ L LIA + P I I H+D++G NN +S++
Sbjct: 173 VSRSKVFFPGGGAALDKQARKKLDLIALYVKADPEVQAIYIDGHSDALGRRYNNRRLSED 232
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + YLI+R I+ R +YP+ +N T GR N+R+ I++
Sbjct: 233 RALKVNEYLIER-GLDAEIITTRYHGERYPVASNATAAGRAQNRRVTIRL 281
>gi|15639711|ref|NP_219161.1| flagellar motor protein MotB [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025949|ref|YP_001933721.1| flagellar motor protein MotB [Treponema pallidum subsp. pallidum
SS14]
gi|3024159|sp|O07887|MOTB_TREPA RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
MotB
gi|2196896|gb|AAB61254.1| MotB [Treponema pallidum]
gi|3323025|gb|AAC65689.1| flagellar motor rotation protein (motB) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018524|gb|ACD71142.1| flagellar motor rotation protein [Treponema pallidum subsp.
pallidum SS14]
gi|291060088|gb|ADD72823.1| chemotaxis protein MotB [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 238
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 66/176 (37%), Gaps = 9/176 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ R + + ++ ++L KA F +++ I V+ + +
Sbjct: 62 ASSGRLADLGNTVNTLPSLEKGQKLATALKKAVSLFAPEIKSNKIAVTSDERGLVISLTS 121
Query: 79 HVSFV-SEVFLE-KKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKN----NLLIS 130
F L ++ L +A L+ I+ HTDS+ ++ N +S
Sbjct: 122 DSFFYPGSSDLNVEESREALLRVAQFLSDHALAGRRFRIEGHTDSVEVPEDGSTDNWELS 181
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
RA + + + + S+ G+A +N++ GR N+R++I I G
Sbjct: 182 TRRAVRVL-HYLTDFGAQENRFSLAGYADTRAKFSNESPEGRAYNRRVDIVILDEG 236
>gi|146306310|ref|YP_001186775.1| OmpA domain-containing protein [Pseudomonas mendocina ymp]
gi|330502226|ref|YP_004379095.1| OmpA domain-containing protein [Pseudomonas mendocina NK-01]
gi|145574511|gb|ABP84043.1| OmpA domain protein [Pseudomonas mendocina ymp]
gi|328916512|gb|AEB57343.1| OmpA domain-containing protein [Pseudomonas mendocina NK-01]
Length = 166
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 21/165 (12%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + N N E + I
Sbjct: 22 GCSSKGGDAAGEGAVDPNAGYGANTGAVDGSLSEEAALRA-------------------I 62
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + ++ H D GT + N+ + + RA
Sbjct: 63 TTFYFEYDSSDLKAEAMRALDVHAKDLKGN-GARVVLEGHADERGTREYNMALGERRAKA 121
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+ + S + + + + P+ T + + N+R+E++
Sbjct: 122 VQRYLVLQ-GVSPAQLELVSYGEERPVATGNDEQSWAQNRRVELR 165
>gi|150397824|ref|YP_001328291.1| peptidoglycan-associated lipoprotein [Sinorhizobium medicae WSM419]
gi|150029339|gb|ABR61456.1| Peptidoglycan-associated lipoprotein [Sinorhizobium medicae WSM419]
Length = 176
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 55/174 (31%), Gaps = 28/174 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++ + ++GC
Sbjct: 20 IMIALVMTLALAGCASKKNLPNDAAGLGLGAGAATPGSQQD------------------- 60
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
T + + F ++ + L A L K+P+ + I+ H D GT
Sbjct: 61 -------FTVNVGDRIFFDTDSTSIRADAQTTLDRQAQWLAKYPNYAVTIEGHADERGTR 113
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NL + RA + YL+ RGV NR ++ + + P+ D N+R
Sbjct: 114 EYNLALGARRAAATRDYLVSRGVPGNRMRTIS-YGKEKPVAVCDDISCWSQNRR 166
>gi|331011090|gb|EGH91146.1| flagellar motor protein MotD [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 295
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K + + + D F ++ + V I + + FVS
Sbjct: 84 KDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSLLFVSG 143
Query: 86 VFLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ +++ ++ I+ +F I ++ TD N +S R+ I
Sbjct: 144 DAIPSDKAFTIIEKVSGIVKRF-DNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVRM 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV+ R SV G+ PI N T GR N+R+ + I ++++
Sbjct: 203 LAMDGVNPARLASV-GYGEFQPIAPNTTAAGRAKNRRVVLVISRNLDVRR 251
>gi|319900153|ref|YP_004159881.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
gi|319415184|gb|ADV42295.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
Length = 419
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
V + ++ + + + I ++ + P+ +++ HTDS G +N +S+ R+ I
Sbjct: 318 FDVGKSVIKPESMGEINRIVQLMTENPTLKFSVEGHTDSTGNATSNQTLSEARSKSIVDK 377
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L++ + ++ G PI N T GR N+R+E
Sbjct: 378 LVE-MGIAADRLTSSGKGQTTPIADNATDEGRAKNRRVEFV 417
>gi|294783516|ref|ZP_06748840.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA]
gi|294480394|gb|EFG28171.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA]
Length = 102
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ ++ ++ ML + + + + + I+ HTDS+G+ + N+ +S+ RA+ +K+ LI
Sbjct: 1 FDKSVVKPQYFEMLNNLKDFIEQN-NYELTIEGHTDSVGSNQYNIGLSRRRAEAVKAKLI 59
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ G+ +R + + +YP+ TN+T GR N+R+E ++ R
Sbjct: 60 EFGLPEDRIVGIEAKGEEYPVATNETPEGRLQNRRVEFRLVQR 102
>gi|294678506|ref|YP_003579121.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
1003]
gi|294477326|gb|ADE86714.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
Length = 422
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 16/179 (8%)
Query: 21 ASREKKKVFLHKSN--DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
A+ +K++ L + + K + L D V +GD
Sbjct: 246 AAEQKRRAALEEEARRKAEAEAKDLARYRSEFFGRMSQ-LLDGRAGVRVVGDRFVFS-SE 303
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDS-----IGTLKNN 126
+ L + + +A + ++ + TD G K+N
Sbjct: 304 VLFQPGSADLSPEGQAQISRVAETFRELAAEIPPEIDWLLEVDGFTDDTPLSGQGEFKDN 363
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+SQ RA + YLI+ + + ++ GF P+ + R N+RIE+++ R
Sbjct: 364 WELSQARALSVVKYLIEAQGFAPKRLAAAGFGEFRPVAAGKSPEARAQNRRIELKLTER 422
>gi|330502789|ref|YP_004379658.1| flagellar motor protein MotD [Pseudomonas mendocina NK-01]
gi|328917075|gb|AEB57906.1| flagellar motor protein MotD [Pseudomonas mendocina NK-01]
Length = 269
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 65/171 (38%), Gaps = 7/171 (4%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
+ + S D + S + F +Q + V I + + F S
Sbjct: 74 RTSEPDNTSMDDPSSDSTLQSIASSVREAFGDLIQSDQLTVRGNEMWIEIELSSSLLFPS 133
Query: 85 EVFL-EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKS 139
+ + +++ +A IL + + + ++ TD++ N +S RA I
Sbjct: 134 GDAIPNNQAFDIIEKVAKILAPYQN-PVKVEGFTDNLPIQTAQYPTNWELSTARASSIVR 192
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV +R ++ G+ P+ N T GR N+R+ + I + ++
Sbjct: 193 MLAMDGVDPSR-LAAVGYGEFQPVADNATAEGRGRNRRVVLVISRNLDTRR 242
>gi|256830500|ref|YP_003159228.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256579676|gb|ACU90812.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 242
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 2/136 (1%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
+ + + + + + I + + F V E L + +L A L
Sbjct: 100 EVLPEGMARSTLNENLQILVRPEGIALVLSDGMLFGVGESALTEDSRKLLSEFAQFLASV 159
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ + + +TD+I + + + + + R SV + +P+ N
Sbjct: 160 -TMPVNVAGYTDNIPAGQKDNYMLSSERAMSVLTFFLQQGFDPRRFSVSAYGEAFPLGDN 218
Query: 167 DTKVGRQNNQRIEIQI 182
T GR N+R+EI +
Sbjct: 219 ATPEGRAKNRRVEILL 234
>gi|89899949|ref|YP_522420.1| OmpA/MotB [Rhodoferax ferrireducens T118]
gi|89344686|gb|ABD68889.1| OmpA/MotB [Rhodoferax ferrireducens T118]
Length = 181
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 58/185 (31%), Gaps = 12/185 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ K L L++ + T ++ C + S K+
Sbjct: 9 LFKNLTLAVMLAT-LAACSTTKVAEAPPVPVAVKAPTAPVAPPAQSTVKSVIAISPL--- 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ LP+++ A L S + ++ + D
Sbjct: 65 -------DDANSPLAKRSVFFGFDNFQIRSSDLPLIEAHAKYLAANKSAKVRLEGNADER 117
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + NL + Q+RA+ ++ L + + F + P+D + N+R+++
Sbjct: 118 GGREYNLALGQKRAEAVRRSLRLL-GVPDSSLEAVSFGMEKPVDAGHNEDAWAKNRRVDL 176
Query: 181 QIFPR 185
+ R
Sbjct: 177 KYIAR 181
>gi|153837358|ref|ZP_01990025.1| putative protein F-related protein [Vibrio parahaemolyticus AQ3810]
gi|308094490|ref|ZP_05889709.2| OmpA family protein [Vibrio parahaemolyticus AN-5034]
gi|149749273|gb|EDM60052.1| putative protein F-related protein [Vibrio parahaemolyticus AQ3810]
gi|308090642|gb|EFO40337.1| OmpA family protein [Vibrio parahaemolyticus AN-5034]
Length = 225
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 62/208 (29%), Gaps = 29/208 (13%)
Query: 2 IKELGLSMFIMTTISGCGL-------------ASREKKKVFLHKSNDTDIVNKRFGSSLD 48
+K + + +SGC + + H + +
Sbjct: 18 MKHWFFIVCGI--LSGCSSLNPDMVPGGNMLDTAPKTNTELRHPEWGYASASHVSTAPRV 75
Query: 49 KAEDEFQMQLQDTGIVVS------------RIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
+ + + G + + V F L
Sbjct: 76 NQTARAAEKKSNNVTSLEMFLDRHNIPHETIGGGHLMIRLKEQVHFQTGSAQLSSNSQDW 135
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L+ + L + I H DS G N +S++RA ++ ++ + R S R
Sbjct: 136 LRKLGHYLAGRTDVDVVIDGHADSTGAASFNDTLSEKRAREVEKQMLASSIPRQRVFS-R 194
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
GF P +N T G+ N+R+E+ +
Sbjct: 195 GFGEYVPQCSNATSSGKACNRRVELMLI 222
>gi|126090250|ref|YP_001041705.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|125999881|gb|ABN63950.1| OmpA/MotB domain protein [Shewanella baltica OS155]
Length = 333
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 63 IVVSRIGDMITCYIP--VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI--QSHTD 118
++V +T + L F+ L + +LN +P +A+ H D
Sbjct: 199 VIVETSPQTLTFSSKSMNVIWGFDATKLSHDFIEQLAEVVEVLNTYPQARVAVLAVGHAD 258
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
SIG+ N +S++RA + + L++ S I V+G +P+ N T GR N+R+
Sbjct: 259 SIGSEAYNQALSEKRAQTVANKLLEL-GVSPAQIEVQGEGESHPVANNQTADGRAKNRRV 317
Query: 179 EIQI 182
E+ I
Sbjct: 318 EVSI 321
>gi|262373433|ref|ZP_06066711.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205]
gi|262311186|gb|EEY92272.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205]
Length = 159
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 28/181 (15%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ + T++GC + L+ G
Sbjct: 7 KISFIALLCLTLAGCLS--------------------------FGPLKYRQVKMLKKEGF 40
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V++ G + + ++ ++ + + +A LNK+ + I HTD IG
Sbjct: 41 VLTEEGWSLGLP-ERLLFDFNKSDIKPENGKEIIRLAKQLNKYDLQKLKIVGHTDDIGNP 99
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N +S+ERA + + ++V G P N + R +N+R+ I I
Sbjct: 100 EYNQKLSEERAQSVAGIFL-NEGFKQTNLNVIGRGSNQPFVPNTSDENRASNRRVAIIII 158
Query: 184 P 184
P
Sbjct: 159 P 159
>gi|311031291|ref|ZP_07709381.1| flagellar motor protein MotS [Bacillus sp. m3-13]
Length = 254
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 58/168 (34%), Gaps = 6/168 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
S ++ T L + + + +V +R I +
Sbjct: 78 TESTNNQEDVAENEEQTQENEDSLQELLVEVQTFLAENDLEDVVVANRTERGIVLVLEEK 137
Query: 80 VSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERA 134
V + + E + P L + T+L K P+ + ++ HTD+ N +S RA
Sbjct: 138 VLYETAEARILPIAHPFLDKVGTLLTKIPNL-VKVEGHTDNRPISTEKFPSNWELSAARA 196
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL+ G+ PI N + Q N+R+EI I
Sbjct: 197 SSVIRYLVDAHDLDPERFIAVGYGDTRPIVENTSNANYQKNRRVEIVI 244
>gi|209808859|ref|YP_002264397.1| outer membrane protein OmpA family [Aliivibrio salmonicida LFI1238]
gi|208010421|emb|CAQ80772.1| outer membrane protein OmpA family [Aliivibrio salmonicida LFI1238]
Length = 201
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 15/196 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDT--DIVNKRFGSSLDKAEDEFQMQL 58
M K + ++ ++ C ++ + D N ++ D +
Sbjct: 1 MKKLIYPTLITSLFLTACVSGDKDYIETPAPSQIADLRDNDNDGVINARDICPGTPR--- 57
Query: 59 QDTGIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
G + G + + + F ++ +A L ++P T I +
Sbjct: 58 ---GAQIDNDGCAEYVEQSDKKDLKILFANNSSEISPIFKSEIRTMAEFLAEYPETSIQL 114
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
Q G + N+ +S+ RA + + + I GF D+ V
Sbjct: 115 QGFASQQGNAEYNIRLSELRASAV-RVALINYGVNPDKIETIGFGDTLLTAKGDSAVSHA 173
Query: 174 NNQRIEIQIFP-RGNI 188
N+R+ + +G++
Sbjct: 174 LNRRVVATVVGFKGDV 189
>gi|311746921|ref|ZP_07720706.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1]
gi|126578612|gb|EAZ82776.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1]
Length = 562
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 2/144 (1%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE-KKFLPMLQLI 99
K G + + L T ++++++ + LE ++ +L +
Sbjct: 419 KSAGFFPKELTLKDINPLDKTVVLMTKLESGSVLLLENVNFKRGTAELEGEETEAVLSEL 478
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A L++ S + I HTD G N +S +RA ++ YL+ + + + G+
Sbjct: 479 AEFLSENSSVKLRINGHTDGGGDPSLNKGLSLDRARSVRDYLVD-HGVTFENLRIAGWGG 537
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF 183
PI +N T+ GR N+R+E+++
Sbjct: 538 TRPIASNATESGRSKNRRVELEVI 561
>gi|91792753|ref|YP_562404.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91714755|gb|ABE54681.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 178
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 51/174 (29%), Gaps = 8/174 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L M + C S + N + G A Q
Sbjct: 8 KAMLVAVPMLALGACSSTS-DSDTDANGSMNGSGSEYGIDGVQTGGAGAVLSPAEQQRLK 66
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
I L+ +L L + PS + I+ H D GT
Sbjct: 67 EQELRRQNII------YFDFDRSDLQSDNADILNAHGNYLVENPSVRVLIEGHADERGTP 120
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N+ + + RA I +Q +S+ + + P+D + G N+R
Sbjct: 121 EYNIALGERRAKAIAK-YLQGMGVQASQMSIVSYGEEKPLDFSRDDSGFAKNRR 173
>gi|254251106|ref|ZP_04944424.1| Outer membrane protein [Burkholderia dolosa AUO158]
gi|124893715|gb|EAY67595.1| Outer membrane protein [Burkholderia dolosa AUO158]
Length = 557
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 80 VSFVSEVFLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L + ++ + P + I+ H DS G+ N +S+ RA I+
Sbjct: 447 LFARGKATFSAARARRELAHVLRLILQNPDHRVLIEGHADSEGSPDANFRLSEARARAIR 506
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+L+ G I+++G PI N T+ GR N+R+++ + P
Sbjct: 507 DWLVVEGGLPITRIAIQGMGDLRPIGDNATEAGRALNRRVDVSLIP 552
>gi|121585594|ref|ZP_01675390.1| protein F-related protein [Vibrio cholerae 2740-80]
gi|229506176|ref|ZP_04395685.1| protein F-related protein [Vibrio cholerae BX 330286]
gi|229509966|ref|ZP_04399446.1| protein F-related protein [Vibrio cholerae B33]
gi|229516473|ref|ZP_04405920.1| protein F-related protein [Vibrio cholerae RC9]
gi|229605715|ref|YP_002876419.1| protein F-related protein [Vibrio cholerae MJ-1236]
gi|255746568|ref|ZP_05420515.1| protein F-related protein [Vibrio cholera CIRS 101]
gi|262158841|ref|ZP_06029954.1| protein F-related protein [Vibrio cholerae INDRE 91/1]
gi|121550211|gb|EAX60225.1| protein F-related protein [Vibrio cholerae 2740-80]
gi|229346354|gb|EEO11325.1| protein F-related protein [Vibrio cholerae RC9]
gi|229352411|gb|EEO17351.1| protein F-related protein [Vibrio cholerae B33]
gi|229356527|gb|EEO21445.1| protein F-related protein [Vibrio cholerae BX 330286]
gi|229372201|gb|ACQ62623.1| protein F-related protein [Vibrio cholerae MJ-1236]
gi|255736322|gb|EET91720.1| protein F-related protein [Vibrio cholera CIRS 101]
gi|262029414|gb|EEY48065.1| protein F-related protein [Vibrio cholerae INDRE 91/1]
Length = 204
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 72/203 (35%), Gaps = 24/203 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREK-------------------KKVFLHKSNDTDIVNKR 42
+K + + ++GCG ++ + +T ++
Sbjct: 1 MK--FWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWGYAPQKNTSVMPNA 58
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIA 100
+ ++ + L GI + GD + V + L +A
Sbjct: 59 MTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVA 118
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L I ++ HTD+ G+ K N +++ RA+ + + + + I RGF
Sbjct: 119 RFLATESGIDIVLEGHTDNTGSEKLNDKLAERRANAV-KAALVQSRVAQNAIYTRGFGEN 177
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P TN TK GR N+R+EI+
Sbjct: 178 VPACTNSTKNGRACNRRVEIRFI 200
>gi|312129863|ref|YP_003997203.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311906409|gb|ADQ16850.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 300
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 57/141 (40%), Gaps = 5/141 (3%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPS 108
+ + L DT + V ++ + + F + + +L+ +A I+ P
Sbjct: 145 LKSALKDGLDDTDVDVKVDKTVVMVNLSDKMLFTSGSYKISPRAYSVLEKVAAIIKSRPD 204
Query: 109 TVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ ++ +TD++ +++N +S +R+ + L + I G +
Sbjct: 205 LEVMVEGYTDNVSINTACIEDNWDLSVKRSTSVVRTLQSKFGVDPNKIIAAGRGEYNTLT 264
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
+N T GR N+R I + P+
Sbjct: 265 SNSTAEGRAINRRTRIILMPK 285
>gi|254390197|ref|ZP_05005416.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|294814756|ref|ZP_06773399.1| Putative secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|326443135|ref|ZP_08217869.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|197703903|gb|EDY49715.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|294327355|gb|EFG08998.1| Putative secreted protein [Streptomyces clavuligerus ATCC 27064]
Length = 250
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 52/110 (47%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L + + IA + + + + + TD +G+ ++ +S++RAD +
Sbjct: 137 EVLFGRDSHELNPRANSRIAAIAEEIRRNGAKQVRVFGFTDDLGSYRHGRTLSRKRADAV 196
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ L + VRG++ +PI N T+ GR+ N+R+E+ +G+
Sbjct: 197 HAMLDGQVEDHTVSYIVRGYSEDFPIADNSTEEGREKNRRVEVSFPTKGS 246
>gi|163751256|ref|ZP_02158484.1| peptidoglycan-associated lipoprotein [Shewanella benthica KT99]
gi|161328970|gb|EDQ00044.1| peptidoglycan-associated lipoprotein [Shewanella benthica KT99]
Length = 178
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 59/178 (33%), Gaps = 8/178 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + + +S C S E + ++ + G + Q
Sbjct: 8 KAMLVVLPIMALSACSSTS-ESETDATSSTSGSGSELATGGVETGGVAPILTPEEQQRLK 66
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ I + +F +LQ L + P+ + I+ H D GT
Sbjct: 67 YQELRKEHII------YFDFDRSLVSAQFAEVLQAHGNYLVEHPNVRLMIEGHADERGTP 120
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA + +Q +S+ + + P+D + T N+R +
Sbjct: 121 EYNIALGERRAKAVAK-YLQGMGVLPSQMSIVSYGEEKPLDMSRTDDSFAINRRAVLV 177
>gi|87311740|ref|ZP_01093855.1| probable outer membrane protein A (OmpA) [Blastopirellula marina
DSM 3645]
gi|87285524|gb|EAQ77443.1| probable outer membrane protein A (OmpA) [Blastopirellula marina
DSM 3645]
Length = 265
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 68/175 (38%), Gaps = 8/175 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD---TGIVVSRIGDMITCYI 76
++++ ++ ++ G + + Q + +G V GD+I I
Sbjct: 88 TQAQQQIASAKQENTTLLASTRQRGGATITPNNSLQQSVSQIQISGAQVRVDGDLIRIEI 147
Query: 77 P-VHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTDSI---GTLKNNLLISQ 131
P + L + L +A + + FP +I ++ HTD+ + +S
Sbjct: 148 PADQIFMTGTNTLHQNAYGTLDQVANAIRQQFPRNLIGVEGHTDNQAASPPFASQHQLSA 207
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
A L+ RG + V G +P+ +N T G+ N+RI+I I+P
Sbjct: 208 SMAQATFDQLVARGQVPPNRLFVVGHGGNHPVVSNATPAGQARNRRIDIVIYPED 262
>gi|297184220|gb|ADI20338.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [uncultured alpha proteobacterium
EB080_L27A02]
Length = 618
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G++ ++ + + + +K K ++F + + +
Sbjct: 441 GVSGNKEATGKISRILSVRVGSKGIYKISTKYNEKFAPKPKVKSARLCESEINTIISNTK 500
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+V + L +++ IA +L P IQ HTDS G+ + N +SQ RA+ +
Sbjct: 501 IRFEPGKVIINDDNLTVIKSIADVLRTCPEAKFEIQGHTDSSGSEELNQNLSQSRAEAVL 560
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L+ R V ++ IS +G+ PI N T+ GR+ N+RIEI++
Sbjct: 561 FELLNRRVLTS-GISAKGYGSISPIADNKTEEGREINRRIEIKLL 604
>gi|282865311|ref|ZP_06274363.1| OmpA/MotB domain protein [Streptomyces sp. ACTE]
gi|282559784|gb|EFB65334.1| OmpA/MotB domain protein [Streptomyces sp. ACTE]
Length = 213
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 69/193 (35%), Gaps = 14/193 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFL--HKSNDTDIVNKRFGSSLDKAEDE------ 53
+ L++ + G G + S + + S L E
Sbjct: 11 KTRVALTVVVSALAIGGGDIPQAVADDSPYPSASAEPPVEVDANDSDLKLPEGATLAPPK 70
Query: 54 ---FQMQLQDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ ++D G R + L + IA +
Sbjct: 71 VLDIKSVVEDLGGEERREDTNADIKFALQAEVLFGKDSAKLSSDANSRINAIAAEIKNQD 130
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ + + TD++G+ ++ ++S+ERA+ + + L + +RG+ +YPI N
Sbjct: 131 AKKVRVFGFTDNLGSSEHGDVLSKERAEAVHNVLDASLAGTGITFEIRGYGEQYPIADNS 190
Query: 168 TKVGRQNNQRIEI 180
++ GR+ N+R+E+
Sbjct: 191 SEEGRKKNRRVEV 203
>gi|114771339|ref|ZP_01448759.1| OmpA domain protein [alpha proteobacterium HTCC2255]
gi|114548264|gb|EAU51151.1| OmpA domain protein [alpha proteobacterium HTCC2255]
Length = 618
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G++ ++ + + + +K K ++F + + +
Sbjct: 441 GVSGNKEATGKISRILSVRVGSKGIYKISTKYNEKFAPKPKVKSARLCESEINTIISNTK 500
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+V + L +++ IA +L P IQ HTDS G+ + N +SQ RA+ +
Sbjct: 501 IRFEPGKVIINDDNLTVIKSIADVLRTCPEAKFEIQGHTDSSGSEELNQNLSQSRAEAVL 560
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L+ R V ++ IS +G+ PI N T+ GR+ N+RIEI++
Sbjct: 561 FELLNRRVLTS-GISAKGYGSISPIADNKTEEGREINRRIEIKLL 604
>gi|325954396|ref|YP_004238056.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323437014|gb|ADX67478.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 297
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 63/156 (40%), Gaps = 9/156 (5%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPM 95
K D + + GI V I + + F + + ++ +
Sbjct: 133 AQQRKAIAKLKQSISDALRG-FEGKGITVYEKNGQIYVSMENKLLFSTGKWDVRQEGISA 191
Query: 96 LQLIATILNKFPSTVIAIQSHTDS------IGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L ++++L K I I+ HTDS G +++N +S RA + ++Q+
Sbjct: 192 LVQLSSVLKKQNDLNILIEGHTDSVPYGAKQGDVQDNWDLSVMRATAVTK-ILQKDGVRP 250
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ G + PI N T+ G+ N+R+EI I P
Sbjct: 251 TQMTAAGRSKYIPIGDNATESGKAKNRRVEIIITPN 286
>gi|296188354|ref|ZP_06856746.1| putative chemotaxis protein MotB [Clostridium carboxidivorans P7]
gi|296047480|gb|EFG86922.1| putative chemotaxis protein MotB [Clostridium carboxidivorans P7]
Length = 277
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 61/156 (39%), Gaps = 11/156 (7%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
K S ++ + + LQ G + + + + F + +
Sbjct: 81 DGKTEESKMEDLKKKVDSYLQKNGMQNSVTTEVDERGLVVSLRDTLFFETGKAEVIAASQ 140
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSN 149
L I ILN+ +T + I+ HTD++ +N +S RA + LI GV
Sbjct: 141 GKLVEIGKILNQLDNT-MRIEGHTDNVPIHNEQFSDNWQLSSARALNVTELLIANGVPPK 199
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ SV + P+ N T+ GR N+R++I +
Sbjct: 200 KLSSVA-YGEYRPVLDNSTEDGRARNRRVDIIVVSN 234
>gi|229591826|ref|YP_002873945.1| flagellar motor protein MotD [Pseudomonas fluorescens SBW25]
gi|229363692|emb|CAY51066.1| putative chemotaxis protein [Pseudomonas fluorescens SBW25]
Length = 297
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 7/169 (4%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-E 85
+ + S D F + + V + + + F S +
Sbjct: 87 NDSDETAAGVGGTSDPLKSIADDISAAFGDLISSNQMTVRGNELWVEIELNSSLLFASAD 146
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYL 141
+ ++ +A+IL F + I ++ TD+ N +S RA I L
Sbjct: 147 AMPSDQAFTIIDKVASILRPFEN-PIHVEGFTDNFPINTAQYPTNWELSSARAASIVRML 205
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+GV+ R SV G+ P+ N T GR N+R+ + + ++++
Sbjct: 206 AMQGVNPGRLASV-GYGEFQPVANNATVEGRARNRRVVLVVSRNLDVRR 253
>gi|15601417|ref|NP_233048.1| protein F-related protein [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|153211953|ref|ZP_01947800.1| OmpA family protein [Vibrio cholerae 1587]
gi|153800869|ref|ZP_01955455.1| OmpA family protein [Vibrio cholerae MZO-3]
gi|153818096|ref|ZP_01970763.1| OmpA family protein [Vibrio cholerae NCTC 8457]
gi|153824386|ref|ZP_01977053.1| OmpA family protein [Vibrio cholerae MZO-2]
gi|227812226|ref|YP_002812236.1| protein F-related protein [Vibrio cholerae M66-2]
gi|254285685|ref|ZP_04960648.1| OmpA family protein [Vibrio cholerae AM-19226]
gi|254849820|ref|ZP_05239170.1| OmpA family protein [Vibrio cholerae MO10]
gi|298499464|ref|ZP_07009270.1| OmpA family protein [Vibrio cholerae MAK 757]
gi|9658075|gb|AAF96560.1| protein F-related protein [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|124117029|gb|EAY35849.1| OmpA family protein [Vibrio cholerae 1587]
gi|124123579|gb|EAY42322.1| OmpA family protein [Vibrio cholerae MZO-3]
gi|126511364|gb|EAZ73958.1| OmpA family protein [Vibrio cholerae NCTC 8457]
gi|149741940|gb|EDM55969.1| OmpA family protein [Vibrio cholerae MZO-2]
gi|150424182|gb|EDN16120.1| OmpA family protein [Vibrio cholerae AM-19226]
gi|227011368|gb|ACP07579.1| protein F-related protein [Vibrio cholerae M66-2]
gi|254845525|gb|EET23939.1| OmpA family protein [Vibrio cholerae MO10]
gi|297541445|gb|EFH77496.1| OmpA family protein [Vibrio cholerae MAK 757]
Length = 207
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 72/203 (35%), Gaps = 24/203 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREK-------------------KKVFLHKSNDTDIVNKR 42
+K + + ++GCG ++ + +T ++
Sbjct: 4 MK--FWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWGYAPQKNTSVMPNA 61
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIA 100
+ ++ + L GI + GD + V + L +A
Sbjct: 62 MTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVA 121
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L I ++ HTD+ G+ K N +++ RA+ + + + + I RGF
Sbjct: 122 RFLATESGIDIVLEGHTDNTGSEKLNDKLAERRANAV-KAALVQSRVAQNAIYTRGFGEN 180
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P TN TK GR N+R+EI+
Sbjct: 181 VPACTNSTKNGRACNRRVEIRFI 203
>gi|84515818|ref|ZP_01003179.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
gi|84510260|gb|EAQ06716.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
Length = 637
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ P++ IA +L I + +TDS G NL +SQ+RAD + +
Sbjct: 499 FDPGSASITAAAQPVIDDIAEVLRLCGDLRIRVAGYTDSQGREAMNLRLSQDRADAVLTA 558
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L R V + G+ PI N T+ GR+ N+RIE +
Sbjct: 559 LRARRVPVS-TFEAVGYGIADPIADNATEAGREANRRIEFSLI 600
>gi|307729050|ref|YP_003906274.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307583585|gb|ADN56983.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 168
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 32/185 (17%)
Query: 1 MIKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K LG+S + ++GC + L+K+
Sbjct: 1 MKKLLGVSACALSVVLMAGCAAPLNRDTETSLNKAV------------------------ 36
Query: 59 QDTGIVVSRIGDMITCYIPVH-VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
GI V+ + D + +P + ++ + ++ A +L + I ++ +T
Sbjct: 37 ---GIEVAPVTDGVAVKLPEKALFDFNKSDVRSDASGVIDRSAVLLKRSKK-PIIVEGYT 92
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D++GTL+ N +S+ RA + L+ RGV+ +R I +G AY P+ +NDT GR N+R
Sbjct: 93 DNVGTLEYNQQLSEARAVAVGYALVARGVAMDR-IRTKGNAYNNPVASNDTPEGRALNRR 151
Query: 178 IEIQI 182
EI +
Sbjct: 152 TEIVV 156
>gi|221640500|ref|YP_002526762.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
gi|221161281|gb|ACM02261.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
Length = 652
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+++ L +A + + + I HTDS G+ N +SQ
Sbjct: 491 VLAGQKITFEPGSAEIDRSARGTLDGLAEVFKVCKAMPLEISGHTDSQGSEGGNKALSQA 550
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ + L R V R +V G+ + PI N + GR+ N+RIE +
Sbjct: 551 RAEAVLLALQGRRVDVGRMKAV-GYGEERPIADNGNEEGREANRRIEFTLL 600
>gi|124005068|ref|ZP_01689910.1| peptidoglycan-associated cytoplasmic membrane protein, putative
[Microscilla marina ATCC 23134]
gi|123989320|gb|EAY28881.1| peptidoglycan-associated cytoplasmic membrane protein, putative
[Microscilla marina ATCC 23134]
Length = 680
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ +++ L IA L ++ V+ I HTD+IG N L+++ R+ +
Sbjct: 569 QVLFGFDSYQIQPRYISHLDSIANYLKEYTEMVVEISGHTDNIGNRWYNNLLAKRRSQAV 628
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE-IQI 182
+YLI + + +G+A P+ TN T GR N+R++ I I
Sbjct: 629 INYLINKKGIPAAQVVFKGYADSKPLGTNTTVTGRALNRRVDGIVI 674
>gi|327404809|ref|YP_004345647.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320317|gb|AEA44809.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 454
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + L+ + +L+ IAT L++ P+ + I HTDS G N +S++R
Sbjct: 345 LVTKGILFASNSDQLKPESYGVLKEIATALSENPAVRVKIVGHTDSDGEESFNAELSKKR 404
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
A +K LI + G P D+N T VG+ NN+R+E
Sbjct: 405 ALAVKQALISEFKIEASRMETDGKGENEPTDSNATSVGKANNRRVEFL 452
>gi|257484887|ref|ZP_05638928.1| flagellar motor protein MotD [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 295
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K + + + D F ++ + V I + + FVS
Sbjct: 84 KDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSLLFVSG 143
Query: 86 VFLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ +++ ++ I+ +F I ++ TD N +S R+ I
Sbjct: 144 DAIPSDKAFTIIEKVSGIVKRF-DNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVRM 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV+ R SV G+ PI N T GR N+R+ + I ++++
Sbjct: 203 LAMDGVNPARLASV-GYGEFQPIAPNTTAAGRAKNRRVVLVISRNLDVRR 251
>gi|255535532|ref|YP_003095903.1| membrane-bound proton-translocating pyrophosphatase
[Flavobacteriaceae bacterium 3519-10]
gi|255341728|gb|ACU07841.1| Pyrophosphate-energized proton pump [Flavobacteriaceae bacterium
3519-10]
Length = 912
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 2/111 (1%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I L+ L +A I+N P+ I + +TD G NL +S RA
Sbjct: 802 TIENLYFQSGSSDLKPGAENALANLAEIMNDHPNVRIKLGGYTDDTGNADTNLKLSNLRA 861
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQIFP 184
+ + I G+ +P+ NDT + N+RI++++
Sbjct: 862 QT-TKLKLLEMGIAADRIETEGYGPLFPVCEANDTDECKAQNRRIDVRVLS 911
>gi|46579833|ref|YP_010641.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough]
gi|46449248|gb|AAS95900.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough]
Length = 357
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ L+ +L A I+ P + + HT ++GT NL +S
Sbjct: 248 VIVLRNVQFALNSAKLDASATSILTEAARIIKANPGKKLLVAGHTCNLGTDAYNLKLSDA 307
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
RA +K +L+++GV ++R + GF P N T+ GR N+R+E+
Sbjct: 308 RAKSVKDFLVKQGVEASR-LDTFGFGESQPKYDNGTEQGRSMNRRVEL 354
>gi|28900403|ref|NP_800058.1| hypothetical protein VPA0548 [Vibrio parahaemolyticus RIMD 2210633]
gi|308095573|ref|ZP_05906887.2| OmpA family protein [Vibrio parahaemolyticus Peru-466]
gi|308125408|ref|ZP_05775064.2| OmpA family protein [Vibrio parahaemolyticus K5030]
gi|308126617|ref|ZP_05911271.2| OmpA family protein [Vibrio parahaemolyticus AQ4037]
gi|28808714|dbj|BAC61891.1| putative protein F-related protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308085093|gb|EFO34788.1| OmpA family protein [Vibrio parahaemolyticus Peru-466]
gi|308107912|gb|EFO45452.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
gi|308113845|gb|EFO51385.1| OmpA family protein [Vibrio parahaemolyticus K5030]
Length = 208
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 62/208 (29%), Gaps = 29/208 (13%)
Query: 2 IKELGLSMFIMTTISGCGL-------------ASREKKKVFLHKSNDTDIVNKRFGSSLD 48
+K + + +SGC + + H + +
Sbjct: 1 MKHWFFIVCGI--LSGCSSLNPDMVPGGNMLDTAPKTNTELRHPEWGYASASHVSTAPRV 58
Query: 49 KAEDEFQMQLQDTGIVVS------------RIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
+ + + G + + V F L
Sbjct: 59 NQTARAAEKKSNNVTSLEMFLDRHNIPHETIGGGHLMIRLKEQVHFQTGSAQLSSNSQDW 118
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L+ + L + I H DS G N +S++RA ++ ++ + R S R
Sbjct: 119 LRKLGHYLAGRTDVDVVIDGHADSTGAASFNDTLSEKRAREVEKQMLASSIPRQRVFS-R 177
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
GF P +N T G+ N+R+E+ +
Sbjct: 178 GFGEYVPQCSNATSSGKACNRRVELMLI 205
>gi|323529927|ref|YP_004232079.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323386929|gb|ADX59019.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 321
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 61/159 (38%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 161 DGTQIDVKGEVRNESQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 220
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A + K + +AI HTD+ G +N+ +SQ RAD + +
Sbjct: 221 TGSATLTPQGRAILDQMAAAMQKMTTKTVAIIGHTDNSGNRASNIALSQARADAV-KGYL 279
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +S G PI +NDT GR N+RIE +
Sbjct: 280 VAKGVPPQQMSTTGVGPDQPIASNDTADGRARNRRIEFR 318
>gi|221196011|ref|ZP_03569058.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
gi|221202685|ref|ZP_03575704.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221176619|gb|EEE09047.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221182565|gb|EEE14965.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
Length = 484
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 7/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
+ + ++ + V F ++ P++ IA + K P
Sbjct: 347 LKQLLKDEIAAGTVSVDEDARRSVVTFRGDAMFRPGGASVQASMNPLIAKIAAEIAKVPG 406
Query: 109 TVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I +TD++ +N +S+ERA + L + G P+
Sbjct: 407 -KVTIVGYTDNVPIRSRQFASNQALSEERATQVMQMLQAA-GVQANRLEAVGKGDADPVG 464
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T GR N+R+EI +
Sbjct: 465 DNRTAQGRAQNRRVEIDV 482
>gi|163857259|ref|YP_001631557.1| OmpA-family protein [Bordetella petrii DSM 12804]
gi|163260987|emb|CAP43289.1| OmpA-family protein [Bordetella petrii]
Length = 334
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 69/198 (34%), Gaps = 23/198 (11%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE---------------DE 53
+ + LA + + G + E
Sbjct: 129 LAAALPVPATALAPAGDSPAAPAANLRQTSDDAAGGEPPSAPKIEPEPEPTQPEPPSIAE 188
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ G+ V I+ I + F + L L ++ +A ++N+ ++
Sbjct: 189 LGLDDLGDGVDVIVNEKSISFRISNELLFPSGQAVLSPAGLGLISRMAKVINRSQGYPVS 248
Query: 113 IQSHTDSIGTLKNN----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++ H+D + +S RA + L++ GV R + G+A +PI +NDT
Sbjct: 249 VEGHSDPVPIQTRQFPSNWELSAGRATSVLRELVRDGVDPGR-LRAVGYADTHPIASNDT 307
Query: 169 KVGRQNNQRIEIQ--IFP 184
GR N+R+E+ I P
Sbjct: 308 PQGRAANRRVELIMEITP 325
>gi|332673924|gb|AEE70741.1| peptidoglycan associated lipoprotein [Helicobacter pylori 83]
Length = 179
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 61/184 (33%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + + I+GC ++ + + +K E + +
Sbjct: 1 MKRSSVFGFLVAFLFIAGCKHNMDKETVAGDVSAKAVQSAPVSTETVQEKQEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCTQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|197119091|ref|YP_002139518.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
gi|197088451|gb|ACH39722.1| OmpA family outer membrane protein, DUF11 domain-containing protein
[Geobacter bemidjiensis Bem]
Length = 2000
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ + + L + +L+ A +L P + ++ HTD IG+++ N
Sbjct: 1717 NRREAVLLTLSGGAFVFDRSELTLEAKHLLKGAARVLRARPQEKVIVEGHTDGIGSVEYN 1776
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ +SQ R D YL++ + + R + P+ N T GR+ N+R+E+ +G
Sbjct: 1777 MALSQRRCDAAADYLVREEGIAGSRLLRRWYGKSRPVADNVTTPGRRLNRRVEL----KG 1832
Query: 187 NIKK 190
+ K+
Sbjct: 1833 DFKE 1836
>gi|91217489|ref|ZP_01254448.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
700755]
gi|91184374|gb|EAS70758.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
700755]
Length = 280
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 5/133 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ D I ++ ++ I + F + + + +L +AT++N ++ H
Sbjct: 132 INDEDIQINVEKGVVFVSISDKLLFGAGQFKVTAEAKRVLGKVATVVNDKKDFEFMVEGH 191
Query: 117 TDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD+ ++N +S +RA + L + ++ G P+ NDT+ G+
Sbjct: 192 TDNDPISRTNIEDNWDLSTKRATAVVRILQDEYDVDPKRMTAAGRGEYIPVANNDTEAGQ 251
Query: 173 QNNQRIEIQIFPR 185
N+R I I P+
Sbjct: 252 SKNRRTRIVILPK 264
>gi|71737581|ref|YP_275515.1| flagellar motor protein MotD [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558134|gb|AAZ37345.1| chemotaxis protein MotB [Pseudomonas syringae pv. phaseolicola
1448A]
gi|283133060|dbj|BAI63827.1| flagellar motor protein MotD [Pseudomonas syringae pv. tabaci]
gi|320325140|gb|EFW81209.1| flagellar motor protein MotD [Pseudomonas syringae pv. glycinea
str. B076]
gi|320329399|gb|EFW85392.1| flagellar motor protein MotD [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330889033|gb|EGH21694.1| flagellar motor protein MotD [Pseudomonas syringae pv. mori str.
301020]
gi|330986516|gb|EGH84619.1| flagellar motor protein MotD [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 295
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K + + + D F ++ + V I + + FVS
Sbjct: 84 KDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSLLFVSG 143
Query: 86 VFLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ +++ ++ I+ +F I ++ TD N +S R+ I
Sbjct: 144 DAIPSDKAFTIIEKVSGIVKRF-DNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVRM 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV+ R SV G+ PI N T GR N+R+ + I ++++
Sbjct: 203 LAMDGVNPARLASV-GYGEFQPIAPNTTAAGRAKNRRVVLVISRNLDVRR 251
>gi|15966491|ref|NP_386844.1| peptidoglycan-associated lipoprotein precursor [Sinorhizobium
meliloti 1021]
gi|307300472|ref|ZP_07580252.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti
BL225C]
gi|307318337|ref|ZP_07597772.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti AK83]
gi|22653891|sp|Q926C3|OMP16_RHIME RecName: Full=Outer membrane lipoprotein omp16 homolog; Flags:
Precursor
gi|15075762|emb|CAC47317.1| Peptidoglycan-associated lipoprotein [Sinorhizobium meliloti 1021]
gi|306896019|gb|EFN26770.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti AK83]
gi|306904638|gb|EFN35222.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti
BL225C]
Length = 176
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 55/174 (31%), Gaps = 28/174 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++ + ++GC
Sbjct: 20 VMIALVMTLALAGCASKKNLPNDAAGLGLGAGAATPGSQQD------------------- 60
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
T + + F ++ + L A L K+P+ I I+ H D GT
Sbjct: 61 -------FTVNVGDRIFFDTDSTSIRADAQATLDRQAQWLAKYPNYGITIEGHADERGTR 113
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NL + RA + YL+ RGV NR ++ + + P+ D N+R
Sbjct: 114 EYNLALGARRAAATRDYLVSRGVPGNRMRTIS-YGKEKPVAVCDDISCWSQNRR 166
>gi|294675945|ref|YP_003576560.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
1003]
gi|294474765|gb|ADE84153.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
Length = 739
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
S ++ + P L +A + + + + HTDS G+ + N +SQ R
Sbjct: 491 LARDKIGFEPSSATIKPEDGPKLDALAKAMAQCQDFRMEVAGHTDSQGSDEGNRKLSQAR 550
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A+ + + R ++ +G+ PI NDT GR+ +RIE +
Sbjct: 551 AEAVI-TALSARRVLTRNLTPKGYGESQPIAENDTDKGREATRRIEFVLL 599
>gi|116621983|ref|YP_824139.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116225145|gb|ABJ83854.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 199
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 57/191 (29%), Gaps = 11/191 (5%)
Query: 1 MIKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+ + ++ +T + +GC R E
Sbjct: 4 IRRRTLIAFAAITLLSAGCAKKKVTAATPPAPAPATASTPAPRATPPPAAVERAAAPTAS 63
Query: 60 DT-----GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ----LIATILNKFPSTV 110
D + I + L + L + IL +P
Sbjct: 64 TPTSRYPDAPTRARIDQLLAKIEDAYFDYDKASLRPDAMKALNADSTELRDILKDYPDYK 123
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ I+ H D G+ + N+ + RA K YL+ + + + V F + P+ + +
Sbjct: 124 LRIEGHADERGSAEYNVALGDRRAATAKEYLV-QVGIPSTQLDVTSFGKERPVCQDHNEN 182
Query: 171 GRQNNQRIEIQ 181
Q N+RI I
Sbjct: 183 CWQKNRRIHIV 193
>gi|329113829|ref|ZP_08242600.1| Outer membrane lipoprotein Omp16 [Acetobacter pomorum DM001]
gi|326696839|gb|EGE48509.1| Outer membrane lipoprotein Omp16 [Acetobacter pomorum DM001]
Length = 160
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 63/176 (35%), Gaps = 23/176 (13%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ ++ ++ +S C + + I GS D
Sbjct: 1 MRLKVVAALGMVALLSACAHDNANTGASNGAATTQPTISGPVPGSEAD------------ 48
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+V+ +GD + +++ L LQ A L K+P + + + D
Sbjct: 49 ---LVANVGDRV-------FYDLNKSGLRDDAKDTLQKQADWLAKYPQVNVEVAGNCDDR 98
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
GT + N+ + Q RA+ + YL+ + ++ IS + P D + N+
Sbjct: 99 GTEEYNIALGQRRANAARDYLVAK-GVASSRISTISYGKDRPTALGDDEDAWAQNR 153
>gi|212693137|ref|ZP_03301265.1| hypothetical protein BACDOR_02644 [Bacteroides dorei DSM 17855]
gi|237709882|ref|ZP_04540363.1| outer membrane protein [Bacteroides sp. 9_1_42FAA]
gi|237725448|ref|ZP_04555929.1| outer membrane protein [Bacteroides sp. D4]
gi|254881970|ref|ZP_05254680.1| outer membrane protein [Bacteroides sp. 4_3_47FAA]
gi|265753535|ref|ZP_06088890.1| outer membrane protein [Bacteroides sp. 3_1_33FAA]
gi|294776453|ref|ZP_06741929.1| OmpA family protein [Bacteroides vulgatus PC510]
gi|319641023|ref|ZP_07995729.1| OmpA family Outer membrane protein [Bacteroides sp. 3_1_40A]
gi|212664242|gb|EEB24814.1| hypothetical protein BACDOR_02644 [Bacteroides dorei DSM 17855]
gi|229436135|gb|EEO46212.1| outer membrane protein [Bacteroides dorei 5_1_36/D4]
gi|229455975|gb|EEO61696.1| outer membrane protein [Bacteroides sp. 9_1_42FAA]
gi|254834763|gb|EET15072.1| outer membrane protein [Bacteroides sp. 4_3_47FAA]
gi|263235249|gb|EEZ20773.1| outer membrane protein [Bacteroides sp. 3_1_33FAA]
gi|294449696|gb|EFG18220.1| OmpA family protein [Bacteroides vulgatus PC510]
gi|317387353|gb|EFV68226.1| OmpA family Outer membrane protein [Bacteroides sp. 3_1_40A]
Length = 243
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 82/224 (36%), Gaps = 44/224 (19%)
Query: 1 MIKELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKR--------------- 42
++K+ + ++ SGCG + K + +
Sbjct: 4 IMKKTKIMALLLSATLVFSGCGNMNNTAKGGLIGGGGGAALGAIIGGIAGHGKGAAIGAA 63
Query: 43 ------------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFV-SEV 86
G +DKA +E Q+Q + + + + F
Sbjct: 64 VGAAVGTGAGVLIGKKMDKAAEE-AAQIQGAQVEQVTDNNGLQAVKVTFDSGILFNTGNA 122
Query: 87 FLEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL--------KNNLLISQERADVI 137
L + L A LN+ ++I +TD+ G + NL +SQERA +
Sbjct: 123 ALSAQAKSALSKFANNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSIQKNLNLSQERAQSV 182
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
SYL+ GVS+++ SV G PI NDT GRQ N+R+E+
Sbjct: 183 ASYLLGCGVSNSQIKSVEGLGQADPIGNNDTAEGRQQNRRVEVY 226
>gi|289627957|ref|ZP_06460911.1| flagellar motor protein MotD [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647094|ref|ZP_06478437.1| flagellar motor protein MotD [Pseudomonas syringae pv. aesculi str.
2250]
gi|298487807|ref|ZP_07005848.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298157899|gb|EFH98978.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330866472|gb|EGH01181.1| flagellar motor protein MotD [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 295
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K + + + D F ++ + V I + + FVS
Sbjct: 84 KDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSLLFVSG 143
Query: 86 VFLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ +++ ++ I+ +F I ++ TD N +S R+ I
Sbjct: 144 DAIPSDKAFTIIEKVSGIVKRF-DNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVRM 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV+ R SV G+ PI N T GR N+R+ + I ++++
Sbjct: 203 LAMDGVNPARLASV-GYGEFQPIAPNTTAAGRAKNRRVVLVISRNLDVRR 251
>gi|188996771|ref|YP_001931022.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931838|gb|ACD66468.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 264
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 11/166 (6%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIPVHVSFV 83
+ V ++ + K ++ + ++ + + V I + I ++ F
Sbjct: 64 SAPTSIIEGVGVKQKREDAKKKIKERVEQIIKKLNLEGKVSVEVIPMGVRIRILDYILFP 123
Query: 84 S-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQERADVI 137
+ +++ +L IA ++ + + ++ HTD I +N +S RA +
Sbjct: 124 PCSTEINQEYKELLNGIAEVIKE-AKLPVEVEGHTDDIPPGPTCIYPSNWELSASRAAAV 182
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
YLI G S G+A PI N++++GR+ N+RIEI +
Sbjct: 183 VRYLITAGNLPPYLFSAVGYADTKPISPNNSELGRKLNRRIEINLI 228
>gi|94268092|ref|ZP_01291083.1| OmpA/MotB [delta proteobacterium MLMS-1]
gi|93451732|gb|EAT02500.1| OmpA/MotB [delta proteobacterium MLMS-1]
Length = 240
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 7/168 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ + + T G++ F G +VS T + +
Sbjct: 68 TTGVSAEPVPPAAVATGHPGSGEGTAQGLLSHYFSD-FARDGFMVSGNVGQFTLTLEEKL 126
Query: 81 SF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERAD 135
+F + LP+L+ +A +L P+ + I H+D + +N +S RA
Sbjct: 127 AFASGRAEPREPSLPILERLAELLAGKPAYRVIIAGHSDDLPISSERYPSNWYLSSARAV 186
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ YL Q+GV R ++ +G A P ND+ R N+R+EI +
Sbjct: 187 AVAEYLQQQGVDPGR-LTTQGHAEFKPRVANDSPQNRAKNRRVEITLL 233
>gi|312130253|ref|YP_003997593.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311906799|gb|ADQ17240.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 657
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T + + + + L + IL P I + SHTD+ + NL +SQ
Sbjct: 540 TFRLENIYYDLDKADIRPDAAIELDKLVQILKDNPGLKIELGSHTDARASEIYNLRLSQR 599
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-TKVGRQNNQRIEIQIF 183
RA+ +Y++ +G+S R + RG+ I N T+ Q N+R E ++
Sbjct: 600 RAESAINYIVNKGISRER-LEARGYGESELIIPNAKTEAEHQQNRRTEFKVI 650
>gi|107024166|ref|YP_622493.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|105894355|gb|ABF77520.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
Length = 247
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 10/161 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLD---KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ K +H + ++L+ ++ ++ + G++ + +
Sbjct: 92 EMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTIE------F 145
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL
Sbjct: 146 ETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYL 205
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I + + ++ G PI ND GR N+RIE ++
Sbjct: 206 ITKS-IPPQQMTTTGVGPDQPIAPNDMADGRARNRRIEFRV 245
>gi|310822107|ref|YP_003954465.1| peptidoglycan-associated lipoprotein (pal) family protein
[Stigmatella aurantiaca DW4/3-1]
gi|309395179|gb|ADO72638.1| Peptidoglycan-associated lipoprotein (Pal) family protein
[Stigmatella aurantiaca DW4/3-1]
Length = 177
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 53/174 (30%), Gaps = 15/174 (8%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
+ I + S C S G S + + V
Sbjct: 9 ILIALSASACATKS--------------AATVSNEGLSGPTTPRPPPAPVAEKPSVPDED 54
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D + + L + L+ +A L + P + I HT +GT + NL
Sbjct: 55 ADGASLAFGPIYYELDSTTLRPESRETLERLAEALRRRPGARVTISGHTCELGTTEYNLA 114
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ Q RA + K + + ++V + + P + N+R E +
Sbjct: 115 LGQRRAAMAKD-YLVKLGVGPGNVAVVSYGEESPAVLGSGEEVWSRNRRSEFNL 167
>gi|120602698|ref|YP_967098.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|120562927|gb|ABM28671.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
gi|311234162|gb|ADP87016.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
Length = 344
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ L+ +L A I+ P + + HT ++GT NL +S
Sbjct: 235 VIVLRNVQFALNSAKLDASATSILTEAARIIKANPGKKLLVAGHTCNLGTDAYNLKLSDA 294
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
RA +K +L+++GV ++R + GF P N T+ GR N+R+E+
Sbjct: 295 RAKSVKDFLVKQGVEASR-LDTFGFGESQPKYDNGTEQGRSMNRRVEL 341
>gi|104782795|ref|YP_609293.1| flagellar motor protein MotD [Pseudomonas entomophila L48]
gi|95111782|emb|CAK16506.1| flagellar motor protein MotB [Pseudomonas entomophila L48]
Length = 285
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K + + D D F ++ + V + + + F S
Sbjct: 84 KDSEQTDAGLAQTSADPLKTITDDVHDAFGDLIKSNQMTVRGNELWVEIELNSSLLFASA 143
Query: 86 VFLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ +++ +A IL F + + ++ TD++ N +S RA I
Sbjct: 144 DAMPSDVAFEIIEKVAKILKPFAN-PVHVEGFTDNLPIRTAQYPTNWELSSARAASIVRL 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV+ R SV G+ P+ NDT GR N+R+ + I +++
Sbjct: 203 LAMEGVNPARMASV-GYGEYQPVAGNDTADGRARNRRVVLVISRNLEVRR 251
>gi|163755848|ref|ZP_02162966.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Kordia algicida OT-1]
gi|161324369|gb|EDP95700.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Kordia algicida OT-1]
Length = 648
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 61/134 (45%), Gaps = 7/134 (5%)
Query: 58 LQDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L+ + D +T IP+ + + L + ++ K+P+ I ++SH
Sbjct: 516 LEKEEVPFEIGDDLAVTLNIPIIYFDFDKSNIRPDAAAELAKVIAVMKKYPTLKIDVRSH 575
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVG 171
TDS G+ N+ +SQ R + Y+I +G+ ++R ++ RG+ ++ ++
Sbjct: 576 TDSRGSDSYNMALSQRRNQSTRDYIISKGIDASR-LTGRGYGETRHVNKCSNGVKCSEEE 634
Query: 172 RQNNQRIEIQIFPR 185
Q N+R E + +
Sbjct: 635 HQLNRRSEFIVVEK 648
>gi|148360690|ref|YP_001251897.1| OmpA family transporter outer membrane protein [Legionella
pneumophila str. Corby]
gi|148282463|gb|ABQ56551.1| outer membrane protein, OmpA family protein [Legionella pneumophila
str. Corby]
Length = 240
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 58/177 (32%), Gaps = 8/177 (4%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
G+ SG L + V D + +
Sbjct: 55 TGIGAVAGVIASGTAS-------GTLIGAAAGGTVGLVASIYRDSKRKIIRDLQKQDIQY 107
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V S L + P L + +LN +P + I + TD++G+
Sbjct: 108 VEYGDTRTLIIPTDKYFMFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSRS 167
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +SQ +A+ + ++L + + + G+ K I N G N+RIEIQ
Sbjct: 168 HKRKLSQAQAETMMTFLWAN-GIAAKRLKAEGYGDKNAISDNAIIHGSAQNRRIEIQ 223
>gi|300727039|ref|ZP_07060458.1| immunogenic 23 kDa lipoprotein PG3 [Prevotella bryantii B14]
gi|299775583|gb|EFI72174.1| immunogenic 23 kDa lipoprotein PG3 [Prevotella bryantii B14]
Length = 229
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 85/221 (38%), Gaps = 35/221 (15%)
Query: 2 IKELGLSMFIMTTISGCGLAS----------------------------REKKKVFLHKS 33
+K +++ + T+S CG + +
Sbjct: 4 MKITVVALAALLTVSSCGTSQGTGTGIGAGAGAVLGGLIGGLANNSHHGTGAVVGAAIGA 63
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM---ITCYIPVHV-SFVSEVFLE 89
+ R G+ +DK + E Q+ + + + I + + + L+
Sbjct: 64 AVGGLAGNRIGAHMDKKKAEIAQQVSNAKVEEVTDANGLKAIKVTFDSGLQFDLGKSTLK 123
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L A+ L P + IQ +TD+ G NL +S +RA + SYL+ +GVSS+
Sbjct: 124 SAAKNDLAKFASTLKNDPMLAVDIQGYTDATGGDAINLPLSDKRAKAVSSYLVSQGVSSS 183
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+F +V G+A PI N T N+R+E+ ++ + K
Sbjct: 184 QFKNVAGYASANPIV-NATVA--PENRRVEVYLYASDKMVK 221
>gi|209695291|ref|YP_002263220.1| outer membrane protein A [Aliivibrio salmonicida LFI1238]
gi|208009243|emb|CAQ79504.1| outer membrane protein A [Aliivibrio salmonicida LFI1238]
Length = 367
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V + + L + I L P++ ++I HTDS G+ K
Sbjct: 242 VKAEKLTLNELNGQALFGFDSAKLSSEVEAHFDSILERLKNNPTSELSIVGHTDSQGSDK 301
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N +S RA + +Y G++ +R I V G P+ N+T GR N+R+++
Sbjct: 302 YNEGLSLRRAQSVANYFESNGIAMSR-IKVEGRGETDPVADNNTLKGRSMNRRVDLI 357
>gi|307609455|emb|CBW98949.1| hypothetical protein LPW_07341 [Legionella pneumophila 130b]
Length = 240
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 58/177 (32%), Gaps = 8/177 (4%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
G+ SG L + V D + +
Sbjct: 55 TGIGAVAGVIASGTAS-------GTLIGAAAGGTVGLVASIYRDSKRKIIRDLQKQDIQY 107
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V S L + P L + +LN +P + I + TD++G+
Sbjct: 108 VEYGDTRTLIIPTDKYFMFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSRS 167
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +SQ +A+ + ++L + + + G+ K I N G N+RIEIQ
Sbjct: 168 HKRKLSQAQAETMMTFLWAN-GIAAKRLKAEGYGDKNAISDNAIIHGSAQNRRIEIQ 223
>gi|258627656|ref|ZP_05722431.1| Outer membrane protein A [Vibrio mimicus VM603]
gi|258580055|gb|EEW05029.1| Outer membrane protein A [Vibrio mimicus VM603]
Length = 194
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 22/191 (11%)
Query: 14 TISGCGLASREKK------KVFLHKS---------NDTDIVNKRFGSSLDKAE----DEF 54
++GCG + ++ V + + L + +
Sbjct: 1 MLTGCGSLATDRMFNDNLLDVAPKGDFDVRYPEWGMAPQLNSAGVQGPLKQVRTSSYEAL 60
Query: 55 QMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ L GI + GD + + + + L +A L I
Sbjct: 61 RQFLLSNGIDHEIMPGDYPMIKLKNTIKFDTGSAKVSVQSKQWLDRMAQFLASESGIDIV 120
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
++ HTD+ GT K N +S++RA + + + + I RG+ P TN TK GR
Sbjct: 121 LEGHTDNTGTQKFNDSLSEKRASSV-KTALVQRQVAQNAIYTRGYGEHVPACTNKTKNGR 179
Query: 173 QNNQRIEIQIF 183
N+R+E++
Sbjct: 180 ACNRRVEVRFI 190
>gi|51244590|ref|YP_064474.1| peptidoglycan-associated lipoprotein precursor [Desulfotalea
psychrophila LSv54]
gi|50875627|emb|CAG35467.1| related to peptidoglycan-associated lipoprotein precursor
[Desulfotalea psychrophila LSv54]
Length = 231
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 66/205 (32%), Gaps = 25/205 (12%)
Query: 1 MIKELGLSMFI-------MTTISGCGL-------ASREKKKVFLHKSNDTDIVNKRFGSS 46
M K+ S+F + +I GC +++ + N+ +G
Sbjct: 26 MKKKFYASLFFSMIIGATILSIGGCNSKKVVAPPTGNAQEEYNIPAIPPAQDENQDYGEE 85
Query: 47 L---------DKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVSEVFLEKKFLPML 96
D + +L + + + + ++
Sbjct: 86 DLPPVVGSLDDTDSNAAAEELASKQSEAYLQQHGRSSIEFQPVYFKFDQTMINPEMQEVI 145
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
A +L + P+ I ++ +TD GT + N+ + ++RA ++ YLI I
Sbjct: 146 FENAQVLKRNPTLYITVEGNTDDRGTNEYNMALGEKRAINVEKYLISL-GIGENRIRTVS 204
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ P+ T+ N+R +
Sbjct: 205 LGEERPLFPTQTEAAYLYNRRADFI 229
>gi|329944220|ref|ZP_08292479.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328530950|gb|EGF57806.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 462
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 4/163 (2%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL--QDTGIVVSRIGDMITCYIPVHVSFV 83
+ + D++ K ++ D Q D V R T + V+F
Sbjct: 122 AEESKAGYSAADVLAKAELTTSDPGPCRLQSHTVAADGSSDVKRDEASTTVTVAGDVTFA 181
Query: 84 -SEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L + +L + + K+P + I HTD + +N +S+ RA + L
Sbjct: 182 VDSDQLSAQADSVLAGVVEQIKKYPSGGELTITGHTDDVADDAHNQDLSERRAKAVSGRL 241
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +V G P ND++ +Q N+R+E+ + P
Sbjct: 242 KTLTDLSAWKEAVSGKGESSPRVPNDSEENKQANRRVEVTLKP 284
>gi|78358626|ref|YP_390075.1| chemotaxis protein MotB [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78221031|gb|ABB40380.1| chemotaxis protein MotB [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 242
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 2/136 (1%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
D E D + + + + + V F L +L +A +L ++
Sbjct: 98 DMLPPEVDTATLDENLRIMQDPQGLAIVLTDGVLFRPGSWELTAPARKLLAPLADVL-EY 156
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
S + I HTD + R + SV G+ P+++N
Sbjct: 157 SSADVTISGHTDDSPASGVDNYDLSGRRAMAVLDFFLESGLGAERFSVSGYGPDKPLESN 216
Query: 167 DTKVGRQNNQRIEIQI 182
T GR N+R+EI +
Sbjct: 217 ATPQGRAQNRRVEILL 232
>gi|87120689|ref|ZP_01076582.1| flagellar motor protein [Marinomonas sp. MED121]
gi|86163917|gb|EAQ65189.1| flagellar motor protein [Marinomonas sp. MED121]
Length = 292
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 6/167 (3%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A E + + K+ + + ++ + V IT +
Sbjct: 83 AQGEAYVDKSTADLEREKQVKQTEEDAKQISSVLREEISKGTVEVETQERTITIRLKEKG 142
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERAD 135
SF L F+P++ +I +L T IA++ HTD+I G +N +S RA
Sbjct: 143 SFESGSAELNFDFIPIIDMIRDVLIGIQGT-IAVEGHTDNIPVNSGRFGSNWQLSSARAI 201
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L G + SV G+A P+ NDT R +N+R+E+ I
Sbjct: 202 SVAEELFATGQLEQKRFSVTGYADTRPLAPNDTFFNRASNRRVELII 248
>gi|298206796|ref|YP_003714975.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
gi|83849428|gb|EAP87296.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
Length = 630
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 59/154 (38%), Gaps = 7/154 (4%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
G + + E + IVV + + + K +L
Sbjct: 479 GETGDVDGEENESIDFELER--AKDMIVVDETTKQEKIDLETIYFDFDKADITPKAAAVL 536
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
++N +P VI I+SHTDS G+ K N +S RA + Y+ +G++ R +S +G
Sbjct: 537 DKAVKLMNFYPDMVINIESHTDSRGSKKYNYSLSDRRAKATQQYIYSQGIAEERIVSAQG 596
Query: 157 FAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
+ + ++ + N+R + I R
Sbjct: 597 YGEQRLLNECKDGVKCSDEEHDVNRRSDFIILKR 630
>gi|39996844|ref|NP_952795.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
gi|39983732|gb|AAR35122.1| OmpA domain protein [Geobacter sulfurreducens PCA]
gi|298505859|gb|ADI84582.1| OmpA family outer membrane protein [Geobacter sulfurreducens KN400]
Length = 524
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
P + L + L +A + + V + I H D+IG++ N+ +S +
Sbjct: 409 FRFPDVSFDFDQWSLSAEGKKALSEVAEQIRRDKRWVYLRIDGHADNIGSVGYNMDLSLK 468
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ-IFPRGN 187
RA + SYLI R + V+G PI N T GR+ N+R EI + P+
Sbjct: 469 RAISVASYLIAREGIDPSRLFVKGLGKSKPIGDNKTAEGRKLNRRGEILFLIPKDE 524
>gi|27376195|ref|NP_767724.1| hypothetical protein blr1084 [Bradyrhizobium japonicum USDA 110]
gi|27349334|dbj|BAC46349.1| blr1084 [Bradyrhizobium japonicum USDA 110]
Length = 464
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 69/186 (37%), Gaps = 12/186 (6%)
Query: 8 SMFIMTTISGCGLAS--REKKKVFLHKSNDTDIVNKRFGSSLDK-------AEDEFQMQL 58
+ + +S + ++V L + + L K + E ++
Sbjct: 279 VVAALGALSRLSTGTLVVSDREVKLSGDALYEGAGNDIRAGLGKDFPKNWQYKPEITVKP 338
Query: 59 QDTGI--VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V + ++ +L + + P+T I + H
Sbjct: 339 AAGPVDGTVCQQLFSELLNKGKIRFATKRADIDPDSAGILDHLIETALRCPTTNIDVAGH 398
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD+ G N +S++RA + YL++ G+ ++R + G+ P+ NDT G+ N+
Sbjct: 399 TDADGEDAFNQALSEKRAQAVIDYLVKAGLPASR-FTAIGYGSTQPVAGNDTDDGKAQNR 457
Query: 177 RIEIQI 182
RIE +
Sbjct: 458 RIEFLV 463
>gi|222102518|ref|YP_002539557.1| OmpA family protein [Agrobacterium vitis S4]
gi|221739119|gb|ACM39852.1| OmpA family protein [Agrobacterium vitis S4]
Length = 332
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 50/135 (37%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
L+ E D + + + L+ + L +A L +
Sbjct: 196 LEGRAMETGEVTADAQAMSDSLAKTGHIALYGIQFETDSAALKAESDKTLAQMAEFLTQD 255
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
S + I HTDS G L+ N+ +SQ RA + L + + + +G P +N
Sbjct: 256 VSRKVYIVGHTDSSGALERNMNLSQARAAAVVKALTAKFGIDSDRLQPKGIGPYAPAASN 315
Query: 167 DTKVGRQNNQRIEIQ 181
GR N+R+E+
Sbjct: 316 ANDAGRAKNRRVEMV 330
>gi|71906334|ref|YP_283921.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71845955|gb|AAZ45451.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 165
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 66/177 (37%), Gaps = 18/177 (10%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGI 63
+G++ + + GC + +E+ + + + + L+ + E +L I
Sbjct: 1 MGIAGLLAIGLVGCASSPKEEAVATVAVAPKAATASAPSAAELEARQLKEAAEKLAGKSI 60
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
++ ++ +LQ A +L ++P ++++ +TD G+
Sbjct: 61 ----------------YFDYDNFTIKTEYNALLQQQAELLKRYPKLGVSLEGNTDERGSS 104
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ NL + Q+RA+ + + + F + P + N+R++
Sbjct: 105 EYNLSLGQKRAEAV-RKALTILGVPEAKVEAVSFGKEKPKADCPEEKCWSQNRRVDF 160
>gi|288940353|ref|YP_003442593.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
180]
gi|288895725|gb|ADC61561.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
Length = 608
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 4/164 (2%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
++ ++ D + +A QL T + G +++
Sbjct: 449 ETARQSVQPEAPSADQSEAAAELARLRALQTRFAQLNGT---FTERGLLLSLAESELSFP 505
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L L L+ IA +L P I+ HTDS+G+ N +S +RA+ ++ L+
Sbjct: 506 TGRATLPTGELASLERIAELLKAHPELTARIEGHTDSLGSAALNQSLSLQRAEAVRQALV 565
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+RGV R +S G PI N T GR N+R+E+ I R
Sbjct: 566 ERGVDGGR-LSAEGLGPTRPIADNATAEGRGKNRRVEVYILDRD 608
>gi|229522237|ref|ZP_04411653.1| protein F-related protein [Vibrio cholerae TM 11079-80]
gi|229340222|gb|EEO05228.1| protein F-related protein [Vibrio cholerae TM 11079-80]
Length = 204
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 73/203 (35%), Gaps = 24/203 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREK-------------------KKVFLHKSNDTDIVNKR 42
+K + + ++GCG ++ + +T ++
Sbjct: 1 MK--FWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWGYAPQKNTSVMPNA 58
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIA 100
+ ++ + L GI + GD + V + + L +A
Sbjct: 59 MTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFEIGSAKVSMASKQWLDTVA 118
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L I ++ HTD+ G+ K N +++ RA+ + + + + I RGF
Sbjct: 119 RFLAAESGIDIVLEGHTDNTGSEKLNDKLAERRANAV-KAALVQSRVAQNAIYTRGFGEN 177
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P TN TK GR N+R+EI+
Sbjct: 178 VPACTNSTKNGRACNRRVEIRFI 200
>gi|167584247|ref|ZP_02376635.1| outer membrane protein, OmpA/MotB family [Burkholderia ubonensis
Bu]
Length = 165
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 58/174 (33%), Gaps = 19/174 (10%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ ++ + GC A++ + +++ + +
Sbjct: 9 VIVVLALLGGCHHAAKTPENAGMNQGAVGQAPGTP------------------SVVTDEL 50
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
++ ++L +LQ A L + PS + IQ +TD GT + NL
Sbjct: 51 NNPNSPLAKRSIYFDFDAYDVKSEYLTLLQAHADYLRRHPSQRVLIQGNTDERGTSEYNL 110
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ Q R+ + S L+ + F + P+ + N+R ++
Sbjct: 111 ALGQRRSHAVMSALVTL-GVPETQLEAVSFGKEKPVALGHDEASWSQNRRADMV 163
>gi|254228902|ref|ZP_04922324.1| OmpA family protein [Vibrio sp. Ex25]
gi|262396751|ref|YP_003288604.1| protein F-related protein [Vibrio sp. Ex25]
gi|151938579|gb|EDN57415.1| OmpA family protein [Vibrio sp. Ex25]
gi|262340345|gb|ACY54139.1| protein F-related protein [Vibrio sp. Ex25]
Length = 224
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 66/208 (31%), Gaps = 29/208 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK----RFGSSLDKAEDEFQMQ 57
+K+ L + + ++GC ++ + +G +
Sbjct: 17 MKQWFLIVCGI--LTGCSSLDQDMVPGGNILDTAPKTNTELRHPEWGYPSASSVASSPRT 74
Query: 58 LQDTGIVVSRI---------------------GDMITCYIPVHVSFV-SEVFLEKKFLPM 95
Q V + G + + V F L +
Sbjct: 75 YQTERASVKKSQNVTSLEMFLNRHNIPHETLSGGHLMIRLKEQVHFQTGSAQLSAQSQDW 134
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
++ I L + I H DS G N +S++RA ++ L+ + R S R
Sbjct: 135 IRNIGHYLAGRTDVDVVIDGHADSTGAASFNDTLSEKRAREVEKQLLATSIPRQRVFS-R 193
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
GF P +N T G+ N+R+E+ +
Sbjct: 194 GFGEYVPQCSNSTANGKACNRRVELTLI 221
>gi|325525952|gb|EGD03644.1| hypothetical protein B1M_15465 [Burkholderia sp. TJI49]
Length = 360
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 7/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
+ ++ + V F ++ P++ IA + K P
Sbjct: 223 LRQLLKDEIAAGTVSVDEDARRSAVTFRGDAMFLPGGASVQASMNPLIAKIAAEIAKVPG 282
Query: 109 TVIAIQSHTDSIGTLKNN----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I +TD++ +S+ERA + L GV +NR + G P+
Sbjct: 283 -KVTIIGYTDNVPIRSRQFSSNQALSEERATQVMQMLQAAGVPANR-LEAVGKGDADPVG 340
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T GR N+R+EI +
Sbjct: 341 DNRTAQGRAQNRRVEIDV 358
>gi|323357271|ref|YP_004223667.1| outer membrane protein [Microbacterium testaceum StLB037]
gi|323273642|dbj|BAJ73787.1| outer membrane protein [Microbacterium testaceum StLB037]
Length = 165
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + +L +A +L + + HTD+IGT N ++S+ RA
Sbjct: 52 DAVLFDFDSAEIRPDAAGVLDSLAALLTQGAVPAATVSGHTDAIGTDAENQVLSERRAQA 111
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQI 182
+ L +RG ++ + G+ P+ N D GRQ N+R+EI +
Sbjct: 112 VVDALRRRGTQTD--WTAEGYGESRPVAANELDGVDNPAGRQLNRRVEILV 160
>gi|325068011|ref|ZP_08126684.1| OmpA/MotB domain protein [Actinomyces oris K20]
Length = 499
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 51/162 (31%), Gaps = 9/162 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A+ + +D I V+
Sbjct: 158 SATIPQYTRDEADPKQALAAPVPIERYTKALDDSTSTHAGGKDITVTL--------ASDV 209
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIK 138
L LQ +A L ++P+ ++I HTD + N +S++RA+ +K
Sbjct: 210 TFASDSADLASGAEAQLQTVAGQLAQYPNGGTLSIVGHTDDVQDDAYNQTLSEKRANAVK 269
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ L Q SV G P + T R N+R+EI
Sbjct: 270 TRLEQLTKLDKWQTSVSGKGESQPKINDTTDEARAVNRRVEI 311
>gi|171319661|ref|ZP_02908754.1| type VI secretion system OmpA/MotB family protein [Burkholderia
ambifaria MEX-5]
gi|171095114|gb|EDT40122.1| type VI secretion system OmpA/MotB family protein [Burkholderia
ambifaria MEX-5]
Length = 411
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 7/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
+ Q ++ + V F ++ P++ IA + K P
Sbjct: 274 LKQLLQDEIAAGTVSVDEDARHSAVTFRGDAMFKPGGASVQASMNPLISKIAAEIAKVPG 333
Query: 109 TVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I +TD++ +N ++S+ERA + L GV +NR + G P+
Sbjct: 334 -KVTIIGYTDNVPIRSRHFASNQMLSEERATQVMQMLQTAGVPANR-LEAVGKGDADPVG 391
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T GR N+R+EI +
Sbjct: 392 DNRTAQGRAQNRRVEIDV 409
>gi|163748690|ref|ZP_02155943.1| OmpA family protein [Shewanella benthica KT99]
gi|161331800|gb|EDQ02604.1| OmpA family protein [Shewanella benthica KT99]
Length = 199
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 70/188 (37%), Gaps = 8/188 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ +++ +T +S C D D V D
Sbjct: 2 KTFITLLAITLLSACSSIVTMDGNTTQIHDLNDMDQDGVIVARERCNDTVMGATIDNYGC 61
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + ++ +++IA+ +N+F +T + I+ H
Sbjct: 62 GKVKPIHQRSELKI-----LFANDSYYIAPLHYDQVEVIASFMNEFKNTKVTIEGHCSKT 116
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ ++NL +SQ RAD + S L +R + + G++Y P+D + T + N+R+
Sbjct: 117 GSYQHNLSLSQNRADAVTSLLTERFSIAPDRLIAIGYSYDRPVDESGTHRAQTRNRRVIA 176
Query: 181 QIFPRGNI 188
++ +
Sbjct: 177 EVTGEDTM 184
>gi|113969550|ref|YP_733343.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113884234|gb|ABI38286.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 191
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 63/185 (34%), Gaps = 4/185 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSN----DTDIVNKRFGSSLDKAEDEFQMQ 57
IK L++ + + ++ V K + G E +Q
Sbjct: 4 IKLTCLALSLSLILPAYAWQDTDQDGVPDIKDACPNTPANTTVMANGCVYQAEEKASSIQ 63
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
D + + ++ L L+ L+ T + + HT
Sbjct: 64 CDLNDPSTYSAADCHNIETAIVYFEFAIAEVDLSQWKALALVKAFLDANTETRLTLVGHT 123
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D +GT + N +S RA +K L++ + +V G P+ N + GR+ N+R
Sbjct: 124 DIVGTPEFNYQLSLRRAQNVKRILVEDYGFNPNRFTVIGKGISEPVADNHSSEGRRLNRR 183
Query: 178 IEIQI 182
++ +
Sbjct: 184 VQFIV 188
>gi|327405440|ref|YP_004346278.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320948|gb|AEA45440.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 367
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + L P L+ + K+P+ + + HTD++G +N ++S E
Sbjct: 257 VYVLHNLQFESGKSILLPNEYPELENFIRHVEKYPNQTLLVTGHTDNVGNKGDNKMLSLE 316
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ IK YL+ + + I + G + P+D+N+T+ GR+ N+R+EI I
Sbjct: 317 RANAIKQYLVAK-GINKNKIVIEGKGDEIPLDSNETEEGRKKNRRVEISII 366
>gi|291616741|ref|YP_003519483.1| Pal [Pantoea ananatis LMG 20103]
gi|291151771|gb|ADD76355.1| Pal [Pantoea ananatis LMG 20103]
Length = 192
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 61/181 (33%), Gaps = 13/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ IM ++ C ++ N
Sbjct: 24 VLKGLMLALPIM-AVAACSSHKNNNNDQSGAGADGAYGANSG-----------MNGNGNM 71
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ +R+ + + + ++ + ML A L PS + I+ H D
Sbjct: 72 SSDEQARLQMQQLQQNNIVYFGLDKYDVQSDYAQMLDQHANFLRSNPSYKVTIEGHADER 131
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S +S+ + + P + N+R +
Sbjct: 132 GTPEYNIALGERRANAV-KMYLQGKGVSADQMSIVSYGKEKPAVLGHDEAAYAKNRRAVL 190
Query: 181 Q 181
Sbjct: 191 V 191
>gi|167721446|ref|ZP_02404682.1| ompA family protein [Burkholderia pseudomallei DM98]
Length = 243
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 83 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 142
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K S + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 143 TGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRTSNIALSQARADAVKGYLV 202
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI ND+ GR N+RIE +
Sbjct: 203 TK-GIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEFR 240
>gi|116688507|ref|YP_834130.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|116646596|gb|ABK07237.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
Length = 316
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 10/161 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLD---KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ K +H + ++L+ ++ ++ + G++ + +
Sbjct: 161 EMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTIE------F 214
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L + +L +A L K + + I HTD+ G +N+ +SQ RAD +K YL
Sbjct: 215 ETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYL 274
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I + + ++ G PI ND GR N+RIE ++
Sbjct: 275 ITKS-IPPQQMTTTGVGPDQPIAPNDMADGRARNRRIEFRV 314
>gi|329888410|ref|ZP_08267008.1| peptidoglycan-associated lipoprotein [Brevundimonas diminuta ATCC
11568]
gi|328846966|gb|EGF96528.1| peptidoglycan-associated lipoprotein [Brevundimonas diminuta ATCC
11568]
Length = 184
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 66/190 (34%), Gaps = 30/190 (15%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFL----------HKSNDTDIVNKRFGSSLDKAEDE 53
L M +++ C E + + G+ +E +
Sbjct: 8 RLAAVGVAMASLAACTKPKVEPAVPVETPPPAVGPQYPTAPTGPVSGGNVGAPAPGSEQD 67
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
F V +GD + + + + P L A L ++P + I
Sbjct: 68 F----------VVNVGDRV-------YFDLDSYSVRAEAQPRLDAQAAWLARYPQVTVRI 110
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ + D GT + NL + RA+ ++SYLI RGV + R ++ F + PI +
Sbjct: 111 EGNADERGTREYNLALGARRAEAVRSYLISRGVPAARIDTIS-FGKERPIAEGSNESAWA 169
Query: 174 NNQ--RIEIQ 181
N+ R I
Sbjct: 170 QNRNARTAIV 179
>gi|254474819|ref|ZP_05088205.1| flagellar motor protein [Ruegeria sp. R11]
gi|214029062|gb|EEB69897.1| flagellar motor protein [Ruegeria sp. R11]
Length = 655
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 53/165 (32%), Gaps = 14/165 (8%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ + + + L V GD + L +
Sbjct: 493 AAQLSDKAQDLEQYRSEFFGRLRDVL-GNQEGVRIEGDRFVF-ASEVLFAPGSADLSPEG 550
Query: 93 LPMLQLIATILNKFP-------STVIAIQSHTDS-----IGTLKNNLLISQERADVIKSY 140
+ +A IL + +I + HTD +N +SQ RA + Y
Sbjct: 551 RAEIAKVARILQTVAAAIPQGINWIIRVDGHTDDTPLGAHPKFADNWELSQGRALSVVRY 610
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++Q +S GF P++ +T R N+RIE++ R
Sbjct: 611 MVQALGIPPERLSANGFGEYQPVNPAETPEARAQNRRIELKFTER 655
>gi|83941258|ref|ZP_00953720.1| OmpA family protein [Sulfitobacter sp. EE-36]
gi|83847078|gb|EAP84953.1| OmpA family protein [Sulfitobacter sp. EE-36]
Length = 191
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 58/179 (32%), Gaps = 11/179 (6%)
Query: 8 SMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSS----LDKAEDEFQMQLQDTG 62
+ + + A ++ I G D AE + G
Sbjct: 16 MIAATFVLQASAADAQTRSQQGRDKGQYIPTIWVDPDGCEHWVMDDGAEGYMTPHVTRQG 75
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
I V R G++ + + +A + I HTDS +
Sbjct: 76 IPVCRRGNVCGVMNTDQFFNTDSYRVHPQGRA---RLAEFFKTTGAVSYIISGHTDSRAS 132
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N+ +S RA+ + S Q S R VRG+ + P +N T G N+R+EI
Sbjct: 133 DAYNMKLSLNRANAVASIAQQ---SGARIADVRGYGERMPAASNGTAGGMAKNRRVEII 188
>gi|161520469|ref|YP_001583896.1| hypothetical protein Bmul_3921 [Burkholderia multivorans ATCC
17616]
gi|160344519|gb|ABX17604.1| type VI secretion system OmpA/MotB family protein [Burkholderia
multivorans ATCC 17616]
Length = 431
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 7/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
+ + ++ + V F ++ P++ IA + K P
Sbjct: 294 LKQLLKDEIAAGTVSVDEDARRSVVTFRGDAMFRPGGASVQASMNPLIAKIAAEIAKVPG 353
Query: 109 TVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I +TD++ G +N +S+ERA + L GV +NR + G P+
Sbjct: 354 -KVTIVGYTDNVPIRSGQFASNQALSEERATQVMQMLQAAGVPANR-LEAVGKGDADPVG 411
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T GR N+R+EI +
Sbjct: 412 DNRTAQGRAQNRRVEIDV 429
>gi|153829691|ref|ZP_01982358.1| OmpA family protein [Vibrio cholerae 623-39]
gi|148874812|gb|EDL72947.1| OmpA family protein [Vibrio cholerae 623-39]
Length = 207
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 73/203 (35%), Gaps = 24/203 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREK-------------------KKVFLHKSNDTDIVNKR 42
+K + + ++GCG ++ + +T +++
Sbjct: 4 MK--FWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWGYAPQKNTSVMSNA 61
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIA 100
+ ++ + L GI + GD + V + L +A
Sbjct: 62 MTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVA 121
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L I ++ HTD+ G+ K N +++ RA+ + + + + I RGF
Sbjct: 122 RFLATESGIDIVLEGHTDNTGSEKLNDKLAERRANAV-KAALVQSRVAQNAIYTRGFGEN 180
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P TN TK GR N+R+EI+
Sbjct: 181 VPACTNSTKNGRACNRRVEIRFI 203
>gi|119503684|ref|ZP_01625767.1| Flagellar motor protein [marine gamma proteobacterium HTCC2080]
gi|119460746|gb|EAW41838.1| Flagellar motor protein [marine gamma proteobacterium HTCC2080]
Length = 312
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 6/142 (4%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILN 104
+ + +++ I V G I I SF L+ FL +L LN
Sbjct: 137 DAEMLRRLLKAEIEAGQIDVESEGRTIVIRIREKGSFPSGSAQLDIGFLEVLDKTGFALN 196
Query: 105 KFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ I I+ HTD++ +N +S R+ + L+ +++ G A
Sbjct: 197 EIKGL-IFIEGHTDNVPINTARYGSNWDLSAARSVAVAERLLDGPKMDPIRLTISGHADT 255
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
P N + GR N+R+E+ +
Sbjct: 256 RPQAPNQSWEGRAQNRRVEVVV 277
>gi|85374727|ref|YP_458789.1| hypothetical protein ELI_09500 [Erythrobacter litoralis HTCC2594]
gi|84787810|gb|ABC63992.1| hypothetical protein ELI_09500 [Erythrobacter litoralis HTCC2594]
Length = 170
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 60/185 (32%), Gaps = 19/185 (10%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M + + + +++ C + ++ ++ F +
Sbjct: 1 MNTKFAAVMMLAGTASLAACKTTAPDELPPDPGPVATAPTTPTTPAGPAVGTQEHFVRAV 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I ++ LQ A L+++P+ + I+ H D
Sbjct: 61 NGQNI---------------IYFDTDRFNIDSADAAALQTQAQYLSQYPNVTVTIEGHAD 105
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR- 177
GT NL + + RA+ K+YL+ IS + + P+ T T N+R
Sbjct: 106 ERGTRDYNLALGERRANAAKNYLVSL-GIPATRISTVSYGEERPVATASTPEAWAQNRRA 164
Query: 178 IEIQI 182
+ + I
Sbjct: 165 VTVVI 169
>gi|99080684|ref|YP_612838.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99036964|gb|ABF63576.1| OmpA/MotB [Ruegeria sp. TM1040]
Length = 1619
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTL 123
R GD + + + + + L +L+ A L + V I+ HTDS G+
Sbjct: 455 QRFGDSLRVTVE---FATGKADIREAGLGVLREAADALKARGAENYVFLIEGHTDSTGSD 511
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K NL +S RA ++ Y ++ + + G+ + P+ TN T+ G+Q N+R+EI+
Sbjct: 512 KINLPLSDARAKSVERYFVENAGIAPERLQTVGYGPRIPLATNATEGGKQINRRVEIR-- 569
Query: 184 PRGNI 188
P GNI
Sbjct: 570 PYGNI 574
>gi|167950042|ref|ZP_02537116.1| flagellar motor protein MotB [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 151
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 6/134 (4%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
++ + + V I I SF L F ++ I ++ P +
Sbjct: 2 LDKEIDEGMLEVETEATKIIIRIQEKGSFGSGRATLNPGFFDVISKITKVIASTPG-KVV 60
Query: 113 IQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ HTD I ++N +S +RA + ++ +SV G A P+ ND+
Sbjct: 61 VAGHTDDIPISTKRFRSNWELSSDRAVTVVHAMLSNHGLDPSRVSVEGHADSSPLVPNDS 120
Query: 169 KVGRQNNQRIEIQI 182
R N+R+E+ I
Sbjct: 121 WANRAKNRRVELII 134
>gi|15612119|ref|NP_223771.1| putative Outer membrane protein [Helicobacter pylori J99]
gi|4155645|gb|AAD06633.1| putative Outer membrane protein [Helicobacter pylori J99]
Length = 179
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 59/184 (32%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + + GC K + + +K E + +
Sbjct: 1 MKRSSVFSFLVAFLLVVGCSHKMDNKTVAGDVSTKAVQTAPVTTEPAPEKEEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGESKPKCVQKTRECYRENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|326798978|ref|YP_004316797.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326549742|gb|ADZ78127.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 269
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 44 GSSLDKAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK-FLPMLQLI 99
+ ++ +D+ Q L +++G+ V + + + F S + + L +
Sbjct: 110 EEAGNQLKDKLQRALLGFKESGLTVDMREGKVYVLLADKLLFSSGSIIIDQRGKQALAEL 169
Query: 100 ATILNKFPSTVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
A +LN P +A++ HTD+ G +K+N +S R+ + YL + + +
Sbjct: 170 AKVLNTQPEINMAVEGHTDNQKVRSLGQIKDNWDLSVLRSTSVVRYLTEEEGIDPKRLIA 229
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G P+DT DT R N+RIEI + P+
Sbjct: 230 TGKGEFTPVDTADTPEARSANRRIEIVLSPK 260
>gi|307944546|ref|ZP_07659886.1| outer membrane lipoprotein Omp16 [Roseibium sp. TrichSKD4]
gi|307772295|gb|EFO31516.1| outer membrane lipoprotein Omp16 [Roseibium sp. TrichSKD4]
Length = 163
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 62/184 (33%), Gaps = 33/184 (17%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+L ++ I+ ++ C + + + +
Sbjct: 12 KLFATVAILMFLAACAQTKPDLAGGAGNVAPGSGQD------------------------ 47
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V +GD I + L + L LN++ + ++ H D GT
Sbjct: 48 FVVNVGDRI-------YFAEDQSTLSSQARATLDKQVQWLNRYSQYTVTVEGHADERGTR 100
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ NL + RA+ + YL+ RG+S+ R ++ + + P+ + N+R + +
Sbjct: 101 QYNLALGARRANSARDYLVSRGISTTRIKTIS-YGKERPVAVCNNDSCWTQNRRA-VTVL 158
Query: 184 PRGN 187
Sbjct: 159 NNAT 162
>gi|110598626|ref|ZP_01386892.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
gi|110339738|gb|EAT58247.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
Length = 150
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + + L+ A L PS + ++ H D+ GT + NL + + RA
Sbjct: 44 LGDVFFDFDKSDIRTDAVDQLKTNAQWLQANPSQKVVVEGHCDNRGTAEYNLALGERRAA 103
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ G + R +V + + P +T+ N+R
Sbjct: 104 AARDFVVNLGTDAARVKTVS-YGEERPFAQGNTEEAWAQNRRAHFI 148
>gi|313674311|ref|YP_004052307.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312941009|gb|ADR20199.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 315
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 63/161 (39%), Gaps = 9/161 (5%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFVSEVFL-E 89
+ + V ++++ + + L ++ + V + + + F S + +
Sbjct: 144 AELEKVLADKEAAVNALKQKVSEALLNFKENDLTVEVKNGKVYVSLAEQLLFNSGSTVVD 203
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS-----YLIQR 144
K + L+ +A +L I ++ HTD + NN + + ++
Sbjct: 204 TKGVEALKKLAQVLKDNQDVNIVVEGHTDDVPISGNNKYLKDNWDLSVLRATSIVRILTN 263
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S ++ G P +ND+ GR+ N+R EI + P+
Sbjct: 264 NGASPERVTAAGKGEFAPKSSNDSAEGRRENRRTEIILTPK 304
>gi|256422985|ref|YP_003123638.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256037893|gb|ACU61437.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 1026
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 63 IVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + + ++ F S + + LP L +A +L + + HTD+ G
Sbjct: 901 VELKKNEKEVVNKAFSNLQFASAKAEIAVSSLPSLDKMAALLQAHREWQLLLSGHTDNEG 960
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
T N +S++R++ ++ YL+ +GV + R I+ +G+ P+ TN ++ GR N+R+E++
Sbjct: 961 TETFNQTLSEKRSEAVRQYLVTKGVDAER-ITTKGYGQSKPLTTNSSEAGRGKNRRVEME 1019
Query: 182 I 182
I
Sbjct: 1020 I 1020
>gi|91794084|ref|YP_563735.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91716086|gb|ABE56012.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 377
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 62/156 (39%), Gaps = 4/156 (2%)
Query: 36 TDIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
D ++DK D ++ TG V + + + ++ +
Sbjct: 221 GDADKDGVNDNIDKCPDTPMTHKVDATGCSVYEFVTKMY-DLGKVLFDNDSAVIKPGYYA 279
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
++++ L K+P+ + I+ H ++G N+ +S+ RA + + L+ + S I
Sbjct: 280 DMEILGDHLVKYPAHTVIIEGHASNVGKPDYNMSLSERRAQAVATALMTKYGISASRIKS 339
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
G+ P +T + N+RIE + G K+
Sbjct: 340 VGYGVTKPKMAGNTAEAHRVNRRIEAIVT--GTEKR 373
>gi|229513150|ref|ZP_04402615.1| protein F-related protein [Vibrio cholerae TMA 21]
gi|229349560|gb|EEO14515.1| protein F-related protein [Vibrio cholerae TMA 21]
Length = 204
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 74/203 (36%), Gaps = 24/203 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREK-------------------KKVFLHKSNDTDIVNKR 42
+K + + ++GCG ++ + +T +++
Sbjct: 1 MK--FWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWGYAPQKNTSVMSNA 58
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIA 100
S + ++ + L GI + GD + V + L +A
Sbjct: 59 MTQSRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVA 118
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L I ++ HTD+ G+ K N +++ RA+ + + + + I RGF
Sbjct: 119 RFLATESGIDIVLEGHTDNTGSEKLNDKLAERRANAV-KAALVQSRVAQNAIYTRGFGEN 177
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P TN TK GR N+R+EI+
Sbjct: 178 VPACTNSTKNGRACNRRVEIRFI 200
>gi|115358234|ref|YP_775372.1| hypothetical protein Bamb_3484 [Burkholderia ambifaria AMMD]
gi|115283522|gb|ABI89038.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 432
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
+ Q ++ + V F ++ P++ IAT + K P
Sbjct: 295 LKQLLQDEIAAGTVSVDEDARHSAVTFRGDAMFKPGGASVQASMNPLIAKIATEIAKVPG 354
Query: 109 TVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I +TD + +N ++S+ERA + L GV +NR + G +P+
Sbjct: 355 -KVTIIGYTDKVPIRSRHFASNQVLSEERATQVMQMLQAAGVPANR-LEAVGKGDAHPVG 412
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T GR N+R+EI +
Sbjct: 413 DNRTAQGRAQNRRVEIDV 430
>gi|319406244|emb|CBI79881.1| Outer membrane lipoprotein omp16 [Bartonella sp. AR 15-3]
Length = 168
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 63/179 (35%), Gaps = 29/179 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
LG+ ++ T+ GCG S + + +
Sbjct: 12 LGVVFCLLLTLIGCGKKSIDTNNSVSNSGFNNVQAGSS---------------------- 49
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
T + + F +E +L A L ++P I I+ H D GT
Sbjct: 50 -----QDFTVNVGDRIFFSLDSSSIESDAEYILARQAEWLLRYPHYFITIEGHADERGTR 104
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ NL + Q RA ++ YLI GVSS R +V + + P+ D N+R + +
Sbjct: 105 EYNLALGQRRAVAVRDYLISLGVSSQRMNTVS-YGKERPVAICDNISCWNQNRRAVLVV 162
>gi|303328323|ref|ZP_07358761.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. 3_1_syn3]
gi|302861653|gb|EFL84589.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. 3_1_syn3]
Length = 155
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 61/185 (32%), Gaps = 35/185 (18%)
Query: 2 IKELGLSMFIMTTIS---GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K L + ++ ++ GC + D E + +
Sbjct: 1 MKRYALILALVMALAAGFGCAKKTT------------------GEPGYDDGLTPEMRAAI 42
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q + ++ ++ ML+ A ++ K+PS + I+ + D
Sbjct: 43 QQ-------------ITDARVYFAFDKFNIQPEYKDMLKTKAELMKKYPSIRVRIEGNCD 89
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + NL + + RA YL+ + + + + + P + N+R
Sbjct: 90 DRGTQEYNLALGERRARAAYEYLVTL-GVNPSQLEMISYGKENPAVQGTGEAVWAKNRRD 148
Query: 179 EIQIF 183
+ ++
Sbjct: 149 DFRVI 153
>gi|172064675|ref|YP_001812325.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171998160|gb|ACB69076.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 552
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 79 HVSFVSEVFLEKKF-LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + L ++ P + I+ H DS G+ + N+L+S+ RA I
Sbjct: 440 SLFASGKATFSPEAAHRELAHALQLIQANPDQRVLIEGHADSEGSPRANILLSEARARAI 499
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ +L +G S +++G PI N ++ GR N+R+++ +FP +++
Sbjct: 500 RDWLAAKGGLSVARFAIQGLGDVRPIADNSSEAGRALNRRVDVSLFPDSTLRR 552
>gi|189353340|ref|YP_001948967.1| hypothetical protein BMULJ_04580 [Burkholderia multivorans ATCC
17616]
gi|189337362|dbj|BAG46431.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
Length = 432
Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 7/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
+ + ++ + V F ++ P++ IA + K P
Sbjct: 295 LKQLLKDEIAAGTVSVDEDARRSVVTFRGDAMFRPGGASVQASMNPLIAKIAAEIAKVPG 354
Query: 109 TVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I +TD++ G +N +S+ERA + L GV +NR + G P+
Sbjct: 355 -KVTIVGYTDNVPIRSGQFASNQALSEERATQVMQMLQAAGVPANR-LEAVGKGDADPVG 412
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T GR N+R+EI +
Sbjct: 413 DNRTAQGRAQNRRVEIDV 430
>gi|117621166|ref|YP_856420.1| OmpA family protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117562573|gb|ABK39521.1| OmpA family protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 162
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 63/183 (34%), Gaps = 29/183 (15%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ GL +++ ++GC A E L++ G
Sbjct: 8 KTGLIGLLLSVLAGCQSAPH-------------------------GLTAEQIAVLKEQGF 42
Query: 64 VVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
++ G T V F + L K +++ + L + I HTDS G
Sbjct: 43 RLTDEGW--TLDFSNRVLFANNADALTPKTRVVVEKLGKTLQEVGLNRARIDGHTDSNGA 100
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S +RA + L+ + +RG + PI N T GR N+R+ I I
Sbjct: 101 ADYNDQLSYKRAQSVADVLVS-VGMPQANLDIRGRGERDPIADNKTAAGRAENRRVAIVI 159
Query: 183 FPR 185
Sbjct: 160 SNE 162
>gi|91791747|ref|YP_561398.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91713749|gb|ABE53675.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 201
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 68/172 (39%), Gaps = 12/172 (6%)
Query: 16 SGCG-----LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
+GC ++ F D D V + I
Sbjct: 14 TGCSMNDISSMDSPTEQKFDLNDQDRDGVIVARERCPETLSGATISNYGCGQIKPIHERQ 73
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ + + L+ ++ ++LIA ++ ++P+T + I+ H G+ + N+ +S
Sbjct: 74 ELKI-----LFPTNSYVLDPQYYGQIELIANMMKQYPNTNVTIEGHCSKKGSYELNMALS 128
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI--EI 180
RA+ + L + + ++ G+++ P+D +DT+ + N+R+ EI
Sbjct: 129 HNRANAVTQVLTSQFGIAPSRLNAIGYSFDRPVDMSDTEEAHRRNRRVIAEI 180
>gi|312962752|ref|ZP_07777240.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens WH6]
gi|311282969|gb|EFQ61562.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens WH6]
Length = 166
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 24/169 (14%), Positives = 54/169 (31%), Gaps = 22/169 (13%)
Query: 14 TISGCGLASREKK-KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
GC + + N N E +
Sbjct: 18 VAVGCSSKGGDNAGEGAAVDPNAGYGANSGAVDGSLSEEAALRA---------------- 61
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I L+ + + L + A L + ++ +TD GT + N+ + +
Sbjct: 62 ---ITTFYFEYDSSDLKPEAMRALDVHAKDLKAN-GARVVLEGNTDERGTREYNMALGER 117
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA ++ YL+ + + + + + + P+ T + N+R+E++
Sbjct: 118 RAKAVQRYLVLQ-GVAPGQLELVSYGKERPVATGHDEQSWAQNRRVELR 165
>gi|283853608|ref|ZP_06370844.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
gi|283570999|gb|EFC19023.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
Length = 345
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ +F+P+L+ I+ + ++ HTDS+G+ + N+ + Q
Sbjct: 234 IVVFRSIYFDFDKYNIKPEFVPVLEEGTAIIKSKTGMKVVLEGHTDSVGSDQYNMKLGQR 293
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RAD +K++ +++G+ ++R ++ F P+ TN T GR N+R I+
Sbjct: 294 RADSVKAFFVKKGIDASRIETIS-FGESDPVATNKTAQGRALNRRCVIK 341
>gi|162451840|ref|YP_001614207.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161162422|emb|CAN93727.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 628
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 10/180 (5%)
Query: 17 GCGL----ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV-VSRIGDM 71
C A+R+ KK D D V + ++ Q+ V D
Sbjct: 448 ACPTVKGPANRDPKKNGCPDDPDGDGVRGAADACPNERGPSDPDPRQNGCPRFVRVNADE 507
Query: 72 ITCYIPVHVSFVSEV---FLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNL 127
I PV + ++ +L + + + P + +Q HTD GT + NL
Sbjct: 508 IKTSKPVQFVVYGKTRAETVDPISDEVLYEVRDTIQQNPDIELVEVQGHTDDNGTEEYNL 567
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+SQ+RAD + S+L+ GV + + +G+ ++ P+ N K GRQ N+R++ I R
Sbjct: 568 RLSQQRADAVLSWLVAAGVPREKLV-AKGYGFEQPVGDNRVKTGRQKNRRVQFVIVKRKE 626
>gi|83647008|ref|YP_435443.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83635051|gb|ABC31018.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 493
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 1/164 (0%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
K KV++ + ++E + +SR D +
Sbjct: 326 ASKDAAKGKVYVALFIGGYEDETAVQQIILESEALEDDLITVDVDSLSRDIDETGKALLY 385
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V F + ++ + P L+ IA +L K P ++ + HTD G ++N+ +S RA +
Sbjct: 386 GVFFDTDKAVVKDESKPTLEAIAGLLKKRPELLLYVTGHTDDTGAFQHNIELSSARAKAV 445
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
LI+ + ++ G P N + G++ N+R+E+
Sbjct: 446 VERLIKDYGVAQARLTPYGVGPVAPEADNLSDAGKKRNRRVELI 489
>gi|52840894|ref|YP_094693.1| outer membrane protein, OmpA family protein [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|52628005|gb|AAU26746.1| outer membrane protein, OmpA family protein [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
Length = 249
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 58/177 (32%), Gaps = 8/177 (4%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
G+ SG L + V D + +
Sbjct: 64 TGIGAVAGAIASGTAS-------GTLIGAAAGGTVGLVASIYRDSKRKIIRDLQKQDIQY 116
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V S L + P L + +LN +P + I + TD++G+
Sbjct: 117 VEYGDTRTLIIPTDKYFMFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSRS 176
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +SQ +A+ + ++L + + + G+ K I N G N+RIEIQ
Sbjct: 177 HKRKLSQAQAETMMTFLWAN-GIAAKRLKAEGYGDKNAISDNAIIHGSAQNRRIEIQ 232
>gi|189347858|ref|YP_001944387.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
gi|189342005|gb|ACD91408.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
Length = 416
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
V + L+ + + I IL F + + +TD++G + NL +S++R
Sbjct: 306 FSFDRLVFDTGKATLKPESQEQIGNINEILKAFSAVSLKFGGYTDNVGDPQANLRLSKDR 365
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
A+ + + I + + G+ ++P+ N T+ GRQ N+R++ ++ +
Sbjct: 366 AEAVMTE-IVKLGIDKARLDAEGYGAEHPVADNATEEGRQKNRRVDCRVTKK 416
>gi|327404330|ref|YP_004345168.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327319838|gb|AEA44330.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 809
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 59/167 (35%), Gaps = 15/167 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC +K ++ I K E E Q L
Sbjct: 656 GCPWPDTDKDGLYDKDDACPTIPGPIENRGCPKIEKEEQEILNTA--------------F 701
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + L +A +L K P + I HTD+ G K NL +S+ RA+
Sbjct: 702 ENLEFASGKAIILATSFKSLDDLAALLIKKPEWKLQIAGHTDNKGDAKKNLTLSKNRAEA 761
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+K YL + + F PI TN T GRQ N+R+E+ +
Sbjct: 762 VKKYLTSK-GVDATKLKPEWFGQTKPIATNATPEGRQKNRRVEMNVI 807
>gi|242277549|ref|YP_002989678.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242120443|gb|ACS78139.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 172
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS--TVIAIQSHTDSIGT 122
++ G + I V+ + +K P++ + L P + + HTDS G
Sbjct: 36 ITDPGGRVFLKIE---FKVNSAKISEKANPVVDSLGVALTSGPGQSMQVRLVGHTDSAGK 92
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ N +S +RA+ +++YL I V+G PI +N+ GR N+R+E+
Sbjct: 93 SEYNRSLSLKRAESVRNYLAVHFNIDPARIEVQGMGEDQPIASNENAQGRAQNRRVEVIN 152
Query: 183 FPRGN 187
+ +
Sbjct: 153 ISKKS 157
>gi|149375611|ref|ZP_01893380.1| Flagellar motor protein [Marinobacter algicola DG893]
gi|149360013|gb|EDM48468.1| Flagellar motor protein [Marinobacter algicola DG893]
Length = 277
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 59/160 (36%), Gaps = 6/160 (3%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV 86
+++ + + E + ++ + V+ + +F E
Sbjct: 99 DERAEADAPTKIPAGVIDLASRMIQELEPEVASEALSVNYDESRVVIRFSEEATFRSGEA 158
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLI 142
++ +P+++ + +L+ + + +TD G ++N +S RA + L+
Sbjct: 159 AIKPGMVPIIERVVEVLSGCTG-DVLVAGYTDDRPIASGRYRSNWDLSAARAVSVVHELV 217
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G A P+ ND+ R N+R+EI I
Sbjct: 218 MNRQVPAERVVAAGRAETNPLVPNDSPENRAKNRRVEIAI 257
>gi|150005847|ref|YP_001300591.1| OmpA family outer membrane protein [Bacteroides vulgatus ATCC 8482]
gi|149934271|gb|ABR40969.1| outer membrane protein, OmpA family [Bacteroides vulgatus ATCC
8482]
Length = 239
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 81/223 (36%), Gaps = 44/223 (19%)
Query: 2 IKELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKR---------------- 42
+K+ + ++ SGCG + K + +
Sbjct: 1 MKKTKIMALLLSATLVFSGCGNMNNTAKGGLIGGGGGAALGAIIGGIAGHGKGAAIGAAV 60
Query: 43 -----------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFV-SEVF 87
G +DKA +E Q+Q + + + + F
Sbjct: 61 GAAVGTGAGVLIGKKMDKAAEE-AAQIQGAQVEQVTDNNGLQAVKVTFDSGILFNTGNAA 119
Query: 88 LEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL--------KNNLLISQERADVIK 138
L + L A LN+ ++I +TD+ G + NL +SQERA +
Sbjct: 120 LSAQAKSALSKFANNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSIQKNLNLSQERAQSVA 179
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
SYL+ GVS+++ SV G PI NDT GRQ N+R+E+
Sbjct: 180 SYLLGCGVSNSQIKSVEGLGQADPIGNNDTAEGRQQNRRVEVY 222
>gi|330961246|gb|EGH61506.1| flagellar motor protein MotD [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 265
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 61/170 (35%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K + + + D F L+ + V + + + F
Sbjct: 84 KDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLLKSDQMTVRGNELWVEIELNSSMLFGSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K +++ ++ I+ +F I ++ TD N +S R+ I
Sbjct: 144 DAMPSDKAFSIIEKVSGIVKRF-DNPIHVEGFTDDQPINTSQFPTNWELSSARSASIVRM 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV+ R SV G+ PI N T GR N+R+ + I ++++
Sbjct: 203 LAMDGVNPARLASV-GYGEFQPIAPNTTAAGRAKNRRVVLVISRNLDVRR 251
>gi|308183230|ref|YP_003927357.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
PeCan4]
gi|308065415|gb|ADO07307.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
PeCan4]
Length = 179
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 61/184 (33%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + I+GC ++ + + +K E + +
Sbjct: 1 MKRSSAFSFLVAFLFIAGCKHNMDKETVAGDVSAKAVQSAPVSTETVQEKQEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCVQKTRECYRENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|71282605|ref|YP_268470.1| peptidoglycan-associated lipoprotein [Colwellia psychrerythraea
34H]
gi|71148345|gb|AAZ28818.1| peptidoglycan-associated lipoprotein [Colwellia psychrerythraea
34H]
Length = 184
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 66/184 (35%), Gaps = 9/184 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ + +S C S ++ DT+ + KA++ Q+
Sbjct: 6 IVKCLAIALPLTI-LSACSSNSDTDEQ----SQVDTNAQITKNAEDAQKAQEAVQVTAAK 60
Query: 61 TGIVVSRIGDMITCYIPVH---VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + + +F +L A LN + I+ H
Sbjct: 61 RAAEIEEQKRQELAQLRSEHIIYFDFDVSNVNDQFSAILDAHAKFLNANSDVKVLIEGHA 120
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + N+ + + RA + ++ + ++V + + P+ + ++ N+R
Sbjct: 121 DERGTPEYNIALGERRAKSVV-TYLENMGVAAGQLTVVSYGEEKPMVKDRSENAFSKNRR 179
Query: 178 IEIQ 181
+
Sbjct: 180 AVLV 183
>gi|312962248|ref|ZP_07776740.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
gi|311283585|gb|EFQ62174.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
Length = 295
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 7/169 (4%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-E 85
+ + S D F + + V + + + F S +
Sbjct: 85 NDSDETAAGVGGTSDPLKSIADDISAAFGDLISSNQMTVRGNELWVEIELNSSLLFASAD 144
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYL 141
+ ++ +A IL F + + ++ TD++ N +S RA I L
Sbjct: 145 AMPSDQAFTIIDKVAAILKPFEN-PVHVEGFTDNVPISTAQYPTNWELSSARAASIVRML 203
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+GVS R SV G+ P+ N T GR N+R+ + + ++++
Sbjct: 204 AMQGVSPGRLASV-GYGEFQPVANNATVEGRARNRRVVLVVSRNLDVRR 251
>gi|261212428|ref|ZP_05926713.1| protein F-related protein [Vibrio sp. RC341]
gi|260838359|gb|EEX65015.1| protein F-related protein [Vibrio sp. RC341]
Length = 182
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 3/134 (2%)
Query: 52 DEFQMQLQDTGIVVSRI-GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPST 109
++ + L GI + GD + + F + L +A L
Sbjct: 46 EQLRQYLVSNGIEHEIMPGDYPMIKLKNTIKFETGSAKVSASSKQWLDKMAQFLAGESGV 105
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I ++ HTD+ GT K N +S++RA + + + + I RG+ P TN+TK
Sbjct: 106 DIVLEGHTDNTGTQKFNDKLSEKRATSV-KSALVQRQVAQNAIYTRGYGEHVPACTNNTK 164
Query: 170 VGRQNNQRIEIQIF 183
GR N+R+E++
Sbjct: 165 KGRACNRRVEVRFI 178
>gi|269836612|ref|YP_003318840.1| OmpA/MotB domain-containing protein [Sphaerobacter thermophilus DSM
20745]
gi|269785875|gb|ACZ38018.1| OmpA/MotB domain protein [Sphaerobacter thermophilus DSM 20745]
Length = 233
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 66/209 (31%), Gaps = 28/209 (13%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ-------- 57
+++ ++ + ++ + K ++ Q
Sbjct: 24 LITLLLVFFVVMYSISKADSAKFQRFSTSVQQAFRVDVMEPGQPLGPALAEQDFRFMSFL 83
Query: 58 --------------LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
L V + I ++ V F EV L + +L IA I
Sbjct: 84 AIRAQIASLVQRYDLGLDAADVELTQEGIVIHLAESVLFPPGEVQLRPEAHRVLADIAAI 143
Query: 103 LNKFPSTVIAIQSHTDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ P + ++ HTD+ +N +S RA +L + G+A
Sbjct: 144 IGPMP-FPVRVEGHTDNVPPANPNYPDNWALSTMRAVSTVRFLSDVQGVPAERLVAVGYA 202
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
P N T GR+ N+R+++ I G+
Sbjct: 203 EHRPRADNRTLEGRRKNRRVDLVIVQPGS 231
>gi|167826034|ref|ZP_02457505.1| ompA family protein [Burkholderia pseudomallei 9]
Length = 247
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 87 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 146
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K S + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 147 TGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRTSNIALSQARADAVKGYLV 206
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI ND+ GR N+RIE +
Sbjct: 207 TK-GIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEFR 244
>gi|167588461|ref|ZP_02380849.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu]
Length = 223
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 7/184 (3%)
Query: 5 LGLSMFIMTTISGCGLASREKKK-VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ +F+ + + + L + + + + +
Sbjct: 39 TLMVLFLALYVLQLAKYNALDVRFQALAQQAAGKTNAPAHADAAQAWSALLKSLKEQGQV 98
Query: 64 VVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V + I + F + L +L IA +L P+T I ++ HTDS+
Sbjct: 99 TVVNAAHGVEIGINAKILFNVGDARLLPDASGVLARIAGVLKAHPATSILVEGHTDSVPI 158
Query: 123 ----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
++N +S RA + YL++R ++ G A P+ D R N+R+
Sbjct: 159 STAKYESNWELSSARAGAVVRYLVER-GVEPHRLAAIGRADNLPLVAGDDAAARAKNRRV 217
Query: 179 EIQI 182
I +
Sbjct: 218 TIFV 221
>gi|330721195|gb|EGG99305.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC2047]
Length = 307
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 75/174 (43%), Gaps = 7/174 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ ++ V + D D + D+ E F ++D I +S I + +
Sbjct: 89 ANKEGDVKAEVTGDGDYIGTLLSELSDQVESAFGDLVRDGEITISGSETWIEISLSSGLL 148
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADV 136
F L ++ LP+L+ I++IL+ + + + ++ TD G +N +S R+
Sbjct: 149 FNSGSANLNRQSLPVLEEISSILSGYEN-PVHVEGFTDDIPIQSGIFPSNWELSAARSAA 207
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ L+ ++ G+ PI +N++ GR N+R+ + + ++++
Sbjct: 208 VVR-LLSESGVEPNRLAAVGYGQFQPIASNESAEGRGKNRRVALIVSRDLDVRR 260
>gi|258543662|ref|YP_003189095.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-01]
gi|256634740|dbj|BAI00716.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-01]
gi|256637796|dbj|BAI03765.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-03]
gi|256640850|dbj|BAI06812.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-07]
gi|256643905|dbj|BAI09860.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-22]
gi|256646960|dbj|BAI12908.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-26]
gi|256650013|dbj|BAI15954.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-32]
gi|256653003|dbj|BAI18937.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256656057|dbj|BAI21984.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-12]
Length = 160
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 23/176 (13%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ ++ ++ +S C + S I GS D
Sbjct: 1 MRLKVVAALGMVALLSACAHDNANTGASNSAASTQPTISGPVPGSEAD------------ 48
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+V+ +GD + +++ L LQ A L K+P + + + D
Sbjct: 49 ---LVANVGDRV-------FYDLNKSGLRDDAKDTLQKQADWLAKYPQVNVEVAGNCDDR 98
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
GT + N+ + Q RA+ + YL+ + ++ IS + P D + N+
Sbjct: 99 GTEEYNIALGQRRANAARDYLVAK-GVASSRISTISYGKDRPTALGDDEDAWAQNR 153
>gi|228474110|ref|ZP_04058851.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624]
gi|228274624|gb|EEK13465.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624]
Length = 668
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + + + L I ++ + P+ IAI+SHTDS G+ NL +S R
Sbjct: 553 FNIEIIYFDFDKSNIRPDAAVDLAKIVEVMKEHPTIKIAIKSHTDSRGSDAYNLALSDRR 612
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTND---TKVGRQNNQRIEIQIF 183
A +++Q+G+ +R ++ +G+ + +N ++ Q N+R E I
Sbjct: 613 AKSTLEWMVQQGIDRSR-LTAKGYGETQLVNGCSNGVPCSEEEHQKNRRSEFIIT 666
>gi|220934640|ref|YP_002513539.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219995950|gb|ACL72552.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 227
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ ++ + + L + + L + + I + HTD+ G N+ +S+ RA+ +K
Sbjct: 115 LFAINSAAISPQGRAELDQLVSDLARLDNVQNIHVVGHTDNTGAADYNMDLSKRRAESVK 174
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+YL+++ I+ G P+ +N T GR N+R+EI I
Sbjct: 175 AYLVEK-GIRADLITTEGRGITQPVASNATTEGRAQNRRVEITI 217
>gi|49081460|gb|AAT50132.1| PA0973 [synthetic construct]
Length = 169
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 18/165 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + +N N +G+ + S + I
Sbjct: 21 GCSSKGGD---ASGEGANGGVDPNAGYGA-------------NSGAVDGSLSDEAALRAI 64
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + ++ HTD GT + N+ + + RA
Sbjct: 65 TTFYFEYDSSDLKPEAMRALDVHAKDLKG-SGQRVVLEGHTDERGTREYNMALGERRAKA 123
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+ + S + + + + P+ T + N+R+E++
Sbjct: 124 VQRYLVLQ-GVSPAQLELVSYGKERPVATGHDEQSWAQNRRVELK 167
>gi|15596170|ref|NP_249664.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa PAO1]
gi|107100429|ref|ZP_01364347.1| hypothetical protein PaerPA_01001454 [Pseudomonas aeruginosa PACS2]
gi|116048898|ref|YP_792301.1| peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa UCBPP-PA14]
gi|218893056|ref|YP_002441925.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa LESB58]
gi|254239321|ref|ZP_04932644.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa C3719]
gi|254245256|ref|ZP_04938578.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa 2192]
gi|296390668|ref|ZP_06880143.1| peptidoglycan-associated lipoprotein [Pseudomonas aeruginosa PAb1]
gi|81622520|sp|Q9I4Z4|PAL_PSEAE RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
Precursor
gi|9946880|gb|AAG04362.1|AE004530_15 Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa PAO1]
gi|115584119|gb|ABJ10134.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa UCBPP-PA14]
gi|126171252|gb|EAZ56763.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa C3719]
gi|126198634|gb|EAZ62697.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa 2192]
gi|218773284|emb|CAW29096.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa LESB58]
Length = 168
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 18/165 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + +N N +G+ + S + I
Sbjct: 21 GCSSKGGD---ASGEGANGGVDPNAGYGA-------------NSGAVDGSLSDEAALRAI 64
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + ++ HTD GT + N+ + + RA
Sbjct: 65 TTFYFEYDSSDLKPEAMRALDVHAKDLKG-SGQRVVLEGHTDERGTREYNMALGERRAKA 123
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+ + S + + + + P+ T + N+R+E++
Sbjct: 124 VQRYLVLQ-GVSPAQLELVSYGKERPVATGHDEQSWAQNRRVELK 167
>gi|114561619|ref|YP_749132.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114332912|gb|ABI70294.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 200
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 81/192 (42%), Gaps = 8/192 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L + + ++T +GC + + + N + R G + A + L
Sbjct: 1 MKYLIILLALIT--TGCSVNDIVESN-ASTQQNFDLADSDRDGVIM--ARERCASTLIGA 55
Query: 62 GIVVSRIG--DMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ G I + + F + +E ++ ++ +A ++ +P+T + I+ HT
Sbjct: 56 AVDNYGCGSIKDINERQDLKILFSNNSVVIEPQYYNQIERVANVMTTYPTTKVTIEGHTS 115
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ + NL +SQ+RA + L ++ G+++ PID + T + N+R+
Sbjct: 116 KRGSYELNLALSQKRAKAVIEVLENTFGIDPSRLNATGYSFDRPIDNSGTPEAEERNRRV 175
Query: 179 EIQIFPRGNIKK 190
++ I +
Sbjct: 176 VAEVTADDTIPE 187
>gi|167912756|ref|ZP_02499847.1| ompA family protein [Burkholderia pseudomallei 112]
Length = 248
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 88 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 147
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K S + I HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 148 TGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRTSNIALSQARADAVKGYLV 207
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ ++ G PI ND+ GR N+RIE +
Sbjct: 208 TK-GIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEFR 245
>gi|290475121|ref|YP_003468005.1| hypothetical protein XBJ1_2106 [Xenorhabdus bovienii SS-2004]
gi|289174438|emb|CBJ81232.1| Conserved hypothetical protein with OmpA/MotB domains (probable
component of SST VI cluster) [Xenorhabdus bovienii
SS-2004]
Length = 403
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 7/139 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPS 108
+D + + + V+ + D + F ++ LP+++ IA +N
Sbjct: 259 LQDMLRRESAAGLLNVTNLADRSIVTLRGDGLFNTGSTQIKNNELPVIKHIAETINNIKG 318
Query: 109 TVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I + +TD + +N +S RA +K ++ + + G P+
Sbjct: 319 -EILVIGYTDDVPINSSGFSSNYALSLARAKSVKREF-EKYLDHPERVRTEGRGESDPLF 376
Query: 165 TNDTKVGRQNNQRIEIQIF 183
NDT R N+R+EI +
Sbjct: 377 PNDTPSHRAKNRRVEIVLL 395
>gi|269796387|ref|YP_003315842.1| flagellar motor protein [Sanguibacter keddieii DSM 10542]
gi|269098572|gb|ACZ23008.1| flagellar motor protein [Sanguibacter keddieii DSM 10542]
Length = 295
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 57/174 (32%), Gaps = 9/174 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV------VSRIGDMI 72
+ S + S + ++ L G+ + G +I
Sbjct: 104 SGDGGDSTGAGDAASPADIAAARVEYQSFAELAEKIDTALAAGGMEGVVQFRIDERGLVI 163
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG--TLKNNLLIS 130
L ++ + + P+ I+I+ H DS+ +N +S
Sbjct: 164 GMITDEVFFASESAVLTPTSQAVVDTMTPFMLPLPN-EISIEGHADSVPTARYASNWELS 222
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+RA + +++ IS G+ P+ N+T G N+R+++ +
Sbjct: 223 SDRATQVLRRMVEADGMPPTRISAVGYGDSRPLQPNETAEGLTANRRVDLVVLS 276
>gi|167564292|ref|ZP_02357208.1| ompA family protein [Burkholderia oklahomensis EO147]
Length = 243
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 62/159 (38%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 83 DGTQIDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 142
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A L K S + I HTD+ G +N+ +SQ RAD + +
Sbjct: 143 TGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRASNIALSQARADAV-KGYL 201
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+++ ++ G PI +NDT GR N+RIE +
Sbjct: 202 VAKGIASQQLTTTGVGPDQPIASNDTNDGRARNRRIEFR 240
>gi|87118960|ref|ZP_01074858.1| OmpF [Marinomonas sp. MED121]
gi|86165351|gb|EAQ66618.1| OmpF [Marinomonas sp. MED121]
Length = 192
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ LE L L + L K S+ + I+ HTDS+G ++NL +SQ RA+ I
Sbjct: 61 DVRFHTNKFELEDNELKGLLKLGKFLQKHQSSDVFIEGHTDSMGDDEDNLRLSQNRANAI 120
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI--EIQIFPRGNIKK 190
K L+ + + S+ I G PI N+T+ GR N+R+ E+ +KK
Sbjct: 121 KQALVTKFLISSDRIIAIGHGENQPIANNETEYGRAVNRRVTAEVTHINNNELKK 175
>gi|332879955|ref|ZP_08447639.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332681951|gb|EGJ54864.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 650
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I + + + L I ++ + P I I+SHTDS G NL +S
Sbjct: 533 VLNIKEIYFDLDKSDIRPDAAVELAKIVEVMRENPKMKIDIRSHTDSRGADSYNLKLSDR 592
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTND---TKVGRQNNQRIEIQIFP 184
RA I + + ++ +G+ + +N T Q N+R E I
Sbjct: 593 RAKATLE-WIVKQGIERKRLTAKGYGETQLVNGCSNGVPCTDEEHQANRRSEFIIVS 648
>gi|15606305|ref|NP_213684.1| flagellar motor protein MotB [Aquifex aeolicus VF5]
gi|2983507|gb|AAC07084.1| flagellar motor protein MotB [Aquifex aeolicus VF5]
Length = 235
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 10/148 (6%)
Query: 46 SLDKAEDEFQMQLQDTGI--VVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
L K E + ++ GI + G+ + + F E L K+ ++ +
Sbjct: 89 ELKKVAQEIKAEMSKRGIWSDYALTGECLRIRVNTDKFFPPGEDTLMKEAKGLILGLCYK 148
Query: 103 LNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
L + + + I+ HTD S +N +S RA + + + +S G+A
Sbjct: 149 LKPY-ALPVDIEGHTDNRPISTPRFPSNWELSMARAISVIEVFEKECGYPSDKLSALGYA 207
Query: 159 YKYPIDTNDTKVGRQNNQRIEI--QIFP 184
PI +NDT GRQ N+R+E ++ P
Sbjct: 208 DTKPIASNDTPQGRQKNRRVEFCVKLLP 235
>gi|1000844|gb|AAA78948.1| 18.5 kDa protein [Bartonella bacilliformis]
Length = 171
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 69 GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ V F +E +L A L +P I I+ H D GT + NL
Sbjct: 22 EQDFAITVGDRVFFSLDSSVIEADAQRILVRQAEWLLLYPHHTIMIEGHADDRGTREYNL 81
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ Q RA ++ YL+ S + + + + P+ D N+R+ I I G
Sbjct: 82 ALGQRRAIAVRDYLVSL-GVSPQRMKTMSYGKERPVAVCDDISCWNQNRRVVISITS-GA 139
Query: 188 IKK 190
++K
Sbjct: 140 VRK 142
>gi|312892404|ref|ZP_07751899.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311295188|gb|EFQ72362.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 452
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L P+L + L I + + S GT +NL +S++RA+
Sbjct: 349 SNIQFEFDSSVLRTSSYPILDATSADLRT-GKKSITVNGYASSEGTAAHNLQLSKDRANS 407
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + I V+G +PI N T+ GR N+R+E +
Sbjct: 408 V-KTYLVNSGVDAKRIKVKGLGETHPIADNSTEDGRVLNRRVEFK 451
>gi|283955082|ref|ZP_06372585.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
414]
gi|283793449|gb|EFC32215.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
414]
Length = 319
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ G T + H F + + F ++ IA +L++ ++ HTD++
Sbjct: 197 EGALLDENGCEKTISLEGHFGF-DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNV 255
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ N +S+ RA + + +++ I G+ P +NDTK GR +N+R++
Sbjct: 256 GSRAYNQKLSERRAKSVANE-LEKYGVEKNRIKTIGYGQDNPRSSNDTKEGRADNRRVD 313
>gi|210135285|ref|YP_002301724.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
P12]
gi|210133253|gb|ACJ08244.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
P12]
Length = 179
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 62/184 (33%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + I+GC ++ + + +K E + +
Sbjct: 1 MKRSSVFSFLVAFLFIAGCKHNMDKETVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCTQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|170696413|ref|ZP_02887541.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170138674|gb|EDT06874.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 322
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 162 DGTQIDVKGEVRNESQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 221
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A + K + +AI HTD+ G +N+ +SQ RAD +K YL+
Sbjct: 222 TGSATLTPQGRAILDQMAAAMLKMATKTVAIIGHTDNSGNRTSNIALSQARADAVKGYLV 281
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + +S G PI +NDT GR N+RIE +
Sbjct: 282 AK-GIPPQQMSTTGVGPDQPIASNDTADGRARNRRIEFR 319
>gi|121725841|ref|ZP_01679141.1| OmpA family protein [Vibrio cholerae V52]
gi|147672308|ref|YP_001215442.1| OmpA family protein [Vibrio cholerae O395]
gi|121631606|gb|EAX63974.1| OmpA family protein [Vibrio cholerae V52]
gi|146314691|gb|ABQ19231.1| OmpA family protein [Vibrio cholerae O395]
gi|227015278|gb|ACP11487.1| protein F-related protein [Vibrio cholerae O395]
Length = 207
Score = 84.3 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 73/203 (35%), Gaps = 24/203 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREK-------------------KKVFLHKSNDTDIVNKR 42
+K + + ++GCG ++ + +T +++
Sbjct: 4 MK--FWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWGYAPQKNTSVMSNA 61
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIA 100
+ ++ + L GI + GD + V + L +A
Sbjct: 62 MTQQRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVA 121
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L I ++ HTD+ G+ K N +++ RA+ + + + + I RGF
Sbjct: 122 RFLATESGIDIVLEGHTDNTGSEKLNDKLAERRANAV-KAALVQSRVAQNAIYTRGFGEN 180
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P TN TK GR N+R+EI+
Sbjct: 181 VPACTNSTKNGRACNRRVEIRFI 203
>gi|262168510|ref|ZP_06036206.1| protein F-related protein [Vibrio cholerae RC27]
gi|262023039|gb|EEY41744.1| protein F-related protein [Vibrio cholerae RC27]
Length = 204
Score = 84.3 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 73/203 (35%), Gaps = 24/203 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREK-------------------KKVFLHKSNDTDIVNKR 42
+K + + ++GCG ++ + +T +++
Sbjct: 1 MK--FWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWGYAPQKNTSVMSNA 58
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIA 100
+ ++ + L GI + GD + V + L +A
Sbjct: 59 MTQQRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVA 118
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L I ++ HTD+ G+ K N +++ RA+ + + + + I RGF
Sbjct: 119 RFLATESGIDIVLEGHTDNTGSEKLNDKLAERRANAV-KAALVQSRVAQNAIYTRGFGEN 177
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P TN TK GR N+R+EI+
Sbjct: 178 VPACTNSTKNGRACNRRVEIRFI 200
>gi|296104273|ref|YP_003614419.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058732|gb|ADF63470.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 161
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 61/183 (33%), Gaps = 26/183 (14%)
Query: 1 MIKELGLSMFIM-TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K +F+ ++GC K + + N
Sbjct: 1 MLKRYFAPLFLASMVLTGCQSPPEGKFSPEQIAAMKSYGFN------------------- 41
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
GD + ++ L + ++ +A+ L + HTD+
Sbjct: 42 ------ELNGDWSLGLSDTILFDKNDARLRPESEAQIRTMASRLAATGLKHARMDGHTDN 95
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+ + + ++ +G KYP+ +N T GR N+R+
Sbjct: 96 YGEESYNEALSLKRANAVADVWAKGANIPRSNLTTQGLGKKYPVSSNSTAQGRAENRRVA 155
Query: 180 IQI 182
+ I
Sbjct: 156 VVI 158
>gi|327393167|dbj|BAK10589.1| peptidoglycan-associated lipoprotein precursor Pal [Pantoea
ananatis AJ13355]
Length = 174
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 61/181 (33%), Gaps = 13/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L L++ IM ++ C ++ N
Sbjct: 6 VLKGLMLALPIM-AVAACSSHKNNNNDQSGAGADGAYGANSG-----------MNGNGNM 53
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ +R+ + + + ++ + ML A L PS + I+ H D
Sbjct: 54 SSDEQARLQMQQLQQNNIVYFGLDKYDVQSDYAQMLDQHANFLRSNPSYKVTIEGHADER 113
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + +Q S +S+ + + P + N+R +
Sbjct: 114 GTPEYNIALGERRANAV-KMYLQGKGVSADQMSIVSYGKEKPAVLGHDEAAYAKNRRAVL 172
Query: 181 Q 181
Sbjct: 173 V 173
>gi|170703354|ref|ZP_02894140.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170131738|gb|EDT00280.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 243
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 1/143 (0%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+S++ + T V + + L L
Sbjct: 99 GVPPQASVEPPVAAQPQPVVQTQPVAAPVAQRQVLLQGSANFTFDSAALTPSARQELNRF 158
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ + + +TDS G +N+ +S+ RA + +YL + G
Sbjct: 159 LDANRDARFSRVTVTGYTDSQGAHAHNVRLSEARARAVATYLRTG-GLRAERFTTVGKGA 217
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
P+ +N T GR N+R+EI++
Sbjct: 218 AEPVVSNATAEGRAQNRRVEIEL 240
>gi|298486507|ref|ZP_07004567.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298158984|gb|EFI00045.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 268
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + + + + + L+ + + L
Sbjct: 123 ASAQQQGRWLEDQILS--LATTETDRGLVMTLGDVLFDAGHAELKSSASRTILKVVQFLQ 180
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P V+ I+ +TDS G + NL +S++RA + ++ + I V G++ ++P++
Sbjct: 181 INPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVAD-VLMDLGVDEKRIHVEGYSQQFPVN 239
Query: 165 TNDTKVGRQNNQRIEIQ 181
N ++ GR N+R+EI
Sbjct: 240 ANASERGRAQNRRVEIV 256
>gi|294678711|ref|YP_003579326.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
1003]
gi|294477531|gb|ADE86919.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
Length = 173
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 57/174 (32%), Gaps = 18/174 (10%)
Query: 10 FIMTTISGCGLASREKKKVFL-HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
M ++ C S+ + D GS D + +
Sbjct: 11 LAMIALAACNNPSKNGANGVVDPGGAYGDAGGVSQGSINDPNSPAYFSGKVGDTVR---- 66
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
V + L + L A LN + I+ H D GT + NL
Sbjct: 67 ------------FVVDQSTLTDEARATLSGQAQWLNSHGNYAAIIEGHADEQGTREYNLA 114
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ RA ++ YLI +GV + R +V + + PI T ++ N+R I
Sbjct: 115 LGARRASSVQQYLISQGVPATRLRTVS-YGKERPIATCASESCFSQNRRAVTVI 167
>gi|93005138|ref|YP_579575.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
gi|92392816|gb|ABE74091.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
Length = 533
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 1/167 (0%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+ + + + + + + + G
Sbjct: 317 TAALTKLVSDLQAAAPAMTVIAEGPLNEQTEIADSLTASEAAMDNLGQNPDPRDVARALS 376
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ V V + + +L ++ + P+ + I HTD NL +S+ERA
Sbjct: 377 LQVVNFEVDKAVIPDANKALLDRAVKLMEQVPNMTLMIIGHTDKTADAAYNLKLSEERAQ 436
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+K+YL+ +GV ++ ++ +G PI N T GR N+RIE +
Sbjct: 437 AMKAYLVAQGVDPSKLMT-KGMGETDPIADNTTDQGRFRNRRIEFVV 482
>gi|70728662|ref|YP_258411.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
gi|68342961|gb|AAY90567.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 418
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 3/158 (1%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEK 90
++ K + LD E + ++D+ + + R +++ V SF + L
Sbjct: 190 ADIPMPDPKITQAWLDDYEPRLREAVKDSKLQIERRENVLVVTALVDASFNPDRPAMLLP 249
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L +A + P T + I H D+ G N +S++RA + + G+ +R
Sbjct: 250 VTLGPFTRVAKAVEGDPKTAVLILGHADATGPTLANQKLSRDRAQSVAAIFSLSGLKQDR 309
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ +RG P ND+ GR N+R+EI + R +
Sbjct: 310 LM-LRGMGSVMPRAANDSPQGRSLNRRVEIMLTQRSTM 346
>gi|127512023|ref|YP_001093220.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
gi|126637318|gb|ABO22961.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 367
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 55/148 (37%), Gaps = 2/148 (1%)
Query: 37 DIVNKRFGSSLDKAEDEFQM-QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
D N D+ + ++ G V R + + +
Sbjct: 212 DSDNDGVTDDKDQCANTPSNHKVDANGCTVYREVTE-KHELGSIRFANNSAVVNSASYGQ 270
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
++ +A +N+ P + I H ++G N+ +S+ RA+ + L+ + S +S +
Sbjct: 271 IEKLANYMNQNPRATVLIGGHASNVGNPDYNMDLSERRANAVAELLVSKYGISQDRVSAK 330
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
G+ P+ + + N+RIE +
Sbjct: 331 GYGITQPLIEGKSAEANKANRRIEAHVT 358
>gi|83717470|ref|YP_438322.1| hypothetical protein BTH_II0120 [Burkholderia thailandensis E264]
gi|257141351|ref|ZP_05589613.1| hypothetical protein BthaA_19409 [Burkholderia thailandensis E264]
gi|83651295|gb|ABC35359.1| unnamed protein product; Similar to putative exported protein
[Burkholderia thailandensis E264]
Length = 558
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 65 VSRIGDMITCYIPVHVSF-VSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
VS G+ + F + LQ ++ P + I H+DS G+
Sbjct: 425 VSPRGESTAMQLDTVTLFATGQATFSPGAAQRELQHALRMILANPEQRVLIVGHSDSAGS 484
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NL +S+ RA I+ + + +GV RFI V+G +P+ N + +GR N+R+EI +
Sbjct: 485 DAVNLQLSKARARAIRDWFVDQGVLKTRFI-VQGAGDTHPVADNASPLGRAQNRRVEILL 543
Query: 183 FP 184
P
Sbjct: 544 IP 545
>gi|326772523|ref|ZP_08231807.1| hypothetical protein HMPREF0059_00908 [Actinomyces viscosus C505]
gi|326637155|gb|EGE38057.1| hypothetical protein HMPREF0059_00908 [Actinomyces viscosus C505]
Length = 417
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 61/172 (35%), Gaps = 8/172 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G G S K + + + + + + +
Sbjct: 245 GSGTYSDGKLSITNNGDGTAIVNGSTISAKPVPKAGKVGTFPSIDAAKPVQSCGTVITLE 304
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + L +AT++ + + IQ HTDS+ N +S++RA
Sbjct: 305 DSVLFDFGSSELRGEASTTLTNLATVIKDSKAPKVQIQGHTDSVSDDAFNQKLSEQRAQA 364
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQI 182
+ S L GV+++ + G+ P+ N D GR+ N+R+E+ +
Sbjct: 365 VSSALKSDGVAAD--LEAVGYGETKPVAPNENPDGSDNPAGRRLNRRVEVFV 414
>gi|229592294|ref|YP_002874413.1| putative OmpA family lipoprotein [Pseudomonas fluorescens SBW25]
gi|126214996|emb|CAM35533.1| OprL protein [Pseudomonas fluorescens]
gi|229364160|emb|CAY51808.1| putative OmpA family lipoprotein [Pseudomonas fluorescens SBW25]
Length = 166
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 24/169 (14%), Positives = 56/169 (33%), Gaps = 22/169 (13%)
Query: 14 TISGCGLASREKK-KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
GC + + N N E +
Sbjct: 18 VAVGCSSKGGDNAGEGAAVDPNAGYGANTGAVDGSLSEEAALRA---------------- 61
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I L+ + + L + A L + ++ +TD+ GT + N+ + +
Sbjct: 62 ---ITTFYFEYDSSDLKPEAMRALDVHAKDLKAN-GARVVLEGNTDARGTREYNMALGER 117
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA ++ YL+ + + + + + + P+ T + + N+R+E++
Sbjct: 118 RAKAVQRYLVLQ-GVAPGQLELVSYGKERPVATGNDEQSWAQNRRVELR 165
>gi|163854239|ref|YP_001642282.1| peptidoglycan-associated lipoprotein [Methylobacterium extorquens
PA1]
gi|218533185|ref|YP_002424001.1| peptidoglycan-associated lipoprotein [Methylobacterium
chloromethanicum CM4]
gi|240141700|ref|YP_002966180.1| Outer membrane lipoprotein omp16 precursor [Methylobacterium
extorquens AM1]
gi|163665844|gb|ABY33211.1| peptidoglycan-associated lipoprotein [Methylobacterium extorquens
PA1]
gi|218525488|gb|ACK86073.1| peptidoglycan-associated lipoprotein [Methylobacterium
chloromethanicum CM4]
gi|240011677|gb|ACS42903.1| Outer membrane lipoprotein omp16 precursor [Methylobacterium
extorquens AM1]
Length = 170
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 56/175 (32%), Gaps = 27/175 (15%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L L++ + C S D A+ G
Sbjct: 11 SLTLALCAALGLGACSKDS-------------------------DLADASGFGAGGPGGA 45
Query: 64 VVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
I V F S+ L L A+ L ++P I+ H D GT
Sbjct: 46 ARPGSAQDFVVNIGDRVFFESDSTDLTPTATATLDKQASWLQRYPRYSFLIEGHADERGT 105
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N + RA ++ YL RG+S++R +V + + P+ + N+R
Sbjct: 106 REYNYSLGARRAQTVQDYLASRGISASRMRTVS-YGKERPVAVCNDISCWSQNRR 159
>gi|83854735|ref|ZP_00948265.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
gi|83842578|gb|EAP81745.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
Length = 176
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 58/179 (32%), Gaps = 11/179 (6%)
Query: 8 SMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSS----LDKAEDEFQMQLQDTG 62
+ + + A ++ I G D AE + G
Sbjct: 1 MIAATFVLQASAADAQTRSQQGRDKGQYIPTIWVDPDGCEHWVMDDGAEGYMTPHVTRQG 60
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
I V R G++ + + +A + I HTDS +
Sbjct: 61 IPVCRRGNVCGVMNTDQFFNTDSYRVHPQGRA---RLAEFFKTTGAVSYIISGHTDSRAS 117
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N+ +S RA+ + S Q S R VRG+ + P +N T G N+R+EI
Sbjct: 118 DAYNMKLSLNRANAVASIAQQ---SGARIADVRGYGERMPAASNGTAGGMAKNRRVEII 173
>gi|295395656|ref|ZP_06805848.1| peptidoglycan-associated lipoprotein OprL [Brevibacterium
mcbrellneri ATCC 49030]
gi|294971472|gb|EFG47355.1| peptidoglycan-associated lipoprotein OprL [Brevibacterium
mcbrellneri ATCC 49030]
Length = 602
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 8/136 (5%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKF-PSTVIAIQSHTD 118
T VS GD + V F + L K + +A L K + ++ HTD
Sbjct: 275 TDASVSNRGDTSALNVSADVLFEFDSDKLNKDAQKTIDSVAEELKKSAKGQKVVVEGHTD 334
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT------KVGR 172
G N +S+ RA+ +K + + + + +GF PI N K +
Sbjct: 335 DEGDEGYNQGLSERRAESVKKAVEPKLSGAGIQLETKGFGETKPIVPNRDGKGNPIKKNQ 394
Query: 173 QNNQRIEIQIFPRGNI 188
N+R+ P+G I
Sbjct: 395 AKNRRVSFSYTPQGQI 410
>gi|149917198|ref|ZP_01905698.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149822114|gb|EDM81507.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 395
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 7/118 (5%)
Query: 70 DMITCYIPVHVSFV-SEVFLEK-----KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
D + + F + L+ +L + T+LN P I I HTDS G+
Sbjct: 268 DPCAIKLDGKIMFDSGKYDLKSRKFADSNSKLLDDVYTVLNTNPDITIEIGGHTDSKGSS 327
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++N +S+ R ++ YL+ +G+ +R I+ +G+ P+DTN TK GR+NN+R+EI
Sbjct: 328 RSNQRLSENRVKSVREYLVDKGIDGSR-ITFKGYGEDVPVDTNRTKEGRENNRRVEIL 384
>gi|298207484|ref|YP_003715663.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
gi|83850120|gb|EAP87988.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
Length = 626
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 63/150 (42%), Gaps = 8/150 (5%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
N ++ A E ++L+ +V+ + + + ++ + L
Sbjct: 482 SNSVTMAATKDATKELTVRLKPIEAIVTED----RVILNPILFDYDKSNIKPQAAFELDK 537
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ ++NK+P I ++SHTD+ G N+ +S+ RA Y++ + + IS +GF
Sbjct: 538 LVQVMNKYPEMEIFVESHTDNKGPNDYNMSLSERRAKSTVQYVVSK-GIAKERISGKGFG 596
Query: 159 YKYPID---TNDTKVGRQNNQRIEIQIFPR 185
P N + RQ N+R E I +
Sbjct: 597 ESKPAVECGENCSDEQRQTNRRSEFVIIKK 626
>gi|209550775|ref|YP_002282692.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536531|gb|ACI56466.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 177
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 51/173 (29%), Gaps = 25/173 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++ ++ C +
Sbjct: 20 VMIALVAGLALASCAKKNGGMPNSAGDIGLGGGAATPGSAQDF----------------- 62
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + L A L ++P+ I ++ H D GT +
Sbjct: 63 TVNVGDRI-------FFDTDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADERGTRE 115
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + RA K YL RGV + R ++ + + P+ D N+R
Sbjct: 116 YNLALGARRAAAAKDYLASRGVPAQRLKTIS-YGKERPVAVCDDISCWSQNRR 167
>gi|28869189|ref|NP_791808.1| motB protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|28852429|gb|AAO55503.1| motB protein [Pseudomonas syringae pv. tomato str. DC3000]
Length = 295
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K + + + D F ++ + V I + + F
Sbjct: 84 KDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSLLFVSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K +++ ++ I+ +F I ++ TD N +S R+ I
Sbjct: 144 DAMPSDKAFTIIEKVSGIVKRF-DNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVRM 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L G++ R SV G+ PI N T GR N+R+ + I ++++
Sbjct: 203 LAMDGINPARLASV-GYGEFQPIAPNTTAAGRAKNRRVVLVISRNLDVRR 251
>gi|75761764|ref|ZP_00741702.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74490749|gb|EAO54027.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 256
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 67/175 (38%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L + + KK ++ + + K + + + +
Sbjct: 83 LSASSLEAEQAKKQEEARAKE-KKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 141
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I ++ F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 142 TILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWEL 201
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 202 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 256
>gi|261856274|ref|YP_003263557.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261836743|gb|ACX96510.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 323
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 8/162 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-S 84
+ L + + + + L + VS + I + ++ F
Sbjct: 139 GETVLDHAKPSAQSSSANDKASQDQARALFAGL-GKDVDVSVVKGRINLRVKDNILFSSG 197
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSY 140
L + +L+ +A L IA+Q HTD++ +N +S RA +
Sbjct: 198 NSALSAAGMQLLKRLADRLKA-GDYPIAVQGHTDNVPIHTLQFPSNWELSAARAAAVVQE 256
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
LI +S GFA +PI +NDT GR N+R+++++
Sbjct: 257 LIA-SGVQPNRLSAIGFADTHPITSNDTASGRAENRRVDLEL 297
>gi|114570965|ref|YP_757645.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
gi|114341427|gb|ABI66707.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
Length = 173
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 60/177 (33%), Gaps = 17/177 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M +L + + C E D R +D ++ +
Sbjct: 1 MKIKLFAIAALGAFATACASTPVE------------DTAPVRDTRPVDPPIEDTRPIETG 48
Query: 61 TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
++ D V + L + L+ A L +P T I + + D
Sbjct: 49 ---PMAGSPDHFVATAGDRVFYGLDRHDLSDEARATLRRQAAWLASYPGTRILVAGNCDE 105
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
GT + NL + RA ++YLI +GV +R IS + + P + ++ N+
Sbjct: 106 RGTREYNLALGARRASAARTYLISQGVDPSR-ISTTSYGKERPSCSQSSETCWAVNR 161
>gi|30022590|ref|NP_834221.1| flagellar motor protein MotB [Bacillus cereus ATCC 14579]
gi|206969568|ref|ZP_03230522.1| chemotaxis protein MotB [Bacillus cereus AH1134]
gi|218232559|ref|YP_002369307.1| flagellar motor protein MotB [Bacillus cereus B4264]
gi|296504987|ref|YP_003666687.1| flagellar motor protein MotB [Bacillus thuringiensis BMB171]
gi|29898148|gb|AAP11422.1| Chemotaxis motB protein [Bacillus cereus ATCC 14579]
gi|206735256|gb|EDZ52424.1| chemotaxis protein MotB [Bacillus cereus AH1134]
gi|218160516|gb|ACK60508.1| chemotaxis protein MotB [Bacillus cereus B4264]
gi|296326039|gb|ADH08967.1| flagellar motor protein MotB [Bacillus thuringiensis BMB171]
Length = 262
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 67/175 (38%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L + + KK ++ + + K + + + +
Sbjct: 83 LSASSLEAEQAKKQEEARAKE-KKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 141
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I ++ F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 142 TILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWEL 201
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 202 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 256
>gi|260062002|ref|YP_003195082.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501]
gi|88783564|gb|EAR14735.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501]
Length = 375
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 53/153 (34%), Gaps = 3/153 (1%)
Query: 39 VNKRFGSSLD--KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
NK LD E +V I +P + L L
Sbjct: 220 SNKGAYYYLDGIVLEPYAGNGDTGRESLVGDIPKDSLLVLPSLLFEFDAHQLTDAGKEAL 279
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ L S + ++ HTDS G N +S++R + ++ + I G
Sbjct: 280 HRVYDALRSDLSLFLELRGHTDSRGAPAYNQQLSEQRCRAVAR-YLEGLGLDSVRIRWIG 338
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
F P+ N ++ GR+ N+R+E I ++
Sbjct: 339 FGAARPVAGNSSESGRRRNRRVEFLIRSEDPVQ 371
>gi|213967534|ref|ZP_03395682.1| motB protein [Pseudomonas syringae pv. tomato T1]
gi|301382871|ref|ZP_07231289.1| flagellar motor protein MotD [Pseudomonas syringae pv. tomato
Max13]
gi|302062803|ref|ZP_07254344.1| flagellar motor protein MotD [Pseudomonas syringae pv. tomato K40]
gi|302131302|ref|ZP_07257292.1| flagellar motor protein MotD [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|213927835|gb|EEB61382.1| motB protein [Pseudomonas syringae pv. tomato T1]
Length = 295
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K + + + D F ++ + V I + + F
Sbjct: 84 KDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSLLFVSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K +++ ++ I+ +F I ++ TD N +S R+ I
Sbjct: 144 DAMPSDKAFTIIEKVSGIVKRF-DNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVRM 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L G++ R SV G+ PI N T GR N+R+ + I ++++
Sbjct: 203 LAMDGINPARLASV-GYGEFQPIAPNTTAAGRAKNRRVVLVISRNLDVRR 251
>gi|153836901|ref|ZP_01989568.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|260362576|ref|ZP_05775496.1| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|260878366|ref|ZP_05890721.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|260896123|ref|ZP_05904619.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|260901510|ref|ZP_05909905.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|149749859|gb|EDM60604.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|308088130|gb|EFO37825.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308090275|gb|EFO39970.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308107674|gb|EFO45214.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|308115286|gb|EFO52826.1| outer membrane protein [Vibrio parahaemolyticus K5030]
Length = 205
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 76/197 (38%), Gaps = 12/197 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L +++ ++ ++ + ++ + + D + +
Sbjct: 1 MKKNLLITLALIIM---SHHSAYAQDELTYIPIPKANQIADLNDLDKDGVINA-RDLCAG 56
Query: 61 T--GIVVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
T G V G + + + F + +A L K+P+T I I
Sbjct: 57 TPIGAEVDNDGCETYLHKEEQYQLKILFDNDSALINQMFKNKIDELAAFLKKYPTTSIEI 116
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
Q + +G + NL +S+ RA+ +++ LI++G+ +R +++ F + +V
Sbjct: 117 QGYASKVGRAEYNLNLSRHRAENVRNLLIEKGIPGDR-LAIIAFGDTQLAEPGMDRVSHA 175
Query: 174 NNQRIEIQIFPRGNIKK 190
N+R+ + + + K
Sbjct: 176 LNRRVTATVVGQQGMVK 192
>gi|86142769|ref|ZP_01061208.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
gi|85830801|gb|EAQ49259.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
Length = 622
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 5/128 (3%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + V+ + + + + L + ++ K+P + + SHTD
Sbjct: 495 EDIVAVNDRNQLTQVKLEKIYFDFDKANIRPDAATTLDKLVALMKKYPEMNVEVASHTDQ 554
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND----TKVGRQNN 175
G NL +SQ RA Y++ +G+ +R + +G+ + PI+ T+ N
Sbjct: 555 RGPEDYNLQLSQRRAQSTVDYIVSKGIDRSR-LKAQGYGEQDPINACPSGDCTEEQFDEN 613
Query: 176 QRIEIQIF 183
+R E I
Sbjct: 614 RRSEFTIL 621
>gi|229013711|ref|ZP_04170840.1| OmpA/MotB domain protein [Bacillus mycoides DSM 2048]
gi|228747633|gb|EEL97507.1| OmpA/MotB domain protein [Bacillus mycoides DSM 2048]
Length = 234
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L + + KK ++ + + K + + + +
Sbjct: 55 LSANSLEAEQAKKQAEDRAKE-KKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLML 113
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++ +L I + HTD++ +N +
Sbjct: 114 TILENVLFDSGKADVKLESLGIAKEMSNLLVSASPREITVSGHTDTVPIANAQFASNWEL 173
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT G+ N+R+E+ I P
Sbjct: 174 STQRAVNFMQVLLQNKELQPEKFSAVGYGEYRSIAPNDTPEGKAKNRRVEVFILP 228
>gi|253701760|ref|YP_003022949.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251776610|gb|ACT19191.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 486
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ V + K+L ++ IA +L P + ++ HTD+ G L++NL +S RA+ +
Sbjct: 377 TVLFAVDSSDVSPKYLGQIKKIADLLKANPGSTALVEGHTDNTGALRDNLKLSLRRAENL 436
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR----IEIQI 182
K + R R ++V+G P+ +N T+ GRQ N+R +++QI
Sbjct: 437 KR-ALVRYGVDPRLLAVKGEGSLQPVASNATEQGRQKNRRAVTKVQVQI 484
>gi|189346280|ref|YP_001942809.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245]
gi|189340427|gb|ACD89830.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245]
Length = 169
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 57/183 (31%), Gaps = 16/183 (8%)
Query: 1 MIKEL-GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + GL + M +GC S S+ + GS F
Sbjct: 1 MKTGIKGLVIIAMIATAGCSSKSAVTSADSGADSSSSMQGGSSSGSVSSSGSYGFDEWQT 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ L + L A L + I+ H D
Sbjct: 61 GP--------------LGDVFFDYDSSILATEAQNRLTQNAAWLKSNAGKSVVIEGHCDD 106
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N+ + + RA K ++ + GVS++R +V + + P D + N+R
Sbjct: 107 RGTSEYNIALGERRAVTAKEFIARLGVSASRLETVT-YGEERPFDKGQNEEAWAKNRRAH 165
Query: 180 IQI 182
+
Sbjct: 166 FVV 168
>gi|162452025|ref|YP_001614392.1| hypothetical protein sce3752 [Sorangium cellulosum 'So ce 56']
gi|161162607|emb|CAN93912.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
Length = 207
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 74 CYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVI-AIQSHTDSIGTLKNNLLISQ 131
+P V F + L + +L L+ L + + ++ HTDS G N +S+
Sbjct: 73 VSLPGPVVFETNSDKLLPESDEVLNLVDEFLKQREDVSLLRVEGHTDSDGEDAANQTLSE 132
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+RA + +L+ +G RFI+V GF P+ N+T G+ N+R I
Sbjct: 133 KRAMAVARWLVAKGNDCKRFIAV-GFGETKPVADNNTPEGKAQNRRTGFFI 182
>gi|266621919|ref|ZP_06114854.1| putative flagellar motor protein MotB [Clostridium hathewayi DSM
13479]
gi|288866392|gb|EFC98690.1| putative flagellar motor protein MotB [Clostridium hathewayi DSM
13479]
Length = 283
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 6/169 (3%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM--QLQDTGIVVSRIGDMITCYIPV 78
A + + + ++ + Q Q+++ VVS + +
Sbjct: 77 AGAPEGEGSQFNTGTGGGARSASSLAMADMAKDIQSYFQMENLDAVVSDSENAVYIRFKN 136
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI---SQERA 134
+ F L++ ML + +L ++AI + + + + S ERA
Sbjct: 137 DLLFAPDSAVLQENSKSMLDALGIMLKDRQDEIMAIYINGHTAQAANSLINDRLLSSERA 196
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
D + YL + + RG+ YPI N TK GR+ N+R+++ I
Sbjct: 197 DNVAIYLEDHVGLEPKKLICRGYGKYYPIADNSTKEGRELNRRVDMIIL 245
>gi|167614763|ref|ZP_02383398.1| unnamed protein product; Similar to putative exported protein
[Burkholderia thailandensis Bt4]
Length = 560
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 65 VSRIGDMITCYIPVHVSF-VSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
VS G+ + F + LQ ++ P + I H+DS G+
Sbjct: 427 VSPRGESTAMQLDTVTLFATGQATFSPGAAQRELQHALRMILANPEQRVLIVGHSDSAGS 486
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NL +S+ RA I+ + + +GV RFI V+G +P+ N + +GR N+R+EI +
Sbjct: 487 DAVNLQLSKARARAIRDWFVDQGVLKTRFI-VQGAGDTHPVADNASPLGRAQNRRVEILL 545
Query: 183 FP 184
P
Sbjct: 546 IP 547
>gi|46447485|ref|YP_008850.1| peptidoglycan-associated lipoprotein precursor (pal) [Candidatus
Protochlamydia amoebophila UWE25]
gi|46401126|emb|CAF24575.1| probable peptidoglycan-associated lipoprotein precursor (pal)
[Candidatus Protochlamydia amoebophila UWE25]
Length = 246
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 57/145 (39%), Gaps = 7/145 (4%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITC-----YIPVHVSFVSEVFLEKKF-LPMLQLIA 100
L + E ++ + + D ++ + L + IA
Sbjct: 103 LARQPRETPGEIGSSIPSIESFQDPCMIPQLAAIFKTIYFDYDSSMIKGQANLQTIHQIA 162
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ + P+ I I+ HTD G NL + R++ +++ LI V+ + ++ + +
Sbjct: 163 DFMRRHPNVYIFIEGHTDERGPQAYNLALGSRRSNAVRNLLISEDVNPDNLFTIS-YGKE 221
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPR 185
P+ + G N+R+E +I+ R
Sbjct: 222 RPVVLEKHEEGWSRNRRVEFKIYER 246
>gi|330964668|gb|EGH64928.1| flagellar motor protein MotD [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 295
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 60/170 (35%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K + + + D F ++ + V I + + F
Sbjct: 84 KDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSLLFVSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K +++ ++ I+ +F I ++ TD N +S RA I
Sbjct: 144 DAMPSDKAFTIIEKVSGIVKRF-DNPIHVEGFTDDQPISTAQFPTNWELSSARAASIVRM 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L G++ R SV G+ PI N T GR N+R+ + I +++
Sbjct: 203 LAMDGINPARLASV-GYGEFQPIAPNTTAAGRAKNRRVVLVISRNLEVRR 251
>gi|331006559|ref|ZP_08329851.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC1989]
gi|330419628|gb|EGG94002.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC1989]
Length = 325
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 7/146 (4%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFL-EKKFLPMLQLIA 100
+ + ++ + Q+ I + G I I SF S + + ++ I
Sbjct: 139 ETQNDARELANDLREQIVAGEIEIETDGRKIIVRIREKGSFQSGSHIMNDDYYDVMDDIR 198
Query: 101 TILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ P I +Q HTD+I ++N +S RA + + G R V G
Sbjct: 199 EAVLTKPG-KIQVQGHTDNIPIRSARYRSNWELSTARAVSVAQ-ALMDGDVDPRRFEVSG 256
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
FA + N+++ R N+R+EI I
Sbjct: 257 FADTQSLVDNNSEENRSRNRRVEIVI 282
>gi|302874600|ref|YP_003843233.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|307690789|ref|ZP_07633235.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|302577457|gb|ADL51469.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B]
Length = 236
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 6/172 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ +V + ++ + + + +++ I + +
Sbjct: 67 KNPEGEVPIVGEETPQKDAEKSVDLYSQIQQLIDKNTLQGQVKLTKDERGINIELNEKIL 126
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI---GTLKNNLLISQERADVI 137
F + ++ F L I+ I+ + I I+ HTD++ G KNN +S RA+ +
Sbjct: 127 FDSGKAEIKTDFATTLNKISEIIASIGNL-IEIEGHTDNVPISGVYKNNRDLSYARANSV 185
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
Y RG+S NR ++ + + YPI ND+ R N+R+ I I G+ K
Sbjct: 186 LEYFASRGISQNRMVT-KAYGEWYPIKPNDSDANRAENRRVNILIVVPGDNK 236
>gi|283956854|ref|ZP_06374327.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni 1336]
gi|283791580|gb|EFC30376.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni 1336]
Length = 319
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ G T + H F + + F ++ IA +L++ ++ HTD+I
Sbjct: 197 EGALLDENGCEKTISLEGHFGF-DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI 255
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ N +S+ RA + + +++ I G+ P +NDTK GR +N+R++
Sbjct: 256 GSRAYNQKLSERRAKSVANE-LEKYGVEKSRIKTVGYGQDNPRSSNDTKEGRADNRRVD 313
>gi|262401486|ref|ZP_06078054.1| outer membrane protein A precursor [Vibrio sp. RC586]
gi|262352307|gb|EEZ01435.1| outer membrane protein A precursor [Vibrio sp. RC586]
Length = 109
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ V ++F+ L I+++L +P + HTDS G+ N IS+ RA + +
Sbjct: 1 MFGFDSVEPSQEFIDQLTEISSVLISYPQAQAKVVGHTDSTGSALYNQNISEHRAQAVVN 60
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
LI+ + + RG P+ N+T GR N+R+EI I
Sbjct: 61 KLIEL-GVTPTQLEWRGEGEFQPVADNNTAEGRAANRRVEITI 102
>gi|157415702|ref|YP_001482958.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
81116]
gi|157386666|gb|ABV52981.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni 81116]
gi|307748343|gb|ADN91613.1| Outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni M1]
gi|315930990|gb|EFV09965.1| oprF membrane domain protein [Campylobacter jejuni subsp. jejuni
327]
Length = 319
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ G T + H F + + F ++ IA +L++ ++ HTD+I
Sbjct: 197 EGALLDENGCEKTISLEGHFGF-DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI 255
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ N +S+ RA + + +++ I G+ P +NDTK GR +N+R++
Sbjct: 256 GSRAYNQKLSERRAKSVANE-LEKYGVEKSRIKTVGYGQDNPRSSNDTKEGRADNRRVD 313
>gi|148925647|ref|ZP_01809335.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni CG8486]
gi|145845657|gb|EDK22748.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni CG8486]
Length = 319
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ G T + H F + + F ++ IA +L++ ++ HTD+I
Sbjct: 197 EGALLDENGCEKTISLEGHFGF-DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI 255
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ N +S+ RA + + +++ I G+ P +NDTK GR +N+R++
Sbjct: 256 GSRAYNQKLSERRAKSVANE-LEKYGVEKSRIKTVGYGQDNPRSSNDTKEGRADNRRVD 313
>gi|57238501|ref|YP_179632.1| fibronectin-binding protein [Campylobacter jejuni RM1221]
gi|57167305|gb|AAW36084.1| fibronectin-binding protein [Campylobacter jejuni RM1221]
gi|315058932|gb|ADT73261.1| Outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni S3]
Length = 319
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ G T + H F + + F ++ IA +L++ ++ HTD+I
Sbjct: 197 EGALLDENGCEKTISLEGHFGF-DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI 255
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ N +S+ RA + + +++ I G+ P +NDTK GR +N+R++
Sbjct: 256 GSRAYNQKLSERRAKSVANE-LEKYGVEKSRIKTVGYGQDNPRSSNDTKEGRADNRRVD 313
>gi|121612147|ref|YP_001001127.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
81-176]
gi|167006020|ref|ZP_02271778.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
81-176]
gi|87249779|gb|EAQ72738.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
81-176]
Length = 319
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ G T + H F + + F ++ IA +L++ ++ HTD+I
Sbjct: 197 EGALLDENGCEKTISLEGHFGF-DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI 255
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ N +S+ RA + + +++ I G+ P +NDTK GR +N+R++
Sbjct: 256 GSRAYNQKLSERRAKSVANE-LEKYGVEKSRIKTVGYGQDNPRSSNDTKEGRADNRRVD 313
>gi|86152850|ref|ZP_01071055.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni HB93-13]
gi|85843735|gb|EAQ60945.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni HB93-13]
Length = 319
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ G T + H F + + F ++ IA +L++ ++ HTD+I
Sbjct: 197 EGALLDENGCEKTISLEGHFGF-DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI 255
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ N +S+ RA + + +++ I G+ P +NDTK GR +N+R++
Sbjct: 256 GSRAYNQKLSERRAKSVANE-LEKYGVEKSRIKTVGYGQDNPRSSNDTKEGRADNRRVD 313
>gi|86149287|ref|ZP_01067518.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|86152031|ref|ZP_01070244.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|88596498|ref|ZP_01099735.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
84-25]
gi|205356091|ref|ZP_03222858.1| outer membrane fibronectin binding protein [Campylobacter jejuni
subsp. jejuni CG8421]
gi|218563079|ref|YP_002344858.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|85840069|gb|EAQ57327.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|85841139|gb|EAQ58388.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|88191339|gb|EAQ95311.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360785|emb|CAL35585.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|205345934|gb|EDZ32570.1| outer membrane fibronectin binding protein [Campylobacter jejuni
subsp. jejuni CG8421]
gi|284926685|gb|ADC29037.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni IA3902]
gi|315927426|gb|EFV06764.1| oprF membrane domain protein [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315930550|gb|EFV09590.1| oprF membrane domain protein [Campylobacter jejuni subsp. jejuni
305]
Length = 319
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ G T + H F + + F ++ IA +L++ ++ HTD+I
Sbjct: 197 EGALLDENGCEKTISLEGHFGF-DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI 255
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ N +S+ RA + + +++ I G+ P +NDTK GR +N+R++
Sbjct: 256 GSRAYNQKLSERRAKSVANE-LEKYGVEKSRIKTVGYGQDNPRSSNDTKEGRADNRRVD 313
>gi|326942295|gb|AEA18191.1| flagellar motor protein MotB [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 262
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 67/175 (38%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L + + KK ++ + + K + + + +
Sbjct: 83 LSASSLEAEQAKKQEEARAKE-KKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 141
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I ++ F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 142 TILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWEL 201
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 202 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 256
>gi|313105860|ref|ZP_07792123.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa 39016]
gi|310878625|gb|EFQ37219.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa 39016]
Length = 169
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 18/165 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + +N N +G+ + S + I
Sbjct: 22 GCSSKGGD---ASGEGANGGVDPNAGYGA-------------NSGAVDGSLSDEAALRAI 65
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + ++ HTD GT + N+ + + RA
Sbjct: 66 TTFYFEYDSSDLKPEAMRALDVHAKDLKG-SGQRVVLEGHTDERGTREYNMALGERRAKA 124
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+ + S + + + + P+ T + N+R+E++
Sbjct: 125 VQRYLVLQ-GVSPAQLELVSYGKERPVATGHDEQSWAQNRRVELK 168
>gi|260576491|ref|ZP_05844481.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259021374|gb|EEW24680.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 464
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 62/185 (33%), Gaps = 17/185 (9%)
Query: 16 SGCGLASREKKKVFLHKSNDTD---IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
S + E+++ ++ + + + + E L V +GD
Sbjct: 282 SALAQVASEQRRRADLEAAEAERLRAEAQDLAKFRSEFFGELSKVLAGRQ-GVRIVGDRF 340
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDS-----I 120
+ L + + + LN+ +I + HTD+
Sbjct: 341 VFS-SEVLFNPGSADLAPEGRAQIAGVVATLNEIAAQIPPGIDWIIRVDGHTDNVPLSGQ 399
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G +N +SQ RA + Y+ S ++ GF P+ D R N+RIE+
Sbjct: 400 GEFADNWELSQARALAVVRYMQDNLGFSPERLAATGFGEYQPVAVGDAPETRALNRRIEL 459
Query: 181 QIFPR 185
++ R
Sbjct: 460 KLTER 464
>gi|238023638|ref|YP_002907870.1| hypothetical protein bglu_2g01470 [Burkholderia glumae BGR1]
gi|237878303|gb|ACR30635.1| OmpA/MotB [Burkholderia glumae BGR1]
Length = 438
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V F + + + P+L +A + + +
Sbjct: 305 LKDEIARGELTVDEDARHSKVVFRGDTMFVTGKSRVRPELEPVLAKVAREVARVGG-RVI 363
Query: 113 IQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ +TDS SQ+RA + L G S R +S+ G P+ N T
Sbjct: 364 VTGYTDSQPIHTREFPDNLVLSQKRAAFVADVLKAHGTPSERIVSI-GKGDAQPVADNAT 422
Query: 169 KVGRQNNQRIEIQIF 183
GR N+R+E+ +
Sbjct: 423 PQGRSRNRRVEVLVV 437
>gi|189500639|ref|YP_001960109.1| peptidoglycan-associated lipoprotein [Chlorobium phaeobacteroides
BS1]
gi|189496080|gb|ACE04628.1| peptidoglycan-associated lipoprotein [Chlorobium phaeobacteroides
BS1]
Length = 158
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 66/174 (37%), Gaps = 22/174 (12%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
+ + +SGCG S E S D S+L +
Sbjct: 6 VIVAFAVSGCGSKSSETALDTNSGSEQYDSSGSDSASALLEEARRM-------------- 51
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ LE + L+ A LN+ + I+ H D GT + N+
Sbjct: 52 -------VKDVFFQYDSAELEPVAVSQLKNNAEWLNQNRTISAMIEGHCDERGTSEYNMA 104
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++RA+ KS+L++ GV+++R +V F + P D+ T+ N+R +
Sbjct: 105 LGEKRAETTKSFLVRAGVAASRLETVS-FGEERPFDSGHTEAAWSKNRRAHFVV 157
>gi|163732607|ref|ZP_02140052.1| OmpA family domain protein [Roseobacter litoralis Och 149]
gi|161393967|gb|EDQ18291.1| OmpA family domain protein [Roseobacter litoralis Och 149]
Length = 319
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 69/175 (39%), Gaps = 5/175 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
+ +S +S + ++ + IV + + E + D + +
Sbjct: 148 AVGILVSTTASSSYVQVVSIDENTDLSVIVPRERPAER---EPILAERNLDQSVQMLPQD 204
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
P + L P L+ ++ L+ IA+ HTD+ G L N+ +
Sbjct: 205 GRYVL--PGLAFAIGTSDLGPGPFPALKELSEFLSTTEGIRIALVGHTDTTGALATNISL 262
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S+ RA +++ LI+ + + G Y PI TN T GR+ N+R+E+ +
Sbjct: 263 SRARAQSVRARLIEVYGVAPDKVDAEGMGYLAPIATNLTDEGRRQNRRVEVVLLN 317
>gi|2251192|emb|CAA90573.1| outer membrane protein [Pseudomonas aeruginosa]
gi|162319694|gb|ABX84373.1| OprL [Pseudomonas aeruginosa]
Length = 168
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 18/165 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + +N N +G+ + S + I
Sbjct: 21 GCSSKGGD---ASGEGANGGVDPNAGYGA-------------NSGAVDGSLSDEAALRAI 64
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + ++ HTD GT + N+ + + RA
Sbjct: 65 TTFYFEYDSSDLKPEAMRALDVHAKDLKG-SGQRVVLEGHTDERGTREYNMALGERRAKA 123
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+ + S + + + + P+ T + N+R+E++
Sbjct: 124 VQRYLVLQ-GVSPATLELVSYGKERPVATGHDEQSWAQNRRVELK 167
>gi|330991879|ref|ZP_08315828.1| Outer membrane lipoprotein omp16 [Gluconacetobacter sp. SXCC-1]
gi|329760900|gb|EGG77395.1| Outer membrane lipoprotein omp16 [Gluconacetobacter sp. SXCC-1]
Length = 156
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 61/176 (34%), Gaps = 27/176 (15%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M +L + + ++ C + + T V GS D
Sbjct: 1 MKLKLLGAAGMALFLAACSDHADKNVNT----GAATQQVGPAPGSEAD------------ 44
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+V+ GD + + + L L A L K+P + I + D
Sbjct: 45 ---LVATAGDRVLFALK-------QSTLSSDAKAELDKQAAWLAKYPQVHVQIAGNCDDR 94
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
GT + N+ + + RA+ YL+ +GV ++R ++ + P D + N+
Sbjct: 95 GTEEYNIALGERRANAAHDYLVAKGVDASRMTTIS-YGKDRPTAVGDDEASWAQNR 149
>gi|42524036|ref|NP_969416.1| outer membrane protein [Bdellovibrio bacteriovorus HD100]
gi|39576244|emb|CAE80409.1| probable outer membrane protein [Bdellovibrio bacteriovorus HD100]
Length = 440
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 70/162 (43%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+S E++ + + + +L + QL+ V + +
Sbjct: 276 SSTEQELQTVQSEAERQRMELEKQQTLLNRAQALRSQLKPNEAEVFTENGKLMVRLKGLQ 335
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ L K +L+ + L + I+ HTD++G+ + N ++S++RA ++++
Sbjct: 336 FPTAQSNLGPKNQALLKKVEGALAGVTPKKVIIEGHTDNVGSAEANRILSEKRAQSVENF 395
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ +G + G Y P+ N+T GR N+RI++ I
Sbjct: 396 LVSQGTLPAEKVESVGMGYDNPVGNNNTAAGRAQNRRIDLVI 437
>gi|83941363|ref|ZP_00953825.1| flagellar motor protein [Sulfitobacter sp. EE-36]
gi|83847183|gb|EAP85058.1| flagellar motor protein [Sulfitobacter sp. EE-36]
Length = 582
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 62/185 (33%), Gaps = 14/185 (7%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
T ++ R + K+ + + K + + L V GD
Sbjct: 400 TALARVAAEERRRAKLEAAERARLEAETKNLEQYRSEFFGRLR-ALLGNQEGVRIEGDRF 458
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDSI----- 120
+ L + +A IL VI + HTD+
Sbjct: 459 VFS-SEVLFPPGAATLSADGRGEIAKVAGILRNIAADIPPEIDWVIRVDGHTDNQPLSGL 517
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G +N +SQ RA + Y+I + ++ GF P+ +T+ R N+RIE+
Sbjct: 518 GEFADNWELSQARALSVVKYMINFLGIAPERLAANGFGQYQPVARGNTEAARAQNRRIEL 577
Query: 181 QIFPR 185
++ R
Sbjct: 578 KLTER 582
>gi|229062194|ref|ZP_04199517.1| OmpA/MotB domain protein [Bacillus cereus AH603]
gi|229169237|ref|ZP_04296950.1| OmpA/MotB domain protein [Bacillus cereus AH621]
gi|228614220|gb|EEK71332.1| OmpA/MotB domain protein [Bacillus cereus AH621]
gi|228717088|gb|EEL68766.1| OmpA/MotB domain protein [Bacillus cereus AH603]
Length = 233
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 64/175 (36%), Gaps = 7/175 (4%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L S + KK ++ + + + + + +
Sbjct: 55 LSASSLESEKIKKDA--EAEVKKQEMNELKAVQKGIDKYIEEKQLSSSFKTDLTEKGLMV 112
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++ +L I + HTD++ +N +
Sbjct: 113 TILENVLFDSGKADVKLESLGIAKEMSNLLVSASPREITVSGHTDTVPIANAQFASNWEL 172
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT G+ N+R+E+ I P
Sbjct: 173 STQRAVNFMQVLLQNKDLQPEKFSAIGYGEYRSIAPNDTPEGKAKNRRVEVFILP 227
>gi|116620548|ref|YP_822704.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223710|gb|ABJ82419.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 262
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 3/172 (1%)
Query: 20 LASREKKKVFLHKSNDTDI---VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
A++E+ + D + ++ ++ L VVS I D
Sbjct: 70 SAAQERASSADQHAATADQHAGEAMTRANQANQLGEQNTQALNSLKSVVSNIDDYKLQTS 129
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ L L +A+ + IA++ +TD G+ N +S+ RAD
Sbjct: 130 VAVPFQFNKYNLSSDAKQDLDKLASDVKSDKRYFIAVEGYTDKTGSKAYNSALSRRRADA 189
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ YL+ + I + G + P+D + R N+R+E+++F +
Sbjct: 190 VVEYLVAQHDVPIYRIHMIGLGDEKPVDEAKNRAARAKNRRVEVKVFSADQV 241
>gi|261414609|ref|YP_003248292.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371065|gb|ACX73810.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327079|gb|ADL26280.1| putative peptidoglycan-associated lipoprotein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 192
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 5/186 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHK-SNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+ K + + GC E D D + + +L+
Sbjct: 4 VFKLALMGTAVALFAWGCSKEKPETDPQPQTAPEAPADSTLNLDALVADTLDADSLARLE 63
Query: 60 DTGIVVSR---IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ R + + L + +L +A IL ++ ++ H
Sbjct: 64 AERLEAERARLEELINRIMLEDVYFDYDRSELTENAKRLLAQVAEILVNENRFIVTVEGH 123
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD+ GT N+ + R+ V++ +LI GV +NR +SV + + P + N+
Sbjct: 124 TDARGTEDYNISLGARRSTVVREFLIAYGVDANRLVSVS-YGKERPKVQGTDETAYSKNR 182
Query: 177 RIEIQI 182
R ++
Sbjct: 183 RAHFRV 188
>gi|148546401|ref|YP_001266503.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148510459|gb|ABQ77319.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 239
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L LQ + LN T + + HTD +G+ N +S+ RA +
Sbjct: 136 VMFAFDSAELTLAAQQRLQGLVAKLNSPTVTKVRVIGHTDGVGSDSYNQALSERRASSVA 195
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YLI + ++ +G P+ N+T+ GR N+R+E+ +
Sbjct: 196 EYLIGQ-GLEMGKVTSQGRGESEPVTDNETEEGRARNRRVELHL 238
>gi|260219497|emb|CBA26342.1| Peptidoglycan-associated lipoprotein [Curvibacter putative symbiont
of Hydra magnipapillata]
Length = 167
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 62/166 (37%), Gaps = 2/166 (1%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S CG A + K KS T + D A + + + + ++
Sbjct: 1 MSACGSAVKLDKVPVEDKSGQTVNAGSAATGTNDGAGVA-KSNVATVTLDKNAQDPALSA 59
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + +F L+ A L S ++I+ HTD G + NL + Q+RA
Sbjct: 60 ALKTVYFDYDSFVIRSEFQATLEAHAKYLKADKSRKVSIEGHTDERGGREYNLALGQKRA 119
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ + +Q S+ + + + P +++ + N+R E
Sbjct: 120 EAV-RKALQLQGVSDAQMEAISYGKEKPAVLGNSEAALEKNRRAEF 164
>gi|224369398|ref|YP_002603562.1| ExeA2 [Desulfobacterium autotrophicum HRM2]
gi|223692115|gb|ACN15398.1| ExeA2 [Desulfobacterium autotrophicum HRM2]
Length = 555
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + L L A L P ++++ +TD+ G N+ +S+ RA+++KS+
Sbjct: 452 FGYNNNDFTDQALKDLTKFAGSLVAHPGAKVSVKGYTDANGNQTYNIKLSEFRANIVKSF 511
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L+ R + I +G + PI TNDT GR N+R+EI++ +
Sbjct: 512 LLGR-GARLDQIKTQGMGSENPIATNDTAQGRMMNRRVEIEVISK 555
>gi|120599218|ref|YP_963792.1| OmpA domain-containing protein [Shewanella sp. W3-18-1]
gi|146292708|ref|YP_001183132.1| OmpA domain-containing protein [Shewanella putrefaciens CN-32]
gi|120559311|gb|ABM25238.1| OmpA domain protein [Shewanella sp. W3-18-1]
gi|145564398|gb|ABP75333.1| OmpA domain protein [Shewanella putrefaciens CN-32]
gi|319426012|gb|ADV54086.1| peptidoglycan-associated lipoprotein [Shewanella putrefaciens 200]
Length = 178
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 63/178 (35%), Gaps = 8/178 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + IS C S E + + +N + G + Q
Sbjct: 8 KAMLVALPIMAISACSSTS-ESETDAMGSTNGSGSGLNGGGVQTGGIGGMLSPEEQQRQQ 66
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + I ++ +F +L+ T L + PS + I+ H D GT
Sbjct: 67 LEELRREHII------YFDFDRSEVQTEFAAILEAHGTYLVEHPSVRVLIEGHADERGTP 120
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA + +Q +SV + + P+D + T G N+R +
Sbjct: 121 EYNIALGERRAKAVAK-YLQGMGVQPSQMSVVSYGEEKPLDFSRTDEGFGKNRRAVLV 177
>gi|23015570|ref|ZP_00055342.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 161
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 1/119 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+GIV D + + L L A L +P+ + ++ H D
Sbjct: 38 ASSGIVKGSKEDFVANVGDRVFFDFDKSSLRADAKATLDKQAAWLKAYPNYSLTVEGHAD 97
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + NL + ++RA+ + YL GV++ R +V + + P+ + N+R
Sbjct: 98 ERGTREYNLALGEKRANSVAEYLKAAGVAAARVKTVS-YGKERPVALGSNEAAWSQNRR 155
>gi|330880603|gb|EGH14752.1| flagellar motor protein MotD [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 262
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K + + + D F ++ + V I + + FVS
Sbjct: 51 KDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSLLFVSG 110
Query: 86 VFLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ +++ ++ I+ +F I ++ TD N +S R+ I
Sbjct: 111 DAIPSDKAFTIIEKVSGIVKRF-DNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVRM 169
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV+ R SV G+ PI N T GR N+R+ + I ++++
Sbjct: 170 LAMDGVNPARLASV-GYGEFQPIAPNTTAAGRAKNRRVVLVISRNLDVRR 218
>gi|149276390|ref|ZP_01882534.1| possible outer membrane protein [Pedobacter sp. BAL39]
gi|149232910|gb|EDM38285.1| possible outer membrane protein [Pedobacter sp. BAL39]
Length = 620
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ ++ L + + L + +L P+ + IQ HTD++G + N +S RA
Sbjct: 512 LKNIFFDTNDFKLLPESVSELSTLLNLLKSNPNVQMEIQGHTDNVGNDQLNEQLSLNRAK 571
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ YL+ + R + +G+ K P+ NDT+ R+ N+R I
Sbjct: 572 AVYEYLLDNQIDPQR-LQYKGYGAKKPVVANDTEDNRRLNRRTSFVIT 618
>gi|170750721|ref|YP_001756981.1| peptidoglycan-associated lipoprotein [Methylobacterium
radiotolerans JCM 2831]
gi|170657243|gb|ACB26298.1| peptidoglycan-associated lipoprotein [Methylobacterium
radiotolerans JCM 2831]
Length = 164
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 2/124 (1%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G I V F S+ L L A L ++P I+ H D
Sbjct: 36 GAGAATPGSAQDFVVNIGDRVFFESDSTDLTPTATATLDKQAAWLQRYPRYTFIIEGHAD 95
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N + RA + YL RG++++R +V + + P+ + N+R
Sbjct: 96 ERGTREYNFSLGARRAQAVNDYLATRGIAASRMRTVS-YGKERPVAVCNDISCWSQNRRA 154
Query: 179 EIQI 182
I +
Sbjct: 155 VIVL 158
>gi|326329962|ref|ZP_08196276.1| outer membrane porin OprF [Nocardioidaceae bacterium Broad-1]
gi|325952170|gb|EGD44196.1| outer membrane porin OprF [Nocardioidaceae bacterium Broad-1]
Length = 253
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 49/161 (30%), Gaps = 5/161 (3%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC-YIPVHVSFV 83
+ + + +E + T R
Sbjct: 97 TGEDGSGTDAVGGDSEAEATTEPEPSEPAVTAEASPTPTAEEREAAQAELDRFRSIGFEH 156
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L L +++ +A L + P + I+ H D G L + +S+ RA + L+
Sbjct: 157 NSDVLTGDGLGVVKALAATLTEHPDVTVRIEGHADITGMLAHTQDLSERRAKRVLDTLVG 216
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S +G+ PI G N+R+E I
Sbjct: 217 L-GVEADRLSSKGYGETRPIVPGKPDPG---NRRVEFVITN 253
>gi|325281257|ref|YP_004253799.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
20712]
gi|324313066|gb|ADY33619.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
Length = 276
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 6/158 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKK 91
+ D N R S L+ +D + V+ I + + F + K+
Sbjct: 111 QAEVDAQNARLQSLLNSVKDALLG-FSSDELTVTEKNGKIYVAMSDKLLFESGSAQVNKQ 169
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVS 147
L +A +L K + I+ HTD+ K+N +S RA + L +
Sbjct: 170 GKEALGKLAEVLKKQHDIDVFIEGHTDNKPIKTVQFKDNWDLSVVRATSVVRILTKDYGV 229
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ I G P+D N++ GR +N+R EI + P+
Sbjct: 230 NPLQILPCGRGEFMPVDNNESVEGRAHNRRTEIIMAPK 267
>gi|215433411|gb|ACJ66671.1| OmpA domain protein [Myxococcus fulvus HW-1]
Length = 615
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS-HTDSIGTL 123
V D + ++ ++K+ +L +A ++ + P + + HTD G
Sbjct: 486 VEIRPDRFVV-MGKVFFEPTQARIQKRSFELLDWVARVIREHPEIPLVVVGAHTDDRGFP 544
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +SQ RA+ ++ YLI R ++ R + G+ + PID+N T GR+NN+R+E +
Sbjct: 545 DANRRLSQARAEAVRQYLIGRDIAPER-LKALGYGQERPIDSNATSNGRENNRRVEFLL 602
>gi|218899667|ref|YP_002448078.1| chemotaxis protein MotB [Bacillus cereus G9842]
gi|218542530|gb|ACK94924.1| chemotaxis protein MotB [Bacillus cereus G9842]
Length = 262
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 67/175 (38%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L + + KK ++ + + K + + + +
Sbjct: 83 LSASSLEAEQAKKQEEARAKE-KKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 141
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I ++ F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 142 TILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWEL 201
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 202 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 256
>gi|94264345|ref|ZP_01288137.1| OmpA/MotB [delta proteobacterium MLMS-1]
gi|93455239|gb|EAT05452.1| OmpA/MotB [delta proteobacterium MLMS-1]
Length = 240
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 9/164 (5%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQ---MQLQDTGIVVSRIGDMITCYIPVHVSF-V 83
V + + GS A+ G +VS T + ++F
Sbjct: 71 VSADPAPPPTVATGHPGSGEGTAQGLLSHYFSDFARDGFMVSGNVGQFTLTLEEKLAFAS 130
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKS 139
+ LP+L+ +A +L P+ + I H+D + +N +S RA +
Sbjct: 131 GRAEPREPSLPILERLAELLAGKPAYRVVIAGHSDDLPISSERYPSNWYLSSARAVAVAE 190
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
YL Q+GV R ++ +G A P ND+ R N+R+EI +
Sbjct: 191 YLQQQGVDPGR-LTTQGHAEFKPRVANDSPQNRAKNRRVEITLL 233
>gi|167905004|ref|ZP_02492209.1| OmpA family protein [Burkholderia pseudomallei NCTC 13177]
Length = 524
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 78 VHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + + LQ ++ P + I H DS G+ N +S+ RA
Sbjct: 405 VSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARA 464
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
I+ + + +GV RFI V+G +PI ND+ GR N+R+E+ + P
Sbjct: 465 IRDWFVDQGVLKTRFI-VQGAGDTHPIADNDSSSGRAQNRRVEVLLIP 511
>gi|157736518|ref|YP_001489201.1| OmpA domain-containing protein [Arcobacter butzleri RM4018]
gi|315635678|ref|ZP_07890941.1| OmpA domain protein [Arcobacter butzleri JV22]
gi|157698372|gb|ABV66532.1| OmpA domain protein [Arcobacter butzleri RM4018]
gi|315479975|gb|EFU70645.1| OmpA domain protein [Arcobacter butzleri JV22]
Length = 241
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 84/231 (36%), Gaps = 47/231 (20%)
Query: 2 IKELGLSMFIMTTISGCGLASR----EKKKVFLHKSNDTDIVN----------------- 40
K L S I + + GC + + + + + I
Sbjct: 6 FKFLLSSTIIASLLVGCAQKTGYQTYDNNQNAIIGTTLGAIAGIVLGNNIGGGNKGRNKV 65
Query: 41 ----------KRFGSSLDKAEDEFQMQLQ-------------DTGIVVSRIGDMITCYIP 77
G S+DK E L + ++VS + +
Sbjct: 66 IGAVAGAAIGGAIGYSMDKQAQEVAQSLNTNVNNNPQAVLDPNQDLIVSNTDNYVKIMFR 125
Query: 78 VHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ F + + I ++L K+P+T++ + HTDS GT N +S++RA
Sbjct: 126 DSMMFETNSANPTYSAQTKISKIYSVLQKYPNTLVQVVGHTDSRGTHTYNQTLSEQRATN 185
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ + +I SN+ S RG ++ P+ N+++ N+R+E+ ++P
Sbjct: 186 VGN-IIYNSGVSNQIFS-RGCSFDKPVALNNSESNMALNRRVEVYLYPNQE 234
>gi|171915499|ref|ZP_02930969.1| OmpA/MotB domain protein [Verrucomicrobium spinosum DSM 4136]
Length = 355
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L + L + ++ K P++ I+ HTD+IG+ + NL +SQ RA+ +
Sbjct: 243 DLLFEYGSDQLAENARLSLMKLGYLITKNPNSRFIIEGHTDTIGSAEFNLDLSQRRANAV 302
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPID---TNDTKVGRQNNQRIEIQIFP 184
+LI+ SN I G P+ N TK + N+R+EI++ P
Sbjct: 303 VGWLIRSLRLSNDRIDAVGMGESRPLARVNPNGTKEEQALNRRVEIKVRP 352
>gi|170734971|ref|YP_001774085.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169821009|gb|ACA95590.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 220
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 62/219 (28%), Gaps = 39/219 (17%)
Query: 2 IKELGLSMFIMTT-ISGCGLASR--------EKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
+K + L + ++ C AS + + D + + + A
Sbjct: 1 MKNIHLVLLASVVSLAACSSASGPTYNAYELQSRNGIRTFQVDCHGILSTAKTCMKVATR 60
Query: 53 EFQMQ---LQDTGIVVSRIGDMITCYIP--------------------------VHVSFV 83
+ L DT D +
Sbjct: 61 MCGNEPVRLVDTTTPYRDGADPHSIVFQCGAAPAPAAAAVAPAPAPAEKVSLTGDAYFAT 120
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L L + + + +TD+ G+ +N +S+ RAD + + ++
Sbjct: 121 DSAVLTPAATAALDTLLNQQADRHFARVEVDGYTDATGSDAHNQALSKRRADAV-AGYLR 179
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G P +NDT GR N+R+EI +
Sbjct: 180 EHGLKADSFAAAGHGEANPAASNDTAEGRARNRRVEISL 218
>gi|28900810|ref|NP_800465.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
2210633]
gi|28809256|dbj|BAC62298.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
2210633]
Length = 215
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 76/197 (38%), Gaps = 12/197 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L +++ ++ ++ + ++ + + D + +
Sbjct: 11 MKKNLLITLALIIM---SHHSAYAQDELTYIPIPKANQIADLNDLDKDGVINA-RDLCAG 66
Query: 61 T--GIVVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
T G V G + + + F + +A L K+P+T I I
Sbjct: 67 TPIGAEVDNDGCETYLHKEEQYQLKILFDNDSALINQMFKNKIDELAAFLKKYPTTSIEI 126
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
Q + +G + NL +S+ RA+ +++ LI++G+ +R +++ F + +V
Sbjct: 127 QGYASKVGRAEYNLNLSRHRAENVRNLLIEKGIPGDR-LAIIAFGDTQLAEPGMDRVSHA 185
Query: 174 NNQRIEIQIFPRGNIKK 190
N+R+ + + + K
Sbjct: 186 LNRRVTATVVGQQGMVK 202
>gi|88705612|ref|ZP_01103322.1| conserved hypothetical protein, secreted [Congregibacter litoralis
KT71]
gi|88700125|gb|EAQ97234.1| conserved hypothetical protein, secreted [Congregibacter litoralis
KT71]
Length = 181
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 64/186 (34%), Gaps = 11/186 (5%)
Query: 2 IKELGLS------MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+K++ ++ +F + C S ++++ + + +AE + Q
Sbjct: 1 MKQIPVAGKALTLLFAAMFLVACSGTSTKEEEAAAAAAAAAAAEQAAAADAAREAERQAQ 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + + V L + +L + +
Sbjct: 61 AAAAEAQRQMEQAA---MAAGTVFYFEFDSATLTPAAQAAVDAHIALLKTN-DRSVRLDG 116
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD GT N+ + + RA+ ++ Y++ ++ I + + P+ + N
Sbjct: 117 HTDERGTRDYNMALGERRANAVRDYMVVN-GVASYRIETVSYGEEQPVAYGSGESSWSQN 175
Query: 176 QRIEIQ 181
+R+E++
Sbjct: 176 RRVELK 181
>gi|260886728|ref|ZP_05897991.1| chemotaxis protein MotB [Selenomonas sputigena ATCC 35185]
gi|330839448|ref|YP_004414028.1| OmpA/MotB domain protein [Selenomonas sputigena ATCC 35185]
gi|260863580|gb|EEX78080.1| chemotaxis protein MotB [Selenomonas sputigena ATCC 35185]
gi|329747212|gb|AEC00569.1| OmpA/MotB domain protein [Selenomonas sputigena ATCC 35185]
Length = 303
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 69/218 (31%), Gaps = 42/218 (19%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR----------------------- 42
+++ + T I+ +++ + K+ T N
Sbjct: 25 LMTLLLATFIALYAMSATDSSKMAQMAQAFTAAFNTGGPSFFSQMGPSESRHAERVATED 84
Query: 43 --------FGSSLDKAEDEFQMQLQDTGIVVS----RIGDMITCYIPVHVSFV-SEVFLE 89
+L++ + E ++ G+ D + I F L
Sbjct: 85 KGNSAYIQEAKALEEVQKELDNYIKQNGLQGELNTTMTDDGLMIRIKEKALFPSGSAELV 144
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI-----SQERADVIKSYLIQR 144
+ + ++A +L K P + I HTD++ SQ + +K
Sbjct: 145 GEAQKIGPVVAGLLAKIPE-RVVISGHTDNVPIATARYPSNWELSSQRALNFMKFLFASN 203
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ S G++ PI N T GR N+R+E+ I
Sbjct: 204 TSLNPARFSSIGYSEYRPIADNKTDEGRSQNRRVEVLI 241
>gi|239908944|ref|YP_002955686.1| putative outer membrane protein [Desulfovibrio magneticus RS-1]
gi|239798811|dbj|BAH77800.1| putative outer membrane protein [Desulfovibrio magneticus RS-1]
Length = 345
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ +F+P+L+ I+ + ++ HTDSIGT + N+ + Q
Sbjct: 234 IVVFRSIYFDFDKYNIKPEFVPVLEEGTAIIKSKTGMKVILEGHTDSIGTEQYNMKLGQR 293
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RAD +K++ +++G+ ++R ++ F P+ TN T GR N+R I+
Sbjct: 294 RADSVKAFFVKKGIDASRIETIS-FGESDPVATNKTAQGRALNRRCVIK 341
>gi|317152528|ref|YP_004120576.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316942779|gb|ADU61830.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 352
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 10/168 (5%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
+S C + + D T +
Sbjct: 193 ALSSC---------TVVADYTSLTAPGAMDQYARDVFYSNVADAPVVTPVAAPVDTMGKE 243
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + +P+L+ IL++ PS I HTDS G N +S+ R
Sbjct: 244 TITFSLHFGFDKYQITDEMIPVLEQAKIILDENPSASYIIAGHTDSTGPDAYNQGLSERR 303
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
A ++ +++ GV+++R S +G+ P N T GR+ N+R+EIQ
Sbjct: 304 AGSVREWMVANGVNTSRLES-KGYGELSPKYDNATSEGRKLNRRVEIQ 350
>gi|307944419|ref|ZP_07659759.1| outer membrane porin F [Roseibium sp. TrichSKD4]
gi|307772168|gb|EFO31389.1| outer membrane porin F [Roseibium sp. TrichSKD4]
Length = 164
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 73/182 (40%), Gaps = 34/182 (18%)
Query: 2 IKELGLSMFIMTTISGCGLASR-EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++ L +++ + ++ C + + + ++ G S+
Sbjct: 1 MRTLVVTIVMCGVLAACSSVGGFGQAGSSKPSAGSIEAFSENIGRSI------------- 47
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ L++ +L AT L +P+ ++ IQ H D
Sbjct: 48 -------------------LFLEGSAALDENSQALLVNQATWLKTYPNWLVKIQGHADDP 88
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT N +S +RA+V+++ LI +GV + R V+G+ + P+ D + ++ N+R+ +
Sbjct: 89 GTEAANKTLSTQRAEVVQAALIAQGVDAKRLW-VKGYGIERPVTDCDPEACQRLNRRVVL 147
Query: 181 QI 182
+
Sbjct: 148 NL 149
>gi|221209714|ref|ZP_03582695.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
gi|221170402|gb|EEE02868.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
Length = 428
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 7/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
+ + ++ + V F ++ P++ IA + K P
Sbjct: 291 LKQLLKDEIAAGTVSVDEDARRSVVTFRGDAMFRPGGASVQVSMNPLIAKIAAEIAKVPG 350
Query: 109 TVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I +TD++ G +N +S+ERA + L + G P+
Sbjct: 351 -KVTIVGYTDNVPIRSGQFASNQALSEERATQVMQMLQAA-GVQANRLEAVGKGDANPVG 408
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T GR N+R+EI +
Sbjct: 409 DNRTAQGRAQNRRVEIDV 426
>gi|300866278|ref|ZP_07110987.1| putative Outer membrane protein F [Oscillatoria sp. PCC 6506]
gi|300335726|emb|CBN56147.1| putative Outer membrane protein F [Oscillatoria sp. PCC 6506]
Length = 314
Score = 83.9 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 3/145 (2%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ S + + + V D + +P V F L +L +
Sbjct: 170 GKDSSPIPGIKANNADESSGDRSSV-FSADALMVTLPSDVLFEVGSSALRPGTNVILDNL 228
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
L + + I HTD G +K+N +S RA ++ YL + ++++ G+
Sbjct: 229 IADLQNYEGATVRIAGHTDDAGEVKDNQNLSFARAQAVEQYLSKTLGEKYHWVAI-GYGE 287
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFP 184
P N T+ RQ N+RIE+ I P
Sbjct: 288 SRPSVENTTEANRQRNRRIEVAIAP 312
>gi|152971453|ref|YP_001336562.1| putative outer membrane lipoprotein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150956302|gb|ABR78332.1| iron-regulated membrane protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 127
Score = 83.9 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 47/117 (40%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + ++ L + +A+ L T ++ HTD+ G
Sbjct: 8 ESNGDWSLGLSDSILFDKNDYRLRPDSRQQITTMASRLAATGITHSRLEGHTDNYGEDSY 67
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S +RA+ + + + RG KYPI +NDT GR N+R+ + I
Sbjct: 68 NEALSLKRANSVADAWAEGAHVPRSNLVTRGLGKKYPIASNDTAAGRAENRRVTVVI 124
>gi|262190496|ref|ZP_06048743.1| protein F-related protein [Vibrio cholerae CT 5369-93]
gi|262033626|gb|EEY52117.1| protein F-related protein [Vibrio cholerae CT 5369-93]
Length = 204
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 72/203 (35%), Gaps = 24/203 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREK-------------------KKVFLHKSNDTDIVNKR 42
+K + + ++GCG ++ + +T ++
Sbjct: 1 MK--FWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWGYAPQKNTSVMPNA 58
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIA 100
+ ++ + L GI + GD + V + L +A
Sbjct: 59 MTQPRSASYEDLRHYLSSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVA 118
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L I ++ HTD+ G+ K N +++ RA+ + + + + I RGF
Sbjct: 119 RFLATESGIDIVLEGHTDNTGSEKLNDKLAERRANAV-KAALVQSRVAQNAIYTRGFGEN 177
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P TN TK GR N+R+EI+
Sbjct: 178 VPACTNSTKNGRACNRRVEIRFI 200
>gi|209965094|ref|YP_002298009.1| outer membrane lipoprotein omp16 [Rhodospirillum centenum SW]
gi|209958560|gb|ACI99196.1| outer membrane lipoprotein omp16 [Rhodospirillum centenum SW]
Length = 163
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 59/183 (32%), Gaps = 24/183 (13%)
Query: 2 IKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++ LS+F + S C A +
Sbjct: 1 MRFKFLSLFAALMLVSACQSAPETTATTTTGGTTTAAPATPTG----------------- 43
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
V + + V F L + L A L ++P+ + ++ H D
Sbjct: 44 ---PVPGSAEDFVANVGDRVFFGFDRFDLTPEATATLDRQAAWLKQYPNVTVTVEGHADE 100
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-I 178
GT + NL + + RA +K+YL GV + R ++ + + P + N+R +
Sbjct: 101 RGTREYNLALGERRATAVKNYLTALGVDTARVQTIS-YGKERPAVLGSDESAWAQNRRGV 159
Query: 179 EIQ 181
+
Sbjct: 160 TVI 162
>gi|152986859|ref|YP_001349884.1| peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa PA7]
gi|150962017|gb|ABR84042.1| peptidoglycan associated lipoprotein OprL [Pseudomonas aeruginosa
PA7]
Length = 169
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 18/165 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + +N N +G+ + S + I
Sbjct: 22 GCSSKGGD---ASGEGANGGVDPNAGYGA-------------NSGAVDGSLSDEAALRAI 65
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + ++ HTD GT + N+ + + RA
Sbjct: 66 TTFYFEYDSSDLKPEAMRALDVHAKDLKG-SGQRVVLEGHTDERGTREYNMALGERRAKA 124
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+ + S + + + + P+ T + N+R+E++
Sbjct: 125 VQRYLVLQ-GVSPAQLELVSYGKERPVATGHDEQSWAQNRRVELR 168
>gi|148979688|ref|ZP_01815660.1| outer membrane protein, putative [Vibrionales bacterium SWAT-3]
gi|145961665|gb|EDK26963.1| outer membrane protein, putative [Vibrionales bacterium SWAT-3]
Length = 202
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 69/186 (37%), Gaps = 6/186 (3%)
Query: 2 IKELGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K L + +T + C +E++ + ++ + + A D
Sbjct: 1 MKITYLLLPALTMSLLACSS-QQEEEYIETPEAEQISDLQDDDKDGVVNARDTCPATPPA 59
Query: 61 TGIVVSRIGDMIT---CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + G++I + + F + +A L + S I IQ +
Sbjct: 60 SLVDNEGCGEIIRAEEVRQLNILFANDSYEVNPIFSDQITTMAEFLETYQSASIEIQGYA 119
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+G+ + NL +S++RA ++ L+ G+ S+R + V G+ D N+R
Sbjct: 120 SKVGSSEYNLELSKKRAHNVEDELLYNGIDSSR-VRVVGYGEDRLESDGDDATSHALNRR 178
Query: 178 IEIQIF 183
+ +
Sbjct: 179 VTATVV 184
>gi|319781028|ref|YP_004140504.1| peptidoglycan-associated lipoprotein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166916|gb|ADV10454.1| peptidoglycan-associated lipoprotein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 168
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 58/174 (33%), Gaps = 28/174 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++ M I+GC L +
Sbjct: 12 VMIALVAMLAIAGCASKKTPNNAADLGLNGAGAATPGSAQD------------------- 52
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
T I + F ++ + L A LN++ I ++ H D GT
Sbjct: 53 -------FTVNIGDRIFFDTDSTSIRADAQTTLSRQAQWLNQYKQYAIVVEGHADERGTR 105
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NL + RA + +L+ +GVS++R ++ + + P+ D N+R
Sbjct: 106 EYNLALGARRAAATRDFLVAKGVSASRLKTIS-YGKERPVAVCDDISCWSQNRR 158
>gi|315123150|ref|YP_004065156.1| hypothetical protein PSM_B0207 [Pseudoalteromonas sp. SM9913]
gi|315016910|gb|ADT70247.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
Length = 426
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 14/191 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK-------AEDEFQMQ 57
+ + ++ + + + VF I ++DK E Q +
Sbjct: 237 IFSVLGLILLMIYLSINMKLNNDVFAINEKLAGIHPLAVNQTVDKKDQQLRVLEQLLQTE 296
Query: 58 LQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
++ + V++ D I I ++ + L F P+L+ +A L + I H
Sbjct: 297 IKMGIVAVAKNSDGIRITINSENLFKQGDSQLLPSFQPILEKLALSLEGTKG-RVLITGH 355
Query: 117 TDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD + +N +S RA + + + + S R G PI +N R
Sbjct: 356 TDDLPISTDKYPSNWHLSLARATQVANLMAKSTNLSGRLW-PEGKGAAEPIASNSDSASR 414
Query: 173 QNNQRIEIQIF 183
N+RIEI +
Sbjct: 415 SLNRRIEIDLL 425
>gi|254517026|ref|ZP_05129084.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3]
gi|219674531|gb|EED30899.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3]
Length = 270
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 10/168 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A+ + ++ +++ + + + V+ + IP
Sbjct: 96 SAANARTPEAALGDIASEQEMTGVEAAVQTSIGDL---IAPDRFAVTGNDKWLEIKIPAR 152
Query: 80 VSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERA 134
+ F S L +PML+ +A L P+ + +Q HTD+ +N +S RA
Sbjct: 153 MLFPSGSRSLLASSIPMLRRLADTLKALPN-EVVVQGHTDNQPIRNGQFPSNWELSTARA 211
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I + +S GF PI N ++ GR N+R+ + +
Sbjct: 212 AAIARVF-EEEGVDPVKLSAVGFGPNRPIADNASEEGRAENRRVVVLV 258
>gi|134095585|ref|YP_001100660.1| putative peptidoglycan-associated lipoprotein (pal) [Herminiimonas
arsenicoxydans]
gi|133739488|emb|CAL62539.1| putative peptidoglycan-associated lipoprotein precursor pal-like
[Herminiimonas arsenicoxydans]
Length = 167
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 22/182 (12%), Positives = 55/182 (30%), Gaps = 18/182 (9%)
Query: 2 IKELGLSMFI--MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
++ + + + ++ C + K + V+ R +++ + D
Sbjct: 1 MRTITSAFILSTAMLLAACSSTKLDDK--APIEDRTGSSVDPRSVGTVNASSDPLNDP-- 56
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
++ ++ ++ A L + I IQ +TD
Sbjct: 57 -----------QGVLAKRSVYFDYDSYVVKPEYQQVVANHAKYLQSNRTRKIIIQGNTDE 105
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G + NL + Q+RA+ + + + + P + N+R +
Sbjct: 106 RGGAEYNLALGQKRAEAV-RKSLSLLGVPESQMEAVSLGKEKPKALGSDEAAWAENRRAD 164
Query: 180 IQ 181
I
Sbjct: 165 IV 166
>gi|254502312|ref|ZP_05114463.1| OmpA family protein [Labrenzia alexandrii DFL-11]
gi|222438383|gb|EEE45062.1| OmpA family protein [Labrenzia alexandrii DFL-11]
Length = 190
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 59/178 (33%), Gaps = 24/178 (13%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ L++ ++ C AS + I
Sbjct: 25 ICLAVVFGLGLASCNTASNLASPNVTNAPAAGFAE-----------------------IR 61
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ I + + L A L + S ++ +Q H D G+
Sbjct: 62 PGSEEEFIINVGRRIYFDRGSATVSDEAKMTLDNQAKWLKQNKSWLVKVQGHADDPGSEA 121
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S +RA + + LI+RGV++ R V+G+ + P+ D + N+R+ + +
Sbjct: 122 AQKTLSTQRATAVYNALIERGVNAKRMW-VKGYGVERPVTDCDAVTCQSQNRRVVVNL 178
>gi|85705227|ref|ZP_01036326.1| OmpA family protein [Roseovarius sp. 217]
gi|85670100|gb|EAQ24962.1| OmpA family protein [Roseovarius sp. 217]
Length = 191
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 9/177 (5%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDT---DIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
++ + + G+++++++ V + T D D AE + GI
Sbjct: 18 AIALGIAVMASGVSAQQQRTVVGERYIPTIWVDPDGCEHWVMDDGAEGYMSPHVTRQGIP 77
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V R ++ + + L+ + + I HTDS + +
Sbjct: 78 VCREANLCGVVNTDQLFATDSSRIGASGQQRLRE---FFQQANAVSYTIVGHTDSRASDE 134
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N+ +S RA+ + + VRG+ + P +N+T G N+R+EI
Sbjct: 135 YNMGLSLRRANSVAAVAR---GIGASIADVRGYGERMPKASNNTAEGMAQNRRVEIL 188
>gi|332877757|ref|ZP_08445498.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684337|gb|EGJ57193.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 660
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 6/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I ++ + K L I ++ + P+ + ++ HTDS G+ K NL +SQ
Sbjct: 544 ILNIENIYFDYNKANIRKDAAEQLAKIVKVMQEHPTMTVDVRLHTDSRGSDKYNLALSQR 603
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFP 184
RA I I+ +G+ ++ T+ Q N+R E I
Sbjct: 604 RAKSTIK-WITSHGIKKNRITGKGYGETQLVNECSNGVPCTEEQHQANRRSEFIIIS 659
>gi|163869125|ref|YP_001610364.1| peptidoglycan-associated lipoprotein [Bartonella tribocorum CIP
105476]
gi|161018811|emb|CAK02369.1| peptidoglycan-associated lipoprotein [Bartonella tribocorum CIP
105476]
Length = 172
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 60/174 (34%), Gaps = 23/174 (13%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L + +F + GCG + ++ G+ ++ +
Sbjct: 11 SLAILLFFSLCLGGCGKKNI-------------GALDGMHGAYMN--DAALNQGPGSGQE 55
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+GD + + L+ +L A L +P I I+ H D GT
Sbjct: 56 FTVNVGDRV-------FFSLDSSSLDADAERILTRQAEWLLHYPYYSIMIEGHADERGTR 108
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NL + Q RA +++YL+ S + I + + P+ D N+R
Sbjct: 109 EYNLALGQRRAVAVRNYLVSL-GVSAQRIQTISYGKERPVAVCDDISCWNQNRR 161
>gi|115375599|ref|ZP_01462856.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
gi|310823174|ref|YP_003955532.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|115367375|gb|EAU66353.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
gi|309396246|gb|ADO73705.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 468
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 13/170 (7%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + +++ + + + +V D I
Sbjct: 311 GCPDSDKDRDGIVDRLDACPEEPGVPE-----------EKGCAKKYKMVVVKKDRIEIKK 359
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERAD 135
++ S + + L +L+ IA +L P + I+ HTDS G +NL +SQ+RAD
Sbjct: 360 QINFGTGSAKIVGAQSLAILKDIALVLVDMPIIKKVRIEGHTDSQGADASNLRLSQKRAD 419
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + LI+ G+ R + G+ PI +N TK GR N+R E I +
Sbjct: 420 AVMAQLIKLGIDPGR-LEAVGYGETKPIASNATKAGRAENRRTEFNIVEQ 468
>gi|253998497|ref|YP_003050560.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4]
gi|253985176|gb|ACT50033.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4]
Length = 313
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 54/148 (36%), Gaps = 7/148 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLI 99
+ + + + + + I V + + I + F L+ L I
Sbjct: 104 EAMTAMANNLANHLAPMVLEGKIKVMQNNRGVRVDIHDSLLFAPGASELQPIASGPLNEI 163
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVR 155
A L I ++ HTD++ + N +S RA + L + +S
Sbjct: 164 AQALKANNHA-IQVEGHTDNVPIHNDKFYSNWELSAMRASSVVRMLQD-SGLDEKRLSAV 221
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
GF P++ N T +GR N+R+ I I
Sbjct: 222 GFGASQPLEDNSTPLGRARNRRVSIMIL 249
>gi|225012825|ref|ZP_03703259.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
gi|225003099|gb|EEG41075.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
Length = 283
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ D I ++ ++ I + F + + +L +AT++N P ++ H
Sbjct: 135 MSDDDIEINVEKGVVYVSISDKLLFRSGSYTVTSRAKEVLGKVATVVNNKPELEFMVEGH 194
Query: 117 TDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD++ + N +S +RA + L + + ++ G ++ P+ NDT R
Sbjct: 195 TDNVPIKSDGIVDNWDLSVKRATAVVRILEKDFGVAPARMTAAGRSFYIPVADNDTAANR 254
Query: 173 QNNQRIEIQIFPRGN 187
N+R I + P+ N
Sbjct: 255 AKNRRTRIVVLPKLN 269
>gi|302532142|ref|ZP_07284484.1| type VI secretion system OmpA/MotB [Streptomyces sp. C]
gi|302441037|gb|EFL12853.1| type VI secretion system OmpA/MotB [Streptomyces sp. C]
Length = 214
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
D + + V F L + +A + + + + TD++GT
Sbjct: 91 EESSDDVKLTLQSEVLFAKDSAELSGAAGARIAEVAQEIRQNSPRKVMVCGFTDNLGTYA 150
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ +S +RA+ + L + +S V G + PI N T+ GR+ N+R+EI
Sbjct: 151 HGKTLSTQRAEAVHKALAAQLSASGIAYEVVGKSEDDPIADNSTEEGRKKNRRVEI 206
>gi|119383378|ref|YP_914434.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119373145|gb|ABL68738.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
Length = 768
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 2/171 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIP 77
S + + + + L D L + +
Sbjct: 450 SGVSGSQTASDMAAARLAQRLGAGARYELAIRYDRRMDPLLGLPSGIECVDRLNAAMQQS 509
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ + P L+ +A + I I HTDS G+ N +S+ RA +
Sbjct: 510 EIGFEPNKSVIAGDPGPTLERLAETMKLCADFRIEIGGHTDSQGSEGFNAELSRARAQAV 569
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ + ++ +G+ PI NDT GR+ N+RIE + +
Sbjct: 570 LA-AMTAAGIDTANMTAKGYGESQPIADNDTDAGREANRRIEFLLLADDPV 619
>gi|15615801|ref|NP_244105.1| flagellar motor protein MotS [Bacillus halodurans C-125]
gi|10175862|dbj|BAB06958.1| BH3239 [Bacillus halodurans C-125]
Length = 250
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 6/126 (4%)
Query: 62 GIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I +R + + F E + P L + T++ P+ + ++ HTD+
Sbjct: 115 QISATRDDRGVVLILQEQALFETGEAEVLPGARPFLDKVGTLVELIPNI-VKVEGHTDNR 173
Query: 121 G----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+N +S RA + Y+I GF P+ N T+ Q N+
Sbjct: 174 PISTYRYPSNWELSGARASSVIRYIIDHHNVDPSRFIATGFGDTRPVVPNTTEENLQQNR 233
Query: 177 RIEIQI 182
R+ I I
Sbjct: 234 RVIIVI 239
>gi|328675505|gb|AEB28180.1| Outer membrane lipoprotein omp16 precursor [Francisella cf.
novicida 3523]
Length = 417
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 72/196 (36%), Gaps = 24/196 (12%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K +L L ++ T+ C + + K +L+ E
Sbjct: 1 MKKLSKLCLIASLLATLVACQTTADKDKNK-----------GPLTFPTLEPCTPELLQSN 49
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-- 116
+ V + G + L + +L + L +T I+ +
Sbjct: 50 KSFICVKEQAGPDLIET--NIKFDADSYTLNAQAKEVLDKLFAYLKLTDTTRFTIKGYAG 107
Query: 117 -------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
TD N+ +S+ RA ++ YL+ +G+ S+ I+++ Y+ PI ND+
Sbjct: 108 KVESKILTDQKILTDYNIRLSKNRASSVEEYLVNKGLDSSDGITIKALGYQDPIAPNDST 167
Query: 170 VGRQNNQRIEIQIFPR 185
R NQR+EI + R
Sbjct: 168 SSRAINQRVEITLESR 183
>gi|297183997|gb|ADI20117.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [uncultured alpha proteobacterium
EB080_L06A09]
Length = 613
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 3/171 (1%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
ISG + K+ S + +K K ++F + + +
Sbjct: 439 ISGVSGSKETAGKISRILSVR--VGSKGIYKISAKYNEKFAPKPKIKSARLCESEINTII 496
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+V L +++LIA +L P IQ HTDS G+ + N +SQ RA
Sbjct: 497 SNTKIRFEPGKVVLNDDNFTVIKLIADVLRTCPEAKFEIQGHTDSSGSEELNQNLSQSRA 556
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + L+ R V ++ IS +G+ PI N T+ GR+ N+RIEI++
Sbjct: 557 EAVLFELLNRRVLTS-GISAKGYGSISPIADNKTEEGREINRRIEIKLVEE 606
>gi|332161206|ref|YP_004297783.1| hypothetical protein YE105_C1584 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665436|gb|ADZ42080.1| hypothetical protein YE105_C1584 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 558
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 57/127 (44%), Gaps = 2/127 (1%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL--PMLQLIATILNKFPSTVIAIQSHT 117
+ I + + + + + L+ L + ++ + + I H+
Sbjct: 424 NQQIESYQDIPAFSSTQMAPMFDSNSIKLKPNAQTNETLASLLLLVEQHQGRKVLIIGHS 483
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G+ N+ IS++RA V++ +LI+ + +RG P+ +NDT G+ N+R
Sbjct: 484 DNTGSASFNMTISEQRAVVVRDWLIKNSALAKEDFIIRGMGALEPVASNDTPAGQDQNRR 543
Query: 178 IEIQIFP 184
+E+ + P
Sbjct: 544 VEVLLLP 550
>gi|318605099|emb|CBY26597.1| putative OMPA family outer membrane porin precursor [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 556
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 57/127 (44%), Gaps = 2/127 (1%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL--PMLQLIATILNKFPSTVIAIQSHT 117
+ I + + + + + L+ L + ++ + + I H+
Sbjct: 422 NQQIESYQDIPAFSSTQMAPMFDSNSIKLKPNAQTNETLASLLLLVEQHQGRKVLIIGHS 481
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G+ N+ IS++RA V++ +LI+ + +RG P+ +NDT G+ N+R
Sbjct: 482 DNTGSASFNMTISEQRAVVVRDWLIKNSALAKEDFIIRGMGALEPVASNDTPAGQDQNRR 541
Query: 178 IEIQIFP 184
+E+ + P
Sbjct: 542 VEVLLLP 548
>gi|163786268|ref|ZP_02180716.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
gi|159878128|gb|EDP72184.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
Length = 684
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 61/150 (40%), Gaps = 4/150 (2%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ ++ F+M G + + + + + +L
Sbjct: 533 AEKGIDKNLKEEDPKRFEMLTDVEGPPIVEKEGKLFFELEPIYFDFEMWDIREDSKKILD 592
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ + ++P + I SHTDS GT++ N ++S++RA+ ++Y+ G + R + +GF
Sbjct: 593 QLVKKMERYPDIHLKISSHTDSRGTVRYNQILSEKRAESTRNYIALIGYINARRLQFKGF 652
Query: 158 AYKYPIDT----NDTKVGRQNNQRIEIQIF 183
PI N T Q N+R E +I
Sbjct: 653 GELSPIVECPMLNCTDEEHQLNRRSEFEII 682
>gi|99081935|ref|YP_614089.1| hypothetical protein TM1040_2095 [Ruegeria sp. TM1040]
gi|99038215|gb|ABF64827.1| flagellar motor protein-like protein [Ruegeria sp. TM1040]
Length = 784
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 56/161 (34%), Gaps = 14/161 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
K + + + L V GD + + L + +
Sbjct: 626 ANEAKDLEQYRSEFFGQLRSVL-GNQEGVRIEGDRFVF-ASEVLFALGSAELSEAGKAEI 683
Query: 97 QLIATILNKFP-------STVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQR 144
+A IL + +I + HTD+ G +N +SQ RA + Y+I
Sbjct: 684 AKVARILQNVAAAIPDDINWIIRVDGHTDNQRFVGAGKYADNWELSQGRALSVVRYMIDE 743
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ GF P++ DT R N+RIE+++ R
Sbjct: 744 LGIPPGRLAANGFGEFQPVNPADTPEARAQNRRIELKLTER 784
>gi|325953789|ref|YP_004237449.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323436407|gb|ADX66871.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 337
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ + I LN I+I +TD+ G K+NL +S++RA+ +K
Sbjct: 235 FDTDKATLKADGKEAVAEITKALNTDKMLKISINGYTDNTGDEKHNLDLSKQRAETVKKE 294
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
LI + +S GF PI N+T+ G+ N+R+E+
Sbjct: 295 LI-KSGIDVNRLSSEGFGQNNPIADNNTEEGKSQNRRVELI 334
>gi|317129962|ref|YP_004096244.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
gi|315474910|gb|ADU31513.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
Length = 258
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 59/180 (32%), Gaps = 21/180 (11%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV---------------SR 67
+ K + D F + LD ++E QL D + V SR
Sbjct: 69 DNPAEDRDTKDDPFDNEVDPFENFLDSKKEENNQQLDDLLVEVLDFLEANNLYESISASR 128
Query: 68 IGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ + V F S L L + T++ P+ I ++ HTDS
Sbjct: 129 DDRGVVLVLQEQVLFESARAELISDATAFLDKVGTLIESVPN-PIMVEGHTDSRPIETFQ 187
Query: 127 ----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S RA + YL+ G+ PI N T Q N+R+ I I
Sbjct: 188 FPSNWELSGARASSVIRYLVDNHDLDQSRFVSVGYGDTRPIAPNTTNENLQKNRRVVIVI 247
>gi|153832936|ref|ZP_01985603.1| putative protein F-related protein [Vibrio harveyi HY01]
gi|148870859|gb|EDL69758.1| putative protein F-related protein [Vibrio harveyi HY01]
Length = 209
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 70/207 (33%), Gaps = 28/207 (13%)
Query: 2 IKELGLSMFIMTTISGCGL--ASREKKKVFLHKSNDTDIV------------------NK 41
+K L ++GC + L + T+
Sbjct: 1 MKHWFLV--ACGFLAGCTSINSDMVPGGNMLDTAPRTNSELRHPEWGYAKSYSSAPRYVA 58
Query: 42 RFGSSLDKAED---EFQMQLQDTGIVVS-RIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
+ SS++K +M L I G+ + + V F L + +
Sbjct: 59 QVPSSMEKKSQGVMSLEMFLNRHQIAHETISGEHLMIRLKEQVHFQTGSARLSAQSQDWI 118
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
Q + L + I H DS G N +S++RA ++ L+ + R S RG
Sbjct: 119 QSLGHYLAGRTDVDVVIDGHADSTGAASFNDSLSEKRAREVEKQLLATSLPRQRVFS-RG 177
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIF 183
F P +N T G+ N+R+E+ +
Sbjct: 178 FGEYVPQCSNATASGKACNRRVELMLM 204
>gi|4098205|gb|AAD09577.1| Omp22 [Helicobacter pylori]
Length = 179
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 61/184 (33%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + + I+GC ++ + + +K E + +
Sbjct: 1 MKRSSVFGFLVAFLFIAGCKHNMDKETVAGDVSAKAVQSAPVSTEIAQEKQEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCTQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|313200583|ref|YP_004039241.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
gi|312439899|gb|ADQ84005.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
Length = 313
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 54/148 (36%), Gaps = 7/148 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLI 99
+ + + + + + I V + + I + F L+ L I
Sbjct: 104 EAMTAMANNLANHLAPMVLEGKIKVMQNNRGVRVDIHDSLLFAPGASELQPIASGPLNEI 163
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVR 155
A L I ++ HTD++ + N +S RA + L + +S
Sbjct: 164 AQALKANNHA-IQVEGHTDNVPIHNDKFYSNWELSAMRASSVVRMLQD-SGLDEKRLSAV 221
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
GF P++ N T +GR N+R+ I I
Sbjct: 222 GFGASQPLEDNSTPLGRARNRRVSIMIL 249
>gi|170720329|ref|YP_001748017.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169758332|gb|ACA71648.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 237
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L LQ + LN+ + I + HTD++G+ N +S+ RA +
Sbjct: 133 QVMFAFDSADLTAGSQQRLQSLLPRLNELGVSRIKVVGHTDNVGSDSYNQALSERRAASV 192
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YLI + + + ++ G P+ NDT+ GR N+R+++ +
Sbjct: 193 AQYLISQ-GLAPQKVTSEGRGASEPVAENDTEQGRAQNRRVDLHL 236
>gi|119944499|ref|YP_942179.1| OmpA domain-containing protein [Psychromonas ingrahamii 37]
gi|119863103|gb|ABM02580.1| OmpA domain protein [Psychromonas ingrahamii 37]
Length = 195
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 60/166 (36%), Gaps = 1/166 (0%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
S A++ + ++ + +K E + ++ T +
Sbjct: 30 SAAMEANKAAMEQAAMDKAAMELAAMERAAEENKIETDGLQVVELTEEELMAQQYSDAIL 89
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
++ +F +L A L PS + I+ HTD GT N+ +S+ RA
Sbjct: 90 QKTIQFDFDTSMIKPEFTSILDAHAKFLVNNPSKKVTIEGHTDEKGTPGYNIALSERRAM 149
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ ++ ISV + + P++ ++ +N+R E+
Sbjct: 150 SVS-VYLENMGVLPDQISVVSYGEEKPLNFGHSEASWADNRRAELV 194
>gi|329904710|ref|ZP_08273911.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium
IMCC9480]
gi|327547854|gb|EGF32612.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium
IMCC9480]
Length = 270
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ + V++ ++ I V F E L + L IA +L++ + I
Sbjct: 120 LSPLISSGKVRVTQTSRGVSIEINASVLFAPGEASLTNESGAALSAIAQVLSQD-THAIQ 178
Query: 113 IQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I+ HTD++ +N +S RA + + ++ G P+ +NDT
Sbjct: 179 IEGHTDNLPIGNATFPSNWELSSVRASSVVRLF-SNNGIAENRLTAVGHGSNKPVGSNDT 237
Query: 169 KVGRQNNQRIEIQIF 183
GR N+R+E+ I
Sbjct: 238 PEGRVRNRRVEVLIL 252
>gi|260885301|ref|ZP_05734718.2| lipoprotein PG3 [Prevotella tannerae ATCC 51259]
gi|260852896|gb|EEX72765.1| lipoprotein PG3 [Prevotella tannerae ATCC 51259]
Length = 234
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 39/226 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR------------------- 42
+K L + SGC ++++ K +
Sbjct: 3 MKVSVLCLCAALLFSGCDMSNKAKGGLIGGGGGAALGAIIGGIAGKGKGAAIGGAIGAAV 62
Query: 43 -------FGSSLDKAEDEFQMQLQDTGIVVSRIGD--MITCYIPVHVSFV-SEVFLEKKF 92
G+ +DKA + + + ++ + P + F + L
Sbjct: 63 GAGAGILIGNKMDKAREAARRANAEAEVIKDDKTGLTYVKVTFPSGLLFQTGQDVLSSSA 122
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTL--------KNNLLISQERADVIKSYLIQR 144
L A L + + +TD+ G N ++S++RA+ + SYL
Sbjct: 123 RNDLATFAKNLTS--DMDLYVYGYTDNQGWRGASASESMNKNQVLSEQRANSVSSYLRSN 180
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
G+SS++ V+GF P+ +ND+ GR+ N+R+E+ + P + K
Sbjct: 181 GISSSQMKEVKGFGESNPVASNDSSTGREQNRRVEVYVMPSKEMIK 226
>gi|114320554|ref|YP_742237.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226948|gb|ABI56747.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 266
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 62/152 (40%), Gaps = 6/152 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
D V + +++ + +L + + V R+ + + P +F + FLP+
Sbjct: 84 DAVPDPIDQITAELQEQLEGELGEGLLEVERLDENVLIRFPEKAAFPSGSADVNASFLPI 143
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRF 151
L +A +L T I + HTD + ++N +S RA + L++
Sbjct: 144 LHTVAGVLAGQGGT-IRVSGHTDDVPIDTERFRSNWELSTARATEVVHLLLEAAPIEPGR 202
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+G A P+ N + R N+R+++ I
Sbjct: 203 FIAQGHADTRPLRPNTSPENRARNRRVDVLIT 234
>gi|107028365|ref|YP_625460.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116686361|ref|YP_839608.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105897529|gb|ABF80487.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116652076|gb|ABK12715.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
Length = 220
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 62/219 (28%), Gaps = 39/219 (17%)
Query: 2 IKELGLSMFIMTT-ISGCGLASR--------EKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
+K + L + ++ C AS + + D + + + A
Sbjct: 1 MKNIHLVLLASVVSLAACSSASGPTYNAYELQSRNGIRTFQVDCHGILSTAKTCMKVATR 60
Query: 53 EFQMQ---LQDTGIVVSRIGDMITCYIP--------------------------VHVSFV 83
+ L DT D +
Sbjct: 61 MCGNEPVRLVDTTTPYRDGADPHSIVFQCGAAPAPTAAAVAPAPAPVEKVSLTGDAYFAT 120
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L L + + + +TD+ G+ +N +S+ RAD + + ++
Sbjct: 121 DSAVLTPAATAALDTLLNRQADRHFARVEVDGYTDATGSDAHNQALSKRRADAV-AGYLR 179
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G P +NDT GR N+R+EI +
Sbjct: 180 EHGLKADSFAAAGHGEANPAASNDTAEGRARNRRVEISL 218
>gi|319953189|ref|YP_004164456.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319421849|gb|ADV48958.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 604
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 50/103 (48%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ I +L + T ++++ HTD G+ + N +SQ RA + ++
Sbjct: 501 FDTGSANISSSSQSTLETIYNLLIQAEDTKLSLEGHTDDTGSSEANYDLSQRRAQAVVNF 560
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L +G+ RF +V G P+++N T GR N+R+ I +
Sbjct: 561 LRTKGIPQTRFQNVIGKGEDEPVESNTTNSGRAKNRRVVIVLL 603
>gi|262276102|ref|ZP_06053911.1| peptidoglycan-associated outer membrane lipoprotein [Grimontia
hollisae CIP 101886]
gi|262219910|gb|EEY71226.1| peptidoglycan-associated outer membrane lipoprotein [Grimontia
hollisae CIP 101886]
Length = 173
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 60/181 (33%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ M T++ C S + + +D
Sbjct: 6 VLKSLAVALP-MFTLAAC---SSSDSSTDSTGTETNTGSQTTVVTPVDG---------GQ 52
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G+ I + + + +F ML A L + ++ H D
Sbjct: 53 GGLTEQEIRNNELRQSQTVYFSFDDYSVLPQFEDMLDAHAEFLRANADIKVVVEGHADER 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + YL + IS+ + + P+ + N+R +
Sbjct: 113 GTPEYNIALGERRANAVAKYLQAL-GVPSSQISIVSYGEEKPLVLGQGEDAYSKNRRAVL 171
Query: 181 Q 181
Sbjct: 172 V 172
>gi|124004618|ref|ZP_01689462.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123989741|gb|EAY29270.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 247
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L I +L K+P + I+ HTDS+G + N +S +RA +++
Sbjct: 144 LFPSGSPQINSGTYTQLNAIVKLLKKYPKARLLIEGHTDSVGNTQKNKALSLKRASFVQA 203
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
Y +++ + + V G PI +NDT VGR N+RIE+++
Sbjct: 204 YFVRQ-GIAAHRLKVIGKGATTPIASNDTAVGRSKNRRIEVRLI 246
>gi|261821727|ref|YP_003259833.1| hypothetical protein Pecwa_2465 [Pectobacterium wasabiae WPP163]
gi|261605740|gb|ACX88226.1| type IV / VI secretion system protein, DotU family [Pectobacterium
wasabiae WPP163]
Length = 413
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 56/139 (40%), Gaps = 7/139 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPS 108
+ + ++ + V D + F S + ++ +++ +A +N
Sbjct: 260 LKSFLKPEIDAGLVAVRDEADQSVVTLKGDGLFASASTDVRGRYDVVIKRVAEAMNNVRG 319
Query: 109 TVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ + ++D++ +N +S RA +++ L Q+ +R ++ G +P+
Sbjct: 320 -KVLVIGYSDNVPIRSARFASNYELSLARAQSVQTLLQQQLTQPSR-VTAAGRGENHPLV 377
Query: 165 TNDTKVGRQNNQRIEIQIF 183
N R N+R+EI +
Sbjct: 378 PNTNAENRARNRRVEITLL 396
>gi|126733592|ref|ZP_01749339.1| peptidoglycan-associated lipoprotein, putative [Roseobacter sp.
CCS2]
gi|126716458|gb|EBA13322.1| peptidoglycan-associated lipoprotein, putative [Roseobacter sp.
CCS2]
Length = 173
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 19/184 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ K+ + + ++ + C R ++ + GS+ D A F Q
Sbjct: 3 VFKKAAI-VALVLATAACTNPDRFGGGAGAGGADGAGLNTGAAGSASDPASPLFFNQTIG 61
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + V + + +L A L I+ H D
Sbjct: 62 DRV----------------LFAVDTSTITPEGQTILDGQAQWLLTNADYRAVIEGHADEQ 105
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + NL + Q RA+ ++ YL+ R + + V F + PI + N+R +
Sbjct: 106 GTREYNLALGQRRANAVREYLVSR-GVPSTRLQVTSFGKERPIAICSEESCYAQNRRA-V 163
Query: 181 QIFP 184
+
Sbjct: 164 TVLS 167
>gi|289679931|ref|ZP_06500821.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
Length = 190
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + + + + + L+ + + L
Sbjct: 45 ASAQQQGRWLEDQILS--LATTETDRGLVMTLGDVLFDAGHAELKNSASRTILKVVQFLQ 102
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P V+ I+ +TDS G ++NL +S++RA + ++ + I V G+ ++P++
Sbjct: 103 INPRRVVRIEGYTDSTGDRQDNLKLSKDRAQAVAD-VLMDLGVDEKRIHVEGYGQEFPVN 161
Query: 165 TNDTKVGRQNNQRIEIQ 181
N + GR N+R+EI
Sbjct: 162 ANTFERGRAQNRRVEIV 178
>gi|126728270|ref|ZP_01744086.1| hypothetical protein SSE37_19807 [Sagittula stellata E-37]
gi|126711235|gb|EBA10285.1| hypothetical protein SSE37_19807 [Sagittula stellata E-37]
Length = 911
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 62/185 (33%), Gaps = 14/185 (7%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
++ R ++ + + + K + + + + + GD
Sbjct: 729 AALARVAQEERRRRVLEEEERKRLEAEKKDLEAYRSEFFGRLRQVV-GDRDDIRIEGDRF 787
Query: 73 TCYIPVHVSFVSEVFLEKKFLP-------MLQLIATILNKFPSTVIAIQSHTDSIGTL-- 123
+ L +L+ +A + +I + HTD++
Sbjct: 788 VFS-SEVLFEQGSADLSPLGRREIAKVSNILRRLARDIPDEIDWIIRVDGHTDNVPVRGS 846
Query: 124 ---KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
++N +SQ RA + +I ++ GF P++ +T R N+RIE+
Sbjct: 847 AEFEDNWDLSQARARAVVKDMIDNYGIPPNRLAANGFGEYQPVNPANTAEARAQNRRIEL 906
Query: 181 QIFPR 185
++ +
Sbjct: 907 KLTEK 911
>gi|229072015|ref|ZP_04205225.1| OmpA/MotB domain protein [Bacillus cereus F65185]
gi|229081763|ref|ZP_04214256.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2]
gi|228701608|gb|EEL54101.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2]
gi|228711174|gb|EEL63139.1| OmpA/MotB domain protein [Bacillus cereus F65185]
Length = 234
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 67/175 (38%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L + + KK ++ + + K + + + +
Sbjct: 55 LSASSLEAEQTKKQEEARAKE-KKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 113
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I ++ F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 114 TILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWEL 173
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 174 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 228
>gi|77464589|ref|YP_354093.1| OmpA family outer membrane protein [Rhodobacter sphaeroides 2.4.1]
gi|77389007|gb|ABA80192.1| possible outer membrane protein, OmpA family [Rhodobacter
sphaeroides 2.4.1]
Length = 652
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+++ L +A + + + I HTDS G+ N +SQ
Sbjct: 491 VLAGQKITFEPGSAEIDQSARGTLDGLAEVFKVCKAMPLEISGHTDSQGSEGGNKALSQA 550
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ + L R V R +V G+ + PI N + GR+ N+RIE +
Sbjct: 551 RAEAVLLALQGRRVDVGRMKAV-GYGEERPIADNGKEEGREANRRIEFTLL 600
>gi|332559482|ref|ZP_08413804.1| OmpA family outer membrane protein [Rhodobacter sphaeroides WS8N]
gi|332277194|gb|EGJ22509.1| OmpA family outer membrane protein [Rhodobacter sphaeroides WS8N]
Length = 652
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+++ L +A + + + I HTDS G+ N +SQ
Sbjct: 491 VLAGQKITFEPGSAEIDQSARGTLDGLAEVFKVCKAMPLEISGHTDSQGSEGGNKALSQA 550
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ + L R V R +V G+ + PI N + GR+ N+RIE +
Sbjct: 551 RAEAVLLALQGRRVDVGRMKAV-GYGEERPIADNGKEEGREANRRIEFTLL 600
>gi|320535353|ref|ZP_08035469.1| OmpA family protein [Treponema phagedenis F0421]
gi|320147797|gb|EFW39297.1| OmpA family protein [Treponema phagedenis F0421]
Length = 437
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF-PSTVIAIQSHTDSIGTLKNNLL 128
+ I + + + + +IA L P T I+ HT I KN L+
Sbjct: 322 NTIKITMYDIRFIADSPEILPEEKGRVDIIARALRAMGPYTKFLIEGHTADINQPKNQLV 381
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S RAD I L +RG+ ++R + G+ PI NDT R N+R+EI I
Sbjct: 382 LSVARADKIAEELAKRGIDASRM-TTAGYGGTRPIAPNDTSPNRAKNRRVEITIM 435
>gi|293605836|ref|ZP_06688207.1| flagellar motor protein MotB [Achromobacter piechaudii ATCC 43553]
gi|292815749|gb|EFF74859.1| flagellar motor protein MotB [Achromobacter piechaudii ATCC 43553]
Length = 361
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 11/152 (7%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ + + L + V ++ I + F + L L
Sbjct: 141 DGVTVAEAAPPLKAPSKESLGLGDLAKSVDVIINEQSVSFRISNELLFPSGQATLSPSGL 200
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSN 149
+++ +A ILNK + ++++ H+D + +N +S RA + L+ +
Sbjct: 201 DVIKRLAGILNKN-AYQVSVEGHSDPVPIQTRQFASNWELSSSRATSVLRELV-HDGVAP 258
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ G+A PI+TNDT GR N+R+E+
Sbjct: 259 ERLRAVGYAETRPIETNDTPAGRAANRRVELI 290
>gi|256422968|ref|YP_003123621.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256037876|gb|ACU61420.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 499
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T IP + + L K L + + + S + + HTD+ GT N +S +
Sbjct: 386 TLVIPDILFKFNSSELNKNLYSSLDSLIKRIPRDGSIQLQVNGHTDNAGTSAYNNSLSMK 445
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ + Y+ + G+ ++ + + G P+ N + GR+ N+R+EI I
Sbjct: 446 RANAVAGYMQEHGLGNDIRL-ITGVGESQPVADNQSAAGRRRNRRVEIII 494
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 8/113 (7%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS--TVIAIQSHTDSIGTLKNNLLIS 130
T + + V + L ++ + LN++ I + + + + N +IS
Sbjct: 258 TIILKDDLFTVDKNSLNDRYKQQIDE---ALNRYKGNRARIQLIGYAWQKASEEYNRIIS 314
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ-NNQRIEIQI 182
++A + +YL+ S V+G P DT N R+E+ I
Sbjct: 315 ADKAKAVANYLVYNEGYSFDDFEVQGAGKTKPRY--DTAGNTAGENNRVEMII 365
>gi|296269185|ref|YP_003651817.1| OmpA/MotB domain-containing protein [Thermobispora bispora DSM
43833]
gi|296091972|gb|ADG87924.1| OmpA/MotB domain protein [Thermobispora bispora DSM 43833]
Length = 193
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 10/189 (5%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + ++ A ++ + V D + ++ D
Sbjct: 7 RFAALILALAVMAAPASAWADRAAPTPVPEDAVMPVEDLITPVEDVIAE---VESLDGTE 63
Query: 64 VVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF-PSTVIAIQSHTDSIG 121
+ G+ IT + V F + L K L+ IA + +I ++ HTD G
Sbjct: 64 SEEKQGEQITLALTADVLFPLDKATLTAKARQRLREIAEKIKSDGAGGLIRVEGHTDDQG 123
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQ 176
+ NL +S+ RA+ ++ L + N + +G+ P N + R N+
Sbjct: 124 SDAYNLALSRRRAEAVRRVLERELAGMNVTLQAKGYGESRPKVPNFIKGRPVEKNRAKNR 183
Query: 177 RIEIQIFPR 185
R+EI R
Sbjct: 184 RVEIIFTAR 192
>gi|254785497|ref|YP_003072926.1| OmpA family protein [Teredinibacter turnerae T7901]
gi|237684013|gb|ACR11277.1| OmpA family protein [Teredinibacter turnerae T7901]
Length = 305
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 66/197 (33%), Gaps = 22/197 (11%)
Query: 6 GLSMFIMTTISGCG-LASREKKKVFLHKSNDTDIVNK--------------RFGSSLDKA 50
+++ + E K L ++ L+
Sbjct: 23 FVTLLFGFFVVMYSVSQVSETKYRTLSETLSGAFSGAVQTPPTNLPRTALVAPDDLLNTL 82
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPST 109
Q+ + VS D + + + F + +A +L F +
Sbjct: 83 NAVLSQQIGAGMVTVSGNEDWVEIAVKSQLLFASGSAAPSTAAQQIFNELADVLAPFENA 142
Query: 110 VIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
IA+ HTD++ +NN +S RA + + L+ + ++ G+ P+
Sbjct: 143 -IAVSGHTDNVPIRNQQFQNNWELSAARAVAVVN-LLAYAGVAPERLAATGYGEFQPVAD 200
Query: 166 NDTKVGRQNNQRIEIQI 182
N++ GR N+R+ ++I
Sbjct: 201 NNSAQGRAANRRVVLRI 217
>gi|229163499|ref|ZP_04291450.1| OmpA/MotB domain protein [Bacillus cereus R309803]
gi|228620068|gb|EEK76943.1| OmpA/MotB domain protein [Bacillus cereus R309803]
Length = 233
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 64/175 (36%), Gaps = 7/175 (4%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L S + KK ++ + + + + +
Sbjct: 55 LSASSLESEKMKKNA--EAEVKQQEMNELKAVQKGIDKYIEENKLSSSFKTDLTEKGLKV 112
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++ +L I + HTD++ +N +
Sbjct: 113 TILENVLFDSGKADVKLESLNIAKEMSNLLVSTSPREITVSGHTDNVPIANAQFASNWEL 172
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 173 STQRAVNFMQVLLQNKELQPEKFSAVGYGEYRSIAPNDTQEGKAKNRRVEVFILP 227
>gi|212636483|ref|YP_002313008.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212557967|gb|ACJ30421.1| OmpA [Shewanella piezotolerans WP3]
Length = 364
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 5/160 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRI-GDMITCYIPVH 79
+ K + D N +D+ D ++ G + + D
Sbjct: 195 GSKSKPIVPVAVVVGDADNDGVNDDMDQCPDTPATHKVDSNGCTIYQDAEDKFEIEAK-- 252
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ +++ ++ +A ++K P++ + I H + G N+ +S+ RA +
Sbjct: 253 -FATNSAIVQESSYSDIKDLAEYMSKHPNSEVVIAGHASNTGAADYNMALSERRAIAVAD 311
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
LI + +S +G+ P+ +K Q N+RIE
Sbjct: 312 VLINEYGIAPARVSSKGYGITQPLIEGSSKEANQANRRIE 351
>gi|149773177|dbj|BAF64763.1| outer membrane protein A [Shewanella livingstonensis]
Length = 385
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 62/156 (39%), Gaps = 4/156 (2%)
Query: 36 TDIVNKRFGSSLDKAEDEFQM-QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
D +++DK D ++ TG V + + +
Sbjct: 229 GDDDKDGVTNNIDKCPDTPSTHKVDATGCSVYENVTT-KYDLGGILFANDSAEIRAGSFA 287
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L+ +A L K+P +++Q H ++G + N+ +S+ RA + S L ++ S IS
Sbjct: 288 DLEKLADHLTKYPQHTVSVQGHASNVGKAEYNMKLSERRAVAVASALNKKYGISISRISS 347
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
G+ P+ + + N+RIE + G K+
Sbjct: 348 VGYGVTKPVMQGSSAEANRVNRRIEAIVT--GTEKR 381
>gi|42783685|ref|NP_980932.1| flagellar motor protein MotB [Bacillus cereus ATCC 10987]
gi|42739614|gb|AAS43540.1| sodium-driven polar flagellar protein PomB, putative [Bacillus
cereus ATCC 10987]
Length = 261
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 64/175 (36%), Gaps = 7/175 (4%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L S + KK ++ + + + + +
Sbjct: 83 LSASSLESEKIKKNA--EAEVKQQEMNELKAVQKGIDKYIEENRLSSSFKTDLTEKGLKV 140
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++ +L I + HTD++ +N +
Sbjct: 141 TILENVLFDSGKADVKLESLSIAKEMSNLLVSASPREITVSGHTDNVPIANAQFASNWEL 200
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 201 STQRAVNFMQVLLQNKELQPGKFSAVGYGEYRSIAPNDTQEGKAKNRRVEVFILP 255
>gi|84514671|ref|ZP_01002035.1| flagellar motor protein [Loktanella vestfoldensis SKA53]
gi|84511722|gb|EAQ08175.1| flagellar motor protein [Loktanella vestfoldensis SKA53]
Length = 533
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 14/168 (8%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
++ + + + L+ + GD + V L
Sbjct: 368 EAEAARLQAEAENLERFRSDFFGQLRQVLEGQD-RIRIEGDRFVFS-SEVLFEVGRADLS 425
Query: 90 KKFLPMLQLIATILNKFPS-------TVIAIQSHTDSI-----GTLKNNLLISQERADVI 137
+ + +A ILN +I + HTD G +N +SQ RA +
Sbjct: 426 PQGRDEIANVAGILNDIADDIPAGIDWIIRVDGHTDDNPIAAGGRFADNWELSQARALSV 485
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+++ ++ GF P++T DT R N+RIE+++ R
Sbjct: 486 VRFMVDDLGIPPMRLAANGFGEYQPLNTADTAQARAQNRRIELKLTER 533
>gi|114564063|ref|YP_751577.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114335356|gb|ABI72738.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 376
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 62/156 (39%), Gaps = 4/156 (2%)
Query: 36 TDIVNKRFGSSLDKAEDEFQM-QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
D +++DK D ++ TG V + + +
Sbjct: 220 GDDDKDGVTNNIDKCPDTPSTHKVDATGCSVYENVTT-KYDLGGILFANDSAEIRAGSFA 278
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L+ +A L K+P +++Q H ++G + N+ +S+ RA + S L ++ S IS
Sbjct: 279 DLEKLADHLTKYPQHTVSVQGHASNVGKAEYNMKLSERRAVAVASALNKKYGISISRISS 338
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
G+ P+ + + N+RIE + G K+
Sbjct: 339 VGYGVTKPVMQGSSAEANRVNRRIEAIVT--GTEKR 372
>gi|110680553|ref|YP_683560.1| hypothetical protein RD1_3382 [Roseobacter denitrificans OCh 114]
gi|109456669|gb|ABG32874.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 659
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 14/175 (8%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+E+K ++ K + + L V GD +
Sbjct: 487 QEEKARLEAEAARLTAQTKNLEQYRSEFFGRLRDVL-GRQEGVRIEGDRFVFS-SEVLFE 544
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPS-------TVIAIQSHTDS-----IGTLKNNLLIS 130
+ L + + +A IL+ +I + HTD+ +G +N +S
Sbjct: 545 PARADLSSEGQEEIAKVARILSSVADEIPPEIDWIIRVDGHTDNLPLSGVGQFADNWELS 604
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
Q RA + Y++ ++ GF P+ DT R N+RIE++ R
Sbjct: 605 QGRALSVVKYMVDTLGIPPNRLAANGFGEFQPVAVEDTPEARAQNRRIELKFTER 659
>gi|119356692|ref|YP_911336.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
DSM 266]
gi|119354041|gb|ABL64912.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 162
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 59/174 (33%), Gaps = 13/174 (7%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
MF + +GC + + + SS+ G +
Sbjct: 1 MFSLMVTAGCSSKNAVNTQDGNAGLSSGQSGWGTTSSSV-------AQSPSGYGFDEWQK 53
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
G + L + L + + I IQ H D GT + NL
Sbjct: 54 GP-----LGDVFYDFDSSLLSSEAQEQLTRNSGWMKSNVQAAIIIQGHCDDRGTSEYNLA 108
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ RA + +LI+ G++S+R ++ F + P T+ ++ G N+R I
Sbjct: 109 LGDRRAVSAREFLIRTGIASSRIETIT-FGEERPFSTSQSEEGLAKNRRAHFVI 161
>gi|305432269|ref|ZP_07401432.1| fibronectin-binding protein [Campylobacter coli JV20]
gi|304444617|gb|EFM37267.1| fibronectin-binding protein [Campylobacter coli JV20]
Length = 332
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
E+ K ++K S E+ G ++ G T Y+ H F
Sbjct: 179 EQTKEVVNKPQVVTPAPAPVVSQSKCPEE------PREGALLDENGCEKTIYLEGHFDF- 231
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+V + F ++ IA IL++ ++ HTD+IG+ N +S+ RA+ + ++
Sbjct: 232 DKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAKE-LE 290
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ I G+ P +NDTK GR +N+R+E
Sbjct: 291 KFGVDKSRIQTVGYGQDKPRSSNDTKEGRADNRRVE 326
>gi|74317269|ref|YP_315009.1| flagellar motor protein MotD [Thiobacillus denitrificans ATCC
25259]
gi|74056764|gb|AAZ97204.1| outer membrane chemotaxis MotB protein [Thiobacillus denitrificans
ATCC 25259]
Length = 263
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+++ + V++ ++ I +V F L + L +L+ +A L P I
Sbjct: 115 MGPLVKEGKVRVTQSRRGVSIEINANVLFEPGRAELAPESLAVLRAVAAQLRHEP-FNIE 173
Query: 113 IQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I HTD + +N +S RA + L G++ +R ++ G PI +N T
Sbjct: 174 ITGHTDIVPISNSVFASNWELSAVRATSVVRLLADGGIAPSRLFAI-GREASQPIASNGT 232
Query: 169 KVGRQNNQRIEIQIFP 184
GR N+R+E+ I
Sbjct: 233 AEGRARNRRVELMILS 248
>gi|329295648|ref|ZP_08252984.1| putative outer membrane lipoprotein [Plautia stali symbiont]
Length = 157
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 1/135 (0%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ D ++D G + G + + ++E L + +A L
Sbjct: 22 RFSDAQIKAMRDAGFSENTEGWGLGLS-DKILFGINESDLTPASKASIAQMAKSLAATGI 80
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ + HTD+ G N +S +RA+ + + I RG P+ +N+T
Sbjct: 81 EHLRVDCHTDNYGKADYNQQLSLKRANAVADQWATGAAIPRQNIVTRGLGMSAPVASNNT 140
Query: 169 KVGRQNNQRIEIQIF 183
GR N+R+ I I
Sbjct: 141 AQGRAQNRRVAIVIT 155
>gi|296136887|ref|YP_003644129.1| peptidoglycan-associated lipoprotein [Thiomonas intermedia K12]
gi|295797009|gb|ADG31799.1| peptidoglycan-associated lipoprotein [Thiomonas intermedia K12]
Length = 180
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 68/165 (41%), Gaps = 5/165 (3%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC K+ + T + G++ + A +Q + G +
Sbjct: 18 GCAS-PVPVKQAPVESKAPTAVEGGTAGANANGAGQNQVAAVQAPAETNAGPGPNVP--- 73
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ +E ++ P+L AT L + P + +Q +TD+ G+ + NL + Q+RAD
Sbjct: 74 KSVYFAFNSYTVESQYTPVLNANATYLTQHPQAHVQLQGNTDARGSREYNLALGQKRADA 133
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + GV ++ ++ + + P +T+ N+R++I
Sbjct: 134 VMKGMELLGVKPSQMEAIS-YGKEKPKALGNTEADYAENRRVDIV 177
>gi|88860422|ref|ZP_01135060.1| putative Component of sodium-driven polar flagellar motor
[Pseudoalteromonas tunicata D2]
gi|88817620|gb|EAR27437.1| putative Component of sodium-driven polar flagellar motor
[Pseudoalteromonas tunicata D2]
Length = 290
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V + L K+ L I L P+ + I ++TDS G N +S++
Sbjct: 179 IEFTVLGYQKNSSELTKESKKRLDKIGEYLKNDPNIESVLISAYTDSYGGRYTNDELSKK 238
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA I + ++ + V GF K I N T +GRQ N+R+ IQI +
Sbjct: 239 RALTI-KTYMTELGVEDKRVEVEGFGEKRHIAPNTTILGRQLNRRVVIQIAKQ 290
>gi|330876044|gb|EGH10193.1| flagellar motor protein MotD [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 295
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K + + + D F ++ + V I + + F
Sbjct: 84 KDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSLLFVSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K +++ ++ I+ +F I ++ TD N +S R+ I
Sbjct: 144 DAMPSDKAFTIIEKVSGIVKRF-DNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVRM 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L G++ R SV G+ PI N T GR N+R+ + I +++
Sbjct: 203 LAMDGINPARLASV-GYGEFQPIAPNTTAAGRAKNRRVVLVISRNLEVRR 251
>gi|313200172|ref|YP_004038830.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
gi|312439488|gb|ADQ83594.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
Length = 170
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 65/178 (36%), Gaps = 22/178 (12%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L+ + T+S C + + + L++ G V
Sbjct: 13 LLAFTLSLTLSACKSTPAAPAQ--------------------ETLRQKQIRTLKEQGFVH 52
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ G ++ + ++ L + +Q ++ L + I+ H D+ G
Sbjct: 53 TDDGWALSF-ADKLLFDTNQAVLNDRSRGAVQKVSKALQSVGLNKMRIEGHADATGRESY 111
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N+ +S++RA + I + I VRG + P+ +N T GR N+R+ I +
Sbjct: 112 NVELSEQRAWAVADAFI-QSGMPKSGIIVRGMGSQSPVASNATVAGRAENRRVSIIVV 168
>gi|126463429|ref|YP_001044543.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126105093|gb|ABN77771.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 652
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+++ L +A + + + I HTDS G+ N +SQ
Sbjct: 491 VLAGQKITFEPGSAEIDQSARGTLDGLAEVFKVCKAMPLEISGHTDSQGSEGGNKALSQA 550
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ + L R V R +V G+ + PI N + GR+ N+RIE +
Sbjct: 551 RAEAVLLALQGRRVDVGRMKAV-GYGEERPIADNGKEEGREANRRIEFTLL 600
>gi|187922936|ref|YP_001894578.1| hypothetical protein Bphyt_0935 [Burkholderia phytofirmans PsJN]
gi|187714130|gb|ACD15354.1| type IV / VI secretion system protein, DotU family [Burkholderia
phytofirmans PsJN]
Length = 414
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 7/140 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPS 108
++ + ++ + V + F V + P++ IA+ + K P
Sbjct: 277 LKELLKNEIAAGTVSVDEDARHSSVTFRGDAMFPPGGVNVNASMGPLIAKIASEIGKVPG 336
Query: 109 TVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ + HTD++ S+ERA + L GV++ R + G PI
Sbjct: 337 -KVTVTGHTDNLPIRSRQFASNDALSEERATQVMQMLQASGVAAAR-LEAIGGGEANPIG 394
Query: 165 TNDTKVGRQNNQRIEIQIFP 184
N T GR N+R+EI + P
Sbjct: 395 DNATAQGRAQNRRVEITVTP 414
>gi|300772832|ref|ZP_07082701.1| outer membrane protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300759003|gb|EFK55830.1| outer membrane protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 650
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ I + ++ + +L + + + P+ I + SHTDS G+ N+ +
Sbjct: 531 EGIVFVLDNIYYDFNKSDIRPDAAKVLDQLVNTMTENPTLQIELSSHTDSRGSDNYNMKL 590
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
S RA Y+I +G++ R +S +G+ ++ T+ Q N+R E+++
Sbjct: 591 SDRRAKSAVDYIISKGIAKERLVS-KGYGETRLVNECANGVKCTEEQHQANRRTEVKVL 648
>gi|189346279|ref|YP_001942808.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245]
gi|189340426|gb|ACD89829.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245]
Length = 153
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 1/108 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + L + + LQ + + P+ + ++ H D GT + N+ + + R
Sbjct: 43 VELGDIFFDYDKSELRAEAVEQLQKNFDWMKQNPAGTLIVEGHCDERGTNEYNMALGERR 102
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
A+ K Y++ G R +V + + P + N+R
Sbjct: 103 ANAAKDYMVNVGADPARMQTVS-YGEERPFALGHDEASWAQNRRAHFV 149
>gi|319795794|ref|YP_004157434.1| peptidoglycaN-associated lipoprotein [Variovorax paradoxus EPS]
gi|315598257|gb|ADU39323.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus EPS]
Length = 167
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 64/182 (35%), Gaps = 20/182 (10%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + + + +++ C + + SN K E +
Sbjct: 1 MKKNFRILAIVALGASLAACSTPKSGRDDATYYYSNKGAAAVA-------KVEPPPPAAV 53
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q+ V +I + + + +++ A+ L ++ + I+ HTD
Sbjct: 54 QNGPAGVPKI----------VYFDFDKYNIRPQDQRIVEAHASFLKNRSTSRVVIEGHTD 103
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S G + NL + Q R++ ++ + + + + + P T+ G Q N+R
Sbjct: 104 SRGGREYNLALGQRRSESVQR-ALTQLGVPAERVEAISWGIEKPASMETTEEGYQLNRRA 162
Query: 179 EI 180
E
Sbjct: 163 EF 164
>gi|149278789|ref|ZP_01884924.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Pedobacter sp. BAL39]
gi|149230408|gb|EDM35792.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Pedobacter sp. BAL39]
Length = 175
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 9/160 (5%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS- 84
K + KS LD + ++R + I V F +
Sbjct: 20 KTQKIAKSTTPPATEVAADQELDNLKKNLPDN------QIARTNEGIKFTFSSEVLFPTN 73
Query: 85 EVFLEKKFLPMLQLIATILNKF-PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L + L +A ++++ P+ + I+ H+D GT N +S++RA + +
Sbjct: 74 SSILNEASKKKLAEVAKVISEQKPAPAVLIEGHSDKTGTAPYNQWLSEKRAVSV-KTYLV 132
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ I G P+ N TK GR N+R+EI +
Sbjct: 133 SLGIAASKIRTAGQGDTKPVGDNKTKEGRLQNRRVEITLL 172
>gi|29840731|ref|NP_829837.1| peptidoglycan-associated lipoprotein [Chlamydophila caviae GPIC]
gi|29835081|gb|AAP05715.1| peptidoglycan-associated lipoprotein [Chlamydophila caviae GPIC]
Length = 191
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 78/201 (38%), Gaps = 32/201 (15%)
Query: 1 MIKE----LGLSMFIMTTISGCG--------------LASREKKKVFLHKSNDTDIVNKR 42
M K+ + + + + C + + K+ D +N+
Sbjct: 1 MKKKYLGVISCLLLALFALPSCSYPYGDWDTVCEDYQHSKKRKQNFAFVPLYTDDEMNQN 60
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE-KKFLPMLQLIAT 101
F + D E++ + ++ ++ L +L +
Sbjct: 61 FADAYDSKEEQLYKTSSQS------------VSFRNITFATDSYTIKGEENLAILSSLVR 108
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ K P T + I+ HTD G NL + RA+ +K +LI++G+S++R ++ + +
Sbjct: 109 QMQKSPKTTLYIEGHTDERGAAAYNLALGARRANAVKQHLIKQGISADRLFTIS-YGKEQ 167
Query: 162 PIDTNDTKVGRQNNQRIEIQI 182
P+++ ++ Q N+R E ++
Sbjct: 168 PVNSGHNELAWQQNRRTEFKV 188
>gi|94267383|ref|ZP_01290861.1| OmpA/MotB [delta proteobacterium MLMS-1]
gi|93452026|gb|EAT02724.1| OmpA/MotB [delta proteobacterium MLMS-1]
Length = 388
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 53/135 (39%), Gaps = 4/135 (2%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+ L K ED+ + + + + + L A
Sbjct: 243 AEKAFLQKVEDKPVAEAVKEKKEPVHRTEARRLEVN---FEFDQARIRPADQAALGRFAQ 299
Query: 102 ILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L K+P I I HT ++G + N +SQ RA + +L+++ ++ + +G+
Sbjct: 300 FLKKYPELEEIEIAGHTCNMGPAEYNRQLSQRRAANVVKFLVEKEGIASERLLAKGYGSD 359
Query: 161 YPIDTNDTKVGRQNN 175
PI +NDT GRQ N
Sbjct: 360 KPIASNDTVAGRQQN 374
>gi|227823307|ref|YP_002827279.1| putative outer membrane lipoprotein Omp16-like protein precursor
[Sinorhizobium fredii NGR234]
gi|227342308|gb|ACP26526.1| putative outer membrane lipoprotein Omp16-like protein precursor
[Sinorhizobium fredii NGR234]
Length = 176
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 53/173 (30%), Gaps = 26/173 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ L++ + ++GC
Sbjct: 20 VMLALVMTLAVAGCASKKNLPNDAAGLGLGAGAATPGSQQDFT----------------- 62
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + L A L K+P+ I I+ H D GT +
Sbjct: 63 -VNVGDRI-------FFDTDSSSIRADAQATLARQAQWLAKYPNYAITIEGHADERGTRE 114
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + RA + YL +GV +NR ++ + + P+ D N+R
Sbjct: 115 YNLALGARRAAATREYLAGQGVPANRMRTIS-YGKEKPVAVCDDISCWSQNRR 166
>gi|220904130|ref|YP_002479442.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868429|gb|ACL48764.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 155
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/185 (12%), Positives = 59/185 (31%), Gaps = 35/185 (18%)
Query: 2 IKELGLSMFIMTTIS---GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K L + ++ ++ GC + D E + +
Sbjct: 1 MKRYALILALVMALAAGFGCAKKTT------------------GEPGYDDGMTPEMRAAV 42
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q + +E ++ ML+ +L ++P+ + I+ + D
Sbjct: 43 QQ-------------ITDGRVYFAFDKFNVENQYKEMLKQKGDLLKQYPAIRVRIEGNCD 89
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + NL + + RA + + + + + + P + + N+R
Sbjct: 90 DRGTQEYNLALGERRARAAYE-YLVMMGVNPNQLEMISYGKENPAVQGNNEAAWAKNRRD 148
Query: 179 EIQIF 183
+ ++
Sbjct: 149 DFRVI 153
>gi|311106778|ref|YP_003979631.1| motility protein B 2 [Achromobacter xylosoxidans A8]
gi|310761467|gb|ADP16916.1| motility protein B 2 [Achromobacter xylosoxidans A8]
Length = 320
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLP 94
++V + +++ + + V ++ I + F + L L
Sbjct: 147 GEVVAEAAPPLRAPSKESLGLGDLGKSVDVIINEQSVSFRISNELLFPSGQATLSPTGLD 206
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNR 150
+++ +A ILNK ++++ H+D + +N +S RA + L+ R S +
Sbjct: 207 VIKRLAAILNKN-EYQVSVEGHSDPVPIQTRQFASNWELSSSRATSVLRELV-RDGVSAQ 264
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ G+A PI++NDT+ GR N+R+E+
Sbjct: 265 RLRAVGYAETRPIESNDTQAGRAANRRVELI 295
>gi|90412130|ref|ZP_01220136.1| putative peptidoglycan-associated lipoprotein [Photobacterium
profundum 3TCK]
gi|90326854|gb|EAS43239.1| putative peptidoglycan-associated lipoprotein [Photobacterium
profundum 3TCK]
Length = 174
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 19/184 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKK---VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
++K L +++ +MT ++ C S T + G S +E E + Q
Sbjct: 6 ILKGLAIALPMMT-LAACSSTDSTDSSAASETTDGSAQTVVTTPVDGGSAALSEQELRSQ 64
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
V ++ + ML+ A L+ + ++ H
Sbjct: 65 ELRQEQTV--------------YFKFDTAEIQADYQAMLEAHAEYLSNSSDVKVIVEGHA 110
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + N+ + + RA+ + YL S IS+ + + P+ T N+R
Sbjct: 111 DERGTPEYNIALGERRANAVAQYLQAL-GVSASQISIVSYGEEKPLVLGHTDADYAKNRR 169
Query: 178 IEIQ 181
+
Sbjct: 170 AVLV 173
>gi|218887447|ref|YP_002436768.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758401|gb|ACL09300.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 170
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 50/167 (29%), Gaps = 19/167 (11%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + + + D A L
Sbjct: 22 GCAKKQV---------AATPESAGAPMAAEDDSARRAQLEALARA---------QQIITD 63
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + +L+ A +L KFPS + ++ H D GT + NL + + RA
Sbjct: 64 AKVYFDFDKFDLKAESKEVLKQKADVLKKFPSIRVLVEGHCDERGTQEYNLALGERRARA 123
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + + + + P + N+R E +I
Sbjct: 124 AYE-YLVMSGVNAGQLEMISYGEERPAVEGHNEAAWSKNRRGEFKII 169
>gi|149276320|ref|ZP_01882464.1| OmpA/MotB [Pedobacter sp. BAL39]
gi|149232840|gb|EDM38215.1| OmpA/MotB [Pedobacter sp. BAL39]
Length = 448
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + + IV ++ I + + + L +A +L + + + +
Sbjct: 322 RPIVTEKVIVTEADRRVVDEAIKNLEFDLGKATIRSTSFNTLNRVAALLVE-KNFSLKLA 380
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD+ G++ NL +S+ERA+ +K+YL+ +GV+++R + G+ PI TN T GRQ
Sbjct: 381 GHTDNTGSMALNLRLSKERAESVKAYLVSQGVNASR-VEATGYGPNQPIATNKTAAGRQQ 439
Query: 175 NQRIEIQI 182
N+R+E +
Sbjct: 440 NRRVEFTL 447
>gi|49474668|ref|YP_032710.1| peptidoglycan-associated lipoprotein [Bartonella quintana str.
Toulouse]
gi|49240172|emb|CAF26636.1| Peptidoglycan-associated lipoprotein [Bartonella quintana str.
Toulouse]
Length = 172
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 23/173 (13%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L L +F ++ GCG +K V N + + + F +L L
Sbjct: 12 LALVLFFSLSLVGCG-----RKYVGADGMNGSSLKSAGFNQAL----------LASGQDF 56
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD + + +E +L A L + PS I I+ H D GT +
Sbjct: 57 TVNVGDRV-------FFSLDSSSIEPDAEAVLIRQAQWLLRHPSYSIVIEGHADERGTRE 109
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + Q RA +++YLI GVSS R ++ + + P+ D N+R
Sbjct: 110 YNLALGQRRAVAVRNYLISLGVSSQRMQTIS-YGKERPVAVCDDISCWNQNRR 161
>gi|259416340|ref|ZP_05740260.1| OmpA family protein [Silicibacter sp. TrichCH4B]
gi|259347779|gb|EEW59556.1| OmpA family protein [Silicibacter sp. TrichCH4B]
Length = 784
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 14/161 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL--- 93
K + + + L V GD + + L +
Sbjct: 626 ANEAKDLEQYRSEFFGQLR-SLLGDQEGVRIEGDRFVF-ASEVLFALGSAELSEAGKTEI 683
Query: 94 ----PMLQLIATILNKFPSTVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQR 144
+LQ +A + + +I + HTD+ G +N +SQ RA + Y++
Sbjct: 684 AKVARILQNVAAAIPDDINWIIRVDGHTDNQRFSGTGKYADNWELSQGRALSVVRYMMDE 743
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ GF P++ DT R N+RIE+++ R
Sbjct: 744 LGIPPGRLAANGFGEFQPVNPADTPEARAQNRRIELKLTER 784
>gi|302879780|ref|YP_003848344.1| peptidoglycan-associated lipoprotein [Gallionella capsiferriformans
ES-2]
gi|302582569|gb|ADL56580.1| peptidoglycan-associated lipoprotein [Gallionella capsiferriformans
ES-2]
Length = 169
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 69/180 (38%), Gaps = 17/180 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L +S+ ++ ++ C + + D+V S T
Sbjct: 1 MKKLVISIVLLNLLAACASQKPHETAAPAPVAKAADVVTAPATS---------------T 45
Query: 62 GIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
V + D + V + + ++ P++Q A L++ + + ++ + D
Sbjct: 46 STEVDALNDPKSILAGRSVFYPFDVSAVQDADKPLVQAHAKYLSEHANRTVKLEGNCDER 105
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ + NL + Q RAD ++ L G + + SV + + P + N+R ++
Sbjct: 106 GSNEYNLGLGQRRADGVQKMLELGGAKAAQVTSVS-YGEEMPKAAGHDEASWSQNRRTDL 164
>gi|15891235|ref|NP_356907.1| omp16 protein [Agrobacterium tumefaciens str. C58]
gi|22653886|sp|Q8U9L5|OMP16_AGRT5 RecName: Full=Outer membrane lipoprotein omp16 homolog; Flags:
Precursor
gi|15159600|gb|AAK89692.1| omp16 protein [Agrobacterium tumefaciens str. C58]
Length = 177
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 30/181 (16%)
Query: 2 IKELG-----LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+++L ++M + ++GC
Sbjct: 12 MQKLARNPAVIAMTLALALAGCANKKNMPNSAGELGLGGAGSATPGSQQDF--------- 62
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+GD I + LQ A L+++P+ I ++ H
Sbjct: 63 --------TVNVGDRI-------FFDTDSTSIRADAQQTLQRQAQWLSRYPNYAITVEGH 107
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
D GT + NL + RA + +L +GV ++R ++ + + P+ D N+
Sbjct: 108 ADERGTREYNLALGARRAAATRDFLASQGVPASRMKTIS-YGKEKPVAVCDDISCWSQNR 166
Query: 177 R 177
R
Sbjct: 167 R 167
>gi|157374383|ref|YP_001472983.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157316757|gb|ABV35855.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
Length = 189
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 74/187 (39%), Gaps = 8/187 (4%)
Query: 2 IKELGLSMFIMTTISGC------GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+K+L LS + ++ + + DT + +K +
Sbjct: 1 MKQLMLSFLFIAGVTLSFSAFSWSDSDHDGVPDMKDACPDTRSGALVDAAGCEKQTEFEN 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L T V +P++ F + + L + L +F + +
Sbjct: 61 ICLSTTAGEVYPPSCSELSELPLNFEFA-KAEVMFSQWKTLARLKQFLQRF-DVNLCLLG 118
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+TD++G+L N +S +RA +K L++ S+ V+G + PI +N+ GR +N
Sbjct: 119 YTDAMGSLDLNQKLSAQRAMAVKQILVEDYGFSSSRFVVKGMGSESPIASNEKPEGRASN 178
Query: 176 QRIEIQI 182
+R+E +
Sbjct: 179 RRVEFVV 185
>gi|154252570|ref|YP_001413394.1| peptidoglycan-associated lipoprotein [Parvibaculum lavamentivorans
DS-1]
gi|154156520|gb|ABS63737.1| Peptidoglycan-associated lipoprotein [Parvibaculum lavamentivorans
DS-1]
Length = 166
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 52/181 (28%), Gaps = 27/181 (14%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ C D + + I
Sbjct: 9 RFAAVAAAFLMLAACSST--------------------------DDSANANPSSSSSGQI 42
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
D++ + L + LQ A + +P+ ++ H D GT
Sbjct: 43 TPGSQEDLVANVGDRVFFDTDQSSLSDEARATLQRQAAWMQLYPNLTFTVEGHADERGTR 102
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ NL + RA+ K YL+ GV R +V + + P+ + + N+R +
Sbjct: 103 EYNLALGGRRANSAKDYLVSLGVDGGRLNTVS-YGKERPVCLDSNENCWAQNRRAVTVVA 161
Query: 184 P 184
Sbjct: 162 S 162
>gi|93006335|ref|YP_580772.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
gi|92394013|gb|ABE75288.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
Length = 172
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 54/180 (30%), Gaps = 18/180 (10%)
Query: 3 KELGLSMFIMTTI--SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
K L++ + SGC + V V +D +
Sbjct: 7 KIAALAVLSSAVVLASGCATKRATSEVVVAPLGIPGGQVGYNGAVIVDNSNAVITGAENI 66
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + +L A +L P+ + I HTD
Sbjct: 67 QAV---------------VYFAFDSSAITSQSAGVLNQHAGLLKSNPNAGVVIAGHTDER 111
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ + N+ + + RA + YL + + I V + + P + N+R E+
Sbjct: 112 GSREYNIALGERRAQAARDYLAAQ-GVAANNIRVISYGEERPAAAGTNEDAYAQNRRAEL 170
>gi|260778540|ref|ZP_05887432.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260604704|gb|EEX30999.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 203
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 70/196 (35%), Gaps = 9/196 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + +S E + I +
Sbjct: 1 MKKAFFTLTAVACLLS--SATHAEDVYDYRQTPVPNQIADLLDDDKDGVINARDLCPDTP 58
Query: 61 TGIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
G + G + ++ FL ++ +A L +PST I +Q
Sbjct: 59 LGADIDNDGCGTYVKSEEEMDLHILFENDSSDIQPVFLTQIREMADFLKIYPSTSIELQG 118
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ +G +N+ +SQ RA+ ++S LI GVS R I + GF DT D ++ N
Sbjct: 119 YASKVGNHGHNMALSQRRAEEVESALINNGVSHTR-IRIVGFGDTNLADTGDDEITHAKN 177
Query: 176 QRIEIQIFP-RGNIKK 190
+++ + +G+IKK
Sbjct: 178 RKVVATVVGHKGSIKK 193
>gi|291613031|ref|YP_003523188.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
gi|291583143|gb|ADE10801.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
Length = 259
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 7/151 (4%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQ 97
N+ + +++ + VS+ G + I F E +E + L L
Sbjct: 95 QNESMQNLAKDLNASMASFVKNGQMNVSQTGRGVELEINASALFKQGEADIEPEALKTLA 154
Query: 98 LIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
A +L I ++ HTD S +N +S RA + I + + + +
Sbjct: 155 DAAKVLAGN-DFAIEVEGHTDNLPISTPKFPSNWELSSARASSVVRLFIDQ-GITAKRLK 212
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G A P+D+NDT GR N+R+ I +
Sbjct: 213 AVGSADNQPVDSNDTPEGRARNRRVTITVLN 243
>gi|161521534|ref|YP_001584961.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|189352297|ref|YP_001947924.1| chemotaxis MotB protein [Burkholderia multivorans ATCC 17616]
gi|160345584|gb|ABX18669.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
gi|189336319|dbj|BAG45388.1| chemotaxis MotB protein [Burkholderia multivorans ATCC 17616]
Length = 219
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 72/190 (37%), Gaps = 14/190 (7%)
Query: 6 GLSMFIMTTISGC--------GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
++ ++ ++ L +RE+ +V L + + + + +
Sbjct: 29 LITTLMVLFLALYVLQLAKFNALDARERTRVRLDDAAPARTAEPQAPARVPAWVAQLDAL 88
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
I + + I I + F + L LP+L+ IA L + I ++ H
Sbjct: 89 KAGGRISLVQAPHGIEIGIDAGILFHVGDAHLLPDALPVLERIAQALGPHAAGDILVEGH 148
Query: 117 TDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TDS+ ++N +S RA + YL +R + ++ G A P+ D R
Sbjct: 149 TDSVPIANAKYESNWELSSARAGAVVRYLAER-GIAPHRLAAVGRADTQPLVAGDDASSR 207
Query: 173 QNNQRIEIQI 182
N+R+ I +
Sbjct: 208 ARNRRVTIFV 217
>gi|49476137|ref|YP_034178.1| peptidoglycan-associated lipoprotein [Bartonella henselae str.
Houston-1]
gi|49238945|emb|CAF28242.1| Peptidoglycan-associated lipoprotein [Bartonella henselae str.
Houston-1]
Length = 174
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 62/173 (35%), Gaps = 21/173 (12%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + +F ++ GCG L N + N F Q L +
Sbjct: 12 LTVVLFFSLSLVGCGDKKNV---GALSGINGAFLNNAGFN----------QATLGSSQDF 58
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD + + +E +L A L ++P I I+ H D GT +
Sbjct: 59 TVNVGDRV-------FFSLDSSSIEPDAEAILMRQAEWLLRYPFYSIVIEGHADERGTRE 111
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + Q RA +++YLI S + I + + P+ D N+R
Sbjct: 112 YNLALGQRRAVAVRNYLISL-GVSAQRIQTISYGKERPVAVCDDISCWNQNRR 163
>gi|325068016|ref|ZP_08126689.1| OmpA/MotB domain protein [Actinomyces oris K20]
Length = 553
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 1/163 (0%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G A + K + + ++ + + A + + L D+ + D+
Sbjct: 200 GDAKKAKIDLSIAQAALKQSSHDVPELAAPVAIERYTRALDDSTSTHAGGKDITVTLASD 259
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVI 137
L L +A+ L + P + + HTD + N +S++RA+ +
Sbjct: 260 VTFASDSADLASGAEAQLNTVASQLKQHPDGGTLTVVGHTDDVQDDAYNQTLSEKRANAV 319
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
K+ L Q SV G P + + R N+R+EI
Sbjct: 320 KTRLEQLTSLDKWQTSVSGKGESEPKIKDTSDEARAANRRVEI 362
>gi|283955279|ref|ZP_06372779.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni 414]
gi|283793193|gb|EFC31962.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni 414]
Length = 165
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/184 (21%), Positives = 67/184 (36%), Gaps = 23/184 (12%)
Query: 1 MIKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L S+ + I SGC S SN R G +D +
Sbjct: 1 MKKILFTSIAALAVIISGCSTKSTSVSSDSSVDSNRG--SGGRDGWDIDSQISQLND--- 55
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTD 118
+ + + ++ A I N + I ++ + D
Sbjct: 56 ---------------TLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVNITVEGNCD 100
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N + +RA +K LI +GV+++R I+V+ + P+ T TK N+R
Sbjct: 101 EWGTDEYNQALGLKRAKAVKEALIAKGVNADR-IAVKSYGETNPVCTEKTKACDAQNRRA 159
Query: 179 EIQI 182
E ++
Sbjct: 160 EFKL 163
>gi|224418201|ref|ZP_03656207.1| lipoprotein precursor [Helicobacter canadensis MIT 98-5491]
gi|253827528|ref|ZP_04870413.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313141736|ref|ZP_07803929.1| lipoprotein [Helicobacter canadensis MIT 98-5491]
gi|253510934|gb|EES89593.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313130767|gb|EFR48384.1| lipoprotein [Helicobacter canadensis MIT 98-5491]
Length = 174
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 65/187 (34%), Gaps = 16/187 (8%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L S+ + GC S S V++ + D
Sbjct: 1 MKKSLVFGSLVAALLMVGCSQKSGNVGTSSAQDSTANQGVSQGYVGGRDNF--------- 51
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS--TVIAIQSHT 117
+ + + + + + ++ A +L + + ++ +T
Sbjct: 52 ---VNLEERIQYVEGGLQNVFFNFDQFVIRADMQNVVDNDANVLKDVSAAPLSVRVEGNT 108
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + N + +RA +K L+ +GVS ++ + V + P T T+ N++
Sbjct: 109 DEWGTDEYNYALGLKRAVAVKEALVAKGVSESKIVLVS-YGESKPTCTQKTRECWAENRK 167
Query: 178 IEIQIFP 184
+ ++ P
Sbjct: 168 VTFKMLP 174
>gi|329900833|ref|ZP_08272601.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium
IMCC9480]
gi|327549361|gb|EGF33931.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium
IMCC9480]
Length = 214
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ L+ L +A+ L VI HTDS+G+ N +S R++ +K+YL+ +
Sbjct: 112 KSVLKPDGKAKLDDLASKLQGMNLEVIIAVGHTDSVGSDAYNQKLSVRRSEAVKAYLVSK 171
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ G K P+ N + GR N+R+EI++
Sbjct: 172 -GIEANRVYTEGKGEKQPVADNKSAAGRAKNRRVEIEVV 209
>gi|254248921|ref|ZP_04942241.1| OmpA/MotB [Burkholderia cenocepacia PC184]
gi|124875422|gb|EAY65412.1| OmpA/MotB [Burkholderia cenocepacia PC184]
Length = 223
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 65/187 (34%), Gaps = 10/187 (5%)
Query: 5 LGLSMFIMTTISGCGL-ASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--EFQMQLQDT 61
+ +F+ + + + + L + + D A L+
Sbjct: 36 TLMVLFLALYVLQLAKYNALDARYQTLARQAGGAATAAVDTAKADPAPPWLALLDSLKSN 95
Query: 62 G-IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G I + + + I + F + L P+L IA L+ + I ++ HTDS
Sbjct: 96 GRISLVKAPHGVEIGIDAKILFNVGDARLLPDSSPVLNQIAQALSAHTTGDILVEGHTDS 155
Query: 120 IGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ ++N +S RA + + + ++ G A P+ D R N
Sbjct: 156 VPIANAKYESNWELSSARAGSVVR-YLTERGVAPHRLAAIGRADTQPLVAGDDAASRARN 214
Query: 176 QRIEIQI 182
+R+ I +
Sbjct: 215 RRVTIFV 221
>gi|302521646|ref|ZP_07273988.1| secreted protein [Streptomyces sp. SPB78]
gi|302430541|gb|EFL02357.1| secreted protein [Streptomyces sp. SPB78]
Length = 205
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 2/163 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + S + + +S + + ++ + +
Sbjct: 38 GSVTTSPPPDVDSSSPGLRLADGAQLASAKVLDIKSVVEDLGGEERREDTNTDVKFALQA 97
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V F + L+ ++ I K + + + TD++G+ + +S+ RAD++
Sbjct: 98 EVLFDKDKFALDPSGRARIKAIGEEAKKQRARTVRVFGFTDNLGSYAHGKTLSKRRADIV 157
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
L Q VRG++ YPI N T+ GR+ N+R+E+
Sbjct: 158 HDELAQYLGPEV-TFEVRGYSEDYPIADNTTEEGRRKNRRVEV 199
>gi|288818260|ref|YP_003432608.1| hypothetical protein HTH_0948 [Hydrogenobacter thermophilus TK-6]
gi|288787660|dbj|BAI69407.1| hypothetical protein HTH_0948 [Hydrogenobacter thermophilus TK-6]
gi|308751857|gb|ADO45340.1| OmpA/MotB domain protein [Hydrogenobacter thermophilus TK-6]
Length = 334
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++++++P+L + L + P+ + I+ +TD+IGT N ++ +RA +K
Sbjct: 228 FDFDKYSIKREYIPLLNEVVKTLKENPNVRVRIEGYTDNIGTKAYNDKLAMKRAKAVKD- 286
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + I GF + I +N+T +GR N+R + I
Sbjct: 287 YLVKHGIEESRIDTVGFGKERYIASNETAIGRFTNRRADFIIL 329
>gi|74095554|emb|CAJ27320.1| conserved hypothetical protein [Cronobacter sakazakii]
Length = 444
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 69/183 (37%), Gaps = 9/183 (4%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHK--SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
++ + GC +++F + + V + + + ++ + V
Sbjct: 263 ALLVAALFLGCKYYLSLPQELFRQQLLAMQRLHVTEPRPPERLRLAVLLKAEIARHWVSV 322
Query: 66 SRIGDMITCYI-PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL- 123
+ V + + + + +++ +A + + + I HTDS
Sbjct: 323 DESQRESRVIFHGDSMFAVGDASVRPERIDIIRRVAAEVQRVNG-EVVIIGHTDSTPIRS 381
Query: 124 ---KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+N +S++RA + +Y ++ + I+ +G PI +N GR N+R+EI
Sbjct: 382 GAFASNQALSEKRAQAVAAYFREQ-GIAPEKITSKGAGDTQPIASNHDAQGRSQNRRVEI 440
Query: 181 QIF 183
+
Sbjct: 441 FVT 443
>gi|170725705|ref|YP_001759731.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169811052|gb|ACA85636.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 190
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 69/194 (35%), Gaps = 14/194 (7%)
Query: 1 MIKE----LGLSMFIMTTISGCGLASREKKKVFLHKSNDT------DIVNKRFGSSLDKA 50
MIK LS+ ++ +S + + + D ++ + G +
Sbjct: 1 MIKRAGVCFILSIGLLFCLSASAWTWTDSDGDGVPDAKDACPETKVGVIVRSNGCGVQVD 60
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
D + D + ++ + + I L +
Sbjct: 61 TDRLCLPTLDEQFYPRTCTQATPLVLN---FEFAQAEVMFAQWQVFTRIKRFLQEH-DVK 116
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ + HTDS+G N+ +S RA +K L+ + V+G A +P+ +ND
Sbjct: 117 LCLLGHTDSVGAEAGNMALSHLRALNVKRILVDDLGFNPDRFQVKGMADTHPVASNDFPE 176
Query: 171 GRQNNQRIEIQIFP 184
GR N+R+E+ + P
Sbjct: 177 GRAMNRRVELFVEP 190
>gi|146306332|ref|YP_001186797.1| flagellar motor protein MotB [Pseudomonas mendocina ymp]
gi|145574533|gb|ABP84065.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 296
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 6/162 (3%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
++ V+++ S+ + Q +L + + + I + SF
Sbjct: 106 DAEAELQARAEAQVDQQVRDSVAALQQLLQGELSEGRLQLLEERRRIILRVEERGSFASG 165
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
L F ML ++ +L + P T + ++ HTD + ++N +S RA + +
Sbjct: 166 SAELTPAFEDMLLGMSELLVEIPGT-LTVEGHTDDVPISTARFRSNWDLSAARASAVANA 224
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + + V+GFA P ND+ R N+R+EI I
Sbjct: 225 LLLNPALEPQRLEVKGFADTRPRVANDSAQQRALNRRVEIII 266
>gi|330975320|gb|EGH75386.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 167
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 50/123 (40%), Gaps = 2/123 (1%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ S + I L+ + + L + A L + ++ +TD
Sbjct: 46 NSGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRSLDVHAKDLKAN-GARVVLEGNTD 104
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N+ + + RA ++ YL+ + S + + + + P+ T + + N+R+
Sbjct: 105 ERGTREYNMALGERRAKAVQRYLVLQ-GVSPAQLELVSYGEERPVATGNDEQSWAQNRRV 163
Query: 179 EIQ 181
E++
Sbjct: 164 ELR 166
>gi|206977733|ref|ZP_03238624.1| chemotaxis protein MotB [Bacillus cereus H3081.97]
gi|217961995|ref|YP_002340565.1| flagellar motor protein MotB [Bacillus cereus AH187]
gi|222097978|ref|YP_002532035.1| flagellar motor protein motb [Bacillus cereus Q1]
gi|206744034|gb|EDZ55450.1| chemotaxis protein MotB [Bacillus cereus H3081.97]
gi|217067135|gb|ACJ81385.1| chemotaxis protein MotB [Bacillus cereus AH187]
gi|221242036|gb|ACM14746.1| chemotaxis motB protein (Motility protein B) [Bacillus cereus Q1]
gi|324328404|gb|ADY23664.1| flagellar motor protein MotB [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 261
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 64/175 (36%), Gaps = 7/175 (4%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L S + KK ++ + + + + +
Sbjct: 83 LSASSLESEKIKKNA--EAEVKQQEMNELKAVQKGIDKYIEENRLSSSFKTDLTEKGLKV 140
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++ +L I + HTD++ +N +
Sbjct: 141 TILENVLFDSGKADVKLESLSIAKEMSNLLVSASPREITVSGHTDNVPIANAQFASNWEL 200
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 201 STQRAVNFMQVLLQNKELQPGKFSAVGYGEYRSIAPNDTQEGKAKNRRVEVFILP 255
>gi|332716442|ref|YP_004443908.1| outer membrane lipoprotein omp16 [Agrobacterium sp. H13-3]
gi|325063127|gb|ADY66817.1| outer membrane lipoprotein omp16 [Agrobacterium sp. H13-3]
Length = 177
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 56/181 (30%), Gaps = 30/181 (16%)
Query: 2 IKELG-----LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+++L ++M + ++GC
Sbjct: 12 MQKLARNPAVIAMTLALALAGCANKKNMPNSAGELGLGGAGSATPGSQQDF--------- 62
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+GD I + LQ A L ++P I ++ H
Sbjct: 63 --------TVNVGDRI-------FFDTDSTSIRADAQQTLQRQAQWLARYPKYAITVEGH 107
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
D GT + NL + RA + +L +GV ++R ++ + + P+ D N+
Sbjct: 108 ADERGTREYNLALGARRAAATRDFLASQGVPASRMKTIS-YGKEKPVAVCDDISCWSQNR 166
Query: 177 R 177
R
Sbjct: 167 R 167
>gi|254381948|ref|ZP_04997311.1| secreted protein [Streptomyces sp. Mg1]
gi|194340856|gb|EDX21822.1| secreted protein [Streptomyces sp. Mg1]
Length = 262
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 72/197 (36%), Gaps = 16/197 (8%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE------------- 51
+GL + + + + K + + + +
Sbjct: 64 VGLVIAGAHFMGAASAHADDVKPSTPPGTEASASPPVAVKPDSPRLKLPQGGVLAAPKVL 123
Query: 52 --DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E L ++ + + +Q IA +N+ +T
Sbjct: 124 DMVEVVEDLGGEQRRQETNQTVMMALQSEVLFPEDSSVFNAQAAARIQAIANEINQQKAT 183
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ + TD G+ ++ +S++RAD ++ L + + + VRG++ YPI N T+
Sbjct: 184 RVRVFGFTDDQGSYEHGKELSKKRADAVQVELAKTVTNPSVIFDVRGYSEDYPIADNGTE 243
Query: 170 VGRQNNQRIEIQIFPRG 186
GR+ N+R+EI FPRG
Sbjct: 244 EGRKKNRRVEIT-FPRG 259
>gi|71282150|ref|YP_271418.1| ompA family protein [Colwellia psychrerythraea 34H]
gi|71147890|gb|AAZ28363.1| ompA family protein [Colwellia psychrerythraea 34H]
Length = 367
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
++ + G V + ++ +++K+ P++ +A + +P + I+
Sbjct: 233 DKVNEVGCTVFTEAQDTVELLIN--FDSNKAVVKEKYKPIMVKVAKFMEAYPDLSLTIKG 290
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
H+ + G+ N +S +RA + LI ++ G+ ++T++T + N
Sbjct: 291 HSSAKGSAAYNQTLSAKRAQAVVDVLINDFGVDASRLNSIGYGESELLNTDNTAAAHEQN 350
Query: 176 QRIEIQIFPRGNIKK 190
+RIE I + +
Sbjct: 351 RRIEATISTTNKVAE 365
>gi|261855938|ref|YP_003263221.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261836407|gb|ACX96174.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 207
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ L + + + S I + +TDSIGT K N+ +S+ RA+
Sbjct: 97 DTYFDFDKYNLKPAGKEALDKLISEMGDMNSIAKIKVVGYTDSIGTEKYNIGLSERRANT 156
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ + I +G P+ +N TK GR N+R+ + G
Sbjct: 157 VAK-YLTAHNIPADKIETQGMGEADPVASNKTKEGRAKNRRV--VVTTEG 203
>gi|186896079|ref|YP_001873191.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
PB1/+]
gi|186699105|gb|ACC89734.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 560
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 81 SFVSEVF---LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
F S L + M+ + +++ + I I H+D+ G+ N+ +S++RA +
Sbjct: 441 LFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHSDNTGSSSMNMTLSEQRALAL 500
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +LI+R + +G P+ TN T+ GR+ N+R+E+ I P +
Sbjct: 501 RDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQD 550
>gi|51596997|ref|YP_071188.1| OMPA family outer membrane porin [Yersinia pseudotuberculosis IP
32953]
gi|51590279|emb|CAH21916.1| putative OMPA family outer membrane porin [Yersinia
pseudotuberculosis IP 32953]
Length = 560
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 81 SFVSEVF---LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
F S L + M+ + +++ + I I H+D+ G+ N+ +S++RA +
Sbjct: 441 LFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHSDNTGSSSMNMTLSEQRALAL 500
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +LI+R + +G P+ TN T+ GR+ N+R+E+ I P +
Sbjct: 501 RDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQD 550
>gi|153947393|ref|YP_001400334.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP
31758]
gi|170023708|ref|YP_001720213.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
YPIII]
gi|152958888|gb|ABS46349.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
gi|169750242|gb|ACA67760.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
Length = 560
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 81 SFVSEVF---LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
F S L + M+ + +++ + I I H+D+ G+ N+ +S++RA +
Sbjct: 441 LFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHSDNTGSSSMNMTLSEQRALAL 500
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +LI+R + +G P+ TN T+ GR+ N+R+E+ I P +
Sbjct: 501 RDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQD 550
>gi|171463096|ref|YP_001797209.1| peptidoglycan-associated lipoprotein [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171192634|gb|ACB43595.1| peptidoglycan-associated lipoprotein [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 166
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 52/177 (29%), Gaps = 26/177 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L I+ C + + S ++ + ++
Sbjct: 12 FALIGATALLIAACSSVKLDDTDGA-NGSGSGKFGSQPWNDPSSPLFEK----------- 59
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
E ++ K+ ML A L P I IQ + D GT +
Sbjct: 60 -------------SVYFGFDEYTVQTKYQKMLSAHAGYLKANPKQKIIIQGNADERGTAE 106
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL + Q R+D + + S+ + F + P D + N+R +I
Sbjct: 107 YNLALGQRRSDAVCK-SLNLIGVSDDQMEAVSFGKEKPKAEGDNEAAWAENRRADIV 162
>gi|88861313|ref|ZP_01135944.1| outer membrane protein [Pseudoalteromonas tunicata D2]
gi|88816692|gb|EAR26516.1| outer membrane protein [Pseudoalteromonas tunicata D2]
Length = 178
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 66/181 (36%), Gaps = 9/181 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +MT ++ C +S + + A ++ +
Sbjct: 6 ILKGLLIAVPVMT-LAACSSSSNVDEGASQQNQTNQAQQTTDTVQVETIAREKTAEEKLR 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
R +I + ++ +LQ A L PS + I+ H D
Sbjct: 65 EKYEALRQEQVI-------YFDFDTAIVSSQYADLLQAHANFLVVNPSVKVLIEGHADER 117
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + R D + +YL S +SV + + P+ + + N+R +
Sbjct: 118 GTPEYNIALGERRGDAVVTYLQSL-GVSASQLSVVSYGEEKPMVKSRNEEAFAKNRRAVL 176
Query: 181 Q 181
Sbjct: 177 V 177
>gi|213969192|ref|ZP_03397331.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tomato T1]
gi|213926190|gb|EEB59746.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tomato T1]
Length = 151
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 57/173 (32%), Gaps = 26/173 (15%)
Query: 12 MTTISGCGLASREKKKV---FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
M GC + + GS + E +
Sbjct: 1 MAVAVGCSSKGGDNAGAGGAVDPNAGYGANTGAVDGSLSE--EAALRA------------ 46
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
I L+ + + L + A L + ++ +TD GT + N+
Sbjct: 47 -------ITTFYFEYDSSDLKPEAMRSLDVHAKDLKAN-GARVVLEGNTDERGTREYNMA 98
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + RA ++ YL+ + S + + + + P+ T + + N+R+E++
Sbjct: 99 LGERRAKAVQRYLVLQ-GVSPAQLELVSYGEERPVATGNDEQSWAQNRRVELR 150
>gi|294341056|emb|CAZ89451.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Thiomonas sp. 3As]
Length = 182
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 68/165 (41%), Gaps = 5/165 (3%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC K+ + T + G++ + A +Q + G +
Sbjct: 20 GCAS-PVPVKQAPVESKAPTAVEGGTAGANANGAGQNQVAAVQAPAETNAGPGPNVP--- 75
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ +E ++ P+L AT L + P + +Q +TD+ G+ + NL + Q+RAD
Sbjct: 76 KSVYFAFNSYTVESQYTPVLNANATYLTQHPQAHVQLQGNTDARGSREYNLALGQKRADA 135
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + GV ++ ++ + + P +T+ N+R++I
Sbjct: 136 VMKGMELLGVKPSQMEAIS-YGKEKPKALGNTEADYAENRRVDIV 179
>gi|254229410|ref|ZP_04922826.1| OmpA family protein [Vibrio sp. Ex25]
gi|262396871|ref|YP_003288724.1| outer membrane protein [Vibrio sp. Ex25]
gi|151938101|gb|EDN56943.1| OmpA family protein [Vibrio sp. Ex25]
gi|262340465|gb|ACY54259.1| outer membrane protein [Vibrio sp. Ex25]
Length = 205
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 76/197 (38%), Gaps = 12/197 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L +++ ++ ++ K ++ + + D + +
Sbjct: 1 MKKNLLITLALVIM---SHHSAYAKDELAYIPIPKANQIADLNDLDKDGVINA-RDLCAG 56
Query: 61 T--GIVVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
T G V G + + + F + +A L K+P+T I I
Sbjct: 57 TPIGAEVDNDGCETYLHKEEQYQLKILFDNDSALINQIFKNKIDGLAAFLKKYPTTSIEI 116
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
Q + +G + NL +S+ RA+ +++ LI++G+ +R +++ F + +V
Sbjct: 117 QGYASKVGRAEYNLNLSRHRAENVRNLLIEKGIPGDR-LAIIAFGDTQLAEPGMDRVSHA 175
Query: 174 NNQRIEIQIFPRGNIKK 190
N+R+ + + + K
Sbjct: 176 LNRRVTATVVGQQGMVK 192
>gi|123442919|ref|YP_001006894.1| hypothetical protein YE2703 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089880|emb|CAL12736.1| putative membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 556
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 80 VSFVSEVFLEKKFL--PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + L+ L + ++ + + I H+D+ G+ N+ IS++RA V+
Sbjct: 442 MFDSNSIKLKPNAQTNETLASLLLLVEQHQGRKVLIIGHSDNTGSASFNMTISEQRAVVV 501
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +LI+ + +RG P+ +NDT G+ N+R+E+ + P
Sbjct: 502 RDWLIKNSALAKEDFIIRGMGALEPVASNDTPAGQDQNRRVEVLLLP 548
>gi|91204944|ref|YP_537299.1| peptidoglycan-associated lipoprotein precursor [Rickettsia bellii
RML369-C]
gi|157827728|ref|YP_001496792.1| peptidoglycan-associated lipoprotein precursor [Rickettsia bellii
OSU 85-389]
gi|91068488|gb|ABE04210.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia bellii
RML369-C]
gi|157803032|gb|ABV79755.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia bellii
OSU 85-389]
Length = 155
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 56/183 (30%), Gaps = 33/183 (18%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K ++ L++ + ++GC K K H +K
Sbjct: 1 MKITKITLAVLALFVLAGC-----NKNKRASHSCAMNQSEETSIMKDFEKQAG------- 48
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ L +K LQ A L++ P ++ H D
Sbjct: 49 -----------------NAVWFAFNSSALSEKAKEELQRQACWLSRHPHVKATVEGHCDD 91
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-I 178
GT + NL + + RA +L + + +S + +T+ N+R +
Sbjct: 92 RGTREYNLALGERRAQKAAEFLRHK-GIEHHRVSTISYGKDRLAMMGNTEEAHAYNRRAV 150
Query: 179 EIQ 181
+
Sbjct: 151 TVV 153
>gi|256820420|ref|YP_003141699.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256582003|gb|ACU93138.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 290
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 5/133 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L D + + ++ I + F + K +L+ +A ++ P ++ H
Sbjct: 136 LDDQDVDIKVEKGVVFINISDKMLFSSGSYTISKNAKSVLEKVAKVVKNKPDFEFMVEGH 195
Query: 117 TDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD+ +++N +S RA I L + + ++ G +Y P+ +N GR
Sbjct: 196 TDNVNIKTSCIRDNWDLSVMRATEIVRVLQKDFGVAPERMTAAGRSYYVPLASNGDANGR 255
Query: 173 QNNQRIEIQIFPR 185
N+R I I P+
Sbjct: 256 ALNRRTRIVILPK 268
>gi|197295086|ref|YP_002153627.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
gi|195944565|emb|CAR57169.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
Length = 220
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 63/219 (28%), Gaps = 38/219 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASR--------EKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
M K + + + +++ C AS + + D + + + A
Sbjct: 1 MKKHHLVLLASVVSLTACSSASGPTYNAYELQSRNGIRTFQVDCHGILSTAKTCMKVATR 60
Query: 53 EFQMQ---LQDTGIVVSRIGDMITCYIP--------------------------VHVSFV 83
+ L DT D +
Sbjct: 61 MCGNEPVRLVDTTTPYRDGADPHSIVFQCGAAPAPAAAAVAPAPAPVEKVSLTGDAYFAT 120
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L L + + + +TD+ G+ +N +S+ RAD + + ++
Sbjct: 121 DSAVLTPAATATLDKLLNQQGDRHFARVEVDGYTDATGSDAHNQALSKRRADAV-AGYLR 179
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G P +NDT GR N+R+EI +
Sbjct: 180 EHGLKADSFAANGHGEANPAASNDTVEGRARNRRVEISL 218
>gi|154687112|ref|YP_001422273.1| flagellar motor protein MotS [Bacillus amyloliquefaciens FZB42]
gi|154352963|gb|ABS75042.1| YtxE [Bacillus amyloliquefaciens FZB42]
Length = 229
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 65/194 (33%), Gaps = 17/194 (8%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS-----------LDKAEDE 53
+ L + + EK + + + + S L +
Sbjct: 31 ITLILVFFILLFSMSQIDAEKFQSAVSSIHTNGSGGEPASSDKANENKEQDLLLQNVKTY 90
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ + + R + + V F + + K P+L IA +L P+ I
Sbjct: 91 IKAHHLSSKLTAKRDERGVVLVLQEAVLFQTGKADVLKNAEPVLHQIAVLLKTIPN-DIQ 149
Query: 113 IQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++ HTDS +N +S RA + Y S + G+A P+ N +
Sbjct: 150 VEGHTDSRRISTYQFPSNWELSSARAASVIRYFTANEDFSAKRFISAGYADTKPVKDNKS 209
Query: 169 KVGRQNNQRIEIQI 182
+ N+R+EI I
Sbjct: 210 PGHMKENRRVEIVI 223
>gi|330955558|gb|EGH55818.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 265
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 3/145 (2%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE--VFLEKKFLPML 96
K + LD+ E + ++D+ + R D++ PV SF + L L +
Sbjct: 87 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVDSSFNPDRPAMLLPNTLGPI 146
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++ T + I H D+ G + N ISQERA + + +S RG
Sbjct: 147 TRLAKVVEGDQKTAVLILGHADTSGPTEANQKISQERAQSVAAIFRL-SGLERNRLSQRG 205
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQ 181
P ND+ GR N+R+EI
Sbjct: 206 MGAVMPRAANDSLQGRALNRRVEIL 230
>gi|293392950|ref|ZP_06637267.1| OmpA family protein [Serratia odorifera DSM 4582]
gi|291424484|gb|EFE97696.1| OmpA family protein [Serratia odorifera DSM 4582]
Length = 165
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 57/181 (31%), Gaps = 29/181 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + + ++GC + E LQ G
Sbjct: 13 LAMMFIAVLALAGCQSKPQ-------------------------GLTAEQVALLQAQGFK 47
Query: 65 VSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
++ G + V F + + L +Q + L + HTD+ G
Sbjct: 48 LTDNGWE--FGMSDKVLFGNNIGKLNPASTETVQKMGRALLSVDIVKFRLDGHTDNYGED 105
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S RA+ + L+ I RG + P+ N T GR N+R+ I +
Sbjct: 106 SYNDRLSLRRANAVAD-LLASVGIPRANIETRGRGKRDPVADNRTASGRAENRRVSIIVT 164
Query: 184 P 184
P
Sbjct: 165 P 165
>gi|253998106|ref|YP_003050169.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4]
gi|253984785|gb|ACT49642.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4]
Length = 170
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 65/178 (36%), Gaps = 22/178 (12%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L+ + T+S C + + + L++ G V
Sbjct: 13 LLAFTLSLTLSACKSTPAAPAQ--------------------ETLRQKQIRTLKEQGFVH 52
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ G ++ + ++ L + +Q ++ L + I+ H D+ G
Sbjct: 53 TDDGWALSF-ADKLLFDTNQAVLNDRSRGAVQKVSKALQSVGLDKMRIEGHADATGRESY 111
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N+ +S++RA + I + I VRG + P+ +N T GR N+R+ I +
Sbjct: 112 NVELSEQRAWAVADAFI-QSGMPKSGIIVRGMGSQSPVASNATVAGRAENRRVSIIVV 168
>gi|298717317|ref|YP_003729959.1| OmpA-family outer membrane protein YfiB [Pantoea vagans C9-1]
gi|298361506|gb|ADI78287.1| Putative OmpA-family outer membrane protein precursor yfiB [Pantoea
vagans C9-1]
Length = 157
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 53/139 (38%), Gaps = 1/139 (0%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
S + D ++ G + G + + V+E L +Q +A L
Sbjct: 18 QSKARFSDAQIAAMKSAGFTQNMEGWGLGLS-DKILFGVNESELTPSSKLTIQGMAKNLA 76
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I HTD+ G N +S +RA+ + + + I RG P+
Sbjct: 77 STGIKHVRIDGHTDNYGKPDYNQQLSLKRANAVAAQWAEGAAIPRENIVTRGLGMSSPVA 136
Query: 165 TNDTKVGRQNNQRIEIQIF 183
+N++ GR N+R+ I I
Sbjct: 137 SNNSAQGRAQNRRVAIVIT 155
>gi|293397221|ref|ZP_06641494.1| peptidoglycan-associated lipoprotein [Serratia odorifera DSM 4582]
gi|291420241|gb|EFE93497.1| peptidoglycan-associated lipoprotein [Serratia odorifera DSM 4582]
Length = 179
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 16/164 (9%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + T + + S ++ +LQ I
Sbjct: 31 CSSNKSADNDQSGVGAGGTGMESGSSNLSSEEQARLQMQELQKNNI-------------- 76
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + +F ML AT L PS + ++ H D GT + N+ + + RA+ +
Sbjct: 77 -VYFGLDKYDISSEFAQMLDAHATFLRNNPSYKVTVEGHADERGTPEYNIALGERRANAV 135
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+Q S IS+ + + P + N+R +
Sbjct: 136 -KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLV 178
>gi|157960903|ref|YP_001500937.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157845903|gb|ABV86402.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 365
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 62/169 (36%), Gaps = 5/169 (2%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM-QLQDTGIVVSRI-GDMITCYIPVH 79
S+ K + D N +D+ + ++ G + + D
Sbjct: 196 SKSKPAPVVAPVIVADSDNDGVTDDMDQCPNTPSTHKVDANGCTIYQEAEDKFDIEAK-- 253
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ +++ ++ +A +++ P+ + I H + G N+ +S+ RA +
Sbjct: 254 -FATNSATVQESSYGDIKELAEYMSQHPNAEVTISGHASNTGKADYNMALSERRAAAVAE 312
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
LI ++ +S +G+ P+ + + N+RIE + +
Sbjct: 313 ILINEYGVASSKVSSKGYGITQPLIEGSSAEANEANRRIEAHVTGTEEV 361
>gi|41059077|gb|AAR98873.1| outer membrane protein [Helicobacter pylori]
Length = 179
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 60/180 (33%), Gaps = 7/180 (3%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + I+GC ++ + ++ +K E + +
Sbjct: 1 MKRSSVFSFLVAFLFIAGCKHNMDKETVAGDVSAKAVQSAPVSTETAQEKQEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCTQKTRECYRENRRVD 174
>gi|318057618|ref|ZP_07976341.1| secreted protein [Streptomyces sp. SA3_actG]
Length = 196
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 2/163 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + S + + +S + + ++ + +
Sbjct: 29 GSVTTSPPPDVDSSSPGLRLADGAQLASAKVLDIKSVVEDLGGEERREDTNTDVKFALQA 88
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V F + L+ ++ I K + + + TD++G+ + +S+ RAD++
Sbjct: 89 EVLFDKDKFALDPSGRARIKAIGEEAKKQRARTVRVFGFTDNLGSYAHGKTLSKRRADIV 148
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
L Q VRG++ YPI N T+ GR+ N+R+E+
Sbjct: 149 HDELAQYLGPEV-TFEVRGYSEDYPIADNTTEEGRRKNRRVEV 190
>gi|78061841|ref|YP_371749.1| hypothetical protein Bcep18194_B0991 [Burkholderia sp. 383]
gi|77969726|gb|ABB11105.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 434
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 7/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
+ + ++ + V F ++ P++ IA + K P
Sbjct: 297 LKQLLKDEIAAGTVSVDEDARHSAVTFRGDAMFKPGGASVQASMNPLILKIAGEVAKVPG 356
Query: 109 TVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I +TD++ +N ++S+ERA + L GV ++R + G P+
Sbjct: 357 -KVTIIGYTDNVPIRSRHFASNQVLSEERAIQVMQMLQAAGVPASR-LEAVGKGDTDPVG 414
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T GR N+R+EI +
Sbjct: 415 DNRTAQGRAQNRRVEIDV 432
>gi|254495661|ref|ZP_05108581.1| outer membrane protein [Legionella drancourtii LLAP12]
gi|254355112|gb|EET13727.1| outer membrane protein [Legionella drancourtii LLAP12]
Length = 235
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 70/175 (40%), Gaps = 3/175 (1%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ T + G A+ L + ++ + + + LQ I +
Sbjct: 41 ATIGATMGTAIGAATTGTLPGALAGTAIGGVIGAVVNTGTNP-KGRIIRTLQRCDIQFIQ 99
Query: 68 IGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
GD +T IP F+ E L + LQ I +L +P + + + TD++GT +
Sbjct: 100 YGDTMTLNIPTDKYFMFESPRLNEINYKGLQNIIALLRLYPESHVYVAGFTDNVGTEDHK 159
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+SQ +A+ + +YL + + G+ K + N G N+RIEIQ
Sbjct: 160 KRLSQAQAESMMTYLWAN-GIQAQRLKPEGYGDKNTVADNALIHGSAMNRRIEIQ 213
>gi|228923254|ref|ZP_04086544.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228954780|ref|ZP_04116801.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228960776|ref|ZP_04122414.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229048216|ref|ZP_04193785.1| OmpA/MotB domain protein [Bacillus cereus AH676]
gi|229111973|ref|ZP_04241517.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15]
gi|229129795|ref|ZP_04258762.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4]
gi|229147069|ref|ZP_04275429.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24]
gi|229152704|ref|ZP_04280891.1| OmpA/MotB domain protein [Bacillus cereus m1550]
gi|229180776|ref|ZP_04308114.1| OmpA/MotB domain protein [Bacillus cereus 172560W]
gi|229192709|ref|ZP_04319668.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876]
gi|228590799|gb|EEK48659.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876]
gi|228602754|gb|EEK60237.1| OmpA/MotB domain protein [Bacillus cereus 172560W]
gi|228630767|gb|EEK87409.1| OmpA/MotB domain protein [Bacillus cereus m1550]
gi|228636457|gb|EEK92927.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24]
gi|228653711|gb|EEL09582.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4]
gi|228671537|gb|EEL26837.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15]
gi|228723203|gb|EEL74579.1| OmpA/MotB domain protein [Bacillus cereus AH676]
gi|228798911|gb|EEM45887.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228804900|gb|EEM51498.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228836460|gb|EEM81811.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 234
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 67/175 (38%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L + + KK ++ + + K + + + +
Sbjct: 55 LSASSLEAEQAKKQEEARAKE-KKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 113
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I ++ F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 114 TILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWEL 173
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 174 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 228
>gi|307727734|ref|YP_003910947.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307588259|gb|ADN61656.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 321
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 61/159 (38%), Gaps = 2/159 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF 82
+ ++ + + ++ S + A + + S G T
Sbjct: 161 DGTQIDVKGEVRNESQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFE 220
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + +L +A + K + +AI HTD+ G +N+ +SQ RAD + +
Sbjct: 221 TGSATLTAQGRAILDQMAAAMQKMTTRTVAIIGHTDNSGNRTSNIALSQARADAV-KGYL 279
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ ++ G PI TNDT GR N+RIE +
Sbjct: 280 VAKGIPPQQMTTTGVGPDQPIATNDTADGRARNRRIEFR 318
>gi|256828401|ref|YP_003157129.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum
DSM 4028]
gi|256577577|gb|ACU88713.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum
DSM 4028]
Length = 179
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 62/184 (33%), Gaps = 13/184 (7%)
Query: 2 IKEL----GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+K+L + + ++G + D + G + ++ E + +
Sbjct: 1 MKKLGVFGLIVLVFCLAMAGGCSKKVSSTPAGATAAGAGDGSGAQGGLTAEQLEAQRLAE 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
LQ I L ++ +L A +L P+ + I+ H
Sbjct: 61 LQRQAIE--------KIGADKIYFAFDSNELTQESRQVLTDKAELLKANPALSLLIEGHC 112
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + + RA +L+ + + + + +YP + N+R
Sbjct: 113 DERGTNEYNLALGERRARAAYEFLVLL-GIDSSKLQIISYGEEYPAVQGSNEDAWGKNRR 171
Query: 178 IEIQ 181
E +
Sbjct: 172 DEFK 175
>gi|103485822|ref|YP_615383.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
gi|98975899|gb|ABF52050.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
Length = 170
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 58/178 (32%), Gaps = 19/178 (10%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
++ M + C + + + + G ED
Sbjct: 9 MIAAITMLAVGACAKKAPDTLPPAPEGAGTDTTTDTGTGVVPGSQEDFVAN--------- 59
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ ++ + LQ A L + P+ + ++ H D GT
Sbjct: 60 --------VASDRIFFDFDQYNVDAQDQATLQSQAQWLQRNPAVRVTLEGHADERGTRDY 111
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IEIQI 182
N+ + + RA+ K+YL G+ +R I+V + + P + N+R + + I
Sbjct: 112 NIALGERRANAAKNYLASLGIDPSR-INVISYGKERPAAIGSNEEAWAQNRRAVTVVI 168
>gi|332521031|ref|ZP_08397491.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332043561|gb|EGI79757.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 638
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + + ++ LQ + LN++PS I +QSHTDS G N +SQ
Sbjct: 520 VLLDLNPIYFDFDKSYIRPDAQVELQKVINYLNEYPSVSIDVQSHTDSRGRDAYNKSLSQ 579
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTND---TKVGRQNNQRIEIQIFPR 185
R K+++I++G S IS RG+ + +N ++ Q N+R +
Sbjct: 580 RRNTSTKNWIIEKGKISKSRISGRGYGETQLVNRCSNGVKCSEEEHQQNRRSMFIVTKN 638
>gi|149928286|ref|ZP_01916529.1| OmpA/MotB [Limnobacter sp. MED105]
gi|149823015|gb|EDM82257.1| OmpA/MotB [Limnobacter sp. MED105]
Length = 218
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L++ + L + + HTDSIG+ N +S+ RA +
Sbjct: 107 DAYFDFDKATLKQGGKDRIDSEIAKLGQVDLNSVIAIGHTDSIGSDAYNQKLSERRAQAV 166
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
K Y++ +GVS++R I ++G P+ N T+ GR N+R+EI+ + K
Sbjct: 167 KDYMVSKGVSADR-IQIKGMGESQPVADNKTREGRAKNRRVEIEFNATQKVAK 218
>gi|83644283|ref|YP_432718.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83632326|gb|ABC28293.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 169
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 53/188 (28%), Gaps = 25/188 (13%)
Query: 2 IKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K L L + +S C + E + E
Sbjct: 1 MKNLSKFSLLAAAVIGLSACASSQPEPVVEEPVVIEPAQPEPVVEPAPEPVVEAAPAPS- 59
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ LQ A+ + + + + H D
Sbjct: 60 ------------------ANIEFAFDSSKIGPGEQSDLQQWASYIQEGAYNRVEVHGHAD 101
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ N +S +RA+ L F+ V + P+ N + GRQ N+R+
Sbjct: 102 DTGSADYNRKLSADRANSTVQALRNLVSGQVDFV-VVPHGEEQPLAENSDEQGRQLNRRV 160
Query: 179 EIQIFPRG 186
EI P+G
Sbjct: 161 EIV--PQG 166
>gi|228974615|ref|ZP_04135181.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981210|ref|ZP_04141510.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407]
gi|228778410|gb|EEM26677.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407]
gi|228785018|gb|EEM33031.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
Length = 234
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 67/175 (38%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L + + KK ++ + + K + + + +
Sbjct: 55 LSASSLEAEQAKKQEEARAKE-KKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 113
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I ++ F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 114 TILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWEL 173
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 174 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 228
>gi|196039232|ref|ZP_03106538.1| chemotaxis protein MotB [Bacillus cereus NVH0597-99]
gi|218905736|ref|YP_002453570.1| chemotaxis protein MotB [Bacillus cereus AH820]
gi|225866485|ref|YP_002751863.1| chemotaxis protein MotB [Bacillus cereus 03BB102]
gi|196029859|gb|EDX68460.1| chemotaxis protein MotB [Bacillus cereus NVH0597-99]
gi|218538809|gb|ACK91207.1| chemotaxis protein MotB [Bacillus cereus AH820]
gi|225788965|gb|ACO29182.1| chemotaxis protein MotB [Bacillus cereus 03BB102]
Length = 262
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S E+ K + K + + + +
Sbjct: 83 LSA-SSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 141
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 142 TILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWEL 201
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 202 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 256
>gi|326795346|ref|YP_004313166.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326546110|gb|ADZ91330.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 254
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 65/164 (39%), Gaps = 6/164 (3%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+ K D+ + + ++F + D+ I V G+ IT + F
Sbjct: 85 TNDDLTYSKEPIDDVEREHVKEIANDTANKFAAENLDSQIAVFEDGEKITIRVDGASLFE 144
Query: 84 -SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIK 138
E + P+ + + I +P I+I+ HTD+I N +S RA
Sbjct: 145 SGEADVLWSAEPIFEALYRIFVTYPDYNISIKGHTDNIPINTTRFPSNWELSAIRATTTL 204
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
Y +++G+ R + G+A P+ NDT R N+R E +
Sbjct: 205 RYFLEKGIPPERM-TATGYADVIPLVPNDTPEHRAQNRRAEFVL 247
>gi|237800227|ref|ZP_04588688.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|237806415|ref|ZP_04593119.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331023084|gb|EGI03141.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331027528|gb|EGI07583.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 167
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 50/123 (40%), Gaps = 2/123 (1%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ S + I L+ + + L + A L + ++ +TD
Sbjct: 46 NSGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKAN-GARVVLEGNTD 104
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N+ + + RA ++ YL+ + S + + + + P+ T + + N+R+
Sbjct: 105 ERGTREYNMALGERRAKAVQRYLVLQ-GVSPAQLELVSYGEERPVATGNDEQSWAQNRRV 163
Query: 179 EIQ 181
E++
Sbjct: 164 ELR 166
>gi|320095241|ref|ZP_08026939.1| outer membrane protein OprF [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319977825|gb|EFW09470.1| outer membrane protein OprF [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 174
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
D + F + D + ++ + + V+F L + +L +A+ +K
Sbjct: 39 DPVKVVFSVATVDGAVSMAEQQNATVTTLSGDVNFEVDSDQLTARAKEVLDSLASEWSKA 98
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ + + HTDS+ +NL +S+ RA + YL + + ++ G PI N
Sbjct: 99 KPSTVTVTGHTDSVADDAHNLDLSKRRAKAVGDYLAGKVPGLS--LTTDGKGEAEPIGDN 156
Query: 167 DTKVGRQNNQRIEIQ 181
+T+ GR N+R+EI+
Sbjct: 157 ETEEGRAQNRRVEIR 171
>gi|296445979|ref|ZP_06887929.1| peptidoglycan-associated lipoprotein [Methylosinus trichosporium
OB3b]
gi|296256497|gb|EFH03574.1| peptidoglycan-associated lipoprotein [Methylosinus trichosporium
OB3b]
Length = 167
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 49/184 (26%), Gaps = 28/184 (15%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ ++ +I+ C + E + L
Sbjct: 11 RVVAALTAALSIAACAKNASEDENAALAGRGGYAAPGSPQD------------------- 51
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V +GD I L L L ++ ++ H D GT
Sbjct: 52 FVVNVGDRI-------YFETDSSELTSTAQTTLDKQVDWLQRYGRYSFTVEGHADERGTR 104
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N + RA+ + + S I + + P+ D N+R + +
Sbjct: 105 EYNFALGARRAE-VAKNYLVSRGLSAARIRTISYGKERPVAVCDDISCWSQNRRA-VTVL 162
Query: 184 PRGN 187
GN
Sbjct: 163 GGGN 166
>gi|298529291|ref|ZP_07016694.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298510727|gb|EFI34630.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 359
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
++ ++ +L A + + ++ HT +IG N+ +SQ R
Sbjct: 251 IVFSNIQFDFDSAAIKDEYAEILNEAARQIQDRTDPHVVVEGHTCNIGPEDYNMELSQRR 310
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
AD + YL+++ I P NDT+ GRQ N+R+E+++
Sbjct: 311 ADSVADYLVEQ-GVDEDAIDTEAHGLTRPEFDNDTREGRQLNRRVEMRL 358
>gi|163745388|ref|ZP_02152748.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45]
gi|161382206|gb|EDQ06615.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45]
Length = 317
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 3/173 (1%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM 71
+I A+ ++ +S D + AE D + G +
Sbjct: 146 AISILASTAATSAYVQIVQARSGDAPEGESTPITPEATAEVPLATATGDLAATLKAEGHV 205
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + L L+ +A +L P +A+ HTD++G+L+ N ++S+
Sbjct: 206 VLNRLE---FETGTSALGAGPFATLERLAELLKADPGLRVALVGHTDAVGSLEANTVLSR 262
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+RA+ ++ L+Q + RG Y P +N T+ GR+ N+R+E+ +
Sbjct: 263 KRAEAVRERLVQSYDVDPDRLEARGAGYLAPRGSNLTEAGREENRRVEVVVLS 315
>gi|134292200|ref|YP_001115936.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
gi|134135357|gb|ABO56471.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
Length = 224
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L L + + T + + +TDS G+ NL +S+ RADV+
Sbjct: 119 DALFATGQATLTPAARASLDKLLSEREDHTYTEVTVTGYTDSAGSDAANLALSKRRADVV 178
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++V G P+ +N T GR N+R+EI +
Sbjct: 179 AR-YLHAHGLKAHTMAVAGRGSADPVGSNATAEGRAANRRVEISL 222
>gi|228903029|ref|ZP_04067168.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222]
gi|228967605|ref|ZP_04128628.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228792096|gb|EEM39675.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228856622|gb|EEN01143.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222]
Length = 234
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 67/175 (38%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L + + KK ++ + + K + + + +
Sbjct: 55 LSASSLEAEQAKKQEEARAKE-KKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 113
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I ++ F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 114 TILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWEL 173
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 174 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 228
>gi|163738350|ref|ZP_02145765.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
gi|161388271|gb|EDQ12625.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
Length = 169
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 54/172 (31%), Gaps = 20/172 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ + +S C + LD + + Q +
Sbjct: 7 AMLVAAALGLSACA---GNPWDDTAGGNGSGAGAGAGAAGQLDPSSPAYFQQTVGDRV-- 61
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ V + L +LQ A L P V+ I+ H D GT +
Sbjct: 62 --------------LFAVDQSTLSPAAQSVLQGQARWLTANPDYVVTIEGHADEQGTREY 107
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + RA+ + YL+ + + + V F + P++ + N+R
Sbjct: 108 NLALGARRANAAREYLLSQ-GVAGNRLQVVSFGKERPLEICSNEACYTKNRR 158
>gi|163742233|ref|ZP_02149621.1| peptidoglycan-associated lipoprotein [Phaeobacter gallaeciensis
2.10]
gi|161384563|gb|EDQ08944.1| peptidoglycan-associated lipoprotein [Phaeobacter gallaeciensis
2.10]
Length = 169
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 53/172 (30%), Gaps = 20/172 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ + +S C LD + + Q +
Sbjct: 7 AMLVAAALGLSACA---GNPWDDTAGGGGSGAGAGAGAAGQLDPSSPAYFQQTVGDRV-- 61
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ V + L +LQ A L P V+ I+ H D GT +
Sbjct: 62 --------------LFAVDQSTLSPAAQSVLQGQARWLTANPDYVVTIEGHADEQGTREY 107
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + RA+ + YL+ + + + V F + P++ + N+R
Sbjct: 108 NLALGARRANAAREYLLSQ-GVAGNRLQVVSFGKERPLEICSNEACYTKNRR 158
>gi|156976618|ref|YP_001447524.1| hypothetical protein VIBHAR_05392 [Vibrio harveyi ATCC BAA-1116]
gi|156528212|gb|ABU73297.1| hypothetical protein VIBHAR_05392 [Vibrio harveyi ATCC BAA-1116]
Length = 207
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 70/207 (33%), Gaps = 28/207 (13%)
Query: 2 IKELGLSMFIMTTISGCGL--ASREKKKVFLHKSNDTDIV------------------NK 41
+K L ++GC + L + T+
Sbjct: 1 MKHWFLV--ACGFLAGCTSINSDMVPGGNMLDTAPRTNSELRHPEWGYAKSYSSAPRYVA 58
Query: 42 RFGSSLDKAED---EFQMQLQDTGIVVS-RIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
+ SS++K +M L I G+ + + V F L + +
Sbjct: 59 QVPSSMEKKSQGVMSLEMFLNRHQIAHETISGEHLMIRLKEQVHFQTGSARLLAQSQDWI 118
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
Q + L + I H DS G N +S++RA ++ L+ + R S RG
Sbjct: 119 QSLGHYLAGRTDVDVVIDGHADSTGAASFNDSLSEKRAREVEKQLLATSLPRQRVFS-RG 177
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIF 183
F P +N T G+ N+R+E+ +
Sbjct: 178 FGEYVPQCSNATASGKACNRRVELMLI 204
>gi|170735277|ref|YP_001774391.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169821315|gb|ACA95896.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 228
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ L + L + + I +TD +GT N +S++RA +
Sbjct: 122 DANFDFNQAILTPAAMQQLDKVIANGKGMTFGTVGISGYTDGLGTDTYNRRLSEQRAQAV 181
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S +Q + R + G+ + P+ N+T +GR N+R+EI +
Sbjct: 182 AS-YLQAHGLNARRFEIHGYGAERPVALNNTALGRAQNRRVEIVL 225
>gi|120437200|ref|YP_862886.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
gi|117579350|emb|CAL67819.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
Length = 522
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 63/163 (38%), Gaps = 7/163 (4%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT-CYIPVHVSFVSEVFL 88
+ N+R +L + E ++ + G I + +
Sbjct: 342 ESEEMGYFASNRRGTDNLYQFTREENEIIEAPTVTDETSGQDIIPIDGSKIYFDFDKATI 401
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ + P+L + T +N +P+ + ++SH D+ G+ N+ +S+ RA YL+++G+
Sbjct: 402 KAESKPVLDSVVTYMNDYPNIKVKVESHADARGSDSYNMALSKRRAASTVDYLVEKGIDK 461
Query: 149 NRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPRG 186
R ++ G+ P + T N+R + R
Sbjct: 462 AR-LTSEGYGESRPTNDCTQPTGCTNEQYAKNRRSAFVVSNRN 503
>gi|320354880|ref|YP_004196219.1| peptidoglycan-associated lipoprotein [Desulfobulbus propionicus DSM
2032]
gi|320123382|gb|ADW18928.1| peptidoglycan-associated lipoprotein [Desulfobulbus propionicus DSM
2032]
Length = 170
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 62/184 (33%), Gaps = 21/184 (11%)
Query: 1 MIKELGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+ + L+ + ++GC KK S T L + +
Sbjct: 6 MLNFVMLAFLALGVSLTGCS------KKAADTTSQVTGTEGAGASEPL---------ETE 50
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
D+GI+ R + + + + ++ A + K P I I+ + D
Sbjct: 51 DSGIMEGRTSGP----MVPVYFEFDSSSITGEQVQRIETNADFIKKNPDLKIRIEGNCDP 106
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N+ + + RA + ++ ++ F + + ++ N+R +
Sbjct: 107 RGTQEYNIALGERRAQSA-KTYLINLGVNSNQLTTVSFGEEKLLLFGHDEISWAQNRRDD 165
Query: 180 IQIF 183
I
Sbjct: 166 FVIV 169
>gi|149375537|ref|ZP_01893307.1| flagellar motor protein MotB [Marinobacter algicola DG893]
gi|149360242|gb|EDM48696.1| flagellar motor protein MotB [Marinobacter algicola DG893]
Length = 305
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 6/157 (3%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLE 89
+ +L++ + ++D + +++ I + +F L
Sbjct: 108 TDVAVESAIQDELQKTLEQVRSVLETAIEDGRVNLTQDHHRIIVRVEEKGAFPSGSADLT 167
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRG 145
+F +L +A IL + P + I+ HTD + N +S RA + + L+ G
Sbjct: 168 WEFEGLLLEMADILVEIPG-KLTIEGHTDDVPIRTQRFYSNWDLSAARAAAVANALLAEG 226
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++V G AY P N + R N+R+EI I
Sbjct: 227 KLKPSRLAVTGLAYTEPRVPNTSSENRAKNRRVEIII 263
>gi|238797976|ref|ZP_04641466.1| OmpA domain protein [Yersinia mollaretii ATCC 43969]
gi|238718181|gb|EEQ10007.1| OmpA domain protein [Yersinia mollaretii ATCC 43969]
Length = 246
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL--PMLQLIATILNKFPSTVIAIQSHT 117
+ I + R + + + + + L+ ML + ++ + I H+
Sbjct: 112 NRQIKIYRDIPVFSSTQMAPLFDSNSIKLKPNTQTSEMLNSLLLLVENNQGRKVLIVGHS 171
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G N+ +S+ RA V++ +LIQ+ S +RG P+ +NDTK+G+ N+R
Sbjct: 172 DNTGNASLNMALSERRAQVVRDWLIQQSSLSIDDFIIRGMGALEPVASNDTKIGQSQNRR 231
Query: 178 IEIQIFPRGN 187
+E+ + P+ N
Sbjct: 232 VEVLLLPKQN 241
>gi|297192373|ref|ZP_06909771.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
gi|197723026|gb|EDY66934.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 203
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 63/198 (31%), Gaps = 19/198 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ------ 55
++ ++G A LD + + +
Sbjct: 1 MRPATRITATAVVLAGALSAGLLAGGNAYADDGPYAAPPAEAPVRLDADDSDLKLPEGAT 60
Query: 56 -------------MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+ D+ + L + + IA
Sbjct: 61 LADPKVVDIKSVVEDISGEERREETNSDIKFALQAEVLFGKDSAELSGEATSRISAIAVE 120
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ + I + TD +GT + +S+ERAD + S L Q+ + +RG+ YP
Sbjct: 121 IKNQNAKKIRVFGFTDDLGTEAHGDKLSKERADAVHSVLAQQLSAEGITYEIRGYGEDYP 180
Query: 163 IDTNDTKVGRQNNQRIEI 180
I +N ++ GR+ N+R+E+
Sbjct: 181 IASNTSEEGRRKNRRVEV 198
>gi|54309710|ref|YP_130730.1| putative peptidoglycan-associated lipoprotein [Photobacterium
profundum SS9]
gi|46914148|emb|CAG20928.1| putative peptidoglycan-associated lipoprotein [Photobacterium
profundum SS9]
Length = 174
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 19/184 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKK---VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
++K L +++ +MT ++ C S T + G S +E E + Q
Sbjct: 6 ILKGLAIALPMMT-LAACSSTDSTDSSAASETTDGSTQTVVTTPVDGGSAALSEQELRSQ 64
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
V ++ + ML+ A L+ + ++ H
Sbjct: 65 ELRQEQTV--------------YFKFDTAEIQADYQAMLEAHAEFLSNSSDVKVIVEGHA 110
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + N+ + + RA+ + YL S IS+ + + P+ T N+R
Sbjct: 111 DERGTPEYNIALGERRANAVVQYLQAL-GVSASQISIVSYGEEKPLVLGHTDADYAKNRR 169
Query: 178 IEIQ 181
+
Sbjct: 170 AVLV 173
>gi|311108875|ref|YP_003981728.1| OmpA family protein 4 [Achromobacter xylosoxidans A8]
gi|310763564|gb|ADP19013.1| OmpA family protein 4 [Achromobacter xylosoxidans A8]
Length = 264
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 4/153 (2%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFVSEVFL 88
+ ++ S+ + + + + S+ + V L
Sbjct: 110 GEVQNEASRQQIASAFATSLNPTYKIVNGLRVSASKDEQGLLDQVLTNRVVEFETGSATL 169
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ +L +A ++ K S + I HTDS G+ NL +SQ RAD +K+YL+ +G+
Sbjct: 170 TTRGRELLDKVADVVPKLHSDKVQIIGHTDSSGSRSTNLALSQARADAVKTYLVDKGLPP 229
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
R G P+ TN T GR N+RIE +
Sbjct: 230 AR-FETLGAGPDQPLATNATAEGRAKNRRIEFR 261
>gi|89897844|ref|YP_514954.1| outer membrane protein [Chlamydophila felis Fe/C-56]
gi|89331216|dbj|BAE80809.1| outer membrane protein [Chlamydophila felis Fe/C-56]
Length = 191
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 77/201 (38%), Gaps = 32/201 (15%)
Query: 1 MIKE----LGLSMFIMTTISGCG--------------LASREKKKVFLHKSNDTDIVNKR 42
M K+ LG + + + C R+K+ + +N+
Sbjct: 1 MKKKYLSVLGCFLLALFALPSCSYPCGDWDITCQDCQRPKRKKQNFAFVPLYTDEEMNQN 60
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE-KKFLPMLQLIAT 101
F S D E++ + ++ ++ L +L +
Sbjct: 61 FADSYDSKEEQLYQTSSQS------------VSFRNITFATDSYTIKGEENLAILSSLVR 108
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ K P T + I+ HTD G NL + RA+ +K +LI++G+S R ++ + +
Sbjct: 109 QMQKSPKTTLYIEGHTDERGAAAYNLALGARRANAVKQHLIKQGISPERLFTIS-YGKEQ 167
Query: 162 PIDTNDTKVGRQNNQRIEIQI 182
PI++ ++ Q N+R E ++
Sbjct: 168 PINSGHNELAWQQNRRTEFKV 188
>gi|251793057|ref|YP_003007783.1| peptidoglycan-associated lipoprotein [Aggregatibacter aphrophilus
NJ8700]
gi|247534450|gb|ACS97696.1| peptidoglycan-associated lipoprotein [Aggregatibacter aphrophilus
NJ8700]
Length = 154
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/179 (13%), Positives = 62/179 (34%), Gaps = 33/179 (18%)
Query: 2 IKELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ +L ++ + ++ CG +++ + + +
Sbjct: 1 MNKLTKALLVAGSVAVLAACGSSNKTENGNGSNGQTFGGYSVQDLQQ------------- 47
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + ++ +++ +L A LN P+T + ++ HTD
Sbjct: 48 ----------------RYNTVLFGFDKYDIQGEYVQILDAHAAYLNATPATSVRVEGHTD 91
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + + RA +++YL + IS + + P + + N+R
Sbjct: 92 ERGTPEYNMALGERRAHAVQNYLTSK-GVQAGQISTVSYGEEKPAELGHDEAAYSKNRR 149
>gi|327252310|gb|EGE63982.1| ompA family protein [Escherichia coli STEC_7v]
Length = 127
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 49/118 (41%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + ++ L + +Q +A L T + HTD+ G
Sbjct: 8 ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSY 67
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA+V+ G R ++ +G KYPI +N T GR N+R+ + I
Sbjct: 68 NEALSLKRANVVADAWAMGGQIPRRNLTTQGLGKKYPIASNKTAQGRAENRRVAVVIT 125
>gi|297202083|ref|ZP_06919480.1| type VI secretion system OmpA/MotB [Streptomyces sviceus ATCC
29083]
gi|197714277|gb|EDY58311.1| type VI secretion system OmpA/MotB [Streptomyces sviceus ATCC
29083]
Length = 210
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 81/202 (40%), Gaps = 19/202 (9%)
Query: 4 ELGLSMFIMTTISGCGLAS---REKKKVFLHKSNDTDIVNKRF-----------GSSLDK 49
L L++ + + ++ L + + + + G++L +
Sbjct: 9 RLALAITVASLMAALTLTPAHADDGDPSYPPGTEPSATAPVEVDPNDPDLKLPEGATLAE 68
Query: 50 AEDEFQMQLQDTGIVVSRIGDM---ITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNK 105
+ Q+ + R D + + V F L + IA +
Sbjct: 69 PKVLDIKQVVEDQTGDERREDTNADVKFALQAEVLFGKDSAKLNGDARARISAIAAEIKN 128
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+T I + TD++G+ + +S++RA+ ++ L Q S VRG++ +PI +
Sbjct: 129 QNATRIRVFGFTDNLGSYAHGRTLSRQRANAVQDVLDQELKDSGITYEVRGYSEDFPIAS 188
Query: 166 NDTKVGRQNNQRIEIQIFPRGN 187
N T+ GR+ N+R+E+ FPRG
Sbjct: 189 NATEAGRKKNRRVEVS-FPRGE 209
>gi|118479664|ref|YP_896815.1| flagellar motor protein MotB [Bacillus thuringiensis str. Al Hakam]
gi|196044798|ref|ZP_03112032.1| chemotaxis protein MotB [Bacillus cereus 03BB108]
gi|118418889|gb|ABK87308.1| chemotaxis protein, MotB [Bacillus thuringiensis str. Al Hakam]
gi|196024286|gb|EDX62959.1| chemotaxis protein MotB [Bacillus cereus 03BB108]
Length = 262
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S E+ K + K + + + +
Sbjct: 83 LSA-SSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 141
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 142 TILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWEL 201
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 202 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 256
>gi|293408320|ref|ZP_06652159.1| hypothetical protein ECEG_03255 [Escherichia coli B354]
gi|291471498|gb|EFF13981.1| hypothetical protein ECEG_03255 [Escherichia coli B354]
Length = 433
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 10/186 (5%)
Query: 6 GLSMFIMTTISGCGLAS---REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
G+++ +M T+ G + + ++ + + ++
Sbjct: 249 GIALLVMLTLFGLYSHRMNLATETVQQRIDAIGKNLPPPPVPVHKLRLKILLANEIARGL 308
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V F + + P++ A + + + + HTDS
Sbjct: 309 LTVEEDDHHSRVIFRGDTMFIPGQKTVNDALRPVIDKAAREIARVGGA-VTVTGHTDSQP 367
Query: 122 TLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+N ++S++RA + S L+ G I V G P+ N TK GR N+R
Sbjct: 368 IHSAEFPSNQVLSEKRAAEVAS-LLTSGGIPASRIRVVGKGDTVPVADNRTKTGRAQNRR 426
Query: 178 IEIQIF 183
+EI +
Sbjct: 427 VEILVV 432
>gi|167623057|ref|YP_001673351.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167353079|gb|ABZ75692.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 365
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 47/125 (37%), Gaps = 5/125 (4%)
Query: 64 VVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
V G I + + + +EK ++ +AT + + P+ + I
Sbjct: 232 KVDAYGCPIFLEVESQLDIEAKFANNSAEVEKSSYGAIRELATYMKQHPNAEVTISGFAS 291
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ G N+ +S+ RA + LI + +S +G+ P+ + N+RI
Sbjct: 292 NTGKADYNMDLSERRAASVAEILINEYDIAPGRVSSKGYGITRPLMEGSSAEANAVNRRI 351
Query: 179 EIQIF 183
E +
Sbjct: 352 EAHVT 356
>gi|189402632|ref|ZP_02783681.2| OmpA family protein [Escherichia coli O157:H7 str. EC4401]
gi|189406165|ref|ZP_02826729.2| OmpA family protein [Escherichia coli O157:H7 str. EC508]
gi|189354554|gb|EDU72973.1| OmpA family protein [Escherichia coli O157:H7 str. EC4401]
gi|189376183|gb|EDU94599.1| OmpA family protein [Escherichia coli O157:H7 str. EC508]
Length = 127
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 49/119 (41%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + ++ L + +Q +A L T + HTD+ G
Sbjct: 8 ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSY 67
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +S +RA+V+ G ++ +G KYPI +N T GR N+R+ + I P
Sbjct: 68 NEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITP 126
>gi|254373800|ref|ZP_04989283.1| hypothetical protein FTDG_01584 [Francisella novicida GA99-3548]
gi|151571521|gb|EDN37175.1| hypothetical protein FTDG_01584 [Francisella novicida GA99-3548]
Length = 417
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 24/196 (12%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K +L L ++TT+S C + K +L+ E
Sbjct: 1 MKKLLKLCLMASLLTTLSACQTLDDKDKD-----------SGPLTFPTLEPCTAELLQSN 49
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-- 116
Q V + G + L + +L + L +T I+ +
Sbjct: 50 QSFICVKEQTGPDLIET--NIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAG 107
Query: 117 -------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
TD N+ +S+ RA ++ YL+ +G+ S+ I+++ Y+ PI ND+
Sbjct: 108 KVESKILTDQKILTDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDST 167
Query: 170 VGRQNNQRIEIQIFPR 185
R NQR+EI + R
Sbjct: 168 SSRAINQRVEITLKSR 183
>gi|218709831|ref|YP_002417452.1| putative outer membrane protein [Vibrio splendidus LGP32]
gi|218322850|emb|CAV19027.1| putative outer membrane protein [Vibrio splendidus LGP32]
Length = 211
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 67/191 (35%), Gaps = 14/191 (7%)
Query: 1 MIKELGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K L + ++T + C +++ ++ + + + D + +
Sbjct: 9 MMKITYLLLPVLTMTLFACS----NQQREAYIETPEAEQIADLQDDDKDGVVNA-RDTCP 63
Query: 60 DTGIV--VSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
T V G T + + F + +A L + S I
Sbjct: 64 GTPETSQVDNDGCGETIRAEEVRQLKILFAHDSFEVNPIFSSQISTMAEFLENYKSASIE 123
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
IQ + +G+ + NL +S++RA+ ++ L+ + + G+ + + D
Sbjct: 124 IQGYASKVGSNEYNLDLSKKRANNVQDELLSN-GIEPERVRIVGYGEERLENDGDDPTSH 182
Query: 173 QNNQRIEIQIF 183
N+++ +
Sbjct: 183 ALNRKVTATVV 193
>gi|254481114|ref|ZP_05094360.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
gi|214038909|gb|EEB79570.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
Length = 209
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 8/149 (5%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
K G L + ++ Q L V I+ + + ++ + L+ +
Sbjct: 60 KDSGLVLQENIEDLQQALATLNAKVLDQEIQISLSA-DLLFDFDQYQVKPEADAELRTLT 118
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF-ISVRGFAY 159
T+L + S + I HTD++G+ N +S++RA+ IK +L+ G + I G
Sbjct: 119 TVLLETGSAQVRIVGHTDALGSETYNQRLSEQRAESIKRWLLGPGHIGSDVTIETMGKGE 178
Query: 160 KYPIDTN------DTKVGRQNNQRIEIQI 182
P+ N D GR N+R+E+ I
Sbjct: 179 SEPVAPNSNIDGSDNVDGRALNRRVELVI 207
>gi|91976354|ref|YP_569013.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91682810|gb|ABE39112.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 434
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ + +E+ LP+L+ +A ++ P+ I + HTD+ G
Sbjct: 315 VEACQSKLSTLVAAQKINFERGSAEIEQASLPVLKQLAAVIAHCPAAQIEVAGHTDANGK 374
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA+ + + + + + G+ P+ NDT R N+RIE +
Sbjct: 375 KAANEALSKRRAEAVAD-SLTKAGIGSAKLIAVGYGSAKPLGPNDTAEARAKNRRIEFAV 433
>gi|330814655|ref|YP_004362830.1| type VI secretion system OmpA/MotB family protein [Burkholderia
gladioli BSR3]
gi|327374647|gb|AEA65998.1| type VI secretion system OmpA/MotB family protein [Burkholderia
gladioli BSR3]
Length = 420
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 7/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPS 108
+ + ++ + V F V ++ P++ IA + K P
Sbjct: 283 LKQLLKDEIAAGTVSVDEDARHSAVTFRGDAMFPPGGVTIKSAMAPLVAKIAGEIVKVPG 342
Query: 109 TVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+++ +TD++ S+ERA + L GV +NR + G PI
Sbjct: 343 -KVSVLGYTDNLPIRSRQFPSNEALSEERATQVLQMLQAAGVPANR-LEAVGKGDADPIG 400
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T GR N+R+EI +
Sbjct: 401 DNRTAQGRAQNRRVEIVV 418
>gi|298529977|ref|ZP_07017379.1| peptidoglycan-associated lipoprotein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509351|gb|EFI33255.1| peptidoglycan-associated lipoprotein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 200
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 43/121 (35%), Gaps = 1/121 (0%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
M L+ LQ I+ + +F + I+ HTD GT
Sbjct: 80 AEARIQDAMEEITANRIHFAFDSYELDADARSALQKISEHMKRFDELRLVIEGHTDERGT 139
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ NL + + RA +L+ S+ + + + + P+ + N+R E ++
Sbjct: 140 AEYNLALGERRARAAYEFLVLL-GVSSDRLQIISYGEENPLVDESNESAWAQNRRAEFKV 198
Query: 183 F 183
Sbjct: 199 L 199
>gi|183221257|ref|YP_001839253.1| OmpA domain-containing protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911348|ref|YP_001962903.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167776024|gb|ABZ94325.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167779679|gb|ABZ97977.1| Putative outer membrane protein, OmpA domain; putative membrane
protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 271
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 8/170 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM-----ITCY 75
+ + K + + G L+ D +++ GI +++ +T
Sbjct: 102 KKKPQNKGKIIGLGAGCLAGLGTGFYLNTMYDNMAEEMKKQGITLTKSERGGETVALTAT 161
Query: 76 IPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++F + L+ K + +A L +P T I I H + G NL +SQ+RA
Sbjct: 162 MDGGIAFEDGKADLKGKGKENVDKLAEALAAYPETKINITGHANRTGAEDLNLRLSQDRA 221
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
K +I+ GV R +V+G P+ D K G +N+R+E++I P
Sbjct: 222 VTAKDAIIENGVEGKRIGTVQGLGSSTPMKNVDPKDG--SNRRVEVEIVP 269
>gi|167576586|ref|ZP_02369460.1| unnamed protein product; Similar to putative exported protein
[Burkholderia thailandensis TXDOH]
Length = 541
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 65 VSRIGDMITCYIPVHVSF-VSEVFLEKKF-LPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
VS G+ + F + LQ ++ P + I H+DS G+
Sbjct: 408 VSPRGESTAMQLDTVTLFATGQATFSPGAVQRELQHALRMILANPEQRVLIVGHSDSAGS 467
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NL +S+ RA I+ + + +GV RFI V+G +P+ N + +GR N+R+EI +
Sbjct: 468 DAVNLQLSKARARAIRDWFVDQGVLKTRFI-VQGAGDTHPVADNASPLGRALNRRVEILL 526
Query: 183 FP 184
P
Sbjct: 527 IP 528
>gi|46203195|ref|ZP_00208848.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 170
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 50/174 (28%), Gaps = 25/174 (14%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L L++ + C S +
Sbjct: 11 SLTLALCAALGLGACSKDSDLADASGFGAGGAGGVARPGSAQDF---------------- 54
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V +GD + L L A+ L ++ I+ H D GT
Sbjct: 55 -VVNVGDRV-------FFESDSSDLTPTATATLDKQASWLQRYSRYSFLIEGHADERGTR 106
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N + RA + YL RG++ +R +V + + P+ + N+R
Sbjct: 107 EYNYSLGARRAQAVLDYLTSRGIAPSRMRTVS-YGKERPVAVCNDISCWSQNRR 159
>gi|269793616|ref|YP_003313071.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Sanguibacter keddieii DSM 10542]
gi|269095801|gb|ACZ20237.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Sanguibacter keddieii DSM 10542]
Length = 430
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + L + L +A L + + V+ I HTDSI N +S++RA
Sbjct: 318 DAALFDFGKHTLRPESQQTLDSLAAALAETGAPVLQIGGHTDSISDDAFNQTLSEDRAQA 377
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQI 182
+ L++RGV++ + G+ P+ D GRQ N+R+EI +
Sbjct: 378 VADGLVERGVTAT--LETTGYGETQPVAPETTADGADNPAGRQLNRRVEIFV 427
>gi|217979014|ref|YP_002363161.1| type VI secretion system OmpA/MotB family protein [Methylocella
silvestris BL2]
gi|217504390|gb|ACK51799.1| type VI secretion system OmpA/MotB family protein [Methylocella
silvestris BL2]
Length = 493
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 6/147 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATIL 103
S LD + +Q + V + I I F + + P++ IA L
Sbjct: 349 SQLDHVRNVLAPNIQSGALSVDATANQIVIRIIDRALFQPGKSTMLDDVKPLMMYIAMAL 408
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNL---LISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ + + H+D+ + L+++ +S + G
Sbjct: 409 DDDRGA-VKVIGHSDNTPISNARFASNFELSLERANVVGALLKQSLSHPERVETEGKGAD 467
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRGN 187
PI NDT GR N+R+EI + PR +
Sbjct: 468 APIAPNDTPEGRAKNRRVEIVV-PRSD 493
>gi|83642951|ref|YP_431386.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
gi|83630994|gb|ABC26961.1| Flagellar motor protein [Hahella chejuensis KCTC 2396]
Length = 275
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE----FQMQLQDTGIVVSRIGDMITC 74
+ V ++V++ D+ + +++D + + +
Sbjct: 96 AEQPAPQSNVEPSLDLSQEVVSEAAYMENDRLASRMISLLENEIEDQAVDIKFDDKGVVL 155
Query: 75 YIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLI 129
+F S L+ LP+L + +L I + HTD ++N +
Sbjct: 156 SFTERATFASGSEELKLYMLPVLMKVTDVLADCKG-DILVTGHTDDRPIDSVKFRSNWDL 214
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S RA + L+ G +S G A P+ NDT R N+R+EI I
Sbjct: 215 SAARAVSVVHRLVLDGRLDASRVSAIGQAETRPLVPNDTDEHRAQNRRVEIHI 267
>gi|254516702|ref|ZP_05128761.1| OmpA/MotB [gamma proteobacterium NOR5-3]
gi|219675125|gb|EED31492.1| OmpA/MotB [gamma proteobacterium NOR5-3]
Length = 177
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/186 (11%), Positives = 58/186 (31%), Gaps = 15/186 (8%)
Query: 2 IKELGLS------MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+K++ ++ +F + C S ++ + + + +
Sbjct: 1 MKQIPVAGKALTLLFAAIFLVACSGTSTKEDEAAAAAAAAEAAAADAAREAE-------R 53
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
++ V L + +L + +
Sbjct: 54 QAQSAAAEAQRQMEQAAMAAGTVFYFEFDSSTLTPAAQAAVDAHIALLKTN-DRSVRLDG 112
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD GT N+ + + RA+ ++ Y++ ++ I + + P+ + N
Sbjct: 113 HTDERGTRDYNMALGERRANAVRDYMVVN-GVASYRIETVSYGEEQPVAYGSGESSWSQN 171
Query: 176 QRIEIQ 181
+R+E++
Sbjct: 172 RRVELK 177
>gi|254441790|ref|ZP_05055283.1| peptidoglycan-associated lipoprotein, putative [Octadecabacter
antarcticus 307]
gi|198251868|gb|EDY76183.1| peptidoglycan-associated lipoprotein, putative [Octadecabacter
antarcticus 307]
Length = 172
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 19/188 (10%)
Query: 1 MIKELGLSMFI-MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + ++F+ + +S C A R + +I G + D + +F Q
Sbjct: 1 MKHFITAALFVGVLALSACTNADRFNNFNGDGQDGANNIDQSTLGGNDDPSSPQFFSQTI 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + V L + L + L+ + I+ H D
Sbjct: 61 GDRV----------------MFAVDTSTLTAEGRNTLDGQSGWLSTNSDYLAVIEGHADE 104
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + RA+ ++ YLI + ++ I + + PI + N+R
Sbjct: 105 QGTREYNLALGARRANAVREYLISK-GLASSRIRTVSYGKERPIAVCSEESCYAQNRRA- 162
Query: 180 IQIFPRGN 187
+ I G
Sbjct: 163 LTIISMGQ 170
>gi|325066515|ref|ZP_08125188.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Actinomyces oris K20]
Length = 359
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 58/172 (33%), Gaps = 8/172 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G G S + + + + + +
Sbjct: 187 GSGSYSDGTISITNLGDGSAIVNGSTISAKPVPKAGKVGTFPSIDAAKPVQSCGTVITLE 246
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + L +AT+L + + +Q HTDS+ N +S++RA
Sbjct: 247 DSVLFDFGSSDLRGEASTTLTNLATVLKDSKAPKVQVQGHTDSVSDDAFNQKLSEQRAQA 306
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQI 182
+ S L G +++ + G+ P+ N D GR+ N+R+E+ +
Sbjct: 307 VSSALKSNGATAD--LEAVGYGETKPVAPNENPDGSDNPGGRRLNRRVEVFV 356
>gi|114563969|ref|YP_751483.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114335262|gb|ABI72644.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 215
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 51/130 (39%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ VS D + + + P L + + + P I
Sbjct: 83 ALIAEQCRQQRDVSVAVDCFGSILQPVYFDFDKSVVLLTQRPTLVRVQQYIEQHPQVAIR 142
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
++ HTD+IG+ N +S +RA IK L+ I + G + K P+ N T GR
Sbjct: 143 LEGHTDNIGSDAVNRSLSLKRAATIKDLLVNEYQFQPTSIEIVGMSNKNPVADNATIEGR 202
Query: 173 QNNQRIEIQI 182
Q N+R+E I
Sbjct: 203 QRNRRVEFII 212
>gi|315223432|ref|ZP_07865289.1| OmpA family protein [Capnocytophaga ochracea F0287]
gi|314946605|gb|EFS98596.1| OmpA family protein [Capnocytophaga ochracea F0287]
Length = 290
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 5/133 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L D + + ++ I + F + K +L+ +A ++ P ++ H
Sbjct: 136 LDDQDVDIRVEKGVVFINISDKMLFSSGSYTISKNAKSVLEKVAKVVKNKPDFEFMVEGH 195
Query: 117 TDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD+ +++N +S RA I L + + ++ G +Y P+ +N GR
Sbjct: 196 TDNVNIKTSCIRDNWDLSVMRATEIVRVLQKDFGVAPERMTAAGRSYYVPLASNGDANGR 255
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 256 ALNRRTRIVVLPK 268
>gi|296159938|ref|ZP_06842759.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295889921|gb|EFG69718.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 318
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 13/146 (8%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV------------SFVSEVFLEKKFLPM 95
+ + + + I + + L + +
Sbjct: 171 ESQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGRAI 230
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +A + K + +AI HTD+ G +N+ +SQ RAD +K YL+ + + ++
Sbjct: 231 LDQMAAAMMKMTNKTVAIIGHTDNSGNRTSNIALSQARADAVKGYLVAK-GIPPQQMTTT 289
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G PI +NDT GR N+RIE +
Sbjct: 290 GVGPDQPIASNDTTDGRARNRRIEFR 315
>gi|62185545|ref|YP_220330.1| putative peptidoglycan-associated protein (periplasmic)
[Chlamydophila abortus S26/3]
gi|62148612|emb|CAH64384.1| putative peptidoglycan-associated protein (periplasmic)
[Chlamydophila abortus S26/3]
Length = 191
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 75/193 (38%), Gaps = 16/193 (8%)
Query: 1 MIKE----LGLSMFIMTTISGCG------LASREKKKVFLHKSNDTDIVNKRFGSSLDKA 50
M K+ L + + + C E + + + V +++
Sbjct: 1 MKKKYLSVLSCLLLALFALPSCSYPCGDWDTVCEDCQHPRRRKQNFAFVPLYTDEEMNQH 60
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE-KKFLPMLQLIATILNKFPST 109
+ ++ S + ++ ++ L +L + + K P
Sbjct: 61 FADIYDSKEEQLYKTSSQ----SVTFRNITFATDSYTIKGEENLAILSSLVRQMQKSPKA 116
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ I+ HTD G NL + RA+ +K +LI++G+S++R +V + + PI++ +
Sbjct: 117 TLYIEGHTDERGAAAYNLALGARRANAVKQHLIKQGISADRLFTVS-YGKEQPINSGHNE 175
Query: 170 VGRQNNQRIEIQI 182
+ Q N+R E +I
Sbjct: 176 LAWQQNRRTEFKI 188
>gi|66044664|ref|YP_234505.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|289674679|ref|ZP_06495569.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
syringae FF5]
gi|302187150|ref|ZP_07263823.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
syringae 642]
gi|63255371|gb|AAY36467.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|330896136|gb|EGH28357.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330936710|gb|EGH40898.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330959272|gb|EGH59532.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330968884|gb|EGH68950.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 167
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 50/123 (40%), Gaps = 2/123 (1%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ S + I L+ + + L + A L + ++ +TD
Sbjct: 46 NSGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRSLDVHAKDLKAN-GARVVLEGNTD 104
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N+ + + RA ++ YL+ + S + + + + P+ T + + N+R+
Sbjct: 105 ERGTREYNMALGERRAKAVQRYLVLQ-GVSPAQLELVSYGEERPVATGNDEQSWAQNRRV 163
Query: 179 EIQ 181
E++
Sbjct: 164 ELR 166
>gi|322435990|ref|YP_004218202.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
gi|321163717|gb|ADW69422.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
Length = 260
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 57/167 (34%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ + ++A ++ V++ + +
Sbjct: 78 ATKGIAGAQAAADQAGQHATAAGQSADQANQAAQGASNRVDSLNGVIANLDNYKQLSDVS 137
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L K L +A L ++ + TDS+G + N +SQ RAD +
Sbjct: 138 VTFGFDKTVLTKSDKEQLDGLAASLQSARGYLLEVTGGTDSVGDAQYNYKLSQRRADAVV 197
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
YL + + G I ++ T GR N+R+E+++
Sbjct: 198 DYLSAKYNVPPHKFYLVGIGKDAQIASDKTASGRAQNRRVEVKLMSN 244
>gi|229895607|ref|ZP_04510778.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis Pestoides A]
gi|229701413|gb|EEO89441.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis Pestoides A]
Length = 560
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 81 SFVSEVF---LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
F S L + M+ + +++ + I I H+D+ G+ N+ +S++RA +
Sbjct: 441 LFDSNSTKLKLNSQTNEMMMELLSLVERNKEKKILIVGHSDNTGSSSMNMALSEQRALAL 500
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +LI+R + +G P+ TN T+ GR+ N+R+E+ I P +
Sbjct: 501 RDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQD 550
>gi|254372326|ref|ZP_04987817.1| OmpA family protein [Francisella tularensis subsp. novicida
GA99-3549]
gi|151570055|gb|EDN35709.1| OmpA family protein [Francisella novicida GA99-3549]
Length = 417
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 24/196 (12%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K +L L ++TT+S C + K +L+ E
Sbjct: 1 MKKLLKLCLMASLLTTLSACQTLDDKDKD-----------SGPLTFPTLEPCTAELLQSN 49
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-- 116
Q V + G + L + +L + L +T I+ +
Sbjct: 50 QSFICVKEQTGPDLIET--NIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAG 107
Query: 117 -------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
TD N+ +S+ RA ++ YL+ +G+ S+ I+++ Y+ PI ND+
Sbjct: 108 KVESKILTDQKILTDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDST 167
Query: 170 VGRQNNQRIEIQIFPR 185
R NQR+EI + R
Sbjct: 168 SSRAINQRVEITLKSR 183
>gi|22125427|ref|NP_668850.1| hypothetical protein y1530 [Yersinia pestis KIM 10]
gi|45442357|ref|NP_993896.1| hypothetical protein YP_2580 [Yersinia pestis biovar Microtus str.
91001]
gi|108808138|ref|YP_652054.1| hypothetical protein YPA_2144 [Yersinia pestis Antiqua]
gi|108811590|ref|YP_647357.1| hypothetical protein YPN_1427 [Yersinia pestis Nepal516]
gi|145599338|ref|YP_001163414.1| hypothetical protein YPDSF_2062 [Yersinia pestis Pestoides F]
gi|149365180|ref|ZP_01887215.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|162421467|ref|YP_001607103.1| OmpA domain-containing protein [Yersinia pestis Angola]
gi|165926917|ref|ZP_02222749.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939224|ref|ZP_02227774.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166011145|ref|ZP_02232043.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212522|ref|ZP_02238557.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167398614|ref|ZP_02304138.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421232|ref|ZP_02312985.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424634|ref|ZP_02316387.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167467871|ref|ZP_02332575.1| OmpA domain protein [Yersinia pestis FV-1]
gi|218930004|ref|YP_002347879.1| hypothetical protein YPO2953 [Yersinia pestis CO92]
gi|229838541|ref|ZP_04458700.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229899106|ref|ZP_04514249.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis biovar Orientalis str. India 195]
gi|229901867|ref|ZP_04516988.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis Nepal516]
gi|270490053|ref|ZP_06207127.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294504711|ref|YP_003568773.1| hypothetical protein YPZ3_2601 [Yersinia pestis Z176003]
gi|21958316|gb|AAM85101.1|AE013756_2 hypothetical [Yersinia pestis KIM 10]
gi|45437221|gb|AAS62773.1| putative membrane protein [Yersinia pestis biovar Microtus str.
91001]
gi|108775238|gb|ABG17757.1| membrane protein [Yersinia pestis Nepal516]
gi|108780051|gb|ABG14109.1| putative membrane protein [Yersinia pestis Antiqua]
gi|115348615|emb|CAL21559.1| putative membrane protein [Yersinia pestis CO92]
gi|145211034|gb|ABP40441.1| membrane protein [Yersinia pestis Pestoides F]
gi|149291593|gb|EDM41667.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|162354282|gb|ABX88230.1| OmpA domain protein [Yersinia pestis Angola]
gi|165912824|gb|EDR31451.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165921268|gb|EDR38492.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989823|gb|EDR42124.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206453|gb|EDR50933.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960721|gb|EDR56742.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051118|gb|EDR62526.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167056516|gb|EDR66285.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229680763|gb|EEO76858.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis Nepal516]
gi|229687508|gb|EEO79581.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis biovar Orientalis str. India 195]
gi|229694907|gb|EEO84954.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|262362773|gb|ACY59494.1| hypothetical protein YPD4_2587 [Yersinia pestis D106004]
gi|262366698|gb|ACY63255.1| hypothetical protein YPD8_2582 [Yersinia pestis D182038]
gi|270338557|gb|EFA49334.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294355170|gb|ADE65511.1| hypothetical protein YPZ3_2601 [Yersinia pestis Z176003]
gi|320014496|gb|ADV98067.1| putative OMPA family outer membrane porinprecursor [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 560
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 81 SFVSEVF---LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
F S L + M+ + +++ + I I H+D+ G+ N+ +S++RA +
Sbjct: 441 LFDSNSTKLKLNSQTNEMMMELLSLVERNKEKKILIVGHSDNTGSSSMNMALSEQRALAL 500
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ +LI+R + +G P+ TN T+ GR+ N+R+E+ I P +
Sbjct: 501 RDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQD 550
>gi|326404482|ref|YP_004284564.1| hypothetical protein ACMV_23350 [Acidiphilium multivorum AIU301]
gi|325051344|dbj|BAJ81682.1| hypothetical protein ACMV_23350 [Acidiphilium multivorum AIU301]
Length = 456
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 7/144 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATIL 103
+ LD+ Q ++ + V + I F +E LP++ I L
Sbjct: 310 NVLDRLRGFLQPEITKGEVAVLGTVNAPVIRINNTGLFASGSATVESTALPLISKIGQAL 369
Query: 104 NKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ + + +TDS NNL++S++RA + L + +R I+ G
Sbjct: 370 AREKG-KVQVIGYTDSQPIHTLRFPNNLVLSEDRAKAAAAVLDRAIGDQSR-ITAEGRGA 427
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF 183
PI TN T GR N+RIEI +
Sbjct: 428 ADPIATNATPQGRALNRRIEIVLI 451
>gi|302341787|ref|YP_003806316.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
gi|301638400|gb|ADK83722.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
Length = 354
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 16/169 (9%)
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT----------GIVVSRIGDMITCYIPV 78
+ +SLD D+ + + G+ ++ + +P
Sbjct: 183 VSASTATPADAVATEENSLDSLLDQLRAAAGEGMPGAAGQPAEGLQITSAEGRLVIRLPE 242
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+++F + L+ L +A ++ + P + + HTD + S
Sbjct: 243 NITFDLGQALLKPVMAETLGRLAPVVLRNPQCQVIVTGHTDDLPI-STAQFASNWELSAA 301
Query: 138 KSYL----IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ + + +RG A + P+ ND+ RQ N+R+EI++
Sbjct: 302 RAAAVARALTAHGVPAGRLHIRGMADQSPLLPNDSPENRQQNRRVEIEL 350
>gi|296283270|ref|ZP_06861268.1| hypothetical protein CbatJ_06596 [Citromicrobium bathyomarinum
JL354]
Length = 168
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 60/178 (33%), Gaps = 19/178 (10%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ + +++ C + E+ + G + E + I
Sbjct: 8 AIVLSATVSLAACKSPAPEQLPP-EPGVSQPTTGGNTGGPGVGTQEHFVRAVNGQNVI-- 64
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
++ LQ A ++++P+ + I+ H D GT +
Sbjct: 65 --------------YFDTDRYNIDTADAAALQTQAQYMSQYPNITVTIEGHADERGTREY 110
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IEIQI 182
NL + + RA+ K+YL+ + I + + P+ T T N+R + + +
Sbjct: 111 NLALGERRANSAKNYLVSL-GIAANRIRTVSYGEERPVATASTPEAWAKNRRAVTVVV 167
>gi|281420329|ref|ZP_06251328.1| lipoprotein PG3 [Prevotella copri DSM 18205]
gi|281405631|gb|EFB36311.1| lipoprotein PG3 [Prevotella copri DSM 18205]
Length = 248
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 75/215 (34%), Gaps = 38/215 (17%)
Query: 2 IKELGLSMF---IMTTISGCGLASREKKKVFLHKSNDTDIVNKR---------------- 42
+K+ ++ + S CG + V +
Sbjct: 20 MKKTNFAVAGLSLCLLFSSCGTNQKTGTAVGAGSGAALGAIVGGLLNNSHRGTGALVGAA 79
Query: 43 ------------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFVSE-V 86
G +DK + E Q+++ + + + + F +
Sbjct: 80 IGAAVGGGAGNLIGKHMDKVKAE-AEQVKNAQVETVTDANGLSAVKVTFASGILFPTNGS 138
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
L L A +L ++IQ +TD+ G NL +SQ+RA+ + +YL GV
Sbjct: 139 TLSSSAKTDLAQFAGVLKNNTDCEVSIQGYTDATGNDGINLPLSQKRAEAVYNYLASCGV 198
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S + +V+GF P+ N T N+R+E+
Sbjct: 199 TSRQVKNVQGFGSANPVV-NTTAAC-AQNRRVEVY 231
>gi|197123809|ref|YP_002135760.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|196173658|gb|ACG74631.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
Length = 242
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 6/165 (3%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + + + + + ++ G+ + +
Sbjct: 82 CPAGQTCQGERCVAREPGSCASDRDCGAGEKCQAGRCAAAAPEASVPPECAD----VTAF 137
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L + LQ +A L + P+ + +Q + D GT + N+ + RA+
Sbjct: 138 SVHFAFDRSNLTPESQQNLQKLADCLKQAPAKRVLVQGNCDERGTAQYNVALGNRRAESA 197
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K YL GVS++ + + + P+ + T+ N+R + QI
Sbjct: 198 KKYLTDLGVSTS--VDTVSYGEEKPVCSEATEACWSKNRRDDFQI 240
>gi|163800343|ref|ZP_02194244.1| putative protein F-related protein [Vibrio sp. AND4]
gi|159175786|gb|EDP60580.1| putative protein F-related protein [Vibrio sp. AND4]
Length = 209
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 71/209 (33%), Gaps = 30/209 (14%)
Query: 2 IKELGLSMFIMTTISGCGL----------------ASREKKK------VFLHKSNDTDIV 39
+K L ++GC A R + +
Sbjct: 1 MKHWYLV--ACGLLAGCSSINPDMDMIPGGNMLDVAPRTNSELRHPEWGYTKSYAAAPRY 58
Query: 40 NKRFGSSLDKAED---EFQMQLQDTGIVVS-RIGDMITCYIPVHVSFV-SEVFLEKKFLP 94
+ +S++K D + L I G+ + + V F L +
Sbjct: 59 VTQAQNSMEKKSDGMMSLERFLNRHQIAHETINGEHLMVRLKEQVHFQTGSSRLSAQSQG 118
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+Q + L K + + H DS G N +S++RA ++ L++ + R S
Sbjct: 119 WIQSLGHYLAKRTDIDVVVNGHADSAGAASFNDSLSEKRAREVEKQLLETSLPRQRVFS- 177
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RGF P +N T G+ N+R+E+ +
Sbjct: 178 RGFGEYVPQCSNATASGKACNRRVELMLI 206
>gi|116748202|ref|YP_844889.1| OmpA/MotB domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116697266|gb|ABK16454.1| OmpA/MotB domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 189
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 19/179 (10%), Positives = 50/179 (27%), Gaps = 1/179 (0%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + ++ ++ C + ++ L
Sbjct: 10 RILLILVLIGGMAACQKKPASSGGAMGGEGAAMGGGFGSGDMGGMNQAKYRELGLNTPEE 69
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ L + +L + L ++ + ++ H D GT
Sbjct: 70 IREFENRRAAFENQDIYYDYDSYVLTEPAKRILDEKISFLKRYARVRVTVEGHCDERGTT 129
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ NL + + RA+ I+ S + ++ + + P + N+R +
Sbjct: 130 EYNLALGERRANSALQ-YIRNSGLSIQNLTSVSYGKERPAAMGHDEASWAKNRRAHFVL 187
>gi|209526860|ref|ZP_03275380.1| OmpA/MotB domain protein [Arthrospira maxima CS-328]
gi|209492731|gb|EDZ93066.1| OmpA/MotB domain protein [Arthrospira maxima CS-328]
Length = 285
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
SR G + +P + F L +L + L + V+ + HTD +
Sbjct: 165 SRSGSGLIMTLPSDILFNPGSSTLRPGANVILDNLIPDLQNYRGAVVRVAGHTDDSARRQ 224
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
NL++S +A+ + YL G+ P N + + RQ N+RIE+ I P
Sbjct: 225 QNLVLSSAQAEAVVQYLSNAVDYQAYHWVAIGYGMTRPALENTSDINRQLNRRIEVAITP 284
>gi|262378528|ref|ZP_06071685.1| OmpA/MotB [Acinetobacter radioresistens SH164]
gi|262299813|gb|EEY87725.1| OmpA/MotB [Acinetobacter radioresistens SH164]
Length = 485
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ V + P+L A +L + P+ V+ ++ HTD+ G+ N +S +R
Sbjct: 358 LNLEVIHFASGSAQVPDVNKPILDQAAALLQRVPNVVVTVKGHTDAEGSEAVNNNLSVQR 417
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
A + +YL+ R S + G+ P+ N T G+ N+RIE +I
Sbjct: 418 AQAVVNYLVSR-GVSPSKLQALGYGQDQPVTDNATSQGKFQNRRIEFEILNTDT 470
>gi|239813534|ref|YP_002942444.1| type IV / VI secretion system protein, DotU family [Variovorax
paradoxus S110]
gi|239800111|gb|ACS17178.1| type IV / VI secretion system protein, DotU family [Variovorax
paradoxus S110]
Length = 442
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 44/140 (31%), Gaps = 4/140 (2%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ + +++ + V+ D + F LP+L+ I L +
Sbjct: 292 RLARFLEPEIKQGLVTVTDEADRSVVRLRGDSFFGSGSAEPMAASLPVLRRIGQALAEVK 351
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKS--YLIQRGVSSNRFISVRGFAYKYPIDT 165
+ I H+D+ + + + + G A P+
Sbjct: 352 G-EVLITGHSDNQPIRSLRYPSNWHLSAARADAVKGALTTLVEPARMRSDGKADAEPVAA 410
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
NDT R N+R++I +
Sbjct: 411 NDTPANRARNRRVDIVLLSE 430
>gi|110639097|ref|YP_679306.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281778|gb|ABG59964.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 648
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + L + L+ + I H D++G+ N +SQ+RA
Sbjct: 543 KTVYFESNRADLNAEAKTELNQLGIYLDTHKEANVYISGHADALGSAAINNALSQKRAQA 602
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++ S I V F + P++TN T GR N+R++I +
Sbjct: 603 A-AVYLKAKGISAARIKVESFGSEKPVETNATVEGRAKNRRVQIVV 647
>gi|332161223|ref|YP_004297800.1| putative OmpA family protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318605118|emb|CBY26616.1| outer membrane protein ImpK/VasF, OmpA/MotB domain [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325665453|gb|ADZ42097.1| putative OmpA family protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860429|emb|CBX70737.1| hypothetical protein YEW_EP20110 [Yersinia enterocolitica W22703]
Length = 458
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 67/186 (36%), Gaps = 13/186 (6%)
Query: 8 SMFIMTTISGCGLASR------EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ I+ + S+ E + ++ ++ + + ++
Sbjct: 273 MLLCGFLIAATFIGSKYFLSVPESDLLKRMEALQRPVIVPTVAVQKLRLAILLKDEIAKQ 332
Query: 62 GIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V F + + + +++ +A +++ + I HTDS+
Sbjct: 333 LVSVDETSSHSKVIFKGDTMFQVGSDKVRPEIMSVIERVAQEVHRVQGA-VLIIGHTDSM 391
Query: 121 GTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
K N ++S++RA + ++ ++ I G P+ +ND GR N+
Sbjct: 392 PINKPGFPNNQVLSEKRAANVARFM-EKAGIPTDKIQFEGKGDTQPVSSNDDAAGRSQNR 450
Query: 177 RIEIQI 182
R+EI +
Sbjct: 451 RVEIFV 456
>gi|148261080|ref|YP_001235207.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|146402761|gb|ABQ31288.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
Length = 456
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 7/144 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATIL 103
+ LD+ Q ++ + V + I F +E LP++ I L
Sbjct: 310 NVLDRLRGFLQPEITKGEVAVLGTVNAPVIRINNTGLFASGSATVESTALPLISKIGQAL 369
Query: 104 NKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ + + +TDS NNL++S++RA + L + +R I+ G
Sbjct: 370 AREKG-KVQVIGYTDSQPIHTLRFPNNLVLSEDRAKAAAAVLDRAIGDQSR-ITAEGRGA 427
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF 183
PI TN T GR N+RIEI +
Sbjct: 428 ADPIATNATPQGRALNRRIEIVLI 451
>gi|218709383|ref|YP_002417004.1| putative outer membrane protein [Vibrio splendidus LGP32]
gi|218322402|emb|CAV18555.1| putative outer membrane protein [Vibrio splendidus LGP32]
Length = 204
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 75/196 (38%), Gaps = 9/196 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-D 60
+K L + + ++ + + + T D + + +
Sbjct: 1 MKLLKTILPLCFVVASANIMAETNDEFTYRALPSTTQSYDLEDDDNDGVINARDLCIDTQ 60
Query: 61 TGIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
G + G + ++ FL ++ +A L ++ +T I +Q
Sbjct: 61 IGAEIDNDGCGSYFESSEEKDLHILFANDSAEIKPVFLSQIRQMAAFLKRYENTSIQLQG 120
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ +G + NL +S+ERA ++ LI G+ +R +V G+ + NDT+ N
Sbjct: 121 YASKVGNAEYNLKLSEERAVNVRRALISNGIPPSRVYTV-GYGDAGFL-DNDTETNHALN 178
Query: 176 QRIEIQIFP-RGNIKK 190
+++ + +GNIK+
Sbjct: 179 RKVVASVVGFKGNIKE 194
>gi|149277661|ref|ZP_01883801.1| possible outer membrane protein [Pedobacter sp. BAL39]
gi|149231349|gb|EDM36728.1| possible outer membrane protein [Pedobacter sp. BAL39]
Length = 174
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 67/174 (38%), Gaps = 9/174 (5%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ + G L S + KKV + E + + +
Sbjct: 8 LLLAAVLLFGISLQSCKSKKVVAKPTPPVVA--------PKPEPVEEKQPEPEPAPEPAP 59
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + + + L+ +L + + K + + ++ + G++++NL
Sbjct: 60 VPEKASYNFNNIQFEFNSDVLKTASFEILDQVVREMKKDLTVGFVLNGNSSAEGSVEHNL 119
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S +RA+ + + +S++GF PI TND++ GR N+R+EI+
Sbjct: 120 SLSVDRANSV-KSYLVNAGIPAANLSIKGFGATKPITTNDSEEGRALNRRVEIK 172
>gi|209886401|ref|YP_002290258.1| OmpA/MotB domain protein [Oligotropha carboxidovorans OM5]
gi|209874597|gb|ACI94393.1| OmpA/MotB domain protein [Oligotropha carboxidovorans OM5]
Length = 160
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 62/174 (35%), Gaps = 30/174 (17%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+L + + ++ C + + + +
Sbjct: 8 KLAAVLVVALSVGACANKNGDLNGSGMAGAATPGSQQD---------------------- 45
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V +GD + + L ++ + L+ A L ++P I+ H D GT
Sbjct: 46 FVVNVGDRV-------FFESDQTELSQQAINTLEKQAQWLQQYPRYTFTIEGHADERGTR 98
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N+ + +RA ++++L RG++ +R ++ + + P+ + N+R
Sbjct: 99 EYNIALGAKRAQSVRNFLASRGINPSRMRTIS-YGKERPVAVCNDISCWSQNRR 151
>gi|229019729|ref|ZP_04176535.1| OmpA/MotB domain protein [Bacillus cereus AH1273]
gi|229025955|ref|ZP_04182345.1| OmpA/MotB domain protein [Bacillus cereus AH1272]
gi|228735356|gb|EEL85961.1| OmpA/MotB domain protein [Bacillus cereus AH1272]
gi|228741574|gb|EEL91768.1| OmpA/MotB domain protein [Bacillus cereus AH1273]
Length = 234
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 64/175 (36%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L + +K ++ + + K + + +
Sbjct: 55 LSASSLEVEQARKQEEARAEE-KKEMAELKALQKKIDQYINENQLSSAFQTKLTEKGLMV 113
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++ +L I + HTD++ +N +
Sbjct: 114 TILENVLFDSGKADVKLESLGIAKELSNLLVSASPREITVSGHTDNVPIANAQFASNWEL 173
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 174 STQRAVNFMQVLLQNKELQPEKFSTIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 228
>gi|83312309|ref|YP_422573.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
gi|82947150|dbj|BAE52014.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
Length = 161
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+GIV D + + L L A L +P+ + ++ H D
Sbjct: 39 SSGIVKGSKEDFVANVGDRVFFDFDKSSLRADAKATLDKQAAWLKAYPNYSLTVEGHADE 98
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + NL + ++RA+ + SYL G+++ R +V + + P+ + N+R
Sbjct: 99 RGTREYNLALGEKRANAVASYLKSAGIAAARVKTVS-YGKERPVALGSNEAAWSQNRR 155
>gi|254512183|ref|ZP_05124250.1| peptidoglycan-associated lipoprotein [Rhodobacteraceae bacterium
KLH11]
gi|221535894|gb|EEE38882.1| peptidoglycan-associated lipoprotein [Rhodobacteraceae bacterium
KLH11]
Length = 169
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 20/178 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ +T I+ C + +V GS D + Q +
Sbjct: 7 IAAAGALTLIAACSNNDPSALGGAGGAGANGTLVP---GSPSDPRSPAYFQQTVGDRV-- 61
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ V++ L + +LQ A L P V I+ H D GT +
Sbjct: 62 --------------LFAVNQSTLSPQAQTVLQGQADWLLANPDFVATIEGHADEQGTREY 107
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
NL + RA+ + YLI R + ++ + + PI+ T+ N+R +
Sbjct: 108 NLALGARRANAAREYLISR-GVAGNRLTTVSYGKERPIEICSTEECYSKNRRAVTVLT 164
>gi|90426219|ref|YP_534589.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
gi|90108233|gb|ABD90270.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 166
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 29/184 (15%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+L + + ++ C K L D + S
Sbjct: 12 KLAAVLAVALSMGACA------NKNPLGGGADGSLAGAATPGSQQDF------------- 52
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V +GD + + L + + L A L + I+ H D GT
Sbjct: 53 -VVNVGDRV-------FFESDQTDLSPQAIATLDKQAQWLQSYNRYSFTIEGHADERGTR 104
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N+ + RA +++YL RG+ S+R ++ + + P+ + N+R + +
Sbjct: 105 EYNIALGARRAQSVRTYLTSRGIDSSRMRTIS-YGKERPVAVCNDISCWSQNRRA-VTVL 162
Query: 184 PRGN 187
G+
Sbjct: 163 NAGS 166
>gi|255319448|ref|ZP_05360662.1| outer membrane protein [Acinetobacter radioresistens SK82]
gi|255303388|gb|EET82591.1| outer membrane protein [Acinetobacter radioresistens SK82]
Length = 486
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ V + P+L A +L + P+ V+ ++ HTD+ G+ N +S +R
Sbjct: 359 LNLEVIHFASGSAQVPDVNKPILDQAAALLQRVPNVVVTVKGHTDAEGSEAVNNNLSVQR 418
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
A + +YL+ R S + G+ P+ N T G+ N+RIE +I
Sbjct: 419 AQAVVNYLVSR-GVSPSKLQALGYGQDQPVTDNATSQGKFQNRRIEFEILNTDT 471
>gi|220918574|ref|YP_002493878.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956428|gb|ACL66812.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 242
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 58/165 (35%), Gaps = 6/165 (3%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + + + + + ++ G+ + +
Sbjct: 82 CPAGQTCQGERCVAREPGSCASDRDCGAGEKCQAGRCAAAAPEASVPPECAD----VTAF 137
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L + LQ +A L + P+ + +Q + D GT + N+ + RA+
Sbjct: 138 SVHFAFDRSNLTPESQQNLQKLADCLKQAPAKRVLVQGNCDERGTAQYNVALGNRRAESA 197
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K YL GVSS+ + + + P+ + T+ N+R + QI
Sbjct: 198 KKYLTDLGVSSS--VDTVSYGEEKPVCSEATEACWSKNRRDDFQI 240
>gi|71065468|ref|YP_264195.1| OmpA/MotB family outer membrane protein [Psychrobacter arcticus
273-4]
gi|71038453|gb|AAZ18761.1| outer membrane protein, OmpA/MotB family [Psychrobacter arcticus
273-4]
Length = 172
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 54/180 (30%), Gaps = 18/180 (10%)
Query: 3 KELGLSMFIMTTI--SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
K L++ + SGC + V V +D +
Sbjct: 7 KIAALAVLSSAVVLASGCATKRAISEVVVAPLGIPGGQVGYTGAVIVDNSNAVISGAENI 66
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + +L A +L PS + I HTD
Sbjct: 67 QAV---------------VYFAFDSSEITSQSAGVLNQHADLLKSNPSAGVVIAGHTDER 111
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ + N+ + + RA + YL + + I V + + P + N+R E+
Sbjct: 112 GSREYNIALGERRAQAARDYLAAQ-GVAANNIRVISYGEERPAAAGTNEDAYAQNRRAEL 170
>gi|322614563|gb|EFY11492.1| hypothetical protein SEEM315_18040 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620081|gb|EFY16953.1| hypothetical protein SEEM971_15751 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322623376|gb|EFY20215.1| hypothetical protein SEEM973_06161 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629326|gb|EFY26105.1| hypothetical protein SEEM974_10273 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632046|gb|EFY28800.1| hypothetical protein SEEM201_09439 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637216|gb|EFY33918.1| hypothetical protein SEEM202_19199 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322639968|gb|EFY36639.1| hypothetical protein SEEM954_15657 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322645904|gb|EFY42424.1| hypothetical protein SEEM054_14670 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322652397|gb|EFY48751.1| hypothetical protein SEEM675_07291 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322652601|gb|EFY48951.1| hypothetical protein SEEM965_20397 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660411|gb|EFY56647.1| hypothetical protein SEEM19N_20108 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664564|gb|EFY60757.1| hypothetical protein SEEM801_06607 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669383|gb|EFY65533.1| hypothetical protein SEEM507_01240 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322670929|gb|EFY67062.1| hypothetical protein SEEM877_06997 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678832|gb|EFY74887.1| hypothetical protein SEEM867_12360 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681861|gb|EFY77886.1| hypothetical protein SEEM180_16428 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687987|gb|EFY83953.1| hypothetical protein SEEM600_10746 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323194341|gb|EFZ79536.1| hypothetical protein SEEM581_21554 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197757|gb|EFZ82889.1| hypothetical protein SEEM501_21645 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203447|gb|EFZ88472.1| hypothetical protein SEEM460_07455 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206808|gb|EFZ91761.1| hypothetical protein SEEM020_02639 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323213373|gb|EFZ98174.1| hypothetical protein SEEM6152_07603 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214666|gb|EFZ99417.1| hypothetical protein SEEM0077_18540 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221803|gb|EGA06208.1| hypothetical protein SEEM0047_03122 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323230011|gb|EGA14131.1| hypothetical protein SEEM0052_01387 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233750|gb|EGA17839.1| hypothetical protein SEEM3312_07048 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238556|gb|EGA22614.1| hypothetical protein SEEM5258_09862 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244244|gb|EGA28253.1| hypothetical protein SEEM1156_09790 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246405|gb|EGA30388.1| hypothetical protein SEEM9199_12008 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252212|gb|EGA36065.1| hypothetical protein SEEM8282_14849 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323259875|gb|EGA43506.1| hypothetical protein SEEM8284_21890 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265110|gb|EGA48609.1| hypothetical protein SEEM8285_20494 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323272673|gb|EGA56080.1| hypothetical protein SEEM8287_15269 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 434
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 65/186 (34%), Gaps = 10/186 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
G+++ M T+ G + + V + + + + + ++
Sbjct: 250 GIALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPPVPVHKLRLKILLANEIARGL 309
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V F + + P++ A + + + + HTDS
Sbjct: 310 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA-VTVTGHTDSQP 368
Query: 122 TLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
S++RA + + L GV + R + + G P+ ND+K GR N+R
Sbjct: 369 IHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGR-VHIVGKGDTVPVADNDSKAGRAKNRR 427
Query: 178 IEIQIF 183
+EI +
Sbjct: 428 VEILVV 433
>gi|163787037|ref|ZP_02181484.1| membrane protein, OmpA family [Flavobacteriales bacterium ALC-1]
gi|159876925|gb|EDP70982.1| membrane protein, OmpA family [Flavobacteriales bacterium ALC-1]
Length = 531
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ IG + + V F + L+ + L L+ +A ++ S + I+ HTD +G+
Sbjct: 410 IGAIGAAMRLNLDSKVLFDSGKSELKPEGLLALKELAKNISVLKSGNVIIEGHTDDVGSS 469
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+NN +S RA + + L + S +G+ K P+ N+++ R N+R+EI I
Sbjct: 470 ENNKNLSLARAKSVSTELKKLIPSKTFKWREKGYGEKKPLVENNSEKNRTKNRRVEILIL 529
Query: 184 PR 185
P
Sbjct: 530 PN 531
>gi|57339664|gb|AAW49819.1| hypothetical protein FTT0831 [synthetic construct]
Length = 452
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 24/196 (12%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K +L L ++TT+S C + K +L+ E
Sbjct: 27 MKKLLKLCLMTSLITTLSACQTLDDKDKD-----------SGPLTFPTLEPCTAELLQSN 75
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-- 116
Q V + G + L + +L + L +T I+ +
Sbjct: 76 QSFICVKEQTGPDLIET--NIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAG 133
Query: 117 -------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
TD N+ +S+ RA ++ YL+ +G+ S+ I+++ Y+ PI ND+
Sbjct: 134 KVESKILTDQKILTDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDST 193
Query: 170 VGRQNNQRIEIQIFPR 185
R NQR+EI + R
Sbjct: 194 SSRAINQRVEITLKSR 209
>gi|323258027|gb|EGA41706.1| hypothetical protein SEEM8283_04036 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
Length = 418
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 65/186 (34%), Gaps = 10/186 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
G+++ M T+ G + + V + + + + + ++
Sbjct: 234 GIALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPPVPVHKLRLKILLANEIARGL 293
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V F + + P++ A + + + + HTDS
Sbjct: 294 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA-VTVTGHTDSQP 352
Query: 122 TLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
S++RA + + L GV + R + + G P+ ND+K GR N+R
Sbjct: 353 IHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGR-VHIVGKGDTVPVADNDSKAGRAKNRR 411
Query: 178 IEIQIF 183
+EI +
Sbjct: 412 VEILVV 417
>gi|237859129|gb|ACR23740.1| outer membrane lipoprotein p6 [Avibacterium paragallinarum]
gi|237859131|gb|ACR23741.1| outer membrane lipoprotein p6 [Avibacterium paragallinarum]
Length = 150
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/176 (13%), Positives = 55/176 (31%), Gaps = 34/176 (19%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
K+L + + ++ C + +
Sbjct: 4 FKKLLIVAGSVAVLAACSSSKHTETVAQTFG----------------------------- 34
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G V + + +E ++ +L A L P++ + ++ +TD G
Sbjct: 35 GYSVQDLQQ----RYNTVYFGFDKYNIEGEYQQILDAHAAYLTATPASKVLVEGNTDERG 90
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
T + N+ + Q RAD + + + +S + + P + T+ N+R
Sbjct: 91 TPEYNIALGQRRADAVAN-YLSAKGVQATQLSTVSYGEEKPAELGHTEAAYAKNRR 145
>gi|221210919|ref|ZP_03583899.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
gi|221169875|gb|EEE02342.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
Length = 218
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 6/163 (3%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV- 83
++ + + + + + I + + I I + F
Sbjct: 55 ERTRARLDDAVARTAEPQAPARVPAWVAQLEALKAGGRISLVKAPHGIEIGIDAGILFHV 114
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKS 139
+ L LP+L+ IA L + I ++ HTDS+ ++N +S RA +
Sbjct: 115 GDAHLLPDALPVLERIAQALGPHATGDILVEGHTDSVPIANAKYESNWELSSARAGAVVR 174
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
Y +R + ++ G A P+ D R N+R+ I +
Sbjct: 175 YFAER-GIAPHRLAAVGRADTQPLVAGDDASSRARNRRVTIFV 216
>gi|146300076|ref|YP_001194667.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146154494|gb|ABQ05348.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 727
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 71 MITCYIPVHVSFVSEVFLEK----KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ + L + L I IL +P+ AI HTD++G K N
Sbjct: 609 QLKMEAKSIFFTTGKATLSDAKMGETSGRLDAIKEILKNYPNAKFAINGHTDNVGNAKVN 668
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S++RA V+ LI++ + ++ +G+ P+ +N T GR N+R EI
Sbjct: 669 QKLSEQRAKVVMDLLIEK-GVNPANLTSKGYGASKPVKSNKTASGRAENRRTEIV 722
>gi|218510314|ref|ZP_03508192.1| peptidoglycan-associated lipoprotein [Rhizobium etli Brasil 5]
gi|327193465|gb|EGE60361.1| peptidoglycan-associated lipoprotein [Rhizobium etli CNPAF512]
Length = 177
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 50/173 (28%), Gaps = 25/173 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++ ++ C
Sbjct: 20 VMIALVAGLALASCAKKPPNSAGELGLGGGAGGAATPGSAQDF----------------- 62
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + L A L ++P+ I ++ H D GT +
Sbjct: 63 TVNVGDRI-------FFDTDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADERGTRE 115
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + RA K YL RGV + R ++ + + P+ D N+R
Sbjct: 116 YNLALGARRAAAAKDYLASRGVPAQRMKTIS-YGKERPVAVCDDISCWSQNRR 167
>gi|163732302|ref|ZP_02139748.1| hypothetical protein RLO149_02587 [Roseobacter litoralis Och 149]
gi|161394600|gb|EDQ18923.1| hypothetical protein RLO149_02587 [Roseobacter litoralis Och 149]
Length = 659
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 61/175 (34%), Gaps = 14/175 (8%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+E+K ++ K + + L V GD +
Sbjct: 487 QEEKARLEAEAARLTAETKNLEQYRSEFFGRLRDVL-GRQEGVRIEGDRFVFS-SEVLFE 544
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPS-------TVIAIQSHTDS-----IGTLKNNLLIS 130
+ L + + +A IL+ +I + HTD+ +G +N +S
Sbjct: 545 PARADLSAEGQQEIAKVARILSSIADEIPPEIDWIIRVDGHTDNLPLSGVGQFADNWELS 604
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
Q RA + Y+++ ++ GF P+ +T R N+RIE++ R
Sbjct: 605 QGRALSVVKYMVESLGIPPNRLAANGFGEFQPVAVENTPQARAQNRRIELKFTER 659
>gi|242278716|ref|YP_002990845.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242121610|gb|ACS79306.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 400
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 7/166 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ + + ++ A Q Q +
Sbjct: 240 SPPQNGNTIPQSTPTQQEQPVAKHATPKAAPAPVQSTTQAPKAQSKPRSINLAVQ----- 294
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
V ++ + +L + L I I HTDS + + N +S+ERA+ +K
Sbjct: 295 FDVDSSQIKPESYSLLNELGKALISDRLKDKRIVIGGHTDSDASPEYNFKLSKERAESVK 354
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
YL + + I GF P+ N TK + N+R+++ I P
Sbjct: 355 KYLTDNFPIAPQRIGTTGFGESNPLVPNTTKYNKLLNRRVQVSIAP 400
>gi|158422149|ref|YP_001523441.1| OmpA/MotB precursor [Azorhizobium caulinodans ORS 571]
gi|158329038|dbj|BAF86523.1| OmpA/MotB precursor [Azorhizobium caulinodans ORS 571]
Length = 164
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Query: 70 DMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ V F + L + +L A L ++ I+ H D GT + N+
Sbjct: 48 QEFVVSVGDRVFFDTDQTDLSPEARAILDRQAQWLQQYNRYTFTIEGHADERGTREYNIA 107
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +RA ++ YL RG+ R ++ + + P+ + N+R + P
Sbjct: 108 LGAKRAQNVRDYLASRGIDPARMRTIS-YGKERPVAVCNDISCWSQNRRAVTVLNP 162
>gi|21242652|ref|NP_642234.1| flagellar motor protein MotD [Xanthomonas axonopodis pv. citri str.
306]
gi|21108121|gb|AAM36770.1| MotB protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 324
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 61/170 (35%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+A++ + V L ++ + + + I + R I I
Sbjct: 105 SMAAQMRMPVSLRNQAQLARAQRQMDAVEQQLSKTLAPLIDKQLITIRRNDLWIEVEINS 164
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L + L +A +L + P+ + ++ +TD+ +N +S R
Sbjct: 165 DILFGTGSATLAGRARGTLSTLAAVLREAPNG-VRVEGYTDNQPIATAQFPSNWELSAAR 223
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + +++ G+ N T+ GR N+R+ + I
Sbjct: 224 AASVVHLFAD-DGIAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIIL 272
>gi|262199634|ref|YP_003270843.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262082981|gb|ACY18950.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 291
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 64/170 (37%), Gaps = 6/170 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+S E+ L + ++ + + F+ + + V + +P
Sbjct: 105 KSSAEELSQALSELGKRKAEAEKRVAQFRDLLNRFRSLIDAGKLKVKITDGRMILELPTD 164
Query: 80 VSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERA 134
V F L + + + I +L P I+ HTD++ +N ++ RA
Sbjct: 165 VLFASGRADLSEDGIVSITQIGEVLAAIPDRRYQIEGHTDNVPISTARYPSNWELAAARA 224
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ L + +S F P+ +N++ GR+ N+RIEI I P
Sbjct: 225 LTVLKTLREA-GMQGSTLSAASFGEFRPVASNNSDAGRRANRRIEIVIVP 273
>gi|262394173|ref|YP_003286027.1| outer membrane protein [Vibrio sp. Ex25]
gi|262337767|gb|ACY51562.1| outer membrane protein [Vibrio sp. Ex25]
Length = 204
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 74/195 (37%), Gaps = 8/195 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + + +F+++ ++ + E + + + I + + +
Sbjct: 1 MKPMKI-LFVLSLLAVTQQVAAEDEYDYRPVPSAEQIADLQDEDNDGVINARDMCPGTPE 59
Query: 62 GIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G V G + + + F ++ ++ L ++P+T I + +
Sbjct: 60 GSEVDNDGCGEYIKASDNMQVRILFANDSDEINPVFRRQVRELSDFLKEYPTTSIELHGY 119
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+G ++N +S+ RA ++ L+ + +R + + GF + +V N+
Sbjct: 120 ASKVGGSQHNQDLSERRARNVREALLSYNIEPSR-VRIVGFGDTHLAQQGTDEVSHALNR 178
Query: 177 RIEIQIFP-RGNIKK 190
R+ + +G IKK
Sbjct: 179 RVTASVVGYKGEIKK 193
>gi|227538215|ref|ZP_03968264.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227241924|gb|EEI91939.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 650
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ I + ++ + +L + + + P+ I + SHTDS G+ N+ +
Sbjct: 531 EGIVFVLDNIYYDFNKSDIRPDAAKVLDQLVNTMTENPTLQIELSSHTDSRGSDSYNMKL 590
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
S RA Y+I +G++ R +S +G+ ++ T+ Q N+R E+++
Sbjct: 591 SDRRAKSAVEYIISKGIAKERLVS-KGYGESKLVNECANGVKCTEEQHQANRRTEVKVL 648
>gi|170697801|ref|ZP_02888887.1| type VI secretion system OmpA/MotB family protein [Burkholderia
ambifaria IOP40-10]
gi|170137303|gb|EDT05545.1| type VI secretion system OmpA/MotB family protein [Burkholderia
ambifaria IOP40-10]
Length = 433
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
+ Q ++ + V F ++ P++ IA + K P
Sbjct: 296 LKQLLQGEIAAGTVSVDEDARHSAVTFRGDAMFKPGGASVQASMNPLVSKIAAEIAKVPG 355
Query: 109 TVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I +TD++ +N ++S+ERA ++ L GV +NR + G P+
Sbjct: 356 -KVTIIGYTDNVPIRSRHFASNQVLSEERATLVMQMLQAAGVPANR-LEAVGKGDADPVG 413
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T GR N+R+EI +
Sbjct: 414 DNRTAQGRAQNRRVEIDV 431
>gi|78060486|ref|YP_367061.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77965036|gb|ABB06417.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 220
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/219 (13%), Positives = 64/219 (29%), Gaps = 39/219 (17%)
Query: 2 IKELGLSMFIMTT-ISGCGLASR--------EKKKVFLHKSNDTDIVNKRFGSSLDKA-- 50
+K + L++ ++ C AS + ++ D + + + A
Sbjct: 1 MKNIHLALLASVVSLAACSSASGPTYNAYELQPREGIRTFRVDCHGILSSANTCMKVATR 60
Query: 51 ---EDEFQMQLQDTGIVVSRIGDMITCYIP------------------------VHVSFV 83
+ + T I
Sbjct: 61 MCGNEAVRTVDSTTPYRDGADPHSIVFQCGAAPAPVATAAAPAPAAVEKVSLTGDAYFAT 120
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L L + + + + +TD+ G+ +N ++S+ RAD + + ++
Sbjct: 121 DSAVLTSAATAALDTLLNQQGDKHFSRVEVDGYTDATGSDAHNQVLSKRRADAV-AGYLR 179
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G P +N+T GR N+R+EI +
Sbjct: 180 EHGLKAESFAATGHGETNPAASNETAEGRARNRRVEISL 218
>gi|332669308|ref|YP_004452316.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332338346|gb|AEE44929.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484]
Length = 377
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + L +A +L P+ + + HTDS+ + + N +S+
Sbjct: 265 IVLDAAVLFDFGSHAVRADARATLDAVAQVLADVPAARV--EGHTDSVSSDELNQALSER 322
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQI 182
RAD + + L +RGVS+ + +GF P+ N D GRQ N+R+EI +
Sbjct: 323 RADAVATALGERGVSAA--LETQGFGESRPVAPNEVDGVDNPAGRQLNRRVEIVV 375
>gi|289667244|ref|ZP_06488319.1| flagellar motor protein MotD [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 324
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 60/170 (35%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+A++ + V L ++ + + + I + R I I
Sbjct: 105 SMAAQMRMPVSLRNQAQLARAQRQMDAVEQQLSKTLAPLIDKKLITIRRNDLWIEVEINS 164
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L L +A++L P+ + ++ +TD+ +N +S R
Sbjct: 165 DILFGTGSAALASNARTTLSTLASVLRDAPNG-VRVEGYTDNQPIATAQFPSNWELSAAR 223
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + +++ G+ N T+ GR N+R+ + I
Sbjct: 224 AASVVHLFAD-DGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIIL 272
>gi|91792716|ref|YP_562367.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91714718|gb|ABE54644.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 209
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 60/174 (34%), Gaps = 8/174 (4%)
Query: 17 GCGLASR---EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
C + + + + S D E + ++ ++
Sbjct: 34 ACANSPKGVIVEANGCHQVELSVQQEPEIEPSDFDSMEQVQTAAITQNCVLDETSEFNLS 93
Query: 74 ----CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
I ++ + + P+L+ IA +L I + HTD IG+ N +
Sbjct: 94 ACDSIDIAPVYFEFAKSQVLQTQKPLLKKIA-MLANQSGAKITLVGHTDIIGSEAFNQNL 152
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S +RA + + L+ I G P D N T GRQ N+R+EI I
Sbjct: 153 SLKRAMNVSAVLVAEYGLMASDIHYYGVGSTEPADDNATANGRQANRRVEITIT 206
>gi|254489059|ref|ZP_05102263.1| type IV / VI secretion system protein, DotU family [Roseobacter sp.
GAI101]
gi|214042067|gb|EEB82706.1| type IV / VI secretion system protein, DotU family [Roseobacter sp.
GAI101]
Length = 478
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 7/145 (4%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
+D+ D+ ++ VS GD I + + F + P++ IAT+L
Sbjct: 333 QVDRVRDQLADEIAAGLTTVSEEGDFIAVRLGEALQFGEGAAVLASESPIIARIATVLEN 392
Query: 106 FPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
P I ++ H+D+ G K N +S RA + L Q +R +V G
Sbjct: 393 EPG-SIIVEGHSDNIPLSGRGRYKTNEELSAARAAAVSDVLAQYMSDPDRM-TVEGAGAS 450
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPR 185
P+ DT R N+R++I +
Sbjct: 451 KPLVRADTPEARSRNRRVDILLLKE 475
>gi|322421507|ref|YP_004200730.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320127894|gb|ADW15454.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 1714
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 72/225 (32%), Gaps = 46/225 (20%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ-- 57
M+K + L+ + +++G A+R + ++ T + A + +
Sbjct: 1 MVKHSIALTFLFLVSVAGAETAARAQ---SAPEAAQTATTPAVSAPAATAAAPKVREAAD 57
Query: 58 ------------------LQDTGIVVSRIGDM---------------ITCYIPVHVSFVS 84
L D + GD + +P
Sbjct: 58 CGATTEGHLQKDVTYTPWLLDPSVFAQDQGDRTEKRQVAEKEVKTVKVANLVPPIRFRTG 117
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI-------SQERADVI 137
+ + +++L +L+ + + + + H D+ S+ERA
Sbjct: 118 DAEITREYLELLRGVLEKMRGRNNVRLHFVGHADTQQLHGPLQEKFGDNTGLSRERAGTT 177
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
Y + IS G P+ +N T+ GR N+R+E+++
Sbjct: 178 AEYCQRALGLPPEAISYEGMGDGKPVASNSTEEGRALNRRVEVEV 222
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI-------SQERADVIKS 139
+ ++F ++ L + + +++D+ + I S+ A +
Sbjct: 283 TVPEEFQRQVRQTLDNLKGKQNIAVKFIAYSDTTPLEARDERIYGDQLGLSKAVARRVAL 342
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ +S+ G P+ +NDT GR N+R+
Sbjct: 343 AVQDGLKASDVSFQSDGLGGGNPVASNDTPQGRALNRRV 381
>gi|126734135|ref|ZP_01749882.1| hypothetical protein RCCS2_08249 [Roseobacter sp. CCS2]
gi|126717001|gb|EBA13865.1| hypothetical protein RCCS2_08249 [Roseobacter sp. CCS2]
Length = 536
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 13/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------ST 109
Q+ + + GD + L + IA IL
Sbjct: 397 QILEGQDRIRVEGDRFIFN-SEVLFQPGSATLSPAGEAEIANIADILRSIAADIPEGIDW 455
Query: 110 VIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
VI + HTD++ +N +SQ RA + ++ + R ++ GF P++
Sbjct: 456 VIRVDGHTDNVPIGSNSRFADNWELSQARALSVVRFMSEDLGIDPRRLAANGFGEFQPLN 515
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
+T R N+RIE+++ R
Sbjct: 516 PLNTAEARAQNRRIELKLTER 536
>gi|38422322|emb|CAE45324.1| unnamed protein product [Magnetospirillum gryphiswaldense]
gi|144897900|emb|CAM74764.1| Outer membrane protein and related peptidoglycan-associated (lipo)
[Magnetospirillum gryphiswaldense MSR-1]
Length = 163
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 1/115 (0%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
IV D I + L L A L K+P+ + I+ H D GT
Sbjct: 43 IVPGSEQDFIANVGDRVFFDFDKYALRADAKGSLDKQAAWLKKYPTYSLTIEGHADERGT 102
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NL + + RA+ +K YL+ GV + R ++ + + P+ + N+R
Sbjct: 103 REYNLALGERRANSVKEYLVGAGVPAARVKTIS-YGKERPVALGSNEAAWSQNRR 156
>gi|88812420|ref|ZP_01127670.1| flagellar motor protein [Nitrococcus mobilis Nb-231]
gi|88790427|gb|EAR21544.1| flagellar motor protein [Nitrococcus mobilis Nb-231]
Length = 312
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKF 92
+D ++ S+L K + F+ +++ I V++IG I + H SF L K F
Sbjct: 133 QPSDAAVEQARSNLIKLQSLFRQEIERGLIEVAQIGAQIVIRVREHGSFPSGSAKLIKPF 192
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSS 148
LP ++ I + VI I HTD++ ++N +S RA + L
Sbjct: 193 LPAVRKIGQAIRMTEGQVI-IAGHTDNVPIHNAQFRSNWDLSAARAISLLRALGAVEAVD 251
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
I+V G A PI +NDT R N+R+EI + ++
Sbjct: 252 ANRITVAGHADTRPIVSNDTPRHRARNRRVEIILVNGNGLE 292
>gi|91776302|ref|YP_546058.1| OmpA/MotB [Methylobacillus flagellatus KT]
gi|91710289|gb|ABE50217.1| OmpA/MotB [Methylobacillus flagellatus KT]
Length = 267
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 58/150 (38%), Gaps = 7/150 (4%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQ 97
+ + + + I +S+ + I V F ++ + +
Sbjct: 106 EQESISAMIATLNRALGNLATNGKISISKTSLGVRIDIADGVLFQAGSAAIKAEADAPIS 165
Query: 98 LIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
I IL I ++ HTD++ +N +S RA + +I+ G+ + R +S
Sbjct: 166 EITQILAD-QQYAIQVEGHTDNVPISNAQFPSNWELSSMRATSVVRKMIENGIDAAR-LS 223
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
G++ PI N T GR N+R+ I +
Sbjct: 224 AVGYSDTQPIADNQTAEGRAQNRRVSIMVL 253
>gi|255034413|ref|YP_003085034.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254947169|gb|ACT91869.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 248
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ ++ + + + + + I V T + P SE + + L+++A L
Sbjct: 115 TPIENSTERAREPVIEQNIPVLEDDIRATLHFP-----QSESDILPESGYELEILAGYLV 169
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ + I + HTD +G NLL+S +R D ++ YL+ + + + R I +GF P+
Sbjct: 170 RNAGSRIELMGHTDDVGDPFKNLLLSFDRVDEVRKYLVSKHIETTR-IRGKGFGSDLPVA 228
Query: 165 TNDTKVGRQNNQRIEIQIFP 184
ND + R+ N+R+EI+I P
Sbjct: 229 PNDCEANRRLNRRVEIRIVP 248
>gi|52140989|ref|YP_085838.1| flagellar motor protein MotB [Bacillus cereus E33L]
gi|51974458|gb|AAU16008.1| chemotaxis motB protein (Motility protein B) [Bacillus cereus E33L]
Length = 262
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S E+ K + K + + + +
Sbjct: 83 LSA-SSLEAEQAKKQEEAREKEKKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 141
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 142 TILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANSQFASNWEL 201
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 202 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 256
>gi|194335385|ref|YP_002017179.1| peptidoglycan-associated lipoprotein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194307862|gb|ACF42562.1| peptidoglycan-associated lipoprotein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 154
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + + L + L+ A + F + + I+ H D GT + NL + +
Sbjct: 44 ILPGLGDLFYDFDKSDLRADAVEQLKTNANWMQVFKNNSVIIEGHCDERGTNEYNLALGE 103
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA+ ++Y I G+ R +V + + P T T+ N+R
Sbjct: 104 RRANSARNYTINLGIDPVRLKTVS-YGEEKPFATGSTEEAWAQNRRAHFV 152
>gi|332994178|gb|AEF04233.1| TolC family type I secretion outer membrane protein [Alteromonas
sp. SN2]
Length = 616
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 3/151 (1%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFL 93
+ FG E + M + + + +++SF + + +++
Sbjct: 465 APGAMVDDFGCEASDPEPQ-TMNTPASAADFTLDDAQVLASFSINISFASNSSKISPEYV 523
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV-SSNRFI 152
L + L K+ + + I H G N +S+ RA + + LI+ +R I
Sbjct: 524 SSLSQVIDALEKYDNAGVIIHGHASLDGDAAYNQRLSERRASAVAALLIESTNDIDSRRI 583
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ G+ P+ ++ N+RIE I
Sbjct: 584 TSVGYGETRPLVDEESPAANAKNRRIEATII 614
>gi|126730914|ref|ZP_01746723.1| OmpA family protein [Sagittula stellata E-37]
gi|126708630|gb|EBA07687.1| OmpA family protein [Sagittula stellata E-37]
Length = 198
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 63/190 (33%), Gaps = 19/190 (10%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL-------------DKAE 51
+ L+ + +++ +A + + N IV +++ + D E
Sbjct: 12 IALTASLCLSVAAPAVAEDAGQTPIISTQNTRTIVGEQYIPGIWVDPDGCEHWVMDDGVE 71
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
L GI V R + + K IA +
Sbjct: 72 GYMDPHLDRKGIPVCRRSNTCGVMNTDQFFATDSYKISKHGQA---QIANFFRSSSAVGF 128
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I HTDS + N+ +S RA + G + VRG+ + P+ +N T G
Sbjct: 129 VIAGHTDSRASDAYNMKLSYNRALAVARVARAVGANITD---VRGYGERMPVASNATAAG 185
Query: 172 RQNNQRIEIQ 181
N+R+EI
Sbjct: 186 MAKNRRVEIL 195
>gi|186471751|ref|YP_001863069.1| DotU family type IV/VI secretion system protein [Burkholderia
phymatum STM815]
gi|184198060|gb|ACC76023.1| type IV / VI secretion system protein, DotU family [Burkholderia
phymatum STM815]
Length = 429
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 51/138 (36%), Gaps = 7/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ + ++ + V + V + P++ IA + K P
Sbjct: 292 LKTLLKDEIAAGTVSVDEDAKHSAVTFRGDSMFPPGGVAVNTSMGPLIAKIAAEIVKVPG 351
Query: 109 TVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ + +TD++ + S ERA + L GV ++R + G P+
Sbjct: 352 -KVTVLGYTDNLPIHSHAFASNDALSAERATQVLQMLQADGVPASR-LEAMGKGEADPVA 409
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T GR N+R+EI +
Sbjct: 410 DNSTPQGRAQNRRVEIHV 427
>gi|86748938|ref|YP_485434.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86571966|gb|ABD06523.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 165
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 59/183 (32%), Gaps = 30/183 (16%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+L + + ++ C K + + +
Sbjct: 12 KLAAVLAVALSMGACA---NNKTGLGADGAMASAASPGSQQDF----------------- 51
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V +GD + + L + + L A L + I+ H D GT
Sbjct: 52 -VVNVGDRV-------FFESDQTDLSPQAIATLDKQAQWLQSYNRYSFTIEGHADERGTR 103
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N+ + RA +++YL RG+ +R ++ + + P+ + N+R + +
Sbjct: 104 EYNIALGARRAQSVRNYLASRGIDPSRMRTIS-YGKERPVAVCNDISCWSQNRRA-VTVL 161
Query: 184 PRG 186
G
Sbjct: 162 NAG 164
>gi|302878266|ref|YP_003846830.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
ES-2]
gi|302581055|gb|ADL55066.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
Length = 281
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 58/155 (37%), Gaps = 11/155 (7%)
Query: 39 VNKRFGSSLDKAEDEFQMQ----LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
++ + + + + + + V + + I F E L+
Sbjct: 86 QQRKIQAQMKAVDASLREVMGPLIAQGLVGVHQTKRGVVVDISASTLFREGEEKLQPGAQ 145
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSN 149
LQ +A +L++ + + ++ HTD + +N +S RA + L+
Sbjct: 146 ETLQQVAVVLSR-ENQSVEVEGHTDDVPIKTTQFPSNWELSSGRASSVVRTLVT-YGVPE 203
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ ++ G A P+ NDT R N+R+ I I
Sbjct: 204 KRLAAVGMAANQPVVANDTPENRAKNRRVSITILS 238
>gi|28871116|ref|NP_793735.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|71736967|ref|YP_275906.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257487003|ref|ZP_05641044.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|289626503|ref|ZP_06459457.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289650949|ref|ZP_06482292.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298488202|ref|ZP_07006238.1| peptidoglycan-associated outer membrane lipoprotein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|301384813|ref|ZP_07233231.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tomato Max13]
gi|302063533|ref|ZP_07255074.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tomato K40]
gi|302130603|ref|ZP_07256593.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|28854366|gb|AAO57430.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|71557520|gb|AAZ36731.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298157260|gb|EFH98344.1| peptidoglycan-associated outer membrane lipoprotein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|320323045|gb|EFW79134.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329683|gb|EFW85672.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330868619|gb|EGH03328.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330872646|gb|EGH06795.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330877972|gb|EGH12121.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330964831|gb|EGH65091.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330988976|gb|EGH87079.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331009355|gb|EGH89411.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|331016446|gb|EGH96502.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 166
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ S + I L+ + + L + A L + ++ +TD
Sbjct: 47 GAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRSLDVHAKDLKAN-GARVVLEGNTDER 105
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA ++ YL+ + S + + + + P+ T + + N+R+E+
Sbjct: 106 GTREYNMALGERRAKAVQRYLVLQ-GVSPAQLELVSYGEERPVATGNDEQSWAQNRRVEL 164
Query: 181 Q 181
+
Sbjct: 165 R 165
>gi|71279065|ref|YP_267707.1| ompA family protein [Colwellia psychrerythraea 34H]
gi|71144805|gb|AAZ25278.1| ompA family protein [Colwellia psychrerythraea 34H]
Length = 352
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 61 TGIVVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ V G + V V + ++ + + +Q +A + ++ +T + I+
Sbjct: 215 ANVKVDSSGCPLFLDTAVDVDLNVAFENNSSQIKAETMNDIQRLADFMKEYKNTSVVIEG 274
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
H+ + G+ K NL +SQ+RAD +KS LI + +S +GF I +T + N
Sbjct: 275 HSSAAGSAKYNLALSQKRADAVKSLLINKFDIEESRLSAKGFGETQLISKGNTAADHELN 334
Query: 176 QRIEIQIFPRGNIKK 190
+R+ +I +KK
Sbjct: 335 RRVIAKI--EATVKK 347
>gi|71064857|ref|YP_263584.1| OmpA family outer membrane protein [Psychrobacter arcticus 273-4]
gi|71037842|gb|AAZ18150.1| possible outer membrane protein, OmpA family [Psychrobacter
arcticus 273-4]
Length = 533
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 1/156 (0%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+ + + + + + + G + V V +
Sbjct: 328 QAAAPAMTVIAEGPLNEQTEIADSLTASEAAMDNLGQNPDPRDVARALSLQVVNFEVDKA 387
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ +L ++ + P+ + I HTD NL +S+ERA +K+YL+ +G
Sbjct: 388 LIPDANKALLDRAVKLMEQVPNMTLMIIGHTDKTADAAYNLKLSEERAQAMKAYLVAQGA 447
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ ++ +G PI N T GR N+RIE +
Sbjct: 448 DPSKLMT-KGMGETDPIADNTTDQGRFRNRRIEFVV 482
>gi|114562640|ref|YP_750153.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114333933|gb|ABI71315.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 178
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 51/174 (29%), Gaps = 8/174 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + + C S + S G Q
Sbjct: 8 KAMLVAVPLMALGACSSTSDSETDANGSMSGTGSEYGNG-GIETGGVAPVLSSAEQQRLK 66
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
I ++ + ++Q L + P+ + I+ H D GT
Sbjct: 67 EQELRRQNII------YFDFDRSEVQSENAEIIQAHGNYLVEHPNVRVLIEGHADERGTP 120
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N+ + + RA I +Q +S+ + + P+D + G N+R
Sbjct: 121 EYNIALGERRAKAIAK-YLQGMGVQPSQMSIVSYGEEKPLDYSRNDTGFAKNRR 173
>gi|293194235|ref|ZP_06609957.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus
F0309]
gi|292819754|gb|EFF78767.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus
F0309]
Length = 235
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 9/129 (6%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
++ V G +IT + + + L +AT+LN I HTDS
Sbjct: 107 ESLKPVESCGTVITLE-DGVLFDFGKSDIRSDAAHTLSKLATVLNDAKVPAAHIYGHTDS 165
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQ 173
I NL +SQERAD + + L + GV + + G+ P+ N D GR
Sbjct: 166 ISDEAFNLQLSQERADAVSAELKKDGV--SAILDATGYGESKPVAPNENADGSDNPAGRA 223
Query: 174 NNQRIEIQI 182
N+R+EI I
Sbjct: 224 LNRRVEIFI 232
>gi|294624200|ref|ZP_06702921.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294665070|ref|ZP_06730375.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292601500|gb|EFF45516.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292605151|gb|EFF48497.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 324
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 62/170 (36%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+A++ + V L ++ + + + I + R I I
Sbjct: 105 SMAAQMRMPVSLRNQAQLARAQRQMDAVEQQLSKTLAPLIDKQLITIRRNDLWIEVEINS 164
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L + L +A++L + P+ + ++ +TD+ +N +S R
Sbjct: 165 DILFGTGSATLAGRARGTLSTLASVLREAPNG-VRVEGYTDNQPIATAQFPSNWELSAAR 223
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + +++ G+ N T+ GR N+R+ + I
Sbjct: 224 AASVVHLFAD-DGIAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIIL 272
>gi|254486344|ref|ZP_05099549.1| flagellar motor protein [Roseobacter sp. GAI101]
gi|214043213|gb|EEB83851.1| flagellar motor protein [Roseobacter sp. GAI101]
Length = 598
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 62/185 (33%), Gaps = 14/185 (7%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
T ++ R + ++ + + K + + L V GD
Sbjct: 416 TALARVAAEERRRAELEAAERKRLEAETKNLEQYRSEFFGRLRD-LLGNQAGVRIEGDRF 474
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDSI----- 120
+ L + +A IL VI + HTD+
Sbjct: 475 VFS-SEVLFPPGAAQLSTDGQREIAKVAEILRNIAADIPPEIDWVIRVDGHTDNQPLSGL 533
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G +N +SQ RA + Y+I + ++ GF P+ D++ R N+RIE+
Sbjct: 534 GAFADNWELSQARALSVVKYMINFLGIAPDRLAANGFGQYQPVAEGDSESARAQNRRIEL 593
Query: 181 QIFPR 185
++ +
Sbjct: 594 KLTEK 598
>gi|104780439|ref|YP_606937.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
gi|95109426|emb|CAK14127.1| putative outer memebrane protein, OmpA family [Pseudomonas
entomophila L48]
Length = 239
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 70 DMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
++IT V F LE L + LN I + HTDS+G+ N
Sbjct: 126 EVITLDDQGQVLFAFNSDRLEAGAQERLHNLLPKLNDPSVLSIKVIGHTDSVGSDSYNQG 185
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S+ RA + YLI + + ++ +G P+ NDT+ GR +N+R+E+ +
Sbjct: 186 LSERRASSVAEYLISQ-GLAPEKVTSQGRGESEPVADNDTEEGRAHNRRVELHL 238
>gi|38327415|gb|AAR17735.1| motility protein B [Bdellovibrio bacteriovorus]
Length = 248
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 57/157 (36%), Gaps = 7/157 (4%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
K V SLDK+ D Q +L + +G I L+
Sbjct: 87 PKKGGPGEVEDYVERSLDKSMDSAQKKLAIQDVYHDAVGVRIALAA-STFFQEGSAKLKP 145
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGV 146
+ L L + +L I I+ HTD + +N ++ RA + YL++
Sbjct: 146 EALKXLDKV-DVLKTHKK-RIIIEGHTDDLPIAGTLFPSNWELAGGRASAVVRYLVKVHQ 203
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + P+ ND+ R N+RIEI I
Sbjct: 204 MDPKRFVSLSYGDQKPVVPNDSDEHRAMNRRIEIFIV 240
>gi|319899363|ref|YP_004159460.1| Outer membrane lipoprotein omp16 homolog precursor [Bartonella
clarridgeiae 73]
gi|319403331|emb|CBI76890.1| Outer membrane lipoprotein omp16 homolog precursor [Bartonella
clarridgeiae 73]
Length = 172
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 71/184 (38%), Gaps = 25/184 (13%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + ++ + GCG + + N + + N + GSS D
Sbjct: 12 LVVVFCVLLALVGCGKKNIDATNRMNSSLNGSGLNNVQAGSSQD---------------- 55
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
T + V F + +E +L A L ++P + I+ H D GT
Sbjct: 56 -------FTVNVGDRVFFSLNSSSIELDAEYILARQAEWLLRYPHYFVTIEGHADERGTR 108
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ NL + Q RA ++ +LI GVSS R ++ + + P+ D N+R + +
Sbjct: 109 EYNLALGQRRAVAVRDHLISLGVSSQRMKTIS-YGKERPVALCDDISCWNQNRRAVLVVN 167
Query: 184 PRGN 187
GN
Sbjct: 168 TMGN 171
>gi|270263877|ref|ZP_06192145.1| OmpA/MotB domain-containing protein [Serratia odorifera 4Rx13]
gi|270042070|gb|EFA15166.1| OmpA/MotB domain-containing protein [Serratia odorifera 4Rx13]
Length = 165
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 56/180 (31%), Gaps = 27/180 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + + ++GC + E LQ G
Sbjct: 13 LAMMFVALLALAGCQSKPQ-------------------------GLTPEQVALLQSQGFK 47
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
++ G + + L + +Q + L T + HTD+ G
Sbjct: 48 LTDNGWEFGLS-DKVLFGNNIGKLNPESTETVQKMGRALMSVGITKFRLDGHTDNYGEDS 106
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +S RA+ + L+ I RG + P+ N T GR N+R+ I + P
Sbjct: 107 YNDQLSLRRANAVAD-LLASVGIPRANIETRGMGKRDPVADNRTSSGRAENRRVAIVVTP 165
>gi|256424721|ref|YP_003125374.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256039629|gb|ACU63173.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 677
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 58/167 (34%), Gaps = 12/167 (7%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV------S 81
V + + T+ L+K E E + + IG +
Sbjct: 510 VAVTTNGLTESAVLHRDLYLEKIEVETVVNKPKEPVPAKGIGAPRKIELGNKFNPQNIYF 569
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ + + L + ++ + + + + HTDS N+ +SQ RA +Y
Sbjct: 570 DLGKADIRPDVAKELDKLIALMKENANWKVDMSFHTDSRSDDNYNMKLSQRRATSTLNYF 629
Query: 142 IQRGVSSNRFISVRGFAYKYPID-----TNDTKVGRQNNQRIEIQIF 183
+ + + ++ +G+ I+ N T+ + N+R E +
Sbjct: 630 LSK-GIDKKRLTAKGYGETKLINRCANGVNCTEEEHKANRRAEFTVL 675
>gi|183222583|ref|YP_001840579.1| putative outer-membrane protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912618|ref|YP_001964173.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167777294|gb|ABZ95595.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167781005|gb|ABZ99303.1| Putative outer-membrane protein; putative signal peptide
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 670
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M ++T + + + D Y + +E L + L L+A L +
Sbjct: 538 EKLAEMSGKETVLYLRNVKDFDDLYNTIIYFPFNERTLSDEDKKKLDLLADFLIHHKNEK 597
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ I HTD+IG + N+ +S++RA + YL +GV R V+ + Y PI N+T+
Sbjct: 598 VEIGGHTDNIGNKEYNINLSEDRALSVYQYLRLKGVPKERM-KVQAYHYSQPIADNETEE 656
Query: 171 GRQNNQRIEIQ 181
GR N+R+ +
Sbjct: 657 GRSRNRRVNFK 667
>gi|328676430|gb|AEB27300.1| Outer membrane lipoprotein omp16 precursor [Francisella cf.
novicida Fx1]
Length = 417
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 24/196 (12%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K +L L ++TT+S C + K +L+ E
Sbjct: 1 MKKLLKLCLMTSLLTTLSACQTLDDKDKD-----------SGPLTFPTLEPCTAELLQSN 49
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-- 116
Q V + G + L + +L + L +T I+ +
Sbjct: 50 QSFICVKEQTGPDLIET--NIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAG 107
Query: 117 -------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
TD N+ +S+ RA ++ YL+ +G+ S+ I+++ Y+ PI ND+
Sbjct: 108 KVESKILTDQKILTDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDST 167
Query: 170 VGRQNNQRIEIQIFPR 185
R NQR+EI + R
Sbjct: 168 SSRAINQRVEITLKSR 183
>gi|76818070|ref|YP_336766.1| hypothetical protein BURPS1710b_A1609 [Burkholderia pseudomallei
1710b]
gi|126457603|ref|YP_001074182.1| hypothetical protein BURPS1106A_A0139 [Burkholderia pseudomallei
1106a]
gi|134280945|ref|ZP_01767655.1| SciP protein [Burkholderia pseudomallei 305]
gi|167826573|ref|ZP_02458044.1| hypothetical protein Bpseu9_23060 [Burkholderia pseudomallei 9]
gi|167848091|ref|ZP_02473599.1| hypothetical protein BpseB_22661 [Burkholderia pseudomallei B7210]
gi|167905011|ref|ZP_02492216.1| hypothetical protein BpseN_22374 [Burkholderia pseudomallei NCTC
13177]
gi|167913331|ref|ZP_02500422.1| hypothetical protein Bpse112_22785 [Burkholderia pseudomallei 112]
gi|226198766|ref|ZP_03794330.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|242313911|ref|ZP_04812928.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|254189633|ref|ZP_04896143.1| SciP protein [Burkholderia pseudomallei Pasteur 52237]
gi|254195529|ref|ZP_04901957.1| SciP protein [Burkholderia pseudomallei S13]
gi|76582543|gb|ABA52017.1| OmpA family membrane protein [Burkholderia pseudomallei 1710b]
gi|126231371|gb|ABN94784.1| OmpA family protein [Burkholderia pseudomallei 1106a]
gi|134247967|gb|EBA48051.1| SciP protein [Burkholderia pseudomallei 305]
gi|157937311|gb|EDO92981.1| SciP protein [Burkholderia pseudomallei Pasteur 52237]
gi|169652276|gb|EDS84969.1| SciP protein [Burkholderia pseudomallei S13]
gi|225929206|gb|EEH25229.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|242137150|gb|EES23553.1| OmpA family protein [Burkholderia pseudomallei 1106b]
Length = 433
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V + E + + P+L +A + + +
Sbjct: 300 LKNEIARGLLTVDEDDRRSVVVFRGDSMFRSGESRVLPEIEPVLDKVAREVARVGG-RVT 358
Query: 113 IQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ H+D+ + NNL++S++RA + L+QRG ++R I G P+ N T
Sbjct: 359 VTGHSDNQPIRRADIPNNLVLSEKRAAYVAQILVQRGTPADR-IRSEGRGDAQPVAENAT 417
Query: 169 KVGRQNNQRIEIQIF 183
GR N+R+EI +
Sbjct: 418 PAGRSRNRRVEIAVT 432
>gi|302341627|ref|YP_003806156.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
gi|301638240|gb|ADK83562.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
Length = 361
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 50/116 (43%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
S + + + ++ + P LQ IA +L P+ I + HTD+ G
Sbjct: 244 SNLDSQGRIALYGVHFDFDKAVVKPESRPTLQEIAALLAADPALEILVVGHTDNQGGFAY 303
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N+ +SQ RA + L + ++ G P +ND++ GR N+R+E+
Sbjct: 304 NVELSQRRAQAVVKALTGDFGVAPGRLTPFGAGMAAPTASNDSEEGRAKNRRVELV 359
>gi|229105135|ref|ZP_04235786.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28]
gi|228678316|gb|EEL32542.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28]
Length = 233
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 64/175 (36%), Gaps = 7/175 (4%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L S + KK ++ + + + + + +
Sbjct: 55 LSANSLESEQIKKNA--EAEVKQQEMNELKAVQKGIDKYIEEKQLSSSFKTDLTEKGLMV 112
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++ +L I + HTD++ +N +
Sbjct: 113 TILENVLFDSGKADVKLESLGIAKEMSNLLVSASPREITVSGHTDTVPIANAQFASNWEL 172
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT G+ N+R+E+ I P
Sbjct: 173 STQRAVNFMQVLLQNKDLQPGKFSAIGYGEYRSIAPNDTPEGKAKNRRVEVFILP 227
>gi|254467608|ref|ZP_05081017.1| OmpA family protein [Rhodobacterales bacterium Y4I]
gi|206684356|gb|EDZ44840.1| OmpA family protein [Rhodobacterales bacterium Y4I]
Length = 474
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 7/147 (4%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATI 102
+ K + ++++ + V + G+ + + F S L K F + +A
Sbjct: 327 EEQVAKVAGFLEPEIKEGIVQVFQKGNTLIIRLTGSGMFGSGSDQLSKAFRNPVNRVAEA 386
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
LN I + H+D++ + N+ +S RA + + + +R +S G A
Sbjct: 387 LNDEKG-KIIVAGHSDNVPIRSSRFPSNMALSLARAKSVMAGMANVMTDPDR-LSAEGRA 444
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPR 185
K PI N T+ GR N+RIEI +
Sbjct: 445 DKEPIADNSTRDGRAKNRRIEILLVQE 471
>gi|254249294|ref|ZP_04942614.1| Outer membrane protein [Burkholderia cenocepacia PC184]
gi|124875795|gb|EAY65785.1| Outer membrane protein [Burkholderia cenocepacia PC184]
Length = 263
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 40/112 (35%), Gaps = 1/112 (0%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
L + L +AI TDS G+ +N +S
Sbjct: 150 RQVLLQGDANFATDSAALTSQARNDLDRFIAANRGVEFARVAITGFTDSTGSAAHNRTLS 209
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ RA + +YL R S G P+ +N T GR N+R+EI++
Sbjct: 210 EARARTVVNYLRSN-GLQARSFSAEGLGAADPVASNATADGRAQNRRVEIRL 260
>gi|24376330|ref|NP_720438.1| outer membrane protein A [Shewanella oneidensis MR-1]
gi|24345232|gb|AAN53038.1| outer membrane protein OmpA [Shewanella oneidensis MR-1]
Length = 342
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + L + + L + P+ I HTDS G+ K N +S+ RA
Sbjct: 230 NSLLFAHNSSVLNNTSQFA--DVVSFLKQHPTASAVITGHTDSTGSDKYNQWLSERRAIS 287
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ +YL+ + + ++ G + N T+ GR N+R+EI I P + K
Sbjct: 288 VANYLVSQ-GVQSAQLTSVGKGETASVADNTTENGRAMNRRVEITI-PEFTVTK 339
>gi|328468979|gb|EGF39939.1| putative outer membrane protein [Vibrio parahaemolyticus 10329]
Length = 206
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 67/193 (34%), Gaps = 7/193 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L + ++ +A E + + + A D +
Sbjct: 4 MK--LLLALSVIAVTQQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAGS 61
Query: 62 GIVVSRIGDMITCYIPVHV---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ G+ I + V + F ++ ++ L +P+T I +Q +
Sbjct: 62 EVDNDGCGEYIKASEKMQVRVLFANDSDEINPVFRRQIRELSEFLKDYPTTSIELQGYAS 121
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G K+N +S+ RA ++ L+ + + GF + + +V N+R+
Sbjct: 122 KTGDSKHNQDLSERRAKNVRDALLS-YGIEPNRVRIIGFGDTHLAEQGTDQVSHALNRRV 180
Query: 179 EIQIFP-RGNIKK 190
+ +G +KK
Sbjct: 181 TASVVGYKGKVKK 193
>gi|289549271|ref|YP_003474259.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484]
gi|289182888|gb|ADC90132.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484]
Length = 335
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVV-SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQL 98
+ + K E + + Q++ I + + +P V F + ++K+++P+L
Sbjct: 186 EGLECYVGKREVVKEEEPQESPISTGEKTVEREYLMVPARVHFEFNSYTIKKEYIPLLLE 245
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A IL + P + I+ +TD+IG+ + N ++ +RA + +++ I + GF
Sbjct: 246 VARILKENPQIRVRIEGYTDNIGSKEYNEKLAFKRAKAVAD-FLKKQGVPQDKIEIAGFG 304
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIF 183
+ I N T +GR N+R + +
Sbjct: 305 KEGYIAPNTTPIGRFTNRRADFIVI 329
>gi|124008177|ref|ZP_01692874.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123986276|gb|EAY26098.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 515
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 50/141 (35%), Gaps = 6/141 (4%)
Query: 55 QMQLQDTGIVVSRIGDM------ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ + I V + + + + + K +L I IL K P
Sbjct: 375 RDTIATDPIKVDNVPPKNLTTRDLEILKSTAYFYYTNDDINKATESLLNDIVVILKKHPD 434
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ ++ HT +IG ++ ER + + G+ K P+ +N T
Sbjct: 435 IYLELEGHTCNIGETEDANQNLSERRASAVKKYLVNKGIDENRLKTVGYGSKRPVASNKT 494
Query: 169 KVGRQNNQRIEIQIFPRGNIK 189
+ G+ N+R++ ++ K
Sbjct: 495 EFGKIRNRRVKFKLVKTEKKK 515
>gi|77747768|ref|NP_636149.2| hypothetical protein XCC0758 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|77761295|ref|YP_244539.2| hypothetical protein XC_3475 [Xanthomonas campestris pv. campestris
str. 8004]
Length = 403
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 73 TCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + F + + +L +A L K + ++ HTD+ G N +S+
Sbjct: 288 VITLSDRILFDFDKADIRPDAARVLDTLAAALGKVSVAQMEVRGHTDAKGGDDYNQALSE 347
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQI 182
RA+ + + L RG + + S +G+ P+ N D GRQ N+R+E+ +
Sbjct: 348 RRANAVLAALRTRGTAQS--ASAKGYGESQPLAPNTVKGQDNPGGRQLNRRVELFL 401
>gi|89255751|ref|YP_513113.1| OmpA family protein [Francisella tularensis subsp. holarctica LVS]
gi|115314245|ref|YP_762968.1| OmpA family protein [Francisella tularensis subsp. holarctica
OSU18]
gi|167009203|ref|ZP_02274134.1| possible OmpA family protein [Francisella tularensis subsp.
holarctica FSC200]
gi|169656511|ref|YP_001427779.2| OmpA family protein [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|187931246|ref|YP_001891230.1| OmpA family protein [Francisella tularensis subsp. mediasiatica
FSC147]
gi|254367123|ref|ZP_04983156.1| outer membrane protein ompA [Francisella tularensis subsp.
holarctica 257]
gi|89143582|emb|CAJ78765.1| OmpA family protein [Francisella tularensis subsp. holarctica LVS]
gi|115129144|gb|ABI82331.1| possible OmpA family protein [Francisella tularensis subsp.
holarctica OSU18]
gi|134252946|gb|EBA52040.1| outer membrane protein ompA [Francisella tularensis subsp.
holarctica 257]
gi|164551579|gb|ABU60823.2| OmpA family protein [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|187712155|gb|ACD30452.1| OmpA family protein [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 417
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 24/196 (12%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K +L L ++TT+S C + K +L+ E
Sbjct: 1 MKKLLKLCLMTSLLTTLSACQTLDDKDKD-----------SGPLTFPTLEPCTAELLQSN 49
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-- 116
Q V + G + L + +L + L +T I+ +
Sbjct: 50 QSFICVKEQTGPDLIET--NIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAG 107
Query: 117 -------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
TD N+ +S+ RA ++ YL+ +G+ S+ I+++ Y+ PI ND+
Sbjct: 108 KVESKILTDQKILTDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDST 167
Query: 170 VGRQNNQRIEIQIFPR 185
R NQR+EI + R
Sbjct: 168 SSRAINQRVEITLKSR 183
>gi|28898409|ref|NP_798014.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
2210633]
gi|260895070|ref|ZP_05903566.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|260900920|ref|ZP_05909315.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|308094379|ref|ZP_05888926.2| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|28806626|dbj|BAC59898.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308086027|gb|EFO35722.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308093578|gb|EFO43273.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308110719|gb|EFO48259.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
Length = 206
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 67/193 (34%), Gaps = 7/193 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L + ++ +A E + + + A D +
Sbjct: 4 MK--LLLALSVIAVTQQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAGS 61
Query: 62 GIVVSRIGDMITCYIPVHV---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ G+ I + V + F ++ ++ L +P+T I +Q +
Sbjct: 62 EVDNDGCGEYIKASEKMQVRVLFANDSDEINPVFRRQIRELSDFLKDYPTTSIELQGYAS 121
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G K+N +S+ RA ++ L+ + + GF + + +V N+R+
Sbjct: 122 KTGGSKHNQDLSERRAKNVRDALLS-YGIEPNRVRIIGFGDTHLAEQGTDQVSHALNRRV 180
Query: 179 EIQIFP-RGNIKK 190
+ +G +KK
Sbjct: 181 TASVVGYKGKVKK 193
>gi|330892247|gb|EGH24908.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. mori
str. 301020]
Length = 150
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 56/172 (32%), Gaps = 26/172 (15%)
Query: 13 TTISGCGLASREKKKV---FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
GC + + GS + E +
Sbjct: 1 AVAVGCSSKGGDNAGAGGAVDPNAGYGANTGAVDGSLSE--EAALRA------------- 45
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
I L+ + + L + A L + ++ +TD GT + N+ +
Sbjct: 46 ------ITTFYFEYDSSDLKPEAMRSLDVHAKDLKAN-GARVVLEGNTDERGTREYNMAL 98
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ RA ++ YL+ + S + + + + P+ T + + N+R+E++
Sbjct: 99 GERRAKAVQRYLVLQ-GVSPAQLELVSYGEERPVATGNDEQSWAQNRRVELR 149
>gi|301056021|ref|YP_003794232.1| motility protein B [Bacillus anthracis CI]
gi|300378190|gb|ADK07094.1| motility protein B [Bacillus cereus biovar anthracis str. CI]
Length = 262
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S E+ K + K + + + +
Sbjct: 83 LSA-SSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 141
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 142 TILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWEL 201
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I N+T+ G+ N+R+E+ I P
Sbjct: 202 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNNTQEGKAKNRRVEVFILP 256
>gi|294139759|ref|YP_003555737.1| OmpA family protein [Shewanella violacea DSS12]
gi|293326228|dbj|BAJ00959.1| OmpA family protein [Shewanella violacea DSS12]
Length = 361
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 59/148 (39%), Gaps = 2/148 (1%)
Query: 37 DIVNKRFGSSLDKAEDEFQM-QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
D N +D+ D Q+ G V + + ++ +
Sbjct: 206 DSDNDGVADDMDQCADTSANHQVDANGCTVYTETTEQR-DVGSIQFANNSSAVKTESFER 264
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
++ +AT +N P + + I H ++G N+++S +RA + L+++ S + +
Sbjct: 265 IEKLATYMNTNPKSTVLISGHASNVGKADYNMILSDKRAKAVAKILVEKFGISQDRVEAK 324
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
GF PI + + N+RIE Q+
Sbjct: 325 GFGVTQPIIQGRSVEANKANRRIEAQVT 352
>gi|260597012|ref|YP_003209583.1| hypothetical protein CTU_12200 [Cronobacter turicensis z3032]
gi|260216189|emb|CBA29047.1| hypothetical protein CTU_12200 [Cronobacter turicensis z3032]
Length = 424
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 71/189 (37%), Gaps = 10/189 (5%)
Query: 4 ELGLSMFIMTTIS---GCGLASREKKKVFLHK--SNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L++ ++ GC ++ F + + V + + + + ++
Sbjct: 236 RVSLAVCSFLVVALFLGCKYYLSMPQESFRQQLLAMQRLPVTEPRPAERLRLAVLLKEEI 295
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFL-EKKFLPMLQLIATILNKFPSTVIAI---Q 114
+ V F S + + +++ +A + + V+ I
Sbjct: 296 ARHWVSVDESPRESRVIFHGDSMFSSGAAIVRPDRVDIIRRVAAEVRRVDGAVVIIGHTD 355
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
S G +N +S++RA+ + +Y + + + I+ +G PI +N + GR
Sbjct: 356 STPIRSGAFASNQALSEKRAEAVAAYFLAQ-GIAPEKITPKGAGDTQPIASNHDEKGRSQ 414
Query: 175 NQRIEIQIF 183
N+R+EI +
Sbjct: 415 NRRVEIFVT 423
>gi|118496956|ref|YP_898006.1| OmpA family protein [Francisella tularensis subsp. novicida U112]
gi|194324185|ref|ZP_03057959.1| OmpA family protein [Francisella tularensis subsp. novicida FTE]
gi|118422862|gb|ABK89252.1| OmpA family protein [Francisella novicida U112]
gi|194321632|gb|EDX19116.1| OmpA family protein [Francisella tularensis subsp. novicida FTE]
Length = 417
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 24/196 (12%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K +L L ++TT+S C + K +L+ E
Sbjct: 1 MKKLLKLCLMTSLLTTLSACQTLDDKDKD-----------SGPLTFPTLEPCTAELLQSN 49
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-- 116
Q V + G + L + +L + L +T I+ +
Sbjct: 50 QSFICVKEQTGPDLIET--NIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAG 107
Query: 117 -------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
TD N+ +S+ RA ++ YL+ +G+ S+ I+++ Y+ PI ND+
Sbjct: 108 KVESKILTDQKILTDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDST 167
Query: 170 VGRQNNQRIEIQIFPR 185
R NQR+EI + R
Sbjct: 168 SSRAINQRVEITLKSR 183
>gi|49478673|ref|YP_038563.1| flagellar motor protein MotB [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|196034432|ref|ZP_03101841.1| chemotaxis protein MotB [Bacillus cereus W]
gi|49330229|gb|AAT60875.1| motility protein B [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|195992974|gb|EDX56933.1| chemotaxis protein MotB [Bacillus cereus W]
Length = 262
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S E+ K + K + + + +
Sbjct: 83 LSA-SSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 141
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 142 TILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWEL 201
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I N+T+ G+ N+R+E+ I P
Sbjct: 202 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNNTQEGKAKNRRVEVFILP 256
>gi|218662996|ref|ZP_03518926.1| OmpA family peptidoglycan-associated lipoprotein precursor
[Rhizobium etli IE4771]
Length = 169
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 51/173 (29%), Gaps = 25/173 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++ ++ C +
Sbjct: 12 VMIALVAGLALASCAKKPPNSAGDLGLGAGAGGAATPGSAQDF----------------- 54
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + L A L ++P+ I ++ H D GT +
Sbjct: 55 TVNVGDRI-------FFDTDSSSIRADASQTLDRQAQWLGRYPNYQITVEGHADERGTRE 107
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + RA K YL RGV + R ++ + + P+ D N+R
Sbjct: 108 YNLALGARRAAAAKDYLASRGVPAQRMKTIS-YGKERPVAVCDDISCWSQNRR 159
>gi|260061280|ref|YP_003194360.1| OmpA family protein [Robiginitalea biformata HTCC2501]
gi|88785412|gb|EAR16581.1| OmpA family protein [Robiginitalea biformata HTCC2501]
Length = 832
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 7/167 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S + ++ + K+ ++ + ++ + E M+ IVV +
Sbjct: 666 SNTRYRILVEKATYSEQQEEVATRDNEQVDVELPMRKLQERIVVE--DGVRKLKTGPIYF 723
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ + L + ++ ++PS VIAI+SHTDS G+ N +S RA ++YL
Sbjct: 724 NFDKHNIRSDAAEELDKLVAVMQEYPSMVIAIESHTDSRGSSVYNRYLSDLRAKSTRAYL 783
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
I+ G+ +R S +G+ ++ D T Q N+R E +
Sbjct: 784 IENGIDPSRIQSAKGYGEDRLLNDCDGSVRCTSQQHQLNRRSEFIVV 830
>gi|331004883|ref|ZP_08328300.1| Outer membrane protein [gamma proteobacterium IMCC1989]
gi|330421337|gb|EGG95586.1| Outer membrane protein [gamma proteobacterium IMCC1989]
Length = 197
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L+ L AT + I++ H DS G N +S++RA+ +
Sbjct: 87 DANFATNSAELKDAGKAALNTFATRAKALNVSGISVVGHADSRGAESYNQALSEKRANTV 146
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ I G P+ +NDT GR N+R++I +
Sbjct: 147 -KSYLESQGIVGSLIRAEGQGETSPVASNDTAEGRAQNRRVDITV 190
>gi|167722035|ref|ZP_02405271.1| hypothetical protein BpseD_23689 [Burkholderia pseudomallei DM98]
Length = 433
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V + E + + P+L +A + + +
Sbjct: 300 LKNEIARGLLTVDEDDRRSVVVFRGDSMFRSGESRVLPEIEPVLDKVAREVARVGG-RVT 358
Query: 113 IQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ H+D+ + NNL++S++RA + L+QRG ++R I G P+ N T
Sbjct: 359 VTGHSDNQPIRRADIPNNLVLSEKRAAYVAQILVQRGTPADR-IRSEGRGDAQPVAENAT 417
Query: 169 KVGRQNNQRIEIQIF 183
GR N+R+EI +
Sbjct: 418 PAGRSRNRRVEIAVT 432
>gi|153838882|ref|ZP_01991549.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|149747673|gb|EDM58587.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
Length = 206
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 66/193 (34%), Gaps = 7/193 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L + ++ +A E + + + A D +
Sbjct: 4 MK--LLLALSVIAVTQQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAGS 61
Query: 62 GIVVSRIGDMITCYIPVHV---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ G+ I + V + F ++ ++ L +P+T I +Q +
Sbjct: 62 EVDNDGCGEYIKASEKMQVRVLFANDSDEINPVFRRQIRELSEFLKDYPTTSIELQGYAS 121
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G K+N +S+ RA ++ + + + GF + + +V N+R+
Sbjct: 122 KTGGSKHNQDLSERRAKNVRD-ALLGYGIEPNRVRIIGFGDTHLAEQGTDQVSHALNRRV 180
Query: 179 EIQIFP-RGNIKK 190
+ +G +KK
Sbjct: 181 TASVVGYKGKVKK 193
>gi|134302267|ref|YP_001122236.1| ompA family protein [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134050044|gb|ABO47115.1| ompA family protein [Francisella tularensis subsp. tularensis
WY96-3418]
Length = 417
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 24/196 (12%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K +L L ++TT+S C + K +L+ E
Sbjct: 1 MKKLLKLCLMTSLLTTLSACQTLDDKDKD-----------SGPLTFPTLEPCTAELLQSN 49
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-- 116
Q V + G + L + +L + L +T I+ +
Sbjct: 50 QSFICVKEQTGPDLIET--NIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAG 107
Query: 117 -------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
TD N+ +S+ RA ++ YL+ +G+ S+ I+++ Y+ PI ND+
Sbjct: 108 KVESKILTDQKILTDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDST 167
Query: 170 VGRQNNQRIEIQIFPR 185
R NQR+EI + R
Sbjct: 168 SSRAINQRVEITLKSR 183
>gi|90412653|ref|ZP_01220655.1| hypothetical protein P3TCK_08471 [Photobacterium profundum 3TCK]
gi|90326461|gb|EAS42873.1| hypothetical protein P3TCK_08471 [Photobacterium profundum 3TCK]
Length = 208
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 67/193 (34%), Gaps = 10/193 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ + + C S +K + + + + +S ++ + +
Sbjct: 11 FIILISCVFLFACTATSEQKSDIVTKKSQGNTENTTSSLNIYTSSNELNNSRNSAVVTDS 70
Query: 63 IVVSRIGD------MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
I + D + V L K +L IA L + + + H
Sbjct: 71 ITYTATPDASILLAQLPEQKDVIYFDNMNYELSVKNQQLLDPIALRLKLHLDSYLIVIGH 130
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+D G+ + NL++S ERA + Y+ I + I +++ RQ N+
Sbjct: 131 SDDAGSKEENLVLSFERAFSVAIYISSVFGIEEERIQIVALGDDELISNGNSEQERQLNR 190
Query: 177 RIEIQIFPRGNIK 189
R+E I P+ ++
Sbjct: 191 RVE-VISPKAIVR 202
>gi|115358599|ref|YP_775737.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115283887|gb|ABI89403.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 163
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 21/165 (12%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC A++ + + + ++ V L+
Sbjct: 18 GCHHAAKTPENAGMAPTPSSEAVATVTTDDLNNPNSPLAK-------------------- 57
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ +F +LQ A L PS + IQ +TD GT + NL + Q R+
Sbjct: 58 RSVYFDFDQYSVKPEFQSLLQSHADYLRNHPSRRVLIQGNTDERGTSEYNLALGQRRSQA 117
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ S ++ + + P+ + N+R ++
Sbjct: 118 VMS-ALETLGVQATQLEAVSLGKEKPVALGHDEDSWAQNRRADLV 161
>gi|242281268|ref|YP_002993397.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242124162|gb|ACS81858.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 242
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 53/136 (38%), Gaps = 1/136 (0%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
D + D + V + + + + F + L+++ +L + +L+
Sbjct: 98 DVLPPDMDRATLDENLKVLAKPEGVALVLTDKLMFPLGKSELDERAKILLYQLVPVLDYL 157
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
S + I +TD++G ++ + + N ++V +P+ +N
Sbjct: 158 GSADVNIAGYTDNVGGMRPSNFRLSGERAMAVLTYFVEQGIMNDRLTVSACGPTFPLYSN 217
Query: 167 DTKVGRQNNQRIEIQI 182
T GR N+R+EI I
Sbjct: 218 TTPEGRAQNRRVEILI 233
>gi|171315886|ref|ZP_02905116.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171098982|gb|EDT43770.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 220
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 60/220 (27%), Gaps = 41/220 (18%)
Query: 2 IKELGLSMFIMTT-ISGCGLASREK----------------------------------- 25
+K + L++ ++ C AS
Sbjct: 1 MKNIHLALLASVVSLAACSSASGPTYNAYELQPRDGIRTFRVDCHGILSSAKTCMKVATR 60
Query: 26 ---KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ T + S+ + + ++
Sbjct: 61 MCGNEAVRVVDATTPYRDGADPHSMVFQCGAAPAPVAAAAAPAPAALEKVSLT-GDAYFA 119
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L L + + + +TD+ G+ +N +S+ RAD + +YL
Sbjct: 120 TDSAVLTSAANAALDKLLNQQGDRHFARVEVDGYTDATGSDAHNQALSKRRADAVAAYLR 179
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + G P +NDT GR N+R+EI +
Sbjct: 180 E-HGLKADSFAATGHGEANPAASNDTVEGRARNRRVEISL 218
>gi|218462392|ref|ZP_03502483.1| OmpA family peptidoglycan-associated lipoprotein precursor
[Rhizobium etli Kim 5]
Length = 177
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 51/173 (29%), Gaps = 25/173 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++ ++ C +
Sbjct: 20 VMIALVAGLALASCAKKPPNSAGDLGLGAGAGGAATPGSAQDF----------------- 62
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + L A L ++P+ I ++ H D GT +
Sbjct: 63 TVNVGDRI-------FFDTDSSSIRADASQTLDRQAQWLGRYPNYQITVEGHADERGTRE 115
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + RA K YL RGV + R ++ + + P+ D N+R
Sbjct: 116 YNLALGARRAAAAKDYLASRGVPAQRMKTIS-YGKERPVAVCDDISCWSQNRR 167
>gi|187919624|ref|YP_001888655.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans
PsJN]
gi|187718062|gb|ACD19285.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 320
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 13/146 (8%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV------------SFVSEVFLEKKFLPM 95
+ + + + I + + L + +
Sbjct: 173 ESQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGRAI 232
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +A + K + +AI HTD+ G +N+ +SQ RAD +K YL+ + + +S
Sbjct: 233 LDQMAAAMVKMTTKTVAIIGHTDNSGNRTSNIALSQARADAVKGYLVAK-GIPPQQLSTT 291
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G PI +NDT GR N+RIE +
Sbjct: 292 GVGPDQPIASNDTTDGRARNRRIEFR 317
>gi|238783322|ref|ZP_04627346.1| hypothetical protein yberc0001_32980 [Yersinia bercovieri ATCC
43970]
gi|238715745|gb|EEQ07733.1| hypothetical protein yberc0001_32980 [Yersinia bercovieri ATCC
43970]
Length = 403
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 56/145 (38%), Gaps = 6/145 (4%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPS 108
+ Q ++ +VV + F S + + + ++ I LN
Sbjct: 253 LANFLQEEIASGMVVVRTDDKQSVIALRGDGLFDSGMITIRPAYNQVINHIGNALNGVSG 312
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYL---IQRGVSSNRFISVRGFAYKYPIDT 165
I + ++D++ K+ + + + + +Q+ + S + + G P+
Sbjct: 313 -KIMVTGYSDNVPIRKSTFTSNSALSLARANAVGSQLQKYLDSAQRVKTEGRGEANPVAP 371
Query: 166 NDTKVGRQNNQRIEIQIF-PRGNIK 189
ND+K R N+R+EI + P N K
Sbjct: 372 NDSKKDRALNRRVEITLLVPPENTK 396
>gi|229141242|ref|ZP_04269781.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26]
gi|229198660|ref|ZP_04325361.1| OmpA/MotB domain protein [Bacillus cereus m1293]
gi|228584819|gb|EEK42936.1| OmpA/MotB domain protein [Bacillus cereus m1293]
gi|228642283|gb|EEK98575.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26]
Length = 233
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 64/175 (36%), Gaps = 7/175 (4%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L S + KK ++ + + + + +
Sbjct: 55 LSASSLESEKIKKNA--EAEVKQQEMNELKAVQKGIDKYIEENRLSSSFKTDLTEKGLKV 112
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++ +L I + HTD++ +N +
Sbjct: 113 TILENVLFDSGKADVKLESLSIAKEMSNLLVSASPREITVSGHTDNVPIANAQFASNWEL 172
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 173 STQRAVNFMQVLLQNKELQPGKFSAVGYGEYRSIAPNDTQEGKAKNRRVEVFILP 227
>gi|162146629|ref|YP_001601088.1| outer membrane lipoprotein omp16 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209543379|ref|YP_002275608.1| peptidoglycan-associated lipoprotein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161785204|emb|CAP54750.1| Outer membrane lipoprotein omp16 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531056|gb|ACI50993.1| peptidoglycan-associated lipoprotein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 158
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 25/176 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M +L ++ + ++ C G + A Q
Sbjct: 1 MRLKLLGALGMAVLLAACS------------------------GENEKGATTGTGAAAQS 36
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
TG+ D++ +++ L L A L K+P I + + D
Sbjct: 37 TGVTPGSEADLVANVGDRVFFELNKNNLSSDAQATLDRQAAWLAKYPQVTIQVAGNCDDR 96
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
GT + N+ + + RA+ + YL+ +GV+++R I+ + P T D + N+
Sbjct: 97 GTEEYNIALGERRANAARDYLVAKGVAASR-ITTISYGKDRPTATGDDEQSWAQNR 151
>gi|323225691|gb|EGA09915.1| hypothetical protein SEEM0055_14308 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
Length = 324
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 65/186 (34%), Gaps = 10/186 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
G+++ M T+ G + + V + + + + + ++
Sbjct: 140 GIALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPPVPVHKLRLKILLANEIARGL 199
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V F + + P++ A + + + + HTDS
Sbjct: 200 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA-VTVTGHTDSQP 258
Query: 122 TLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
S++RA + + L GV + R + + G P+ ND+K GR N+R
Sbjct: 259 IHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGR-VHIVGKGDTVPVADNDSKAGRAKNRR 317
Query: 178 IEIQIF 183
+EI +
Sbjct: 318 VEILVV 323
>gi|94986930|ref|YP_594863.1| flagellar motor protein [Lawsonia intracellularis PHE/MN1-00]
gi|94731179|emb|CAJ54541.1| Flagellar motor protein [Lawsonia intracellularis PHE/MN1-00]
Length = 206
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 7/148 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLI 99
++ D I + +IT +P V F L + L +
Sbjct: 51 AAQKNTFDAIRSFITEHALGDNIKATFDNGIITLRLPDEVLFAPGSEQLTPQGEKALSQL 110
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISV 154
+ K I I+ +TD+ + NN +S RA + L+ +G ++
Sbjct: 111 RDLFLKNREQSINIKGYTDNSSVSEGARFHNNWELSALRAVNVLRKLL-QGGIEATRMTA 169
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ NDT R N+R+E +
Sbjct: 170 TGLGDLDPLAPNDTPENRAQNRRVEFTL 197
>gi|21111774|gb|AAM40073.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575109|gb|AAY50519.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 431
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 73 TCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + F + + +L +A L K + ++ HTD+ G N +S+
Sbjct: 316 VITLSDRILFDFDKADIRPDAARVLDTLAAALGKVSVAQMEVRGHTDAKGGDDYNQALSE 375
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQI 182
RA+ + + L RG + + S +G+ P+ N D GRQ N+R+E+ +
Sbjct: 376 RRANAVLAALRTRGTAQS--ASAKGYGESQPLAPNTVKGQDNPGGRQLNRRVELFL 429
>gi|308271860|emb|CBX28468.1| hypothetical protein N47_G37920 [uncultured Desulfobacterium sp.]
Length = 191
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 64/191 (33%), Gaps = 18/191 (9%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIV-----------------NKRFGSSLDKAE 51
M + + CG + + + + + SL A+
Sbjct: 1 MPGLLFFASCGKQTVKADVGEVKDTLSDQDSLSSGTGTGSGSASDSSASDIASESLTDAD 60
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ + + M L + +L+ A L K+ + ++
Sbjct: 61 SLKAGPSAQEKMAMEKSEAMQKLVNEDVHFDYDSAVLSQSAQEILKKKAAYLEKYSAILV 120
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I+ H D GT + NL + ++RA +++LI S+ I + + P+D + +V
Sbjct: 121 TIEGHCDDRGTNEYNLALGEKRAQSARNFLI-NLGISSSRIKTISYGEEKPLDPANNEVA 179
Query: 172 RQNNQRIEIQI 182
N+R +
Sbjct: 180 WAKNRRAHFIL 190
>gi|53721140|ref|YP_110125.1| hypothetical protein BPSS0102 [Burkholderia pseudomallei K96243]
gi|167818184|ref|ZP_02449864.1| hypothetical protein Bpse9_23811 [Burkholderia pseudomallei 91]
gi|167896649|ref|ZP_02484051.1| hypothetical protein Bpse7_23090 [Burkholderia pseudomallei 7894]
gi|167921273|ref|ZP_02508364.1| hypothetical protein BpseBC_22178 [Burkholderia pseudomallei
BCC215]
gi|52211554|emb|CAH37548.1| OmpA family membrane protein [Burkholderia pseudomallei K96243]
Length = 433
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V F E + + P+L +A + + +
Sbjct: 300 LKNEIARGLLTVDEDDRRSVVVFRGDAMFRSGESRVLPEIEPVLDKVAREVARVGG-RVT 358
Query: 113 IQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ H+D+ + NNL++S++RA + L+QRG ++R I G P+ N T
Sbjct: 359 VTGHSDNQPIRRADIPNNLVLSEKRAAYVAQILVQRGTPADR-IRSEGRGDAQPVAENAT 417
Query: 169 KVGRQNNQRIEIQIF 183
GR N+R+EI +
Sbjct: 418 PAGRSRNRRVEIAVT 432
>gi|56707940|ref|YP_169836.1| OmpA family protein [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110670411|ref|YP_666968.1| OmpA family protein [Francisella tularensis subsp. tularensis
FSC198]
gi|224457021|ref|ZP_03665494.1| OmpA family protein [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254370429|ref|ZP_04986434.1| OmpA family protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254874744|ref|ZP_05247454.1| ompA family protein [Francisella tularensis subsp. tularensis
MA00-2987]
gi|54114377|gb|AAV29822.1| NT02FT0718 [synthetic construct]
gi|56604432|emb|CAG45464.1| OmpA family protein [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110320744|emb|CAL08847.1| OmpA family protein [Francisella tularensis subsp. tularensis
FSC198]
gi|151568672|gb|EDN34326.1| OmpA family protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254840743|gb|EET19179.1| ompA family protein [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159125|gb|ADA78516.1| OmpA family protein [Francisella tularensis subsp. tularensis
NE061598]
Length = 417
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 24/196 (12%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K +L L ++TT+S C + K +L+ E
Sbjct: 1 MKKLLKLCLMTSLITTLSACQTLDDKDKD-----------SGPLTFPTLEPCTAELLQSN 49
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-- 116
Q V + G + L + +L + L +T I+ +
Sbjct: 50 QSFICVKEQTGPDLIET--NIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAG 107
Query: 117 -------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
TD N+ +S+ RA ++ YL+ +G+ S+ I+++ Y+ PI ND+
Sbjct: 108 KVESKILTDQKILTDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDST 167
Query: 170 VGRQNNQRIEIQIFPR 185
R NQR+EI + R
Sbjct: 168 SSRAINQRVEITLKSR 183
>gi|86148066|ref|ZP_01066367.1| putative outer membrane protein [Vibrio sp. MED222]
gi|85834126|gb|EAQ52283.1| putative outer membrane protein [Vibrio sp. MED222]
Length = 203
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 67/191 (35%), Gaps = 14/191 (7%)
Query: 1 MIKELGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K L + ++T + C +++ ++ + + + D + +
Sbjct: 1 MMKITYLLLPVLTMTLFACS----NQQREAYIETPEAEQIADLQDDDKDGVVNA-RDTCP 55
Query: 60 DTGIV--VSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
T V G T + + F + +A L + S I
Sbjct: 56 STPETSQVDNDGCGETIRAEEVRQLKILFAHDSFEVNPIFSSQISTMAEFLENYKSASIE 115
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
IQ + +G+ + NL +S++RA+ ++ L+ + + G+ + + D
Sbjct: 116 IQGYASKVGSNEYNLDLSKKRANNVQDELLSN-GIEPERVRIVGYGEERLENDGDDPTSH 174
Query: 173 QNNQRIEIQIF 183
N+++ +
Sbjct: 175 ALNRKVTATVV 185
>gi|304312414|ref|YP_003812012.1| Predicted OmpA family protein [gamma proteobacterium HdN1]
gi|301798147|emb|CBL46369.1| Predicted OmpA family protein [gamma proteobacterium HdN1]
Length = 244
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 11/155 (7%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ E+ ++ L D D I V F + L+ + L +L+ +
Sbjct: 55 QAEEQQRVALEEALEIALADPLASGRITLDRGRIGISGSVLFALNSAELQPEGLALLREV 114
Query: 100 ATILNKFPSTV---IAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNR 150
+ L K+ + + TD + K +N +S ERA + LI +
Sbjct: 115 SAPLRKYLEQRQELLMVSGFTDDLPIQKGNHSFTDNWALSAERALTVTRALIDN-GLPST 173
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + PI +N GR N+R+EI P+
Sbjct: 174 LVFAAAFGAEQPIASNSDAEGRAKNRRVEIAPVPK 208
>gi|78189866|ref|YP_380204.1| OmpA domain-containing protein [Chlorobium chlorochromatii CaD3]
gi|78172065|gb|ABB29161.1| OmpA domain protein [Chlorobium chlorochromatii CaD3]
Length = 205
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L++ LQ A +L +F I I+ H D GT + NL + + RA
Sbjct: 97 LGDIFFEYDSATLDESAQMQLQQNAALLQQFIVESIQIEGHCDIRGTSEYNLALGERRAT 156
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
K YL++ GV ++R +V F + P D +++ N+R+ + +
Sbjct: 157 TAKEYLMRLGVPASRLETVS-FGEERPFDNGNSEDAWAKNRRVHFVLIKQ 205
>gi|78047517|ref|YP_363692.1| flagellar motor protein MotD [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035947|emb|CAJ23638.1| flagellar motor protein MotB [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 324
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 60/170 (35%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+A++ + V L ++ + + + I + R I I
Sbjct: 105 SMAAQMRMPVSLRNQAQLARAQRQMDAVEQQLSKTLAPLIDKQLITIRRNDLWIEVEINS 164
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L L +A++L P+ + ++ +TD+ +N +S R
Sbjct: 165 DILFGTGSATLAGGARGTLSTLASVLRDAPNG-VRVEGYTDNQPIATAQFPSNWELSAAR 223
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + +++ G+ N T+ GR N+R+ + I
Sbjct: 224 AASVVHLFAD-DGIAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIIL 272
>gi|298529615|ref|ZP_07017018.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298511051|gb|EFI34954.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 251
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 60/165 (36%), Gaps = 5/165 (3%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ V + ++ + + + + + + IT +P V F
Sbjct: 81 TDTSGVLMDRATQFRQLQEAQQETFADIQYYQNEHGIEGIVGARLDEGKITLTLPSEVLF 140
Query: 83 V-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS-- 139
EV L + +LQ + I N+ I I+ HTD+I + +++
Sbjct: 141 DLGEVELRPEGEELLQDMRDIFNRHSEQRINIEGHTDNIPPREGGRFEDNWEISSLRALN 200
Query: 140 --YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+++ ++ G+A P+ N T+ R N+R+E +
Sbjct: 201 TLRFLKQEGIDPGRMTATGYADLQPLYPNTTEGNRARNRRVEFVL 245
>gi|206562638|ref|YP_002233401.1| OmpA family protein [Burkholderia cenocepacia J2315]
gi|198038678|emb|CAR54638.1| OmpA family protein [Burkholderia cenocepacia J2315]
Length = 223
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 65/187 (34%), Gaps = 10/187 (5%)
Query: 5 LGLSMFIMTTISGCGL-ASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--EFQMQLQDT 61
+ +F+ + + + + L + + D A L+
Sbjct: 36 TLMVLFLALYVLQLAKYNALDARYQTLARQAGGAATAVVDTAKSDPAPPWLALLDSLKSN 95
Query: 62 G-IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G I + + + I + F + L P+L IA L+ + I ++ HTDS
Sbjct: 96 GRIALVKAPHGVEIGIDAKILFNVGDARLLPDSSPVLNQIAQALSAHATGDILVEGHTDS 155
Query: 120 IGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ ++N +S RA + + + ++ G A P+ D R N
Sbjct: 156 VPIANAKYESNWELSSARAGSVVR-YLTERGVAPHRLAAIGRADTQPLVAGDDAASRARN 214
Query: 176 QRIEIQI 182
+R+ I +
Sbjct: 215 RRVTIFV 221
>gi|172065209|ref|YP_001815921.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171997451|gb|ACB68368.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 220
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 60/219 (27%), Gaps = 39/219 (17%)
Query: 2 IKELGLSMFIMTT-ISGCGLASREKKKVFLHKSNDT----DIVNKRFGSSLDKAEDEFQM 56
+K + L++ ++ C AS + +S D + SS
Sbjct: 1 MKNIQLALLASVVSLAACSSASGPTYNAYELQSRDGIRTFRVDCHGILSSAKTCMKVATR 60
Query: 57 QLQDTGIVVSRIGDMITCYIP---------------------------------VHVSFV 83
+ + V
Sbjct: 61 MCANDAVRVVDTTTPYRDGADPHSMVFQCGAAPAPVPAAAAPAPAAVEKVSLTGDAYFAT 120
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L L + + + +TD+ G+ +N +S+ RAD + +YL
Sbjct: 121 DSAVLTSAATAALDKLLNQQGDRHFARVEVDGYTDATGSDAHNQALSKRRADAVAAYLRG 180
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G P +NDT GR N+R+EI +
Sbjct: 181 -HGLKADAFAATGHGEANPAASNDTVEGRARNRRVEISL 218
>gi|126444974|ref|YP_001061168.1| hypothetical protein BURPS668_A0162 [Burkholderia pseudomallei 668]
gi|126224465|gb|ABN87970.1| SciP protein [Burkholderia pseudomallei 668]
Length = 433
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V F E + + P+L +A + + +
Sbjct: 300 LKNEIARGLLTVDEDDRRSVVVFRGDAMFRSGESRVLPEIEPVLDKVAREVARVGG-RVT 358
Query: 113 IQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ H+D+ + NNL++S++RA + L+QRG ++R I G P+ N T
Sbjct: 359 VTGHSDNQPIRRADIPNNLVLSEKRAAYVAQILVQRGTPADR-IRSEGRGDAQPVAENAT 417
Query: 169 KVGRQNNQRIEIQIF 183
GR N+R+EI +
Sbjct: 418 PAGRSRNRRVEIAVT 432
>gi|228917149|ref|ZP_04080707.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228929558|ref|ZP_04092577.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935820|ref|ZP_04098632.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228948234|ref|ZP_04110518.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229093607|ref|ZP_04224708.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42]
gi|229124075|ref|ZP_04253267.1| OmpA/MotB domain protein [Bacillus cereus 95/8201]
gi|228659377|gb|EEL15025.1| OmpA/MotB domain protein [Bacillus cereus 95/8201]
gi|228689816|gb|EEL43622.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42]
gi|228811592|gb|EEM57929.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228823877|gb|EEM69697.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830137|gb|EEM75755.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842567|gb|EEM87657.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 234
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S E+ K + K + + + +
Sbjct: 55 LSA-SSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 113
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 114 TILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWEL 173
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 174 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 228
>gi|212704937|ref|ZP_03313065.1| hypothetical protein DESPIG_03004 [Desulfovibrio piger ATCC 29098]
gi|212671601|gb|EEB32084.1| hypothetical protein DESPIG_03004 [Desulfovibrio piger ATCC 29098]
Length = 155
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 64/185 (34%), Gaps = 35/185 (18%)
Query: 2 IKELGLSMFIMTTIS---GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K L + ++ ++ GC +++ D E + +
Sbjct: 1 MKRYALILALVMALAAGFGCAKKTQDATGDV------------------DDMSPEMRAAI 42
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q + + ++ ++ ML A ++ K+PS + I+ + D
Sbjct: 43 QQ-------------ITDGRVLFAFDKFDIQPQYKDMLTAKAELMKKYPSIRVRIEGNCD 89
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + NL + + RA Y++ R + + + + + P+ + N+R
Sbjct: 90 ERGTQEYNLALGERRARAAYDYMV-RLGVNPGQLEMISYGKEKPVVQGSGESVWAQNRRD 148
Query: 179 EIQIF 183
+ +
Sbjct: 149 DFCVI 153
>gi|237508587|ref|ZP_04521302.1| type IV/VI secretion system protein, DotU family [Burkholderia
pseudomallei MSHR346]
gi|235000792|gb|EEP50216.1| type IV/VI secretion system protein, DotU family [Burkholderia
pseudomallei MSHR346]
Length = 439
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V + E + + P+L +A + + +
Sbjct: 306 LKNEIARGLLTVDEDDRRSVVVFRGDSMFRSGESRVLPEIEPVLDKVAREVARVGG-RVT 364
Query: 113 IQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ H+D+ + NNL++S++RA + L+QRG ++R I G P+ N T
Sbjct: 365 VTGHSDNQPIRRADIPNNLVLSEKRAAYVAQILVQRGTPADR-IRSEGRGDAQPVAENAT 423
Query: 169 KVGRQNNQRIEIQIF 183
GR N+R+EI +
Sbjct: 424 PAGRSRNRRVEIAVT 438
>gi|262375579|ref|ZP_06068812.1| peptidoglycan-associated lipoprotein [Acinetobacter lwoffii SH145]
gi|262309833|gb|EEY90963.1| peptidoglycan-associated lipoprotein [Acinetobacter lwoffii SH145]
Length = 190
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 3/168 (1%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
++GC R+ DT L + + +
Sbjct: 16 VVMTGCAS--RKPAAEVQTGGLDTTGTTTVNTQGLSEDAALNAQNMAGASAKGVTAENKA 73
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
V L + L LQ A L ++ +A+ HTD GT + N+ + +
Sbjct: 74 FLAKRVVHFDYDSTELSNEDLNTLQAHAQFLMANANSRVALTGHTDERGTREYNMALGER 133
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
RA ++S+L+ + + + + PI+ + + N+R+EI
Sbjct: 134 RAKAVESFLVT-TGVNPGQLEAVSYGKEMPINAGHDENAWKENRRVEI 180
>gi|284038460|ref|YP_003388390.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283817753|gb|ADB39591.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 798
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 69/189 (36%), Gaps = 10/189 (5%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-SSLDKAEDEFQMQLQDTG 62
+L ++ + ++ C + T + ++ + G
Sbjct: 608 KLPIAGVNVVLVNSCDSTKQRTTTGPDGSYVFTVQAGCDYSIEAMKDNMGTLGGHISKDG 667
Query: 63 I---VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
++ I +++ + L + +L K+P+ I ++SHTDS
Sbjct: 668 TGTTDIAMFKKGDIITIDNIYYDLNKATIRPDAAVELDKVVELLTKYPAMTIEMRSHTDS 727
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQN 174
T N +S RA + +YL +G++ R I +G+ ++ ++ Q
Sbjct: 728 RATAVYNKTLSGNRAKSVVAYLKSKGIAMERMI-AKGYGESQLLNKCKDGVECSEEDHQK 786
Query: 175 NQRIEIQIF 183
N+R EI+I
Sbjct: 787 NRRTEIKIL 795
>gi|218778894|ref|YP_002430212.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218760278|gb|ACL02744.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 215
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 60/192 (31%), Gaps = 27/192 (14%)
Query: 17 GCGL-ASREKKKVFLHKSNDTD---IVNKRFGSSLDKAEDEFQMQLQ-DTGIVVSRI--- 68
C ++ +K T G +D+ E + + T + V +
Sbjct: 20 ACASNKDKQAQKHVAPPPAVTAEKSQGQNGIGEIIDEYEGKVVAKSARATLVRVDKDLDH 79
Query: 69 -------------------GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ IPV ++ + L L ++++L+ +
Sbjct: 80 DGVVGKADKCPGTPKGAPVDENGCWSIPVIQFDLNSMELNPAARSALDAVSSVLHVNKAV 139
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
++I+ H S G + + +SV G+ P+ N+++
Sbjct: 140 KLSIEGHACSAGDNAAYNNYLSLQRAQAVKDYLISRGVDGARMSVTGYGANQPVKDNNSR 199
Query: 170 VGRQNNQRIEIQ 181
R N+R+EI
Sbjct: 200 AHRIQNRRVEIV 211
>gi|217423043|ref|ZP_03454545.1| OmpA family protein [Burkholderia pseudomallei 576]
gi|254182960|ref|ZP_04889553.1| OmpA family protein [Burkholderia pseudomallei 1655]
gi|254264206|ref|ZP_04955071.1| SciP protein [Burkholderia pseudomallei 1710a]
gi|254299754|ref|ZP_04967203.1| SciP protein [Burkholderia pseudomallei 406e]
gi|157809358|gb|EDO86528.1| SciP protein [Burkholderia pseudomallei 406e]
gi|184213494|gb|EDU10537.1| OmpA family protein [Burkholderia pseudomallei 1655]
gi|217393951|gb|EEC33971.1| OmpA family protein [Burkholderia pseudomallei 576]
gi|254215208|gb|EET04593.1| SciP protein [Burkholderia pseudomallei 1710a]
Length = 439
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V + E + + P+L +A + + +
Sbjct: 306 LKNEIARGLLTVDEDDRRSVVVFRGDSMFRSGESRVLPEIEPVLDKVAREVARVGG-RVT 364
Query: 113 IQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ H+D+ + NNL++S++RA + L+QRG ++R I G P+ N T
Sbjct: 365 VTGHSDNQPIRRADIPNNLVLSEKRAAYVAQILVQRGTPADR-IRSEGRGDAQPVAENAT 423
Query: 169 KVGRQNNQRIEIQIF 183
GR N+R+EI +
Sbjct: 424 PAGRSRNRRVEIAVT 438
>gi|293194233|ref|ZP_06609955.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus
F0309]
gi|292819752|gb|EFF78765.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus
F0309]
Length = 348
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 9/129 (6%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
++ V G +IT + E + L +AT+LN I HTDS
Sbjct: 220 ESLKPVESCGTVITLE-DSILFDFGESDIRPDAAHTLSKLATVLNDAKVPAAHIYGHTDS 278
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQ 173
+ N +S++RA+ + + L + ++ + G+ P+ N D GR
Sbjct: 279 VSDEAFNQKLSEDRANAVSAEL--KKDGASAILDATGYGESKPVAPNENADGSDNPAGRA 336
Query: 174 NNQRIEIQI 182
N+R+EI I
Sbjct: 337 LNRRVEIFI 345
>gi|23099679|ref|NP_693145.1| flagellar motor protein MotS [Oceanobacillus iheyensis HTE831]
gi|22777909|dbj|BAC14180.1| flagellar motor aparatus [Oceanobacillus iheyensis HTE831]
Length = 251
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 64/176 (36%), Gaps = 13/176 (7%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAED-------EFQMQLQDTGIVVSRIGDMI 72
+ + + + N+ S D+ ++ + I +R +
Sbjct: 74 STGENSEDGKIDEIEPIYLANEEEEKSTDELDELMMNVSQYLEENNLKDVITANRNERGV 133
Query: 73 TCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNL 127
+ + F E + ++ P L I T+L++ + ++ HTDS +N
Sbjct: 134 VLVLQEKILFESGEAEILEEAGPFLNHIGTLLSEL-DNQVNVEGHTDSRPISNYRYPSNW 192
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S RA + Y I+ S G+A P++ N + N+R+EI I
Sbjct: 193 ELSGARASSVVRYFIEAESLHMSRFSTVGYADTVPLEPNSNEANMSKNRRVEIIIL 248
>gi|188991572|ref|YP_001903582.1| flagellar motor protein MotD [Xanthomonas campestris pv. campestris
str. B100]
gi|167733332|emb|CAP51531.1| motB1 [Xanthomonas campestris pv. campestris]
Length = 324
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 59/170 (34%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+A++ + V L ++ + + + I + R I I
Sbjct: 105 SMAAQMRMPVSLRNQAQLARAQRQMDAVAQQLNKTLSPLIDKQLITIRRRDLWIEVEINS 164
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L L +A +L P+ + ++ +TD+ +N +S R
Sbjct: 165 DILFVTGSALLAGSARGTLSTLAAVLRDAPNG-VRVEGYTDNQPIATAQFPSNWELSAAR 223
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + +++ G+ N T+ GR N+R+ + I
Sbjct: 224 AASVVHLFADE-GVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIIL 272
>gi|126725522|ref|ZP_01741364.1| OmpA/MotB [Rhodobacterales bacterium HTCC2150]
gi|126704726|gb|EBA03817.1| OmpA/MotB [Rhodobacterales bacterium HTCC2150]
Length = 170
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 68/183 (37%), Gaps = 21/183 (11%)
Query: 2 IKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K + + + T++ C + D V GS+ D + MQ
Sbjct: 1 MKNYTKLILVALSLTLAACSNSPLSGGFGGNQNGLDGPGVGD--GSADDPTSVAYFMQTI 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + V + L +L A LN P+ ++ ++ H D
Sbjct: 59 GDRV----------------LFDVDQSTLNDAGRTLLSQQAAWLNSNPAYMVLVEGHADE 102
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT NL + RA ++YL+ +GV ++R +V F + P++ + N+R
Sbjct: 103 QGTRAYNLALGDRRATAARAYLVSQGVDASRLSTVT-FGKERPLEICSQEACYSQNRRAV 161
Query: 180 IQI 182
I +
Sbjct: 162 IIL 164
>gi|123442902|ref|YP_001006877.1| putative OmpA family protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089863|emb|CAL12719.1| putative OmpA family protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 458
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 66/186 (35%), Gaps = 13/186 (6%)
Query: 8 SMFIMTTISGCGLASR------EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ I+ + S+ E + + ++ + + ++
Sbjct: 273 MLLCGFLIAATFIGSKYFLSVPESDLLKRMAALQRPVIVPTVAVQKLRLAILLKDEIAKQ 332
Query: 62 GIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V F + + + +++ +A +++ + I HTDS+
Sbjct: 333 LVSVDETSSRSKVIFKGDTMFQVGSDKVRSEIMSVIERVAQEVHRVQGA-VLIIGHTDSM 391
Query: 121 GTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
K N ++S++RA + ++ ++ I G P+ +ND GR N+
Sbjct: 392 PINKPGFPNNQVLSEKRAANVARFM-EKAGIPTDKIQFEGKGDTQPVSSNDDAAGRSQNR 450
Query: 177 RIEIQI 182
R+EI +
Sbjct: 451 RVEIFV 456
>gi|157164304|ref|YP_001466351.1| Omp18 [Campylobacter concisus 13826]
gi|112800114|gb|EAT97458.1| Omp18 [Campylobacter concisus 13826]
Length = 168
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 75/187 (40%), Gaps = 23/187 (12%)
Query: 2 IKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K++ L+ +SGC + E V ++ +++ N S D+
Sbjct: 1 MKKVVLASVAVATLLLSGCSSKNPE---VDMNANSNQSADNSGSMSDADRLAALIA---- 53
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHT 117
I + + ++ ++ A++ N+ + I ++ +
Sbjct: 54 -----------NIESQVKSVYFDFDKFNIKADQQGVVSSNASVFNQADAQALSIKVEGNC 102
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + N + +RA K L++ GVS++R I+V F P+ T+ TK N+R
Sbjct: 103 DEWGTDEYNYALGLKRAKSAKDALVRNGVSADR-IAVVSFGESNPVCTDKTKACDAQNRR 161
Query: 178 IEIQIFP 184
+ ++ P
Sbjct: 162 ADFKVLP 168
>gi|99082304|ref|YP_614458.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99038584|gb|ABF65196.1| OmpA/MotB [Ruegeria sp. TM1040]
Length = 352
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 65/166 (39%), Gaps = 1/166 (0%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-DTGIVVSRIGDMITCYIP 77
++ + S N G D + TG + + +
Sbjct: 185 STQPVDRDTIQADASAQGAASNTENGLEQALLVDAIKKGGSLSTGALRDVLQLQGHVPLL 244
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + L+ +AT ++ S VI + HTD++G L+ N+ +S+ RA +
Sbjct: 245 DLEFDTASAQVGEGPYDSLKHLATFMSDHESAVILLVGHTDTVGGLQGNIALSERRAASV 304
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ LI R I V G Y P+ N ++ GR+ N+R+E +
Sbjct: 305 RERLITRYGVDGARIQVAGAGYMAPLAPNTSEEGREINRRVEAVLV 350
>gi|325526573|gb|EGD04123.1| OmpA/MotB domain-containing protein [Burkholderia sp. TJI49]
Length = 112
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ + L + ++ + +TDSIG+ N +S RA +
Sbjct: 6 DALFDFDKANLKPAGVRALDEVIDNARGKRFRLVEVAGYTDSIGSDSYNNALSLRRAKSV 65
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YL G+ + R +V GF P+ ++ T GR N+R+EI +
Sbjct: 66 ADYLRAHGLDAERM-AVDGFGKSNPVASDATDAGRAQNRRVEIVL 109
>gi|27462205|gb|AAO15380.1|AF330622_1 outer membrane protein [Helicobacter bizzozeronii]
Length = 172
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
VS + V F + +E +L+ A L ++P + ++ H D GT
Sbjct: 49 VSGSTQDFMVNVGDRVFFSLNSSSIEPDAEHVLKRQAEWLLRYPHYFVTVEGHADDRGTR 108
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ NL + Q R+ ++ YL+ S++ + + + P+ D N+R+ + I
Sbjct: 109 EYNLALGQRRSVAVRDYLVSL-GVSSQRMRTISYGKERPVAVCDDNSCWNQNRRVVLTI 166
>gi|170703595|ref|ZP_02894341.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
IOP40-10]
gi|172063336|ref|YP_001810987.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
MC40-6]
gi|170131500|gb|EDT00082.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
IOP40-10]
gi|171995853|gb|ACB66771.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
MC40-6]
Length = 163
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 21/165 (12%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC A++ + + + ++ V L+
Sbjct: 18 GCHHAAKTPENAGMAPTPSSEAVATVTTDDLNNPNSPLAK-------------------- 57
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ ++ +LQ A L PS + IQ +TD GT + NL + Q R+
Sbjct: 58 RSVYFDFDQYSVKPEYQSLLQSHADYLRNHPSRRVLIQGNTDERGTSEYNLALGQRRSQA 117
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ S ++ + + P+ + N+R ++
Sbjct: 118 VMS-ALETLGVQATQLEAVSLGKEKPVALGHDEDSWAQNRRADLV 161
>gi|107025698|ref|YP_623209.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116693120|ref|YP_838653.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105895072|gb|ABF78236.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116651120|gb|ABK11760.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
Length = 170
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 24/178 (13%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
++ + + GC L ++ T + + F + G
Sbjct: 17 ALLLCMLLVGCQTPP--PLHRGLTQTQVTALKSAGFQET-------------GQGFEFGS 61
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G + L+ +++ I L + + ++D GT +
Sbjct: 62 TGP--------ILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDEGTAAYDA 113
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S+ RA+V+ L+ + I++ G P+ N T GR N+R I + PR
Sbjct: 114 ELSRRRAEVVAVELVD-VGLDAKRIAIVGKGKLDPVGDNRTPAGRAQNRRAAIVVSPR 170
>gi|229186744|ref|ZP_04313902.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1]
gi|228596757|gb|EEK54419.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1]
Length = 234
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S E+ K + K + + + +
Sbjct: 55 LSA-SSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 113
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 114 TILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWEL 173
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 174 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 228
>gi|66046660|ref|YP_236501.1| flagellar motor protein MotD [Pseudomonas syringae pv. syringae
B728a]
gi|63257367|gb|AAY38463.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|330972462|gb|EGH72528.1| flagellar motor protein MotD [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 295
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 61/170 (35%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K + + + D F ++ + V I + + F
Sbjct: 84 KDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSMLFGSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K +++ +A I+ +F I ++ TD N +S R+ I
Sbjct: 144 DAMPSDKAFTIIEKVAGIVKRF-DNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVRM 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV+ R SV G+ PI N + GR N+R+ + I +I++
Sbjct: 203 LAMDGVNPARLASV-GYGEFQPIVPNTSTAGRAKNRRVVLVISRNLDIRR 251
>gi|21231338|ref|NP_637255.1| flagellar motor protein MotD [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768610|ref|YP_243372.1| flagellar motor protein MotD [Xanthomonas campestris pv. campestris
str. 8004]
gi|21112997|gb|AAM41179.1| MotB protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66573942|gb|AAY49352.1| MotB protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 324
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 59/170 (34%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+A++ + V L ++ + + + I + R I I
Sbjct: 105 SMAAQMRMPVSLRNQAQLARAQRQMDAVAQQLNKTLSPLIDKQLITIRRRDLWIEVEINS 164
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L L +A +L P+ + ++ +TD+ +N +S R
Sbjct: 165 DILFVTGSALLAGSARGTLSTLAAVLRDAPNG-VRVEGYTDNQPIATAQFPSNWELSAAR 223
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + +++ G+ N T+ GR N+R+ + I
Sbjct: 224 AASVVHLFADE-GVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIIL 272
>gi|167589725|ref|ZP_02382113.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu]
Length = 241
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 52/138 (37%), Gaps = 7/138 (5%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST- 109
+ Q + V L L LN
Sbjct: 108 QPAVQPSVPAAESRSESAPQRHILLQGNANFDVDSAKLTLDARRQLDQ---FLNTNKGVG 164
Query: 110 --VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I +TDS G+L +N +S+ RA + +YL G+ + +F+S G P+ +N
Sbjct: 165 FQRVTITGYTDSTGSLAHNRRLSESRARSVATYLRTGGLQAAQFVS-EGMGPSDPVASNA 223
Query: 168 TKVGRQNNQRIEIQIFPR 185
T GR N+R+EIQ+ P
Sbjct: 224 TADGRAQNRRVEIQVVPE 241
>gi|148977050|ref|ZP_01813696.1| protein F-related protein [Vibrionales bacterium SWAT-3]
gi|145963710|gb|EDK28971.1| protein F-related protein [Vibrionales bacterium SWAT-3]
Length = 210
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 51 EDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPS 108
D ++ L+ I + G+ + + HV+F F E + L + + L++
Sbjct: 74 NDPLEVFLRQNRIDFEVLPGNHVMVKLEQHVNFKTGSAFPEPAYNQWLDTLGSYLSQRQD 133
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I I+ HTD+ GT + N +S++RA +K+ L S+R I RGF P TN +
Sbjct: 134 IDIVIEGHTDNTGTDRINDPLSEQRAKEVKARLESNY-VSSRSIYTRGFGEYVPACTNAS 192
Query: 169 KVGRQNNQRIEIQIF 183
G+ N+R+E+ +
Sbjct: 193 PQGKACNRRVELMLI 207
>gi|170737617|ref|YP_001778877.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169819805|gb|ACA94387.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 170
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 24/178 (13%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
++ + + GC L ++ T + + F + E +
Sbjct: 17 ALLLCMLLVGCQTPP--PLHRGLTQTQVTALKSAGFQETGQGFEFGSTEPI--------- 65
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ L+ +++ I L + + ++D GT +
Sbjct: 66 ------------LFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDEGTAAYDA 113
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S+ RA+V+ L+ + I++ G P+ N T GR N+R I + PR
Sbjct: 114 ELSRRRAEVVAVELVD-VGLDAKRIAIVGKGKLDPVGDNRTPAGRAQNRRAAIVVSPR 170
>gi|159186121|ref|NP_356322.2| OmpA-like porin [Agrobacterium tumefaciens str. C58]
gi|159141255|gb|AAK89107.2| OmpA-like porin [Agrobacterium tumefaciens str. C58]
Length = 501
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 60/160 (37%), Gaps = 8/160 (5%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
V R S L+K Q ++ + ++ + + I F + +F
Sbjct: 321 PPKTVAPRQPSRLEKLMAFLQPEVDKKLVTLADVNGRLRVRINNSGLFTTGSADVSPQFR 380
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSN 149
++Q I L + I +TD++ +N +S+ RA + L Q
Sbjct: 381 DLIQRIGGALAAEKFRAVVI-GYTDTVPIKTVEFPSNWHLSEARAKAVGDILSQFTGPDA 439
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
I G A PI N T+ GRQ N+R EI + + K
Sbjct: 440 --ILTEGRADSDPIADNKTEEGRQINRRTEIMVLTNPDEK 477
>gi|300023960|ref|YP_003756571.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299525781|gb|ADJ24250.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 342
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 23/192 (11%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM----------QLQDTGIV 64
I+G A +K + R ++L + E + +L
Sbjct: 153 IAGLSDALDAAEKKGAESDKTIKDLGARLNAALAQQVQELKRYRSDFFGRLRELLKDRKD 212
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---STVIAIQSHT 117
+ +GD + L + + + IA + + P + I HT
Sbjct: 213 IRVVGDRFVFE-SEVLFSSGSASLTPEGMAAMDQIAEAILELQKEIPGDIDWALQINGHT 271
Query: 118 D----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
D S +N +S RA + YL+ RGV ++R ++ G+ P+D ++T+ Q
Sbjct: 272 DARPISNPQYPSNWELSTARAASVVKYLVLRGVPADRLVAA-GYGEFQPVDASNTEEAYQ 330
Query: 174 NNQRIEIQIFPR 185
N+RIE+++ R
Sbjct: 331 RNRRIELKLTSR 342
>gi|126728387|ref|ZP_01744203.1| OmpA/MotB family protein [Sagittula stellata E-37]
gi|126711352|gb|EBA10402.1| OmpA/MotB family protein [Sagittula stellata E-37]
Length = 168
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 17/177 (9%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKS-NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ + ++ C R S N + + S+D T
Sbjct: 1 MMLVAAFGLAACANPDRFGANGANDASRNGGGVSSGVIPGSVDDPT--------STAYFN 52
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
R+GD + + V + L + +L A L + I+ H D GT +
Sbjct: 53 QRVGDRV-------LFAVDQSSLSPEARTVLDGQAQWLMTNSDYMAVIEGHADEQGTREY 105
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NL + RA+ + YL+ RGVS +R V + + PI+ + N+R I
Sbjct: 106 NLALGARRANAVMEYLVSRGVSQSRLKFVS-YGKERPIEICSEEACYAKNRRAVTVI 161
>gi|332527567|ref|ZP_08403614.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
JA2]
gi|332111970|gb|EGJ11947.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
JA2]
Length = 214
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ L+ + L +A V+ HTD+ G N +S +RAD +K+YL+ +
Sbjct: 111 KAILKPEAKAKLDDLAAKAKAVNLEVVIAVGHTDATGPDGYNQKLSVKRADAVKAYLVDQ 170
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ G K P+ N T+ GR N+R+EI++
Sbjct: 171 -GIEKNRVYTEGKGEKQPVADNKTREGRAKNRRVEIEVV 208
>gi|330899454|gb|EGH30873.1| flagellar motor protein MotD [Pseudomonas syringae pv. japonica
str. M301072PT]
gi|330940674|gb|EGH43692.1| flagellar motor protein MotD [Pseudomonas syringae pv. pisi str.
1704B]
gi|330976021|gb|EGH76087.1| flagellar motor protein MotD [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 295
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 61/170 (35%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K + + + D F ++ + V I + + F
Sbjct: 84 KDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSMLFGSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K +++ +A I+ +F I ++ TD N +S R+ I
Sbjct: 144 DAMPSDKAFTIIEKVAGIVKRF-DNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVRM 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV+ R SV G+ PI N + GR N+R+ + I ++++
Sbjct: 203 LAMDGVNPARLASV-GYGEFQPIVPNTSTAGRAKNRRVVLVISRNLDVRR 251
>gi|220925333|ref|YP_002500635.1| peptidoglycan-associated lipoprotein [Methylobacterium nodulans ORS
2060]
gi|219949940|gb|ACL60332.1| peptidoglycan-associated lipoprotein [Methylobacterium nodulans ORS
2060]
Length = 172
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 51/174 (29%), Gaps = 24/174 (13%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+++ + +I+ C L A
Sbjct: 12 RAAVAVGLALSIAACSS-----------------------NKDLADASAYAAGGGAGGAA 48
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
D + L L A L+++P I+ H D GT
Sbjct: 49 TPGSAQDFVVNVGDRVFFETDSTDLTPTATATLDKQAQWLSRYPHYTFLIEGHADERGTR 108
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N + RA ++ YL RG++ +R +V + + P+ + N+R
Sbjct: 109 EYNFSLGARRAQTVRDYLASRGIAGSRMRTVS-YGKERPVAVCNDISCWSQNRR 161
>gi|78189654|ref|YP_379992.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like [Chlorobium chlorochromatii CaD3]
gi|78171853|gb|ABB28949.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like protein [Chlorobium chlorochromatii
CaD3]
Length = 211
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + F+ K +P LQ +A + + P+ + I++H DS G+ N+ + + RAD
Sbjct: 105 LGDILFDFDKSFIRKDAVPQLQDVAAWMKEHPTKNVTIEAHCDSKGSEAYNIALGKRRAD 164
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K+YL+ +G+ SNR ++ + P+ + R N+R+ +
Sbjct: 165 AAKAYLVNKGIDSNRLKTIS-YGKDKPLMNGIDESARARNRRVHFVV 210
>gi|325928224|ref|ZP_08189430.1| flagellar motor protein [Xanthomonas perforans 91-118]
gi|325541413|gb|EGD12949.1| flagellar motor protein [Xanthomonas perforans 91-118]
Length = 324
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 61/170 (35%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+A++ + V L ++ + + + I + R I I
Sbjct: 105 SMAAQMRMPVSLRNQAQLARAQRQMDAVEQQLSKTLAPLIDKQLITIRRNDLWIEVEINS 164
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L + L +A++L P+ + ++ +TD+ +N +S R
Sbjct: 165 DILFGTGSATLAGRARGTLSTLASVLRDAPNG-VRVEGYTDNQPIATAQFPSNWELSAAR 223
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + +++ G+ N T+ GR N+R+ + I
Sbjct: 224 AASVVHLFAD-DGIAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIIL 272
>gi|256424251|ref|YP_003124904.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256039159|gb|ACU62703.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 613
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 7/155 (4%)
Query: 37 DIVNKRFGSSLDKAEDEFQM-QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
D + K G +D Q D V + D + ++ + +
Sbjct: 460 DTLRKVSGDVIDTVAAPVVAIQTPDPAPVATPSADPDKSGLLDIYFDFNKAAINPAAAQV 519
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + + + P + + +HTDS G NL +SQ+RA + +YLI +GV+ +R IS +
Sbjct: 520 LDGLVKTIQENPDKSVELSAHTDSRGNDAFNLALSQKRATSVMNYLISKGVAKSR-ISAK 578
Query: 156 GFAYKYPID-----TNDTKVGRQNNQRIEIQIFPR 185
G+ ++ N ++ + N+R E ++ +
Sbjct: 579 GYGETKLLNRCGNGVNCSEDEHKLNRRTEFKLVKK 613
>gi|126740601|ref|ZP_01756288.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
gi|126718402|gb|EBA15117.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
Length = 644
Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 63/164 (38%), Gaps = 3/164 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
S K+ + + + L E+ + Q + V + +
Sbjct: 439 SHSKETPAEVSGFLSARLGEAESYDLKITYEEPPAPKDQPMSLEVCAEKLTSLQDVTGKI 498
Query: 81 SF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
F + L A +L + IQ HTDS G N +SQ RA I +
Sbjct: 499 HFEPGSATVAAGSSATLDKAAEVLELCGPIRLEIQGHTDSQGREGMNQSLSQARAQSILN 558
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L R + ++ + +G+ PI TND++ GR+ N+RIE ++
Sbjct: 559 ELRARRIRTSTIL-AKGYGESTPIATNDSEEGREANRRIEFKVI 601
>gi|107026971|ref|YP_624482.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116691833|ref|YP_837366.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105896345|gb|ABF79509.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116649833|gb|ABK10473.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
Length = 223
Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 10/187 (5%)
Query: 5 LGLSMFIMTTISGCGL-ASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--EFQMQLQDT 61
+ +F+ + + + + L + + D A L+
Sbjct: 36 TLMVLFLALYVLQLAKYNALDARYQTLARQAGGAATASVDAAKSDPAPPWLALLDSLKSN 95
Query: 62 G-IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G I + + I I + F + L P+L IA L++ + I ++ HTDS
Sbjct: 96 GRIALVKAPHGIEIGIDAKILFNVGDARLLPHSSPVLNQIAQALSEHATGDILVEGHTDS 155
Query: 120 IGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ ++N +S RA + + + ++ G A P+ D R N
Sbjct: 156 VPIANAKYESNWELSSARAGSVVR-YLTERGVAPHRLAAIGRADTQPLVAGDDAGSRARN 214
Query: 176 QRIEIQI 182
+R+ I +
Sbjct: 215 RRVTIFV 221
>gi|166711987|ref|ZP_02243194.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 324
Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 61/170 (35%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+A++ + V L ++ + + + I + R I I
Sbjct: 105 SMAAQMRMPVSLRNQAQLARAQRQMDAVEQQLSKTLAPLIDKKLITIRRNDLWIEVEINS 164
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L L +A++L + P+ + ++ +TD+ +N +S R
Sbjct: 165 DILFGTGSAALAGNARTTLSTLASVLREAPNG-VRVEGYTDNQPIATAQFPSNWELSAAR 223
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + +++ G+ N T+ GR N+R+ + I
Sbjct: 224 AASVVHLFAD-DGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIIL 272
>gi|122879266|ref|YP_202154.6| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 270
Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ G++ +G+ I L + +L + +++ I HTD
Sbjct: 153 SEQGVLDQTLGNRIIE------FQSGSSRLTPLGMRILDEMVEKMSQMKDARFLIIGHTD 206
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
++G ++NL +SQ RA +K Y++Q+G+ R +V+G P+ N + GR N+RI
Sbjct: 207 NVGQRESNLALSQARAQAVKDYIVQKGIDGARM-NVQGKGPDQPVADNASPDGRARNRRI 265
Query: 179 EIQI 182
+ +I
Sbjct: 266 QFKI 269
>gi|237859127|gb|ACR23739.1| outer membrane lipoprotein p6 [Avibacterium paragallinarum]
Length = 150
Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 57/176 (32%), Gaps = 34/176 (19%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
K+L + + ++ C + +
Sbjct: 4 FKKLLIVAGSVAVLAACSSSKHTETVAQTFG----------------------------- 34
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G V + + +E ++ +L A L P++ + ++ +TD G
Sbjct: 35 GYSVQDLQQ----RYNTVYFGFDKYNIEGEYQQILDAHAAYLTATPASKVLVEGNTDERG 90
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
T + N+ + Q RAD + +YL + +S + + P + T+ N+R
Sbjct: 91 TPEYNIALGQRRADAVANYLSAK-GVQATQLSTVSYGEEKPTELGHTEAAYAKNRR 145
>gi|268679162|ref|YP_003303593.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
gi|268617193|gb|ACZ11558.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
Length = 166
Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 65/185 (35%), Gaps = 21/185 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ +L L+ + + G + + + + DT S+L K +
Sbjct: 1 MGKLALTSLAVAVLVLTGCSQKSPEVDMTKSTADTQSSVDDGMSALQKLIASLEA----- 55
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDS 119
+ + K + A + N + + I ++ + D
Sbjct: 56 -------------NSKTIYFDFDKYNVRKDQQTNIDANAALFNSAEAKNFSIKVEGNCDE 102
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N + +RA +K L+ +G++++R ++V + P K N+R E
Sbjct: 103 FGTDEYNYALGLKRAKSVKDGLVAKGMNADR-LTVVSYGESNPAVNEHNKDAWAKNRRAE 161
Query: 180 IQIFP 184
++ P
Sbjct: 162 FKVLP 166
>gi|212634139|ref|YP_002310664.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212555623|gb|ACJ28077.1| OmpA [Shewanella piezotolerans WP3]
Length = 187
Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 65/187 (34%), Gaps = 6/187 (3%)
Query: 2 IKELGLSMFIMTTISGCGLA-----SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
++ L L + + +G A S + V++R +S +
Sbjct: 1 MRWLILVLGVYILAAGSAYARDWHDSDADGVPDKKDACVQSQVDQRVNASGCAYKARTTT 60
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
T V + ++ + +L+ I+ L + P + + +
Sbjct: 61 LCLRTITGVFYPASCTQLSSNIVKFEFAKSEILSSQRAVLERISAWLTQVP-ARLLLVGY 119
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDSIG N +S RA +K LI ++G + PI N T GR N+
Sbjct: 120 TDSIGGEAFNHRLSLLRAKSVKQALITEFNFEPERFDIKGVGSQAPIANNRTGSGRALNR 179
Query: 177 RIEIQIF 183
R+E +
Sbjct: 180 RVEFYVV 186
>gi|239906031|ref|YP_002952770.1| putative peptidoglycan-associated lipoprotein [Desulfovibrio
magneticus RS-1]
gi|239795895|dbj|BAH74884.1| putative peptidoglycan-associated lipoprotein [Desulfovibrio
magneticus RS-1]
Length = 171
Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 56/149 (37%), Gaps = 4/149 (2%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ G+S ++ E + +L+ ++ ++G + + L +
Sbjct: 24 AKKAGGPGDGSGTSWEEQE---RARLEQERLLREKLGAASNELAQMVHFALDSSNLSAEA 80
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L A IL ++P + ++ + D GT + NL + + RA + +
Sbjct: 81 RQNLTRKAEILRQYPQIKLIVEGNCDQRGTAEYNLALGERRAQAAAQ-YLVNLGIGADRL 139
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S + + P+D ++ N+R E +
Sbjct: 140 STVSYGKERPLDPGTSEAAYAKNRRDEFR 168
>gi|302553861|ref|ZP_07306203.1| type VI secretion system OmpA/MotB [Streptomyces viridochromogenes
DSM 40736]
gi|302471479|gb|EFL34572.1| type VI secretion system OmpA/MotB [Streptomyces viridochromogenes
DSM 40736]
Length = 213
Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 55/143 (38%), Gaps = 1/143 (0%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQ 97
V + + + ++ + + + V F L + +
Sbjct: 64 VEGATLADAKVLDIKTVVEDESGDERREDTNSDVKFALQAEVLFGKDSAKLGAQAKARIA 123
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
IA + + I + TD++G+ + +S+ RA ++ L S RG+
Sbjct: 124 DIAEEIKAQNAKKIRVFGFTDNLGSSAHGDALSRRRASAVQGVLEGELADSGITYETRGY 183
Query: 158 AYKYPIDTNDTKVGRQNNQRIEI 180
+YPI N T+ GR+ N+R+E+
Sbjct: 184 GEQYPIADNSTEAGRKKNRRVEV 206
>gi|126741155|ref|ZP_01756836.1| hypothetical protein RSK20926_01547 [Roseobacter sp. SK209-2-6]
gi|126717792|gb|EBA14513.1| hypothetical protein RSK20926_01547 [Roseobacter sp. SK209-2-6]
Length = 474
Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 7/149 (4%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIA 100
+ K + ++ + V + G+++ + F S L K F +Q +A
Sbjct: 325 TIEEQIAKVSGFLEPEIAGGIVKVFQKGNVLIIRLAGSGMFGSGSDQLSKAFRTPVQRLA 384
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRG 156
LN VI + H+D+I + N+ +S RA + + + R +S G
Sbjct: 385 EALNDEKGQVIVV-GHSDNIPIRSSRFPSNMALSLARAKSVMEGMAKAMAEPER-LSAEG 442
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
A + PI N TK GR N+RIEI +
Sbjct: 443 RADQEPIADNGTKAGRAKNRRIEILLVQE 471
>gi|150388324|ref|YP_001318373.1| OmpA/MotB domain-containing protein [Alkaliphilus metalliredigens
QYMF]
gi|149948186|gb|ABR46714.1| OmpA/MotB domain protein [Alkaliphilus metalliredigens QYMF]
Length = 314
Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 13/156 (8%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA---TILN 104
D E+E V + V ++ ++ +L +A +
Sbjct: 143 DSVEEEMARTRDRRDSPVYIADNGNIVIDEELVFDLNSYQIKPAGRQVLDELAMAFENIL 202
Query: 105 KFPSTV-----IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS----VR 155
+ P I IQ HTD IG+ + N +S R+ + +YL+ + +
Sbjct: 203 RDPEVRVNIDAINIQGHTDDIGSAEYNRNLSANRSVEVVNYLLNSNPTLENRYASYFMAS 262
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEI-QIFPRGNIKK 190
++ PI +N T+ R N+RIEI I NI++
Sbjct: 263 AYSKFRPIASNATEANRAQNRRIEISIILKDSNIQE 298
>gi|310816576|ref|YP_003964540.1| OmpA/MotB family protein [Ketogulonicigenium vulgare Y25]
gi|308755311|gb|ADO43240.1| OmpA/MotB family protein [Ketogulonicigenium vulgare Y25]
Length = 185
Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 9/190 (4%)
Query: 2 IKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+ + ++ + +S C + SN +
Sbjct: 1 MHKFLIAGLLVSAVALSACS----RPDRSATGDSNSPYGAGGYTSPYGAGGYGQGVGAGG 56
Query: 60 DTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I + F + + + +L A L I I+ H D
Sbjct: 57 AGSASDPTSQAYFNQTIGDRILFAVDQSSVSSEASQILNGQAQWLQTNSQYGIVIEGHAD 116
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N+ + RA+ ++ YLI R S I + + PI + N+R
Sbjct: 117 EQGTREYNVALGARRANAVREYLISR-GISANRIRTVSYGKERPIAVCSAESCYTQNRRA 175
Query: 179 EIQIFPRGNI 188
+ + G I
Sbjct: 176 -VTVISVGGI 184
>gi|261868491|ref|YP_003256413.1| peptidoglycan-associated lipoprotein [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|293390507|ref|ZP_06634841.1| peptidoglycan-associated lipoprotein [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|62548396|gb|AAX86841.1| peptidoglycan-associated lipoprotein [Aggregatibacter
actinomycetemcomitans]
gi|261413823|gb|ACX83194.1| peptidoglycan-associated lipoprotein [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|290951041|gb|EFE01160.1| peptidoglycan-associated lipoprotein [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 155
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 61/179 (34%), Gaps = 31/179 (17%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + L + ++ CG +++ +S + FG
Sbjct: 1 MNKFTKALLVAGSVAVLAACGSSNKN-------ESGSGSNNGQTFGGY------------ 41
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + +E ++ +L A LN P+T + ++ +TD
Sbjct: 42 ---------SVQDLQQRYNTVYFGFDKYDIEGEYTQILDAHAAYLNATPATSVRVEGNTD 92
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + + RA ++++L + IS + + P + N+R
Sbjct: 93 ERGTPEYNMALGERRARAVQNFLTAK-GVKAGQISTVSYGEEKPAVLGHDESAYAKNRR 150
>gi|77165349|ref|YP_343874.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|254434450|ref|ZP_05047958.1| OmpA family protein [Nitrosococcus oceani AFC27]
gi|76883663|gb|ABA58344.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|207090783|gb|EDZ68054.1| OmpA family protein [Nitrosococcus oceani AFC27]
Length = 466
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 44/102 (43%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ LE L +A + P I I + D+ G L N +S++RA+ +
Sbjct: 342 DRFRLESAALEPHHRRQLNDLANQVKSNPYAEIEIVGYADTTGPLAFNQRLSEQRANAVC 401
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
YL+ RGV ++ S G P+ + R N+R+EI
Sbjct: 402 DYLLSRGVEGSKIKSASGRGEGEPLVPERAEADRARNRRVEI 443
>gi|78046418|ref|YP_362593.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78034848|emb|CAJ22493.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 400
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 73 TCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + F + + +L + L K + + ++ HTD+ G+ N +S+
Sbjct: 285 LITLNDRILFDFDKSDIRPDAARVLDTLGAALTKVTAKDMQVRGHTDAKGSDDYNQALSE 344
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQI 182
RA+ + + L RG + + +G+ P+ N D GRQ N+R+EI +
Sbjct: 345 RRANAVLAALRARGAAQSAN--AKGYGESQPVAPNTLNGQDNPGGRQLNRRVEIFL 398
>gi|77359154|ref|YP_338729.1| hypothetical protein PSHAa0183 [Pseudoalteromonas haloplanktis
TAC125]
gi|76874065|emb|CAI85286.1| putative outer membrane protein; signal peptide [Pseudoalteromonas
haloplanktis TAC125]
Length = 354
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 71/180 (39%), Gaps = 8/180 (4%)
Query: 15 ISGCGLASREKKKVF----LHKSNDTDIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIG 69
+ G + E + + + D N + D+ + + TG +
Sbjct: 175 LFGQSSVAEEPVQPAPEPVIVEVAPVDSDNDNIPDADDQCPNTPMTDAVDGTGCTLYEDK 234
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
++ + + + ++L + +A L ++P T + ++ HT S+G N +
Sbjct: 235 EVTVSLL--VTFPNNTSAVSTQYLNDIDKVAEFLKEYPDTTVLLEGHTSSVGKASYNKWL 292
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
S++RAD + L+ + I+ G + + +TK + N+R+E I N+K
Sbjct: 293 SKKRADAVAKKLVA-DGVAEDRITTVGLGEERLKNEANTKAAHEENRRVEAHIKTIKNVK 351
>gi|289662354|ref|ZP_06483935.1| flagellar motor protein MotD [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 324
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 60/170 (35%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+A++ + V L ++ + + + I + R I I
Sbjct: 105 SMAAQMRMPVSLRNQAQLARAQRQMDAVEQQLSKTLAPLIDKKLITIRRNDLWIEVEINS 164
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L L +A++L P+ + ++ +TD+ +N +S R
Sbjct: 165 DILFGTGSAALAGNARATLSTLASVLRDAPNG-VRVEGYTDNQPIATAQFPSNWELSAAR 223
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + +++ G+ N T+ GR N+R+ + I
Sbjct: 224 AASVVHLFAD-DGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIIL 272
>gi|83950087|ref|ZP_00958820.1| peptidoglycan-associated lipoprotein [Roseovarius nubinhibens ISM]
gi|83837986|gb|EAP77282.1| peptidoglycan-associated lipoprotein [Roseovarius nubinhibens ISM]
Length = 186
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 59/187 (31%), Gaps = 21/187 (11%)
Query: 2 IKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K + + ++ C R + + GS+ D + Q
Sbjct: 16 MKTFQKAMILGTGLLLAACSSPDR-FGDSTVDLNGTGANSGVIAGSASDPTSPAYFSQTV 74
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + V + L L A L + I+ H D
Sbjct: 75 GDRV----------------LFPVDQHTLTSTAQQTLNGQAQWLLRNTDYDALIEGHADE 118
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + RA+ ++ YLI + + + V + + PI+ + N+R
Sbjct: 119 QGTREYNLALGARRANSVQEYLISQ-GVPSTRLKVISYGKERPIEICSEESCYAQNRR-S 176
Query: 180 IQIFPRG 186
+ + G
Sbjct: 177 VTVISAG 183
>gi|90426398|ref|YP_534768.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
gi|90108412|gb|ABD90449.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 464
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 7/171 (4%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM 71
+SG + + + K E + V +
Sbjct: 300 AVMLSG------DALYDDAVSQIRAGLAKELPQGWQVKTEVSVKPAAAPVDPTVCQQLFS 353
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
++ + +L + + P+ I I HTD G N +S+
Sbjct: 354 DLLGKSKIRFESGRATIDPDSVGLLDRLIETALRCPTATIEIAGHTDGDGDGAFNQTLSE 413
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+RA + Y+++ G+ + R G+ P+ ND G+ N+RIE +
Sbjct: 414 KRAQAVAEYMVRAGLPAER-FRPVGYGSTTPVAPNDNDEGKAQNRRIEFMV 463
>gi|221066746|ref|ZP_03542851.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
gi|220711769|gb|EED67137.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
Length = 170
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 24/178 (13%), Positives = 59/178 (33%), Gaps = 15/178 (8%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L ++ + + C A K + + + + + +
Sbjct: 6 RLCAALLLSLGLIACSSAPTSNKTSHHYAYGRPTVSTASGVAPIVATSQSGKKGPANAAH 65
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+V + +++ A + P + ++ HTDS G
Sbjct: 66 IV--------------YFDFDSYTVRPSDRGIVESHAQWMRNNPRQALILRGHTDSRGGT 111
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ NL + Q+R++ + L G+ +R + + + +D + Q N+R+E +
Sbjct: 112 EYNLALGQKRSESVLQSLQILGIDPSR-VEAISYGKERLVDLGSSNDAHQLNRRVEFE 168
>gi|300704849|ref|YP_003746452.1| peptidoglycaN-associated lipoprotein, protein pal, component of
tol-pal system [Ralstonia solanacearum CFBP2957]
gi|299072513|emb|CBJ43863.1| Peptidoglycan-associated lipoprotein, protein pal, component of
tol-pal system [Ralstonia solanacearum CFBP2957]
Length = 172
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 14/164 (8%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + + R + +D DE
Sbjct: 22 CSSGVKLDDTSKNATGGAATGADTRNVTPVDVTRDEL-------------TDPNSPLAKR 68
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ ++ +L A L + IQ +TD GT + NL + Q+RA+ +
Sbjct: 69 SVYFDFDSYTVKSEYQGLLSQHARYLQSHNQRKVLIQGNTDERGTSEYNLALGQKRAEAV 128
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ L +GV ++ +V + P T + N+R +I
Sbjct: 129 RRALSSQGVPDSQMEAVS-LGKEKPQATGHDEESWAQNRRSDIV 171
>gi|149202108|ref|ZP_01879081.1| OmpA family protein [Roseovarius sp. TM1035]
gi|149144206|gb|EDM32237.1| OmpA family protein [Roseovarius sp. TM1035]
Length = 179
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 63/182 (34%), Gaps = 8/182 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFL--HKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
++ + ++ A +++ V + D D AE +
Sbjct: 1 MRGASAIALGVAVMASGASAQQQRTVVGERYIPTIWVDPDGCEHWVMDDGAEGYMSPHVT 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
GI V R ++ + + L+ + + I HTDS
Sbjct: 61 RQGIPVCREVNLCGVVNTDQLFATDSARIHASGQQRLRE---FFQQAGAVSYTIVGHTDS 117
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ + N+ +S RA+ + + G S VRG+ + P +N+T G N+R+E
Sbjct: 118 RASDEYNMDLSLRRANSVAAVARSSGASIAD---VRGYGERVPKASNNTAEGMAQNRRVE 174
Query: 180 IQ 181
I
Sbjct: 175 IL 176
>gi|94496180|ref|ZP_01302758.1| OmpA/MotB [Sphingomonas sp. SKA58]
gi|94424359|gb|EAT09382.1| OmpA/MotB [Sphingomonas sp. SKA58]
Length = 172
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 54/166 (32%), Gaps = 15/166 (9%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + ++ + + + + +
Sbjct: 19 CSKKPPAELPPAPGGTDAGSTMPTGPATPAGPRKGSQEDFVAS-------------VASD 65
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + ++ + LQ A L + PS + I+ H D GT N+ + + RA+
Sbjct: 66 RIFFGLDQYDVDAEDQATLQSQAAWLQQNPSVRVTIEGHADERGTRDYNIALGERRANAA 125
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IEIQI 182
K+YL G+ R I+ + + P + N+R + + I
Sbjct: 126 KNYLASLGIDPGR-ITTVSYGKERPAALGSDEAAWAQNRRAVTVTI 170
>gi|78061292|ref|YP_371200.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77969177|gb|ABB10556.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 220
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L L + + + +++ TDS+G+ NL +S+ RA+ +
Sbjct: 115 DALFATDHATLAPTARESLDRLLSERADHTYSQVSVTGFTDSVGSDDYNLALSKRRAESV 174
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++ ++V G P+ +N T GR +N+R+EI++
Sbjct: 175 -ATYLKAHGLKTDSLTVTGRGKADPVASNATPEGRASNRRVEIRL 218
>gi|32491160|ref|NP_871414.1| hypothetical protein WGLp411 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166367|dbj|BAC24557.1| pal [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 170
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 71/181 (39%), Gaps = 19/181 (10%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL-DKAEDEFQMQLQD 60
+K + LS+ +++ IS C + ++ K + + ++ + + + + +E +LQ
Sbjct: 7 LKSIVLSIPLISMIS-C-TSKKQVKNIDEPVISSSENTDSNVNNIMPEGSELSNSQELQQ 64
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + ++ +F +L + L PS I I+ H D
Sbjct: 65 NNI---------------VYFDLDKYVVKDEFTQILDAHSDFLKNNPSYKIVIEGHADER 109
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + +Q + + V + + P + N+R+ +
Sbjct: 110 GTSEYNIALGERRAKSV-KIYLQSKGVLDDQMKVISYGKEKPAILGHDETTYAKNRRVVL 168
Query: 181 Q 181
Sbjct: 169 T 169
>gi|146301711|ref|YP_001196302.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146156129|gb|ABQ06983.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 642
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ R ++ I + + + + L + +++++PS VI I+SHTDS +
Sbjct: 517 IERKDGLLKIKIGIIFFDLDKSDVRYDAAIELNKVVLLMSQYPSVVIKIESHTDSRANDQ 576
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIE 179
NL +S RA + Y+I +G++ R S G+ I+ T+ Q N+R E
Sbjct: 577 YNLELSDRRAKATRDYIISQGIAPERIESAIGYGETQLINNCSNGVPCTEAQHQMNRRSE 636
Query: 180 IQIF 183
I
Sbjct: 637 FIIT 640
>gi|218676336|ref|YP_002395155.1| putative protein F-related protein [Vibrio splendidus LGP32]
gi|218324604|emb|CAV26143.1| putative protein F-related protein [Vibrio splendidus LGP32]
Length = 203
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 79/199 (39%), Gaps = 24/199 (12%)
Query: 7 LSMFIMTTISGCGLA-----------SREKKK---------VFLHKSNDTDIVNKRFGSS 46
L++ + ++GC K + ++ + +G
Sbjct: 4 LAIMLSIALAGCETTLPTGLFGEDMLQTAPKTDYDIMYPEWGVVQTTHQQGTITTNYGRG 63
Query: 47 LDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILN 104
+ D ++ L+ I + G+ + + HV+F E + L + + L+
Sbjct: 64 VST-NDPLEVFLRQNRIDFEVLPGNHVMVKLVQHVNFKTGSTSPEPAYNNWLDTLGSYLS 122
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ + I+ HTD+ G+ + N +S++RA +K+ L S+R I RGF P
Sbjct: 123 RRQDIDVVIEGHTDNTGSDRVNDPLSEQRAKEVKARLESNY-VSSRAIYTRGFGEYVPAC 181
Query: 165 TNDTKVGRQNNQRIEIQIF 183
N + G+ N+R+E+ +
Sbjct: 182 NNASVQGKACNRRVELMLI 200
>gi|86138055|ref|ZP_01056630.1| hypothetical protein MED193_00970 [Roseobacter sp. MED193]
gi|85825082|gb|EAQ45282.1| hypothetical protein MED193_00970 [Roseobacter sp. MED193]
Length = 477
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 7/150 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLI 99
+ + K D ++ + + V + G+ + + F S L K F + +
Sbjct: 327 QTLEEQVAKVADFLGPEIDEGIVQVFQKGNTLIIRLAGSGMFGSGSDQLSKAFKTPVARV 386
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVR 155
A LN VI + H+D++ + N+ +S RA + S + Q +R +S
Sbjct: 387 AEALNDEKGQVI-VAGHSDNVPIRSSRFPSNMALSLARAKSVMSGMAQVFDDPDR-LSAE 444
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
G A K PI N TK GR N+RIEI +
Sbjct: 445 GRAEKEPIADNGTKAGRAKNRRIEILLVQE 474
>gi|326315314|ref|YP_004232986.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323372150|gb|ADX44419.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 379
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + P ++ + +L + S +A+ +TD+ G +N +S+ RA + +
Sbjct: 277 FATDKTDILPDSQPQIEQVVQLLRQDASLKLAVNGYTDNTGDAAHNKTLSEGRAKAVAAA 336
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +G+ ++R S GF P+ N T G+ N+R+E+
Sbjct: 337 VAAQGIDASRLSSA-GFGAADPVADNATDEGKAKNRRVELV 376
>gi|16759268|ref|NP_454885.1| hypothetical protein STY0305 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142957|ref|NP_806299.1| hypothetical protein t2581 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213052080|ref|ZP_03344958.1| hypothetical protein Salmoneentericaenterica_03522 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213428430|ref|ZP_03361180.1| hypothetical protein SentesTyphi_24568 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|289805848|ref|ZP_06536477.1| hypothetical protein Salmonellaentericaenterica_15952 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
gi|25513281|pir||AI0536 probable membrane protein STY0305 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16501559|emb|CAD08737.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138589|gb|AAO70159.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|329805048|gb|AEC05360.1| putative membrane protein [Salmonella enterica]
Length = 433
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 64/185 (34%), Gaps = 9/185 (4%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHK--SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
G+++ M T+ G + + V + + + + + ++ +
Sbjct: 250 GIALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPVPVHKLRLKILLANEIARGLL 309
Query: 64 VVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V F + + P++ A + + + + HTDS
Sbjct: 310 TVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA-VTVTGHTDSQPI 368
Query: 123 LKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S++RA + + L GV + R + + G P+ N +K GR N+R+
Sbjct: 369 HSAEFPSNLVLSEKRAAEVAALLTSGGVPAGR-VHIVGKGDTVPVADNGSKAGRAKNRRV 427
Query: 179 EIQIF 183
EI +
Sbjct: 428 EILVV 432
>gi|224369952|ref|YP_002604116.1| MotB2 [Desulfobacterium autotrophicum HRM2]
gi|223692669|gb|ACN15952.1| MotB2 [Desulfobacterium autotrophicum HRM2]
Length = 244
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK--- 124
G +I + L++ +L I ++ ++P I I+ +TD I
Sbjct: 120 DGKVIVTINGQTLFDSGSANLKQGATAILDRIVAVVFEYPEYSINIKGYTDDIPIETAQF 179
Query: 125 -NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+N +S RA + +LIQ+ + + ++ G+A P+ N + R N+R+E +
Sbjct: 180 PSNWELSAIRATTVLKHLIQK-GINPKRLTATGYADMEPLVPNTSDTNRAINRRVEFVLE 238
Query: 184 PRGN 187
+
Sbjct: 239 KKAT 242
>gi|220905238|ref|YP_002480550.1| OmpA/MotB domain-containing protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869537|gb|ACL49872.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 331
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 7/159 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S+ ++ + G L ++ + + D +
Sbjct: 177 SKNGEETIKQVAALNPATIVVRGEELATSDAALERFVLS-----VFCQDEDVIVLRGVHF 231
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ L+ K + +L A ++ P+ + + TD IG+ N+ +SQERA+ +K+YL
Sbjct: 232 AFNSYALDGKAMGILNEAAGLIKANPNKRVVLAGWTDWIGSDAYNMKLSQERANSVKNYL 291
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+++G+ ++R + G + N+T GR N+R EI
Sbjct: 292 VKQGIPASRM-TAIGRGKSF-KYNNETAEGRAMNRRTEI 328
>gi|217976969|ref|YP_002361116.1| peptidoglycan-associated lipoprotein [Methylocella silvestris BL2]
gi|217502345|gb|ACK49754.1| peptidoglycan-associated lipoprotein [Methylocella silvestris BL2]
Length = 169
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 45/174 (25%), Gaps = 25/174 (14%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ + IS C E +
Sbjct: 11 KIAAVLGAALAISACAKNPAEDPNALASSAGRGGPAIPGSPQDF---------------- 54
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+GD + L L A L ++ ++ H D GT
Sbjct: 55 -AVNVGDRV-------FFESDSSELSSTAQATLDKQARWLRQYAKANFTVEGHADERGTR 106
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N + RA+ K+YL+ R I + + P+ + N+R
Sbjct: 107 EYNFALGARRAEAAKAYLVAR-GIPAAGIHTISYGKERPVAVCNDISCWSQNRR 159
>gi|58427732|gb|AAW76769.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 272
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ G++ +G+ I L + +L + +++ I HTD
Sbjct: 155 SEQGVLDQTLGNRIIE------FQSGSSRLTPLGMRILDEMVEKMSQMKDARFLIIGHTD 208
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
++G ++NL +SQ RA +K Y++Q+G+ R +V+G P+ N + GR N+RI
Sbjct: 209 NVGQRESNLALSQARAQAVKDYIVQKGIDGARM-NVQGKGPDQPVADNASPDGRARNRRI 267
Query: 179 EIQI 182
+ +I
Sbjct: 268 QFKI 271
>gi|94987133|ref|YP_595066.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Lawsonia intracellularis PHE/MN1-00]
gi|94731382|emb|CAJ54745.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Lawsonia intracellularis PHE/MN1-00]
Length = 162
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T + + ++ ++ MLQ A +L ++P + I+ + D+ GT + NL + +
Sbjct: 51 TITDGIIYFDFDKYDIKPEYRDMLQKKAELLKEYPCIRVRIEGNCDARGTQEYNLALGER 110
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA YL+ + + + F + P N+R + +I +
Sbjct: 111 RARAAYEYLVML-GVNPSQLEIISFGKERPAVEGTGPAVWAKNRRDDFRIIAK 162
>gi|146299407|ref|YP_001193998.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146153825|gb|ABQ04679.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 666
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
IP++ + + ++K +P LQ + +LN++P+ + I+SHTDS + ++N ++S +
Sbjct: 550 LLKIPMNFFDLGKATIKKSSVPQLQKMVDMLNQYPTIKVDIRSHTDSRSSSESNQILSDK 609
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFP 184
RA K +L+ + + ++ +GF ++ T+ Q N+R E I
Sbjct: 610 RAQSTKDWLVSK-GINADRLTAKGFGETQLVNKCADGVKCTEQQHQQNRRSEFIIVS 665
>gi|86740618|ref|YP_481018.1| OmpA/MotB [Frankia sp. CcI3]
gi|86567480|gb|ABD11289.1| OmpA/MotB [Frankia sp. CcI3]
Length = 363
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 58/179 (32%), Gaps = 7/179 (3%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-----KAEDEFQMQLQDTG 62
TT++ G A E + L ++LD E + T
Sbjct: 182 VTVSGTTVAVAGSAPDEATRRRLGAQVLAAAGTTVPDATLDNRLVVPREKPAAAAAKSTS 241
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ V L L +A L V+ + H D+ G+
Sbjct: 242 DAGALAALRAALDARNVTFPVGAATLSPPARLWLDRVAAALRA-GRVVVLVGGHADASGS 300
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N +S +RA + + + I V GF ++P+ N T GR N+R+EI
Sbjct: 301 ATLNQALSLDRAQ-VIADYLTDRGVRPDLIRVAGFGSRWPVADNATPRGRAANRRVEIV 358
>gi|262376393|ref|ZP_06069622.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262308532|gb|EEY89666.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 255
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 60 DTGIVVSRIGDMIT---CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + V++ I + L + +L + + LNK I I H
Sbjct: 130 NAQLSVNQAEQRIIDAALKNRIIEFESGSAVLATSGIQILDEMVSALNKVSGKKIRIIGH 189
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS G + NL++SQ+RA+ +KSYLI + +S +G P+ N T GR+ N+
Sbjct: 190 TDSSGDINKNLMLSQQRAEAVKSYLIAK-NVPTHLLSTKGSGSSKPVADNATADGRKRNR 248
Query: 177 RIEIQIF 183
RIE ++
Sbjct: 249 RIEFEVL 255
>gi|228987761|ref|ZP_04147872.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228772035|gb|EEM20490.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 234
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 61/175 (34%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S E+ K + K + + + +
Sbjct: 55 LSA-SSLEAEQAKKQEEAREKEKKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 113
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++ +L I + HTD++ +N +
Sbjct: 114 TILENVLFDSGKADVKLESLSIAKEMSNLLVSASPREITVSGHTDNVPIANAQFASNWEL 173
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 174 STQRAVNFMQVLLQNKELQPGKFSAVGYGEYRAIAPNDTQEGKAKNRRVEVFILP 228
>gi|225872880|ref|YP_002754337.1| outer membrane protein A [Acidobacterium capsulatum ATCC 51196]
gi|225792630|gb|ACO32720.1| outer membrane protein A [Acidobacterium capsulatum ATCC 51196]
Length = 263
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 63/206 (30%), Gaps = 30/206 (14%)
Query: 8 SMFIMTTISGCGLAS---------------------------REKKKVFLHKSNDTDIVN 40
+ + +GC + K
Sbjct: 16 AASSLLFTAGCATKKYVRSQTQPLVEQTHELNQVTAQNHREIQNVDKRAQSGIQQAQGAA 75
Query: 41 KRFGSSLDKAEDEFQMQLQDTGI---VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ S D A Q + T VVS + + ++ L + L
Sbjct: 76 QTAQQSADSANQSAQQAMSQTNALSGVVSNLDNYQPVAQINVTFGFNKAVLSRGDKSKLD 135
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A+ + ++A+ TDS GT N +SQ RA ++ YL V G
Sbjct: 136 QLASQMGSTKGYIVALTGSTDSTGTKAYNDQLSQRRAQAVERYLAATYHVPPYKFYVLGL 195
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +N T GR N+R+++Q+
Sbjct: 196 GKADEVASNRTASGRAKNRRVQVQLL 221
>gi|148258086|ref|YP_001242671.1| outer membrane lipoprotein omp16 [Bradyrhizobium sp. BTAi1]
gi|146410259|gb|ABQ38765.1| Outer membrane lipoprotein omp16 precursor
(peptidoglycan-associated lipoprotein) [Bradyrhizobium
sp. BTAi1]
Length = 149
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 55/170 (32%), Gaps = 30/170 (17%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ + ++ C + + + V
Sbjct: 1 MLAVALSMGACANKNLTGADGAMASAATPGSQQD----------------------FVVN 38
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+GD + + L + + L+ A L +P I+ H D GT + N+
Sbjct: 39 VGDRV-------FFESDQTDLTPQAIATLEKQAQWLQTYPRYSFTIEGHADERGTREYNI 91
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ RA ++++L+ RG+ R ++ + + P+ + N+R
Sbjct: 92 ALGARRAQSVRNFLVSRGIDQGRMRTIS-YGKERPVAVCNDISCWSQNRR 140
>gi|124005143|ref|ZP_01689985.1| outer membrane protein, putative [Microscilla marina ATCC 23134]
gi|123989395|gb|EAY28956.1| outer membrane protein, putative [Microscilla marina ATCC 23134]
Length = 329
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 59/149 (39%), Gaps = 2/149 (1%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDT-GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + + +D I + + L L
Sbjct: 182 QNGSSYAFYATTINKKTKQETKDQINIRLIPYKVGAKIPLYNITFATKSARLNTHSFEEL 241
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ +L P++ I I++HTDS GT NL +SQ+RA + + + + + + + RG
Sbjct: 242 GRVVKLLKDHPTSHILIEAHTDSDGTRLANLRLSQQRAKSVYN-YLMKQGIAAQRLQTRG 300
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
PI N+T++ + N+R E+ + +
Sbjct: 301 AGELKPIAPNNTEINKARNRRFELIVMKK 329
>gi|84393843|ref|ZP_00992588.1| putative outer membrane protein [Vibrio splendidus 12B01]
gi|84375538|gb|EAP92440.1| putative outer membrane protein [Vibrio splendidus 12B01]
Length = 203
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 67/187 (35%), Gaps = 6/187 (3%)
Query: 1 MIKELGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K L + ++T + C +E+ + ++ + + A D +
Sbjct: 1 MMKVTYLLLPVLTMTLFACSS-QQEEAYIETPEAEQIADLQDDDNDGVVNARDTCPGTPE 59
Query: 60 DTGIVVSRIGDMIT---CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + G+ I + + F + +A L + S I IQ +
Sbjct: 60 ASQVDNDGCGETIRAEEVRQLKILFAHDSFEVNPIFSDQISTMAEFLETYKSASIEIQGY 119
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+G+ + NL +S+ RA+ ++ L+ + + G+ + + D N+
Sbjct: 120 ASKVGSNEYNLDLSKRRANNVQDELLSN-GIEPERVRIVGYGEERLENEGDDATSHALNR 178
Query: 177 RIEIQIF 183
++ +
Sbjct: 179 KVTATVV 185
>gi|229158119|ref|ZP_04286188.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342]
gi|228625348|gb|EEK82106.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342]
Length = 234
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 61/175 (34%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S E+ K + K + + + +
Sbjct: 55 LSA-SSLEAEQAKKQEEAREKEKKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 113
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++ +L I + HTD++ +N +
Sbjct: 114 TILENVLFDSGKADVKLESLSIAKEMSNLLVSASPREITVSGHTDNVPIANAQFASNWEL 173
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 174 STQRAVNFMQVLLQNKELQPGKFSAVGYGEYRAIAPNDTQEGKAKNRRVEVFILP 228
>gi|163753666|ref|ZP_02160789.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Kordia algicida OT-1]
gi|161325880|gb|EDP97206.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Kordia algicida OT-1]
Length = 626
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 24/196 (12%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD---TGIVVSRIG 69
+SG + S TD K + +Q + V+
Sbjct: 433 AALSG-ANVVLADDQGNSVGSKTTDAEGKVTFKVECDKSSRLEATIQGYVPQQVDVNSGD 491
Query: 70 DMI----------------TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
D + + + + L + ++ K+P+ VI +
Sbjct: 492 DPTKLVEIPLAPIEEIIEDVIVLNPIYFDFDKHNIRQDAAFELDKVVNVMTKYPNMVIKV 551
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND---TKV 170
++HTD G+ N +S+ RA Y+I +G+ ++R +S G P+ T+
Sbjct: 552 ETHTDIRGSASYNQRLSERRAKSTVQYIISKGIDASR-LSSEGKGESSPLIDCGNKCTEE 610
Query: 171 GRQNNQRIEIQIFPRG 186
Q N+R + I +
Sbjct: 611 EHQQNRRSDFIIVSKD 626
>gi|325916150|ref|ZP_08178436.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
gi|325537641|gb|EGD09351.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
Length = 324
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 60/170 (35%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+A++ + V L ++ + + + I + R I I
Sbjct: 105 SMAAQMRMPVSLRNQTQLARAQRQMDAVEQQLSKTLSPLIDKKLITIRRNDLWIEVEINS 164
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L L +A++L P+ + ++ +TD+ +N +S R
Sbjct: 165 DILFGTGSATLAGGARGTLSTLASVLRDAPNG-VRVEGYTDNQPIATVQFPSNWELSAAR 223
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + +++ G+ N T+ GR N+R+ + I
Sbjct: 224 AASVVHLFAD-DGIAPQRLAMVGYGEFRARADNTTEAGRNANRRVVLIIL 272
>gi|330953776|gb|EGH54036.1| flagellar motor protein MotD [Pseudomonas syringae Cit 7]
Length = 295
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 7/170 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K + + + D F ++ + V I + + F
Sbjct: 84 KDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSMLFGSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K +++ +A I+ +F I ++ TD N +S R+ I
Sbjct: 144 DAMPSDKAFTIIEKVAGIVKRF-DNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVRM 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
L GV+ R SV G+ PI N + VGR N+R+ + I ++++
Sbjct: 203 LAMDGVNPARLASV-GYGEFQPIAPNTSTVGRAKNRRVVLVISRNLDVRR 251
>gi|83949920|ref|ZP_00958653.1| flagellar motor protein [Roseovarius nubinhibens ISM]
gi|83837819|gb|EAP77115.1| flagellar motor protein [Roseovarius nubinhibens ISM]
Length = 627
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 62/185 (33%), Gaps = 14/185 (7%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
++ + ++++ K+ + + + + L V GD
Sbjct: 445 VALARLAAEEKRRRELQEEKAKLLEAQKQDLEKYRSEFFGRLRDVL-GAQDGVRIEGDRF 503
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDSIGT--- 122
+ L + + +A IL K VI + HTD +
Sbjct: 504 VFS-SEVLFAPGRAALSTEGRGEVAKVAEILRKVAGDIPPELDWVIRVDGHTDDVPIVNS 562
Query: 123 --LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+N +SQ RA + Y+I+ +S GF P+ D+ R N+RIE+
Sbjct: 563 AEFADNWELSQARALSVVRYMIESLGIPPDRLSANGFGQYQPVAQGDSAEARAQNRRIEL 622
Query: 181 QIFPR 185
+ +
Sbjct: 623 KFTEK 627
>gi|126725798|ref|ZP_01741640.1| hypothetical protein RB2150_06318 [Rhodobacterales bacterium
HTCC2150]
gi|126705002|gb|EBA04093.1| hypothetical protein RB2150_06318 [Rhodobacterales bacterium
HTCC2150]
Length = 1017
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 66/180 (36%), Gaps = 17/180 (9%)
Query: 21 ASREKKKVFLHKSNDT---DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
+ E+KK+ ++ + + K+ S + + L V +GD
Sbjct: 840 TASEQKKIAKLEAAEVKRLEEEAKKLESFKSDFFGQLRQVLAGRE-GVKIVGDRFVFS-S 897
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNK-------FPSTVIAIQSHTDSI-----GTLKN 125
+ L + +A IL VI + HTD++ G N
Sbjct: 898 EVLFPPGGAELSPAGEAEVAKVADILQDVIDKIPANIDWVIRVDGHTDNVAFNGLGKYSN 957
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +SQ RA + +++ +S GF PI+ DT R N+RIE+++ +
Sbjct: 958 NWELSQGRALSVVQFMVSSFGLPPDRLSANGFGEYQPINLADTPEARAQNRRIELKLTEK 1017
>gi|93005425|ref|YP_579862.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
gi|92393103|gb|ABE74378.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
Length = 194
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 62/184 (33%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHK----SNDTDIVNKRFGSSLDKAEDEFQM 56
+++ + + T+S C A K+ + + D + LD+ + +
Sbjct: 4 LLRNTLVVLVSALTLSACQTADFSKQTSQTINMPTVAVNLDSDGDGVPNKLDQCPNTPEN 63
Query: 57 QLQDTGIVVSRI--GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ D + G+ + ++ ++ L + V+ I+
Sbjct: 64 VVVDDRGCPHSLLFGENEFMMEARAYYDENSSEIKSEYYEQLDNAGKKMQDHLDAVMHIE 123
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
H N +S+ R + IK+Y+ I + + PI TND +
Sbjct: 124 GHISKREDNNANQTLSRYRVEEIKNYMTMTYNIDPDRIKTIYYGSERPIATNDAENSW-L 182
Query: 175 NQRI 178
NQRI
Sbjct: 183 NQRI 186
>gi|126737253|ref|ZP_01752988.1| OmpA family protein [Roseobacter sp. SK209-2-6]
gi|126721838|gb|EBA18541.1| OmpA family protein [Roseobacter sp. SK209-2-6]
Length = 210
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 66/181 (36%), Gaps = 23/181 (12%)
Query: 1 MIKELGLS-MFIMTTISGCGLASREK---KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M+K L + + +++ C + ++F +N+ V S + F
Sbjct: 2 MMKRTTLLGLGLAFSLTACTHREAGEPLGDEIFGKAANENSAVMSGDLSFAIQLAKRFAK 61
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
++ T L+ L A + +FP + H
Sbjct: 62 EVPST-----------------ITFDFDSAQLDATARAALDRQAHWIKQFPEVRFRVYGH 104
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS+G+ N + + RA +YL+++G+S +R ++ F P+ T + N+
Sbjct: 105 TDSVGSDAYNKRLGRRRAQAAVNYLVRQGISRHRLEALVSFGETRPVIV--TAHRERRNR 162
Query: 177 R 177
R
Sbjct: 163 R 163
>gi|110598823|ref|ZP_01387080.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
gi|110339554|gb|EAT58072.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
Length = 155
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + L + L A + + + ++ H D GT + NL + + RA+
Sbjct: 49 LGDVFYDFDKSALRSDAVSQLNTNADWMKANRAKSVVVEGHCDERGTNEYNLALGERRAN 108
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
K Y++ GV ++R +V F + P T+ N+R
Sbjct: 109 AAKDYIVNLGVDASRLKTVS-FGEEKPFAAGSTEEAWAQNRRAHFV 153
>gi|119384145|ref|YP_915201.1| hypothetical protein Pden_1404 [Paracoccus denitrificans PD1222]
gi|119373912|gb|ABL69505.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
Length = 463
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 16/180 (8%)
Query: 20 LASREKKKVFLHKSN--DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
A E+K+ L + + K + L V +GD
Sbjct: 286 AAEEERKRRALEEEARSKAEAEAKDLARYRSEFFGRLSQILAGRE-GVRVVGDRFVFS-S 343
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDS-----IGTLKN 125
+ E L + + +A +L + +I + HTD+ G ++
Sbjct: 344 EVLFAPGEATLSPEGRTQVARVADMLKQISGDIPPEIDWMIRVDGHTDNLPLSGQGRYRD 403
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +SQ RA + Y++ ++ GFA P+ D R N+RIE+++ R
Sbjct: 404 NWELSQARALAVVRYMVDDLGFPATRLAPAGFADTRPVAQGDAPEARAQNRRIELKLTER 463
>gi|331671759|ref|ZP_08372555.1| OmpA family membrane protein [Escherichia coli TA280]
gi|331070748|gb|EGI42107.1| OmpA family membrane protein [Escherichia coli TA280]
Length = 438
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 10/186 (5%)
Query: 6 GLSMFIMTTISGCGLAS---REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
G+++ +M T+ G + + ++ + + ++
Sbjct: 254 GITLLMMLTLFGLYSHRMNLATETVQQRIDAIGKNLPPPPVPVHKLRLKILLANEIARGL 313
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V F + + P++ A + + + + HTDS
Sbjct: 314 LTVEEDDHHSRVIFRGDTMFIPGQKTVNDALRPVIDKAAREIARVGGA-VTVTGHTDSQP 372
Query: 122 TLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+N ++S++RA + S L+ G I V G P+ N TK GR N+R
Sbjct: 373 IHSAEFPSNQVLSEKRAAEVAS-LLTSGGIPASRIRVVGKGDTVPVADNRTKTGRAQNRR 431
Query: 178 IEIQIF 183
+EI +
Sbjct: 432 VEILVV 437
>gi|218887954|ref|YP_002437275.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758908|gb|ACL09807.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 248
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 7/123 (5%)
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT-----DS 119
S IT +P V F + + +LQ + + + P I ++ T S
Sbjct: 117 SSEDGKITLNMPAGVLFEPGSDTITAEGRKLLQHMYDLFVRHPDQDINVRGFTDSSPTPS 176
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G ++N +S RA + L+ + I+ G A P+ N T+ R N+R+E
Sbjct: 177 GGRFRDNWDLSSSRAINVLRTLLD-MGIAPHRITATGLADMNPLFPNTTEENRARNRRVE 235
Query: 180 IQI 182
+
Sbjct: 236 FVL 238
>gi|167623118|ref|YP_001673412.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167353140|gb|ABZ75753.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 199
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 69/198 (34%), Gaps = 17/198 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKK---------KVFLHKSNDTDIVNKRFGSSLDKAED 52
+ +L L + I +S A + K + +V+ E
Sbjct: 1 MTKLTLVLIITILLSAALGAQPWQDSDLDGVPDLKDACAATPPNTVVDANGCEKALANER 60
Query: 53 EFQMQLQDTGIVVSRIGDM-------ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
+ T + R + + L++IA L
Sbjct: 61 GLTPSIAITPDLCLRTNGGKRYPAVCTKLSSIAVKFEFARADVLLSQAQTLEVIARWLKS 120
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
++ + HTDS+G+ NL +S ERA+ +K+ L+++ V G PI
Sbjct: 121 TGGDLLLV-GHTDSVGSPAYNLQLSFERAEQVKNVLVEQFGLLASRFQVVGVGSAEPIAD 179
Query: 166 NDTKVGRQNNQRIEIQIF 183
N T+ GR+ N+R+E +
Sbjct: 180 NRTRQGREQNRRVEFLVI 197
>gi|153868783|ref|ZP_01998526.1| outer membrane OmpA family protein [Beggiatoa sp. PS]
gi|152074626|gb|EDN71462.1| outer membrane OmpA family protein [Beggiatoa sp. PS]
Length = 533
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 11/166 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
++ + T + + G+++ + + + + + V
Sbjct: 85 ANTKEWVQEQKPSQIPQTQVAIQVIGNNIGDDNEYLPPLPSEPTVTTRK--------LTV 136
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTV---IAIQSHTDSIGTLKNNLLISQERAD 135
+ L+ LQ L S + ++ HTDS GT +NN+ +S+ RA
Sbjct: 137 DQFDTNSAELKPFHKSQLQQWEQGLTSSKSLTPPSVRVEGHTDSRGTDENNMTLSERRAT 196
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+K +L++ +S+ + + + +T+ GR N+R+EI
Sbjct: 197 SVKKHLVEELGASSDRFDIIPYGESQLTASEETEEGRALNRRVEIV 242
>gi|332521842|ref|ZP_08398291.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332042514|gb|EGI78716.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 282
Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 7/134 (5%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L D I ++ ++ + + F + + +L +AT++N P+ ++ H
Sbjct: 131 LNDEDIEINVEKSVVFISLSDKLLFKSGSYNITSRAKEILAKVATVINGKPNFEAMVEGH 190
Query: 117 TDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
TD++ ++N +S +R+ I L + GV + I+ G P+ +NDT
Sbjct: 191 TDNVPYNRGGVLQDNWDLSVKRSTSIVRALQELGVKPEQLIAA-GRGDHLPLVSNDTAEN 249
Query: 172 RQNNQRIEIQIFPR 185
R N+R +I I P+
Sbjct: 250 RAINRRTKIYILPK 263
>gi|325294743|ref|YP_004281257.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065191|gb|ADY73198.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 233
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 11/139 (7%)
Query: 52 DEFQMQLQDTGI--VVSRIGDMITCYIPVHVSFVSEVFLEK--KFLPMLQLIATILNKFP 107
E L+ G+ +++ G I I F + + +P++ + L +
Sbjct: 94 QEIHQMLKKMGVKSEIAKYGTSIRLRINTDKLFPPGSE-KPYKETIPLIMEMCKKLKEL- 151
Query: 108 STVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
I I+ HTD++ N +S RA + I + R +S G PI
Sbjct: 152 ELPITIEGHTDNVPIRSKIFPSNWELSAARAVSVLRLFI-QCGYDPRKLSAAGCGPYRPI 210
Query: 164 DTNDTKVGRQNNQRIEIQI 182
N T GR N+RIEI I
Sbjct: 211 APNTTPEGRAKNRRIEIVI 229
>gi|290954085|ref|ZP_06558706.1| ompA family protein [Francisella tularensis subsp. holarctica
URFT1]
gi|295312516|ref|ZP_06803280.1| ompA family protein [Francisella tularensis subsp. holarctica
URFT1]
Length = 363
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 24/196 (12%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K +L L ++TT+S C + K +L+ E
Sbjct: 1 MKKLLKLCLMTSLLTTLSACQTLDDKDKD-----------SGPLTFPTLEPCTAELLQSN 49
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-- 116
Q V + G + L + +L + L +T I+ +
Sbjct: 50 QSFICVKEQTGPDLIET--NIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAG 107
Query: 117 -------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
TD N+ +S+ RA ++ YL+ +G+ S+ I+++ Y+ PI ND+
Sbjct: 108 KVESKILTDQKILTDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDST 167
Query: 170 VGRQNNQRIEIQIFPR 185
R NQR+EI + R
Sbjct: 168 SSRAINQRVEITLKSR 183
>gi|229175219|ref|ZP_04302735.1| OmpA/MotB domain protein [Bacillus cereus MM3]
gi|228608355|gb|EEK65661.1| OmpA/MotB domain protein [Bacillus cereus MM3]
Length = 234
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 6/175 (3%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S E+ K + K + + + +
Sbjct: 55 LSA-SSLEAEQAKKQEEAREKEKKEMDELKALQKKIDQYINEKQLSSSFQTKLTEKGLMV 113
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++++L I + HTD++ +N +
Sbjct: 114 TILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWEL 173
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 174 STQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 228
>gi|117923780|ref|YP_864397.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1]
gi|117607536|gb|ABK42991.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1]
Length = 203
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 68/202 (33%), Gaps = 23/202 (11%)
Query: 2 IKELGL---SMFIMTTISGCGLASREKKKVFLHKSNDTD-IVNKRFGSSLDKAEDEFQMQ 57
+K GL + + ++GCG ++K + G +L + E +
Sbjct: 1 MKRTGLFITATLLTVILTGCGGVPKDKPGDLRQEQMQDQYKGTTDEGQALTRPEGMAEEI 60
Query: 58 LQDTGIVVSR------------------IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
G+ S+ D + + L + +L
Sbjct: 61 GGGAGMDGSQYKSGSYYDEQSAAGSAGGTQDPMGQPENMIFFGYDSEALTYEAQTVLAQH 120
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A + K ++I+ H D GT + NL + Q+RAD +K+ + + +
Sbjct: 121 AVAIIKGGVQSVSIEGHCDERGTREYNLALGQKRADSVKN-FLNAQGVPTTVMRTVSYGK 179
Query: 160 KYPIDTNDTKVGRQNNQRIEIQ 181
+ P+ T T+ N+R +
Sbjct: 180 ERPLYTGHTETSWARNRRAVLV 201
>gi|262194690|ref|YP_003265899.1| cysteine-rich repeat protein [Haliangium ochraceum DSM 14365]
gi|262078037|gb|ACY14006.1| cysteine-rich repeat protein [Haliangium ochraceum DSM 14365]
Length = 1793
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + ++++ P L + L P+ + I+ HT S G+ + N +S R
Sbjct: 1676 FQVGKILFEFNSGVIKEESFPELDSVVRKLQSNPAVHLLIEGHTSSEGSARYNRRLSGVR 1735
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKY-PIDTNDTKVGRQNNQRIEIQIF 183
A + + ++ +G I +DT+ R+ N+R+E I
Sbjct: 1736 AASV-RKYLVEHGVEANRLASKGVGEAQLLIAPDDTEEARETNRRVEFTIT 1785
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 67/180 (37%), Gaps = 13/180 (7%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-SLDKAEDEFQMQLQDTGIVVSRI 68
+ ++ + +V + D V + + E ++ T +
Sbjct: 1497 AVAAFLA---SKGVDLGQVSVLGRGDAASVGADDAATYPVRFERRCPSEIPPTTLCKELE 1553
Query: 69 -GDMITCYIPVHVSFVSEVFLEKKFLPMLQL-IATILNKFPSTVIAIQSHTDSIGTLKNN 126
GD ++ L+ ML+ + IL P + +Q HT G L N
Sbjct: 1554 IGDDFKIA-----YELNSANLQAASKEMLERDVLWILRAHPQIRVEVQGHTSGEGKLAYN 1608
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQRIEIQIFPR 185
+ +SQ RA + +L++ +S G K P+ +++ R+ N+RIE I PR
Sbjct: 1609 MELSQRRAQSVVDFLVE-HGIEGERLSAVGHGPKVPLVTPENSEADRERNRRIEFSIQPR 1667
>gi|322834544|ref|YP_004214571.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
gi|321169745|gb|ADW75444.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
Length = 165
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 57/180 (31%), Gaps = 27/180 (15%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + ++ C E LQ G
Sbjct: 12 QFAAMGLCILLLAACQTKPA-------------------------GLTPEQIAVLQKNGF 46
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ G + + ++ L + ++ +A+ L + + HTD+ G
Sbjct: 47 SQTAEGWELGLDAK-VLFGNNQATLSTESKQSVEKLASELLHVGLNKVNLDGHTDNYGDA 105
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S RA+ + + G+ I RG P+ +N T+ GR N+R+ + I
Sbjct: 106 GYNNDLSLRRANTVAAAFADAGMPRAN-IHTRGLGQSQPVASNKTQAGRAQNRRVSVIIV 164
>gi|313675340|ref|YP_004053336.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312942038|gb|ADR21228.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 745
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 7/131 (5%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L I V + I + + + K L I ++ P VI + SHT
Sbjct: 615 LALDKIEVGADIGKL-IDIQPIYFDLGKSEIRKDAAKELDKIVEVMKANPKMVIELGSHT 673
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-----NDTKVGR 172
D+ G+ NL +S +RA +Y++ +G+ +R IS +G+ I+ N ++
Sbjct: 674 DARGSDAFNLRLSDKRAKASAAYIVSQGIDEDR-ISGKGYGETQLINDCGNGVNCSEEEH 732
Query: 173 QNNQRIEIQIF 183
Q N+R E ++
Sbjct: 733 QLNRRTEFKVL 743
>gi|167838594|ref|ZP_02465453.1| hypothetical protein Bpse38_18947 [Burkholderia thailandensis
MSMB43]
Length = 391
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 57/167 (34%), Gaps = 12/167 (7%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
++ ++++ + + ++ + V +
Sbjct: 230 SADVQQRIAAIARMTPPAAPAEL-----RLKALLADEIAAGTVSVDEDARHSSVTFRGDA 284
Query: 81 SFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI----SQERAD 135
F + P+++ IA + K P + + +TD+ S+ERA
Sbjct: 285 MFPPGAAGVNATMGPLVKKIAAEIAKVPG-KVIVLGYTDNQPIKSRQFASNEALSEERAT 343
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L GV ++R + G PI N T GR N+R+EI +
Sbjct: 344 QVMQMLQSAGVPASR-LEALGKGDANPIGDNRTPQGRALNRRVEITV 389
>gi|227537401|ref|ZP_03967450.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227242779|gb|EEI92794.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 655
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 6/120 (5%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
T + + + + P+L + L P+ I + SHTDS T K N+
Sbjct: 535 EKGTTFILENIYYDLDKYNIRADAKPILNQLVNTLRDNPTLKIELSSHTDSRATHKYNMK 594
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
+SQ RA Y+I RG++ +R + +G+ ++ + Q N+R EI++
Sbjct: 595 LSQNRAQAAVDYIISRGIARDRIV-AKGYGETRLVNKCADGVKCSDEEHQANRRTEIKVL 653
>gi|188575566|ref|YP_001912495.1| OmpA family domain protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520018|gb|ACD57963.1| OmpA family domain protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 268
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ G++ +G+ I L + +L + +++ I HTD
Sbjct: 151 SEQGVLDQTLGNRIIE------FQSGSSRLTPLGMRILDEMVEKMSQMKDARFLIIGHTD 204
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
++G ++NL +SQ RA +K Y++Q+G+ R +V+G P+ N + GR N+RI
Sbjct: 205 NVGQRESNLALSQARAQAVKDYIVQKGIDGARM-NVQGKGPDQPVADNASPDGRARNRRI 263
Query: 179 EIQI 182
+ +I
Sbjct: 264 QFKI 267
>gi|255527289|ref|ZP_05394169.1| OmpA/MotB domain protein [Clostridium carboxidivorans P7]
gi|255509027|gb|EET85387.1| OmpA/MotB domain protein [Clostridium carboxidivorans P7]
Length = 182
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + + + F + + L I ILN+ +T + I+ HTD
Sbjct: 11 QNSVTTEVDERGLVVSLRDTLFFETGKAEVIAASQGKLVEIGKILNQLDNT-MRIEGHTD 69
Query: 119 SIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
++ +N +S RA + LI GV + SV + P+ N T+ GR
Sbjct: 70 NVPIHNEQFSDNWQLSSARALNVTELLIANGVPPKKLSSVA-YGEYRPVLDNSTEDGRAR 128
Query: 175 NQRIEIQIFPR 185
N+R++I +
Sbjct: 129 NRRVDIIVVSN 139
>gi|322379220|ref|ZP_08053611.1| Peptidoglycan-associated lipoprotein [Helicobacter suis HS1]
gi|321148360|gb|EFX42869.1| Peptidoglycan-associated lipoprotein [Helicobacter suis HS1]
Length = 181
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 23/186 (12%), Positives = 58/186 (31%), Gaps = 7/186 (3%)
Query: 2 IKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+ LS + + GC + + ++ + E +
Sbjct: 1 MKKWVLSGSVLAFVLMVGCSGQVGSTPAAQQTPPSAQQVASQPPENKTVPKEQVHEQPAP 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + + ++ A + + + ++ +TD
Sbjct: 61 QEKPKPQIESGTVV---GQVYFSFDKYDIRADMESIIDQAAQKIKE-SQMKVLLEGNTDE 116
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N ++ +RA +K LI + + I V P K + N+R++
Sbjct: 117 FGSGEYNFALANKRALSVKQALIIK-GIAQDTIRVVSLGETKPSCQEKNKTCYRKNRRVD 175
Query: 180 IQIFPR 185
I++
Sbjct: 176 IKVVEE 181
>gi|162451106|ref|YP_001613473.1| hypothetical protein sce2834 [Sorangium cellulosum 'So ce 56']
gi|161161688|emb|CAN92993.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
Length = 634
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 69/172 (40%), Gaps = 9/172 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC A R+ D +K + V G+ I
Sbjct: 468 GCPPAPRQPTDQDGDGLPD-----DADACPREKGPASGDARASGCPTRVRVQGEQIVLLE 522
Query: 77 PVHV--SFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQER 133
PV ++ K +L + ++ + P I + +HTD G + N ++ R
Sbjct: 523 PVVFRVLKNDPAPIDPKSEAVLAEVRDVIEQHPEWVKIEVSAHTDGAGNARFNETLTTAR 582
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
A+ ++ +L+ +G+++ R + +G+ PI + + GR+ N+R+++ + +
Sbjct: 583 AEAVRRWLVGKGIAAERLV-AKGYGASQPISDDRSAAGREKNRRVQLLVLEK 633
>gi|254369026|ref|ZP_04985039.1| hypothetical protein FTAG_00866 [Francisella tularensis subsp.
holarctica FSC022]
gi|157121947|gb|EDO66117.1| hypothetical protein FTAG_00866 [Francisella tularensis subsp.
holarctica FSC022]
Length = 417
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 73/196 (37%), Gaps = 24/196 (12%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K +L L ++TT+S C + K +L+ +
Sbjct: 1 MKKLLKLCLMTSLLTTLSACQTLDDKDKD-----------SGPLTFPTLEPCTAKLLQSN 49
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-- 116
Q V + G + L + +L + L +T I+ +
Sbjct: 50 QSFICVKEQTGPDLIET--NIKFDADSYTLNTQAKKVLDKLFAYLKLTDTTNFTIKGYAG 107
Query: 117 -------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
TD N+ +S+ RA ++ YL+ +G+ S+ I+++ Y+ PI ND+
Sbjct: 108 KVESKILTDQKILTDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDST 167
Query: 170 VGRQNNQRIEIQIFPR 185
R NQR+EI + R
Sbjct: 168 SSRAINQRVEITLKSR 183
>gi|86160063|ref|YP_466848.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85776574|gb|ABC83411.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 412
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 56/151 (37%), Gaps = 2/151 (1%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVSEVFLEKKFLPM 95
D D+ ++ + + + V F + L +
Sbjct: 263 DADGDGVADPDDRCPEQAGVAADGCPRAYRLLEVGRDRIALREPVRFGARDDLLPSSAVL 322
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L +A L P +A++ HTD G + +SQ RA+ + + + R
Sbjct: 323 LDELAQALRDRPRLRVAVEVHTDGAGDAAASKRLSQARAEAV-RAALAGRGIEGERVEAR 381
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
G ++PI +N T GR N+R E++I P G
Sbjct: 382 GIGAEHPIASNKTARGRAQNRRTEVRILPGG 412
>gi|83746170|ref|ZP_00943224.1| Peptidoglycan-associated lipoprotein [Ralstonia solanacearum UW551]
gi|207744075|ref|YP_002260467.1| peptidoglycan-associated lipoprotein precursor [Ralstonia
solanacearum IPO1609]
gi|83727136|gb|EAP74260.1| Peptidoglycan-associated lipoprotein [Ralstonia solanacearum UW551]
gi|206595479|emb|CAQ62406.1| peptidoglycan-associated lipoprotein precursor [Ralstonia
solanacearum IPO1609]
Length = 172
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 14/164 (8%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + + R + +D DE
Sbjct: 22 CSSGVKLDDTSKNATGGAATGADTRNVTPVDVTRDEL-------------TDPNSPLAKR 68
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ ++ +L A L + IQ +TD GT + NL + Q+RA+ +
Sbjct: 69 SVYFDFDSYTVKSEYQGLLSQHARYLQSHNQRKVLIQGNTDERGTSEYNLALGQKRAEAV 128
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ L +GV ++ +V + P T + N+R +I
Sbjct: 129 RRALSSQGVPDSQMEAVS-LGKEKPQATGHDEESWAQNRRSDIV 171
>gi|239814628|ref|YP_002943538.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
gi|239801205|gb|ACS18272.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
Length = 217
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ L+ + L + + + VI HTDSIG+ N +S RA+ +K++L+ +
Sbjct: 114 KSVLKPEGRAKLTDLVSKIRDVNLEVIIAVGHTDSIGSDAYNQRLSVRRAEAVKAFLVSK 173
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ G K P+ N TK GR N+R+EI++
Sbjct: 174 -GIERNRVYTEGKGEKQPVADNRTKEGRAKNRRVEIEVV 211
>gi|84624974|ref|YP_452346.1| putative lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|84368914|dbj|BAE70072.1| putative lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 266
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ G++ +G+ I L + +L + +++ I HTD
Sbjct: 149 SEQGVLDQTLGNRIIE------FQSGSSRLTPLGMRILDEMVEKMSQMKDARFLIIGHTD 202
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
++G ++NL +SQ RA +K Y++Q+G+ R +V+G P+ N + GR N+RI
Sbjct: 203 NVGQRESNLALSQARAQAVKDYIVQKGIDGARM-NVQGKGPDQPVADNASPDGRARNRRI 261
Query: 179 EIQI 182
+ +I
Sbjct: 262 QFKI 265
>gi|327404493|ref|YP_004345331.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320001|gb|AEA44493.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 279
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
R + + + +F L I ++N + + +TD+ G+ + N
Sbjct: 164 RDLERKNFDFKPIYFDYDKSDIRPEFESFLNRIVYVINSHTDLRVKVTGNTDADGSDQYN 223
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S+ RA+ I ++ ++ G+ +R + + K P+ N++ G+Q N+R++ +
Sbjct: 224 DGLSERRAEAIIAFFVKAGLKRDRIV-IDFKGEKNPVSDNNSDEGKQLNRRVDFEFI 279
>gi|163742880|ref|ZP_02150264.1| hypothetical protein RG210_12200 [Phaeobacter gallaeciensis 2.10]
gi|161383844|gb|EDQ08229.1| hypothetical protein RG210_12200 [Phaeobacter gallaeciensis 2.10]
Length = 655
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 54/171 (31%), Gaps = 14/171 (8%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
K ++ + + + L V GD +
Sbjct: 487 KRLEAEAEQLSSKAQDLEQYRSEFFGRLRDVL-GNQEGVRIEGDRFVF-ASEVLFSPGSA 544
Query: 87 FLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDS-----IGTLKNNLLISQERA 134
L + +A IL + +I + HTD +N +SQ RA
Sbjct: 545 DLSPAGRAEIGKVAGILQAVAAAIPPEINWIIRVDGHTDDTPLGIHPKFADNWELSQGRA 604
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ Y++Q +S GF P++ T V R N+RIE++ R
Sbjct: 605 LSVVRYMVQALGIPPERLSANGFGEYQPVNPAPTAVARAQNRRIELKFTER 655
>gi|145299366|ref|YP_001142207.1| OmpA family protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|142852138|gb|ABO90459.1| OmpA family protein [Aeromonas salmonicida subsp. salmonicida A449]
Length = 162
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 60/182 (32%), Gaps = 27/182 (14%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ GL +++ ++GC A R E L++ G
Sbjct: 8 KTGLIGLLLSVLAGCQSAPR-------------------------GLMAEQIGVLKEQGF 42
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
++ G + + L +++ + L I HTDS G
Sbjct: 43 RLTDEGWTLDFS-NRVLFANDSEALNPDTRVLVEKLGMTLLGVGLNKARIDGHTDSNGPE 101
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA + L+ + +RG + P+ N T GR N+R+ I I
Sbjct: 102 AYNDQLSLKRAKSVADVLVP-VGMQPANLDIRGRGERDPVADNKTAAGRAENRRVGIIIS 160
Query: 184 PR 185
Sbjct: 161 NE 162
>gi|86159756|ref|YP_466541.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85776267|gb|ABC83104.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 242
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 6/165 (3%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + + + + + ++ G+ + +
Sbjct: 82 CPAGQTCQGERCVAREPGSCASDRDCGAGEKCQAGRCAAAAPEASVPPECAD----VTAF 137
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L LQ +A L + P+ + +Q + D GT + N+ + RA+
Sbjct: 138 SVHFAFDRSNLTADSQQNLQKLADCLKQAPAKRVLVQGNCDERGTAQYNVALGNRRAEAA 197
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K YL GV + + + P+ + T+ N+R + QI
Sbjct: 198 KKYLTDLGV--GSTVDTVSYGEEKPVCSEATEACWAKNRRDDFQI 240
>gi|84624345|ref|YP_451717.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84368285|dbj|BAE69443.1| MotB protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 324
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 61/170 (35%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+A++ + V L ++ + + + I + R I I
Sbjct: 105 SMAAQMRMPVSLRNQTQLARAQRQMDAVEQQLSKTLAPLIDKKLITIRRNDLWIEVEINS 164
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L L +A++L + P+ + ++ +TD+ +N +S R
Sbjct: 165 DILFGTGSAALAGNARTTLSTLASVLREAPNG-VRVEGYTDNQPIATAQFPSNWELSAAR 223
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + +++ G+ N T+ GR N+R+ + I
Sbjct: 224 AASVVHLFAD-DGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIIL 272
>gi|188992991|ref|YP_001905001.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
campestris str. B100]
gi|167734751|emb|CAP52961.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
campestris]
Length = 431
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 73 TCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + F + + +L +A L K + ++ HTD+ G N +S+
Sbjct: 316 VITLSDRILFDFDKAAIRPDAARVLDTLAAALGKVSVAQMEVRGHTDAKGGDDYNQALSE 375
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQI 182
RA+ + + L RG + + S +G+ P+ N D GRQ N+R+E+ +
Sbjct: 376 RRANAVLAALRTRGTAQS--ASAKGYGESQPLAPNTVKGQDNPGGRQLNRRVELFL 429
>gi|78061495|ref|YP_371403.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77969380|gb|ABB10759.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 169
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 2/129 (1%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L+ G ++ G P + L+ +++ I L + + +
Sbjct: 43 ALKSAGFQETQQGFEFGSTGP-ILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGY 101
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+D G K +L +S+ RA+V+ L+ + I++ G P+ N T GR N+
Sbjct: 102 SDQEGVDKYDLELSRRRAEVVALELVD-VGLDTKRIAIVGKGKSDPVGDNKTPGGRAQNR 160
Query: 177 RIEIQIFPR 185
R I + PR
Sbjct: 161 RAAIVVSPR 169
>gi|325923841|ref|ZP_08185450.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
gi|325545675|gb|EGD16920.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
Length = 329
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 60/170 (35%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+A++ + V L ++ + + + I + R I I
Sbjct: 110 SMAAQMRMPVSLRNQAQLARAQRQMDAVAAQLSKTLAPLIDKKLITIRRNDLWIEVEINS 169
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L L +A++L P+ + ++ +TD+ +N +S R
Sbjct: 170 DILFGTGSAALAGTARDTLSTLASVLRDAPNG-VRVEGYTDNQPIATAQFPSNWELSAAR 228
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + +++ G+ N T+ GR N+R+ + I
Sbjct: 229 AASVVHLFAD-DGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIIL 277
>gi|163786090|ref|ZP_02180538.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
gi|159877950|gb|EDP72006.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
Length = 627
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 57/137 (41%), Gaps = 4/137 (2%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E E + IV + ++ ++ + L ++ +L K+P
Sbjct: 491 IELEIESYKDAEEIVTDDEDGNTYIELENIYFDFAKWDIKPQAARTLDILVALLKKYPRM 550
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID---TN 166
I + +HTDS + N+ +S +RA YL++ G+S R ++ +G+ P+ N
Sbjct: 551 EIQLGAHTDSRAGFEFNMDLSHKRAKATLEYLVENGISRAR-LTSKGYGETQPLVPCGDN 609
Query: 167 DTKVGRQNNQRIEIQIF 183
T+ N+R E I
Sbjct: 610 CTETEFSINRRCEFLIL 626
>gi|260596996|ref|YP_003209567.1| hypothetical protein CTU_12040 [Cronobacter turicensis z3032]
gi|260216173|emb|CBA29013.1| hypothetical protein CTU_12040 [Cronobacter turicensis z3032]
Length = 465
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 57/134 (42%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
Q I R + PV + L LQ + ++N+ P I
Sbjct: 325 QQEAQATIDRYRNVPFFSSKAPVSLFSSGSARLRPHSPTALQPLLMLVNQHPGRRFLIIG 384
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
H+D+ G+ + N +S RA ++ +L++ S V G P+ +ND+++GR+ N
Sbjct: 385 HSDNTGSPEVNRQLSVSRAIAVREWLVKTTRRSATQFEVYGSGASDPVASNDSEMGRELN 444
Query: 176 QRIEIQIFPRGNIK 189
+R+E P +K
Sbjct: 445 RRVEAIALPVDAMK 458
>gi|254524607|ref|ZP_05136662.1| hypothetical protein SSKA14_3746 [Stenotrophomonas sp. SKA14]
gi|219722198|gb|EED40723.1| hypothetical protein SSKA14_3746 [Stenotrophomonas sp. SKA14]
Length = 250
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 1/152 (0%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ + ++ S L A + + + T + L
Sbjct: 99 TGEVGNEALRQQVASDLSLASNTSYTVTNALKVGSQQNVLDQTLANRIIEFQSGSARLTP 158
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+ +L + + + P + I HTD++G ++NL +S RA +K+Y++ +
Sbjct: 159 FGMSILDEMVAKMAQMPDSRFLIIGHTDNVGQRESNLTLSHARALAVKNYMMSK-GIPGS 217
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ V G P+ N + GR N+RIE +I
Sbjct: 218 HMDVLGKGPDEPVADNTSNDGRARNRRIEFKI 249
>gi|171315482|ref|ZP_02904719.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171099482|gb|EDT44217.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 170
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 2/131 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
G + F L+ +++ I L + +
Sbjct: 41 QVTALKSAGFQETGQGFEFGASGPILFDFDRYNLKPDVRRIVERIGRTLKSAGINGVRVY 100
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
++D G +L +S+ RA+V+ L+ G+ R I+V G P+ N T GR
Sbjct: 101 GYSDDEGEAAYDLELSRRRAEVVAIELVDAGLDGKR-IAVVGKGKSDPVGDNRTPTGRAQ 159
Query: 175 NQRIEIQIFPR 185
N+R I + PR
Sbjct: 160 NRRAAIVVSPR 170
>gi|153006367|ref|YP_001380692.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152029940|gb|ABS27708.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 307
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 8/168 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-S 84
K + D+ +++ + +++ + +S+ I + + F
Sbjct: 101 KDELSQDVQQKEQEIAALRGEFDELQEKMKAEIEKGNVRLSQEKGRIKVDMVDEILFDVG 160
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN-------NLLISQERADVI 137
+ + + +L + +L + I + HTD + K N +S RA +
Sbjct: 161 DSSISAQGAEVLSRVGAVLARMSDKHIQVSGHTDDLPISKRLVERFPTNWELSAARAITV 220
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+L +R R + + PI T T R N+RIEI + P
Sbjct: 221 VRFLEERAGVPGRRLVGAAHSQYDPISTGKTAKERARNRRIEILLTPE 268
>gi|300772840|ref|ZP_07082709.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300759011|gb|EFK55838.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 655
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 6/120 (5%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
T + + + + P+L + L P+ I + SHTDS T K N+
Sbjct: 535 EKGTTFILENIYYDLDKYNIRADAKPILNQLVNTLRDNPTLKIELSSHTDSRATHKYNMK 594
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
+SQ RA Y++ RG++ +R + +G+ ++ + Q N+R EI++
Sbjct: 595 LSQNRAQAAVDYIVSRGIARDRIV-AKGYGETRLVNKCADGVKCSDEEHQANRRTEIKVL 653
>gi|269964170|ref|ZP_06178467.1| outer membrane protein, putative [Vibrio harveyi 1DA3]
gi|269831125|gb|EEZ85287.1| outer membrane protein, putative [Vibrio harveyi 1DA3]
Length = 205
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 8/194 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L ++T+S + +K + + +
Sbjct: 1 MKNNTLIFLALSTMSLNSAFATDKFDYIPTPEHIQVADLHDVDNDGVINARDLCANTP-V 59
Query: 62 GIVVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G V G + F + +A L K+P+T I IQ +
Sbjct: 60 GAEVDNDGCETYLNKEEQYQLKILFANDSDSINPVFQRKITELAAFLKKYPATSIEIQGY 119
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+GT NL +S+ RA +++ LI++ S + +++ GF + + V N+
Sbjct: 120 ASKVGTAAYNLELSRRRASNVRNLLIKQ-GISEKRLTIVGFGDTHLVQLGTDDVSHALNR 178
Query: 177 RIEIQIFP-RGNIK 189
R+ + +G +K
Sbjct: 179 RVTATVIGHKGMVK 192
>gi|194443139|ref|YP_002039516.1| hypothetical protein SNSL254_A0308 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194401802|gb|ACF62024.1| SciP protein [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
Length = 434
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 64/186 (34%), Gaps = 10/186 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
G+++ M T+ G + + V + + + + + ++
Sbjct: 250 GIALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPPVPVHKLRLKILLANEIARGL 309
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V F + + P++ A + + + I HTDS
Sbjct: 310 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA-VTITGHTDSQP 368
Query: 122 TLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
S++RA + + L GV + R + + G P+ N +K GR N+R
Sbjct: 369 IHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGR-VHIVGKGDTVPVADNGSKAGRAKNRR 427
Query: 178 IEIQIF 183
+EI +
Sbjct: 428 VEILVV 433
>gi|322379707|ref|ZP_08054020.1| peptidoglycan-associated lipoprotein precursor [Helicobacter suis
HS5]
gi|321147856|gb|EFX42443.1| peptidoglycan-associated lipoprotein precursor [Helicobacter suis
HS5]
Length = 181
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 23/186 (12%), Positives = 58/186 (31%), Gaps = 7/186 (3%)
Query: 2 IKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+ LS + + GC + + ++ + E +
Sbjct: 1 MKKWVLSGSVLAFVLMVGCSGQVGSTPAAQQTPPSAQQVASQPPENKTVPKEQVHEQPAP 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + + ++ A + + + ++ +TD
Sbjct: 61 QEKPKPQIESGTVV---GQVYFSFDKYDIRADMESVIDQAAQKIKE-SQMKVLLEGNTDE 116
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N ++ +RA +K LI + + I V P K + N+R++
Sbjct: 117 FGSGEYNFALANKRALSVKQALIIK-GIAQDTIRVVSLGETKPSCQEKNKTCYRKNRRVD 175
Query: 180 IQIFPR 185
I++
Sbjct: 176 IKVVEE 181
>gi|188576036|ref|YP_001912965.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520488|gb|ACD58433.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 286
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 61/170 (35%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+A++ + V L ++ + + + I + R I I
Sbjct: 105 SMAAQMRMPVSLRNQTQLARAQRQMDAVEQQLSKTLAPLIDKKLITIRRNDLWIEVEINS 164
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L L +A++L + P+ + ++ +TD+ +N +S R
Sbjct: 165 DILFGTGSAALAGNARTTLSTLASVLREAPNG-VRVEGYTDNQPIATAQFPSNWELSAAR 223
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + +++ G+ N T+ GR N+R+ + I
Sbjct: 224 AASVVHLFAD-DGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIIL 272
>gi|259419273|ref|ZP_05743190.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259345495|gb|EEW57349.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 1617
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTL 123
R GD + + + + + L +L+ A L + V I+ HTD G+
Sbjct: 453 QRFGDSLRVTVE---FATGKADIREAGLGVLKQAADALKALGAENYVFLIEGHTDITGSD 509
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K NL +S RA ++ Y ++ + + G+ + P+ TN T G+Q N+R+EI+
Sbjct: 510 KVNLPLSDARAKSVEQYFVESAGIAPERLQTVGYGSRIPLATNATDRGKQTNRRVEIR-- 567
Query: 184 PRGNI 188
P GNI
Sbjct: 568 PYGNI 572
>gi|225569968|ref|ZP_03778993.1| hypothetical protein CLOHYLEM_06063 [Clostridium hylemonae DSM
15053]
gi|225161438|gb|EEG74057.1| hypothetical protein CLOHYLEM_06063 [Clostridium hylemonae DSM
15053]
Length = 255
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 70/178 (39%), Gaps = 9/178 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
++ + +N T+I K D + I +++ +V
Sbjct: 64 TMEKEGTENVPGANTTEIDQKFDEMY-DNLLKMQDASGEVADIQIAKGDGYQFITFKDNV 122
Query: 81 SFVSEVF-LEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTL-----KNNLLISQE 132
F + + L + +L ++++ I + HT + ++S
Sbjct: 123 FFDGDSYVLRDEGKSVLDTFSSVIAPASDAIKEIQVLGHTSQAEPNIPNEVMTDRVLSAT 182
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
R+ V+ +Y+ Q+ + + + G+ PIDT DT GR N+R+EI I G++++
Sbjct: 183 RSAVVVAYVQQKNIIEAKKLVSAGYGQFRPIDTFDTFEGRARNRRVEILITKTGSVEQ 240
>gi|254463240|ref|ZP_05076656.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2083]
gi|206679829|gb|EDZ44316.1| OmpA family domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 316
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 64/176 (36%), Gaps = 3/176 (1%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
+ IS ++ + V K + + +
Sbjct: 142 AALSLLISRSAASAYIQIIQISVDDAADISVFKGSEIIASTTGSGQAVTTKGAAATLDVS 201
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
G +I + + L + LQ +A L + +A+ HTD+ G+L+ N+
Sbjct: 202 GRVI---LSDLMFQTGSSNLGEGSFKSLQNLADYLRSNSTRKVALVGHTDAEGSLEGNIA 258
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ RA ++ LI+ +S G + P+ +N + GR N+R+E +
Sbjct: 259 LSKRRASSVRKRLIEAYGVPTDQLSADGVGFLSPVASNLSAAGRTANRRVEAVLIS 314
>gi|15602831|ref|NP_245903.1| hypothetical protein PM0966 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|18202558|sp|Q51886|PAL_PASMU RecName: Full=Outer membrane protein P6; Short=OMP P6; AltName:
Full=P6-like; AltName: Full=Peptidoglycan-associated
lipoprotein; Flags: Precursor
gi|841126|gb|AAA79373.1| outer membrane protein, similar to Haemophilus influenzae outer
membrane protein P6, Swiss-Prot Accession Number P10324
[Pasteurella multocida]
gi|12721291|gb|AAK03050.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 150
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 60/179 (33%), Gaps = 37/179 (20%)
Query: 2 IKELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L + + ++ CG + +++ +
Sbjct: 1 MKKLTKVLLVAGSVAVLAACGSSKKDESAGQMFG-------------------------- 34
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G V + + +E +++ +L A LN P+T + ++ +TD
Sbjct: 35 ---GYSVQDLQQR----YNTVYFGFDKYNIEGEYVQILDAHAAFLNATPATKVVVEGNTD 87
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RAD + + + +S + + P + N+R
Sbjct: 88 ERGTPEYNIALGQRRADAV-KHYLSAKGVQAGQVSTVSYGEEKPAVLGHDEAAYSKNRR 145
>gi|294139328|ref|YP_003555306.1| OmpA family protein [Shewanella violacea DSS12]
gi|293325797|dbj|BAJ00528.1| OmpA family protein [Shewanella violacea DSS12]
Length = 277
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 46/109 (42%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + + P+++++AT L P + HTD +G N ++S +R
Sbjct: 164 VALEGLLFKFDSDEMLLEATPVVEVVATYLKSHPKQSFYVIGHTDDLGKQSYNQVLSNKR 223
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A + L+ + +G P+ N G++ N+R+E+ +
Sbjct: 224 AKAVVKQLLSVYKVPKSQLEAKGIGEYSPVANNSNDAGQKLNRRVELVL 272
>gi|117919656|ref|YP_868848.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117611988|gb|ABK47442.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 191
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 62/186 (33%), Gaps = 6/186 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKK-----KVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
IK L++ + + ++ K + V + +
Sbjct: 4 IKLTCLALSLSQMLPAYAWQDTDQDGVPDIKDACPNTPANTTVMANGCVYQAEVKSSSIQ 63
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ S + + ++ L L+ L+ T + + H
Sbjct: 64 CDLNDPSTYSAADCH-NIETAIVYFEFAIAEVDLSQWKALALVKAFLDANTETRLTLVGH 122
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD +GT + N +S RA +K L++ + +V G P+ N + GR+ N+
Sbjct: 123 TDIVGTPEFNYQLSLRRAQNVKRILVEDYGFNPNRFTVVGKGISEPVADNHSSEGRRLNR 182
Query: 177 RIEIQI 182
R++ +
Sbjct: 183 RVQFIV 188
>gi|326799502|ref|YP_004317321.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326550266|gb|ADZ78651.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 647
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 10/160 (6%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI----TCYIPVHVSFVSEVFL 88
++ ++ G D A + V+ D + T + + +
Sbjct: 487 EQAYQVLGEKVGYIADSAFTNTNGLNPGDTVKVALYLDQLKQGKTFRLDNIYYDFDKFNI 546
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
K +L + I+ P+ I + SHTDS G K N+ +SQ+RA YL+ RG++
Sbjct: 547 RKDAAVILDGLVKIMKDNPTLKIELSSHTDSRGRDKYNMTLSQKRAQAAVDYLVSRGIAR 606
Query: 149 NRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
+R I +G+ ++ ++ Q N+R E +
Sbjct: 607 DRMI-AKGYGESKLLNRCANGIKCSEAEHQLNRRTEFTVL 645
>gi|108755187|emb|CAK32579.1| outer membrane protein [uncultured organism]
Length = 178
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
VS +GD I + L+ L+ A L K+P+ I ++ H D GT +
Sbjct: 63 VSEVGDRI-------FFEFDKYNLKAGARGTLEKQAAWLKKWPAVTITVEGHCDERGTRE 115
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + + RA+ +K YL+ GV+ +R ++ + + P+ + N+R
Sbjct: 116 YNLALGERRANSVKDYLVALGVNPSRIKTIS-YGKERPVALGSNESAWAQNRR 167
>gi|91794083|ref|YP_563734.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91716085|gb|ABE56011.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 373
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 61/156 (39%), Gaps = 4/156 (2%)
Query: 36 TDIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
D ++DK + ++ G V + + ++
Sbjct: 217 GDADKDGVNDNIDKCPNTPMTHKVDAKGCSVYEFVTQ-KYDLGSILFDNDSSVIKPGAYS 275
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
++++ + L K+P + I+ H ++GT NLL+S+ RA+ + + + + + I
Sbjct: 276 DVEILVSHLEKYPQHTVVIEGHASNVGTPDYNLLLSERRANAVAALVTSKYKINGSRIKS 335
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
G+ P ++ + N+RIE + G K+
Sbjct: 336 VGYGLTKPQMAGNSAEAHRLNRRIEAIVT--GTEKR 369
>gi|225012050|ref|ZP_03702487.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
gi|225003605|gb|EEG41578.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
Length = 299
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQ 114
GI S+ + + F ++ L ++ L L+ + +IL ++P+ I ++
Sbjct: 171 PDTDGDGIQDSQDDCPQIPGLIQLILFETDQDILTEEALISLEEVYSILIQYPNLNIIVE 230
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD G + N +S++ + +LI RG+SS++ S + P+ TN T GR+
Sbjct: 231 GHTDDTGGVNYNQELSEKIVATVLRFLINRGISSSKIKSAA-YGETRPLRTNSTSEGRRY 289
Query: 175 NQRIEIQI 182
N+R++ I
Sbjct: 290 NRRVQFNI 297
>gi|89111206|dbj|BAE80295.1| outer membrane protein OmpA [Acidovorax avenae subsp. avenae]
Length = 379
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + P ++ + +L + S +A+ +TD+ G +N +S+ RA + +
Sbjct: 277 FATDKTDILPDSQPQIEQVVQLLRQDTSLKLAVNGYTDNTGDAAHNKTLSEGRAKAVAAA 336
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +G+ ++R S GF P+ N T G+ N+R+E+
Sbjct: 337 VAAQGIDASRLSSA-GFGAADPVADNATDEGKAKNRRVELV 376
>gi|119471346|ref|ZP_01613818.1| hypothetical protein ATW7_16907 [Alteromonadales bacterium TW-7]
gi|119445622|gb|EAW26906.1| hypothetical protein ATW7_16907 [Alteromonadales bacterium TW-7]
Length = 1559
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 57/154 (37%), Gaps = 6/154 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQ--MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ ++ G+++ Q + + +++ + ++ +
Sbjct: 511 AALGQTTLQQIGTNIPNLAQAKQHYKTVANDYFEHLSAKEIVKDVVIEGTFSLNSEQVTD 570
Query: 91 KFLPML----QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ + + + L + S + + HT IG N+ +S+ RA+ +K L+ +
Sbjct: 571 DYRNTILQQSEAVIKALKQNESLKVTVAGHTCDIGNYDYNMALSERRAEAVKHILVTQAG 630
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
I V G Y P+ N + R N+R+ I
Sbjct: 631 IDEARIEVLGLGYAQPLINNKDEASRAQNRRVHI 664
>gi|30314436|gb|AAP15427.1| outer membrane lipoprotein precursor [Burkholderia anthina]
Length = 150
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 19/165 (11%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYI 76
C + K + T + V + D
Sbjct: 1 CKSGVKLDDKANNAGAMSTQPSADNVAQ-----------------VNVDPLNDPNSPLAK 43
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ ++ P+LQ A L P + IQ +TD GT + NL + Q+RA+
Sbjct: 44 RSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEA 103
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ + GV+ ++ +V + P T + N+R ++
Sbjct: 104 VRRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147
>gi|58582454|ref|YP_201470.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58427048|gb|AAW76085.1| MotB protein [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 286
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 61/170 (35%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+A++ + V L ++ + + + I + R I I
Sbjct: 105 SMAAQMRMPVSLRNQTQLARAQRQMDAVEQQLSKTLAPLIDKKLITIRRNDLWIEVEINS 164
Query: 79 HVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQER 133
+ F L L +A++L + P+ + ++ +TD+ +N +S R
Sbjct: 165 DILFGTGSAALAGNARTTLSTLASVLREAPNG-VRVEGYTDNQPIATAQFPSNWELSAAR 223
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + + + +++ G+ N T+ GR N+R+ + I
Sbjct: 224 AASVVHLFAD-DGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIIL 272
>gi|91218366|ref|ZP_01255310.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
700755]
gi|91183504|gb|EAS69903.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
700755]
Length = 277
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 6/133 (4%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + +S M+ I ++ F + +L IA +LN PS + ++ HT
Sbjct: 134 SGSDLNISIEETMVKINIDDNLLFGDSSFRVGSDADEILSRIAKVLNSEPSLEVLVEGHT 193
Query: 118 DSIGTLKN-----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
DS K+ N +S R+ I L + ++ + V G + P+ NDTK
Sbjct: 194 DSRTIKKDSYIIDNWDLSARRSAAIVRRLENKFGVASDQLIVAGRSSYDPLVPNDTKDNM 253
Query: 173 QNNQRIEIQIFPR 185
N+R +I I P
Sbjct: 254 AKNRRTQIVIMPN 266
>gi|30314422|gb|AAP15420.1| outer membrane lipoprotein precursor [Burkholderia multivorans]
gi|30314432|gb|AAP15425.1| outer membrane lipoprotein precursor [Burkholderia cepacia]
Length = 149
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 61 TGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + D ++ ++ P+LQ A L P + IQ +TD
Sbjct: 26 AQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDE 85
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + Q+RA+ ++ L GV+ ++ +V + P+ T + N+R +
Sbjct: 86 RGTSEYNLALGQKRAEAVRRALALLGVADSQMEAVS-LGKEKPLATGHDEASWAQNRRAD 144
Query: 180 IQ 181
+
Sbjct: 145 LV 146
>gi|229589734|ref|YP_002871853.1| hypothetical protein PFLU2242 [Pseudomonas fluorescens SBW25]
gi|229361600|emb|CAY48478.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 295
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + P ++ ++ +L + S +AI +TD G +N +S +RA + +
Sbjct: 193 FATDQTRILPDSQPQIEQLSQLLKQDASLKLAINGYTDRTGDPAHNKTLSYDRAKAVVAA 252
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +G+ + R +S GF P+ N T+ G+ N+R+E+
Sbjct: 253 ITAKGIDAAR-LSAAGFGDADPVADNVTEAGKAQNRRVELV 292
>gi|218885327|ref|YP_002434648.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756281|gb|ACL07180.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 345
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 2/142 (1%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
++LDK + + + + + ++ L+ +L A
Sbjct: 205 ANEAALDKFVRDVFYEEKAAPAAAAAAPMDEVIVLRSIQFALNSAKLDATATSILVETAA 264
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
IL + + HT S+GT + N +S+ RA +K +L+++GV S+R I+ +G+
Sbjct: 265 ILKSKKG-SVEVAGHTCSLGTDEYNQKLSEARAKSVKDFLVKQGVESSRLIT-KGYGESK 322
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
P N T+ R+ N+R+E+
Sbjct: 323 PKYDNSTEETRKLNRRVELSFI 344
>gi|224368748|ref|YP_002602909.1| MotB1 [Desulfobacterium autotrophicum HRM2]
gi|223691464|gb|ACN14747.1| MotB1 [Desulfobacterium autotrophicum HRM2]
Length = 269
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 11/154 (7%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKK 91
D + + + E + + + VS + + + F E L +K
Sbjct: 102 DELGGMVEKEIREIASEVREMILFNKLGGLVNVSESETGVVITMSDLLLFSAGEAILSEK 161
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVS 147
+L + +L + + + ++ HTD S G +N +S RA + L+
Sbjct: 162 GADILNKVTAVLAQL-AYHVKVKGHTDASPISTGRYPSNWELSASRAAAVVK-LLVASGL 219
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
IS G+A P+ TNDT+ GR N+R+EI
Sbjct: 220 DPSLISAEGYAQYRPVATNDTEKGRARNRRVEIV 253
>gi|323435973|ref|ZP_01049351.2| OmpA family protein [Dokdonia donghaensis MED134]
gi|321496288|gb|EAQ39323.2| OmpA family protein [Dokdonia donghaensis MED134]
Length = 547
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 3/131 (2%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L+ T + + + I + + +++ L + L P IAI +HT
Sbjct: 418 LEATPAPIVKTTEKTIIKIDNILFDLDSAKIKEISTITLNTVVATLKANPELKIAINAHT 477
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND--TKVGRQNN 175
D+ G+ N +S RA YL+ + S +S +GF + + T + N
Sbjct: 478 DAQGSASYNKRLSMRRAASAMEYLLSK-GISKDRLSSQGFGEEQLLINCTSCTPQENELN 536
Query: 176 QRIEIQIFPRG 186
+RIE + +
Sbjct: 537 RRIEFVVISKE 547
>gi|255037333|ref|YP_003087954.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254950089|gb|ACT94789.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 366
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I+ S+ L + L +A + + + + I HTD++G NL +S
Sbjct: 248 GISASDKTLYFPRSDYKLPMQSRTYLDSVAMYILENKNKGLRITGHTDNVGNPSLNLTLS 307
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ R VI YLI + I+ G ++P+ ND++ R+ N+R+E+QI
Sbjct: 308 EYRVRVISRYLIGK-GVPEGVIAAVGVGSRFPVRPNDSEENRRMNRRVEVQII 359
>gi|110638992|ref|YP_679201.1| outer membrane peptidoglycan-associated protein [Cytophaga
hutchinsonii ATCC 33406]
gi|110281673|gb|ABG59859.1| outer membrane peptidoglycan-associated protein [Cytophaga
hutchinsonii ATCC 33406]
Length = 710
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 8/133 (6%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI-ATILNKFPSTVIAIQS 115
++++ V+ + + ++ L + + I L + P+ I I S
Sbjct: 577 SMKNSEPVIETPVEGKAFVLKDIQYETNQTDLNDEAKAAIDNILIPFLKEHPTDKIIISS 636
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTK 169
HTD +G+ K N +S +RA + YLIQ+ S + I +G+ PI +N + +
Sbjct: 637 HTDDVGSHKYNENLSDQRALKVMQYLIQK-GISAKQIQAKGYGETKPIASNINPDGSENE 695
Query: 170 VGRQNNQRIEIQI 182
+GR N+R E I
Sbjct: 696 IGRSINRRTEFLI 708
>gi|332292539|ref|YP_004431148.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332170625|gb|AEE19880.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 652
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 63/146 (43%), Gaps = 7/146 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ + + + +++L+ T + V + + ++ + L + + +
Sbjct: 509 AEPETLQKDIELELRLTEVGVGDDLAKL-LNLNPIYFDYNKSDIRPDAALELTKVISAMK 567
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ P VI+++SHTDS G NL +S RA +Y+I R IS +G+ ++
Sbjct: 568 QVPDMVISVRSHTDSRGKDDYNLSLSDRRAKSTVAYIISR-GIDANRISGQGYGETQLVN 626
Query: 165 TND-----TKVGRQNNQRIEIQIFPR 185
+ + T+ Q N+R E + +
Sbjct: 627 SCNNNADCTEEQHQLNRRSEFIVITQ 652
>gi|318079837|ref|ZP_07987169.1| secreted protein [Streptomyces sp. SA3_actF]
Length = 166
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 55/161 (34%), Gaps = 3/161 (1%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ D LD L D+
Sbjct: 3 TSPPPDVDSSSPGLRLADGAQLASAKVLD--IKSVVEDLGGEERREDTNTDVKFALQAEV 60
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L+ ++ I K + + + TD++G+ + +S+ RAD++
Sbjct: 61 LFDKDKFALDPSGRARIKAIGEEAKKQRARTVRVFGFTDNLGSYAHGKTLSKRRADIVHD 120
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
L Q VRG++ YPI N T+ GR+ N+R+E+
Sbjct: 121 ELAQYLGPEV-TFEVRGYSEDYPIADNTTEEGRRKNRRVEV 160
>gi|319791244|ref|YP_004152884.1| type IV / vi secretion system protein, dotu family [Variovorax
paradoxus EPS]
gi|315593707|gb|ADU34773.1| type IV / VI secretion system protein, DotU family [Variovorax
paradoxus EPS]
Length = 454
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 44/140 (31%), Gaps = 4/140 (2%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ + +++ + V+ D + F LP+L+ I L +
Sbjct: 293 RLARFLEPEVKQGLVTVTDEADRSVVRLRGDSFFGSGSAEPMAASLPVLRRIGQALAEVK 352
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKS--YLIQRGVSSNRFISVRGFAYKYPIDT 165
+ I H+D+ + + + + G A P+
Sbjct: 353 G-DVLITGHSDNQPIRSLRYPSNWHLSAARADAVKGALTTLVDPARMRSDGKADAEPVAA 411
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
NDT R N+R++I +
Sbjct: 412 NDTPANRARNRRVDIVLLTE 431
>gi|166711089|ref|ZP_02242296.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 264
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ G++ +G+ I L + +L + +++ I HTD
Sbjct: 147 SEQGVLDQTLGNRIIE------FQSGSSRLTPLGMRILDEMVEKMSQMKDARFLIIGHTD 200
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
++G ++NL +SQ RA +K Y++Q+G+ R +V+G P+ N + GR N+RI
Sbjct: 201 NVGQRESNLALSQARAQAVKDYIVQKGIDGARM-NVQGKGPDQPVADNASPDGRARNRRI 259
Query: 179 EIQI 182
+ +I
Sbjct: 260 QFKI 263
>gi|163760609|ref|ZP_02167690.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
gi|162282224|gb|EDQ32514.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
Length = 588
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ ++ L IA + + I HTD+ G N +S
Sbjct: 476 NQLLAANTIRFDTGQAGIQHHSFGFLDRIAFAARQCRDVRLEISGHTDADGDEGANQTLS 535
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ RA+ + +Y++ GV +R +++ G+ P+ N+T G+ N+RIEI++
Sbjct: 536 ERRAEAVVAYMVAAGVGPDRVVAI-GYGESRPVADNETDTGKAANRRIEIRVVN 588
>gi|157367360|gb|ABV45540.1| outer membrane protein 18 [Helicobacter pylori]
Length = 179
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 56/180 (31%), Gaps = 7/180 (3%)
Query: 1 MIKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + + +GC K + + +K E + +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPA-- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 59 --PVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T+ + N+R E
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCAQKTRECYKENRRDE 174
>gi|126739844|ref|ZP_01755535.1| hypothetical protein RSK20926_14189 [Roseobacter sp. SK209-2-6]
gi|126719076|gb|EBA15787.1| hypothetical protein RSK20926_14189 [Roseobacter sp. SK209-2-6]
Length = 791
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 14/158 (8%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ + + L V GD + L + +
Sbjct: 636 AQDLERYRSEFFGRLRDVL-GKQEGVRIEGDRFVF-ASEVLFPPGSADLSAAGQAEIGKV 693
Query: 100 ATILN----KFP---STVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVS 147
A IL + P + +I + HTD+ +N +SQ RA + Y+I+
Sbjct: 694 AQILQSVVVEIPAEINWIIRVDGHTDNTTMLGHPKYSDNWELSQGRALSVVRYMIENLGI 753
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ GF P+++ DT R N+RIE++ R
Sbjct: 754 PPGRLAANGFGEFQPVNSADTPEARAQNRRIELKFTER 791
>gi|115526883|ref|YP_783794.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115520830|gb|ABJ08814.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 465
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 1/163 (0%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S + + + K E + V +
Sbjct: 304 SGDAFYDEAVGQIRVGLSKELPQGWQSKVEVSVKPAAAPVDSTVCQQLFSDLLAKGKIRF 363
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ ++ L +L + + S VI I HTD G N +S+ RA + Y+
Sbjct: 364 ESGKATIDGDSLGLLDRLIETAMRCSSAVIEIAGHTDGDGEAAANKALSERRAQAVVDYM 423
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++ G+ ++RF V GF P+ +ND G+ N+RIE + P
Sbjct: 424 VKAGLPADRFHPV-GFGSAQPVASNDNDEGKAQNRRIEFTVRP 465
>gi|300716419|ref|YP_003741222.1| type IV / VI secretion system family protein, DotU [Erwinia
billingiae Eb661]
gi|299062255|emb|CAX59372.1| Type IV / VI secretion system family protein, DotU [Erwinia
billingiae Eb661]
Length = 408
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 4/153 (2%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLI 99
++ + D + V+ + + L ++ +
Sbjct: 247 SNSTQAMLDLRTRLDDLIVDRTLDVADGANGSKVIIAADKLFNRGGSDLTPAGRAIMVRV 306
Query: 100 ATILNKFPST---VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
A ++ T + + +N S +A + S L Q + I G
Sbjct: 307 AAAMDNIKGTLQVSVYTDNQPQRTARFPSNYEYSLAQAHTLTSLLQQLMIQPGHMIRGEG 366
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P+ ND++ R N+R+EI +FP ++
Sbjct: 367 RGDSNPLLPNDSQENRAQNRRVEILLFPAPEVQ 399
>gi|115375600|ref|ZP_01462857.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|310823151|ref|YP_003955509.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|115367376|gb|EAU66354.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|309396223|gb|ADO73682.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
Length = 249
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+E L + L +A + I +Q H D GT + NL +S RA +K Y
Sbjct: 150 FGFNEASLSSEAQSRLSALADCIKASSG-RITLQGHADERGTEEYNLQLSNSRASAVKRY 208
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L GV +NR ++ G+ P+++ + N+R+E Q
Sbjct: 209 LTTLGVPANR-LATVGYGETRPLNSASDEEAWAQNRRVEFQ 248
>gi|74095537|emb|CAJ27303.1| conserved hypothetical protein [Cronobacter sakazakii]
Length = 536
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 54/134 (40%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ I R + PV + L LQ + T++N+ P I
Sbjct: 396 QEEAQAVIGRYRNLPYFSSQAPVSLFSSGSARLRPHGPAALQPLFTLVNQHPENRFLIIG 455
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
H+D+ G + N +S RA ++ +L++ + G P+ ND + GR+ N
Sbjct: 456 HSDNTGNPEVNQQLSVSRAIAVREWLVKTTKRPATQFDIYGLGASEPVAGNDNETGRELN 515
Query: 176 QRIEIQIFPRGNIK 189
+R+E P +++
Sbjct: 516 RRVEAIALPADSME 529
>gi|238757108|ref|ZP_04618295.1| Type VI secretion system OmpA/MotB family protein [Yersinia aldovae
ATCC 35236]
gi|238704486|gb|EEP97016.1| Type VI secretion system OmpA/MotB family protein [Yersinia aldovae
ATCC 35236]
Length = 438
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 59/155 (38%), Gaps = 7/155 (4%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKK 91
+ ++ + + + ++ + V F + +
Sbjct: 284 ALQRPVIAPPVAAQKLRLTILLKDEIAKQLVSVDETTSRSKVIFKGDTMFQVGSDKVRPE 343
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVS 147
+ +++ +A +++ + I HTDS+ K N ++S++RA + ++ ++
Sbjct: 344 IMSVIERVAQEVHRVQGA-VLIIGHTDSMPINKPGFPNNQVLSEKRAANVARFM-EKAGI 401
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I G P+ +ND GR N+R+EI +
Sbjct: 402 PTDKIRFEGKGDAQPVSSNDDAAGRSQNRRVEIFV 436
>gi|86130725|ref|ZP_01049325.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85819400|gb|EAQ40559.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 649
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 9/145 (6%)
Query: 50 AEDEFQMQLQ-DTGIVVSRIGDMI--TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
E Q LQ + + +++ GD I + + ++ L + + +
Sbjct: 506 LSGEIQEFLQLERAVQIAKPGDDIAKILNLNPIYFDFDKYYIRPDAEIELAKVLVYMETY 565
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
PS I ++SHTDS G + N +SQ R + +LI +G++ +R +S RG+ ++
Sbjct: 566 PSVRIDVRSHTDSRGNDEYNRTLSQNRNVSTRDWLIAKGINPSR-LSGRGYGESQLVNEC 624
Query: 167 D-----TKVGRQNNQRIEIQIFPRG 186
++ Q N+R E +
Sbjct: 625 SNGVQCSEEQHQLNRRSEFIVLSNN 649
>gi|167741000|ref|ZP_02413774.1| hypothetical protein Bpse14_23241 [Burkholderia pseudomallei 14]
Length = 433
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V + E + + P+L +A + + +
Sbjct: 300 LKNEIARGLLTVDEDDRRSVVVFRGDSMFRSGESRVLSEIEPVLDKVAREVARVGG-RVT 358
Query: 113 IQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ H+D+ + NNL++S++RA + L+QRG ++R I G P+ N T
Sbjct: 359 VTGHSDNQPIRRADIPNNLVLSEKRAAYVAQILVQRGTPADR-IRSEGRGDAQPVAENAT 417
Query: 169 KVGRQNNQRIEIQIF 183
GR N+R+EI +
Sbjct: 418 PAGRSRNRRVEIAVT 432
>gi|146283137|ref|YP_001173290.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas stutzeri
A1501]
gi|145571342|gb|ABP80448.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas stutzeri
A1501]
gi|327481490|gb|AEA84800.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas stutzeri DSM
4166]
Length = 167
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 55/165 (33%), Gaps = 19/165 (11%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + + G+ I S + I
Sbjct: 21 GCSSKGGDDSGEGSGAIDPNAGYGADSGA-----------------IDGSMSEEAALRAI 63
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + ++ HTD GT + N+ + + R+
Sbjct: 64 TTFYFEYDSSDLKPEAMRALDVHAKDLKGN-GARVVLEGHTDERGTREYNMALGERRSKA 122
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+ + S + + + + P+ + + N+R+E++
Sbjct: 123 VQRYLVLQ-GVSPAQLELVSYGEERPVAMGNDEQSWAQNRRVELR 166
>gi|92116250|ref|YP_575979.1| OmpA/MotB [Nitrobacter hamburgensis X14]
gi|91799144|gb|ABE61519.1| OmpA/MotB [Nitrobacter hamburgensis X14]
Length = 463
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
L+ + +L + + P+ I I HTDS G N +S+
Sbjct: 353 LLGKRTIQFETGRATLDPDSIGLLDRLTETALRCPTATIEIAGHTDSDGDASFNQTLSER 412
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + YL++ G+ ++R G+ PI NDT G+ N+RI+ +
Sbjct: 413 RAQAVVDYLVKAGMPADR-FKPMGYGSVQPIAANDTDEGKAKNRRIDFTV 461
>gi|330447990|ref|ZP_08311638.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492181|dbj|GAA06135.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 196
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 79/193 (40%), Gaps = 11/193 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + ++ + ++ GC L ++ K+ + A+ + +
Sbjct: 1 MKYV-ITGLLALSLFGCSLTVQQPPVAKQTKNLYDQDSDGVINQRDRCADTPIDAVVDND 59
Query: 62 GIVV---SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G + + I + + + ++ + ++ L K+P T I ++ +
Sbjct: 60 GCPTFVKNSEENNIHV-----LFANDSSEIPESYMENIANMSAFLAKYPDTHIELKGYAS 114
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+G+ N+ +S+ RA I+ LI GVS R +V GF P+ +D + ++R+
Sbjct: 115 PVGSAAYNVALSKRRAQAIRQALITEGVSPARIKTV-GFGDSDPVKADDVEESNALSRRV 173
Query: 179 EIQIF-PRGNIKK 190
Q+ +GN+ K
Sbjct: 174 VAQVVGSQGNVVK 186
>gi|311069471|ref|YP_003974394.1| flagellar motor protein MotS [Bacillus atrophaeus 1942]
gi|310869988|gb|ADP33463.1| flagellar motor protein MotS [Bacillus atrophaeus 1942]
Length = 209
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 69/201 (34%), Gaps = 24/201 (11%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFL--------------HKSNDTDIVNKRFGSSLDKA 50
+ L + + +K K + N +D K+ + D+
Sbjct: 2 VTLILVFFILLFSMSQIDVQKFKSAVESIQKEGSGIQPDNTSINTSDAAQKKQDNRQDEL 61
Query: 51 EDEFQMQLQ----DTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNK 105
+ +Q + R + + V F E + K +L IA +L
Sbjct: 62 LQKVNTYIQKHNLSAKMTAKRDERGVILVLQEAVLFDTGEAAVLKDAETLLHQIAVLLQT 121
Query: 106 FPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I ++ HTDS +N +S RA + Y + ++ G+A
Sbjct: 122 MPN-EIQVEGHTDSRNISTYRYPSNWELSAARASGVIQYFTSKENLPSKRFIAVGYADTM 180
Query: 162 PIDTNDTKVGRQNNQRIEIQI 182
P+ N T + N+R+EI I
Sbjct: 181 PVKDNKTADHMKENRRVEIVI 201
>gi|308174663|ref|YP_003921368.1| flagellar motor rotation protein [Bacillus amyloliquefaciens DSM 7]
gi|307607527|emb|CBI43898.1| motility protein (flagellar motor rotation) [Bacillus
amyloliquefaciens DSM 7]
gi|328912997|gb|AEB64593.1| motility protein (flagellar motor rotation) [Bacillus
amyloliquefaciens LL3]
Length = 206
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 65/194 (33%), Gaps = 17/194 (8%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLH-------KSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+ L + + EK + + S D +
Sbjct: 8 ITLILVFFILLFSMSQIDAEKFQSAVTSIHTNGSGGEPASSSKANENSEQDLLLQNVKTY 67
Query: 58 LQ----DTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
++ + + R + + V F + + K P+L IA +L P+ I
Sbjct: 68 IKTHHLSSKMTAKRDERGVVLVLQEAVLFQTGKADVLKNAEPVLHQIAVLLKTLPNA-IQ 126
Query: 113 IQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++ HTDS +N +S RA + Y + S + G+A P+ N +
Sbjct: 127 VEGHTDSRRISTYQFPSNWELSSARAASVIRYFTAKEDFSAKRFISVGYADTKPVKDNKS 186
Query: 169 KVGRQNNQRIEIQI 182
+ N+R+EI I
Sbjct: 187 IRHMKENRRVEIVI 200
>gi|157368917|ref|YP_001476906.1| OmpA/MotB domain-containing protein [Serratia proteamaculans 568]
gi|157320681|gb|ABV39778.1| OmpA/MotB domain protein [Serratia proteamaculans 568]
Length = 165
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 56/180 (31%), Gaps = 27/180 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + + ++GC + E LQ G
Sbjct: 13 LAMMFIALLALTGCQSKPQ-------------------------GLTPEQIALLQSQGFK 47
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
++ G + + L + +Q + L T + HTD+ G
Sbjct: 48 LTDNGWEFGLS-DKVLFGNNIGKLNPESTDTVQKMGRALMSVGITQFRLDGHTDNYGEDS 106
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +S RA+ + L+ I RG + P+ N T GR N+R+ I + P
Sbjct: 107 YNDQLSLRRANAVAD-LLASVGIPRANIETRGMGKRDPVADNRTSSGRAENRRVAIVVTP 165
>gi|241206183|ref|YP_002977279.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860073|gb|ACS57740.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 177
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 51/173 (29%), Gaps = 25/173 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++ ++ C S
Sbjct: 20 VMIALIAGLALASCAKKPPNSAGDLGLGSGAGGAATPGSAQDF----------------- 62
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + L A L ++P+ I ++ H D GT +
Sbjct: 63 TVNVGDRI-------FFDTDSSSIRADASQTLDRQAQWLGRYPNYQITVEGHADERGTRE 115
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + RA K YL RGV + R ++ + + P+ D N+R
Sbjct: 116 YNLALGARRAAAAKDYLASRGVPAQRLKTIS-YGKERPVAVCDDISCWSQNRR 167
>gi|88857215|ref|ZP_01131858.1| ompA family protein [Pseudoalteromonas tunicata D2]
gi|88820412|gb|EAR30224.1| ompA family protein [Pseudoalteromonas tunicata D2]
Length = 580
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ K L + + + P + + ++DSIG N +S RA ++
Sbjct: 481 FNYGDQDLDNKGKRDLDRLIEFMEENPGRRLVLMGYSDSIGAKLKNTQLSLNRAKAVEKE 540
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L RG+ ++V G P+ ND + GR+ N+R+E+ +
Sbjct: 541 LQARGIG---VMAVEGLGEALPVANNDNESGRERNRRVEVWLL 580
>gi|107025501|ref|YP_623012.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116693317|ref|YP_838850.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|170737407|ref|YP_001778667.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|105894875|gb|ABF78039.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116651317|gb|ABK11957.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
gi|169819595|gb|ACA94177.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 221
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L L + + + + + TDS+G+ NL +S+ RA+ +
Sbjct: 116 DALFATDHATLAPTARESLDRLLSERADRTYSQVTVTGFTDSVGSDDYNLALSKRRAESV 175
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++ I+V G P+ +N T GR +N+R+EI++
Sbjct: 176 AA-YLKAHGLKTDSITVSGRGKADPVASNATPEGRASNRRVEIRL 219
>gi|312132146|ref|YP_003999486.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311908692|gb|ADQ19133.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 805
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 62/147 (42%), Gaps = 5/147 (3%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+GS + + V+ + I + ++ + L + +
Sbjct: 656 GYGSKEVQLPKFLCVDAAKQQPVIYMFKEGDVVVIENIYFDYGKYYIRRDAREGLDKLVS 715
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
++ ++P+ + + SHTDS + + N +S+ RA YL +RG+S +R + +GF
Sbjct: 716 LMREYPNMKVELYSHTDSRSSKEFNQTLSENRAKSTAEYLFKRGISRSRIVDYKGFGENQ 775
Query: 162 PIDTND-----TKVGRQNNQRIEIQIF 183
++ ++ Q N+R EI++
Sbjct: 776 LVNGCADGVKCSEAEHQLNRRTEIKVV 802
>gi|149911636|ref|ZP_01900247.1| OmpA family protein [Moritella sp. PE36]
gi|149805306|gb|EDM65320.1| OmpA family protein [Moritella sp. PE36]
Length = 211
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 67/190 (35%), Gaps = 16/190 (8%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDT--------DIVNKRFGSSLDKAEDEFQ 55
+L + + GC + + K + N D +
Sbjct: 2 KLLSIFLMSFLLLGCETIAEIQAKAAAPSTPTETTVMPKQMAQENDLSDDDADGVIAYRE 61
Query: 56 MQLQDT-GIVVSRIG------DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
L G V+ G + + + V+ + + ++ ++ ++ + +P
Sbjct: 62 QCLNSVLGSQVNNSGCGGDTVNKVRQELKVN-FSNNSAVISPRYFADIKALSNFMQHYPD 120
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ I+ H+ G+ N+ +SQ RA + LI + S +S G+ ++ +D +
Sbjct: 121 LDVVIEGHSSRQGSAALNMDLSQRRAQAVMDLLINKFGISTSRVSAIGYGFERLLDEGNN 180
Query: 169 KVGRQNNQRI 178
Q N+RI
Sbjct: 181 SYAHQRNRRI 190
>gi|49187402|ref|YP_030654.1| chemotaxis protein motB, C-terminus [Bacillus anthracis str.
Sterne]
gi|227817292|ref|YP_002817301.1| chemotaxis protein MotB [Bacillus anthracis str. CDC 684]
gi|254736614|ref|ZP_05194320.1| chemotaxis protein MotB [Bacillus anthracis str. Western North
America USA6153]
gi|254741652|ref|ZP_05199339.1| chemotaxis protein MotB [Bacillus anthracis str. Kruger B]
gi|49181329|gb|AAT56705.1| chemotaxis protein motB, C-terminus [Bacillus anthracis str.
Sterne]
gi|227002900|gb|ACP12643.1| chemotaxis protein MotB [Bacillus anthracis str. CDC 684]
Length = 156
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 5/142 (3%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
K + + + + I +V F + ++ + L + + ++++L
Sbjct: 9 KKIDQYINEKQLSSSFQTKLTEKGLMVTILENVLFDSGKADVKLESLGIAKEMSSLLVSA 68
Query: 107 PSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
I + HTD++ +N +S +RA L+Q S G+
Sbjct: 69 SPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRS 128
Query: 163 IDTNDTKVGRQNNQRIEIQIFP 184
I NDT+ G+ N+R+E+ I P
Sbjct: 129 IAPNDTQEGKAKNRRVEVFILP 150
>gi|326794456|ref|YP_004312276.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326545220|gb|ADZ90440.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 422
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 59/170 (34%), Gaps = 11/170 (6%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + D N + D + G V+ G +
Sbjct: 249 CPTTPANTAVDDKGCAVVLDSDNDGVMDTSDSCPN------TPAGFSVNSEGCTLYDLQT 302
Query: 78 VHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
V + ++ + LP+L+ AT +N + + +Q H+ G+ NL +S+
Sbjct: 303 EEVQLEIRFANNSSEVKSESLPVLEEFATAINSYDLKNVEVQGHSSLDGSASYNLRLSEA 362
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + L+++ I+ +G+ P+ + N+R+ I
Sbjct: 363 RAQSVADVLVKQFGVDASVITAKGYGETQPVINEISNEANTVNRRVVAVI 412
>gi|328554593|gb|AEB25085.1| flagellar motor protein MotS [Bacillus amyloliquefaciens TA208]
Length = 206
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 65/194 (33%), Gaps = 17/194 (8%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLH-------KSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+ L + + EK + + S D +
Sbjct: 8 ITLILVFFILLFSMSQIDAEKFQSAVTSIHTNGSGGEPASSSKANENSEQDLLLQNVKTY 67
Query: 58 LQ----DTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
++ + + R + + V F + + K P+L IA +L P+ I
Sbjct: 68 IKTYHLSSKMTAKRDERGVVLVLQEAVLFQTGKADVLKNAEPVLHQIAVLLKTLPNA-IQ 126
Query: 113 IQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++ HTDS +N +S RA + Y + S + G+A P+ N +
Sbjct: 127 VEGHTDSRRISTYQFPSNWELSSARAASVIRYFTAKEDFSAKRFISVGYADTKPVKDNKS 186
Query: 169 KVGRQNNQRIEIQI 182
+ N+R+EI I
Sbjct: 187 IRHMKENRRVEIVI 200
>gi|114046783|ref|YP_737333.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113888225|gb|ABI42276.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 191
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 62/186 (33%), Gaps = 6/186 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKK-----KVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
IK L++ + + ++ K + V + +
Sbjct: 4 IKLTCLALSLSQMLPAYAWQDTDQDGVPDIKDACPNTPANTTVMANGCVYQAEDKASSIQ 63
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ S + + ++ L L+ L+ T + + H
Sbjct: 64 CDLNDPSTYSAADCH-NIETAIVYFEFAIAEVDLSQWKALALVKAFLDANTETRLTLVGH 122
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD +GT + N +S RA +K L++ + +V G P+ N + GR+ N+
Sbjct: 123 TDIVGTPEFNYQLSLRRAQNVKRILVEDYGFNPNRFTVIGKGISEPVADNHSSEGRRLNR 182
Query: 177 RIEIQI 182
R++ +
Sbjct: 183 RVQFIV 188
>gi|121604950|ref|YP_982279.1| OmpA domain-containing protein [Polaromonas naphthalenivorans CJ2]
gi|120593919|gb|ABM37358.1| OmpA domain protein [Polaromonas naphthalenivorans CJ2]
Length = 179
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 63/181 (34%), Gaps = 7/181 (3%)
Query: 2 IKELGLSMFIMTTISGC--GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K S+ ++ S K + + ++ + +Q+
Sbjct: 1 MKRFLSSVISSLVLAATLVACGSNVKLQDVPVEDRSASSSQADADAAAAASRGVAPVQIG 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V+ + ++ +F +++ A L + +AI+ HTD
Sbjct: 61 ASDASVAGPANTAKI----VYFDFDSYVVKPEFQSVIEAHARYLTANKARKMAIEGHTDE 116
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
IG + NL + Q+RA+ ++ + ++ + F + P + N+R E
Sbjct: 117 IGGREYNLALGQKRAEAVRR-ALGLLGVTDSQVEAVSFGKEKPAVPGLDEASMAKNRRAE 175
Query: 180 I 180
I
Sbjct: 176 I 176
>gi|113474200|ref|YP_720261.1| OmpA/MotB [Trichodesmium erythraeum IMS101]
gi|110165248|gb|ABG49788.1| OmpA/MotB [Trichodesmium erythraeum IMS101]
Length = 246
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 73 TCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+P + F S + ++ + L + +I++ +TD+ G K NL S
Sbjct: 132 MVTLPSDILFESGSNKIRFDGRVIVDNLIRELRNYQDVIISVSGYTDNRGKAKVNLEKSF 191
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+A+VI YL ++ R +++ G+ PI ND++ RQ N+RIE+++
Sbjct: 192 LQAEVIAEYLSKKLGQGYRLLAI-GYGESRPIAENDSQTNRQRNRRIEVKV 241
>gi|319792464|ref|YP_004154104.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315594927|gb|ADU35993.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 216
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ L+ + L + + VI HTDSIGT N +S RA+ +K++L+ +
Sbjct: 114 KSVLKPEGRAKLTDLVEKIRGVNLEVIIAVGHTDSIGTDAYNQRLSVRRAEAVKAFLVSK 173
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ G K P+ N TK GR N+R+EI++
Sbjct: 174 -GIERNRVYTEGKGEKQPVADNRTKEGRAKNRRVEIEVV 211
>gi|228941688|ref|ZP_04104235.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228817900|gb|EEM63978.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length = 153
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 5/142 (3%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
K + + + + I ++ F + ++ + L + + ++++L
Sbjct: 6 KKIDQYINEKQLSSSFQTKLTEKGLMVTILENILFDSGKADVKLESLGIAKEMSSLLVSA 65
Query: 107 PSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
I + HTD++ +N +S +RA L+Q S G+
Sbjct: 66 SPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRS 125
Query: 163 IDTNDTKVGRQNNQRIEIQIFP 184
I NDT+ G+ N+R+E+ I P
Sbjct: 126 IAPNDTQEGKAKNRRVEVFILP 147
>gi|254507025|ref|ZP_05119163.1| outer membrane protein [Vibrio parahaemolyticus 16]
gi|219550020|gb|EED27007.1| outer membrane protein [Vibrio parahaemolyticus 16]
Length = 204
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 65/187 (34%), Gaps = 6/187 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L + + +G + + + + ++ I +
Sbjct: 1 MKSLIIVPLSVLATTGSFITTAQDEYDYIAAPVAEQIADLTDDDKDGVVNARDLCPNTPE 60
Query: 62 GIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G +V G + + + F ++ +A L K+ S I IQ
Sbjct: 61 GALVDNDGCGESLKNEEERQLRILFANDSYEINPIFSDQIKTMAEFLQKYQSASIQIQGF 120
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+G+ + NL +S++RA ++ LI V +R +S+ G+ D + N+
Sbjct: 121 ASKVGSPEYNLALSRKRAHAVQDELISFDVDPSR-VSIVGYGETRLEAEGDDETSHALNR 179
Query: 177 RIEIQIF 183
++ +
Sbjct: 180 KVTATVV 186
>gi|171060724|ref|YP_001793073.1| hypothetical protein Lcho_4056 [Leptothrix cholodnii SP-6]
gi|170778169|gb|ACB36308.1| type IV / VI secretion system protein, DotU family [Leptothrix
cholodnii SP-6]
Length = 460
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 7/152 (4%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLP 94
+ + + + ++ + +VV D + F L
Sbjct: 284 PPVAAVAQPAPQPRLATFLRPEIAEGAVVVRDEVDRSVVTLRGDGLFEPGSATLAAPKEA 343
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNR 150
+L+ +A L +F + + HTDS +N +SQERA ++ L+ + V++ R
Sbjct: 344 LLRRVADALAQFGGA-VLVTGHTDSQPIRSARFPSNWHLSQERAGAVRELLVSQQVATER 402
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G A P+ ND+ R N+R+EI +
Sbjct: 403 -VRAEGRADGEPVVANDSAGNRALNRRVEITL 433
>gi|89055277|ref|YP_510728.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88864826|gb|ABD55703.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 481
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L + L + +A + + + + HTD+ G+ N +SQERA +
Sbjct: 375 NLLFDFDSATLRRAGLQAVSELAAAIRSGQVSQVIVDGHTDAAGSDAYNQTLSQERAVAV 434
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L+ + + ++ R F P+ N ++ G Q N+R+E+ +
Sbjct: 435 AQALMVQ-GVAQGLLTTRAFGESRPVADNGSEAGAQQNRRVEVLLI 479
>gi|218662295|ref|ZP_03518225.1| hypothetical protein RetlI_23953 [Rhizobium etli IE4771]
Length = 223
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + L + + +AT L + P +
Sbjct: 85 EILSDRENIRIVGDRFVFQ-SEVLFPSGGADLNPEGQTEMAKLATALLDLAKEIPPEINW 143
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI +GV ++R ++ GF PI
Sbjct: 144 VLRVDGHTDNVPLGGTGRYRDNWELSSARATSVVKFLIGQGVPADRLVAA-GFGEFQPIA 202
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
DT R N+RIE+++ +
Sbjct: 203 PGDTPEARATNRRIELKLTEK 223
>gi|198245916|ref|YP_002214234.1| hypothetical protein SeD_A0303 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|197940432|gb|ACH77765.1| SciP protein [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|326621978|gb|EGE28323.1| SciP protein [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
Length = 434
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 10/186 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
G+++ M T+ G + + V + + + + + ++
Sbjct: 250 GIALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPPVPVHKLRLKILLANEIARGL 309
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V F + + P++ A + + + + HTDS
Sbjct: 310 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA-VTVTGHTDSQP 368
Query: 122 TLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
S++RA + + L GV + R + + G P+ N +K GR N+R
Sbjct: 369 IHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGR-VHIVGKGDTVPVADNGSKAGRAKNRR 427
Query: 178 IEIQIF 183
+EI +
Sbjct: 428 VEILVV 433
>gi|170736605|ref|YP_001777865.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169818793|gb|ACA93375.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 234
Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 40/112 (35%), Gaps = 1/112 (0%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
L + L +AI TDS G+ +N +S
Sbjct: 121 RQVLLQGDANFATDSAALTSQARNDLDRFIAANRGVEFARVAITGFTDSTGSAAHNRTLS 180
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ RA + +YL R S G P+ +N T GR N+R+EI++
Sbjct: 181 EARARTVVNYLRSN-GLQARSFSAEGLGAADPVASNATADGRAQNRRVEIRL 231
>gi|262195655|ref|YP_003266864.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262079002|gb|ACY14971.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 507
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLL 128
D + + + L ++ L+ +A L + P I I+ H G + NL
Sbjct: 367 DNTLVLLSNVLFGYDKCALSEQSHDSLREVAMTLQQHPEWGQIRIEGHASQEGKPEYNLR 426
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S RA ++ +LI GV++ R S GF P + T Q N+R+E
Sbjct: 427 LSSCRAMAVRKFLIANGVAAERLQS-LGFGDTCPKFSTGTPEEMQQNRRVEFI 478
>gi|207728190|ref|YP_002256584.1| peptidoglycan-associated lipoprotein precursor [Ralstonia
solanacearum MolK2]
gi|206591435|emb|CAQ57047.1| peptidoglycan-associated lipoprotein precursor [Ralstonia
solanacearum MolK2]
Length = 172
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 14/164 (8%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + + R + +D DE
Sbjct: 22 CSSGVKLDDTSKNATGGAATGADTRNVTPVDVTRDEL-------------TDPNSPLAKR 68
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ ++ +L A L + IQ +TD GT + NL + Q+RA+ +
Sbjct: 69 SVYFDFDSYTVKSEYQGLLGQHARYLQSHNQRKVLIQGNTDERGTSEYNLALGQKRAEAV 128
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ L +GV ++ +V + P T + N+R +I
Sbjct: 129 RRALSSQGVPDSQMEAVS-LGKEKPQATGHDEESWAQNRRSDIV 171
>gi|85704503|ref|ZP_01035605.1| hypothetical protein ROS217_05474 [Roseovarius sp. 217]
gi|85670911|gb|EAQ25770.1| hypothetical protein ROS217_05474 [Roseovarius sp. 217]
Length = 461
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 7/147 (4%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILN 104
+++ + + ++++ + V + IT + F S L+ F L +A LN
Sbjct: 317 QIERVKGFLEAEIREGIVEVFQDQSTITVRLTGSGMFGSGSDQLQPAFDTPLSRVANALN 376
Query: 105 KFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
I I H+D++ N+ +S RA+ + L + R + G A K
Sbjct: 377 D-AEGPIIIVGHSDNVPIKSSRFPTNMHLSLARAESVMRTLSTQIDDKAR-LKAEGHADK 434
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRGN 187
PI N T GR N+RIE+ + +
Sbjct: 435 DPIADNGTSEGRAKNRRIEVVLIRKST 461
>gi|258593271|emb|CBE69610.1| exported protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length = 224
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 62/217 (28%), Gaps = 40/217 (18%)
Query: 5 LGLSMFIMTTISGCGLASR-----EKKKVFLHKSNDTDIVNKRFGSSL------------ 47
+ LS+ + I+GC + E KV L ++ + +
Sbjct: 8 VLLSVSMALIIAGCATTASYRPEIEGMKVALAEAKASGAEKRAPEEYAGAEACLDWMTHE 67
Query: 48 ------------------DKAEDEFQMQLQDTGIV----VSRIGDMITCYIPVHVSFVSE 85
A + ++ + + +
Sbjct: 68 ATEFNPFADPDARINGKCRTAFTALREKMAGAPVARIPAGASAAAEKASPLKDIFFDFDR 127
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
+ + L L P+ I I+ H D GT++ N + Q RA + +
Sbjct: 128 SSIRTEMAKGLAENVRWLKANPTASIIIEGHCDERGTVEYNQALGQRRAMSV-KSYLVEA 186
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S R + V + + P T + + N+R + +
Sbjct: 187 GISARKMKVVSYGKERPFATGHDESAWKWNRRAHLVL 223
>gi|196231290|ref|ZP_03130149.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
gi|196224626|gb|EDY19137.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
Length = 316
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 3/136 (2%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ L D V + + + L + + LQ +A ++ P I
Sbjct: 181 RASLNDALGNVGAFNNKPIAMQGGALFEWGKAELLPQAIQNLQKLAQLIRLNPKATFIIS 240
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA--YKYP-IDTNDTKVG 171
HTD GT + NL++SQ+RAD ++ +L+ I+ G A +P + + +
Sbjct: 241 GHTDHTGTHEGNLILSQQRADSVRDWLVANLGIDPMRITTVGKADDEAFPNLGPDKSIEE 300
Query: 172 RQNNQRIEIQIFPRGN 187
+ N+R+EI I RG
Sbjct: 301 QAPNRRVEIVIKTRGK 316
>gi|126727783|ref|ZP_01743613.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150]
gi|126702910|gb|EBA02013.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150]
Length = 630
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 1/130 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ V +E L + + + I
Sbjct: 478 PEDAPKSPEVCITNISTALASRKIAFAPGAADIEATSLSTIDKLTEAFQGCSEVAMEIGG 537
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTDS G NL +SQ+RAD + + L+ RGV ++ ++ +G+ PI N T+ GR+ N
Sbjct: 538 HTDSQGRETMNLNLSQQRADAVLNGLLARGVLTSN-LTAKGYGETVPIADNGTEEGREEN 596
Query: 176 QRIEIQIFPR 185
+RIE +
Sbjct: 597 RRIEFVLVKE 606
>gi|172064633|ref|YP_001812283.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171998118|gb|ACB69034.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 248
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L + L + + + I +TD+ G+ N ++SQ RA +
Sbjct: 142 DALFAPGQATLTPEARKSLNALMEQQQGTFFSRVTIIGYTDATGSAALNDVLSQRRAQAV 201
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
SYL R I V G + +N+T GR N+R+EIQ+ +
Sbjct: 202 ASYLRTR-GLKYDVIEVEGRGSAQSVASNETAQGRAKNRRVEIQLVAK 248
>gi|254687000|ref|ZP_05150858.1| chemotaxis protein MotB [Bacillus anthracis str. CNEVA-9066]
gi|254724563|ref|ZP_05186346.1| chemotaxis protein MotB [Bacillus anthracis str. A1055]
gi|254754750|ref|ZP_05206785.1| chemotaxis protein MotB [Bacillus anthracis str. Vollum]
gi|254757582|ref|ZP_05209609.1| chemotaxis protein MotB [Bacillus anthracis str. Australia 94]
Length = 153
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 5/142 (3%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
K + + + + I +V F + ++ + L + + ++++L
Sbjct: 6 KKIDQYINEKQLSSSFQTKLTEKGLMVTILENVLFDSGKADVKLESLGIAKEMSSLLVSA 65
Query: 107 PSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
I + HTD++ +N +S +RA L+Q S G+
Sbjct: 66 SPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRS 125
Query: 163 IDTNDTKVGRQNNQRIEIQIFP 184
I NDT+ G+ N+R+E+ I P
Sbjct: 126 IAPNDTQEGKAKNRRVEVFILP 147
>gi|254496705|ref|ZP_05109568.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
gi|254354133|gb|EET12805.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
Length = 293
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 2/114 (1%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQ 131
V L + L+ IA + I + + D G N ISQ
Sbjct: 181 RVKESVFHFGPDSRELTDEDKAQLRRIAQYVAADMQIKVIRVVGYADESGRKGYNNAISQ 240
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+RA V+++YLI +SV F P+ NDT GR N+R+ I + +
Sbjct: 241 DRAQVVQNYLITL-GVPEEQLSVTWFGALKPVARNDTDAGRALNRRVVISLIKK 293
>gi|16763665|ref|NP_459280.1| hypothetical protein STM0282 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56414595|ref|YP_151670.1| hypothetical protein SPA2482 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|168238628|ref|ZP_02663686.1| SciP protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168261319|ref|ZP_02683292.1| SciP protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|168465340|ref|ZP_02699222.1| SciP protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|168819144|ref|ZP_02831144.1| SciP protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194736479|ref|YP_002113300.1| hypothetical protein SeSA_A0314 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197262114|ref|ZP_03162188.1| SciP protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197363525|ref|YP_002143162.1| hypothetical protein SSPA2317 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|238913699|ref|ZP_04657536.1| hypothetical protein SentesTe_21562 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|15130931|emb|CAC48213.1| SciP protein [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|16418782|gb|AAL19239.1| putative outer membrane protein, OmpA family [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|56128852|gb|AAV78358.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194711981|gb|ACF91202.1| SciP protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195631766|gb|EDX50286.1| SciP protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197095002|emb|CAR60547.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197240369|gb|EDY22989.1| SciP protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197288542|gb|EDY27919.1| SciP protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|205344023|gb|EDZ30787.1| SciP protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205350071|gb|EDZ36702.1| SciP protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|261245507|emb|CBG23297.1| putative type VI system protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267991971|gb|ACY86856.1| hypothetical protein STM14_0330 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301156902|emb|CBW16378.1| putative membrane protein (SPI-6 associated) [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312911246|dbj|BAJ35220.1| hypothetical protein STMDT12_C02770 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320084532|emb|CBY94324.1| Uncharacterized 24.6 kDa protein in ccpA 3'region ORF2 [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|321224938|gb|EFX49999.1| Outer membrane protein ImpK/VasF, OmpA/MotB [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323128597|gb|ADX16027.1| Putative outer membrane protein, OmpA family [Salmonella enterica
subsp. enterica serovar Typhimurium str. 4/74]
gi|332987228|gb|AEF06211.1| hypothetical protein STMUK_0285 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 434
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 10/186 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
G+++ M T+ G + + V + + + + + ++
Sbjct: 250 GIALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPPVPVHKLRLKILLANEIARGL 309
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V F + + P++ A + + + + HTDS
Sbjct: 310 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA-VTVTGHTDSQP 368
Query: 122 TLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
S++RA + + L GV + R + + G P+ N +K GR N+R
Sbjct: 369 IHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGR-VHIVGKGDTVPVADNGSKAGRAKNRR 427
Query: 178 IEIQIF 183
+EI +
Sbjct: 428 VEILVV 433
>gi|109898397|ref|YP_661652.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
gi|109700678|gb|ABG40598.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
Length = 366
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 61/167 (36%), Gaps = 14/167 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + + + + + D A ++ D G +
Sbjct: 205 GCPMTAVDSDNDGVIDAKDA------------CANTPMNDKVDDKGCSIFTEESKTMSL- 251
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + L+ +Q + ++ +T I+ + + GT N+ +S ERA
Sbjct: 252 -KIMFDNNSSKLKNIDSASVQEFVDFMRRYGTTNAVIEGYASAPGTDAYNMKLSVERAQN 310
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++ YL+ + + + G+ +D+ +T+ Q N+RIE +
Sbjct: 311 VRQYLVAQYNIAGSRLEAVGYGETKLLDSANTREAHQKNRRIEAYVT 357
>gi|254227964|ref|ZP_04921394.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262396053|ref|YP_003287906.1| outer membrane protein A precursor [Vibrio sp. Ex25]
gi|151939460|gb|EDN58288.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262339647|gb|ACY53441.1| outer membrane protein A precursor [Vibrio sp. Ex25]
Length = 326
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++ L ++N +P + I ++D+ G+ N ++++RA +
Sbjct: 216 FDLESAEVKDAS--TLSGTVDLMNTYPQAQVEITGYSDTTGSAAYNQQLTEKRAKAVADE 273
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + ++V+G P+ +N+T+ GRQ N+R+E+ +
Sbjct: 274 FQAK-GIAAERMTVKGMGEANPVASNETRQGRQMNRRVEVVV 314
>gi|300023927|ref|YP_003756538.1| peptidoglycan-associated lipoprotein [Hyphomicrobium denitrificans
ATCC 51888]
gi|299525748|gb|ADJ24217.1| peptidoglycan-associated lipoprotein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 171
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 56/188 (29%), Gaps = 30/188 (15%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L + T+ C K + GS D
Sbjct: 12 RLAAVSILAATVGACAS-----NKELQPDALSGKYGAATPGSQRD--------------- 51
Query: 64 VVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ + V F ++ L + L A L ++ I I+ H D GT
Sbjct: 52 --------FSQNVGDIVYFSTDSIDLTPEAQQTLSKQAQWLQQYSQYAITIEGHADERGT 103
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ N+ + RA +++ + + + I + + P+ + N+R + +
Sbjct: 104 REYNIALGARRATTVRN-FLSQHGINGARIRTISYGKERPVAVCNDISCWSQNRRAQTVL 162
Query: 183 FPRGNIKK 190
G + +
Sbjct: 163 NSGGVVSQ 170
>gi|168232215|ref|ZP_02657273.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|168240017|ref|ZP_02664949.1| SciP protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194448829|ref|YP_002044265.1| hypothetical protein SeHA_C0320 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194468900|ref|ZP_03074884.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194407133|gb|ACF67352.1| SciP protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194455264|gb|EDX44103.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205333484|gb|EDZ20248.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205339891|gb|EDZ26655.1| SciP protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
Length = 434
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 10/186 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
G+++ M T+ G + + V + + + + + ++
Sbjct: 250 GIALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPPVPVHKLRLKILLANEIARGL 309
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V F + + P++ A + + + + HTDS
Sbjct: 310 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA-VTVTGHTDSQP 368
Query: 122 TLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
S++RA + + L GV + R + + G P+ N +K GR N+R
Sbjct: 369 IHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGR-VHIVGKGDTVPVADNGSKAGRAKNRR 427
Query: 178 IEIQIF 183
+EI +
Sbjct: 428 VEILVV 433
>gi|300771553|ref|ZP_07081428.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300761542|gb|EFK58363.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 650
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + + + P+L + + PS I + SHTDS T + N+ +SQ R
Sbjct: 535 FVLENIYYDLDKYNIREDAKPILNQLVRTMRDNPSLKIELSSHTDSRATARYNMKLSQNR 594
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
A Y++ RG++ +R + +G+ ++ ++ Q N+R EI++
Sbjct: 595 AQAAVDYIVSRGIARDRIV-AKGYGESKLVNKCADGVQCSEAEHQANRRTEIKVL 648
>gi|317009738|gb|ADU80318.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
India7]
Length = 179
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 60/184 (32%), Gaps = 7/184 (3%)
Query: 1 MIKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + S + + +GC K + + ++ + + +
Sbjct: 1 MKRSSAFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPA----PEKEEPKEE 56
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+V + I + +++ L I + + ++ +TD
Sbjct: 57 PAPVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDE 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T+ + N+R++
Sbjct: 116 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGETKPKCAQKTRECYKENRRVD 174
Query: 180 IQIF 183
+++
Sbjct: 175 VKLV 178
>gi|297157602|gb|ADI07314.1| secreted protein [Streptomyces bingchenggensis BCW-1]
Length = 228
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ D + + V F + L + ++ IA + K +T + +
Sbjct: 99 ETDDGDERREDTNTKVKFALQAEVLFDKNSSKLGGEANARIRAIAQEIEKQNATSVRVFG 158
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
TD +G+ + L +S+ERA+ + + + + S+ +RG+ +YPI N T+ GR+ N
Sbjct: 159 FTDDLGSALHGLKLSKERANAV-QHALSANLDSSVQYQIRGYGEQYPIADNSTEEGRKKN 217
Query: 176 QRIEI 180
+R+E+
Sbjct: 218 RRVEV 222
>gi|205374484|ref|ZP_03227280.1| flagellar motor protein MotS [Bacillus coahuilensis m4-4]
Length = 211
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 49/156 (31%), Gaps = 6/156 (3%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
E + + LD+ + + V SR + + V F
Sbjct: 52 EDNDAPPNTDAGEPQTKEELDQLLDEIQQYLDENKLNDVAVASRTERGVVLVLQEQVLFQ 111
Query: 84 -SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIK 138
+ P L +A +L+ P+ I I+ HTD+ + N +S R+ +
Sbjct: 112 SGNAVIISDAYPFLDKVAELLSSIPNM-IKIEGHTDNRPISTSVFPSNWELSAARSSGVI 170
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
Y I G+ P+ ND+ Q
Sbjct: 171 RYFISNHQLDPTRFIAVGYGDTRPLAPNDSAENLQK 206
>gi|149919675|ref|ZP_01908153.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1]
gi|149819446|gb|EDM78876.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1]
Length = 262
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTV 110
+ + I V + + + F L+K+ L + L
Sbjct: 114 ASLKKMVDAGTIKVGFREGRLVVKLDEGILFDSGRAKLKKEGQAALTELIAPLRDVNRDW 173
Query: 111 IAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
I + HTD++ ++N +S RA + ++LI G+ + R S G+A P+ N
Sbjct: 174 I-VAGHTDNVPIKTAKFQSNWELSSARAVEVVTFLIDTGMPAERIGSA-GYAEFDPVADN 231
Query: 167 DTKVGRQNNQRIEIQIFP 184
+ GR N+RIEI + P
Sbjct: 232 SSPEGRAQNRRIEIVLMP 249
>gi|170699332|ref|ZP_02890380.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170135762|gb|EDT04042.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 219
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 60/218 (27%), Gaps = 38/218 (17%)
Query: 2 IKELGLSMFIMTT-ISGCGLASREKKKVFLHKSNDT----DIVNKRFGSSLDKAEDEFQM 56
+K + L++ ++ C AS + +S D + SS
Sbjct: 1 MKNIHLALLASVVSLAACSSASGPTYNAYELQSRDGIRTFRVDCHGILSSAKTCMKVATR 60
Query: 57 QLQDTGIVVSRIGDMITCYIP--------------------------------VHVSFVS 84
+ + V
Sbjct: 61 MCGNDAVRVVDATTPYRDGADPHSMVFQCGAAPAPVAAAAAPAAAVEKMSLTGDAYFATD 120
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L L + + + +TD+ G+ +N +S+ RAD + + ++
Sbjct: 121 SAVLTSAATAALDKLLNQQGDRHFARVEVDGYTDATGSDGHNQALSKRRADAV-AGYLRE 179
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G P +NDT GR N+R+EI +
Sbjct: 180 HGLKADAFAATGHGEANPAASNDTVEGRARNRRVEISL 217
>gi|110639062|ref|YP_679271.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281743|gb|ABG59929.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 380
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 3/140 (2%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
G + + +++ D + + S+ L + L +IA +
Sbjct: 243 GVYAIQYKKPVVIEIVADTAPAYIKVDRVVL--KNLLFSQSKSELLPQAAKELDMIAEWM 300
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
N+ + HTD+ G K N+L+S++R +K+YL+ + + I G+ +PI
Sbjct: 301 NRETDVRVRFIGHTDNQGDAKLNVLLSEQRVSKVKAYLVSK-GIAADRIETVGYGGAFPI 359
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
N + R+ N+R+E++I
Sbjct: 360 TDNAFEETRKLNRRVEMEIL 379
>gi|91978605|ref|YP_571264.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91685061|gb|ABE41363.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 165
Score = 80.5 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 58/183 (31%), Gaps = 30/183 (16%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+L + + ++ C K + + +
Sbjct: 12 KLAAVLAVALSMGACA---NNKTGLGADGAMASAATPGSQQDF----------------- 51
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V +GD + + L + L A L + I+ H D GT
Sbjct: 52 -VVNVGDRV-------FFESDQTELSPQAAATLDKQAQWLQTYNRYSFTIEGHADERGTR 103
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N+ + RA +++YL RG+ +R ++ + + P+ + N+R + +
Sbjct: 104 EYNIALGARRAQSVRNYLSSRGIEPSRMRTIS-YGKERPVAVCNDISCWSQNRRA-VTVL 161
Query: 184 PRG 186
G
Sbjct: 162 NAG 164
>gi|317064019|ref|ZP_07928504.1| autotransporter protease [Fusobacterium ulcerans ATCC 49185]
gi|313689695|gb|EFS26530.1| autotransporter protease [Fusobacterium ulcerans ATCC 49185]
Length = 805
Score = 80.5 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI-AIQSHTDSIGTLKNNLLISQERADVI 137
+ E L + +++ I+ ++K I I+ HTDSIGT + N +S++RA+ +
Sbjct: 699 NHFSFDESSLTEDGKKVIRKISEEIDKNSKRGILTIEGHTDSIGTTEYNQKLSEKRAESV 758
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + +G+ P+ N GR N+R++I+
Sbjct: 759 EKEFKENLK-TEIKYETKGYGKSRPVADNKIAEGRAKNRRVDIK 801
>gi|298292993|ref|YP_003694932.1| peptidoglycan-associated lipoprotein [Starkeya novella DSM 506]
gi|296929504|gb|ADH90313.1| peptidoglycan-associated lipoprotein [Starkeya novella DSM 506]
Length = 164
Score = 80.5 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 36/182 (19%)
Query: 1 MIKELG-----LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M+++LG + + C + L +
Sbjct: 4 MLRQLGGARAAFIVGFALLAAACARNPMDGAGQALGSAPPGSPQE--------------- 48
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
V +GD + + L + L A LN + I+
Sbjct: 49 --------FVVSVGDRV-------FFDSDQTDLTPQAQATLDKQAQWLNHYGKYTFTIEG 93
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
H D GT + N+ + RA ++ YL+QRGVS++R ++ + + P+ + N
Sbjct: 94 HADERGTREYNIALGARRAQSVRDYLVQRGVSASRMRTIS-YGKERPVAVCNDISCWSQN 152
Query: 176 QR 177
+R
Sbjct: 153 RR 154
>gi|167993292|ref|ZP_02574387.1| SciP protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205328610|gb|EDZ15374.1| SciP protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
Length = 434
Score = 80.5 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 10/186 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
G+++ M T+ G + + V + + + + + ++
Sbjct: 250 GIALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPPVPVHKLRLKILLANEIARGL 309
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V F + + P++ A + + + + HTDS
Sbjct: 310 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA-VTVTGHTDSQP 368
Query: 122 TLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
S++RA + + L GV + R + + G P+ N +K GR N+R
Sbjct: 369 IHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGR-VHIVGKGDTVPVADNGSKAGRAKNRR 427
Query: 178 IEIQIF 183
+EI +
Sbjct: 428 VEILVV 433
>gi|269119353|ref|YP_003307530.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
gi|268613231|gb|ACZ07599.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
Length = 178
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ L+ A ++ S + I +TDS G+ + N +S
Sbjct: 61 IRLGEDKLYFDFDDSRVKPEYYGELRAAAEVIK-NSSMRVNITGYTDSKGSAEYNEKLSL 119
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQIF 183
RA+ +K+ L++ G++ N VRG PI N D GR N+RIE+++
Sbjct: 120 RRAEAVKAKLMEFGLNENYIAGVRGLGESNPIAPNTKSDGKDNPEGRAKNRRIELELI 177
>gi|206564091|ref|YP_002234854.1| putative OmpA/MotB family outer membrane protein [Burkholderia
cenocepacia J2315]
gi|198040131|emb|CAR56114.1| putative OmpA/MotB family outer membrane protein [Burkholderia
cenocepacia J2315]
Length = 169
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 2/129 (1%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L+ G + G P + L+ +++ I L + + +
Sbjct: 43 ALKSAGFQETGQGFEFGSTGP-ILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGY 101
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+D GT +L +S+ RA+V+ L + I+V G P+ N T VGR N+
Sbjct: 102 SDDEGTAAYDLELSRRRAEVVAVELAD-VGLDAKRIAVVGRGKSDPVGDNKTPVGRAQNR 160
Query: 177 RIEIQIFPR 185
R I + PR
Sbjct: 161 RAAIVVSPR 169
>gi|30314412|gb|AAP15415.1| outer membrane lipoprotein precursor [Burkholderia vietnamiensis]
Length = 150
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 19/165 (11%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYI 76
C + K + T + V + D
Sbjct: 1 CKSGVKLDDKANNAGAVSTQPSADNVAQ-----------------VNVDPLNDPNSPLAK 43
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ ++ P+LQ A L P + IQ +TD GT + NL + Q+RA+
Sbjct: 44 RSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEA 103
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ + GV+ ++ +V + P T + N+R ++
Sbjct: 104 VRRAMALLGVNDSQMETVS-LGKEKPQATGHDETSWAQNRRADLV 147
>gi|78485928|ref|YP_391853.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78364214|gb|ABB42179.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2]
Length = 259
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 70/195 (35%), Gaps = 18/195 (9%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI- 63
+ L + I ++K + + ++ + L E L+ I
Sbjct: 49 MTLILAFFILILSISEIKQDKFETLQTNLGQGLLKKEKVVNPLQNLESALSKVLESNQIN 108
Query: 64 ---VVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFP--STVIAIQSHT 117
++ + + +P + F LE K ++ +A +N FP + +I I+ HT
Sbjct: 109 PAEAMTLNENELRIDLPGELLFEVGSTQLEPKSKQLITALAKEINAFPLHNYLIEIEGHT 168
Query: 118 DSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG-- 171
D N +S RA + + + + G+A P N TK G
Sbjct: 169 DDTPIHSIRFPSNWELSAGRAISVLKVF-FNTGINKQRLKAIGYADTRPKKPNRTKKGIA 227
Query: 172 ----RQNNQRIEIQI 182
+ N+R+EI++
Sbjct: 228 IPGNQATNRRVEIKV 242
>gi|54302595|ref|YP_132588.1| hypothetical protein PBPRB0916 [Photobacterium profundum SS9]
gi|46916019|emb|CAG22788.1| hypothetical protein PBPRB0916 [Photobacterium profundum SS9]
Length = 208
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 10/192 (5%)
Query: 7 LSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + C S +K + + + +S ++ + I
Sbjct: 12 IILISCVFLFACTTTSEQKSDSVTGKSQGNTENTTSSLNIYTSSNELNTSRNSAVVTDSI 71
Query: 64 VVSRIGD------MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ D + V L K +L IA L + + + H+
Sbjct: 72 TYTATPDASILLAQLPEQKEVIYFDNMNYELSVKNQQLLDPIALRLKLHLDSYLIVIGHS 131
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ + NL++S ERA + Y+ I + I +++ R+ N+R
Sbjct: 132 DDAGSKEENLVLSFERAFSVAIYISSVFGIEEERIQIVALGDDELISNGNSEQERRLNRR 191
Query: 178 IEIQIFPRGNIK 189
+E I P+ ++
Sbjct: 192 VE-VISPKAIVR 202
>gi|126732831|ref|ZP_01748624.1| hypothetical protein SSE37_02990 [Sagittula stellata E-37]
gi|126706670|gb|EBA05743.1| hypothetical protein SSE37_02990 [Sagittula stellata E-37]
Length = 605
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 8/137 (5%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
D+ + L+ + V + I + + LE + I +LN+ P
Sbjct: 465 DDIRTALEGQEVEVDVKNEWILIRLGSALRFASGRAELENDLSALATAIGVVLNEQPG-P 523
Query: 111 IAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
I I H+DS G K N +SQ RA + + R +SV G PI
Sbjct: 524 IRIVGHSDSVPLSGRGRFKTNEELSQARAQTVTDLVTANLDDKER-VSVEGKGPVDPIAD 582
Query: 166 NDTKVGRQNNQRIEIQI 182
N T GR N+R+EI I
Sbjct: 583 NATAEGRARNRRVEIMI 599
>gi|45659294|ref|YP_003380.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|45602540|gb|AAS72017.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 428
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + + + + + +L + + L + + I I HTD G ++
Sbjct: 310 QELEKGKSISLDSIHFSLGSYEILENSFSILDNLNSYLKENLNIKIKITGHTDLNGDSQD 369
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
NL++S+ RA+ +K YL++RG+ S R I+ G PI N+R E QI R
Sbjct: 370 NLILSRNRANAVKDYLVKRGIDSQRIIT-DGKGSSEPIVPMKNPETDYKNRRTEFQIISR 428
>gi|24217036|ref|NP_714517.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
gi|24198445|gb|AAN51535.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
Length = 428
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + + + + + +L + + L + + I I HTD G ++
Sbjct: 310 QELEKGKSISLDSIHFSLGSYEILENSFSILDNLNSYLKENLNIKIKITGHTDLNGDSQD 369
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
NL++S+ RA+ +K YL++RG+ S R I+ G PI N+R E QI R
Sbjct: 370 NLILSRNRANAVKDYLVKRGIDSQRIIT-DGKGSSEPIVPMKNPETDYKNRRTEFQIISR 428
>gi|84394101|ref|ZP_00992836.1| protein F-related protein [Vibrio splendidus 12B01]
gi|84375292|gb|EAP92204.1| protein F-related protein [Vibrio splendidus 12B01]
Length = 211
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPV 78
+ + + ++ + +G + D ++ L+ I + G+ + +
Sbjct: 45 SVASNRSYSVQNSTHQQKTITTNYGRGVST-NDPLEVFLRQNRIDFEVLPGNHVMVKLEQ 103
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
HV+F F E + L + + L++ + I+ HTD+ G+ + N +S+ RA +
Sbjct: 104 HVNFKTGSAFPEPAYNQWLDTLGSYLSQRQDIDVVIEGHTDNTGSDRVNAPLSELRAKEV 163
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K+ L S+R I RGF P TN + G+ N+R+E+ +
Sbjct: 164 KARLESNY-VSSRAIYTRGFGEYVPACTNASPQGKACNRRVELMLI 208
>gi|260770556|ref|ZP_05879489.1| protein F-related protein [Vibrio furnissii CIP 102972]
gi|260615894|gb|EEX41080.1| protein F-related protein [Vibrio furnissii CIP 102972]
gi|315181629|gb|ADT88542.1| OmpA family protein [Vibrio furnissii NCTC 11218]
Length = 209
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 3/157 (1%)
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEV 86
S + V G + + D Q L D GI + G+ + + V
Sbjct: 50 GTTPSPVSTNVQGPMGQTRTSSYDALQRFLLDNGIDYEVMPGNHVMVKLKDTVKFDTGSS 109
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ + L ++ + L++ I I HTD+ G + N +S +RA ++K+ LI + V
Sbjct: 110 NVSQDSAYWLSVMGSFLSRERGIDIVIDGHTDNTGKPRFNDALSVKRAQMVKNTLINKNV 169
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + I RG+ P N T GR N+R+E+
Sbjct: 170 ARD-AIYTRGYGEYVPACNNGTYEGRACNRRVELLFI 205
>gi|124004962|ref|ZP_01689805.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123989640|gb|EAY29186.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 645
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + L + +L P + I HTDS G NL +SQ RAD IK Y
Sbjct: 539 FKEGKADVIPDMEADLDKLVILLADHPKLGLKISGHTDSSGDSDANLKLSQNRADAIKKY 598
Query: 141 LIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQRIEIQIF 183
++ +G + ++ G+ PI + T ++ N+R+E +I
Sbjct: 599 IVDKGKFDPKRVTAIGYGDTVPIIKSEKTDEDKKINRRVEFEII 642
>gi|152995997|ref|YP_001340832.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
gi|150836921|gb|ABR70897.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
Length = 311
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+ + D + + + +++++ + + + + +
Sbjct: 127 RNDAMQSKADAEKLRMEANAERNRSQEFQRQL---GMLNAKATNRGMIMTLGDLSFATGK 183
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L L + LNK+ I I+ +TDS+G+ NL +SQ RA ++ YL+ +
Sbjct: 184 AKLQPSVLIDLDKLVVFLNKYADRSIVIEGNTDSVGSEALNLRLSQHRASAVRDYLVGK- 242
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ ++V P+DTND+K+GRQ+N+R++I I
Sbjct: 243 GINSARLTVVANGEGNPLDTNDSKLGRQHNRRVDIVI 279
>gi|325294742|ref|YP_004281256.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065190|gb|ADY73197.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 255
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFP-STVIAIQS 115
L G + + + + V F L K L +A I+ K P + + I+
Sbjct: 87 LPAYGYQIVVTQEYVLLRLFNKVLFKPNSLELTPKAKEALDKVAEIIKKLPGNYQVRIEG 146
Query: 116 HT------DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
HT + + ++ +S RA + YL+ RGV+ + I+V G+ P+ T
Sbjct: 147 HTSIEEPTKYLPYIHDDWDLSIRRATTVAKYLVSRGVNPKKIIAV-GYGNTRPLYTWKNP 205
Query: 170 VGRQNNQRIEIQI-FPRGNIKK 190
+ + N+R+EI + + +K
Sbjct: 206 ILQARNRRVEIYLEIAKNKEEK 227
>gi|206562090|ref|YP_002232853.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
gi|198038130|emb|CAR54078.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
Length = 239
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 1/112 (0%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
L L I + +AI TDS G+ +NL +S
Sbjct: 126 RQVLLQGDANFAFDSAALTPDARAQLDRFVDINSGIEFRRVAITGFTDSTGSNTHNLALS 185
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + +YL G+ + F+S G P+ +N T GR N+R+EI+I
Sbjct: 186 ASRARNVMNYLRSNGLKAQSFVS-EGLGAADPVASNATAEGRAQNRRVEIRI 236
>gi|163741717|ref|ZP_02149107.1| OmpA family protein [Phaeobacter gallaeciensis 2.10]
gi|161384890|gb|EDQ09269.1| OmpA family protein [Phaeobacter gallaeciensis 2.10]
Length = 183
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 48/134 (35%), Gaps = 6/134 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D AE + G V R G++ + + L+
Sbjct: 53 DGAEGFMTPHVTRDGKPVCRRGNICGVMPSDQFFATNRHRISAAGQQRLRE---FFQTAN 109
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I HTDS + + N+ +SQ RA+ + R + VRG+ + P ND
Sbjct: 110 ARSFIITGHTDSRASDEYNMRLSQRRANAVAKVGQS---VGARILEVRGYGERDPRVPND 166
Query: 168 TKVGRQNNQRIEIQ 181
+ N+R+EI
Sbjct: 167 SAANMAQNRRVEII 180
>gi|77918775|ref|YP_356590.1| MotB-like flagellar protein [Pelobacter carbinolicus DSM 2380]
gi|77544858|gb|ABA88420.1| MotB-like flagellar protein [Pelobacter carbinolicus DSM 2380]
Length = 247
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V G +I + L+ LP+L+ +A ++ P ++ I+ HTD+
Sbjct: 106 VKDRGAVILRVKDAILFDAGSTELKPTALPILREVAGLVKPLP-LLLRIEGHTDNQKPAN 164
Query: 125 N---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N IS +RA + + + +S G+ + P+ + N+R+E
Sbjct: 165 PAITNWDISVQRAVAVLKFFAGEDLLPLDRLSAVGYGDQRPVAPGLGPEQQALNRRVEFV 224
Query: 182 I 182
+
Sbjct: 225 L 225
>gi|302343053|ref|YP_003807582.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
gi|301639666|gb|ADK84988.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
Length = 247
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 61/156 (39%), Gaps = 8/156 (5%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQ-DTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFL 93
++ + + F + + + V+ + + H+ F + ++
Sbjct: 87 SEARAAMESRQMSEQVQNFVNETGLGSEVNVNAGNKGVRLRVKGHLFFEPGGAEIRQEAK 146
Query: 94 PMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+L+ IA + KF + ++ HTD S +N +S RA + +
Sbjct: 147 KLLEGIAKVTKKF-DFYLTVEGHTDDQPISTPRFPSNWELSAARAAAVLR-YLAGDGVPE 204
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ +S G+A +PI N ++ GR N+R+E +
Sbjct: 205 KRMSAIGYASSFPIAANTSEAGRNKNRRVEFVFTKQ 240
>gi|260751226|gb|ACX48919.1| cellulase [Streptomyces sp. GS11]
gi|307574878|gb|ADN52664.1| cellulase [uncultured bacterium]
Length = 340
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 55/139 (39%), Gaps = 3/139 (2%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
GS E + ++ + ++ L ++
Sbjct: 195 GSEPVVQEKAVEEVVEARPATRIVDHVYPAQTTATVQFDLESAEVKDAS--NLSGTVDLM 252
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
N +P + I ++D+ G+ N ++++RA + + + ++V+G P+
Sbjct: 253 NTYPQAQVEITGYSDTTGSAAYNKQLTEKRAKAVADEFQAK-GIAAERMTVKGMGEANPV 311
Query: 164 DTNDTKVGRQNNQRIEIQI 182
+N+T+ GRQ N+R+E+ +
Sbjct: 312 ASNETRQGRQMNRRVEVVV 330
>gi|254418180|ref|ZP_05031904.1| peptidoglycan-associated lipoprotein, putative [Brevundimonas sp.
BAL3]
gi|196184357|gb|EDX79333.1| peptidoglycan-associated lipoprotein, putative [Brevundimonas sp.
BAL3]
Length = 184
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 59/158 (37%), Gaps = 18/158 (11%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + G++ E +F V +GD I
Sbjct: 33 AAPETAPTGPAYPTAPTGPVTGGNMGAAAPGTEQDF----------VVNVGDRI------ 76
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + + +P L A L ++P + I+ + D GT + NL + RA+ ++
Sbjct: 77 -YFDLDSYDVRSEAMPRLDAQAQWLQRYPQVTVRIEGNADERGTREYNLALGARRAEAVR 135
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+YLI RGV + R ++ + + PI ++ N+
Sbjct: 136 TYLINRGVPAGRIDTIS-YGKERPIAEGSSEDSWARNR 172
>gi|332088113|gb|EGI93238.1| ompA family protein [Shigella boydii 5216-82]
Length = 127
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + ++ L + +Q +A L T + HTD+ G
Sbjct: 8 ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAQLASTGLTHARMDGHTDNYGEDSY 67
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA+V+ G ++ +G KYPI +N T GR N+R+ + I
Sbjct: 68 NEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVIT 125
>gi|213964024|ref|ZP_03392268.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
gi|213953356|gb|EEB64694.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
Length = 635
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 6/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I +++ + L I ++ ++P I I+SHTDS + NL +S
Sbjct: 518 VFDIKEIYFDLNKSDIRPDAAVELAKIVEVMKEYPKMKIDIRSHTDSRASDAYNLALSDR 577
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTND---TKVGRQNNQRIEIQIFP 184
RA I + + ++ +G+ + +N T+ Q N+R E +
Sbjct: 578 RAKSTLE-WIVKQGIERKRLTAKGYGETRLVNGCSNGVPCTEEEHQANRRSEFIVVN 633
>gi|186470892|ref|YP_001862210.1| DotU family type IV/VI secretion system protein [Burkholderia
phymatum STM815]
gi|184197201|gb|ACC75164.1| type IV / VI secretion system protein, DotU family [Burkholderia
phymatum STM815]
Length = 410
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + + ++G +A + ++ G + ++ +
Sbjct: 232 MAIGALCLVLLAGAAVAGYWRYTKVRQAEPPVSPIDALAG----RLAGHLADEVNAGTVT 287
Query: 65 VSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
++ T + + + + P++ I + K P + + HTDS
Sbjct: 288 LAENAQHTTLSLRLEGIFEAGQSSVNPWVKPLITTIGQEVAKTPG-RVLVTGHTDSQPFS 346
Query: 124 KNN----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
L +S RA + L+ GV+++R S G P N T GR N+R+E
Sbjct: 347 HMQRSSNLALSDARAQEVAQILVSAGVATDRIDST-GKGNAEPAADNATPQGRLRNRRVE 405
Query: 180 IQI 182
I +
Sbjct: 406 ITV 408
>gi|163737130|ref|ZP_02144548.1| OmpA domain protein [Phaeobacter gallaeciensis BS107]
gi|161389734|gb|EDQ14085.1| OmpA domain protein [Phaeobacter gallaeciensis BS107]
Length = 326
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ--DTGIVVSR 67
+ +S G A+ + + + T ++ + S+ ++ + L +++
Sbjct: 149 IVTLLVSRSGNATFVQVIEVTPEGDSTPVITEGTTSASGGSDAAPTVALPLIGAAELITG 208
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + V L K L +A L + P + + HTD++G+L+ N+
Sbjct: 209 LRRNGRAVLADLEFETGAVTLGAKPYDSLAALAEFLIQNPDFDVLLVGHTDTVGSLEQNI 268
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
IS+ RAD ++ L+ ++V G + P+ TN T GR+ N+R+E+ + R
Sbjct: 269 AISERRADAVRRRLLADSAVDRARVAVAGAGFMAPLTTNLTPEGREANRRVEVVLIRR 326
>gi|91224215|ref|ZP_01259478.1| putative outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|269965628|ref|ZP_06179741.1| putative outer membrane protein OmpA [Vibrio alginolyticus 40B]
gi|91191126|gb|EAS77392.1| putative outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|269829696|gb|EEZ83932.1| putative outer membrane protein OmpA [Vibrio alginolyticus 40B]
Length = 326
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 55/139 (39%), Gaps = 3/139 (2%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
GS E + ++ + ++ L ++
Sbjct: 179 GSEPVVQEKAVEEVVEARPATRIVDHVYPAQTTATVQFDLESAEVKDAS--NLSGTVDLM 236
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
N +P + I ++D+ G+ N ++++RA + + + ++V+G P+
Sbjct: 237 NTYPQAQVEITGYSDTTGSAAYNKQLTEKRAKAVADEFQAK-GIAAERMTVKGMGEANPV 295
Query: 164 DTNDTKVGRQNNQRIEIQI 182
+N+T+ GRQ N+R+E+ +
Sbjct: 296 ASNETRQGRQMNRRVEVVV 314
>gi|71908538|ref|YP_286125.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71848159|gb|AAZ47655.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 175
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 20/182 (10%), Positives = 56/182 (30%), Gaps = 14/182 (7%)
Query: 1 MIKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K++ L++ + ++ C + + + + + ++ L
Sbjct: 1 MSKKIALALLSSAVCLLAACSTTATAPTETTTPQKAPDSV--RPVAAAPSGLSAADLAAL 58
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ +++++ + + L P + ++ +TD
Sbjct: 59 ---------RDPSNPLSKRSIYFDLDSSAIKQEYRSVAEAHGKFLANRPGVKVTVRGNTD 109
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ + NL + Q RAD + + I + + P + N+
Sbjct: 110 ERGSREYNLALGQRRAD-ATKQALSAYGVVSDQIETVSYGSEKPAAEGHNEAAWAKNRHA 168
Query: 179 EI 180
+I
Sbjct: 169 DI 170
>gi|163737814|ref|ZP_02145231.1| hypothetical protein RGBS107_19823 [Phaeobacter gallaeciensis
BS107]
gi|161389340|gb|EDQ13692.1| hypothetical protein RGBS107_19823 [Phaeobacter gallaeciensis
BS107]
Length = 655
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 54/171 (31%), Gaps = 14/171 (8%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
K ++ + + + L V GD +
Sbjct: 487 KRLETEAEQLSSKAQDLEQYRSEFFGRLRDVL-GNQEGVRIEGDRFVF-ASEVLFAPGSA 544
Query: 87 FLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDS-----IGTLKNNLLISQERA 134
L + +A IL + +I + HTD +N +SQ RA
Sbjct: 545 DLSSAGRAEIGKVAGILQAVAAAIPPEINWIIRVDGHTDDTPLGIHPKFADNWELSQGRA 604
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ Y++Q +S GF P++ T V R N+RIE++ R
Sbjct: 605 LSVVRYMVQALGIPPERLSANGFGEYQPVNPAPTAVARAQNRRIELKFTER 655
>gi|116253708|ref|YP_769546.1| OmpA family peptidoglycan-associated lipoprotein precursor
[Rhizobium leguminosarum bv. viciae 3841]
gi|115258356|emb|CAK09458.1| putative OmpA family peptidoglycan-associated lipoprotein precursor
[Rhizobium leguminosarum bv. viciae 3841]
Length = 177
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 52/173 (30%), Gaps = 25/173 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +++ ++ C + L
Sbjct: 20 VMIALIAGLALASCAKKNVPNSAGDLGLGAGAGAATPGSAQDF----------------- 62
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+GD I + L A L ++P+ I ++ H D GT +
Sbjct: 63 TVNVGDRI-------FFDTDSSSIRADASQTLDRQAQWLGRYPNYQITVEGHADERGTRE 115
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + RA K YL RGV + R ++ + + P+ D N+R
Sbjct: 116 YNLALGARRAAAAKDYLASRGVPAQRLKTIS-YGKERPVAVCDDISCWSQNRR 167
>gi|332519179|ref|ZP_08395646.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045027|gb|EGI81220.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 284
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+D I VS ++ I + F + K +LQ +A ++N PS + ++ HT
Sbjct: 141 EDEDITVSIDETVVMISISDKMLFNTGSYRVSNKANDILQKLADVINSEPSIDVMVEGHT 200
Query: 118 DSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
DS TLK+N +S RA + L S + G + P+ NDTK GR
Sbjct: 201 DSRTISTPTLKDNWDLSVLRATSVVRKLQNEYSVSPEKLIASGRSSYQPLTANDTKDGRS 260
Query: 174 NNQRIEIQIFPR 185
N+R I + P
Sbjct: 261 KNRRTRIILLPN 272
>gi|159045480|ref|YP_001534274.1| hypothetical protein Dshi_2940 [Dinoroseobacter shibae DFL 12]
gi|157913240|gb|ABV94673.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 648
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 67/185 (36%), Gaps = 14/185 (7%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
T ++ R + + + + + + E + L V GD
Sbjct: 466 TALARVAAEQRARADLEEAERRRLEAEAQDLARYRSEFFGELRD-LLGGQEGVRIEGDRF 524
Query: 73 TCYIPVHVSFVSEVFLEKKFLP-------MLQLIATILNKFPSTVIAIQSHTDSI----- 120
+ EV L + +L+ +A + + V+ + HTD++
Sbjct: 525 VFS-SSVLFDTGEVALSPQGQAEVAKVAGILRSVADRIPEGIDWVLRVDGHTDNVPVTGG 583
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G +N +SQ RA + +LI+ ++ GF P+ DT GR N+RIE+
Sbjct: 584 GKYADNWELSQGRALSVARFLIEDQGIPPDRLAPTGFGEYQPVSLEDTPEGRALNRRIEL 643
Query: 181 QIFPR 185
+ +
Sbjct: 644 KFTEK 648
>gi|118602526|ref|YP_903741.1| OmpA/MotB domain-containing protein [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
gi|118567465|gb|ABL02270.1| OmpA/MotB domain protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 190
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 13/191 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKV---------FLHKSNDTDIVNKRFGSSLDKAE 51
M K + L+ I+ +S C KKV N + V + SS +
Sbjct: 1 MSKIIFLTTTIVL-LSSCSSVDDLYKKVLFKPSVVVIEDRTENTQENVIEVDQSSFESQG 59
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ + + D + + F + +++ + A + P
Sbjct: 60 FSRSSVDISSIVEPVVVADFRKTNVSFVLYFSYDDTEIDEDSTKQIVKHANFMRNNPELN 119
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ ++ HTD GT + NL + + RA +K I + + V F + PI +
Sbjct: 120 LRLEGHTDERGTREYNLALGENRALSVKE--ILGLYDLSSRVKVISFGEEKPILQRHDED 177
Query: 171 GRQNNQRIEIQ 181
Q N+R+E
Sbjct: 178 VWQKNRRVEFI 188
>gi|242280812|ref|YP_002992941.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242123706|gb|ACS81402.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 248
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 48/121 (39%), Gaps = 6/121 (4%)
Query: 65 VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V D + F L + +L + +IL + + ++ HTD+
Sbjct: 119 VKADQDGVVVSTDSATLFEPGSATLRPEAHKVLDKVISILKDH-NYNLVVRGHTDNSEIH 177
Query: 124 KN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
N +S RA Y++++G + + + G+A P+ ND+ + N+R+E
Sbjct: 178 SRKFPTNWELSSARAASALRYIVEQGGIAPKRLKAVGYADTQPLVKNDSPANKSKNRRLE 237
Query: 180 I 180
Sbjct: 238 F 238
>gi|330864159|emb|CBX74225.1| hypothetical protein YEW_BY08350 [Yersinia enterocolitica W22703]
Length = 206
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 57/127 (44%), Gaps = 2/127 (1%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL--PMLQLIATILNKFPSTVIAIQSHT 117
+ I + + + + + L+ L + ++ + + I H+
Sbjct: 72 NQQIESYQDIPAFSSTQMAPMFDSNSIKLKPNAQTNETLASLLLLVEQHQGRKVLIIGHS 131
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G+ N+ IS++RA V++ +LI+ + +RG P+ +NDT G+ N+R
Sbjct: 132 DNTGSASFNMTISEQRAVVVRDWLIKNSALAKEDFIIRGMGALEPVASNDTPAGQDQNRR 191
Query: 178 IEIQIFP 184
+E+ + P
Sbjct: 192 VEVLLLP 198
>gi|323188374|gb|EFZ73665.1| ompA family protein [Escherichia coli RN587/1]
Length = 127
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 49/118 (41%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + ++ L + +Q +A L T + HTD+ G
Sbjct: 8 ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSY 67
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N ++S +RA+V+ G ++ +G KYPI +N T GR N+R+ + I
Sbjct: 68 NEVLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVIT 125
>gi|187923217|ref|YP_001894859.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
gi|187714411|gb|ACD15635.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 168
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 33/185 (17%)
Query: 2 IKELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
++ + + ++GC + L+K+
Sbjct: 1 MRNILSTTACAISILLVTGCAAQLNRDTETSLNKAV------------------------ 36
Query: 59 QDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
GI V+ + + +P + ++ + ++ A +L + I ++ +T
Sbjct: 37 ---GIEVAPVAGGVAVKLPETALFDFNKSEVRSDAAAVIDRSAVLLKRSKK-PIVVEGYT 92
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D++GTL+ N +S+ RA L+ RG++ +R I +G AY P+ +NDT GR N+R
Sbjct: 93 DNVGTLEYNQHLSEARASAAGYALVARGIAMDR-IRTKGNAYNNPVASNDTPEGRALNRR 151
Query: 178 IEIQI 182
EI +
Sbjct: 152 TEIVV 156
>gi|332715427|ref|YP_004442893.1| OmpA-like porin [Agrobacterium sp. H13-3]
gi|325062112|gb|ADY65802.1| OmpA-like porin [Agrobacterium sp. H13-3]
Length = 503
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 8/150 (5%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL 103
S L+K Q ++ + ++ + + I F + +F ++Q I L
Sbjct: 333 SRLEKLMAFLQPEVDRKLVTLADVNGRLRVRINNSGLFTTGSADVSPQFRDLIQRIGGAL 392
Query: 104 NKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ I +TD++ +N +S+ RA + L Q I G A
Sbjct: 393 AAEKFRAVVI-GYTDTVPIKTVEFPSNWHLSEARAKAVGDILSQFTGPEA--ILTEGRAD 449
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
PI N T+ GRQ N+R EI + + K
Sbjct: 450 SDPIADNKTEEGRQINRRTEIMVLTNPDEK 479
>gi|84501383|ref|ZP_00999588.1| hypothetical protein OB2597_13498 [Oceanicola batsensis HTCC2597]
gi|84390674|gb|EAQ03162.1| hypothetical protein OB2597_13498 [Oceanicola batsensis HTCC2597]
Length = 467
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATIL 103
+ K + ++ + V + IT I F S L+ +F L+ +A L
Sbjct: 321 EQVTKVAGFLEAEIDQGLVEVFQDNSTITIRIAGSNMFGSGSDRLQPEFDQPLERVAQAL 380
Query: 104 NKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ VI + H+D++ + N+ +S RA+ + L R S G A
Sbjct: 381 TETEGPVIVV-GHSDNVPIRSSRFPSNMHLSLARAESVMQKLAGLIEDPTRLQS-EGRAA 438
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFPRG 186
K PIDTNDT+ GR N+RIEI +
Sbjct: 439 KEPIDTNDTREGRARNRRIEIVLVRED 465
>gi|320194769|gb|EFW69398.1| Integral membrane protein YfiB [Escherichia coli WV_060327]
Length = 127
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 49/118 (41%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + ++ L + +Q +A L T + HTD+ G
Sbjct: 8 ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSY 67
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N ++S +RA+V+ G ++ +G KYPI +N T GR N+R+ + I
Sbjct: 68 NEVLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVIT 125
>gi|110598524|ref|ZP_01386793.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
gi|110339828|gb|EAT58334.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
Length = 170
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 16/183 (8%)
Query: 2 IKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+++ G+ + + +GC S S ++ + + Q
Sbjct: 1 MRKTVNGIFILALMVTAGCSSKSAVTSTESTGGSTSSESSALSSPAQPSTPTGYGFDKYQ 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ L + L+ + L + I+ H DS
Sbjct: 61 TGP-------------LGDVFFDFDSSTLGTEAQGQLKQNSEWLGSNTAKGALIEGHCDS 107
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + + RA K YL++ GV+++R SV + + P D N+R
Sbjct: 108 RGTAEYNLALGERRAATAKEYLVKLGVAASRLESVS-YGEERPFDAAQNDEAWAKNRRAH 166
Query: 180 IQI 182
I
Sbjct: 167 FVI 169
>gi|319796166|ref|YP_004157806.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315598629|gb|ADU39695.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 273
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 2/160 (1%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV-SRIGDMITCYIPVHVSF 82
E ++ L + + ++ S + + + + V +I
Sbjct: 112 EGTQMALSGEVGNEALRQKIVSDMANSLNPTYTIKNSLRVPVSEQITVDQALANRTIEFE 171
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ L +K +L +A IL K + +A+ HTD+ G+ +NL +SQ RA+ + +
Sbjct: 172 LGSATLTRKGRDILDEMAPILQKLTNKSVAVIGHTDNAGSRASNLALSQSRAEAV-KGYL 230
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ G P+ N T GR N+RIE ++
Sbjct: 231 VGKGIDPMTLTTSGVGPDQPVANNATDEGRSRNRRIEFRV 270
>gi|302343737|ref|YP_003808266.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
gi|301640350|gb|ADK85672.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
Length = 245
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 19/167 (11%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQ------------DTGIVVSRIGDMITCYIPVHVSF-V 83
+ + + LD A+ E ++ G+ V + + + F
Sbjct: 77 EQLETATPADLDLAKQELAEMMELPSGQTDLAGSLQQGLQVRQEPRGTVITLANDLLFAP 136
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIK 138
+ L + + ++ IA++L S I+++ HTD+ +N +S RA +
Sbjct: 137 GKAELSPQAVESIKKIASVL-AHGSANISVEGHTDASAPGAGSGFGDNWSLSLARAHAVL 195
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
LI G + + P+ NDT R N+R EI + +
Sbjct: 196 LRLIDPGGLKPDRLRLAALGDSRPLVPNDTPQRRAMNRRTEIVVLAQ 242
>gi|254475344|ref|ZP_05088730.1| OmpA/MotB [Ruegeria sp. R11]
gi|214029587|gb|EEB70422.1| OmpA/MotB [Ruegeria sp. R11]
Length = 208
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 65/176 (36%), Gaps = 17/176 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ + T++ C + E + + T G E +F +QL
Sbjct: 1 MIRYAALFGLSLTVAACSNEAGEPLDRAVFGNATTSNAAVMAG------ERDFAIQLA-- 52
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+R + + I L+ + +L A + +FP + HTD++G
Sbjct: 53 ----TRFAEDVPTTIN---FAFDSAQLDAEARAILDQQAHWIRQFPEVRFRVYGHTDAVG 105
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N + RA SYL+ RG+S +R +V F P+ + R N+R
Sbjct: 106 SNSYNKTLGLRRARAAVSYLVSRGISRSRLQAVVSFGETQPLIPTSDRERR--NRR 159
>gi|260912914|ref|ZP_05919399.1| peptidoglycan-associated lipoprotein [Pasteurella dagmatis ATCC
43325]
gi|260632904|gb|EEX51070.1| peptidoglycan-associated lipoprotein [Pasteurella dagmatis ATCC
43325]
Length = 151
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 63/179 (35%), Gaps = 36/179 (20%)
Query: 2 IKELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L + + ++ CG + +E+ + FG
Sbjct: 1 MKKLTKVLLVAGSVAVLAACGSSKKEE-----------SAAGQTFGGY------------ 37
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + +E +++ +L A L+ P+T + ++ +TD
Sbjct: 38 ---------SVQDLQQRYNTVYFGFDKYNIEGEYVQILDAHAAYLSATPATKVVVEGNTD 88
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RAD +++YL + +S + + P + N+R
Sbjct: 89 ERGTPEYNIALGQRRADAVQNYLSAK-GVQAGQVSTVSYGEEKPAVLGHDEAAYSKNRR 146
>gi|167588752|ref|ZP_02381140.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu]
Length = 224
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 66/223 (29%), Gaps = 42/223 (18%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDT----DIVNKRFGSSLDKAEDEFQM 56
M K T++ C AS + D + S + Q
Sbjct: 1 MNKLTFALALSAITLAACSSASGPTFSASELQPRDGMRTYQVDCHGIFSGPNTCMKAAQH 60
Query: 57 QLQDTGIVVSRIGDMIT------------------------------------CYIPVHV 80
D + + +
Sbjct: 61 LCGDQPVRTVDSAKALRDHADPATLVFQCGAPEAAPPAPASSPAATAPAPVEHVNLAGDA 120
Query: 81 SFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
F + L L + T +++ +TDS+G +NL +SQ RA + +
Sbjct: 121 LFATGLATLTPTARASLDALLARQGNTAFTRVSVTGYTDSVGGDASNLALSQRRAQAV-A 179
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ + R ++V G P+ +N T GR +N+R+EI +
Sbjct: 180 GYLKSHGLNARTVAVTGRGSADPVASNATAEGRASNRRVEISL 222
>gi|257469789|ref|ZP_05633881.1| putative autotransporter protein [Fusobacterium ulcerans ATCC 49185]
Length = 1198
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI-AIQSHTDSIGTLKNNLLISQERADVI 137
+ E L + +++ I+ ++K I I+ HTDSIGT + N +S++RA+ +
Sbjct: 1092 NHFSFDESSLTEDGKKVIRKISEEIDKNSKRGILTIEGHTDSIGTTEYNQKLSEKRAESV 1151
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + +G+ P+ N GR N+R++I+
Sbjct: 1152 EKEFKENLK-TEIKYETKGYGKSRPVADNKIAEGRAKNRRVDIK 1194
>gi|323177269|gb|EFZ62857.1| ompA family protein [Escherichia coli 1180]
Length = 127
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + ++ L + +Q +A L T + HTD+ G
Sbjct: 8 ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHAHMDGHTDNYGEDSY 67
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA+V+ G ++ +G KYPI +N T GR N+R+ + I
Sbjct: 68 NEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVIT 125
>gi|116326910|ref|YP_796630.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116332434|ref|YP_802152.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116119654|gb|ABJ77697.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116126123|gb|ABJ77394.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 545
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + + + + + P+L+ + + L + P I I HTD G ++
Sbjct: 427 QELEKGKSISLDSIHFALGSYEILEDSFPILENLNSYLRENPGIKIRIIGHTDLNGDYQD 486
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+++S RA+ +K YL+++G+ S R ++ G PI N+R E QI
Sbjct: 487 NIILSHNRANAVKDYLVRKGIDSGRIVT-DGKGSSEPIIPRKDPKTDYKNRRTEFQIIS 544
>gi|319790061|ref|YP_004151694.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
gi|317114563|gb|ADU97053.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
Length = 233
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 9/137 (6%)
Query: 53 EFQMQLQDTGI--VVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + L+ GI V++ G I I + E + +P++ I L +
Sbjct: 95 EIRQMLKRLGINSEVAKFGTSIRLRINTDKLFPPGEDRPYPQAIPIIMEICRKLKEL-DL 153
Query: 110 VIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+ I+ +TD+ N +S RA I I + + +S G +PI
Sbjct: 154 PLTIEGYTDNTPIHTKRFPSNWELSAARATAILRLFI-QCGYDPKKLSAAGCGPYHPIAP 212
Query: 166 NDTKVGRQNNQRIEIQI 182
N+T GR N+RIEI I
Sbjct: 213 NNTPEGRAKNRRIEIVI 229
>gi|303245612|ref|ZP_07331895.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
gi|302492875|gb|EFL52740.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
Length = 345
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ +F+P+L+ I+ P+ + ++ +TDSIGT + N+ + Q
Sbjct: 234 IVVFRSIYFDFDKYNIKPEFVPVLEEGTAIIKSKPTMKVILEGNTDSIGTPQYNMKLGQR 293
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RAD +K++ +++G+ ++R I P+ TN T GR N+R I+
Sbjct: 294 RADSVKAFFVKKGIDASR-IEAISLGLTDPVATNKTAQGRALNRRCVIK 341
>gi|312195438|ref|YP_004015499.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
gi|311226774|gb|ADP79629.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
Length = 440
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 49/150 (32%), Gaps = 9/150 (6%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
V + LD + + + L +
Sbjct: 144 VPSSPPNELDPPVAPLVCATETDPAAATPAQTSFRLP-SDVLFAFGSSTLSPSAARAIDA 202
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A + T + I +TDSIGT +N +S RA ++ + + +V GF
Sbjct: 203 LAHQITATSGT-VTIAGYTDSIGTDADNQALSLARASAVRQAIAATLGPDFTYKAV-GFG 260
Query: 159 YKYPIDTN------DTKVGRQNNQRIEIQI 182
P+ N D GR N+R+E+ +
Sbjct: 261 ETSPVAPNTHQDGSDNPDGRARNRRVELTV 290
>gi|332521405|ref|ZP_08397859.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332042804|gb|EGI79003.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 646
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + + L+ I ++ + P+ VI I+SHTDS G K N +S R
Sbjct: 527 IVINPIFFDYDKSNIRPDAAYELENIVVVMREHPNMVIKIESHTDSRGRDKYNEKLSDRR 586
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFP 184
A + YL RG++ +R S G+ ++ ++ Q N+R + I
Sbjct: 587 AKSTRDYLFSRGIAKDRIESAIGYGESQLLNKCSNGVKCSEEEHQKNRRSKFIITS 642
>gi|257126222|ref|YP_003164336.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
gi|257050161|gb|ACV39345.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
Length = 225
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 6/183 (3%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
+ + I ++ L++R+ L + + + +++ D + T +
Sbjct: 13 IIVAIGLLVAAVPLSARK-----LTTTQMRENTIRINALEIEEPGDNTVPAKKITCEDIM 67
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
I + +++ + +L ++ LN+ + I HTDS G+ N
Sbjct: 68 GPIQPIVFDEGALNFDFDKSYVKPYYNGLLGILKEFLNE-KDYNVGITGHTDSKGSDAYN 126
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ + RA +K LI+ G+SS+R + PI TN+T GR N+RIE + R
Sbjct: 127 MALGMRRAKAVKDRLIELGLSSSRIRGIDSKGESEPIATNETDEGRAQNRRIEFDVRNRD 186
Query: 187 NIK 189
K
Sbjct: 187 GEK 189
>gi|87199040|ref|YP_496297.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
gi|87134721|gb|ABD25463.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
Length = 170
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 61/185 (32%), Gaps = 19/185 (10%)
Query: 1 MIKELGLSMFIMTTIS--GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M + L ++ T+S C ++ +
Sbjct: 1 MSRPLLIAGLAAATLSLGACASKPKQLPPEPGTTTTTQTAPPPAQ--------------- 45
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
S+ M + ++ +LQ A L ++P I I+ H D
Sbjct: 46 PTGPAPGSQADFMASIISDTVNFDTDRYNIDAADQGVLQSQAAWLARYPGKAITIEGHCD 105
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR- 177
GT N+ + + RA+ K+YL+ GV R I+ + + P+ + N+R
Sbjct: 106 ERGTRDYNIALGERRANSAKNYLVSLGVDPGR-ITTVSYGKERPLALGSDEDSWAKNRRA 164
Query: 178 IEIQI 182
+ + +
Sbjct: 165 VTVTV 169
>gi|254458914|ref|ZP_05072337.1| OmpA/MotB [Campylobacterales bacterium GD 1]
gi|207084185|gb|EDZ61474.1| OmpA/MotB [Campylobacterales bacterium GD 1]
Length = 184
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/186 (11%), Positives = 62/186 (33%), Gaps = 5/186 (2%)
Query: 2 IKELGLSMFIMTTI--SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K + S +M + SGC + + + V ++ +
Sbjct: 1 MKSIVFSSIVMALLVFSGCADKKPAVDE-KVKEEVVAQEVEAVKTETVSAEDATVGESSM 59
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF-PSTVIAIQSHTD 118
+ + + + + + AT+ N + + ++ + D
Sbjct: 60 EKSDSNEMKMANLEKELSTVYFDFDKFVIRSDMESKVTNSATVANNTAKAFTVKLEGNCD 119
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ + N + +RA +K + + I++ + P+ + T+ N+R+
Sbjct: 120 EWGSDEYNFALGLKRASTVKK-ALMAEGVNETRITMVSYGESNPVCNDKTQDCWSKNRRV 178
Query: 179 EIQIFP 184
+ ++ P
Sbjct: 179 DFKLLP 184
>gi|194333585|ref|YP_002015445.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii
DSM 271]
gi|194311403|gb|ACF45798.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii
DSM 271]
Length = 153
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ L+ L+ A + P + ++ H D GT + N+ + + RA
Sbjct: 46 QLDDVFYAFDSSVLDMASQNQLKENAQWMMDNPEAAVIVEGHCDERGTNEYNIALGERRA 105
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
D KSYL+ GV ++R +V + + P D + N+R +
Sbjct: 106 DSAKSYLVNLGVDASRMQTVS-YGEERPFDPGHDEAAWAKNRRAHFVV 152
>gi|149918478|ref|ZP_01906968.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1]
gi|149820778|gb|EDM80188.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1]
Length = 258
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 58/160 (36%), Gaps = 10/160 (6%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPM 95
D + + +++ I VS + + V F E L ++ +
Sbjct: 98 DKALAAVKALQETLSKSLVEEIETGDIRVSERHGYLVVDVSDKVLFATGEATLSERGKKL 157
Query: 96 LQLIATILNKFP-STVIAIQSHTDSIGTLKN--------NLLISQERADVIKSYLIQRGV 146
L +A L P +V + HTD+ N +S RA + +L +
Sbjct: 158 LGRLAESLLTLPKDSVFQVGGHTDNQPIKSEEVLANFPTNWELSASRATNVVRFLEEECS 217
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ GF+ P+ +N GR N+RIEI + P G
Sbjct: 218 VPGARLVAAGFSEFRPVSSNKKAKGRAKNRRIEIALLPPG 257
>gi|110639367|ref|YP_679576.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110282048|gb|ABG60234.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 712
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + + L + L P + I HTD G NL +SQ RAD IKSY
Sbjct: 589 FDNNSSKILPEMEGDLDKVVDFLVDHPQIKLVISGHTDGSGDAAANLRLSQARADAIKSY 648
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTND-TKVGRQNNQRIEIQIF 183
++++G I G+ + PI + ++ R+ N+R+E ++
Sbjct: 649 IMEKGNIDESRIEAVGYGNQKPIIQQEVSESDRKINRRVEFELI 692
>gi|62178845|ref|YP_215262.1| hypothetical protein SC0275 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62126478|gb|AAX64181.1| putative outer membrane protein, OmpA family [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|322713295|gb|EFZ04866.1| Type IV / VI secretion system, DotU [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 434
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 10/186 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
G+++ M T+ G + + V + + + + + ++
Sbjct: 250 GIALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPPVPVHKLRLKILLANEIARGL 309
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V F + + P++ A + + + + HTDS
Sbjct: 310 LTVDEDDQHSRVVFRGGAMFVPGQKTVSDAIRPVINKAAREIARVGGA-VTVTGHTDSQP 368
Query: 122 TLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
S++RA + + L GV + R + + G P+ N +K GR N+R
Sbjct: 369 IHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGR-VHIVGKGDTVPVADNGSKAGRAKNRR 427
Query: 178 IEIQIF 183
+EI +
Sbjct: 428 VEILVV 433
>gi|312965520|ref|ZP_07779752.1| ompA family protein [Escherichia coli 2362-75]
gi|312289940|gb|EFR17828.1| ompA family protein [Escherichia coli 2362-75]
Length = 127
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 49/118 (41%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + ++ L + +Q +A L T + HTD+ G
Sbjct: 8 ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASIGLTHARMDGHTDNYGEDSY 67
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N ++S +RA+V+ G ++ +G KYPI +N T GR N+R+ + I
Sbjct: 68 NEVLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVIT 125
>gi|167576592|ref|ZP_02369466.1| hypothetical protein BthaT_00570 [Burkholderia thailandensis TXDOH]
Length = 433
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 53/135 (39%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V + E + + P+L +A + + +
Sbjct: 300 LKNEIARGLLTVDEDDTRSVVVFRGDSMFRSGESRVLPEIEPVLDKVAREVARVGG-RVT 358
Query: 113 IQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ H+D+ + NNL++S++RA + ++ + + I G P+ N T
Sbjct: 359 VTGHSDNQPIRRADIPNNLVLSEKRAAYVAQ-ILVQRGTPADHIRSEGRGDAQPVAENTT 417
Query: 169 KVGRQNNQRIEIQIF 183
GR N+R+EI +
Sbjct: 418 PAGRSRNRRVEIAVT 432
>gi|271963004|ref|YP_003337200.1| OmpA/MotB domain-containing protein [Streptosporangium roseum DSM
43021]
gi|270506179|gb|ACZ84457.1| OmpA/MotB domain protein [Streptosporangium roseum DSM 43021]
Length = 193
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 53/183 (28%), Gaps = 6/183 (3%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
+ + + ++G +A + L + +
Sbjct: 11 VLVASLLAGGLVAGAAPAVWASPEPPADATAPVEDLLLPVDDLLAEVDSLDGSESETKQG 70
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNL 127
+ + + L K L+ +A + + V+ I HTD GT N
Sbjct: 71 ETVTLALTSDVLFALDRAVLTAKAAARLRGVAGRVKTESAGGVVKIVGHTDDQGTDAYND 130
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQI 182
+S RA ++ L + G + P N + R N+R+EI
Sbjct: 131 RLSLRRAQAVQEGLRALLSGQSVTFEATGLGERQPKVPNVVDGRPVEENRARNRRVEIVF 190
Query: 183 FPR 185
+
Sbjct: 191 TAK 193
>gi|315125307|ref|YP_004067310.1| outer membrane protein; signal peptide [Pseudoalteromonas sp.
SM9913]
gi|315013820|gb|ADT67158.1| putative outer membrane protein; signal peptide [Pseudoalteromonas
sp. SM9913]
Length = 354
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 63/160 (39%), Gaps = 4/160 (2%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDK-AEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A + + ++ D DK A + G + ++ +
Sbjct: 185 APQPEPEIVPVPVALADTDKDSIPDVDDKCANTPMTDAVGSDGCTLYEDTEVTVSLL--V 242
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
++ + +++L + +AT L ++P T + ++ HT ++G N +S++RAD +
Sbjct: 243 TFPNNDSSVSQQYLNDIDEVATFLKEYPDTTVLLEGHTSAVGKASYNKWLSKKRADAVAK 302
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
LI + I+ G + + +T N+R+E
Sbjct: 303 KLIA-DGIAEDRITTAGLGEERLKNEANTAKAHAENRRVE 341
>gi|297538022|ref|YP_003673791.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
gi|297257369|gb|ADI29214.1| OmpA/MotB domain protein [Methylotenera sp. 301]
Length = 616
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 6/134 (4%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
++ + V + + + P + +++ P+L L ++ +
Sbjct: 482 IAKPVVSAVEPAKVEVKPMANKVV---PDVQFETNSAKIKEISYPVLDNAINTLKEWGDS 538
Query: 110 VIAIQSHTDSI--GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ + HTD N +S++RA + I + + +S +G+ Y PI ND
Sbjct: 539 NVEVGGHTDQRDTSKADYNQRLSEKRAKAVMD-YIVKKGIDAKRLSAKGYGYSKPIAEND 597
Query: 168 TKVGRQNNQRIEIQ 181
K G N+R+E+
Sbjct: 598 PKEGNLVNRRVELV 611
>gi|238752234|ref|ZP_04613714.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia rohdei ATCC 43380]
gi|238709502|gb|EEQ01740.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia rohdei ATCC 43380]
Length = 153
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 52/179 (29%), Gaps = 27/179 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+G + ++GC E LQ+ G
Sbjct: 1 MGFIALCLLALAGCQAKPS-------------------------GLTAEQIAALQEQGFK 35
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
++ G + L ++ I L+ + + HTDS G
Sbjct: 36 LTDNGWEFGL-ANKVLFDTDIRELNSTGKQTVESIGRALHNVGINHLRVDGHTDSTGEDG 94
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA + + I VRG P N T GR N+R+ I +
Sbjct: 95 YNQQLSYQRAAAVAD-SLSASGIPRARIDVRGRGELEPAADNKTAQGRAENRRVAIIVT 152
>gi|297564278|ref|YP_003683251.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848727|gb|ADH70745.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 534
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 57/149 (38%), Gaps = 8/149 (5%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQ 97
N+R + E Q + +R GD + V F L + +++
Sbjct: 211 ANRRPDADAVADEGWVQSFVDSEIASTTRDGDREIISLHSDVMFEFDRSDLTSEAEDVVR 270
Query: 98 LIATILNKF---PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
AT L + VI + HTDSIG N +S +RA+ ++ L + ++ + V
Sbjct: 271 RAATSLARNVDPDEPVITVIGHTDSIGDDAYNDNLSVQRAESVRDLLAEELG-TDYTLEV 329
Query: 155 RGFAYKYPIDTN---DTKVGRQNNQRIEI 180
G PI D R N+R+E
Sbjct: 330 EGRGEHEPIAREGGPDDDEARARNRRVEF 358
>gi|163739042|ref|ZP_02146455.1| OmpA family protein [Phaeobacter gallaeciensis BS107]
gi|161387847|gb|EDQ12203.1| OmpA family protein [Phaeobacter gallaeciensis BS107]
Length = 183
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 47/134 (35%), Gaps = 6/134 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D AE + G V R GD+ + + L+
Sbjct: 53 DGAEGFMTPHVTRDGKPVCRRGDICGVMPSDQFFATNRHRISAAGQQRLRE---FFQTAN 109
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I HTDS + + N+ +SQ RA+ + R + RG+ + P ND
Sbjct: 110 ARSFIITGHTDSRASDEYNMRLSQRRANAVAKVGQS---VGARILEARGYGERDPRVPND 166
Query: 168 TKVGRQNNQRIEIQ 181
+ N+R+EI
Sbjct: 167 SAANMAQNRRVEII 180
>gi|328470797|gb|EGF41708.1| hypothetical protein VP10329_08362 [Vibrio parahaemolyticus 10329]
Length = 430
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 7/158 (4%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLE 89
+ +V + ++ ++ + V + D + + + +
Sbjct: 272 TPAVSNPMVESKSAPIAERISMYLATEIGKDLVTVEALQDRVRISLRAQDLFESGSASVV 331
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRG 145
P++ +A L I I HTD +N +S RA + LI
Sbjct: 332 AYIQPVISKVARTLEATQG-KIIITGHTDDRPIFTSKYPSNWHLSLARATSLSEQLIANS 390
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R I G P+ ND++ R N+RIEI +
Sbjct: 391 ALKGRVI-PEGLGDARPLVENDSEENRAMNRRIEIDLI 427
>gi|162454745|ref|YP_001617112.1| OmpA-domain-containing protein [Sorangium cellulosum 'So ce 56']
gi|161165327|emb|CAN96632.1| OmpA-domain outer membrane protein [Sorangium cellulosum 'So ce
56']
Length = 129
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHT 117
GD I P + + + + +L +A IL P + ++ HT
Sbjct: 5 PAAPAEAVIEGDRIKIARP-IFYDLDKDEIRPESFSVLDAVANILRTHPEITALTVEGHT 63
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G++++N+ +S+ RA+ + YL+QRGV++ ++ G+ P+ + + R N+R
Sbjct: 64 DNQGSVEHNIKLSERRANAVVRYLVQRGVATP--MTAPGYGAGAPLCFTNDEGCRAMNRR 121
Query: 178 IEIQIFPR 185
+E +I +
Sbjct: 122 VEFRIKSK 129
>gi|154508361|ref|ZP_02044003.1| hypothetical protein ACTODO_00858 [Actinomyces odontolyticus ATCC
17982]
gi|153797995|gb|EDN80415.1| hypothetical protein ACTODO_00858 [Actinomyces odontolyticus ATCC
17982]
Length = 177
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 2/124 (1%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + +T V L + +L +A+ K + +++ HT
Sbjct: 53 IDGAVATAEQPDATVTTLSGDVNFEVDSDQLTARAKEVLDSLASEWTKAKPSTVSVMGHT 112
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
DS+ +NL +S+ RA + YL + + I+ G PI N+T GR N+R
Sbjct: 113 DSVADDAHNLDLSKRRAKAVGDYLKGKVPGLS--ITTDGKGEAEPIGDNETDEGRAQNRR 170
Query: 178 IEIQ 181
+EI+
Sbjct: 171 VEIR 174
>gi|311746464|ref|ZP_07720249.1| putative flagellar motor protein MotB [Algoriphagus sp. PR1]
gi|126575359|gb|EAZ79691.1| putative flagellar motor protein MotB [Algoriphagus sp. PR1]
Length = 282
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 6/173 (3%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A ++ K+ ++ + D VN +L + E + ++ + + ++ + +
Sbjct: 106 AKVDQAKLAEAQTLE-DSVNLAVEYNLKQNITETTVDGEEDDVQIDIDQTVVMISVSDKL 164
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERAD 135
F + KK P+LQ +A ++N PS + I+ HTD S G L++N +S +RA
Sbjct: 165 LFNTGSYRINKKADPLLQKLAEVINAEPSLQVMIEGHTDPRSISTGVLQDNWDLSVKRAT 224
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
I L + + + G + P+ NDT N+R I + P ++
Sbjct: 225 SIVRKLQENYSVAPEKMIAAGRSSYMPLVENDTPENMAINRRTRIVLIPDLDM 277
>gi|189424872|ref|YP_001952049.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ]
gi|189421131|gb|ACD95529.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ]
Length = 185
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 61/188 (32%), Gaps = 10/188 (5%)
Query: 2 IKELGLSMFIMTTI-----SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+K + S ++ I SGC KK + + + A + +
Sbjct: 1 MKNVTRSFAVILAINVIIVSGCAKEDVVKKDEPMAQQQTLQQQTAQQPL---PAAPKSEP 57
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL-NKFPSTVIAIQS 115
+ S + L + ML A L + I I+
Sbjct: 58 AKPTDQLQNSTAKASAAVSLQTVYFDFDRSDLRQDSRDMLTKNAQALMKDLVDSKIKIEG 117
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
H D G+ + NL + RA + +YLI GV +R IS F + P + N
Sbjct: 118 HCDERGSDEYNLALGDRRAKAVATYLITLGVKQDR-ISTVSFGKEKPAMQGSDETAWSKN 176
Query: 176 QRIEIQIF 183
+R E I
Sbjct: 177 RRAEFVIV 184
>gi|332666217|ref|YP_004449005.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332335031|gb|AEE52132.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 595
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+++ + L + + + HTD+IG NL +S+ RA IK++
Sbjct: 490 FASGSSEFTPSARAVMEQLFNDLVIASNLKVEVHGHTDNIGDPAANLSLSERRAFAIKTW 549
Query: 141 LIQR--GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L + +S+ P+ +NDT GR N+R+EI
Sbjct: 550 LENKSANNFPEGRVSIFSHGASNPVASNDTPAGRAKNRRVEII 592
>gi|54302262|ref|YP_132255.1| putative outer membrane protein [Photobacterium profundum SS9]
gi|46915683|emb|CAG22455.1| putative outer membrane protein [Photobacterium profundum SS9]
Length = 196
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 77/191 (40%), Gaps = 11/191 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K ++ + T+ GC + E + + D N ++ DK D + D
Sbjct: 1 MKRT-VTGLLALTLFGCSVTVEEP-PIAEQSQDQRDFDNDGVINARDKCADTPHSAIVDN 58
Query: 62 ---GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I V+R + + + + FL +Q +A L +P T I ++ +
Sbjct: 59 DGCPIRVNREEENDV----RVLFANDSAAIPEAFLSEIQRMADFLEIYPETYIELKGYAS 114
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+G + N+ +S+ RA ++ LI + + I GF PI ++ ++R+
Sbjct: 115 PVGNAEYNIGLSKRRATKVREQLIAE-GVAPQRIKTIGFGDAEPIAAESSEATNTLSRRV 173
Query: 179 EIQIF-PRGNI 188
++ +G++
Sbjct: 174 VARVIGSKGSL 184
>gi|57169060|ref|ZP_00368187.1| fibronectin-binding protein [Campylobacter coli RM2228]
gi|57019518|gb|EAL56209.1| fibronectin-binding protein [Campylobacter coli RM2228]
Length = 332
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
E+ K ++K S E+ G ++ G T Y+ H F
Sbjct: 179 EQTKEVVNKPQVVTPAPAPVVSQSKCPEE------PREGALLDENGCEKTIYLEGHFDF- 231
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+V + F ++ IA IL++ ++ HTD+IG+ N +S+ RA+ + ++
Sbjct: 232 DKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAKE-LE 290
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ I G+ P +N+TK GR +N+R++
Sbjct: 291 KFGVDKSRIQTVGYGQDKPRSSNETKEGRADNRRVD 326
>gi|189405293|ref|ZP_02814514.2| OmpA family protein [Escherichia coli O157:H7 str. EC869]
gi|191169055|ref|ZP_03030818.1| OmpA family protein [Escherichia coli B7A]
gi|193064020|ref|ZP_03045105.1| OmpA family protein [Escherichia coli E22]
gi|194439333|ref|ZP_03071411.1| OmpA family protein [Escherichia coli 101-1]
gi|256019576|ref|ZP_05433441.1| putative outer membrane lipoprotein [Shigella sp. D9]
gi|301026824|ref|ZP_07190226.1| OmpA family protein [Escherichia coli MS 196-1]
gi|332280700|ref|ZP_08393113.1| outer membrane lipoprotein [Shigella sp. D9]
gi|43146|emb|CAA25961.1| unnamed protein product [Escherichia coli]
gi|189370879|gb|EDU89295.1| OmpA family protein [Escherichia coli O157:H7 str. EC869]
gi|190900896|gb|EDV60682.1| OmpA family protein [Escherichia coli B7A]
gi|192929255|gb|EDV82864.1| OmpA family protein [Escherichia coli E22]
gi|194421695|gb|EDX37704.1| OmpA family protein [Escherichia coli 101-1]
gi|299879570|gb|EFI87781.1| OmpA family protein [Escherichia coli MS 196-1]
gi|315615303|gb|EFU95938.1| ompA family protein [Escherichia coli 3431]
gi|323159124|gb|EFZ45117.1| ompA family protein [Escherichia coli E128010]
gi|323184520|gb|EFZ69894.1| ompA family protein [Escherichia coli 1357]
gi|332103052|gb|EGJ06398.1| outer membrane lipoprotein [Shigella sp. D9]
gi|332344474|gb|AEE57808.1| outer membrane protein OmpA [Escherichia coli UMNK88]
Length = 127
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + ++ L + +Q +A L T + HTD+ G
Sbjct: 8 ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSY 67
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA+V+ G ++ +G KYPI +N T GR N+R+ + I
Sbjct: 68 NEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVIT 125
>gi|327334842|gb|EGE76553.1| putative outer membrane protein A [Propionibacterium acnes
HL097PA1]
Length = 368
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 56/147 (38%), Gaps = 3/147 (2%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D+ ++ + V++ I + + ++ ++
Sbjct: 221 DLAGVDVSKFVNALVTTTGDASDASRERVTKESMKIDLDA-SVLFDLDSDVVKPAGRQII 279
Query: 97 QLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
A L S I + +TDS G+ +NL +S+ RA + L + ++
Sbjct: 280 DRTAKQLVARKVSGKIEVTGYTDSSGSASHNLDLSRRRAASVAKVLGSQLSKGITLVTA- 338
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ +ND++ GR+ N+R+ I +
Sbjct: 339 GKGEADPVASNDSEAGRRLNRRVTITV 365
>gi|224438536|ref|ZP_03659456.1| hypothetical protein HcinC1_11101 [Helicobacter cinaedi CCUG 18818]
gi|313144962|ref|ZP_07807155.1| membrane-protein map18 [Helicobacter cinaedi CCUG 18818]
gi|313129993|gb|EFR47610.1| membrane-protein map18 [Helicobacter cinaedi CCUG 18818]
Length = 157
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 29/183 (15%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + + + GC + + + + +D
Sbjct: 1 MKKYIAIGVLAALMSVGCS-------EPEAADTGSGTAASSGQDNFVD-----LAADTAA 48
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
V + + + + L+ L + ++ HTDS
Sbjct: 49 GYAKV--------------LFDFDKYDIRQDMEDGLEKSVAALKST-GAKVVLEGHTDSY 93
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQRIE 179
G+ N + +RA+ +K+ L RGVS+++ +V + P + DT Q N+R+E
Sbjct: 94 GSDAYNYALGTKRANAVKNALTTRGVSASQIKTVS-YGESKPACTSGDTPECNQENRRVE 152
Query: 180 IQI 182
++
Sbjct: 153 FKL 155
>gi|285803774|pdb|3LDT|A Chain A, Crystal Structure Of An Outer Membrane Protein(Ompa)from
Legionella Pneumophila
Length = 169
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 1/154 (0%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
L + V D + + V S
Sbjct: 5 GTLIGAAAGGTVGLVASIYRDSKRKIIRDLQKQDIQYVEYGDTRTLIIPTDKYFXFSSPR 64
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L + P L + +LN +P + I + TD++G+ + +SQ +A+ ++L
Sbjct: 65 LNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSRSHKRKLSQAQAETXXTFLWAN-GI 123
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + G+ K I N G N+RIEIQ
Sbjct: 124 AAKRLKAEGYGDKNAISDNAIIHGSAQNRRIEIQ 157
>gi|188533999|ref|YP_001907796.1| OmpA family protein [Erwinia tasmaniensis Et1/99]
gi|188029041|emb|CAO96909.1| OmpA family protein [Erwinia tasmaniensis Et1/99]
Length = 407
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 21/191 (10%), Positives = 57/191 (29%), Gaps = 16/191 (8%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIV----------NKRFGSSLD--KAEDEFQ 55
+ +T + GC + + ++ + +R + D
Sbjct: 201 ACLCVTALIGCTIFTALNWQLGRSAEPLLQQIWQTPLPQLPGGQRTAAPQDLFDLRQRLS 260
Query: 56 MQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV---I 111
+ + V+ +P + L + ++ +A+ + T+ +
Sbjct: 261 DLIGSHRLDVTDGDYGNKIILPADSLFTYQGAALTPEGRALVARVASAMESRKGTLLIGV 320
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ + S +A+ I + ++Q + G N++
Sbjct: 321 YTDNRLPHSSPFTSTYAYSAAQAEAISNMMVQLIAHPCITVRAEGRGDSRGRVPNNSAEN 380
Query: 172 RQNNQRIEIQI 182
R N+R+EI +
Sbjct: 381 RARNRRVEITL 391
>gi|153952340|ref|YP_001398779.1| fibronectin-binding protein [Campylobacter jejuni subsp. doylei
269.97]
gi|152939786|gb|ABS44527.1| fibronectin-binding protein [Campylobacter jejuni subsp. doylei
269.97]
Length = 319
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ G T + H F + + F ++ IA +L++ ++ HTD+I
Sbjct: 197 GGALLDENGCEKTISLEGHFDF-DKTTINLTFQEKIKEIAKVLDENERYDTILEGHTDNI 255
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ N +S+ RA + + +++ I G+ P +N+TK GR +N+R++
Sbjct: 256 GSRAYNQKLSERRAKSVANE-LEKYGVEKSRIKTVGYGQDNPRSSNNTKEGRADNRRVD 313
>gi|291276590|ref|YP_003516362.1| putative flagellar motor protein [Helicobacter mustelae 12198]
gi|290963784|emb|CBG39619.1| putative flagellar motor protein [Helicobacter mustelae 12198]
Length = 258
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 7/168 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
V + D ++ + Q+ G V+ +I IT +P +
Sbjct: 72 PPNPGDVTDQEDGDKAQQSQDSNAVKTVENIVQLEQIIQEGGVLEQIEHGITLQLPSDLL 131
Query: 82 F-VSEVFL-EKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIK 138
F L + L+ +A ++ KFP I ++ +TD+ N+ + +
Sbjct: 132 FDNGSAELANDEMKDYLRNMANVIKKFPPQVSINVKGYTDNAPLPPNSPYKNHYLLAAAR 191
Query: 139 SYLIQ----RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + + + +S + PI N+T R N R+EI +
Sbjct: 192 AMAVMNVLIQQGVNQKQLSFTSYGKNSPIAPNNTPANRAKNNRVEIYL 239
>gi|192361426|ref|YP_001981532.1| outer membrane protein [Cellvibrio japonicus Ueda107]
gi|190687591|gb|ACE85269.1| outer membrane protein [Cellvibrio japonicus Ueda107]
Length = 154
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 64/180 (35%), Gaps = 32/180 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK+ +M+ + GC AS++ + S + E +
Sbjct: 6 IKQGLTFAVVMSFLVGCSGASKKPVEETTQTSTAPVQQ---------QVEAQLA------ 50
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
V + L + +L A L S + ++ H D G
Sbjct: 51 ---------------HVVYFDFDQYALTAESRAVLLAHADKLKG-ASVAVRLEGHADERG 94
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + N+ + ++RA+ ++ +L+ + S + V F + P+ + N+R+EI+
Sbjct: 95 SREYNMALGEKRANAVRDFLVTQ-GVSGSSLEVVSFGEEQPVALGHDESAWSQNRRVEIK 153
>gi|91224536|ref|ZP_01259798.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
gi|269968325|ref|ZP_06182346.1| outer membrane protein, putative [Vibrio alginolyticus 40B]
gi|91190878|gb|EAS77145.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
gi|269827061|gb|EEZ81374.1| outer membrane protein, putative [Vibrio alginolyticus 40B]
Length = 204
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 71/195 (36%), Gaps = 8/195 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + + +F + ++ E + + N I + + +
Sbjct: 1 MKPVKI-LFALGMLAITQHVVAEDEYEYRPVPNAEQIADLQDDDNDGVINARDMCPGTPE 59
Query: 62 GIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G V G + + + F ++ ++ L ++P+T I + +
Sbjct: 60 GSEVDNDGCGEYIKASDNMQVRILFANDSDEINPVFRRQVRELSDFLKEYPTTSIELHGY 119
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+G K+N +S+ RA ++ L+ + +R + + GF + +V N+
Sbjct: 120 ASKVGGSKHNQDLSERRARNVREALLSYDIEPSR-VRIVGFGDTHLAQQGTDEVSHALNR 178
Query: 177 RIEIQIFP-RGNIKK 190
R+ + +G IK+
Sbjct: 179 RVTASVVGYKGEIKR 193
>gi|83716132|ref|YP_438328.1| hypothetical protein BTH_II0126 [Burkholderia thailandensis E264]
gi|167614770|ref|ZP_02383405.1| hypothetical protein BthaB_00705 [Burkholderia thailandensis Bt4]
gi|257141357|ref|ZP_05589619.1| hypothetical protein BthaA_19439 [Burkholderia thailandensis E264]
gi|83649957|gb|ABC34021.1| OmpA domain protein [Burkholderia thailandensis E264]
Length = 433
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 53/135 (39%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V + E + + P+L +A + + +
Sbjct: 300 LKNEIARGLLTVDEDDARSVVVFRGDSMFRSGESRVLPEIEPVLDKVAREVARVGG-RVT 358
Query: 113 IQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ H+D+ + NNL++S++RA + ++ + + I G P+ N T
Sbjct: 359 VTGHSDNQPIRRADIPNNLVLSEKRAAYVAQ-ILVQRGTPADHIRSEGRGDAQPVAENTT 417
Query: 169 KVGRQNNQRIEIQIF 183
GR N+R+EI +
Sbjct: 418 PAGRSRNRRVEIAVT 432
>gi|229098968|ref|ZP_04229903.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29]
gi|229117997|ref|ZP_04247357.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3]
gi|228665446|gb|EEL20928.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3]
gi|228684466|gb|EEL38409.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29]
Length = 233
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 64/175 (36%), Gaps = 7/175 (4%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S L S + KK ++ + + + + + +
Sbjct: 55 LSANSLESEQIKKNA--EAEVKQQEMNELKAVQKGIDKYIEEKQLSSSFKTDLTEKGLMV 112
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLI 129
I +V F + ++ + L + + ++ +L I + HTD++ +N +
Sbjct: 113 TILENVLFDSGKADVKLESLGIAKEMSNLLVSASPREITVSGHTDTVPIANAQFASNWEL 172
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S +RA L+Q S G+ I NDT G+ N+R+E+ I P
Sbjct: 173 STQRAVNFMQVLLQNKDLQPGKFSAIGYGEYRSIAQNDTPEGKAKNRRVEVFILP 227
>gi|261342404|ref|ZP_05970262.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
gi|288315039|gb|EFC53977.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
Length = 451
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 14/189 (7%)
Query: 7 LSMFIMTTISGCG-------LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
LS + L SR + V + K + +++
Sbjct: 264 LSALCAGVLVASSFLWCKFWLLSRTDGITNGIYAMQDLSVPVAQPAMRLKLAVLLRNEIR 323
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ V + F+S ++ + + +++ IA+ + + + I HTD
Sbjct: 324 QQLLSVDESQKQSKVVLKGDALFLSGSVRVQPEMVKVIERIASEVRRVNG-DVVIVGHTD 382
Query: 119 SIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ + L S++RA + Y I + VRG P+ ++ T GR
Sbjct: 383 ATPISRPGLPNNVVLSEKRAAEVAQYFISA-GLPESKVKVRGVGSSQPVASDATAQGRAK 441
Query: 175 NQRIEIQIF 183
N+R+E +
Sbjct: 442 NRRVEFFVT 450
>gi|90021170|ref|YP_526997.1| hypothetical protein Sde_1523 [Saccharophagus degradans 2-40]
gi|89950770|gb|ABD80785.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 469
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 7/139 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH-VSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ ++ + V + + + + + F P+L IA L P
Sbjct: 319 ELRALLTPEIDRGILSVQDYPTHTSIVLHNQELFTSGNINITPSFEPILDKIAKALEAIP 378
Query: 108 STVIAIQSHTDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
I + HTD+ +N +S RA + YL +R + G PI
Sbjct: 379 G-RIIVSGHTDNESIRTPRYPSNWHLSLARASEVVKYLAASADLKSRLL-PEGRGANEPI 436
Query: 164 DTNDTKVGRQNNQRIEIQI 182
+NDT GR +N+R+ I +
Sbjct: 437 MSNDTAAGRAHNRRVVIDV 455
>gi|91216576|ref|ZP_01253542.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
gi|91185370|gb|EAS71747.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
Length = 759
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + + LQ I + +P+ I ++SHTDS + N ++S +RA +
Sbjct: 546 YFDLDKFQIRPDAEVELQKIIVAMKSYPNLRIDVRSHTDSRAGDEYNQILSNKRAKATIN 605
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
Y+I++ S+ IS RG+ ++ ++ N+R E I
Sbjct: 606 YIIEKSGISSERISGRGYGESQLVNKCSNGIDCSESEHALNRRAEFIIL 654
>gi|118588929|ref|ZP_01546336.1| hypothetical protein SIAM614_12793 [Stappia aggregata IAM 12614]
gi|118438258|gb|EAV44892.1| hypothetical protein SIAM614_12793 [Stappia aggregata IAM 12614]
Length = 533
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 74/192 (38%), Gaps = 12/192 (6%)
Query: 5 LGLSMFIMT---TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD- 60
+ L + + + ++G A + L + + D D QL
Sbjct: 339 VTLMLLLSSGSEVVAGRASALYPSGPIELAREGYQPKPPPTPPPAEDATIDTVSAQLAGL 398
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G+ +S+ G I + V+ L +F +++ ++ L++ I + HTDS
Sbjct: 399 EGLEISQAGPAIMLRMRAQ-FDVAAATLRPEFQLLVEQVSQTLDQV-DGEILVVGHTDSD 456
Query: 121 GTLKNN-----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
N +S ERA + + + + R + V G PI N +K G+ N
Sbjct: 457 PIRNNPRFPTNWHLSVERAKAVAAVMESVLQTPGR-VQVEGRGADEPIAPNTSKEGKALN 515
Query: 176 QRIEIQIFPRGN 187
+R+E+ + P N
Sbjct: 516 RRVEVFLKPPAN 527
>gi|325286251|ref|YP_004262041.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324321705|gb|ADY29170.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 701
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++ + L + ++ ++P+ I I+SHTD G N +S +R
Sbjct: 585 LKTEKIFFDFDKSYIRQDASVELDKLVDVMTEYPNMKIKIESHTDVRGNNAYNKYLSDKR 644
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-----NDTKVGRQNNQRIEIQIF 183
A + Y+I +G+ NR IS G+ + I+ N ++ Q N+R E I
Sbjct: 645 AKSTRKYIISKGIDENRIISAIGYGEEQLINGCEDGVNCSREKHQENRRSEFIIV 699
>gi|260772528|ref|ZP_05881444.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
metschnikovii CIP 69.14]
gi|260611667|gb|EEX36870.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
metschnikovii CIP 69.14]
Length = 179
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/181 (12%), Positives = 59/181 (32%), Gaps = 8/181 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ ++ + + + + +
Sbjct: 6 VLKGLLIALPVLAITACSSSDDAASASGSQTNQTTSGSAGGVDTTVVSPIGEY------- 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + + + ML A L+K PS + ++ H D
Sbjct: 59 GQLSEQELKEQALRETQTIYFAFDNATIARSYEEMLAAHAAYLSKNPSLKVTVEGHADER 118
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ + ++ IS+ + + P+ T+ N+R +
Sbjct: 119 GTPEYNIALGERRANAVAK-YLEALGVQANQISIVSYGEEKPLVLGQTEEAYAKNRRAVL 177
Query: 181 Q 181
Sbjct: 178 V 178
>gi|254564208|ref|YP_003071303.1| Outer membrane lipoprotein omp16 [Methylobacterium extorquens DM4]
gi|254271486|emb|CAX27501.1| Outer membrane lipoprotein omp16 precursor [Methylobacterium
extorquens DM4]
Length = 170
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Query: 69 GDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
I V F S+ L L A+ L ++P I+ H D GT + N
Sbjct: 51 AQDFVVNIGDRVFFESDSTDLTPTATATLDKQASWLQRYPRYSFLIEGHADERGTREYNY 110
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ RA ++ YL RG+S++R +V + + P+ + N+R
Sbjct: 111 SLGARRAQTVQDYLASRGISASRMRTVS-YGKERPVAVCNDISCWSQNRR 159
>gi|78223039|ref|YP_384786.1| OmpA/MotB [Geobacter metallireducens GS-15]
gi|78194294|gb|ABB32061.1| OmpA/MotB [Geobacter metallireducens GS-15]
Length = 523
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 2/145 (1%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
S+D Q+ G + + P + L + + +A ++
Sbjct: 379 YSVDVKGQNVQVASARDGDIADSMKVYRKFRFPDVTFDFDQWSLSAEGKKSISEVAELVR 438
Query: 105 KFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
K V + + +TD+IG+ N+ +S +RA + SYL+ R I ++G P+
Sbjct: 439 KDTKWVYLRVDGYTDNIGSTDYNMDLSLKRAVSVASYLVAREGIDAAKIFIKGLGKSKPL 498
Query: 164 DTNDTKVGRQNNQRIEIQ-IFPRGN 187
N T GR+ N+R EI + P+ +
Sbjct: 499 ADNATSDGRKLNRRCEILFLIPKES 523
>gi|328542425|ref|YP_004302534.1| outer membrane lipoprotein [polymorphum gilvum SL003B-26A1]
gi|326412172|gb|ADZ69235.1| Probable outer membrane lipoprotein [Polymorphum gilvum
SL003B-26A1]
Length = 155
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 52/169 (30%), Gaps = 24/169 (14%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
++GC + + + I + +
Sbjct: 1 MLAGCSSVDTLTTPDVTNAAAAGFVD-----------------------IRPGSEEEFMI 37
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
L + + A L P ++ IQ H D G+ N +S +R
Sbjct: 38 NVGRRIFFDRGSAELTETARMTIDKQAAWLRANPRWLVKIQGHADDPGSEAANKALSTKR 97
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A+ ++ L+ GV R ++G+ + P+ D N+R+ + +
Sbjct: 98 AEAVRDALVALGVDGKRMW-IKGYGIERPVTDCDELTCHVQNRRVVVNL 145
>gi|239934074|ref|ZP_04691027.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 205
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 65/183 (35%), Gaps = 9/183 (4%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
L T++ C + ++ + + K D + + +V +
Sbjct: 12 LLALTALTMTLCTGTRVQNAAASPYEDGSGLALRSGATLAPPKILDLGSDPVGISRVVGN 71
Query: 67 RIGDMITCYIPVHV---------SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
R G V L + IA + + +T + + T
Sbjct: 72 RDGAERRTDTNTEVTYELQAAVLFAKDSGRLSDSARSRIAAIAREIEQRAATRVRVTGFT 131
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D++G+ + ++S +RAD ++ L S GF + P+ +N T+ R+ N+R
Sbjct: 132 DNLGSSVHGDILSTQRADAVRDVLTDDLRSEAVTFETHGFGERRPVASNATEASRRENRR 191
Query: 178 IEI 180
+EI
Sbjct: 192 VEI 194
>gi|156974662|ref|YP_001445569.1| hypothetical protein VIBHAR_02380 [Vibrio harveyi ATCC BAA-1116]
gi|156526256|gb|ABU71342.1| hypothetical protein VIBHAR_02380 [Vibrio harveyi ATCC BAA-1116]
Length = 204
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 68/197 (34%), Gaps = 12/197 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + + + ++ + K ++ + + D + + T
Sbjct: 1 MKATKILLALGVMLT--THHVTAEDKYEYTETPKAEQIADLQDDDNDGVINA-RDLCPGT 57
Query: 62 GIVVSRIGDMITCYIPV-------HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
D YI + + F ++ ++ L +PST I +Q
Sbjct: 58 PATSEIDNDGCGEYIKSSEKMEVRVLFANDSDEIVPVFRRQIRELSEFLKGYPSTSIELQ 117
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ IG ++NL +S+ RA+ + + + + + GF + + +V
Sbjct: 118 GYASKIGGAEHNLDLSKRRANNV-RAALLGYGIESDRVRIVGFGDTHLAEQGTDEVSHAL 176
Query: 175 NQRIEIQIFP-RGNIKK 190
N+R+ + +G I K
Sbjct: 177 NRRVTASVIGYKGEITK 193
>gi|32266001|ref|NP_860033.1| flagellar motor protein MotB [Helicobacter hepaticus ATCC 51449]
gi|32262050|gb|AAP77099.1| flagellar motor component MotB [Helicobacter hepaticus ATCC 51449]
Length = 251
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 75/206 (36%), Gaps = 33/206 (16%)
Query: 6 GLSMFIMTTIS--GCGLASREKKK---------------------VFLHKSNDTDIVNKR 42
LS+ + I+ S + ++T+ +
Sbjct: 23 FLSLLLALFIALWAISSTSNADSELLKTEFVKIFDFTLTSPLNSDQDDVNDSETENESGA 82
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM-LQLIA 100
S E + ++ GI + ++ ++ +P ++ F + + + LQ ++
Sbjct: 83 ISESSSVTSAEIEQMAEEGGI-LEQMEMGMSLRLPSNLFFDSGSAEINNSDVFLYLQRMS 141
Query: 101 TILNKFPST-VIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
I+ K P I ++ +TD+ K+N +S R+ + LI + S IS
Sbjct: 142 AIIKKLPDYVKIDVRGYTDNAPLPVGSRYKDNYELSSARSLSVMKNLI-KNGISPERISF 200
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ I ND+ + R N R+EI
Sbjct: 201 SGYGEHQAIAPNDSALNRAKNNRVEI 226
>gi|86145932|ref|ZP_01064260.1| putative outer membrane protein [Vibrio sp. MED222]
gi|85836387|gb|EAQ54517.1| putative outer membrane protein [Vibrio sp. MED222]
Length = 204
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 76/196 (38%), Gaps = 9/196 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-D 60
+K L + + ++ + + + T D + + +
Sbjct: 1 MKLLKTILPLCFVVASANIMAETNDEFTYRALPSTTQSYDLEDDDNDGVINARDLCIDTQ 60
Query: 61 TGIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
G + G + ++ FL ++ +A L ++ +T I +Q
Sbjct: 61 IGAEIDNDGCGSYFESSEEKDLHILFANDSAEIKPVFLSQIRQMAAFLKRYENTSIQLQG 120
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ +G ++NL +S++RAD ++ LI G+ +R +V G+ NDT+ N
Sbjct: 121 YASKVGNAEHNLKLSEKRADNVRRALISNGIPPSRAYTV-GYGDVGFR-DNDTETNHALN 178
Query: 176 QRIEIQIFP-RGNIKK 190
+++ + +GNIK+
Sbjct: 179 RKVVASVVGFKGNIKE 194
>gi|86144088|ref|ZP_01062426.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
gi|85829548|gb|EAQ48012.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
Length = 638
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 61/185 (32%), Gaps = 16/185 (8%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
SG A + + + E ++ + + + V +
Sbjct: 452 LIASGSAEAPEATYTFQDPECGEEYFARAEMEGYM-TDEKLVEIPSESSEVTVILELEPA 510
Query: 73 TCYIPVHV----------SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
IP + + L I IL ++P I ++SHTDS G
Sbjct: 511 VTAIPPSFDLGKLINPIYFDFDKSNIRPDAAVELAKIIEILKEYPELHIDVRSHTDSRGN 570
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQR 177
NL +S+ R Y+++ G + +S RG+ ++ TK Q N+R
Sbjct: 571 DAYNLALSERRNQSTIDYIVEEGGIARERLSGRGYGETQLLNECSNGVDCTKEQHQLNRR 630
Query: 178 IEIQI 182
E +
Sbjct: 631 SEFIV 635
>gi|29653408|ref|NP_819100.1| putative lipoprotein [Coxiella burnetii RSA 493]
gi|153209098|ref|ZP_01947241.1| putative lipoprotein [Coxiella burnetii 'MSU Goat Q177']
gi|154707266|ref|YP_001425363.1| outer membrane protein [Coxiella burnetii Dugway 5J108-111]
gi|161830938|ref|YP_001596037.1| putative lipoprotein [Coxiella burnetii RSA 331]
gi|165923897|ref|ZP_02219729.1| putative lipoprotein [Coxiella burnetii RSA 334]
gi|212213417|ref|YP_002304353.1| outer membrane protein [Coxiella burnetii CbuG_Q212]
gi|212219453|ref|YP_002306240.1| outer membrane protein [Coxiella burnetii CbuK_Q154]
gi|29540670|gb|AAO89614.1| outer membrane protein [Coxiella burnetii RSA 493]
gi|120575507|gb|EAX32131.1| putative lipoprotein [Coxiella burnetii 'MSU Goat Q177']
gi|154356552|gb|ABS78014.1| outer membrane protein [Coxiella burnetii Dugway 5J108-111]
gi|161762805|gb|ABX78447.1| putative lipoprotein [Coxiella burnetii RSA 331]
gi|165916651|gb|EDR35255.1| putative lipoprotein [Coxiella burnetii RSA 334]
gi|212011827|gb|ACJ19208.1| outer membrane protein [Coxiella burnetii CbuG_Q212]
gi|212013715|gb|ACJ21095.1| outer membrane protein [Coxiella burnetii CbuK_Q154]
Length = 186
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 4 ELGLSMFIMTTIS--GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++ +S + T+S C F T + + R + LQ
Sbjct: 8 KILISALAILTLSFTACARKPAPPPPPFSVLRVTTPLTHAR--------QKALAATLQSR 59
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIA-----IQS 115
G+ + + G + +PV+ F+ + +++K + L+LIA L+ + T I + +
Sbjct: 60 GVQMIQQGSRLQLILPVNRFFLPQTTTVKEKHIETLRLIALYLHNYKRTHIVHYPIKVYA 119
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ ++ + + S + A VI S+L S +SV GF K+PI + T G N
Sbjct: 120 FSGTVHSRRYRDYESNQYAQVIGSFLW-NHGFSPAQLSVVGFGAKHPIASYRTPEGNAFN 178
Query: 176 QRIEIQI 182
+R+ IQ+
Sbjct: 179 RRVMIQV 185
>gi|320353100|ref|YP_004194439.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320121602|gb|ADW17148.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
Length = 1326
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 1/160 (0%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
++ + + + T + + + A D + + +
Sbjct: 1163 KAQPQPEAVAPLTAATPAADDQDKDGVADAADLCPGSPAGSPVNGLGCPAGKGIILQGVN 1222
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ L +A L P + + +TDS G K NL +S +RA + Y
Sbjct: 1223 FASGTAVFTQESRKNLDTVAAALAHVPQMRVEVAGYTDSAGDPKKNLDLSAQRAQSVVDY 1282
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
L + + ++ +G+ + PI N T G+Q N+R+E+
Sbjct: 1283 LQTK-GVARAQLTAKGYGKENPIADNATAAGKQKNRRVEL 1321
>gi|149202387|ref|ZP_01879360.1| OmpA domain protein [Roseovarius sp. TM1035]
gi|149144485|gb|EDM32516.1| OmpA domain protein [Roseovarius sp. TM1035]
Length = 311
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
G ++ E + L + V + + + + L L +A
Sbjct: 166 AEGYTVQPIPAEEREALPRVDL-VQALQTQGHAVLEGLDFGLGDNALGAGPYRSLVTLAE 224
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
L P T +A+ H+DSIG L+ N +S+ RA+ + + L+++ + + G Y
Sbjct: 225 FLTASPETRVALVGHSDSIGGLEQNSALSRARAEAVLNLLVEQHGVAPAQVEAHGIGYLS 284
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
PI +N + GR+ N+R+E+ +
Sbjct: 285 PIASNTSPEGRERNRRVEVVLL 306
>gi|332669204|ref|YP_004452212.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332338242|gb|AEE44825.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484]
Length = 301
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/170 (13%), Positives = 49/170 (28%), Gaps = 6/170 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI--P 77
V D+ D + + + +
Sbjct: 117 ATPTTDASVDPATLAAAQAEAAHLTELRDRIAQALAANGLDQAVRMRIDERGLVLGLVAD 176
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI---GTLKNNLLISQERA 134
+ L +L +A+ L ++++ H + I G N +S +RA
Sbjct: 177 DVFFAPARAELTDTARRVLD-VASPLIVGIGENVSVEGHANVIPVSGRYPTNWELSADRA 235
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +L++ I GF P+ D+ N+R+++ I
Sbjct: 236 TQVLRHLVEVDGMPGPRIMAVGFGDTRPLVAGDSPEALAANRRVDLVILS 285
>gi|320182481|gb|EFW57375.1| Integral membrane protein YfiB [Shigella boydii ATCC 9905]
Length = 127
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + ++ L + +Q +A L T + HTD+ G
Sbjct: 8 ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLTSTGLTHARMDGHTDNYGEDSY 67
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA+V+ G ++ +G KYPI +N T GR N+R+ + I
Sbjct: 68 NEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVIT 125
>gi|262275324|ref|ZP_06053134.1| outer membrane protein [Grimontia hollisae CIP 101886]
gi|262220569|gb|EEY71884.1| outer membrane protein [Grimontia hollisae CIP 101886]
Length = 197
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 71/182 (39%), Gaps = 13/182 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + L I+ + GC L++ E + + +
Sbjct: 1 MKHVLLISSILIVLGGCSLSADEPPLAEQRSDLFDADSDGVINAR------DLCDNTPQE 54
Query: 62 GIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + G + + +E + L +A L +P T + +Q H
Sbjct: 55 AV-IDNDGCPTYLLLESNNSLRIQFANDSAIVEPAYREALDKMAGFLKLYPETFLELQGH 113
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
T S G+ N +S +RA ++++LI++GV +R +++ G + ++T+ + N+
Sbjct: 114 TSSPGSDDYNQNLSIQRAKAVQAHLIEKGVPIDR-LTLIGLGEGDLMLADNTETTQFVNR 172
Query: 177 RI 178
R+
Sbjct: 173 RV 174
>gi|206895822|ref|YP_002246694.1| OmpA family protein [Coprothermobacter proteolyticus DSM 5265]
gi|206738439|gb|ACI17517.1| OmpA family protein [Coprothermobacter proteolyticus DSM 5265]
Length = 237
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 8/156 (5%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKF 92
+ S+L E Q Q I V + + I + F+ + +
Sbjct: 80 MQGPMTVAELYSNLGGVEKSIQQQYGSEAIEVIEGVNEVRVRISGDLLFMPCSASIRPET 139
Query: 93 LPMLQLIATIL--NKFPSTVIAIQSHTDS----IGTLKNNLLISQERADVIKSYLIQRGV 146
+L +A L + + I+ H ++ IS +RA + G+
Sbjct: 140 SQILSALAPELVKAQKEGYRVYIEGHAAYTLSTCPGYIDDFHISSDRALNVLERFKSLGL 199
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ ++ G+ P+ +T G+ N+R+EI I
Sbjct: 200 DDSKM-ALVGYGDNVPVGDVNTPQGQAKNRRVEITI 234
>gi|197106554|ref|YP_002131931.1| OmpA family protein [Phenylobacterium zucineum HLK1]
gi|196479974|gb|ACG79502.1| OmpA family protein [Phenylobacterium zucineum HLK1]
Length = 186
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 10/143 (6%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ + A+ V +GD + + + + P+L A
Sbjct: 47 QGAPTQPPVAQQPLAPVPGSAQDFVVNVGDRV-------YFDLDQHDVRTDARPLLDAQA 99
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L ++P + I+ + D GT + NL + RA+ ++ + ++ IS F +
Sbjct: 100 EWLRRYPQVRVRIEGNADERGTREYNLALGARRANSVRD-YLVNRGVTSDRISTISFGKE 158
Query: 161 YPIDTNDTKVGRQNNQ--RIEIQ 181
P+D T+ Q N+ R I
Sbjct: 159 QPLDPGTTEEAYQKNRNARTAIV 181
>gi|312796781|ref|YP_004029703.1| peptidoglycan-associated lipoprotein [Burkholderia rhizoxinica HKI
454]
gi|312168556|emb|CBW75559.1| Peptidoglycan-associated lipoprotein [Burkholderia rhizoxinica HKI
454]
Length = 169
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++ P+LQ A L P + IQ +TD GT + NL + Q+R
Sbjct: 61 LAKRSIYFDFDSYTVSNEYQPLLQAHAQYLKGHPQRHVLIQGNTDERGTSEYNLALGQKR 120
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
A+ ++ L GV+ ++ +V + P T + N+R ++
Sbjct: 121 AESVRRTLALLGVNDSQMEAVS-LGKEKPAATGHDEASWAQNRRADLV 167
>gi|32265934|ref|NP_859966.1| hypothetical protein HH0435 [Helicobacter hepaticus ATCC 51449]
gi|4809140|gb|AAD30109.1|AF134212_1 membrane-associated protein map18 [Helicobacter hepaticus]
gi|32261983|gb|AAP77032.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 153
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 63/182 (34%), Gaps = 31/182 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + + + GC + D+ G +
Sbjct: 1 MKKYIAMGVLAALISVGCS----------EPDAADSGSGKAAGGDNFVDLAGG-----AG 45
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V + + + ++ A L + ++ HTDS
Sbjct: 46 GYVKV--------------LFDFDKYDIRSDMEDRVEKSAAALKST-GAKVVLEGHTDSY 90
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ N + +RA+ +K+ L RGV++++ +V + P T+DT Q N+R+E
Sbjct: 91 GSDAYNYALGTKRANAVKNALTTRGVNASQIKTVS-YGESKPTCTSDTPECNQENRRVEF 149
Query: 181 QI 182
++
Sbjct: 150 KL 151
>gi|320183086|gb|EFW57948.1| Integral membrane protein YfiB [Shigella flexneri CDC 796-83]
gi|323167728|gb|EFZ53423.1| ompA family protein [Shigella sonnei 53G]
gi|332092191|gb|EGI97269.1| ompA family protein [Shigella boydii 3594-74]
gi|332765583|gb|EGJ95796.1| ompA family protein [Shigella flexneri 2930-71]
gi|333000803|gb|EGK20377.1| ompA family protein [Shigella flexneri K-218]
Length = 127
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + ++ L + +Q +A L T + HTD+ G
Sbjct: 8 ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSY 67
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA+V+ G ++ +G KYPI +N T GR N+R+ + I
Sbjct: 68 NEGLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVIT 125
>gi|296533201|ref|ZP_06895824.1| type VI secretion system OmpA/MotB family protein [Roseomonas
cervicalis ATCC 49957]
gi|296266471|gb|EFH12473.1| type VI secretion system OmpA/MotB family protein [Roseomonas
cervicalis ATCC 49957]
Length = 162
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 5/142 (3%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V+ I + L ++F+P+L I + +
Sbjct: 18 RLREFLAPEIAQGLVTVTGDVQRTMVRIQGSGMYASGSATLNERFVPLLTRIGEAVREED 77
Query: 108 STVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ I H+D+ +N +SQ RA+ + + G P+
Sbjct: 78 AGRTDILGHSDNQPIRTLRFPSNFHLSQARAEAALEVIRRASGLEAARFQAEGRGDAEPV 137
Query: 164 DTNDTKVGRQNNQRIEIQIFPR 185
N T GR+ N+RIE+ + R
Sbjct: 138 ADNRTAEGREANRRIEVVVLNR 159
>gi|332292047|ref|YP_004430656.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332170133|gb|AEE19388.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 650
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 63/173 (36%), Gaps = 7/173 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + T ++ + L I + + +
Sbjct: 480 ATCVTQYVVRASKEEYTTAEAITTTPDITGTLANDLVLSLLQKPINIGDDLAKV-LELNP 538
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L+ + ++ ++P+ V+ +SHTDS G NL +S +RA
Sbjct: 539 IYFDFDRFNIRPDAALELEKVIAVMREYPNLVLDARSHTDSRGKDSYNLSLSDKRAKATV 598
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDT-----NDTKVGRQNNQRIEIQIFPRG 186
+Y+I + S+ IS +G+ K P++T N ++ Q N+R E +
Sbjct: 599 AYIINQ-GISSSRISGQGYGEKQPVNTCSNGVNCSEEEHQLNRRSEFIVISNN 650
>gi|256376462|ref|YP_003100122.1| OmpA/MotB domain protein [Actinosynnema mirum DSM 43827]
gi|255920765|gb|ACU36276.1| OmpA/MotB domain protein [Actinosynnema mirum DSM 43827]
Length = 295
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 19/187 (10%)
Query: 16 SGCGLASREKKKVFLHKSNDTD--------IVNKRFGSSLDKAEDEFQMQLQDTGI---- 63
SG G K D + L + ++ QLQD G+
Sbjct: 94 SGSGSTQDLSSKAAQEAVQQADRQKAAKNLKAAEAEVQHLKELGEQMAKQLQDQGLGGTA 153
Query: 64 --VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
V G ++T V L ++ +A +L + + + HT+ +
Sbjct: 154 QFRVDDRGLVVTVVTTSVVFAGDRAELLPDGQRIVDALAPVLKSVGN-RVEVDGHTNQLP 212
Query: 122 ----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
++ +S RA + YLI+R ++ ++ G+A P+ N+R
Sbjct: 213 VATVNYPSSWELSTARASSVVRYLIERDGLASDRLTAVGYADTRPLYDPADPRSVTGNRR 272
Query: 178 IEIQIFP 184
+E+ +
Sbjct: 273 VEVVVLS 279
>gi|206564258|ref|YP_002235021.1| putative outer membrane protein A precursor [Burkholderia
cenocepacia J2315]
gi|198040298|emb|CAR56283.1| putative outer membrane protein A precursor [Burkholderia
cenocepacia J2315]
Length = 220
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L L + + + + + TDS+G+ NL +S+ RA+ +
Sbjct: 115 DALFATDHATLAPTARESLDRLLSERADRTYSQVTVTGFTDSVGSDDYNLALSKRRAESV 174
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++ ++V G P+ +N T GR +N+R+EI++
Sbjct: 175 AA-YLKAHGLKTDSMTVSGRGKADPVASNATPEGRASNRRVEIRL 218
>gi|161520025|ref|YP_001583452.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|189353793|ref|YP_001949420.1| OmpA/MotB family outer membrane protein [Burkholderia multivorans
ATCC 17616]
gi|160344075|gb|ABX17160.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
gi|189337815|dbj|BAG46884.1| OmpA/MotB family outer membrane protein [Burkholderia multivorans
ATCC 17616]
Length = 220
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L L + T +++ +TDS+G+ +NL +S+ RA+ +
Sbjct: 115 DALFASGLATLTPAARASLDKLLNAHADRSYTQVSVTGYTDSVGSDASNLALSKRRAEAV 174
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +Q+ + R ++V G PI +N T GR N+R+EI +
Sbjct: 175 AA-YLQQRGLNARTLTVTGRGSADPIASNATAEGRATNRRVEISL 218
>gi|17545455|ref|NP_518857.1| peptidoglycan-associated lipoprotein precursor [Ralstonia
solanacearum GMI1000]
gi|17427747|emb|CAD14266.1| probable peptidoglycan-associated lipoprotein precursor [Ralstonia
solanacearum GMI1000]
Length = 172
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 14/164 (8%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + + R + +D + DE
Sbjct: 22 CSSGVKLDDTSKNATGGAAAGADTRNVTPVDVSRDEL-------------TDPNSPLAKR 68
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ ++ +L A L + IQ +TD GT + NL + Q+RA+ +
Sbjct: 69 SVYFDFDSYTVKPEYQGLLTQHARYLQSHNQRKVLIQGNTDERGTSEYNLALGQKRAEAV 128
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ L GV ++ SV + P + + N+R +I
Sbjct: 129 RRALSSLGVPDSQMESVS-LGKEKPQASGHDEESWAQNRRSDIV 171
>gi|89094844|ref|ZP_01167777.1| peptidoglycan-associated lipoprotein precursor [Oceanospirillum sp.
MED92]
gi|89080899|gb|EAR60138.1| peptidoglycan-associated lipoprotein precursor [Oceanospirillum sp.
MED92]
Length = 171
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 67/183 (36%), Gaps = 19/183 (10%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K + L++ + ++GC + ++ Q G
Sbjct: 8 KAVALALSVA-WVAGCSTGGSNTEGGANTGTDTGTTQGVG----------------QGNG 50
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ S + D+ V + ++ L+ A L+ PS + ++ H D GT
Sbjct: 51 VSGSSMSDVANLQ-TVFYFDFDKSVVKAAGFADLEKHAAYLSANPSAQVVLEGHADERGT 109
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ N+ + + RA + +L G S ++ +V F + P ++ N+R+E++
Sbjct: 110 REYNIALGERRAKAVARFLQVNGASGSQIETVS-FGEEKPAVLGHSEASWSQNRRVELKY 168
Query: 183 FPR 185
R
Sbjct: 169 VTR 171
>gi|320093629|ref|ZP_08025513.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp.
oral taxon 178 str. F0338]
gi|319979417|gb|EFW10895.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp.
oral taxon 178 str. F0338]
Length = 402
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ E + L +A++L + + HTDS+G +N +S++RA
Sbjct: 290 DSVLFDFGESTVRADAADTLAKLASVLTDAGAPTAHVYGHTDSVGDDASNQTLSEQRAKA 349
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQI 182
+ L + G ++ + +GF PI N D GRQ N+R+EI I
Sbjct: 350 VVDELKKNGATTA--LDWKGFGETQPIAPNTNDDGSDNPAGRQANRRVEIYI 399
>gi|262364585|gb|ACY61142.1| OmpA domain protein [Yersinia pestis D182038]
Length = 987
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 11/147 (7%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVFLEKKF--LPMLQLIAT 101
+ ++ + L + + V + + + E L ++F ++ +
Sbjct: 812 NIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSDGAFRTGEATLSEEFINKKNIERLGL 871
Query: 102 ILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVS---SNRFISV 154
L +P I + HTD+ NNL +S RA V+ L + R IS
Sbjct: 872 ALAPWPG-DIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINETHQREISA 930
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G P+ N T+ GR+ N+R++I
Sbjct: 931 IGRGESDPLADNATEEGRKRNRRVDIL 957
>gi|260768264|ref|ZP_05877198.1| outer membrane protein [Vibrio furnissii CIP 102972]
gi|260616294|gb|EEX41479.1| outer membrane protein [Vibrio furnissii CIP 102972]
Length = 176
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 6/128 (4%)
Query: 61 TGIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+G + G + + F +Q +A L + S I IQ
Sbjct: 32 SGAEIDNDGCGEVIRNSAKRQLHILFANDSYEINPVFADQIQAMAEFLKTYQSASIEIQG 91
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+T +GT + N +SQ+RA+ ++ L+ S + + + GF +D DT N
Sbjct: 92 YTSKVGTNEYNQELSQKRAEAVERKLLS-YGISPKRVRIIGFGETRLLDDGDTNSAHAVN 150
Query: 176 QRIEIQIF 183
+R+ +
Sbjct: 151 RRVTATVV 158
>gi|323491407|ref|ZP_08096592.1| Outer membrane protein [Vibrio brasiliensis LMG 20546]
gi|323314533|gb|EGA67612.1| Outer membrane protein [Vibrio brasiliensis LMG 20546]
Length = 203
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 72/198 (36%), Gaps = 13/198 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L ++ T + + + ++ + ++ D + +
Sbjct: 1 MNKTLLSALITATVFAA---PLKAEDTYEYIETPTPNQIDDLLDEDKDGVINA-RDLCPQ 56
Query: 61 TGIVVSRIGDMITCYIPVH-------VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
T D YI + ++ FL ++ ++ L +PST I +
Sbjct: 57 TPAKADIDNDGCGTYIKTQEEMSLHILFANDSSEIQPAFLAQIREMSEFLEAYPSTSIEL 116
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ + +G N+ +S+ RA ++ L+ ++ + + GF D ++
Sbjct: 117 RGYASKVGKPDYNMALSERRAQSVEDALLDN-GVASDRVRIVGFGDTELEAFGDDEISHA 175
Query: 174 NNQRIEIQIFP-RGNIKK 190
N+++ + +GN+K+
Sbjct: 176 KNRKVVATVVGHKGNVKE 193
>gi|301166059|emb|CBW25633.1| peptidoglycan-associated lipoprotein precursor [Bacteriovorax
marinus SJ]
Length = 169
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 1/110 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I + L L A L PS I ++ H D G ++ NL + + RA
Sbjct: 61 IKTVFFGFNSSVLSTSARETLNANAEFLKANPSVEIQVEGHCDERGGVQYNLALGERRAV 120
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+K +L+ ++ IS F + P+ + +N+R I +
Sbjct: 121 AVKDHLVA-MGVNSSRISTISFGKERPVAFGHDESAWASNRRGNFIITAK 169
>gi|291442513|ref|ZP_06581903.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
gi|291345408|gb|EFE72364.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 208
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 65/183 (35%), Gaps = 9/183 (4%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
L T++ C + ++ + + K D + + +V +
Sbjct: 15 LLALTALTMTLCTGTRVQNAAASPYEDGSGLALRSGATLAPPKILDLGSDPVGISRVVGN 74
Query: 67 RIGDMITCYIPVHV---------SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
R G V L + IA + + +T + + T
Sbjct: 75 RDGAERRTDTNTEVTYELQAAVLFAKDSGRLSDSARSRIAAIAREIEQRAATRVRVTGFT 134
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D++G+ + ++S +RAD ++ L S GF + P+ +N T+ R+ N+R
Sbjct: 135 DNLGSSVHGDILSTQRADAVRDVLTDDLRSEAVTFETHGFGERRPVASNATEASRRENRR 194
Query: 178 IEI 180
+EI
Sbjct: 195 VEI 197
>gi|262368251|ref|ZP_06061580.1| inner membrane lipoprotein yiaD [Acinetobacter johnsonii SH046]
gi|262315929|gb|EEY96967.1| inner membrane lipoprotein yiaD [Acinetobacter johnsonii SH046]
Length = 254
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
QL I + + I L +L +A LNK +
Sbjct: 127 RLNAQLSVNQAEQQIIDEALKNRIIE--FESGSAVLAVSGTQILDEMAVALNKVGGKKVK 184
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTDS G + NL +S+ERA +K+YLI + +++ R +SV G P+ N T GR
Sbjct: 185 IIGHTDSSGDVAKNLALSKERAVAVKNYLINKSIAAER-LSVEGLGSNKPVADNATADGR 243
Query: 173 QNNQRIEIQIF 183
+ N+RIE +
Sbjct: 244 KKNRRIEFDVI 254
>gi|148264196|ref|YP_001230902.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146397696|gb|ABQ26329.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 520
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 11/170 (6%)
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT---------CYIPVH 79
K+ +N SSL+ + ++++ I VS P
Sbjct: 350 VEPKAEIATELNPVAESSLEGVTPLYGIEVKGDNIEVSNAKPTQISQKMSVYRKFRFPDI 409
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ ++ L + L +A + + I HTDSIG++ N+ +S +RA I
Sbjct: 410 MFEFGQIELSNEVKKALSEVAEQARTDKTWLYLRIDGHTDSIGSVGYNMDLSIKRAIAIA 469
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ-IFPRGN 187
SYLI + + V+G I N T GR+ N+R E+ + P+GN
Sbjct: 470 SYLIIKEGIDPTRVFVKGMGKSKLIADNSTTDGRRMNRRFEVLFLVPKGN 519
>gi|282859313|ref|ZP_06268425.1| OmpA family protein [Prevotella bivia JCVIHMP010]
gi|282587893|gb|EFB93086.1| OmpA family protein [Prevotella bivia JCVIHMP010]
Length = 226
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 64/174 (36%), Gaps = 7/174 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCY 75
G + S G +DK E ++ + + + +
Sbjct: 46 GHNGKSTAIGAAIGSVIGAGAGALIGHHMDKVAREVASRVPNASVEKVTDANGLQCVKVT 105
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ F + L L A ++ +AIQ +TD+ G+ NL +SQ RA
Sbjct: 106 FDSGILFPLNSYTLSSASKKDLYEFAKVMKANADCDVAIQGYTDASGSDNINLPLSQNRA 165
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ + S L GVS + SV G PI + Q N+R+E+ ++ ++
Sbjct: 166 NAVSSCLRSNGVSGRQIRSVEGLGSANPI---ENARVSQKNRRVEVYMYASEDM 216
>gi|323524556|ref|YP_004226709.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. CCGE1001]
gi|323381558|gb|ADX53649.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. CCGE1001]
Length = 442
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 7/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPS 108
++ + ++ + V + F + P++ IA + K P
Sbjct: 305 LKELLKDEIVAGTVSVDEDAHHSSVTFRGDAMFPPGAASVNASMAPLIAKIAAEIVKVPG 364
Query: 109 TVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ + +TD++ S ERA + L GV + R + G P+
Sbjct: 365 -KVMVFGYTDNVPIRSRQFASNDALSAERATQVLQMLQASGVPAGR-LEAVGRGEAAPVG 422
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T GR N+R+EI +
Sbjct: 423 DNRTAQGRAQNRRVEIAV 440
>gi|325981887|ref|YP_004294289.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
gi|325531406|gb|ADZ26127.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
Length = 264
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ +++ + V++ IT I V F + L + + LQ IA ++ I
Sbjct: 116 ALEPLVKNGQVRVTQNSLGITVEINASVLFSPGQAKLAENSILSLQAIANVIKGH-EHEI 174
Query: 112 AIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
++ HTD++ +N +S RA + I++ ++ G+ PI++N+
Sbjct: 175 NVEGHTDNLPINTENFPSNWELSSARASSVIRLFIEK-GVEAHRLTAIGYGENRPIESNE 233
Query: 168 TKVGRQNNQRIEIQIFP 184
T GR+ N+R+ + I
Sbjct: 234 TFEGRKRNRRVTVMIMS 250
>gi|159045641|ref|YP_001534435.1| OmpA domain-containing protein [Dinoroseobacter shibae DFL 12]
gi|157913401|gb|ABV94834.1| OmpA domain protein [Dinoroseobacter shibae DFL 12]
Length = 617
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + ++ IA +L I HTD+ G NL +SQ RAD + +
Sbjct: 499 FEPGSSQIAAEAEAIMDRIAQVLVDCSHVEFEIAGHTDNQGREVMNLNLSQARADAVLAA 558
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L +R + + + RG+ PI N T GR+ N+RI
Sbjct: 559 LSERRILTGNLV-ARGYGEAMPIADNSTAEGREANRRISFT 598
>gi|86131405|ref|ZP_01050003.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85817850|gb|EAQ39018.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 568
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + + + + + P L +A + P + + SHTDS +
Sbjct: 444 LEEAECGKAITLNNILYDLDKYDIRPDARPELNRLAQFMKDNPGIRVEVSSHTDSRASDS 503
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIE 179
N +SQ RA+ Y++ +GVS ++ I+ +G+ ++ ++ Q N+R E
Sbjct: 504 YNQTLSQNRANAAVDYVVSQGVSRSK-ITGKGYGESRLLNECADGVSCSETKHQINRRTE 562
Query: 180 IQIF 183
+++
Sbjct: 563 MKVI 566
>gi|146278244|ref|YP_001168403.1| hypothetical protein Rsph17025_2208 [Rhodobacter sphaeroides ATCC
17025]
gi|145556485|gb|ABP71098.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 525
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 61/185 (32%), Gaps = 17/185 (9%)
Query: 16 SGCGLASREKKKVFLHKSNDT---DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
S + E+K+ + + + NK + + + L V +GD
Sbjct: 343 SALAQVAAEQKRRAELEEAERLRLEARNKDLERFRSEFFGQLRQVLAGRE-GVRIVGDRF 401
Query: 73 TCYIPVHVSFVSEVFLEKKFL-------PMLQLIATILNKFPSTVIAIQSHTDS-----I 120
+ L + L I + + +I + HTD
Sbjct: 402 VFS-SEVLFEPGSAQLASEGRTQISGVTRTLSEIREQIPEGIDWIIRVDGHTDDVPLSGF 460
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G ++N +S RA + Y+ Q ++ GF P+ + R N+RIE+
Sbjct: 461 GAFRDNWELSSARALSVVRYMQQTLGFPPSRLAATGFGEYRPVVEGSSPEARAQNRRIEL 520
Query: 181 QIFPR 185
++ R
Sbjct: 521 KLTER 525
>gi|312131594|ref|YP_003998934.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311908140|gb|ADQ18581.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 765
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 7/116 (6%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ L + L+ I +L K P I + SHTD+ G+ + N+++S+
Sbjct: 646 VIRLENIYYDNESYKLGAQAKQSLRKIGELLQKSPELAIEVSSHTDTRGSAQANMILSER 705
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
RA+ +K +L+Q S IS G P++ T N+R EI+I
Sbjct: 706 RAEEVKKFLVQY--ISGHRISAVGKGESQPVNACGDGVQCTDAEHARNRRTEIRIL 759
>gi|170736167|ref|YP_001777427.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169818355|gb|ACA92937.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 223
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 64/187 (34%), Gaps = 10/187 (5%)
Query: 5 LGLSMFIMTTISGCGL-ASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--EFQMQLQDT 61
+ +F+ + + + + L + + D A L+
Sbjct: 36 TLMVLFLALYVLQLAKYNALDARYQTLARQAGGAATAAVDTAKADPAPPWLALLDSLKSN 95
Query: 62 G-IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G I + + + I + F + L P+L IA L+ + I ++ HTDS
Sbjct: 96 GRISLVKAPHGVEIGIDAKILFNVGDARLLPDSSPVLNQIAQALSAHTTGDILVEGHTDS 155
Query: 120 IGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ ++N +S RA + + + ++ G A P+ R N
Sbjct: 156 VPIANAKYESNWELSSARAGSVVR-YLSERGVAPHRLAAIGRADTQPLVAGGDAGSRARN 214
Query: 176 QRIEIQI 182
+R+ I +
Sbjct: 215 RRVTIFV 221
>gi|115360213|ref|YP_777351.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115285501|gb|ABI91017.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 228
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 59/158 (37%), Gaps = 9/158 (5%)
Query: 33 SNDTDIVNKRFGSSLDKAED---EFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFL 88
V ++ ++A + I + R I I + F + L
Sbjct: 70 DGGASSVMAAAPATPERAPAWLTSLDALKTNGRISLVRAPHGIEIGIDAKILFNVGDARL 129
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQR 144
P+L IA L++ + I ++ HTDS ++N +S RA + YL +R
Sbjct: 130 LPDATPVLSEIARALSEHATGDILVEGHTDSAPIANAKYESNWELSSARAGSVVRYLAER 189
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++ G A P+ D R N+R+ I +
Sbjct: 190 -GVAPHRLAAIGRADTQPLVAGDDAPARARNRRVTIFV 226
>gi|281357860|ref|ZP_06244346.1| OmpA/MotB domain protein [Victivallis vadensis ATCC BAA-548]
gi|281315807|gb|EFA99834.1| OmpA/MotB domain protein [Victivallis vadensis ATCC BAA-548]
Length = 216
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 67/207 (32%), Gaps = 32/207 (15%)
Query: 1 MIKEL----GLSMFIMTTISGCG-------LASREKKKVFLHKSNDTDIVNKR------- 42
M+K L++ + SGCG + + N +
Sbjct: 1 MLKRFVGCAALAVMLGLFSSGCGIFDTDVPTEDLQPVPEAIDDPNGGNASLNGNDFNSGN 60
Query: 43 ------------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
G ++ AE + G V +P+ L
Sbjct: 61 PYGGSGAIGGPGVGEWVEGAEQGSAIGADADG-WVPADPTGNRLNMPIIYFAYDSDVLVP 119
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L IA ++ P + ++ H D GT + N + + RA+ I++YL +G++ R
Sbjct: 120 SETANLDRIAAYMSDKPELGLLVEGHCDQRGTEEYNRALGERRANAIRAYLAGKGLADTR 179
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQR 177
++ + P + + + N+R
Sbjct: 180 MKTIS-YGEDKPAVEGNNEEAWRQNRR 205
>gi|254450850|ref|ZP_05064287.1| peptidoglycan-associated lipoprotein [Octadecabacter antarcticus
238]
gi|198265256|gb|EDY89526.1| peptidoglycan-associated lipoprotein [Octadecabacter antarcticus
238]
Length = 175
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 64/183 (34%), Gaps = 17/183 (9%)
Query: 2 IKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K + + T+S C A R + N + N S+LD + Q
Sbjct: 1 MKHFIKFALLIGILTLSACTNADRFNNSDAV-DLNGANGANDINQSALDGVNNPSSPQFF 59
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
I GD + + V L L A L+ + I+ H D
Sbjct: 60 SQTI-----GDRV-------LFEVDTSTLTAVGRNTLDGQAGWLSTNSDYLAVIEGHADE 107
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-I 178
GT + NL + RA+ ++ YLI R ++ I + + P+ + N+R +
Sbjct: 108 QGTREYNLALGARRANAVREYLISR-GLASSRIRTVSYGKERPLAVCSEESCYAQNRRAV 166
Query: 179 EIQ 181
I
Sbjct: 167 TII 169
>gi|325105158|ref|YP_004274812.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324974006|gb|ADY52990.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 593
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V I T + + + +L + IL + PS I + SHTDS G+
Sbjct: 466 VDNIESGKTFVLKNINYDFDKSDIRPDAARILDNLVNILKQNPSLRIELSSHTDSRGSDA 525
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIE 179
NL +SQ+RA+ YL+ RG+ +R + RGF ++ T + N+R E
Sbjct: 526 YNLRLSQKRAESAVKYLVDRGIDKSRLV-ARGFGETKLLNKCANEVDCTDAEHEVNRRTE 584
Query: 180 IQIF 183
+++
Sbjct: 585 VKVL 588
>gi|203287740|ref|YP_002222755.1| flagellar motor rotation protein B [Borrelia recurrentis A1]
gi|201084960|gb|ACH94534.1| flagellar motor rotation protein B [Borrelia recurrentis A1]
Length = 262
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 14/168 (8%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE-KKF 92
T + +S +K+ EF ++Q ++V R + + F S ++
Sbjct: 87 STAKNKQASQASKNKSIIEFVEKIQSNKVIVRRHERGVVVSLLADAFFDSASAEVKLDDN 146
Query: 93 LPMLQLIATIL--NKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRG 145
++Q IA+ + I+ HTD+ G K+N +S RA + ++
Sbjct: 147 RDVIQKIASFIGFLDNQGYNFKIEGHTDNVDVNINGIWKSNWELSSARAVNMLEQILNYT 206
Query: 146 VSSNR-----FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
S V GFA P+ T+DT GR N+RI+I I ++
Sbjct: 207 DHSKIESIESKFEVSGFAGSRPVATDDTPEGRAYNRRIDILITSDASL 254
>gi|56697920|ref|YP_168291.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
gi|56679657|gb|AAV96323.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
Length = 211
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 65/176 (36%), Gaps = 17/176 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++ + + + T+S CG+ + + FG++ + T
Sbjct: 4 MRNWMMCLGLAGTLSACGI------------EAGYQVDSGTFGNATLNNTQMMNGERSYT 51
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
++ R I I L+ +L L A + +FP + HTD++G
Sbjct: 52 QVLADRFAREIPTQIN---FAFDSAELDATAQQVLTLQADWIRQFPEVRFRVYGHTDAVG 108
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N + RA + S+ RG+S +R +V + P+ T + N+R
Sbjct: 109 SSGYNKSLGMRRARAVVSFFASRGISRSRLEAVVSYGETQPLVP--TGERERRNRR 162
>gi|222149694|ref|YP_002550651.1| hypothetical protein Avi_3670 [Agrobacterium vitis S4]
gi|221736676|gb|ACM37639.1| flagellar motor protein [Agrobacterium vitis S4]
Length = 343
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + + + + +A L + P +
Sbjct: 205 EILSDRQNIRIVGDRFVFQ-SEVLFPSGGADMNPQGQEEMVKLANALIDLAKEIPPDINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G +N +S RA + +LI +GV ++R ++ GF PI
Sbjct: 264 VLRVDGHTDNVQLSGNGRYPDNWALSAARAVSVVKFLISKGVPADR-LAAAGFGEFQPIA 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
DT R N+RIE+++ R
Sbjct: 323 PGDTPEARAQNRRIELKLTER 343
>gi|172064681|ref|YP_001812331.1| DotU family type IV/VI secretion system protein [Burkholderia
ambifaria MC40-6]
gi|171998166|gb|ACB69082.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria MC40-6]
Length = 436
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 7/137 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V + + + P L + + + +
Sbjct: 301 LRNEVARGLLTVDEDDRRSVVVFKGDSMFASGQSTVLPVVEPALGKVGGEVARVGG-SVL 359
Query: 113 IQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++ HTD+ +NL++S++RA + L QRG ++R I G P+ N T
Sbjct: 360 VRGHTDNQPIRSAVFPSNLVLSEKRAAYVAQILQQRGTPADR-IHAIGKGDTQPVGDNAT 418
Query: 169 KVGRQNNQRIEIQIFPR 185
GR N+R+EI + +
Sbjct: 419 AAGRALNRRVEIVVTQQ 435
>gi|319953135|ref|YP_004164402.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319421795|gb|ADV48904.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 683
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 14/160 (8%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV---------SFVSEVFL 88
+ ++ ++ + VS + + + F+
Sbjct: 522 TIKTNRKEYFEELKEVMTTLNDTEIVEVSLKKLKELIVVEDGIRKLKTDMIYFNFDKSFI 581
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ L + +++++P VI I+SHTDS G N +S +RA + Y+I +G+ +
Sbjct: 582 REDASKELNKLVEVMSEYPEMVIKIESHTDSRGASDYNRYLSDKRAKSSRDYIISQGIDA 641
Query: 149 NRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
+R S G+ ++ D T+ + N+R E I
Sbjct: 642 DRIESAIGYGEDRLLNDCDGSVKCTREKHELNRRSEFIIV 681
>gi|315179972|gb|ADT86886.1| hypothetical outer membrane protein [Vibrio furnissii NCTC 11218]
Length = 176
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 6/128 (4%)
Query: 61 TGIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+G + G + + F +Q +A L + S I IQ
Sbjct: 32 SGAEIDNDGCGEVIRNSARRQLHILFANDSYEINPVFADQIQAMAEFLKTYQSASIEIQG 91
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+T +GT + N +SQ+RA+ ++ L+ S + + + GF +D DT N
Sbjct: 92 YTSKVGTNEYNQELSQKRAEAVERKLLS-YGISPKRVRIIGFGETRLLDDGDTNSAHAVN 150
Query: 176 QRIEIQIF 183
+R+ +
Sbjct: 151 RRVTATVV 158
>gi|213964278|ref|ZP_03392508.1| OmpA family protein [Capnocytophaga sputigena Capno]
gi|213953085|gb|EEB64437.1| OmpA family protein [Capnocytophaga sputigena Capno]
Length = 949
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 1/104 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + L + L + + H D G+L N +S+ RA
Sbjct: 316 SNVYFDFDKSNIRSDAKNTLDGLLNFLCFNQHLNMVLTGHADDRGSLDYNQALSERRAQA 375
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+K + I G+ NR I + G P +T+ Q N+R+EI
Sbjct: 376 VKDFFIAGGLDPNR-IKISGEGEGNPAVKGNTEEAYQKNRRVEI 418
>gi|312115989|ref|YP_004013585.1| peptidoglycan-associated lipoprotein [Rhodomicrobium vannielii ATCC
17100]
gi|311221118|gb|ADP72486.1| peptidoglycan-associated lipoprotein [Rhodomicrobium vannielii ATCC
17100]
Length = 169
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 29/182 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + ++SGC + + G+ ++ EF ++ DT
Sbjct: 11 VLFMIAAAVSLSGC----------DKNAPGAGLGLGAGGGNYPPGSKQEFNGKIGDT--- 57
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
L +L A L ++ + I I+ H D GT +
Sbjct: 58 --------------VRYLTDSAELSPDGQQILNAQAVWLRQYTNFPITIEGHADERGTRE 103
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ + +RA+ K++LI + S + I + + P+ D N+R + +
Sbjct: 104 YNIALGAKRAETTKNFLIAQ-GISPQRIRTISYGKERPVAVCDDISCWSQNRR-TVTVLE 161
Query: 185 RG 186
G
Sbjct: 162 GG 163
>gi|89070721|ref|ZP_01157983.1| flagellar motor protein [Oceanicola granulosus HTCC2516]
gi|89043679|gb|EAR49884.1| flagellar motor protein [Oceanicola granulosus HTCC2516]
Length = 1022
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 49/141 (34%), Gaps = 13/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-------T 109
QL + V GD + L + +A +L
Sbjct: 883 QLLEGREGVQIAGDRFVFS-SEVLFAPGSATLSNAGRAQIASVADLLRDIADDIPDGIDW 941
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
VI + HTD G +N +SQ RA + Y+ ++ GF P+
Sbjct: 942 VIRVDGHTDDLPLSGTGEYADNWELSQARALSVVRYMEDFLGFPPDRLAANGFGEHQPLI 1001
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
DT+ R N+RIE+++ R
Sbjct: 1002 DEDTEEARAANRRIELKLTER 1022
>gi|320177022|gb|EFW52043.1| Integral membrane protein YfiB [Shigella dysenteriae CDC 74-1112]
Length = 127
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + ++ L + +Q +A L T + HTD+ G
Sbjct: 8 ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGITHARMDGHTDNYGEDSY 67
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA+V+ G ++ +G KYPI +N T GR N+R+ + I
Sbjct: 68 NEGLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVIT 125
>gi|314916069|gb|EFS79900.1| OmpA family protein [Propionibacterium acnes HL005PA4]
Length = 368
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 59/156 (37%), Gaps = 3/156 (1%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
V L + D+ ++ + V++ I + +
Sbjct: 212 VALPALDPKDLAGVDVSKFVNALVTTTGDASDASRERVTKESMKIDLDA-SVLFDLDSDV 270
Query: 88 LEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
++ ++ A L S I + +TDS G+ +NL +S+ RA + L +
Sbjct: 271 VKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDSSGSASHNLDLSRRRAASVAKVLGSQLS 330
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ G P+ +ND++ GR+ N+R+ I +
Sbjct: 331 KGITLVTA-GKGEADPVTSNDSEAGRRLNRRVTITV 365
>gi|304559160|gb|ADM41824.1| Outer membrane protein [Edwardsiella tarda FL6-60]
Length = 152
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ LQ G + G + ++ L + + + L++
Sbjct: 18 TFSPQQIAVLQQQGFTPTPEGWSFGMS-EKVLFGNNQATLRPESQAHVAELGHALSQVAI 76
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ +TD+ GT + N +S +RAD + + G+ ++ RG PI N T
Sbjct: 77 LHARLDGYTDNYGTDQYNQQLSLKRADKVADAMASGGMPRAN-LTTRGMGKSNPIADNAT 135
Query: 169 KVGRQNNQRIEIQI 182
+ GR N+R+ I I
Sbjct: 136 RQGRAENRRVAIVI 149
>gi|255263223|ref|ZP_05342565.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62]
gi|255105558|gb|EET48232.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62]
Length = 725
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 17/185 (9%)
Query: 16 SGCGLASREKKKVFLHKSNDT---DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
+ ++E++K + + + + + + + L+ V GD
Sbjct: 543 AALARVAQEQRKRAELEEAERKRLEAEAQDLERYRSEFFGQLRDLLEGQD-GVRIEGDRF 601
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILN----KFP---STVIAIQSHTDSI----- 120
+ L + +A IL + P + VI + HTD+
Sbjct: 602 VF-ASEVLFRPGSADLSDAGRDEIAKVAGILRGVASEIPPSINWVIRVDGHTDNTPLSGL 660
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G NN +SQ RA + Y++ ++ GF P+ D+ R N+RIE+
Sbjct: 661 GQFANNWELSQARALSVVLYMVNFLGIPPNRLAANGFGQYQPVTNGDSDQARAQNRRIEL 720
Query: 181 QIFPR 185
+ R
Sbjct: 721 KFTER 725
>gi|171318847|ref|ZP_02907983.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171095946|gb|EDT40882.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 226
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 6/136 (4%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTV 110
I + R I I + F + L P+L IA L++ +
Sbjct: 90 ASLDALKTSGRISLVRAPHGIEIGIDAKILFNVGDARLLPDATPVLSQIARALSEHATGD 149
Query: 111 IAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
I ++ HTDS+ ++N +S RA + YL R + ++ G A P+
Sbjct: 150 ILVEGHTDSVPIANAKYESNWELSSARAGSVVRYLADR-GVAPHRLAAIGRADTQPLVAG 208
Query: 167 DTKVGRQNNQRIEIQI 182
D R N+R+ I +
Sbjct: 209 DDAPARARNRRVTIFV 224
>gi|203284201|ref|YP_002221941.1| flagellar motor rotation protein B [Borrelia duttonii Ly]
gi|201083644|gb|ACH93235.1| flagellar motor rotation protein B [Borrelia duttonii Ly]
Length = 262
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 14/168 (8%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE-KKF 92
T + +S +K+ EF ++Q ++V R + + F S ++
Sbjct: 87 STAKNKQASQASKNKSIIEFVEKIQSNKVIVRRHERGVVVSLLADAFFDSASAEVKLDDN 146
Query: 93 LPMLQLIATIL--NKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRG 145
++Q IA+ + I+ HTD+ G K+N +S RA + ++
Sbjct: 147 RDVIQKIASFIGFLDNQGYNFKIEGHTDNVDVNINGIWKSNWELSSARAVNMLEQILNYT 206
Query: 146 VSSNR-----FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
S V GFA P+ T+DT GR N+RI+I I ++
Sbjct: 207 DHSKIESIESKFEVSGFAGSRPVATDDTPEGRAYNRRIDILITSDASL 254
>gi|163745692|ref|ZP_02153052.1| hypothetical protein OIHEL45_08875 [Oceanibulbus indolifex HEL-45]
gi|161382510|gb|EDQ06919.1| hypothetical protein OIHEL45_08875 [Oceanibulbus indolifex HEL-45]
Length = 645
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 64/185 (34%), Gaps = 17/185 (9%)
Query: 16 SGCGLASREKKKVFLHKSNDT---DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
+ + E+++ ++ + + +K + + L V GD
Sbjct: 463 TALARVAAEERRRAEMEAAERKRLEEESKDLAQYRSEFFGRLRN-LLGNQEGVRIEGDRF 521
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-------TVIAIQSHTDS-----I 120
+ L + + +A IL VI + HTD+
Sbjct: 522 VFS-SEVLFGQGSAVLSQDGQGEIAKVAGILRSVVDDIPAEIDWVIRVDGHTDNVPLSGF 580
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G +N +SQ RA + Y++ + ++ GF P+ +T+ R N+RIE+
Sbjct: 581 GEFADNWELSQARALSVVKYMVNFLGIAPDRLAANGFGQYQPVAEGNTEAARAQNRRIEL 640
Query: 181 QIFPR 185
+ +
Sbjct: 641 KFTEK 645
>gi|302037752|ref|YP_003798074.1| putative peptidoglycan-associated lipoprotein [Candidatus
Nitrospira defluvii]
gi|300605816|emb|CBK42149.1| putative Peptidoglycan-associated lipoprotein precursor [Candidatus
Nitrospira defluvii]
Length = 192
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 56/180 (31%), Gaps = 4/180 (2%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDT---DIVNKRFGSSLDKAEDEFQMQLQDTG 62
L++ + GC S + V + + + L+
Sbjct: 12 LLAVAGPLFLDGCASKSGTSGGATATPPKPPRAEERVAAAPVQEIPAPPEPAPVPLRSVE 71
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ P + + L L ++ A L T + ++ D +GT
Sbjct: 72 MAARNATGEQNIPFPDVLFDFDQYVLRDDALTAVEANAKRLKDNRITKVLLEGRCDEVGT 131
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ NL++ + RA +K ++ + + V + P+ V Q N+ + +
Sbjct: 132 SEYNLVLGERRALSVKR-YLESLGINQLQVDVTSYGKDRPLCLQHNPVCWQKNRSVHFVV 190
>gi|219684554|ref|ZP_03539497.1| outer membrane protein [Borrelia garinii PBr]
gi|219671916|gb|EED28970.1| outer membrane protein [Borrelia garinii PBr]
Length = 389
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + IVV + I + + + + +K L LIA +L KF I I+
Sbjct: 262 QEKKIKDIVVEKNNKGINLSLDIE-FYPDSFQILQKEYKKLDLIAKLLEKFEKNNILIEG 320
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HT+ G + +S++RA I +YLI+ V + I +G+ K P N + + + N
Sbjct: 321 HTEQFGLEEEMYELSEKRARTIGNYLIKMKVKNKDQILFKGWGSKKPKYPNSSPL-KAKN 379
Query: 176 QRIEIQIFPR 185
+R+EI I
Sbjct: 380 RRVEITILNN 389
>gi|126727642|ref|ZP_01743474.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
gi|126703058|gb|EBA02159.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
Length = 199
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 6/133 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D E + G+ V G + + K +L A N
Sbjct: 69 DGVEGYMTPNVNRNGVPVCHRGSACGVMDADTLFATDRYRITSKGRALL---ADFFNSSS 125
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I HTDS + + N+ +SQ RA+ + + R + +R + + P TN
Sbjct: 126 AAAYVIVGHTDSRASDEYNMRLSQNRANAVANVASS---LGARVVDIRHYGERMPRATNR 182
Query: 168 TKVGRQNNQRIEI 180
T GRQ N+R+EI
Sbjct: 183 TAAGRQANRRVEI 195
>gi|332291441|ref|YP_004430050.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332169527|gb|AEE18782.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 649
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 5/118 (4%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + + L+ + ++ ++P+ I ++SHTDS N+ +SQ
Sbjct: 532 ILELNPIYFDFDKSNIRPDASLELEKVIAVMQQYPALKIDVRSHTDSRAPDAYNMKLSQR 591
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
R Y++Q+G ++ RG+ + T+ Q N+R E I +
Sbjct: 592 RNVSTIRYIVQQGGIEAYRLTGRGYGETQLTNACANGIECTEEEHQLNRRSEFIIMAK 649
>gi|293605866|ref|ZP_06688236.1| OmpA family protein [Achromobacter piechaudii ATCC 43553]
gi|292815653|gb|EFF74764.1| OmpA family protein [Achromobacter piechaudii ATCC 43553]
Length = 216
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 58/154 (37%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ + E L + + I+ + ++ L+ + +L+ +
Sbjct: 56 QEETQRRETLEQALAGPLAAGRVTLINGRIGIS---GSVLFALNSDQLQPEGREILKTLI 112
Query: 101 TILNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRF 151
L + ++ + +TD + +N +S +RA + LI GV S
Sbjct: 113 EPLAAYLKTHDEILMVSGYTDDQQVREGNRRFADNWDLSAQRALTVTRALIDEGVPSATV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+ +N + GR N+R+EI P+
Sbjct: 173 FAAA-FGSEQPVASNADEEGRAKNRRVEITPIPK 205
>gi|167818291|ref|ZP_02449971.1| hypothetical protein Bpse9_24346 [Burkholderia pseudomallei 91]
gi|167913436|ref|ZP_02500527.1| hypothetical protein Bpse112_23310 [Burkholderia pseudomallei 112]
Length = 393
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 8/183 (4%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIV 64
+ I + GC + + + + + + + ++ +
Sbjct: 211 AVLSLIALGLFGCFKYALSTRSADVQQRIAAIARMAPPAAPAELRLATLLAGEIAAGTLS 270
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + F + P+++ IA + K P + ++ +TD+
Sbjct: 271 VEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPG-KVTVRGYTDNQPIK 329
Query: 124 KNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
S+ERA + L GV ++R + G PI N T GR N+R+E
Sbjct: 330 SRQFASNEALSEERATQVMQMLQSAGVPASR-LEALGKGGAEPIGDNRTPQGRALNRRVE 388
Query: 180 IQI 182
I +
Sbjct: 389 ITV 391
>gi|254249905|ref|ZP_04943225.1| Outer membrane protein [Burkholderia cenocepacia PC184]
gi|124876406|gb|EAY66396.1| Outer membrane protein [Burkholderia cenocepacia PC184]
Length = 221
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L L + + + + + TDS+G+ NL +S+ RA+ +
Sbjct: 116 DALFATDHATLAPTARESLDRLLSERADRTYSQVTVTGFTDSVGSDDYNLALSKRRAEAV 175
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++ ++V G P+ +N T GR +N+R+EI++
Sbjct: 176 AA-YLKAHGLKTDSMTVSGRGKADPVASNATPEGRASNRRVEIRL 219
>gi|323699159|ref|ZP_08111071.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323459091|gb|EGB14956.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 351
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + + +P+L+ IL + + I HTDS GT N +S+ RA+ + +
Sbjct: 250 FGFDKYQITDEMVPVLEQAKMILEEDTAATYEISGHTDSTGTEAYNQGLSERRANSVMKW 309
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L GVS++R + +G+ P N TK GR+ N+R+EIQ
Sbjct: 310 LTDNGVSADR-LEAKGYGELAPKYDNATKEGRKLNRRVEIQ 349
>gi|332300760|ref|YP_004442681.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
gi|332177823|gb|AEE13513.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
Length = 296
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ I + L + +L +A ++ P + I+ HT G N +
Sbjct: 187 EEIEKNFNAAKFVQGKADLTDETKFVLHDLAKLMEANPDLKLKIEGHTSEEGDEAFNQRL 246
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S+ERA V +LI + S + G PID N+ +V N+R E +
Sbjct: 247 SEERAQVAVDFLISQ-GISADRLQAEGKGSSEPIDPNNPEV----NRRTEFIVI 295
>gi|323496692|ref|ZP_08101743.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
gi|323318274|gb|EGA71234.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
Length = 204
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 10/189 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L + + + A + + + D + D + + +T
Sbjct: 1 MKSL-IMIPLSVLAVAVTTAVSAQDEYDYIDTPVADQIADLTDDDRDGVVNA-RDICPNT 58
Query: 62 --GIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
G V G + + + F +Q +A L K+ S I IQ
Sbjct: 59 PLGAQVDNDGCGESLKTEEERQLRILFANDSYEINPIFSDQIQTMAEFLEKYQSASIQIQ 118
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+G + NL +S++RA ++ L+ V +R +S+ G+ D +
Sbjct: 119 GFASKVGEPEYNLELSKKRAHAVEDELLSYYVEPSR-VSIIGYGETRLEAQGDDETSHAL 177
Query: 175 NQRIEIQIF 183
N+++ +
Sbjct: 178 NRKVTATVV 186
>gi|53721204|ref|YP_110189.1| hypothetical protein BPSS0168 [Burkholderia pseudomallei K96243]
gi|76819105|ref|YP_336847.1| hypothetical protein BURPS1710b_A1690 [Burkholderia pseudomallei
1710b]
gi|126443128|ref|YP_001061334.1| hypothetical protein BURPS668_A0328 [Burkholderia pseudomallei 668]
gi|134280864|ref|ZP_01767574.1| OmpA domain protein [Burkholderia pseudomallei 305]
gi|217423202|ref|ZP_03454704.1| OmpA family protein [Burkholderia pseudomallei 576]
gi|226198699|ref|ZP_03794263.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|254263222|ref|ZP_04954087.1| OmpA domain protein [Burkholderia pseudomallei 1710a]
gi|52211618|emb|CAH37613.1| OmpA family membrane protein [Burkholderia pseudomallei K96243]
gi|76583578|gb|ABA53052.1| OmpA domain protein [Burkholderia pseudomallei 1710b]
gi|126222619|gb|ABN86124.1| OmpA domain protein [Burkholderia pseudomallei 668]
gi|134247886|gb|EBA47970.1| OmpA domain protein [Burkholderia pseudomallei 305]
gi|217394110|gb|EEC34130.1| OmpA family protein [Burkholderia pseudomallei 576]
gi|225929139|gb|EEH25162.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|254214224|gb|EET03609.1| OmpA domain protein [Burkholderia pseudomallei 1710a]
Length = 421
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 8/183 (4%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIV 64
+ I + GC + + + + + + + ++ +
Sbjct: 239 AVLSLIALGLFGCFKYALSTRSADVQQRIAAIARMAPPAAPAELRLATLLAGEIAAGTLS 298
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + F + P+++ IA + K P + ++ +TD+
Sbjct: 299 VEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPG-KVTVRGYTDNQPIK 357
Query: 124 KNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
S+ERA + L GV ++R + G PI N T GR N+R+E
Sbjct: 358 SRQFASNEALSEERATQVMQMLQSAGVPASR-LEALGKGGAEPIGDNRTPQGRALNRRVE 416
Query: 180 IQI 182
I +
Sbjct: 417 ITV 419
>gi|167741105|ref|ZP_02413879.1| hypothetical protein Bpse14_23766 [Burkholderia pseudomallei 14]
Length = 394
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 8/183 (4%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIV 64
+ I + GC + + + + + + + ++ +
Sbjct: 212 AVLSLIALGLFGCFKYALSTRSADVQQRIAAIARMAPPAAPAELRLATLLAGEIAAGTLS 271
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + F + P+++ IA + K P + ++ +TD+
Sbjct: 272 VEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPG-KVTVRGYTDNQPIK 330
Query: 124 KNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
S+ERA + L GV ++R + G PI N T GR N+R+E
Sbjct: 331 SRQFASNEALSEERATQVMQMLQSAGVPASR-LEALGKGGAEPIGDNRTPQGRALNRRVE 389
Query: 180 IQI 182
I +
Sbjct: 390 ITV 392
>gi|157737823|ref|YP_001490507.1| OmpA/MotB precursor [Arcobacter butzleri RM4018]
gi|315637613|ref|ZP_07892819.1| lipoprotein [Arcobacter butzleri JV22]
gi|157699677|gb|ABV67837.1| OmpA/MotB precursor [Arcobacter butzleri RM4018]
gi|315478067|gb|EFU68794.1| lipoprotein [Arcobacter butzleri JV22]
Length = 174
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 17/182 (9%)
Query: 2 IKELGL---SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+LGL + + +GC + + V + + G+ L+KA + +
Sbjct: 1 MKKLGLYSVLVSALLFTTGCSEKNADVDNVVGANDAASVEAPIQDGTLLEKASNGNYYMI 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHT 117
+++ + L A+ L+ T + + +T
Sbjct: 61 NGQRVLIE-----------HVYFGFDKYNLTADNKSKAVSNASKLSAVSSDTTVKVLGNT 109
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ + N + +RA+ +K L+ GV++N IS+ P+ T TK N+R
Sbjct: 110 DEWGSDEYNYALGLKRANAVKDVLVANGVTTN--ISLVSLGESNPVCTEKTKDCWAQNRR 167
Query: 178 IE 179
+E
Sbjct: 168 VE 169
>gi|115360943|ref|YP_778080.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115286271|gb|ABI91746.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 239
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/219 (13%), Positives = 59/219 (26%), Gaps = 41/219 (18%)
Query: 3 KELGLSMFIMTT-ISGCGLASREK------------------------------------ 25
K + L++ ++ C AS
Sbjct: 21 KNIQLALLASVVSLAACSSASGPTYNAYELQSRDGIRTFRVDCHGILSSAKTCMKVATRM 80
Query: 26 --KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
T + S+ + + + ++
Sbjct: 81 CGNDAVRVVDATTPYRDGADPHSMVFQCGAAPVPVAAAVAPAPAAVEKVSLT-GDAYFAT 139
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L L + + + +TD+ G+ +N +S+ RAD + +YL +
Sbjct: 140 DSAVLTSAATAALDKLLNQQGDRHFARVDVDGYTDATGSAAHNQALSKRRADAVAAYLRE 199
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G P +NDT GR N+R+EI +
Sbjct: 200 -HGLKADAFAATGHGEANPAASNDTAEGRARNRRVEISL 237
>gi|327485675|gb|AEA80081.1| Protein F-like protein [Vibrio cholerae LMA3894-4]
Length = 182
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 3/150 (2%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFL 93
T ++ + ++ + L GI + GD + V +
Sbjct: 30 TSVMPNAMTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASK 89
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L +A L I ++ HTD+ G+ K N +++ RA+ +K+ L+Q V N I
Sbjct: 90 QWLDTVARFLATESGIDIVLEGHTDNTGSEKLNDKLAERRANAVKAALVQSRVVQN-AIY 148
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RGF P TN TK GR N+R+EI+
Sbjct: 149 TRGFGENVPACTNSTKNGRACNRRVEIRFI 178
>gi|126457554|ref|YP_001074280.1| hypothetical protein BURPS1106A_A0237 [Burkholderia pseudomallei
1106a]
gi|242313025|ref|ZP_04812042.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|254195472|ref|ZP_04901900.1| OmpA domain protein [Burkholderia pseudomallei S13]
gi|126231322|gb|ABN94735.1| OmpA family protein [Burkholderia pseudomallei 1106a]
gi|169652219|gb|EDS84912.1| OmpA domain protein [Burkholderia pseudomallei S13]
gi|242136264|gb|EES22667.1| OmpA family protein [Burkholderia pseudomallei 1106b]
Length = 421
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 8/183 (4%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIV 64
+ I + GC + + + + + + + ++ +
Sbjct: 239 AVLSLIALGLFGCFKYALSTRSADVQQRIAAIARMAPPAAPAELRLATLLAGEIAAGTLS 298
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + F + P+++ IA + K P + ++ +TD+
Sbjct: 299 VEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPG-KVTVRGYTDNQPIK 357
Query: 124 KNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
S+ERA + L GV ++R + G PI N T GR N+R+E
Sbjct: 358 SRQFASNEALSEERATQVMQMLQSAGVPASR-LEALGKGGAEPIGDNRTPQGRALNRRVE 416
Query: 180 IQI 182
I +
Sbjct: 417 ITV 419
>gi|167826676|ref|ZP_02458147.1| hypothetical protein Bpseu9_23575 [Burkholderia pseudomallei 9]
Length = 390
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 8/183 (4%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIV 64
+ I + GC + + + + + + + ++ +
Sbjct: 208 AVLSLIALGLFGCFKYALSTRSADVQQRIAAIARMAPPAAPAELRLATLLAGEIAAGTLS 267
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + F + P+++ IA + K P + ++ +TD+
Sbjct: 268 VEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPG-KVTVRGYTDNQPIK 326
Query: 124 KNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
S+ERA + L GV ++R + G PI N T GR N+R+E
Sbjct: 327 SRQFASNEALSEERATQVMQMLQSAGVPASR-LEALGKGGAEPIGDNRTPQGRALNRRVE 385
Query: 180 IQI 182
I +
Sbjct: 386 ITV 388
>gi|2062640|gb|AAC35418.1| CadF precursor [Campylobacter coli]
Length = 326
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ G T H F +V + F ++ IA +L++ ++ HTD+I
Sbjct: 204 EGAMLDENGCEKTISFEGHFGF-DKVDINPAFEEKIKEIAQLLDENARYDTILEGHTDNI 262
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ N +S+ RA+ + +++ I G+ P N+TK GR +N+R++
Sbjct: 263 GSRAYNQKLSERRAESVAKE-LEKFGVDKDRIQTVGYGQDKPRSRNETKEGRADNRRVD 320
>gi|89068039|ref|ZP_01155456.1| OmpA/MotB family protein [Oceanicola granulosus HTCC2516]
gi|89046278|gb|EAR52335.1| OmpA/MotB family protein [Oceanicola granulosus HTCC2516]
Length = 173
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 17/157 (10%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+ + N GS+ D + + Q + + V +
Sbjct: 26 ADGAGVPAAPAPVTNPGAGSAADPSSPAYFQQTIGDRV----------------LFLVDQ 69
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L + +L A L I+ H D GT + NL + RA+ ++ YL+ +G
Sbjct: 70 YTLTPEGRAVLDGQARWLQANADYRAVIEGHADEQGTREYNLALGSRRANAVREYLVSQG 129
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V S+R +V + + P++ + N+R I
Sbjct: 130 VPSSRLQTVT-YGKERPLEVCSAESCYAQNRRAVTVI 165
>gi|283786225|ref|YP_003366090.1| outer membrane lipoprotein [Citrobacter rodentium ICC168]
gi|282949679|emb|CBG89298.1| outer membrane lipoprotein [Citrobacter rodentium ICC168]
Length = 160
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 58/174 (33%), Gaps = 26/174 (14%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
+F ++GC K E +Q G
Sbjct: 10 IFTALLLTGCQAPQG-------------------------KFSPEQVAAMQTYGFT-ESA 43
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
GD + ++ L + +Q +A L + HTD+ G N
Sbjct: 44 GDWSLGMSDTILFDKNDYTLRAQSRQQIQAMAARLASVGLKHARMDGHTDNYGEESYNEA 103
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S +RA+V+ + ++ +G KYPI +N T GR N+R+ + I
Sbjct: 104 LSLKRANVVADAWAEGAQIPRSNLTTQGLGKKYPIASNKTAKGRAENRRVAVVI 157
>gi|227536324|ref|ZP_03966373.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Sphingobacterium spiritivorum ATCC 33300]
gi|227243821|gb|EEI93836.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Sphingobacterium spiritivorum ATCC 33300]
Length = 650
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + + + P+L + + P+ I + SHTDS T K N+ +SQ R
Sbjct: 535 FVLENIYYDLDKYNIREDAKPILNQLVRTMRDNPTLKIELSSHTDSRATAKYNMKLSQNR 594
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
A Y++ RG++ +R + +G+ ++ + Q N+R EI++
Sbjct: 595 AQAAVDYIVSRGIARDRIV-AKGYGESKLVNKCADGVKCSDAEHQANRRTEIKVL 648
>gi|89075158|ref|ZP_01161594.1| putative outer membrane protein [Photobacterium sp. SKA34]
gi|89049112|gb|EAR54678.1| putative outer membrane protein [Photobacterium sp. SKA34]
Length = 196
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 77/190 (40%), Gaps = 9/190 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + +++ + ++ GC L+ + K + A+ + +
Sbjct: 1 MKYV-ITVLLSFSLFGCSLSVPQPPITKQTKDLYDADSDGVINQRDRCADTPIDAVVDND 59
Query: 62 GIV--VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G V + + + + ++ + ++ L K+P T I ++ +
Sbjct: 60 GCPTFVKNSEENNI----HVLFANDSSEIPESYMENISNMSEFLTKYPKTHIELKGYASP 115
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+G N+ +S+ RA VI+ LI G+ +R ++ GF P+ +D + ++R+
Sbjct: 116 VGNTAYNVELSKRRAAVIRQALITEGIVPSRIKTI-GFGDSDPVKASDVEESNALSRRVV 174
Query: 180 IQIF-PRGNI 188
Q+ +GN+
Sbjct: 175 AQVVGSQGNV 184
>gi|315608144|ref|ZP_07883136.1| lipoprotein PG3 [Prevotella buccae ATCC 33574]
gi|315250113|gb|EFU30110.1| lipoprotein PG3 [Prevotella buccae ATCC 33574]
Length = 238
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 7/159 (4%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSFV- 83
+ G +DK + E + Q+ + + + + + F
Sbjct: 67 GAAIGAVVGGTAGNLIGRHMDKVKKEVEQQVSNAKVEEVTDANGLKAVKVTFDSGLLFPL 126
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
++ L L AT+L P + IQ +TD G K N+ +SQ RA+ + SYL +
Sbjct: 127 NKSTLSASSKTELAKFATVLKNDPQLAVDIQGYTDRTGGDKINIPLSQSRAESVASYLRK 186
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+GV S+ F +V GF I + Q N+R+E+ +
Sbjct: 187 QGVGSSSFKNVTGFGSANEI---ENAAVSQVNRRVEVYL 222
>gi|126737228|ref|ZP_01752963.1| peptidoglycan-associated lipoprotein [Roseobacter sp. SK209-2-6]
gi|126721813|gb|EBA18516.1| peptidoglycan-associated lipoprotein [Roseobacter sp. SK209-2-6]
Length = 172
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 66/176 (37%), Gaps = 25/176 (14%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ L + ++ +S C A + + + GS+LD A + Q
Sbjct: 11 LKKATL-LAVVLGLSACSNAVWDN-------AGGSGTGTSPGGSNLDPASPAYFQQEVGD 62
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + V + L + +LQ A L P V+ IQ H D G
Sbjct: 63 RV----------------LFPVDQSTLSAEATTILQGQARWLTANPDYVVTIQGHADEQG 106
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
T + NL + RA+ + +LI + + I V F + P++ + N+R
Sbjct: 107 TREYNLALGARRANEARDFLIGQ-GIAGTRIQVVSFGKERPLEICSAESCYAKNRR 161
>gi|300692236|ref|YP_003753231.1| peptidoglycan-associated lipoprotein, protein pal, component of
tol-pal system [Ralstonia solanacearum PSI07]
gi|299079296|emb|CBJ51968.1| Peptidoglycan-associated lipoprotein, protein pal, component of
tol-pal system [Ralstonia solanacearum PSI07]
Length = 172
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 51/163 (31%), Gaps = 14/163 (8%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + + R +D DE
Sbjct: 22 CSSGVKLDDTSKNATGGAATGADTRNVMPVDATRDEL-------------TDPNSPLAKR 68
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ ++ +L A L + IQ +TD GT + NL + Q+RA+ +
Sbjct: 69 SVYFDFDSYTVKPEYQGLLTQHARYLQSHNQRKVLIQGNTDERGTSEYNLALGQKRAEAV 128
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ L GV ++ +V + P T + N+R +I
Sbjct: 129 RRALSSLGVPDSQMEAVS-LGKEKPQATGHDEESWAQNRRSDI 170
>gi|153837108|ref|ZP_01989775.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|149749696|gb|EDM60441.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
Length = 325
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++ L ++N +P + I ++D+ G+ + N ++++RA + +
Sbjct: 215 FGLESAEVKDAS--ALSGTVDLMNTYPQAKVEITGYSDTTGSAQYNQQLTEKRAKAVANE 272
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+G++++R +V+G P+ +N+T+ GR+ N+R+E+ +
Sbjct: 273 FEAKGIAADRM-TVKGMGEANPVASNETRQGREANRRVEVVV 313
>gi|157960967|ref|YP_001501001.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157845967|gb|ABV86466.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 198
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 65/204 (31%), Gaps = 29/204 (14%)
Query: 1 MIKELGLSMFIMTTIS---------------------GCGLASREKKKVFLHKSNDTDIV 39
MI +L L + + T +S C + + +
Sbjct: 1 MIAKLALLLIVSTLLSTPLVTKQWQDSDLDGVPDLKDACAATPPNR---VVDAKGCDKAL 57
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ G L D + ++ + +++I
Sbjct: 58 LNKRGPMLSILPDLCLRTSDGKRYPAACS----KLSSISVKFGFAQADILPSQEQTIEVI 113
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A L I + HTDSIG NL +S +RA+ +K +++ + + G
Sbjct: 114 ARWLKST-RVSIQLVGHTDSIGDASFNLQLSLKRAEQVKKVFVEQFGFAADRFQINGVGS 172
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF 183
P+ N T GR+ N+R+E +
Sbjct: 173 SLPVANNQTAFGREQNRRVEFLVI 196
>gi|145588462|ref|YP_001155059.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145046868|gb|ABP33495.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 167
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 53/177 (29%), Gaps = 25/177 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L ++ C + ++ + ++
Sbjct: 12 FALIGATAFLMAACSSVKLDDVDGANGSGGSGSYGSQPWNDPKSPLFEK----------- 60
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
E ++ K+ ML A+ L P I IQ +TD GT +
Sbjct: 61 -------------SVYFGFDEYTVQTKYQKMLSAHASYLKANPKQKIIIQGNTDERGTAE 107
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL + Q R+D + + S+ + F + P D++ N+R +I
Sbjct: 108 YNLALGQRRSDAV-RKSLNLMGVSDDQMEAVSFGKEKPKAEGDSEAAFAENRRADIV 163
>gi|328470084|gb|EGF40995.1| putative outer membrane protein OmpA [Vibrio parahaemolyticus
10329]
Length = 325
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++ L ++N +P + I ++D+ G+ + N ++++RA + +
Sbjct: 215 FGLESAEVKDAS--ALSGTVDLMNTYPQAKVEITGYSDTTGSAQYNQQLTEKRAKAVANE 272
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+G++++R +V+G P+ +N+T+ GR+ N+R+E+ +
Sbjct: 273 FEAKGIAADRM-TVKGMGEANPVASNETRQGREANRRVEVVV 313
>gi|319955585|ref|YP_004166852.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319424245|gb|ADV51354.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 275
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 9/180 (5%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE--FQMQLQDTGIVVSRIGDMI 72
I+ ++EK K L K + + N + + + D V+ D
Sbjct: 83 ITVMSNKTKEKMKATLSKVDPALLANAKTMEDSINLAISYNLKKSIADDEDDVNINIDKT 142
Query: 73 TCYIPVH---VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKN 125
I + + + K +L+ IA ++N PS + ++ HTDS ++
Sbjct: 143 VVMINISDKLLFNSGSYTVSNKANNILKKIADVINSEPSMEVMVEGHTDSRTIQTPMFQD 202
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA + L ++ + + G + P+ ND+K R N+R I I P
Sbjct: 203 NWDLSVKRATSVVRILQKKYNVAPEKLIASGRSSFLPLVENDSKENRSKNRRTRIVIIPN 262
>gi|269139251|ref|YP_003295952.1| OmpA/MotB domain protein [Edwardsiella tarda EIB202]
gi|267984912|gb|ACY84741.1| OmpA/MotB domain protein [Edwardsiella tarda EIB202]
Length = 162
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ LQ G + G + ++ L + + + L++
Sbjct: 28 TFSPQQIAVLQQQGFTPTPEGWSFGMS-EKVLFGNNQATLRPESQAHVAELGHALSQVAI 86
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ +TD+ GT + N +S +RAD + + G+ ++ RG PI N T
Sbjct: 87 LHARLDGYTDNYGTDQYNQQLSLKRADKVADAMASGGMPRAN-LTTRGMGKSNPIADNAT 145
Query: 169 KVGRQNNQRIEIQI 182
+ GR N+R+ I I
Sbjct: 146 RQGRAENRRVAIVI 159
>gi|124005444|ref|ZP_01690285.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123989266|gb|EAY28844.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 300
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Query: 74 CYIPVHVSFVSEVFL-EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ L + + L + + L K P I HTD+ G NL IS +
Sbjct: 188 FVLHEVYFESGSTELHDARSEEELMRLVSFLKKHPKLKGEIAGHTDNTGRAAANLQISTQ 247
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + YL + GV + I RG+ P N+ V R+ N+RIE +I
Sbjct: 248 RAYSVYKYLTKNGVKPAQLIY-RGYGATRPKFPNNNPVNRRKNRRIEFKIL 297
>gi|187477259|ref|YP_785283.1| hypothetical protein BAV0750 [Bordetella avium 197N]
gi|115421845|emb|CAJ48363.1| probable outer membrane protein [Bordetella avium 197N]
Length = 216
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 51/155 (32%), Gaps = 11/155 (7%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ + E + L + + + I + ++ L+ + +L +A
Sbjct: 56 QAETQRRETLEQALAVPLAGGRVTL--VDGRIGIS-GSVLFALNSDQLQPEGRELLMSLA 112
Query: 101 TILNKF---PSTVIAIQSHTDSIGTLKNNLLISQERADVIKS-----YLIQRGVSSNRFI 152
L + ++ + TD+ ++N S + + +
Sbjct: 113 EPLKTYLQSRDEILMVSGFTDNQRVSEHNRRFSDNWELSAQRALTVTRALIDAGIPASSL 172
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
F + P+ +ND G+ N+R+EI PR
Sbjct: 173 FAAAFGSEQPVASNDDAEGQAKNRRVEIAPVPRQT 207
>gi|28900103|ref|NP_799758.1| putative outer membrane protein OmpA [Vibrio parahaemolyticus RIMD
2210633]
gi|260365754|ref|ZP_05778250.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
gi|260880676|ref|ZP_05893031.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|260897717|ref|ZP_05906213.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|260899371|ref|ZP_05907766.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|28808386|dbj|BAC61591.1| putative outer membrane protein OmpA [Vibrio parahaemolyticus RIMD
2210633]
gi|308086262|gb|EFO35957.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|308092198|gb|EFO41893.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|308109307|gb|EFO46847.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|308114934|gb|EFO52474.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
Length = 325
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++ L ++N +P + I ++D+ G+ + N ++++RA + +
Sbjct: 215 FGLESAEVKDAS--ALSGTVDLMNTYPQAKVEITGYSDTTGSAQYNQQLTEKRAKAVANE 272
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+G++++R +V+G P+ +N+T+ GR+ N+R+E+ +
Sbjct: 273 FEAKGIAADRM-TVKGMGEANPVASNETRQGREANRRVEVVV 313
>gi|84516634|ref|ZP_01003993.1| OmpA family protein [Loktanella vestfoldensis SKA53]
gi|84509670|gb|EAQ06128.1| OmpA family protein [Loktanella vestfoldensis SKA53]
Length = 218
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 9/177 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + + T+S CG ++I FG++ + Q
Sbjct: 1 MKRYMSTALVAATLSACG--PSGPTSSSFFTEAGSEIDQGDFGNA--TMNNALVQTRQQD 56
Query: 62 -GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I ++R + + L+ L+ A + +FP + HTD +
Sbjct: 57 YTINLARRFNTEVDAMVN--FEFDSAILDSLAQATLRQQADWIRQFPEVRFKVFGHTDLV 114
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ + N + RA + YL +G+S +R +V F P+ T + N+R
Sbjct: 115 GSAEYNRNLGLRRAQAVVGYLSTQGISRDRLEAVVSFGATQPLIP--TPEPERRNRR 169
>gi|313677408|ref|YP_004055404.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312944106|gb|ADR23296.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 680
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 57/148 (38%), Gaps = 8/148 (5%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC----YIPVHVSFVSEVFLEKKFLPML 96
G ++DK + + + + + I + + L
Sbjct: 492 STVGKTVDK--SQLTSLITNKVFETEILLEEIILDKAFELENIYYDFDSANIRADAAIEL 549
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ TIL P I + SHTD+ G N +S+ RA+ +Y+I +G+ +R I RG
Sbjct: 550 DKLVTILKDNPPIKIELSSHTDARGEAAYNQELSKRRAESAVAYIISQGIDPSR-IKARG 608
Query: 157 FAYKYPID-TNDTKVGRQNNQRIEIQIF 183
+ I T+ + N+R E ++
Sbjct: 609 YGESQLIIEDAQTEEEHETNRRTEFKVT 636
>gi|261210344|ref|ZP_05924639.1| outer membrane protein A precursor [Vibrio sp. RC341]
gi|260840571|gb|EEX67132.1| outer membrane protein A precursor [Vibrio sp. RC341]
Length = 293
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 64 VVSRIGDMITCYI-PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V D++ + + L+ L ++ L S + ++ H+DS+G+
Sbjct: 176 EVEVAQDVVRQEFVGEKLFAFNSSELKASS--SLDMMMDALMANESLSLTLEGHSDSVGS 233
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ N +S+ RA + Y I G+ ++R I+V G + P+ +ND+ +GR N+R+
Sbjct: 234 EEYNQALSERRAQAVAEYFILNGIDASR-ITVMGKGSQEPVASNDSDIGRAQNRRV 288
>gi|170025766|ref|YP_001722271.1| hypothetical protein YPK_3551 [Yersinia pseudotuberculosis YPIII]
gi|169752300|gb|ACA69818.1| type IV / VI secretion system protein, DotU family [Yersinia
pseudotuberculosis YPIII]
Length = 536
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 11/147 (7%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVFLEKKF--LPMLQLIAT 101
+ ++ + L + + V + + + E L ++F ++ +
Sbjct: 361 NIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSDGAFRTGEATLSEEFINKKNIERLGL 420
Query: 102 ILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVS---SNRFISV 154
L +P I + HTD+ NNL +S RA V+ L + R IS
Sbjct: 421 ALAPWPG-DIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINETHQREISA 479
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G P+ N T+ GR+ N+R++I
Sbjct: 480 IGRGESDPLADNATEEGRKRNRRVDIL 506
>gi|167908679|ref|ZP_02495884.1| hypothetical protein BpseN_41039 [Burkholderia pseudomallei NCTC
13177]
Length = 395
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 8/183 (4%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIV 64
+ I + GC + + + + + + + ++ +
Sbjct: 213 AVLSLIALGLFGCFKYALSTRSADVQQRIAAIARMAPPAAPAELRLATLLAGEIAAGTLS 272
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + F + P+++ IA + K P + ++ +TD+
Sbjct: 273 VEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPG-KVTVRGYTDNQPIK 331
Query: 124 KNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
S+ERA + L GV ++R + G PI N T GR N+R+E
Sbjct: 332 SRQFASNEALSEERATQVMQMLQSAGVPASR-LEALGKGGAEPIGDNRTPQGRALNRRVE 390
Query: 180 IQI 182
I +
Sbjct: 391 ITV 393
>gi|315124911|ref|YP_004066915.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|315018633|gb|ADT66726.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
Length = 319
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ G T + H F + + F ++ IA +L++ ++ HTD+I
Sbjct: 197 EGALLDENGCEKTISLEGHFGF-DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI 255
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ N +S+ RA + + +++ I G+ +NDTK GR +N+R++
Sbjct: 256 GSRAYNQKLSERRAKSVANE-LEKYGVEKSRIKTVGYGQDNSRSSNDTKEGRADNRRVD 313
>gi|288925106|ref|ZP_06419042.1| lipoprotein PG3 [Prevotella buccae D17]
gi|288338296|gb|EFC76646.1| lipoprotein PG3 [Prevotella buccae D17]
Length = 238
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 7/159 (4%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSFV- 83
+ G +DK + E + Q+ + + + + + F
Sbjct: 67 GAAIGAVVGGTAGNLIGRHMDKVKKEVEQQVSNAKVEEVTDANGLKAVKVTFDSGLLFPL 126
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
++ L L AT+L P + IQ +TD G K N+ +SQ RA+ + SYL +
Sbjct: 127 NKSTLSASSKTELAKFATVLKNDPQLAVDIQGYTDRTGGDKINIPLSQSRAESVASYLRK 186
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+GV S+ F +V GF I + Q N+R+E+ +
Sbjct: 187 QGVGSSSFKNVTGFGSANEI---ENAAISQVNRRVEVYL 222
>gi|145600375|ref|YP_001164451.1| OmpA-family membrane protein [Yersinia pestis Pestoides F]
gi|145212071|gb|ABP41478.1| OmpA-family membrane protein [Yersinia pestis Pestoides F]
Length = 529
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 11/147 (7%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVFLEKKF--LPMLQLIAT 101
+ ++ + L + + V + + + E L ++F ++ +
Sbjct: 354 NIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSDGAFRTGEATLSEEFINKKNIERLGL 413
Query: 102 ILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVS---SNRFISV 154
L +P I + HTD+ NNL +S RA V+ L + R IS
Sbjct: 414 ALAPWPG-DIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINETHQREISA 472
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G P+ N T+ GR+ N+R++I
Sbjct: 473 IGRGESDPLADNATEEGRKRNRRVDIL 499
>gi|108809572|ref|YP_653488.1| hypothetical protein YPA_3581 [Yersinia pestis Antiqua]
gi|108810554|ref|YP_646321.1| OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|150260448|ref|ZP_01917176.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125]
gi|165928091|ref|ZP_02223923.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165937799|ref|ZP_02226360.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166008916|ref|ZP_02229814.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166211978|ref|ZP_02238013.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167401306|ref|ZP_02306806.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421902|ref|ZP_02313655.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426473|ref|ZP_02318226.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167467268|ref|ZP_02331972.1| hypothetical protein YpesF_05092 [Yersinia pestis FV-1]
gi|218927713|ref|YP_002345588.1| hypothetical protein YPO0514 [Yersinia pestis CO92]
gi|229836901|ref|ZP_04457066.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A]
gi|229840403|ref|ZP_04460562.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842483|ref|ZP_04462638.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229900741|ref|ZP_04515865.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|270487887|ref|ZP_06204961.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294502609|ref|YP_003566671.1| hypothetical protein YPZ3_0499 [Yersinia pestis Z176003]
gi|108774202|gb|ABG16721.1| OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|108781485|gb|ABG15543.1| putative OmpA-family membrane protein [Yersinia pestis Antiqua]
gi|115346324|emb|CAL19195.1| putative OmpA-family membrane protein [Yersinia pestis CO92]
gi|149289856|gb|EDM39933.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125]
gi|165914211|gb|EDR32827.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165919952|gb|EDR37253.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992255|gb|EDR44556.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206724|gb|EDR51204.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960039|gb|EDR56060.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049331|gb|EDR60739.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167054571|gb|EDR64379.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229682080|gb|EEO78172.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|229690793|gb|EEO82847.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696769|gb|EEO86816.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229705844|gb|EEO91853.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A]
gi|262360640|gb|ACY57361.1| hypothetical protein YPD4_0452 [Yersinia pestis D106004]
gi|270336391|gb|EFA47168.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294353068|gb|ADE63409.1| hypothetical protein YPZ3_0499 [Yersinia pestis Z176003]
Length = 536
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 11/147 (7%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVFLEKKF--LPMLQLIAT 101
+ ++ + L + + V + + + E L ++F ++ +
Sbjct: 361 NIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSDGAFRTGEATLSEEFINKKNIERLGL 420
Query: 102 ILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVS---SNRFISV 154
L +P I + HTD+ NNL +S RA V+ L + R IS
Sbjct: 421 ALAPWPG-DIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINETHQREISA 479
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G P+ N T+ GR+ N+R++I
Sbjct: 480 IGRGESDPLADNATEEGRKRNRRVDIL 506
>gi|113868486|ref|YP_726975.1| outer membrane protein and related peptidoglycan-associated
proteins [Ralstonia eutropha H16]
gi|113527262|emb|CAJ93607.1| outer membrane protein and related peptidoglycan-associated
proteins [Ralstonia eutropha H16]
Length = 177
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 25/178 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + +++GC A L+ G
Sbjct: 22 LAAVVLAGLSLAGCQTAPPATG-----------------------LSPAQVAVLKQEGFA 58
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
++ G + + +E ++ + +Q + L + + HTD G+ +
Sbjct: 59 LTDEGWELGLS-DKLLFGFNEDLIDAERAANVQRLGRALKGAGIERLRVDGHTDDAGSAE 117
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S RA+ + L+ + I VRG P+ N T GR N+R+ I +
Sbjct: 118 YNQSLSVRRAEAVAR-LLAGAGFAPENIEVRGRGKSRPVADNRTAAGRSENRRVAIVV 174
>gi|83593142|ref|YP_426894.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
gi|83576056|gb|ABC22607.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
Length = 229
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 15/199 (7%)
Query: 2 IKELGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ L L F M IS L EK K + +S + V K + D + +
Sbjct: 29 MSCLLLGFFAMLASISSVDLVQYEKVKAGIQESIGSREVTKPIEELRQQTGDVIKSLQVE 88
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHT 117
+ + + + + + +P+L+ + LN+ + I IQ HT
Sbjct: 89 DVVGLGQDQQGLVIEFASSAFYEPGSADIRPTAIPVLEQVIATLNEPRYQGFQIEIQGHT 148
Query: 118 DSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
D I +N +S RA + +++ +GV+ R +++ +A P N T G+
Sbjct: 149 DDIPINTAQYPSNWELSGARATRVLRFMLDQGVAKERVLAIA-YADVAPKVPNRTPEGQA 207
Query: 174 ------NNQRIEIQIFPRG 186
N+RI +++FPR
Sbjct: 208 IPLNQELNRRIAVRVFPRA 226
>gi|305665788|ref|YP_003862075.1| OmpA family protein [Maribacter sp. HTCC2170]
gi|88710554|gb|EAR02786.1| OmpA family protein [Maribacter sp. HTCC2170]
Length = 827
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 57 QLQDTGIVVSRIGDMITCYI-------PVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
++ +T + + R+ +MI + + ++ K L + ++ ++P+
Sbjct: 687 EVVNTEVALRRLKEMIAVEDGIRKLKTEMIYFDFDKSYIRKDASEELDKLVQVMTEYPTM 746
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-- 167
VI I+SHTDS G N +S++RA ++Y+I +G+ +NR S G+ + I+ D
Sbjct: 747 VIKIESHTDSRGARVYNKYLSEKRAKSTRAYIISKGIDANRIQSAIGYGEERLINGCDGS 806
Query: 168 ---TKVGRQNNQRIEIQIF 183
++ N+R E I
Sbjct: 807 VRCSEANHLLNRRSEFIIV 825
>gi|304312214|ref|YP_003811812.1| hypothetical protein HDN1F_25860 [gamma proteobacterium HdN1]
gi|301797947|emb|CBL46169.1| Hypothetical protein HDN1F_25860 [gamma proteobacterium HdN1]
Length = 222
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 5/135 (3%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVI 111
+ ++ + V +G I IP F + L + LP+L I + L
Sbjct: 86 ALKAPIERGLVEVEAVGRYIVIRIPEATCFPTNAATLRPQCLPVLVTIRSALQGLEKARY 145
Query: 112 AIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ H+D + +N + RA + L++ S ++ + P+ N
Sbjct: 146 TVAGHSDDVPINTARYSSNWEFAAARAGAVLVELLKATGFSADHFTLASYGPTRPLVANT 205
Query: 168 TKVGRQNNQRIEIQI 182
+ R N+R+E+ +
Sbjct: 206 SADNRARNRRVEVVV 220
>gi|222149664|ref|YP_002550621.1| peptidoglycan-associated lipoprotein [Agrobacterium vitis S4]
gi|221736646|gb|ACM37609.1| peptidoglycan-associated lipoprotein [Agrobacterium vitis S4]
Length = 177
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 2/121 (1%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L G T + + F ++ + L A L ++ I ++ H
Sbjct: 48 LGGAGAATPGSTQDFTVNVGDRIFFDTDSTSIRADAQQTLDRQAQWLQRYSQYPITVEGH 107
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
D GT + NL + RA K+YL+ RG+ +NR ++ + + P+ T D N+
Sbjct: 108 ADERGTREYNLALGARRAASTKAYLVSRGIPANRIKTIS-YGKERPVATCDDISCWSQNR 166
Query: 177 R 177
R
Sbjct: 167 R 167
>gi|145628739|ref|ZP_01784539.1| scaffold protein [Haemophilus influenzae 22.1-21]
gi|144979209|gb|EDJ88895.1| scaffold protein [Haemophilus influenzae 22.1-21]
Length = 153
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 63/179 (35%), Gaps = 33/179 (18%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + L + ++ C ++ + + G S+ +
Sbjct: 1 MNKFVKSLLVAGSVAALAACSSSNND--------AAGNGAAQTFGGYSVADLQQ------ 46
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + +++ +L A LN P+T + ++ +TD
Sbjct: 47 ----------------RYNTVYFGFDKYDITGEYVQILDAHAAYLNATPATKVLVEGNTD 90
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RAD +K YL +GV + + +V + + P + N+R
Sbjct: 91 ERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 148
>gi|51595006|ref|YP_069197.1| hypothetical protein YPTB0655 [Yersinia pseudotuberculosis IP
32953]
gi|153950101|ref|YP_001402377.1| hypothetical protein YpsIP31758_3422 [Yersinia pseudotuberculosis
IP 31758]
gi|186894007|ref|YP_001871119.1| hypothetical protein YPTS_0678 [Yersinia pseudotuberculosis PB1/+]
gi|51588288|emb|CAH19895.1| putative OmpA-family membrane protein [Yersinia pseudotuberculosis
IP 32953]
gi|152961596|gb|ABS49057.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
gi|186697033|gb|ACC87662.1| type IV / VI secretion system protein, DotU family [Yersinia
pseudotuberculosis PB1/+]
Length = 536
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 11/147 (7%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVFLEKKF--LPMLQLIAT 101
+ ++ + L + + V + + + E L ++F ++ +
Sbjct: 361 NIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSDGAFRTGEATLSEEFINKKNIERLGL 420
Query: 102 ILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVS---SNRFISV 154
L +P I + HTD+ NNL +S RA V+ L + R IS
Sbjct: 421 ALAPWPG-DIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINETHQREISA 479
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G P+ N T+ GR+ N+R++I
Sbjct: 480 IGRGESDPLADNATEEGRKRNRRVDIL 506
>gi|260427879|ref|ZP_05781858.1| OmpA/MotB domain protein [Citreicella sp. SE45]
gi|260422371|gb|EEX15622.1| OmpA/MotB domain protein [Citreicella sp. SE45]
Length = 627
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 56/161 (34%), Gaps = 14/161 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ K + + + V GD + E L + +
Sbjct: 469 EDQAKDLERYRSEFFGRLREVI-GNQEGVRIEGDRFVFS-SEVLFAPGEAELSRSGQMEI 526
Query: 97 QLIATILNKFP-------STVIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQR 144
IA+IL +I + HTD I +N +SQ RA + YL+
Sbjct: 527 AKIASILRNVMADIPEGLDWIIRVDGHTDDIPLRPGARFSDNWELSQARALSVVRYLVDF 586
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S GF PID +DT R N+RIE+++ R
Sbjct: 587 LGIPPDRLSANGFGQYQPIDPSDTADARAQNRRIELKLTER 627
>gi|162418688|ref|YP_001607328.1| hypothetical protein YpAngola_A2952 [Yersinia pestis Angola]
gi|162351503|gb|ABX85451.1| OmpA domain protein [Yersinia pestis Angola]
Length = 535
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 11/147 (7%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVFLEKKF--LPMLQLIAT 101
+ ++ + L + + V + + + E L ++F ++ +
Sbjct: 360 NIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSDGAFRTGEATLSEEFINKKNIERLGL 419
Query: 102 ILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVS---SNRFISV 154
L +P I + HTD+ NNL +S RA V+ L + R IS
Sbjct: 420 ALAPWPG-DIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINETHQREISA 478
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G P+ N T+ GR+ N+R++I
Sbjct: 479 IGRGESDPLADNATEEGRKRNRRVDIL 505
>gi|237729519|ref|ZP_04560000.1| OmpA family protein [Citrobacter sp. 30_2]
gi|226908125|gb|EEH94043.1| OmpA family protein [Citrobacter sp. 30_2]
Length = 160
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 1/143 (0%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ K E ++ G GD + ++ L + ++ +A
Sbjct: 17 AGCQAPQGKFTPEQIAAMKSYGFT-EASGDWSLGLSDTILFDKNDYKLRPESEKQIKEMA 75
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ L + HTD+ G N +S +RA+V+ Q ++ +G K
Sbjct: 76 SKLAATGLNHARLDGHTDNYGEDSYNEALSLKRANVVADAWAQGANIPRTNLTTQGLGKK 135
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
YPI +N T GR N+R+ + I
Sbjct: 136 YPIASNQTSKGRAENRRVAVVIT 158
>gi|315634712|ref|ZP_07889996.1| peptidoglycan-associated lipoprotein [Aggregatibacter segnis ATCC
33393]
gi|315476660|gb|EFU67408.1| peptidoglycan-associated lipoprotein [Aggregatibacter segnis ATCC
33393]
Length = 150
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 53/179 (29%), Gaps = 36/179 (20%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + L + ++ CG + E
Sbjct: 1 MNKFTKALLVAGSVAVLAACGSSKNESANGQTFG-------------------------- 34
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G V + + +E ++ +L A LN P+T + I+ +TD
Sbjct: 35 ---GYSVQDLQQR----YNTVYFGFDKYNVEGEYAQILDAHAAYLNATPATNVRIEGNTD 87
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + + RA + + IS + + P + N+R
Sbjct: 88 ERGTPEYNMALGERRAHAV-QSFLTAKGVQAGQISTVSYGEEKPAVLGHDEAAYAKNRR 145
>gi|302035651|ref|YP_003795973.1| putative OmpA/MotB family outer membrane protein [Candidatus
Nitrospira defluvii]
gi|300603715|emb|CBK40046.1| putative Outer membrane protein, OmpA/MotB family [Candidatus
Nitrospira defluvii]
Length = 501
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 59/176 (33%), Gaps = 8/176 (4%)
Query: 16 SGCGLASREKKKVFLHK-SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
S + V ++ N + ++ + I + + G+ +T
Sbjct: 300 SAAQGKDSTRSGVAFPGNPAQSEARNGSIAAVKEELLKVLPGDNRQKTISMRQDGNRLTV 359
Query: 75 YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI---- 129
+ ++ F + L + +L+ I +L + P + + HTD+ K
Sbjct: 360 ALDSNLLFTWGDAALSPEGATILKRIGAVLGQLPDKFVQVAGHTDNQALSKTLQKTFPDN 419
Query: 130 --SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ G G A P+ +N T+ GRQ N+R+E+ I
Sbjct: 420 KALSWARAENARRALVNGGIPADKTKAVGLADTRPLTSNATEQGRQKNRRLELIIV 475
>gi|90022173|ref|YP_528000.1| peptidoglycan-associated lipoprotein [Saccharophagus degradans
2-40]
gi|89951773|gb|ABD81788.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 163
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 63/180 (35%), Gaps = 21/180 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK L + + +SGC + K + +N + + D
Sbjct: 4 IKTLLSLVAVFAFVSGCSSTGKTKGEADTDMNNTVEEQVETVVEVADP------------ 51
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
D + V + L + L + A ++ + + I ++ H D G
Sbjct: 52 -------RDALIGVDTVFYFDFDQAMLRSEARAALLIHAKVIKET-NASIRLEGHADERG 103
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + N+ + + RA+ ++ +L+ + + I + + + N+R+EI+
Sbjct: 104 SREYNMALGERRANAVRDFLVLQ-GVPSYSIETVSYGEERAAQVGSNESAWSKNRRVEIK 162
>gi|319952094|ref|YP_004163361.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319420754|gb|ADV47863.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 370
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
I + E +E + L + T L P + + HTD++G++K N +
Sbjct: 243 QNQLYVIEELLFDFDETSIEIDYNQQLSDLVTYLKSNPKLNVYLYGHTDAMGSVKYNDDL 302
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-PRGNI 188
S++RA + S + + S IS +GF +K P+ +N+ + R N+R+E + P+ N
Sbjct: 303 SEKRAATVAS-FLVKSGLSKNRISWKGFGFKKPVVSNEKEDIRFKNRRVEFLVAEPQSNY 361
Query: 189 KK 190
K
Sbjct: 362 AK 363
>gi|296332050|ref|ZP_06874514.1| flagellar motor protein MotS [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305675555|ref|YP_003867227.1| putative flagellar motor apparatus component [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296150821|gb|EFG91706.1| flagellar motor protein MotS [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305413799|gb|ADM38918.1| putative flagellar motor apparatus component [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 236
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 57/166 (34%), Gaps = 6/166 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ + D + L K + + R + + V
Sbjct: 70 DQTSIEKKNTSPADAKKQEDQQDQLLKKVNTYIKDNHLKAQMTAKRDERGVVLVLQEAVL 129
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADV 136
F E + K +L IA +L P+ I ++ HTDS +N +S RA
Sbjct: 130 FDSGEAKVLKNAETLLHQIAVLLQTIPN-DIQVEGHTDSRNISTYRYPSNWELSAARASG 188
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ Y + ++ G+A P+ N T + N+R+EI I
Sbjct: 189 VIQYFTSKEKLPSKRFIAVGYADTKPVKDNKTNEHMKENRRVEIVI 234
>gi|149190419|ref|ZP_01868691.1| outer membrane protein A [Vibrio shilonii AK1]
gi|148835798|gb|EDL52763.1| outer membrane protein A [Vibrio shilonii AK1]
Length = 343
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
++ + + Q V+ I + V F + + + + L I L ++P T
Sbjct: 202 AEDSKPETQTEPKPVTPIITTRLPEVHSSVLFAFDSE-KIENVEALNPIVYRLTRYPETR 260
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ +TDS G + N +S+ RA+ + ++ S + V G+ P+ NDT
Sbjct: 261 ATVYGYTDSTGPNEYNQSLSERRANAVYE-YLKHAGVSTEQLRVAGYGEDSPVVPNDTTE 319
Query: 171 GRQNNQRIEIQI 182
R N+R+ + I
Sbjct: 320 HRHMNRRVTVHI 331
>gi|257091690|ref|YP_003165331.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044214|gb|ACV33402.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 198
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 57/198 (28%), Gaps = 18/198 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASR----EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+K L +++ + + C + LD+ +
Sbjct: 1 MKRLAITLALSLMTTACAHRDTYVLLPDGSGQAPGALTIKPAEGGNALKLDQPYQTARST 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHV-------------SFVSEVFLEKKFLPMLQLIATILN 104
+ + + L L I +
Sbjct: 61 MGGGLEAGRTDEQEVRKRYGAAIDASPPPLVRFTLYFLEGSDELTAASKTELVAILAEIK 120
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P I I HTD +G + +N ++ RAD + L+Q+ ++ I G + P+
Sbjct: 121 ARPVPDIVIVGHTDRVGMVADNDRLALRRADSFRKKLLQQ-GIADEAIQTAGRGEREPLV 179
Query: 165 TNDTKVGRQNNQRIEIQI 182
+ N+R+EI +
Sbjct: 180 NTPDETPEPRNRRVEILV 197
>gi|149922653|ref|ZP_01911080.1| flagellar motor protein [Plesiocystis pacifica SIR-1]
gi|149816450|gb|EDM75949.1| flagellar motor protein [Plesiocystis pacifica SIR-1]
Length = 279
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 58/169 (34%), Gaps = 4/169 (2%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
AS E+ + L + + ++F+ + + + + + +
Sbjct: 91 SASVEEMQQALAELQRLRAAAEVRAGMYRSVLNKFKTLIDNGTLKAKIVDGRMVLELRTD 150
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ F + L + + + +L + ++ HTD++ + E A
Sbjct: 151 ILFDSGKAKLSDEGAATVGEVGKLLAELSDRRFQVEGHTDNVPIKTKAFPSNWELASARA 210
Query: 139 SYLIQRG---VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++ IS +A P +N T GR N+RIEI + P
Sbjct: 211 ITVVNEMIAAGMPATNISAAAYADTRPAASNATDEGRAQNRRIEIVLIP 259
>gi|302035624|ref|YP_003795946.1| hypothetical protein NIDE0237 [Candidatus Nitrospira defluvii]
gi|300603688|emb|CBK40019.1| exported protein of unknown function [Candidatus Nitrospira
defluvii]
Length = 513
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 64/176 (36%), Gaps = 12/176 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ V + + A + V R +
Sbjct: 255 ASPVEVTQYENGDSDVPAATVQPVMTARTESAAMMPSEFRSISKPRVERAHGSTRINLDD 314
Query: 79 HV----SFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSI-------GTLKNN 126
EV ++ +P+L+ +A L + + ++ H+D++ G N
Sbjct: 315 LADQLEYDSGEVKVKPAGVPILEQLAEYLRTAAGSQQVRVEGHSDNMEIGPSLKGVFPTN 374
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S+ RA I YLI++G + +S G+ P+ N T+ GR+ N+RIE+ +
Sbjct: 375 WELSKARAAEIVRYLIEKGGMDSAKLSAVGYGASRPVAGNGTEEGRKKNRRIEVVL 430
>gi|146312725|ref|YP_001177799.1| putative outer membrane lipoprotein [Enterobacter sp. 638]
gi|145319601|gb|ABP61748.1| OmpA/MotB domain protein [Enterobacter sp. 638]
Length = 161
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 66/183 (36%), Gaps = 26/183 (14%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M + L + T ++GC + K + + N+ G D+
Sbjct: 1 MFRRYLAPVLLASTILAGCHAPPQGKFTPEQVAAMKSYGFNEMNGDWSLGLSDKI----- 55
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ +E L + +Q +A++L T + HTD+
Sbjct: 56 --------------------LFGKNESQLRAESEQQIQSMASLLAGTGLTHARMDGHTDN 95
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S +RA+V+ + ++ +G KYP+ +N T GR N+R+
Sbjct: 96 YGEESYNQSLSLKRANVVADAWAKGANIPRSNLTTQGLGKKYPVASNSTSQGRAENRRVA 155
Query: 180 IQI 182
+ I
Sbjct: 156 VVI 158
>gi|39937842|ref|NP_950118.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
CGA009]
gi|192293627|ref|YP_001994232.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
gi|39651702|emb|CAE30224.1| OmpA/MotB domain [Rhodopseudomonas palustris CGA009]
gi|192287376|gb|ACF03757.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
Length = 464
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 1/134 (0%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
KA+ + V + + ++K +L + + P+
Sbjct: 331 KADLSVKPAAAPVDASVCQQLFNGLLAKATIQFESASASIDKDSAALLDRLIETAMRCPN 390
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I + HTDS G N +S++RA + Y++ R S + G+ K P+ NDT
Sbjct: 391 AKIEVAGHTDSDGDPAFNQSLSEKRAREVVDYMV-RAGLSPERLQAFGYGSKIPVAGNDT 449
Query: 169 KVGRQNNQRIEIQI 182
G+ N+RI+ +
Sbjct: 450 DAGKAKNRRIDFVV 463
>gi|332880160|ref|ZP_08447842.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332681919|gb|EGJ54834.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 242
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 79/232 (34%), Gaps = 45/232 (19%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ--- 55
+K L L + +S CG K L + + G+ + +
Sbjct: 1 MKGLKFCALVLSAGMLLSSCGGNMNNTGKGSLIGAGGGAALGTLIGTLASSNKGKGAGIG 60
Query: 56 --------------------------MQLQDTGIVVSRIGDMI---TCYIPVHVSFV-SE 85
Q+++ + + + + F S
Sbjct: 61 AAVGVAVGAGVGALIGKKMDKAKAAAQQVENAQVESVTDANGLQAVKVTFDSGILFNTSS 120
Query: 86 VFLEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL--------KNNLLISQERADV 136
L L A+ LN +AI+ +TD+ G + N+ +S +RA+
Sbjct: 121 SALSSNATASLAKFASTVLNVNKDMDVAIKGYTDNQGWKNSTAAQSVQKNMDLSLQRANS 180
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ +YL Q GVS + SV G P+ N T GR+ N+R+E+ ++ +
Sbjct: 181 VSNYLKQCGVSPTQITSVEGLGEADPVADNSTAAGREQNRRVEVYLYASEKM 232
>gi|331006366|ref|ZP_08329676.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC1989]
gi|330419826|gb|EGG94182.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC1989]
Length = 321
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 7/167 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ ++ + + + +++ I VS + + +
Sbjct: 57 SEQQNTTETKQAAESPSASVIELPTLETAFYQQLLPLIEEGAIEVSSNELWLQISLSNRI 116
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
F V ++ ++ IATI+ + I ++ TD++ S + ++
Sbjct: 117 LFDIGNVKPSEQANEVIAQIATIMKDTVN-PIRVEGFTDNLAI-NTAQFPSNWQLSAARA 174
Query: 140 YLIQR----GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I + S +S G+ PI N ++ GR N+R+ + I
Sbjct: 175 SAIVQLLSASGVSPSQLSAVGYGEFQPIADNSSEAGRAKNRRVVLMI 221
>gi|260429336|ref|ZP_05783313.1| OmpA domain protein [Citreicella sp. SE45]
gi|260419959|gb|EEX13212.1| OmpA domain protein [Citreicella sp. SE45]
Length = 304
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 4/159 (2%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDK--AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+ S T G + + A + + I + +
Sbjct: 146 QVIQTSPSTAAEGAPDGETPSETPAPQQTPEAIPGGEIAARLEREGHVI-LRDLSFETGS 204
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L + + L+ +A L PS + + HTD++G+L N +S++RA +SYL R
Sbjct: 205 ASLGETTVSSLEELAAFLTADPSRRVLLVGHTDAVGSLAANTELSRKRAAAAESYLRAR- 263
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +G Y P+ +N T GR+ N+RIE + P
Sbjct: 264 GIPAGQLGAQGAGYLSPVASNLTPEGREENRRIEAILLP 302
>gi|256820526|ref|YP_003141805.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256582109|gb|ACU93244.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 650
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I +++ + L I ++ ++P I I+SHTDS T NL +S
Sbjct: 533 VFEIKEIYFDLNKSNIRPDAAVELAKIVEVMKQYPKMKIDIRSHTDSRATDAYNLALSDR 592
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTND---TKVGRQNNQRIEIQIFP 184
RA +++++G+ R + +G+ + +N T+ Q N+R E +
Sbjct: 593 RAKATLEWIVKQGIDRKR-LKAKGYGETQLVNGCSNGVPCTEEQHQANRRSEFIVVS 648
>gi|198282622|ref|YP_002218943.1| OmpA/MotB domain-containing protein [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218667641|ref|YP_002424813.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247143|gb|ACH82736.1| OmpA/MotB domain protein [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519854|gb|ACK80440.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 217
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I L + +L +A+ K P V+ + + +GT NL +S+ R
Sbjct: 101 ITITGINFKFDSYKLLDHDIRVLDEVASFAKKHPEAVLDVNGYCSKVGTYAYNLKLSKLR 160
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
A + YL GV+S+R + ++G +Y P+ TN T GR NQR+EI
Sbjct: 161 AQSVAQYLAHHGVASDRMV-LKGHSYDNPVATNATPQGRFLNQRVEI 206
>gi|152988440|ref|YP_001349604.1| hypothetical protein PSPA7_4250 [Pseudomonas aeruginosa PA7]
gi|150963598|gb|ABR85623.1| probable outer membrane lipoprotein [Pseudomonas aeruginosa PA7]
Length = 159
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 4/134 (2%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPS 108
E LQ+ G + G + V F + L L IA L
Sbjct: 26 LTAEQIAVLQEQGFELRDEGWE--FGMSSKVLFGNNLDRLNPDSRTTLTKIARALLDVGI 83
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ ++ HTD+ G NL +S+ RA+ + + + I VRG P+ N T
Sbjct: 84 DKVRLEGHTDNYGDEGYNLKLSERRAESVAAVFREA-GMPAANIEVRGLGMSRPVADNKT 142
Query: 169 KVGRQNNQRIEIQI 182
+ GR N+R+ I +
Sbjct: 143 RAGRSENRRVAIIV 156
>gi|167626685|ref|YP_001677185.1| OmpA family peptidoglycan-associated lipoprotein [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|167596686|gb|ABZ86684.1| peptidoglycan-associated lipoprotein, OmpA family [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 209
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 64/202 (31%), Gaps = 28/202 (13%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ +S+ + M ++ C + + K D SS +
Sbjct: 1 MMKKSIVSIAVVSSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSS----QIYGSDN 56
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + +++ + L A L P I + +T
Sbjct: 57 MSSDQVE-QMKKELMDINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNT 115
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT------------ 165
D G+ K N + Q+RA+ + +YL+ + + I V + P
Sbjct: 116 DPRGSEKYNFNLGQKRAEAVYNYLLGK-NVNKDQICVVSYGKLKPAAEPTQFYDEFCTDG 174
Query: 166 -NDTKVGRQ------NNQRIEI 180
NDT + ++R EI
Sbjct: 175 VNDTCSYKASEKAFYLDRRTEI 196
>gi|313681736|ref|YP_004059474.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994]
gi|313154596|gb|ADR33274.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994]
Length = 282
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 11/173 (6%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G A L + T + + K + + + +G + + D + +
Sbjct: 87 AAGSAPVTDGGSLLVGAPPTKSTEAASEA-IQKIQQDLKNASMGSG-PLDQSMDGVLLKL 144
Query: 77 PVHVSFVS-EVFLEKKFLPM-LQLIATILNKFPSTV-IAIQSHTDSIG-----TLKNNLL 128
P + F ++ + L + L+ + I+N P TV I+I+ +TD+ K+N+
Sbjct: 145 PTSIPFKGANATIDNEELHLFLRRVTDIINTLPPTVDISIRGYTDNQPLPPGAGYKDNIE 204
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S RA+ + LI+ GV+ R +S GF P+ N T+ R N+R+E
Sbjct: 205 LSSRRAETVMRELIRNGVAPER-LSTAGFGAAKPVAENTTEENRAKNRRVEFY 256
>gi|254506228|ref|ZP_05118371.1| outer membrane protein [Vibrio parahaemolyticus 16]
gi|219550708|gb|EED27690.1| outer membrane protein [Vibrio parahaemolyticus 16]
Length = 203
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 77/196 (39%), Gaps = 10/196 (5%)
Query: 2 IKELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K L S+ + T S G A E + + N D + + A D
Sbjct: 1 MKTLVHSLILATVFSTGVAYAEDEYEYIATPVPNQIDDLLDEDKDGVINARDLCPQTPAR 60
Query: 61 TGIVVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + G + ++ F+ ++ +A L ++PST + +Q
Sbjct: 61 S--EIDNDGCGTYINTSEKIDLHILFANDSDVVQPIFMTQIRELADFLEEYPSTTVELQG 118
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ +G NL +S+ RA+ +++ L+ + ++R +++ GF D + N
Sbjct: 119 YASKVGRPDYNLELSKRRAEAVENLLLDYQLDADR-VTIVGFGDTNLSVEGDDEQAHAQN 177
Query: 176 QRIEIQIFP-RGNIKK 190
+++ + +G +K+
Sbjct: 178 RKVVASVIGHKGQVKE 193
>gi|115379571|ref|ZP_01466660.1| peptidoglycan-associated lipoprotein [Stigmatella aurantiaca
DW4/3-1]
gi|115363429|gb|EAU62575.1| peptidoglycan-associated lipoprotein [Stigmatella aurantiaca
DW4/3-1]
Length = 134
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 1/125 (0%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + V D + + L + L+ +A L + P + I HT
Sbjct: 1 MAEKPSVPDEDADGASLAFGPIYYELDSTTLRPESRETLERLAEALRRRPGARVTISGHT 60
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+GT + NL + Q RA + K + + ++V + + P + N+R
Sbjct: 61 CELGTTEYNLALGQRRAAMAKD-YLVKLGVGPGNVAVVSYGEESPAVLGSGEEVWSRNRR 119
Query: 178 IEIQI 182
E +
Sbjct: 120 SEFNL 124
>gi|221200257|ref|ZP_03573299.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
gi|221205937|ref|ZP_03578951.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221173949|gb|EEE06382.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221179598|gb|EEE12003.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
Length = 220
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L L + T +++ +TDS+G+ +NL +S+ RA+ +
Sbjct: 115 DALFASGLATLTPAARASLDKLLNAYGDRSYTQVSVTGYTDSVGSDASNLALSKRRAEAV 174
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +Q+ R ++V G PI +N T GR N+R+EI +
Sbjct: 175 AA-YLQQRGLQARSLTVTGRGSADPIASNATAEGRATNRRVEISL 218
>gi|91783726|ref|YP_558932.1| hypothetical protein Bxe_A2088 [Burkholderia xenovorans LB400]
gi|91687680|gb|ABE30880.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 443
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 7/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
++ + ++ + V + + ++ P++ IA + K P
Sbjct: 306 LKELLKNEIAAGTVSVDEDAHHSSVTFRGDSMFPPGAAAVKTSMTPLITKIAGEIAKVPG 365
Query: 109 TVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ + +TD++ S+ERA I L GV + R + G PI
Sbjct: 366 -KVTVLGYTDNVPIKSRQFASNAALSEERATQIMQMLQTAGVPAVR-LEAVGRGDADPIG 423
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T GR N+R+EI +
Sbjct: 424 DNTTVQGRAQNRRVEITV 441
>gi|315223626|ref|ZP_07865480.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287]
gi|314946407|gb|EFS98402.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287]
Length = 652
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 6/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I +++ + L I ++ ++P I I+SHTDS T NL +S
Sbjct: 535 VFEIKEIYFDLNKSNIRPDAAVELAKIVEVMKQYPKMKIDIRSHTDSRATDAYNLALSDR 594
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFP 184
RA I + + + +G+ ++ T+ Q N+R E +
Sbjct: 595 RAKATLE-WIVKQGIDRKRLKAKGYGETQLVNGCSNGVPCTEEQHQANRRSEFIVVS 650
>gi|300718501|ref|YP_003743304.1| OmpA family protein [Erwinia billingiae Eb661]
gi|299064337|emb|CAX61457.1| OmpA family protein [Erwinia billingiae Eb661]
Length = 500
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 7/153 (4%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-----PVHVSFVSEVFLE 89
+ +L K E + + + + G I + L
Sbjct: 72 VAGNAWQNREKALAKIAAEEHIVISSSPLQAQESGGKKDVGIVAQVEDNGMFDTDSAQLS 131
Query: 90 KKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
L ++ +A ++ + V+ I HTD+ G N +S+ RA + ++Q+ +
Sbjct: 132 VDGLRQVRKLAAVMKQDDQQGVVLIVGHTDATGNASWNQKLSESRAQSVGR-VLQQAGLN 190
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + +G PI N T GR N+R+EI
Sbjct: 191 PQRLYFQGAGSSRPIADNATLAGRSANRRVEIV 223
>gi|255020103|ref|ZP_05292174.1| outer membrane protein [Acidithiobacillus caldus ATCC 51756]
gi|254970465|gb|EET27956.1| outer membrane protein [Acidithiobacillus caldus ATCC 51756]
Length = 183
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + + +L +A K P VI + + +GT NL +SQ+R
Sbjct: 66 ITITGINFKFNSSKLLDRDIKVLDEVAEFAQKHPDAVINVNGYASKVGTYAYNLKLSQQR 125
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
A+ + YL Q GV +R + ++G +Y+ PI +N T GR NQR+EI
Sbjct: 126 AESVARYLEQHGVPRDRMV-LKGHSYEDPIASNATPQGRFENQRVEI 171
>gi|238797993|ref|ZP_04641483.1| Type VI secretion system OmpA/MotB family protein [Yersinia
mollaretii ATCC 43969]
gi|238718198|gb|EEQ10024.1| Type VI secretion system OmpA/MotB family protein [Yersinia
mollaretii ATCC 43969]
Length = 446
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 53/134 (39%), Gaps = 7/134 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ ++ + V F + + + +++ +A +++ +
Sbjct: 313 LKDEIAKKLVSVDETTSRSKVIFRGDTMFQVGSDKVRPEIVNVIERVAQEVHRVKGA-VL 371
Query: 113 IQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I HTDS+ NN ++S++RA + ++ ++ I G P+ ND
Sbjct: 372 IVGHTDSMPINKPGYPNNQVLSEKRAANVARFM-EKAGIPTGKIRFEGKGDTQPVSRNDD 430
Query: 169 KVGRQNNQRIEIQI 182
GR N+R+EI +
Sbjct: 431 AAGRSQNRRVEIFV 444
>gi|237653594|ref|YP_002889908.1| flagellar motor protein MotD [Thauera sp. MZ1T]
gi|237624841|gb|ACR01531.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
Length = 279
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 7/184 (3%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
+ + ++ + + V +R + D+ + V+
Sbjct: 69 IVLPKVSVVPSQAITRPAPPAVDPVVEQRRQQAAQRMRNVADEIRRVLSPLTGSGQVKVT 128
Query: 67 RIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
++ I + F E L + LQ +A +L I ++ HTD++
Sbjct: 129 EGAFGVSVEINASLLFAPGEAALGSNAVSALQAVARVLAP-AEFPITVEGHTDNVPISTF 187
Query: 126 ----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N +S RA + I + ++ G+A + P+ N + GR N+R+ I
Sbjct: 188 RFPSNWELSAVRASTVARLFIDN-GVTPARLTAAGYADQRPVADNADEEGRGRNRRVTIL 246
Query: 182 IFPR 185
I R
Sbjct: 247 IESR 250
>gi|24374850|ref|NP_718893.1| OmpA family protein [Shewanella oneidensis MR-1]
gi|24349542|gb|AAN56337.1|AE015771_7 OmpA family protein [Shewanella oneidensis MR-1]
Length = 196
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 62/182 (34%), Gaps = 4/182 (2%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSN---DTDIVNKRFGSSLDKAEDEFQM-QLQD 60
L++ + + ++ V K + +D+ E Q
Sbjct: 12 TCLALSLSLMLPAYAWQDTDQDGVPDIKDACPNTPANTSVMANGCVDEVEVTSDNIQCNL 71
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
D + + ++ L L+ + L T + + HTD +
Sbjct: 72 NDPSTYSASDCHHIETAIVYFEFAIAEVDLSQWKALALVKSFLEANTETKLTLVGHTDIV 131
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N +S +RA +K L++ + +V G P+ N + GR N+R++
Sbjct: 132 GTPEFNYQLSLQRAQNVKRILVEDYGFNPNRFTVVGKGISEPVADNRSSEGRGLNRRVQF 191
Query: 181 QI 182
+
Sbjct: 192 IV 193
>gi|167848193|ref|ZP_02473701.1| hypothetical protein BpseB_23171 [Burkholderia pseudomallei B7210]
Length = 382
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 8/183 (4%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIV 64
+ I + GC + + + + + + + ++ +
Sbjct: 200 AVLSLIALGLFGCFKYALSTRSADVQQRIAAIARMAPPAAPAELRLATLLAGEIAAGTLS 259
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + F + P+++ IA + K P + ++ +TD+
Sbjct: 260 VEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPG-KVTVRGYTDNQPIK 318
Query: 124 KNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
S+ERA + L GV ++R + G PI N T GR N+R+E
Sbjct: 319 SRQFASNEALSEERATQVMQMLQSAGVPASR-LEALGKGGAEPIGDNRTPQGRALNRRVE 377
Query: 180 IQI 182
I +
Sbjct: 378 ITV 380
>gi|114776497|ref|ZP_01451542.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Mariprofundus ferrooxydans PV-1]
gi|114553327|gb|EAU55725.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Mariprofundus ferrooxydans PV-1]
Length = 499
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 64/158 (40%), Gaps = 2/158 (1%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV-SRIGDMITCYIPVHVSFVS 84
++ + + + K + + + + + + + I +
Sbjct: 337 QQSQMSNIKEAFQAKLERETYEQKRQQRLRALFKPNQVELLANLDGSILMRLSALKFASG 396
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ K+ ML + + I I+ HTD+ G +K N +S +RA+ ++ +LI
Sbjct: 397 SSKINAKYYDMLGQVKEAFAIYADRKIRIEGHTDNKGDVKVNQRLSLKRAEAVRDFLIAA 456
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G +R + G+ PI +N+ GR N+RI++ I
Sbjct: 457 GADGSR-LKALGYGEVRPIASNEFDRGRAMNRRIDVVI 493
>gi|321312511|ref|YP_004204798.1| flagellar motor protein MotS [Bacillus subtilis BSn5]
gi|320018785|gb|ADV93771.1| flagellar motor protein MotS [Bacillus subtilis BSn5]
Length = 242
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 69/204 (33%), Gaps = 27/204 (13%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK----------AEDEF 54
+ L + + +K K + + +S++K ED+
Sbjct: 32 ITLILVFFILLFSMSQIDLQKFKAAVDSIQKEGNGLQPDQTSIEKKNTSPSDTKKQEDQQ 91
Query: 55 QMQLQD-----------TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
L+ + R + + V F E + K +L IA +
Sbjct: 92 DQLLKKVNTYIKDNHLKAQMTAKRDERGVVLVLQEAVLFDTGEAKVLKNAETLLHQIAVL 151
Query: 103 LNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
L P+ I ++ HTDS +N +S RA + Y + ++ G+A
Sbjct: 152 LQTIPN-DIQVEGHTDSRNISTYRYPSNWELSAARASGVIQYFTSKEKLPSKRFIAVGYA 210
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ N T + N+R+EI I
Sbjct: 211 DTKPVKDNKTNEHMKENRRVEIVI 234
>gi|254474524|ref|ZP_05087910.1| OmpA family protein [Ruegeria sp. R11]
gi|214028767|gb|EEB69602.1| OmpA family protein [Ruegeria sp. R11]
Length = 185
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 61/184 (33%), Gaps = 11/184 (5%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSN-DTDIVNKRFGSS----LDKAEDEFQMQ 57
K + I T+ G+AS + I G D AE
Sbjct: 5 KRVIGGAAIAATMCAGGVASAQDGGFGGPGQRYVPTIWVDPDGCEHWVMDDGAEGFMTPH 64
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ G V R G++ ++ + LQ ++ I HT
Sbjct: 65 VTRDGKPVCRRGNICGVMPSDQFFATNKHRISAAGQKRLQE---FFQSANASAFIITGHT 121
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
DS + + N+ +SQ RA+ + R + RG+ + P ND+ N+R
Sbjct: 122 DSRASDEYNMRLSQRRANAVAEVGES---VGARILEARGYGERDPRVPNDSASNMAQNRR 178
Query: 178 IEIQ 181
+EI
Sbjct: 179 VEII 182
>gi|163783062|ref|ZP_02178057.1| hypothetical protein HG1285_00765 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881742|gb|EDP75251.1| hypothetical protein HG1285_00765 [Hydrogenivirga sp. 128-5-R1-1]
Length = 351
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + ++++P+L + L + + I+ TD IG + N ++ +RA+ +K Y
Sbjct: 245 FDFDKYSIRREYVPILNEVVKTLKENEFVKVRIEGFTDIIGPKEYNEKLAMKRAEAVKRY 304
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L+++ I + GF + I +N+ K+GR N+R+E +
Sbjct: 305 LVEK-GIPEDKIDIVGFGKERFIASNEDKIGRLTNRRVEFIVI 346
>gi|71909661|ref|YP_287248.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71849282|gb|AAZ48778.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 180
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 53/164 (32%), Gaps = 10/164 (6%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + +S L +G+
Sbjct: 17 CSTTPLPEDGGAPVESRSGSGSG---------VAPVTAGGLDASGLPRELTDPKSKLSQR 67
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + ++ ++ ++ A L + +Q +TD G+ + NL + Q+RA+ +
Sbjct: 68 SIYFDLDKYEVKDEYKDLVAAHAKYLVANKGFKVLLQGNTDERGSREYNLSLGQKRAEAV 127
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
K L GV ++ SV + P D + N+R +I
Sbjct: 128 KRSLTLLGVKDDQIESVS-LGEEKPKDAGHDEAAWSQNRRADIL 170
>gi|22127533|ref|NP_670956.1| hypothetical protein y3659 [Yersinia pestis KIM 10]
gi|45443397|ref|NP_994936.1| hypothetical protein YP_3665 [Yersinia pestis biovar Microtus str.
91001]
gi|21960635|gb|AAM87207.1|AE013969_3 hypothetical [Yersinia pestis KIM 10]
gi|45438266|gb|AAS63813.1| conserved hypothetical protein [Yersinia pestis biovar Microtus
str. 91001]
Length = 545
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 11/147 (7%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVFLEKKF--LPMLQLIAT 101
+ ++ + L + + V + + + E L ++F ++ +
Sbjct: 370 NIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSDGAFRTGEATLSEEFINKKNIERLGL 429
Query: 102 ILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVS---SNRFISV 154
L +P I + HTD+ NNL +S RA V+ L + R IS
Sbjct: 430 ALAPWPG-DIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINETHQREISA 488
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G P+ N T+ GR+ N+R++I
Sbjct: 489 IGRGESDPLADNATEEGRKRNRRVDIL 515
>gi|225382176|gb|ACN89316.1| hypothetical protein VEPGS_0610 [Vibrio alginolyticus]
Length = 430
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 7/155 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKF 92
N + +K ++ I V + D + + + +
Sbjct: 275 NQDATSESKSAPIAEKISMYLATEIGKGLINVEPLQDRVRISLKSQDLFESGSADVVAYI 334
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSS 148
P++ +A L I + HTD +N +S RA + LI
Sbjct: 335 QPVISKLARTLESTQG-KIIVTGHTDDRPIFTSKYPSNWHLSLARATAMSEQLISNSALE 393
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R I G P+ N + R N+RIEI +
Sbjct: 394 GRVI-PEGLGDARPLVENSSDENRAINRRIEIDLL 427
>gi|156976121|ref|YP_001447027.1| hypothetical protein VIBHAR_04892 [Vibrio harveyi ATCC BAA-1116]
gi|156527715|gb|ABU72800.1| hypothetical protein VIBHAR_04892 [Vibrio harveyi ATCC BAA-1116]
Length = 321
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ ++N +P + I ++D+ G+ N ++++RA + +
Sbjct: 211 FGLESAELQDSS--AFNGTVELMNTYPQAQVEINGYSDTTGSEAYNQQLTEKRAQAVAEH 268
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G++++R +V+G P+ +N+T+ GR+ N+R+E+ +
Sbjct: 269 FQAEGIAADRM-TVKGMGEANPVASNETREGREENRRVEVVV 309
>gi|332306543|ref|YP_004434394.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173872|gb|AEE23126.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 366
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 63/167 (37%), Gaps = 14/167 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC L + + K + + D A ++ G +
Sbjct: 205 GCALKATDSDKDGVIDAKD------------QCANTPMNDKVDANGCSIFTEESKTMSL- 251
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + L+ +Q + ++ ST I+ + + GT + N+ +S ERA+
Sbjct: 252 -KILFDNNSSKLKNIDSASVQEFVDFMRRYGSTDAVIEGYASAPGTEQYNMKLSVERAEA 310
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++ YL+++ + + G+ +D +T+ Q N+RIE +
Sbjct: 311 VRQYLVEQYNIDSARLEAVGYGETKLLDKANTREAHQKNRRIEAYVT 357
>gi|86141296|ref|ZP_01059842.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
gi|85831855|gb|EAQ50310.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
Length = 640
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
GD+ I + L+ + +++ +P +I I+SHTD GT N
Sbjct: 517 DGDIEKIRIDPIYFEYYRYNITDVAAIQLRRVIEVMDAYPEMIIKIESHTDQRGTDYFNK 576
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND------TKVGRQNNQRIEIQ 181
+S RA+ K +LI+ G+ +R S G+ PI+ D T++ N+R E
Sbjct: 577 TLSTNRANSTKDWLIENGIDPSRIQSAIGYGESQPINICDEEGKTCTELEYSENRRSEFI 636
Query: 182 IFPR 185
+ R
Sbjct: 637 VVSR 640
>gi|170700356|ref|ZP_02891367.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170134743|gb|EDT03060.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 228
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 6/134 (4%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ I + R I I + F + L P+L IA L++ + I
Sbjct: 94 LDALKTNGRISLVRASHGIEIGIDAKILFSVGDARLLPDATPVLSQIARALSEHATGDIL 153
Query: 113 IQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++ HTDS+ ++N +S RA + YL R + ++ G A P+ D
Sbjct: 154 VEGHTDSVPIANAKYESNWELSSARAGSVVRYLADR-GVAPHRLAAIGRADTQPLVAGDD 212
Query: 169 KVGRQNNQRIEIQI 182
R N+R+ I +
Sbjct: 213 APARARNRRVTIFV 226
>gi|119953079|ref|YP_945288.1| flagellar motor protein MotB [Borrelia turicatae 91E135]
gi|119861850|gb|AAX17618.1| chemotaxis MotB protein [Borrelia turicatae 91E135]
Length = 262
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 14/168 (8%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE-KKF 92
T+ + +S +K+ EF ++Q ++V + + F S ++
Sbjct: 87 STEKNKQASQASKNKSIIEFIEKIQSNRVIVRHYERGVVVSLLADAFFDSASAEVKLDDN 146
Query: 93 LPMLQLIATIL--NKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRG 145
+Q IA+ + I+ HTD+ G K+N +S RA + ++
Sbjct: 147 RETIQKIASFIGFLDNQGYNFKIEGHTDNVDVNINGIWKSNWELSSARAVNMLEQILNYT 206
Query: 146 VSSNRF-----ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
S V GFA P+ T+DT GR N+RI+I I ++
Sbjct: 207 DQSKIQSIESKFEVSGFAGSRPVATDDTPEGRAYNRRIDILITSDASL 254
>gi|114570660|ref|YP_757340.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
gi|114341122|gb|ABI66402.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
Length = 304
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 45/108 (41%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + L L + +L + PS + + HTD G+L N+ +S+ R
Sbjct: 195 VRVDGLLFAHDSDVLLPDSATALTALRDLLTERPSLTLYVVGHTDMSGSLTYNMSLSERR 254
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
A + + L++ ++ G P +N T GR N+R+EI
Sbjct: 255 AASVVTALVEDYGIRMDRLTAAGVGPLAPEASNGTDDGRTLNRRVEIV 302
>gi|183219680|ref|YP_001837676.1| hypothetical protein LEPBI_I0255 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909816|ref|YP_001961371.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167774492|gb|ABZ92793.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167778102|gb|ABZ96400.1| Hypothetical protein LEPBI_I0255 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 348
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 71/189 (37%), Gaps = 14/189 (7%)
Query: 3 KELGLSMFIMTTIS-------GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
K + + + ++ + C ++ +S+ N R ++
Sbjct: 163 KYILIGLIVLFFLVLIFFGVRSCNRNTQSNISNQGSESSQGQETNSRSLERVNLQTGNVS 222
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
Q + I D+ +I ++ + +A L +PS + ++
Sbjct: 223 SQFDSQSKAIRYINDLQIRFIKQSMATEDGAA------DKIATLAEALKTYPSIKVRVKG 276
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HT IG + N ++S ERA I LI + + + RGF IDTN T+ GR N
Sbjct: 277 HTCFIGEMDENKILSDERAKFIYDELI-KNGVNQSQLDYRGFGETAEIDTNQTESGRIKN 335
Query: 176 QRIEIQIFP 184
+R++ +
Sbjct: 336 RRVDFTVLS 344
>gi|93005426|ref|YP_579863.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
gi|92393104|gb|ABE74379.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
Length = 218
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 67/189 (35%), Gaps = 12/189 (6%)
Query: 2 IKELG----LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+K + +++ +S C A + + +V+ E +
Sbjct: 1 MKAILYLVSITLCSSLALSACQTAPKLAIDNIVTAPMPILMVSLDSDGDGYSDEIDLCPG 60
Query: 58 LQDTGIVVSR----IGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ R G I + F L K++ L +A L ++ + +
Sbjct: 61 TPRNIVTDERGCPFTGMGIGLKMEYRAFFAKGSSELSKEYQLELDTVALKLQEYYTATMR 120
Query: 113 IQSHTDSIGTLKNNLLISQ---ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I+ H L + RA ++K+YL+ + ++ + + PI ++DT+
Sbjct: 121 IEGHASVDEMSDTKLRPNSLARNRALIVKNYLVLKHKIDPERLNTFNYDAEQPITSSDTE 180
Query: 170 VGRQNNQRI 178
G+ N+R+
Sbjct: 181 EGKSMNRRV 189
>gi|308047841|ref|YP_003911407.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307630031|gb|ADN74333.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 716
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 56/165 (33%), Gaps = 11/165 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ S + + +V + L L G + VH
Sbjct: 1 MTSTPRWPRLSLLAASLMLVAGAQAAPLAGQWQADTDAL--------ISGQRQQITLNVH 52
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L + L +A L +AI HTDS G + NL +SQ RA +
Sbjct: 53 -FDTDSATLSQADQQALTQLAAKLAPMLDGQMALAISGHTDSAGAEEYNLGLSQRRAQSV 111
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+L + I R F P+ +ND+ G N+R+EI +
Sbjct: 112 AQFLTSLMPEQHIRIESRYFGETQPLQSNDSARGMAANRRVEITL 156
>gi|114765730|ref|ZP_01444828.1| peptidoglycan-associated lipoprotein [Pelagibaca bermudensis
HTCC2601]
gi|114541947|gb|EAU44982.1| peptidoglycan-associated lipoprotein [Roseovarius sp. HTCC2601]
Length = 174
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 55/183 (30%), Gaps = 20/183 (10%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF--GSSLDKAEDEFQMQLQDTGI 63
L + ++ C R N GS+ D + Q +
Sbjct: 7 ALMIAAALGLAACTSGDRFGAGSGADGYGAGAGANAGIVPGSANDPQSPAYFNQTIGDRV 66
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ V + L + L A L + I+ H D GT
Sbjct: 67 ----------------LFLVDQSSLTPEAQATLDAQAGWLMTNSDYLAVIEGHADEQGTR 110
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N+ + RA+ YLI + + + + + + P++ + N+R + +
Sbjct: 111 EYNIALGARRANATMEYLISK-GVAPNRLKIISYGKERPVEICSEESCYAKNRRA-VTVI 168
Query: 184 PRG 186
G
Sbjct: 169 SMG 171
>gi|325102858|ref|YP_004272512.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324971706|gb|ADY50690.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 141
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + + L + IL P+ I + SHTDS G NL +SQ+R
Sbjct: 26 IRIENIYYDFDKWNIRPDAAVELDKLVKILKDNPTIWIELGSHTDSRGKDAYNLNLSQKR 85
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTND---TKVGRQNNQRIEIQIF 183
A+ Y++ R I+ RG+ + +N T+ Q N+R E +I
Sbjct: 86 AESAVGYIVSR-GIDKNRIAARGYGETQLLNRCSNGVECTEEEHQLNRRTEFKIV 139
>gi|163786795|ref|ZP_02181243.1| hypothetical protein FBALC1_16457 [Flavobacteriales bacterium
ALC-1]
gi|159878655|gb|EDP72711.1| hypothetical protein FBALC1_16457 [Flavobacteriales bacterium
ALC-1]
Length = 637
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 6/139 (4%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E+E +Q+ I + D I + + + + L + I+NK+P V
Sbjct: 498 EEENNVQISLDPIEKLIVADKI--ELAPIYFEYDKSNVTAQAAFELDKLVQIMNKYPDLV 555
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND--- 167
I SHTD IG+ N+ +S RA Y+I +G+ +R IS G P
Sbjct: 556 INATSHTDYIGSAPYNMRLSDRRAKTTVQYVISKGIDESR-ISGVGKGETEPKIDCGTKC 614
Query: 168 TKVGRQNNQRIEIQIFPRG 186
T RQ N+R E I G
Sbjct: 615 TDEERQMNRRSEFIIVSGG 633
>gi|16080024|ref|NP_390850.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis
str. 168]
gi|221310916|ref|ZP_03592763.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis
str. 168]
gi|221315243|ref|ZP_03597048.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221320160|ref|ZP_03601454.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221324441|ref|ZP_03605735.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis
str. SMY]
gi|732300|sp|P39064|YTXE_BACSU RecName: Full=Uncharacterized protein YtxE
gi|348049|gb|AAA68283.1| putative [Bacillus subtilis]
gi|2293223|gb|AAC00301.1| YtxE [Bacillus subtilis]
gi|2635456|emb|CAB14950.1| putative flagellar motor apparatus component [Bacillus subtilis
subsp. subtilis str. 168]
gi|291485404|dbj|BAI86479.1| flagellar motor protein MotS [Bacillus subtilis subsp. natto
BEST195]
Length = 242
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 69/204 (33%), Gaps = 27/204 (13%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK----------AEDEF 54
+ L + + +K K + + +S++K ED+
Sbjct: 32 ITLILVFFILLFSMSQIDLQKFKAAVDSIQKEGNGLQPDQTSIEKKNTSPSDTKKQEDQQ 91
Query: 55 QMQLQD-----------TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
L+ + R + + V F E + K +L IA +
Sbjct: 92 DQLLKKVNTYIKDNHLKAQMTAKRDERGVVLVLQEAVLFDTGEAKVLKNAETLLHQIAVL 151
Query: 103 LNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
L P+ I ++ HTDS +N +S RA + Y + ++ G+A
Sbjct: 152 LQTIPN-DIQVEGHTDSRNISTYRYPSNWELSAARASGVIQYFTSKEKLPSKRFIAVGYA 210
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ N T + N+R+EI I
Sbjct: 211 DTKPVKDNKTNEHMKENRRVEIVI 234
>gi|295133926|ref|YP_003584602.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda
SM-A87]
gi|294981941|gb|ADF52406.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda
SM-A87]
Length = 281
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 69/183 (37%), Gaps = 12/183 (6%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVN------KRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
++ ++++ + + K + +++ + ++E + ++
Sbjct: 85 VTAMSNKTKDRMRKTIAKMDASELEGVETLEDSINAAISYNLKNEITEGKDGDDVDITVD 144
Query: 69 GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI-----GT 122
++ + + F L P+L+ +A ++N PS + ++ HTD+
Sbjct: 145 KTVVMINVSDKLLFRSGSYRLSNDAQPLLKKLAEVINSEPSMEVMVEGHTDNRTMVEDSW 204
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L++N +S RA + L + + G + P+ N +K N+R I +
Sbjct: 205 LEDNWDLSVRRATAVVRQLQDKYDVDGAKLIAAGRSSYSPLVENTSKDNMAKNRRTRIVV 264
Query: 183 FPR 185
P
Sbjct: 265 IPN 267
>gi|218886185|ref|YP_002435506.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218757139|gb|ACL08038.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 241
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 7/133 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ +S + + V F L + +L + IL ++ + +
Sbjct: 96 MADAIPQNASGISADDVGVLLRVNSDVMFKAGSAELVPEGSRVLDEVIKILREY-NLYLM 154
Query: 113 IQSHTDSIGTLKNNLLISQE-----RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
++ H+DS + S RA Y+I+ G + +A P++ N
Sbjct: 155 VRGHSDSGEVAAGSPYPSNWELSGARAAAAVRYIIEHGGIKPTRLRGIAYADTRPMEPNT 214
Query: 168 TKVGRQNNQRIEI 180
T R N+R+E
Sbjct: 215 TPESRSKNRRVEF 227
>gi|253698930|ref|YP_003020119.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251773780|gb|ACT16361.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 204
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 55/196 (28%), Gaps = 16/196 (8%)
Query: 2 IKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSS-------------- 46
+K L + I GC K + S T +
Sbjct: 8 MKLLVPVLCAGMFIYGGCAKQQTVKVDQPVAPSATTAATTATTPPAAKTAAAPAEAASAP 67
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
L A + + T + L L L
Sbjct: 68 LSAANISSDSIPPQSPQATAGTDASQTAALETIYFDFDSSLLNDAARATLVANLEKLKAN 127
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
P + I+ H+D G+ NL +S+ RA K YL +SV G+ + P
Sbjct: 128 PKASLRIEGHSDERGSDDYNLALSERRAQSAKKYLQAL-GFPAEKLSVLGYGEERPAVKG 186
Query: 167 DTKVGRQNNQRIEIQI 182
+++ N+R E I
Sbjct: 187 ESEEFWAKNRRDEFVI 202
>gi|218778866|ref|YP_002430184.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218760250|gb|ACL02716.1| OmpA/MotB domain-containing protein [Desulfatibacillum alkenivorans
AK-01]
Length = 281
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 50/157 (31%), Gaps = 27/157 (17%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + G+ I + F ++ L +A I+N + + I HT
Sbjct: 102 SSNQVDIRSTGNGSLISIRDQLLFEDGASSIKPSAKAFLTRLAEIINAD-NFPVVITGHT 160
Query: 118 DSIGTLKN----NLLISQERADVIKSYLIQRG---------------------VSSNRFI 152
D + N +S RA + + + + I
Sbjct: 161 DDRPPEEKGVQSNWELSARRAMAVYRFFYDQYLEQLAAREREANGGVAPVNLPNKYPKRI 220
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
V G P+ +NDT R N R+EI + R N K
Sbjct: 221 DVYGCGPSQPVASNDTPQTRALNNRVEILMDKRANYK 257
>gi|182418680|ref|ZP_02949956.1| chemotaxis protein MotB [Clostridium butyricum 5521]
gi|237669705|ref|ZP_04529682.1| chemotaxis protein MotB [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377457|gb|EDT75012.1| chemotaxis protein MotB [Clostridium butyricum 5521]
gi|237654779|gb|EEP52342.1| putative chemotaxis MotB protein [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 248
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 73/214 (34%), Gaps = 37/214 (17%)
Query: 5 LGLSMFIMTTISGCGLASREKKKV--------------------------FLHKSNDTDI 38
L L + + + G + K +
Sbjct: 24 LTLLLALFIVMFAMGQTDKAKFQAMSKSFNQIFSGGTSMMQSDGNSIIPMDTISDGTGKS 83
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDMITCYIPVH-VSFVSEVFLEKKFL 93
+ + + + ++ G I V + + + + + + + +
Sbjct: 84 DAELEQDKMVAIKAVMEEEITSEGYSDAINVDINEEGLYITVQDVALFDSGKADIHQNVI 143
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQ-RGVSS 148
P+L ++ +LN + I I HTD++ +N+ +S ERA ++S L+
Sbjct: 144 PLLSKVSAMLNGLEN-EIKIVGHTDNVPIDNSEFHSNMDLSAERAINVRSLLVNSENGLD 202
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S+ + P +NDT+ GR N+R+EI +
Sbjct: 203 PEKTSIEAWGELKPKASNDTEQGRAQNRRVEIVV 236
>gi|221209294|ref|ZP_03582275.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
gi|221169982|gb|EEE02448.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
Length = 220
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L L + T +++ +TDS+G+ +NL +S+ RA+ +
Sbjct: 115 DALFASGLATLTPAARASLDKLLNAYGDRSYTQVSVTGYTDSVGSDASNLALSKRRAEAV 174
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +Q+ + R ++V G PI TN T GR N+R+EI +
Sbjct: 175 AA-YLQQRGLNARTLTVTGRGSADPIATNATAEGRATNRRVEISL 218
>gi|258404712|ref|YP_003197454.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM
5692]
gi|257796939|gb|ACV67876.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692]
Length = 248
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 63/153 (41%), Gaps = 5/153 (3%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKF 92
+ +N+ ++ + I + + + + + F E L+ +
Sbjct: 75 AQQNNLNESLQRVYQNIKNRIDNLEVNENIKLVKDRGAVVLRLNDSLLFDSGETALKPRA 134
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSN 149
P+L+ +A ++ + ++ HTD++ + N IS ERA + +L R +
Sbjct: 135 APLLREVAQLVRPL-HLDMRVEGHTDNVPVSRPGISNWDISIERAVSVVKFLTSRDLLPP 193
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S G+ + P+ ND+ R N+R++ +
Sbjct: 194 SRLSAAGYGDQRPLVRNDSPENRAKNRRVDFYL 226
>gi|254477082|ref|ZP_05090468.1| OmpA/MotB [Ruegeria sp. R11]
gi|214031325|gb|EEB72160.1| OmpA/MotB [Ruegeria sp. R11]
Length = 331
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 61/131 (46%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
Q L +++R+ + V L K L +++ L I +
Sbjct: 201 QPALIGEADLITRLTQSGHAVLGDLEFETGAVELGAKPYDSLVALSSFLQDNTEFDILLV 260
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD++G+L N+ IS+ RAD ++ L++ I+V G Y P+ +N T GR+
Sbjct: 261 GHTDTVGSLDQNIAISERRADAVRRRLLEDSTVDRARIAVAGAGYMAPLTSNQTPAGREA 320
Query: 175 NQRIEIQIFPR 185
N+R+E+ + PR
Sbjct: 321 NRRVEVVLIPR 331
>gi|260890076|ref|ZP_05901339.1| hypothetical protein GCWU000323_01238 [Leptotrichia hofstadii
F0254]
gi|260860099|gb|EEX74599.1| OmpA family protein [Leptotrichia hofstadii F0254]
Length = 155
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++ ++ +L+ + + + + + I HTDS GT N+ + RA+ +K+
Sbjct: 52 FDFDKSVVKPQYFELLRNVKDYVEQN-NLNLRIIGHTDSKGTDAYNMALGMRRANAVKAK 110
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L++ G+ R I V PI NDT+ GR N+RI+ +
Sbjct: 111 LLEFGLDPARIIGVESMGESDPIAPNDTEQGRFENRRIQFK 151
>gi|110678301|ref|YP_681308.1| OmpA family domain-containing protein [Roseobacter denitrificans
OCh 114]
gi|109454417|gb|ABG30622.1| OmpA family domain protein [Roseobacter denitrificans OCh 114]
Length = 319
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 5/175 (2%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
+ +S +S + + + + IV K E E ++QD V +
Sbjct: 148 AVGVLVSTTASSSYVQVVLVDEDMDVSAIVPKER-----PIERETMPKVQDAEQGVQLLR 202
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+P V L L+ ++ L + +A+ HTD+ GTL N+ +
Sbjct: 203 RDGRYVLPGLEFSVGTSDLGPGPFSALKELSDFLTRSQDMRVALVGHTDATGTLAANISL 262
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S+ RA ++S LI+ S + G Y PI +N T+ GR+ N+R+E+ +
Sbjct: 263 SRARARSVRSRLIETYGVSPDQVDAEGMGYLAPIASNLTEEGRRLNRRVEVVLLN 317
>gi|194435106|ref|ZP_03067342.1| OmpA family protein [Shigella dysenteriae 1012]
gi|194416637|gb|EDX32770.1| OmpA family protein [Shigella dysenteriae 1012]
gi|332089196|gb|EGI94303.1| ompA family protein [Shigella dysenteriae 155-74]
Length = 127
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + ++ L + +Q +A L T + HTD+ G
Sbjct: 8 ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSY 67
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA+V+ G ++ +G KYPI +N T GR N+R+ + I
Sbjct: 68 NEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTVQGRAENRRVAVVIT 125
>gi|269967472|ref|ZP_06181529.1| hypothetical protein VMC_29590 [Vibrio alginolyticus 40B]
gi|269827913|gb|EEZ82190.1| hypothetical protein VMC_29590 [Vibrio alginolyticus 40B]
Length = 430
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 7/155 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKF 92
N + +K ++ I V + D + + + +
Sbjct: 275 NQDATSESKSAPIAEKISMYLATEIGKGLINVEPLQDRVRISLKSQDLFESGSADVVAYI 334
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSS 148
P++ +A L I + HTD +N +S RA + LI
Sbjct: 335 QPVISKLARTLESTQG-KIIVTGHTDDRPIFTSKYPSNWHLSLARATAMSEQLISNSALE 393
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R I G P+ N + R N+RIEI +
Sbjct: 394 GRVI-PEGLGDARPLVENSSDENRAINRRIEIDLL 427
>gi|237509611|ref|ZP_04522326.1| type VI secretion system OmpA/MotB family protein [Burkholderia
pseudomallei MSHR346]
gi|235001816|gb|EEP51240.1| type VI secretion system OmpA/MotB family protein [Burkholderia
pseudomallei MSHR346]
Length = 421
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 8/183 (4%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIV 64
+ I + GC + + + + + + + ++ +
Sbjct: 239 AVLSLIALGLFGCFKYALSTRSADVQQRIAAIARMAPPAAPAELRLATLLAGEIAAGTLS 298
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + F + P+++ IA + + P + ++ +TD+
Sbjct: 299 VEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPG-KVTVRGYTDNQPIK 357
Query: 124 KNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
S+ERA + L GV ++R + G PI N T GR N+R+E
Sbjct: 358 SRQFASNEALSEERATQVMQMLQSAGVPASR-LEALGKGGAEPIGDNRTPQGRALNRRVE 416
Query: 180 IQI 182
I +
Sbjct: 417 ITV 419
>gi|254182815|ref|ZP_04889408.1| OmpA domain protein [Burkholderia pseudomallei 1655]
gi|184213349|gb|EDU10392.1| OmpA domain protein [Burkholderia pseudomallei 1655]
Length = 421
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 8/183 (4%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIV 64
+ I + GC + + + + + + + ++ +
Sbjct: 239 AVLSLIALGLFGCFKYALSTRSADVQQRIAAIARMAPPAAPAELRLATLLAGEIAAGTLS 298
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + F + P+++ IA + K P + ++ +TD+
Sbjct: 299 VEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPG-KVTVRGYTDNQPIK 357
Query: 124 KNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
S+ERA + L GV ++R + G PI N T GR N+R+E
Sbjct: 358 SRQFASNEALSEERATQVMQMLQSAGVPASR-LEALGKGGAAPIGDNRTPQGRALNRRVE 416
Query: 180 IQI 182
I +
Sbjct: 417 ITV 419
>gi|325475131|gb|EGC78317.1| OmpA family protein [Treponema denticola F0402]
Length = 391
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF-PSTV 110
+ + ++ GI +S +++ + + + + + +IA L K P T
Sbjct: 258 ELLLEKHKEKGIELSNPKNIVKIIMYDIRFVADMPDVLPEEMGKIDVIAEALLKLGPYTK 317
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I+ HT + ++ ++S +RA+ I + +RG+ +R ++ G+ P+ ++ +
Sbjct: 318 FLIEGHTADLNRPEDEKILSVQRAERIADEISKRGIDRSRIMTA-GYGSTRPVAPSNNET 376
Query: 171 GRQNNQRIEIQIF 183
N+R+EI +
Sbjct: 377 NMAKNRRVEITVI 389
>gi|254189549|ref|ZP_04896059.1| OmpA domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|157937227|gb|EDO92897.1| OmpA domain protein [Burkholderia pseudomallei Pasteur 52237]
Length = 421
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 8/183 (4%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIV 64
+ I + GC + + + + + + + ++ +
Sbjct: 239 AVLSLIALGLFGCFKYALSTRSADVQQRIAAIARMAPPAAPAELRLATLLAGEIAAGTLS 298
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + F + P+++ IA + + P + ++ +TD+
Sbjct: 299 VEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPG-KVTVRGYTDNQPIK 357
Query: 124 KNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
S+ERA + L GV ++R + G PI N T GR N+R+E
Sbjct: 358 SRQFASNEALSEERATQVMQMLQSAGVPASR-LEALGKGGAEPIGDNRTPQGRALNRRVE 416
Query: 180 IQI 182
I +
Sbjct: 417 ITV 419
>gi|254468321|ref|ZP_05081727.1| OmpA/MotB [beta proteobacterium KB13]
gi|207087131|gb|EDZ64414.1| OmpA/MotB [beta proteobacterium KB13]
Length = 165
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/182 (13%), Positives = 62/182 (34%), Gaps = 25/182 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHK-SNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K+L + + ++GC E + + + LDK +
Sbjct: 1 MKKLVFAGLTLALLAGCSSTPLEDAEAPSDAKAGVAADQTQTDDLGLDKLRSDS------ 54
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ ++L ++ A P+ + ++ H D
Sbjct: 55 ------------LLTQRSIYFDFDKFEVKPEYLDIVNAHAQYAADHPAAKMTLKGHADYR 102
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR--QNNQRI 178
G+ + NL + Q+R+ +K ++ +S+ I + + N G ++R+
Sbjct: 103 GSHEYNLALGQKRSVSVKD-VMNTSGASDGQIETVSYGEEE---ANQNCQGNECSQDRRV 158
Query: 179 EI 180
+I
Sbjct: 159 DI 160
>gi|89891804|ref|ZP_01203306.1| putative flagellar motor protein MotB [Flavobacteria bacterium
BBFL7]
gi|89515959|gb|EAS18624.1| putative flagellar motor protein MotB [Flavobacteria bacterium
BBFL7]
Length = 287
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 6/142 (4%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPS 108
+ D + VS ++ I + F + + +L IA ++ PS
Sbjct: 126 IAKKMGSTSSDKDLNVSIEETVVMINIDDDLLFKDSSYRVSNDADEILAKIAEVVASEPS 185
Query: 109 TVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
I ++ HTDS +K+N +S ER+ I L ++ + + V G A PI
Sbjct: 186 LEILVEGHTDSRTVKQGSYIKDNWDLSTERSAAIVRRLEEKFGVAPEQLIVAGRASYDPI 245
Query: 164 DTNDTKVGRQNNQRIEIQIFPR 185
ND+K N+R +I I P
Sbjct: 246 AANDSKDNMARNRRTQIVIMPN 267
>gi|67642544|ref|ZP_00441299.1| OmpA domain protein [Burkholderia mallei GB8 horse 4]
gi|121597981|ref|YP_990526.1| hypothetical protein BMASAVP1_0927 [Burkholderia mallei SAVP1]
gi|124381968|ref|YP_001025016.1| hypothetical protein BMA10229_1214 [Burkholderia mallei NCTC 10229]
gi|126447715|ref|YP_001079360.1| hypothetical protein BMA10247_A2189 [Burkholderia mallei NCTC
10247]
gi|166999157|ref|ZP_02265003.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|254176494|ref|ZP_04883152.1| OmpA domain protein [Burkholderia mallei ATCC 10399]
gi|254203448|ref|ZP_04909809.1| OmpA family protein [Burkholderia mallei FMH]
gi|254205327|ref|ZP_04911680.1| OmpA family protein [Burkholderia mallei JHU]
gi|254299607|ref|ZP_04967056.1| OmpA domain protein [Burkholderia pseudomallei 406e]
gi|254356134|ref|ZP_04972411.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|121225779|gb|ABM49310.1| OmpA domain protein [Burkholderia mallei SAVP1]
gi|126240569|gb|ABO03681.1| OmpA domain protein [Burkholderia mallei NCTC 10247]
gi|147745687|gb|EDK52766.1| OmpA family protein [Burkholderia mallei FMH]
gi|147754913|gb|EDK61977.1| OmpA family protein [Burkholderia mallei JHU]
gi|148025117|gb|EDK83286.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|157809319|gb|EDO86489.1| OmpA domain protein [Burkholderia pseudomallei 406e]
gi|160697536|gb|EDP87506.1| OmpA domain protein [Burkholderia mallei ATCC 10399]
gi|238523712|gb|EEP87149.1| OmpA domain protein [Burkholderia mallei GB8 horse 4]
gi|243064713|gb|EES46899.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|261826580|gb|ABM99761.2| OmpA domain protein [Burkholderia mallei NCTC 10229]
Length = 421
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 8/183 (4%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIV 64
+ I + GC + + + + + + + ++ +
Sbjct: 239 AVLSLIALGLFGCFKYALSTRSADVQQRIAAIARMAPPAAPAELRLATLLAGEIAAGTLS 298
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + F + P+++ IA + + P + ++ +TD+
Sbjct: 299 VEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPG-KVTVRGYTDNQPIK 357
Query: 124 KNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
S+ERA + L GV ++R + G PI N T GR N+R+E
Sbjct: 358 SRQFASNEALSEERATQVMQMLQSAGVPASR-LEALGKGGAEPIGDNRTPQGRALNRRVE 416
Query: 180 IQI 182
I +
Sbjct: 417 ITV 419
>gi|114771185|ref|ZP_01448605.1| OmpA/MotB family protein [alpha proteobacterium HTCC2255]
gi|114548110|gb|EAU50997.1| OmpA/MotB family protein [alpha proteobacterium HTCC2255]
Length = 163
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 6/124 (4%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
Q L G+ + V + L + +L A L P+ I I
Sbjct: 35 LQSSLDPAGVEYFNQEIG-----DTVLFLVDQSSLTAEATDLLNKQAEWLLNNPNKSITI 89
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ H D GT + NL + RA +++YL+ RG++ +R +V F + P+ +
Sbjct: 90 EGHADETGTREYNLALGARRAASVQNYLVSRGLTDSRINTVT-FGKERPLAICSDEACWS 148
Query: 174 NNQR 177
N+R
Sbjct: 149 KNRR 152
>gi|297569008|ref|YP_003690352.1| peptidoglycan-associated lipoprotein [Desulfurivibrio alkaliphilus
AHT2]
gi|296924923|gb|ADH85733.1| peptidoglycan-associated lipoprotein [Desulfurivibrio alkaliphilus
AHT2]
Length = 194
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 74/192 (38%), Gaps = 13/192 (6%)
Query: 2 IKELGLSMFIM----TTISGCGL------ASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
IK + ++ I+ +GCG A + + ++ T + + +A+
Sbjct: 5 IKRIFTAVAIVCAVSLFAAGCGKRVAVDPADEPTMEPAVTETKPTHTPWEPAHAWPGEAD 64
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+E + V + G +PV+ F + L + + P +
Sbjct: 65 EESLDDTAAAELAV-KEGRTSGPLMPVYYDF-DRSNIRADQEERLVHNSNYMLDNPRVRV 122
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I+ +TD GT + N+ + + RA K YLI GV++ R + + + PI ++
Sbjct: 123 RIEGNTDERGTREYNMALGERRALSAKKYLIDLGVAAER-LETLSYGEERPISFGRDELS 181
Query: 172 RQNNQRIEIQIF 183
N+R + I
Sbjct: 182 WSLNRRSDFVII 193
>gi|163758789|ref|ZP_02165876.1| probable peptidoglycan-associated lipoprotein precursor [Hoeflea
phototrophica DFL-43]
gi|162284079|gb|EDQ34363.1| probable peptidoglycan-associated lipoprotein precursor [Hoeflea
phototrophica DFL-43]
Length = 167
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 49/161 (30%), Gaps = 27/161 (16%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC V +GD I
Sbjct: 24 GCASKKTLPNNAADLGLAGNATPGS------------------QQDFTV-NVGDRI---- 60
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L A LN++P+ I ++ H D GT + NL + RA
Sbjct: 61 ---FFDTDSSVIRPDAASTLDRQAQWLNQYPTYRITMEGHADERGTREYNLALGARRAAA 117
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
K YL RGV++NR ++ F + P+ D N+R
Sbjct: 118 AKQYLTSRGVAANRIQTIS-FGKERPVAVCDDISCWSQNRR 157
>gi|53715977|ref|YP_106445.1| hypothetical protein BMAA1914 [Burkholderia mallei ATCC 23344]
gi|52421947|gb|AAU45517.1| OmpA domain protein [Burkholderia mallei ATCC 23344]
Length = 426
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 8/183 (4%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIV 64
+ I + GC + + + + + + + ++ +
Sbjct: 244 AVLSLIALGLFGCFKYALSTRSADVQQRIAAIARMAPPAAPAELRLATLLAGEIAAGTLS 303
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + F + P+++ IA + + P + ++ +TD+
Sbjct: 304 VEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPG-KVTVRGYTDNQPIK 362
Query: 124 KNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
S+ERA + L GV ++R + G PI N T GR N+R+E
Sbjct: 363 SRQFASNEALSEERATQVMQMLQSAGVPASR-LEALGKGGAEPIGDNRTPQGRALNRRVE 421
Query: 180 IQI 182
I +
Sbjct: 422 ITV 424
>gi|332704092|ref|ZP_08424180.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332554241|gb|EGJ51285.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 253
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Query: 61 TGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
VVS + + + L+ + + ++ TIL + + + I+ HTDS
Sbjct: 119 DLAVVSSDRNGALLRVQAGAMFDPGSAALKPEAVKIIDKAVTILKER-NFSVVIRGHTDS 177
Query: 120 IGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+N +S RA +I+RG I G+A P+ N T+ R N
Sbjct: 178 HIVHSAQFPSNWELSAARAAASARLVIERGAIDTNRIKAIGYADSRPLVPNSTEENRAFN 237
Query: 176 QRIEIQ 181
+R+E
Sbjct: 238 RRVEFY 243
>gi|91224571|ref|ZP_01259832.1| hypothetical protein V12G01_07518 [Vibrio alginolyticus 12G01]
gi|91190459|gb|EAS76727.1| hypothetical protein V12G01_07518 [Vibrio alginolyticus 12G01]
Length = 430
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 7/155 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKF 92
N + +K ++ I V + D + + + +
Sbjct: 275 NQDATSESKSAPIAEKISMYLATEIGKGLINVEPLQDRVRISLKSQDLFESGSADVVAYI 334
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSS 148
P++ +A L I + HTD +N +S RA + LI
Sbjct: 335 QPVISKLARTLESTQG-KIIVTGHTDDRPIFTSKYPSNWHLSLARATAMSEQLISNSALE 393
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R I G P+ N + R N+RIEI +
Sbjct: 394 GRVI-PEGLGDARPLVENSSDENRAINRRIEIDLL 427
>gi|224582121|ref|YP_002635919.1| hypothetical protein SPC_0290 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224466648|gb|ACN44478.1| hypothetical protein SPC_0290 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 434
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 63/186 (33%), Gaps = 10/186 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
G+++ M T+ G + V + + + + + ++
Sbjct: 250 GIALLAMLTLFGLYSHRMYVQTVTVQQHIDAIGIKLPPPPVPVHKLRLKILLANEIARGL 309
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ V F + + P++ A + + + + HTDS
Sbjct: 310 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA-VTVTGHTDSQP 368
Query: 122 TLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
S++RA + + L GV + R + + G P+ N +K GR N+R
Sbjct: 369 IHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGR-VHIVGKGDTVPVADNGSKAGRAKNRR 427
Query: 178 IEIQIF 183
+EI +
Sbjct: 428 VEILVV 433
>gi|149202409|ref|ZP_01879382.1| hypothetical protein RTM1035_13818 [Roseovarius sp. TM1035]
gi|149144507|gb|EDM32538.1| hypothetical protein RTM1035_13818 [Roseovarius sp. TM1035]
Length = 586
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 54/161 (33%), Gaps = 14/161 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + + L V +GD + E L +
Sbjct: 428 EAEKEDLEKYRSEFFGRLRDVLGQQQ-GVQIVGDRFVFS-SEVLFAPGEADLSAAGQSEI 485
Query: 97 QLIATILNKFP-------STVIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQR 144
+A IL V+ + HTD++ +N +SQ RA + YL
Sbjct: 486 AKVAGILRNVIGDIPEGIDWVLQVDGHTDNVPIIEGARFADNWALSQARALSVVRYLTGA 545
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S G+ P++ DT R N+RIE+++ R
Sbjct: 546 LGFPAGRLSANGYGEFQPVNPEDTPAARAQNRRIELKLTTR 586
>gi|114046351|ref|YP_736901.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113887793|gb|ABI41844.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 514
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 3/150 (2%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKK 91
S T+ N++ + + Q+ +G T + F +
Sbjct: 101 SASTNADNQQNSLLISANNQAMSKEDQEKYSDYQVVGMAATISSTDEMMFGSGSAEATAQ 160
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
LQ +A I I I HTD+ G+ N +S+ RA + + Q G+ + R
Sbjct: 161 AKQKLQKLAAIYKDSKQ-NILITGHTDASGSESLNQTLSEARARYVATLFNQAGIPTERL 219
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+G P+ N + G+ N+R+EI
Sbjct: 220 F-FQGAGESQPVAANTNETGKAKNRRVEIV 248
>gi|13472168|ref|NP_103735.1| hypothetical protein mll2374 [Mesorhizobium loti MAFF303099]
gi|14022913|dbj|BAB49521.1| mll2374 [Mesorhizobium loti MAFF303099]
Length = 366
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 2/151 (1%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE 89
+ + + + + F L+
Sbjct: 210 IADGSKPAAVQTVAAGTTGVGPVATDAAKANFSDEECLNRFAVLSRTGAIYFRPASARLD 269
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
K P+L + ++ K P+ + + +TDS G+ + N +S+ RA + L+
Sbjct: 270 AKSRPLLTEVEGVVGKCPTLKVEVSGYTDSDGSPEANKALSERRAQAVAEALVAG-GVPR 328
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ IS G + P+ NDT + N+RIE
Sbjct: 329 QQISAAGHGEENPVAANDTPKNKALNRRIEF 359
>gi|86146732|ref|ZP_01065053.1| putative protein F-related protein [Vibrio sp. MED222]
gi|85835579|gb|EAQ53716.1| putative protein F-related protein [Vibrio sp. MED222]
Length = 197
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 76/196 (38%), Gaps = 24/196 (12%)
Query: 10 FIMTTISGCGLA-----------SREKKK---------VFLHKSNDTDIVNKRFGSSLDK 49
+ ++GC K + ++ + +G +
Sbjct: 1 MLSIALAGCETTLPTGLFGEDMLQTAPKTDYDIMYPEWGVVQTTHQQGTITTNYGRGVST 60
Query: 50 AEDEFQMQLQDTGIVVSRI-GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFP 107
D ++ L+ I + G+ + + HV+F E + L + + L++
Sbjct: 61 -NDPLEVFLRQNRIDFEVLPGNHVMVKLVQHVNFKTGSTSPEPAYNNWLDTLGSYLSRRQ 119
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I+ HTD+ G+ + N +S++RA +K+ L S+R I RGF P N
Sbjct: 120 DIDVVIEGHTDNTGSDRVNDPLSEQRAKEVKARLESNY-VSSRAIYTRGFGEYVPACNNA 178
Query: 168 TKVGRQNNQRIEIQIF 183
+ G+ N+R+E+ +
Sbjct: 179 SAQGKACNRRVELMLI 194
>gi|332877756|ref|ZP_08445497.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684336|gb|EGJ57192.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 648
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I ++ + L I ++ ++P I I+SHTDS G NL +S
Sbjct: 532 VFEIKEIKFDYNKANIRPDAAVELTKIVEVMREYPKMKIDIRSHTDSRGADSYNLKLSDR 591
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
RA +++++G+ R + +G+ ++ T+ Q N+R E +
Sbjct: 592 RAKATLEWIVKQGIDRKR-LKAKGYGETRLVNGCSNGVPCTEEEHQENRRSEFIVV 646
>gi|254440394|ref|ZP_05053888.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198255840|gb|EDY80154.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 315
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 61/144 (42%), Gaps = 7/144 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL 103
+ ++ Q +++ + V + ++ + +F L ++ +++ + +
Sbjct: 170 EAEEQLRANLQSEIEQGLVTVEQRDGIVFVSLGAGGAFPSGSADLTQQASIIIEELGA-V 228
Query: 104 NKFPSTVIAIQSHTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P++ + + HTD++ ++N ++ RA + + R +S F
Sbjct: 229 TSDPASRVIVSGHTDNVPISFGALYRDNWDLAAARAASVVQAIEATNPVQGRTMSAVSFG 288
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
PI N T GR+ N+RIEI+I
Sbjct: 289 QTQPIADNFTAEGREQNRRIEIEI 312
>gi|126741131|ref|ZP_01756812.1| hypothetical protein RSK20926_01427 [Roseobacter sp. SK209-2-6]
gi|126717768|gb|EBA14489.1| hypothetical protein RSK20926_01427 [Roseobacter sp. SK209-2-6]
Length = 346
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I L+ K + L + I+++ P +I + HTD G+ N+ +S
Sbjct: 234 EILSRSRSVNFAPGTSRLDGKSISFLDSLYDIVSRCPELIIEVGGHTDDKGSEAANIRLS 293
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
Q+RA+ + YL +G+ + R + +G+ P+ N + R N+RI +
Sbjct: 294 QKRANSVVRYLAGKGIQTERLV-AQGYGEASPLVPNTSAANRAKNRRITFVV 344
>gi|42527651|ref|NP_972749.1| OmpA family protein [Treponema denticola ATCC 35405]
gi|41818479|gb|AAS12668.1| OmpA family protein [Treponema denticola ATCC 35405]
Length = 449
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF-PSTV 110
+ + ++ GI +S +++ + + + + + +IA L K P T
Sbjct: 316 ELLLEKHKEKGIELSNPKNIVKIIMYDIRFVADMPDVLPEEMGKIDVIAEALLKLGPYTK 375
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I+ HT + ++ ++S +RA+ I + +RG+ +R ++ G+ P+ ++ +
Sbjct: 376 FLIEGHTADLNRPEDEKILSVQRAERIADEISKRGIDRSRIMTA-GYGSTRPVAPSNNET 434
Query: 171 GRQNNQRIEIQIF 183
N+R+EI +
Sbjct: 435 NMAKNRRVEITVI 447
>gi|262198258|ref|YP_003269467.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262081605|gb|ACY17574.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 533
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 2/138 (1%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ-LIATILNKF 106
D+ + V+ G + + L+ + + +L + L
Sbjct: 394 DEPVAATTRPEPEYKPEVADTGRAVFTKPVTINFDTGQSALDPESMHLLNTQVLPQLEMA 453
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ I+ +TD++G + N +S+ RA + YL+Q+ + + +S RG P+ +N
Sbjct: 454 GGMYVRIEGNTDNVGDKRGNQALSEARAQSVLDYLVQK-GINAKRLSARGNGSDSPVASN 512
Query: 167 DTKVGRQNNQRIEIQIFP 184
T GR N+R +I
Sbjct: 513 KTADGRAANRRTDIVFIS 530
>gi|330995812|ref|ZP_08319709.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
gi|329574542|gb|EGG56107.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
Length = 242
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 80/232 (34%), Gaps = 45/232 (19%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ--- 55
+K L L + +S CG K L + + G+ + +
Sbjct: 1 MKGLKFCALVLSAGMLLSSCGGNMNNTGKGSLIGAGGGAALGTLIGTLASSNKGKGAGIG 60
Query: 56 --------------------------MQLQDTGIVVSRIGDMI---TCYIPVHVSFV-SE 85
Q+++ + + + + F S
Sbjct: 61 AAVGVAVGAGVGALIGKKMDKAKAAAQQVENAQVESVTDANGLQAVKVTFDSGILFNTSS 120
Query: 86 VFLEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL--------KNNLLISQERADV 136
L L A+ LN +AI+ +TD+ G + N+ +S +RA+
Sbjct: 121 SALSSNATASLAKFASTVLNVNKDMDVAIKGYTDNQGWKNSTAAQSVQKNMDLSLQRANS 180
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ +YL Q GVSS + SV G P+ N T GR+ N+R+E+ ++ +
Sbjct: 181 VSNYLKQCGVSSTQITSVEGLGEADPVADNSTAAGREQNRRVEVYLYASEKM 232
>gi|325287332|ref|YP_004263122.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324322786|gb|ADY30251.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 647
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 6/143 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+K E+ + + +L + P L +A + + P
Sbjct: 506 NKIEEVVLELSNSKEATSVGSDLSNYLKLKSIYFDTNSSYLRVESYPDLDKVANYMLENP 565
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ VI + +HTDS + NL +S RA YL+ +GV ++R I+ GF ++
Sbjct: 566 TVVIEVGAHTDSTESDTYNLWLSNRRAKSTVKYLVSKGVDASR-ITGIGFGESQLLNKCK 624
Query: 168 -----TKVGRQNNQRIEIQIFPR 185
+ N+R E I +
Sbjct: 625 NGVKCSNEEHAVNRRSEFIIINK 647
>gi|126664115|ref|ZP_01735108.1| putative flagellar motor protein MotB [Flavobacteria bacterium
BAL38]
gi|126623829|gb|EAZ94524.1| putative flagellar motor protein MotB [Flavobacteria bacterium
BAL38]
Length = 278
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 5/133 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ D I ++ +I I ++ F + K +L +A ++N P ++ H
Sbjct: 128 IDDPDININVEKGVIMISIADNLLFKSGSYEVSDKAKGVLAKVAKVINSKPDFECMVEGH 187
Query: 117 TDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD++ +N +S +RA I L + + + + G + P+ ND+ R
Sbjct: 188 TDNVPIKNAVLLDNWDLSVKRATSIVRVLHKELGVNPKQLIPAGRSSYIPLVENDSPANR 247
Query: 173 QNNQRIEIQIFPR 185
N+R +I I P+
Sbjct: 248 AKNRRTKIIIMPK 260
>gi|194290119|ref|YP_002006026.1| outer membrane protein, ompa family [Cupriavidus taiwanensis LMG
19424]
gi|193223954|emb|CAQ69963.1| putative outer membrane protein, ompA family [Cupriavidus
taiwanensis LMG 19424]
Length = 177
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 61/178 (34%), Gaps = 25/178 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L M ++GC A RE + LQ G
Sbjct: 22 LAAVMLAGLALAGCQTAPREG-----------------------RLSPAQLAVLQQEGFT 58
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
++ G + V F ++ + +L I L+ + + HTD G+ +
Sbjct: 59 LTGEGWELGLTDKVLFGFNEDLIEGDRAANVL-RIGRALSGVGIERLRVDGHTDDAGSAE 117
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S RA+ + L+ + I VRG P+ N T GR N+R+ I +
Sbjct: 118 YNQSLSVRRAEAVAR-LLADAGFTRDNIEVRGLGKSRPVADNRTAAGRAENRRVAIIV 174
>gi|163788754|ref|ZP_02183199.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
gi|159875991|gb|EDP70050.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
Length = 636
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ + + + + D I + + L+ I ++ + S +I I+
Sbjct: 499 NEKVNEADLSLIPLIDFSQIVINPIFFDFDKSKIRTDAQYELENIVDVMRRHKSMIIKIE 558
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TK 169
SHTDS G K NL +S RA + YLI RGV +NR S G+ ++ T+
Sbjct: 559 SHTDSRGRDKYNLKLSDRRAKSTRDYLISRGVEANRIESAIGYGETQLLNNCGNRVKCTE 618
Query: 170 VGRQNNQRIEIQIFPRGN 187
Q N+R I N
Sbjct: 619 EEHQVNRRSYFYIISEDN 636
>gi|221200412|ref|ZP_03573454.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
gi|221206092|ref|ZP_03579106.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221174104|gb|EEE06537.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221179753|gb|EEE12158.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
Length = 159
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 63/181 (34%), Gaps = 25/181 (13%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+G ++ + SGC A + + L+ G
Sbjct: 4 VGATLLGVLLSSGCHTAPPHRG-----------------------LTETQVTTLKSAGFK 40
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ G P + L+ +++ I L+ + + +TD GT
Sbjct: 41 ETEQGFEFGAAGP-ILFDFDRYNLKPDVRRIVERIGRTLHSAGIDGVRVYGYTDDEGTDA 99
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++ +S+ RA+V+ L+ R I++ G P+ N VGR N+R I + P
Sbjct: 100 YDMELSRRRAEVVAIELVD-VGLDARRIAIVGRGKHDPVGDNRMPVGRAQNRRAAIVVSP 158
Query: 185 R 185
R
Sbjct: 159 R 159
>gi|83949565|ref|ZP_00958298.1| OmpA domain protein [Roseovarius nubinhibens ISM]
gi|83837464|gb|EAP76760.1| OmpA domain protein [Roseovarius nubinhibens ISM]
Length = 333
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 45/108 (41%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L L +A L + IA+ HTD+ G N+ IS++RA
Sbjct: 223 LGDLDFATGSATLGPGPFASLTALAAYLKGDGARRIALVGHTDATGGRDINISISRQRAR 282
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ L++ + G Y PI +N T+ GRQ N+R+E +
Sbjct: 283 AVLDRLVEGHGVPRAQLEADGVGYLAPIASNLTEAGRQANRRVEAVLL 330
>gi|119897401|ref|YP_932614.1| flagellar motor protein MotD [Azoarcus sp. BH72]
gi|119669814|emb|CAL93727.1| flagellar motor protein MotB [Azoarcus sp. BH72]
Length = 279
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
+ +R + ++ QD + +S I I V F
Sbjct: 87 STRSPEEEAKRQQTAQRMRNMAEEIRRVLAPLTQDGQVSISEGAFGIAVEINASVLFAPG 146
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSY 140
E L + L+ +A +L I I+ HTD+I +N +S RA +
Sbjct: 147 EATLGAPAVSALRAVAQVLAG-AEFPITIEGHTDNIPISNLRFPSNWELSAVRASSVVRL 205
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
I+ ++ G+A + P+ NDT GR N+R+ I I R
Sbjct: 206 FIE-SGVRAERLTAAGYADQRPVAGNDTDAGRARNRRVTIMIESR 249
>gi|119468232|ref|ZP_01611358.1| putative outer membrane protein; signal peptide [Alteromonadales
bacterium TW-7]
gi|119448225|gb|EAW29489.1| putative outer membrane protein; signal peptide [Alteromonadales
bacterium TW-7]
Length = 351
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 64/154 (41%), Gaps = 4/154 (2%)
Query: 37 DIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
D N + DK + + TG + ++ + + + +++L
Sbjct: 198 DSDNDNILDADDKCPNTPMTDAVDGTGCTLYEDKEVTVSLL--VTFPNDKAAVSQRYLDD 255
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ +A+ L +P T + ++ HT ++G N ++S++RAD + LI ++ I+
Sbjct: 256 IDQVASFLKDYPDTTVLLEGHTSAVGKATYNKMLSKKRADSVAKQLIA-DGIASDRITTV 314
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
G + + +T N+R+E I +K
Sbjct: 315 GLGEERLKNEANTAAAHAENRRVEAHIKTIKTVK 348
>gi|71906384|ref|YP_283971.1| flagellar motor protein MotD [Dechloromonas aromatica RCB]
gi|71846005|gb|AAZ45501.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 257
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 7/136 (5%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTV 110
Q + + + +T I + F + L+ + + IA +L
Sbjct: 109 QALQPLVAQGKVRLLETSRGVTIEINDSILFPAGQAKLQSASISAMLAIAQVLAA-SDFP 167
Query: 111 IAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
I I+ HTD++ +N +S RA + ++ G+ P++TN
Sbjct: 168 ITIEGHTDNVPIATAQFPSNWELSAMRATTVLRLFNDG-GVGAERLTAIGYGETRPLETN 226
Query: 167 DTKVGRQNNQRIEIQI 182
T GR N+R+ I I
Sbjct: 227 TTVEGRARNRRVSILI 242
>gi|126663670|ref|ZP_01734666.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
gi|126624253|gb|EAZ94945.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
Length = 625
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++ + + L + ++N++P VI +SHTDS G+ N+ +S R
Sbjct: 513 VILQPIYFEFNKSNITAEGAAELDKLVAVMNEYPEMVIFAKSHTDSRGSDSYNMKLSDRR 572
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND--TKVGRQNNQRIEIQIFPR 185
A YLI + + IS +GF P T+ N+R E I +
Sbjct: 573 AKSTVQYLISK-GIAKERISGQGFGESEPKVACKSCTEEEHAQNRRSEFLIVKK 625
>gi|30314418|gb|AAP15418.1| outer membrane lipoprotein precursor [Burkholderia cenocepacia]
gi|30314424|gb|AAP15421.1| outer membrane lipoprotein precursor [Burkholderia cenocepacia]
gi|30314448|gb|AAP15433.1| outer membrane lipoprotein precursor [Burkholderia cenocepacia]
Length = 150
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 56/165 (33%), Gaps = 19/165 (11%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYI 76
C + K + T + V + D
Sbjct: 1 CKSGVKLDDKANNAGAVSTQPSADNVAQ-----------------VNVDPLNDPNSPLAK 43
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ ++ P++Q A L P + IQ +TD GT + NL + Q+RA+
Sbjct: 44 RSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEA 103
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ + GV+ ++ +V + P T + N+R ++
Sbjct: 104 VRRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147
>gi|92118969|ref|YP_578698.1| OmpA/MotB [Nitrobacter hamburgensis X14]
gi|91801863|gb|ABE64238.1| OmpA/MotB [Nitrobacter hamburgensis X14]
Length = 164
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 57/174 (32%), Gaps = 30/174 (17%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+L + + ++ C + + +
Sbjct: 12 KLAAVLAVALSMGACANKNPLDGAGGMANAATPGSQQD---------------------- 49
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V +GD + + L + + L+ A L + I+ H D GT
Sbjct: 50 FVVNVGDRV-------FFESDQTNLSPQAITTLEKQARWLQTYNRYSFTIEGHADERGTR 102
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N+ + RA ++S+L RG++ +R ++ + + P+ + N+R
Sbjct: 103 EYNIALGARRAQTVRSFLASRGINPSRMRTIS-YGKERPVAVCNDISCWSQNRR 155
>gi|238782712|ref|ZP_04626742.1| OmpA family protein [Yersinia bercovieri ATCC 43970]
gi|238716372|gb|EEQ08354.1| OmpA family protein [Yersinia bercovieri ATCC 43970]
Length = 168
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 53/179 (29%), Gaps = 27/179 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + ++GC E LQ+ G
Sbjct: 15 LSFFAICLLVLAGCQTKPA-------------------------GLSAEQIAALQEQGFK 49
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
++ G + L +Q I L T + HTD++G
Sbjct: 50 LTDNGWEFGL-ANKVLFDSDVRKLNPSGEQTVQNIGKALTAVGITHFRVDGHTDAMGEDS 108
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA + + + I VRG P+ N T GR N+R+ + +
Sbjct: 109 YNQQLSYQRAAAVAD-TLTTIGIPRKNIDVRGRGKLEPVADNRTAKGRAENRRVAMIVT 166
>gi|114777572|ref|ZP_01452553.1| motb protein [Mariprofundus ferrooxydans PV-1]
gi|114552043|gb|EAU54560.1| motb protein [Mariprofundus ferrooxydans PV-1]
Length = 232
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 56/138 (40%), Gaps = 8/138 (5%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPST 109
+ + D + + D + IP + F L+ + + L +A +L P
Sbjct: 95 RAIMKNSIMDHKVRGVILNDRLYLRIPDAILFDRGSAVLKPESVKTLVKLAQMLAMSPG- 153
Query: 110 VIAIQSHTD-----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I +Q HT+ + +S RA + ++++ S +S+ G+ PI
Sbjct: 154 NIRVQGHTNANIDLDNSAFDDPWSLSLARAASVL-HILEDEGVSPTRLSLAGYGPSQPIS 212
Query: 165 TNDTKVGRQNNQRIEIQI 182
T T GR N+R+EI +
Sbjct: 213 TEATPFGRSKNRRVEIMV 230
>gi|299067718|emb|CBJ38927.1| Peptidoglycan-associated lipoprotein, protein pal, component of
tol-pal system [Ralstonia solanacearum CMR15]
Length = 171
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 1/116 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
++ ++ +L A L + IQ +TD GT +
Sbjct: 56 ELTDPNSPLAKRSVYFDFDSYAVKPEYQGLLTQHAHYLQSHNQRKVLIQGNTDERGTSEY 115
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL + Q+RA+ ++ L GV ++ SV + P + + N+R +I
Sbjct: 116 NLALGQKRAEAVRRALSSLGVPDSQMESVS-LGKEKPQASGHDEESWAQNRRSDIV 170
>gi|15639612|ref|NP_219062.1| hypothetical protein TP0624 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025850|ref|YP_001933622.1| hypothetical protein TPASS_0624 [Treponema pallidum subsp. pallidum
SS14]
gi|3322920|gb|AAC65597.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018425|gb|ACD71043.1| hypothetical protein TPASS_0624 [Treponema pallidum subsp. pallidum
SS14]
gi|291059994|gb|ADD72729.1| OmpA family protein [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 476
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF-PSTVIAIQSHTDSI 120
G+ V + + + + + + +IAT L K P T I+ HT +
Sbjct: 353 GVGVRSGINTLKITVYDVRFVANSPEILASEKDRVDVIATALKKMGPYTRFLIEGHTADL 412
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ +S RA + + R I+ G PI +DT + N+R+EI
Sbjct: 413 HRPQEEAALSVARAQRMAQE-LSRRGIEMTRITTAGHGATKPIAPSDTHANKAKNRRVEI 471
Query: 181 QIF 183
I
Sbjct: 472 TIL 474
>gi|114776299|ref|ZP_01451344.1| OmpA family protein [Mariprofundus ferrooxydans PV-1]
gi|114553129|gb|EAU55527.1| OmpA family protein [Mariprofundus ferrooxydans PV-1]
Length = 167
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 1/131 (0%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E + Q Q VV+ + L+ L A LN S
Sbjct: 36 EAKPAPQAQVVQPVVTTTTSVTKPSTNAVYFAFDSSALDASARATLDGYAAWLNANNSEN 95
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I I+ + D G+ + NL + Q RAD ++ YL G+++ R +V F + P+ +
Sbjct: 96 ITIEGNCDERGSREYNLALGQRRADSVRDYLTANGIAAGRIDTVS-FGEERPVCKGTGEA 154
Query: 171 GRQNNQRIEIQ 181
N+R +I
Sbjct: 155 CWAQNRRGDIV 165
>gi|299134179|ref|ZP_07027372.1| peptidoglycan-associated lipoprotein [Afipia sp. 1NLS2]
gi|298590926|gb|EFI51128.1| peptidoglycan-associated lipoprotein [Afipia sp. 1NLS2]
Length = 162
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 64/174 (36%), Gaps = 32/174 (18%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + ++ C + + + + +
Sbjct: 12 KFAAVLAVALSMGACANKNGDLNGMAGAATPGSQQD------------------------ 47
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V +GD + + L ++ + L+ A L ++P I+ H D GT
Sbjct: 48 FVVNVGDRV-------FFDSDQTELSQQAINTLEKQAQWLQQYPRYTFTIEGHADERGTR 100
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N+ + +RA ++++L+ RG+S++R ++ + + P+ + N+R
Sbjct: 101 EYNIALGAKRAQSVRNFLVSRGISASRMRTIS-YGKERPVAVCNDISCWSQNRR 153
>gi|89902522|ref|YP_524993.1| Type I secretion outer membrane protein TolC [Rhodoferax
ferrireducens T118]
gi|89347259|gb|ABD71462.1| Type I secretion outer membrane protein, TolC [Rhodoferax
ferrireducens T118]
Length = 609
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ + L L + + V+ HTDS+G+ + N +S RA+ +
Sbjct: 498 DTLFDSGKSNLKAEGLRSLDSLLARIKGVQLDVVIAVGHTDSVGSEEFNNRLSLARAESV 557
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++YL+ +GV R + G PI N T+ G N+R++++
Sbjct: 558 RAYLVGKGVDVKR-VRAVGKGESQPIADNATEAGHAKNRRVDVE 600
>gi|88704268|ref|ZP_01101982.1| flagellar motor protein MotB [Congregibacter litoralis KT71]
gi|88701319|gb|EAQ98424.1| flagellar motor protein MotB [Congregibacter litoralis KT71]
Length = 272
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 57/171 (33%), Gaps = 11/171 (6%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
++ L + + + + + + ++ + I
Sbjct: 96 AAANSASTNPNAALGDIQAEEEIAGVETA----LQSAVGDLVAPDRLAITGNDKWLEIKI 151
Query: 77 PVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
P + F S L +PMLQ +A L P+ + +Q HTD+ N S
Sbjct: 152 PARMLFPSGSRSLLASSIPMLQRLAETLGGLPN-EVVVQGHTDNQPIR-NGQFPSNWELS 209
Query: 136 VIKSYLIQRG----VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ + R +S GF PI N T+ R N+R+ I +
Sbjct: 210 TARAAAVARVFEDEGIDPSRLSAVGFGPNRPITDNLTEESRAENRRVVILV 260
>gi|283835685|ref|ZP_06355426.1| OmpA family protein [Citrobacter youngae ATCC 29220]
gi|291068900|gb|EFE07009.1| OmpA family protein [Citrobacter youngae ATCC 29220]
Length = 160
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 1/142 (0%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ K E ++ G GD + ++ L + +Q +A
Sbjct: 17 AGCQAPQGKFTPEQIAAMKSYGFT-EVSGDWSLGLSDNILFDKNDYKLRPESEKQIQEMA 75
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ L + HTD+ G N +S +RA+V+ Q ++ +G K
Sbjct: 76 SKLAATGLNHARLDGHTDNYGEDSYNEALSLKRANVVADAWAQGANIPRTNLTTQGLGKK 135
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
YPI +N T GR N+R+ + I
Sbjct: 136 YPIASNQTSKGRAENRRVAVVI 157
>gi|304320241|ref|YP_003853884.1| OmpA family protein [Parvularcula bermudensis HTCC2503]
gi|303299143|gb|ADM08742.1| OmpA family protein [Parvularcula bermudensis HTCC2503]
Length = 175
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 56/148 (37%), Gaps = 7/148 (4%)
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFL 88
+ + V+ + + + + + + + +E L
Sbjct: 23 STPEPEASAPVDAVVPERSARVDQAPEGPIPGSAADLEQNVGN------RVFFEYNEYAL 76
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
++ + L+ A + ++P I ++ H D GT + NL + RA KSYL+ G+
Sbjct: 77 GQESIATLRRQAAWMKEYPEARIRLEGHADERGTREYNLALGARRASAAKSYLVDLGIDP 136
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+R I+ + + PID T N+
Sbjct: 137 SR-ITTVSYGKERPIDPRSTPEAWARNR 163
>gi|325275196|ref|ZP_08141163.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
gi|324099683|gb|EGB97562.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
Length = 309
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ L+ L +I + PS + + H+D+ G N +S+
Sbjct: 172 VRQTQVGFPGGGIELDDAAKARLDVILEYMKADPSVNHVELNGHSDNSGNRLTNRDLSRR 231
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI----QIFPRGNI 188
RA + Y + + I+VR +YP+ N+T R N+R+ I + P +
Sbjct: 232 RALAVADYF-KAHGIKDEQITVRFHGERYPVAKNNTAANRARNRRVNIELDRVVVPEKPV 290
Query: 189 KK 190
+K
Sbjct: 291 EK 292
>gi|163740457|ref|ZP_02147851.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
gi|161386315|gb|EDQ10690.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
Length = 326
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 2/178 (1%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTD--IVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ +S G A+ + + T S A + L +++
Sbjct: 149 IVTLLVSRSGNATFVQVIEVTPEGLSTPVITDGTTPASGGTDAAPTVALPLIGAAELITG 208
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + V L K L +A L + P + + HTD++G+L+ N+
Sbjct: 209 LRGNGRAVLADLEFETGAVTLGAKPYDSLAALAEFLIQNPDFDVLLVGHTDTVGSLEQNI 268
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
IS+ RAD ++ L+ ++V G + P+ TN T GR+ N+R+E+ + R
Sbjct: 269 AISERRADAVRRRLLADSAVGGARVAVAGAGFMAPLTTNLTPEGREANRRVEVVLIRR 326
>gi|299134154|ref|ZP_07027347.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
gi|298590901|gb|EFI51103.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
Length = 338
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---TV 110
+ + +GD L + L +AT L K P+ V
Sbjct: 202 ILGDRPDIRIVGDRFVFQ-SEVFFDSGSAALLPEGRNELDQLATALGDLEKKIPAEIPWV 260
Query: 111 IAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ + HTD + K+N +S RA + YLI RGVS R ++ GF P+DT
Sbjct: 261 LRVDGHTDVRPINSPQFKSNWDLSAARAISVVQYLISRGVSPQRLVAA-GFGEFQPLDTG 319
Query: 167 DTKVGRQNNQRIEIQIFPR 185
T+ + N+RIE+++ +
Sbjct: 320 TTEEAYKRNRRIELKLTEK 338
>gi|153831721|ref|ZP_01984388.1| outer membrane protein OmpA [Vibrio harveyi HY01]
gi|148872231|gb|EDL71048.1| outer membrane protein OmpA [Vibrio harveyi HY01]
Length = 321
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ ++N +P + I ++D+ G+ N ++++RA + +
Sbjct: 211 FGLESAELQDAS--AFNGTVELMNTYPQAQVEINGYSDTTGSEAYNQQLTEKRAQAVAEH 268
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G++++R +V+G P+ +N+T+ GR+ N+R+E+ +
Sbjct: 269 FQAEGIAADRM-TVKGMGEANPVASNETREGREENRRVEVVV 309
>gi|86132229|ref|ZP_01050824.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85817148|gb|EAQ38331.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 674
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 5/140 (3%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
DK F++ V + + + + +L +A L K+
Sbjct: 534 DKDPSRFELLTDTQSPQVVEKEGKLFIDVAPIYFDFDLYSIREDSQVVLDELAAKLIKYK 593
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ IQSHTDS G N+ +SQ RA YL+++ I +G+ P+
Sbjct: 594 RIKMKIQSHTDSRGPEAYNVPLSQNRAKATFDYLVEK-GIDPTRIQYQGYGNSQPVVECP 652
Query: 168 ----TKVGRQNNQRIEIQIF 183
T+ Q N+R E +I
Sbjct: 653 AGQCTEEEHQLNRRSEFEIT 672
>gi|163758837|ref|ZP_02165924.1| hypothetical protein HPDFL43_15477 [Hoeflea phototrophica DFL-43]
gi|162284127|gb|EDQ34411.1| hypothetical protein HPDFL43_15477 [Hoeflea phototrophica DFL-43]
Length = 343
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------ST 109
++ + V +GD + L + +A +N+ +
Sbjct: 205 EILSSREDVRVVGDRFVFQ-SEVLFPSGGNELNPAGQEQMAKLAEAINELSREIPEEINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G +N +S RA + YLI+ GV +NR ++ GF PI
Sbjct: 264 VLRVDGHTDNVPLSGTGRYADNWELSTARATSVVKYLIENGVPANRLVAA-GFGEFQPIA 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
D+ R N+RIE+++ R
Sbjct: 323 DGDSDEARATNRRIELKLTER 343
>gi|145640334|ref|ZP_01795918.1| scaffold protein [Haemophilus influenzae R3021]
gi|145274920|gb|EDK14782.1| scaffold protein [Haemophilus influenzae 22.4-21]
Length = 153
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 62/179 (34%), Gaps = 33/179 (18%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + L + ++ C ++ + + G S+ +
Sbjct: 1 MNKFVKSLLVAGSVAALAACSSSNND--------AAGNGAAQTFGGYSVADLQQ------ 46
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + +++ +L A LN P+ + ++ +TD
Sbjct: 47 ----------------RYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTD 90
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RAD +K YL +GV + + +V + + P + N+R
Sbjct: 91 ERGTPEYNIALGQRRADAVKGYLTGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 148
>gi|29467513|dbj|BAC66780.1| OmpA-like outer membrane protein [Acidithiobacillus ferrooxidans]
Length = 217
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I L + +L +A+ P V+ + + +GT NL +S+ R
Sbjct: 101 ITITGINFKFDSYKLLDHDIRVLDEVASFAKNHPEAVLDVNGYCSKVGTYAYNLKLSKLR 160
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
A + YL GV+S+R + ++G +Y P+ TN T GR NQR+EI
Sbjct: 161 AQSVAQYLAHHGVASDRMV-LKGHSYDNPVATNATPQGRFLNQRVEI 206
>gi|330820746|ref|YP_004349608.1| putative outer membrane protein A precursor [Burkholderia gladioli
BSR3]
gi|327372741|gb|AEA64096.1| putative outer membrane protein A precursor [Burkholderia gladioli
BSR3]
Length = 222
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 74 CYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ V F S+ L L + + + +++ +TDS+G+ + NL +S+
Sbjct: 112 VNLSGDVLFASDHATLAPSARESLDQLLSERTDRVYSEVSVTGYTDSVGSDEYNLDLSKR 171
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA+ + + + + V G P+ +N T GR +N+R+EI + P
Sbjct: 172 RAESVAA-YLSAHGLKTGSMKVSGRGKADPVASNMTAEGRASNRRVEITLSP 222
>gi|332754029|gb|EGJ84401.1| ompA family protein [Shigella flexneri K-671]
gi|333015875|gb|EGK35211.1| ompA family protein [Shigella flexneri K-304]
Length = 127
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 48/117 (41%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + ++ L + +Q +A L T + HTD+ G
Sbjct: 8 ESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSY 67
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S +RA+V+ G ++ +G KYPI +N T GR N+R+ + I
Sbjct: 68 NEGLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVI 124
>gi|320107635|ref|YP_004183225.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4]
gi|319926156|gb|ADV83231.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4]
Length = 249
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 65/217 (29%), Gaps = 37/217 (17%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ-------- 57
LS+ I+ GC + + + + + + + + + + Q
Sbjct: 19 ALSLGIVALTVGCSTKNYVRSQTAPIVAQTNQLEKRTGDDQRNIQDTDARAQQGIAGAKS 78
Query: 58 -----------------------------LQDTGIVVSRIGDMITCYIPVHVSFVSEVFL 88
+ V+ + + L
Sbjct: 79 AAATADQHAMAAGQSADAANVNAKDAYNRVDSLAGTVAGLDKYKPLSDVSVTFRFDKAVL 138
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
L +A+ L ++ + TD++G N +SQ RAD + +YL +
Sbjct: 139 TAADKKELDAVASSLQTTRHYLLEVTGGTDAVGDAAYNYALSQRRADAVVTYLAAKYNIP 198
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ G + TN T GR N+R+++++
Sbjct: 199 PHKFYMVGIGKDQEVATNKTAAGRAKNRRVQVRVLSN 235
>gi|39934198|ref|NP_946474.1| OmpA/MotB [Rhodopseudomonas palustris CGA009]
gi|192289724|ref|YP_001990329.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris
TIE-1]
gi|39648046|emb|CAE26566.1| omp16 protein [Rhodopseudomonas palustris CGA009]
gi|192283473|gb|ACE99853.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris
TIE-1]
Length = 165
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 58/183 (31%), Gaps = 30/183 (16%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ + + ++ C + T + F
Sbjct: 12 KVAAVLAVALSMGACANKNGLGGADGAMAGAATPGSQQDF-------------------- 51
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V +GD + + L + L L + I+ H D GT
Sbjct: 52 -VVNVGDRV-------FFESDQSDLSPQAAATLDKQVQWLQTYSRYTFTIEGHADERGTR 103
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N+ + RA +++YL+ RG+ + R ++ + + P+ + N+R + +
Sbjct: 104 EYNIALGARRAQSVRNYLVSRGIDAQRMRTIS-YGKERPVAVCNDISCWSQNRRA-VTVL 161
Query: 184 PRG 186
G
Sbjct: 162 NAG 164
>gi|16272329|ref|NP_438542.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae Rd KW20]
gi|68248984|ref|YP_248096.1| outer membrane protein P6 [Haemophilus influenzae 86-028NP]
gi|145630448|ref|ZP_01786229.1| outer membrane protein P6 precursor [Haemophilus influenzae R3021]
gi|145632628|ref|ZP_01788362.1| scaffold protein [Haemophilus influenzae 3655]
gi|145634623|ref|ZP_01790332.1| outer membrane protein P6 precursor [Haemophilus influenzae PittAA]
gi|145638710|ref|ZP_01794319.1| outer membrane protein P6 precursor [Haemophilus influenzae PittII]
gi|148825337|ref|YP_001290090.1| outer membrane protein P6 [Haemophilus influenzae PittEE]
gi|229844456|ref|ZP_04464596.1| outer membrane protein P6 precursor [Haemophilus influenzae 6P18H1]
gi|229846468|ref|ZP_04466576.1| outer membrane protein P6 precursor [Haemophilus influenzae 7P49H1]
gi|260580556|ref|ZP_05848384.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae RdAW]
gi|260582355|ref|ZP_05850148.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae NT127]
gi|319775690|ref|YP_004138178.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae F3047]
gi|319898097|ref|YP_004136294.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae F3031]
gi|329122256|ref|ZP_08250844.1| peptidoglycan-associated lipoprotein [Haemophilus aegyptius ATCC
11116]
gi|129596|sp|P10324|PAL_HAEIN RecName: Full=Outer membrane protein P6; Short=OMP P6; AltName:
Full=15 kDa peptidoglycan-associated lipoprotein;
Short=PC protein; Flags: Precursor
gi|148860|gb|AAA24940.1| PC protein precursor [Haemophilus influenzae]
gi|148961|gb|AAA24994.1| outer membrane protein P6 precursor [Haemophilus influenzae]
gi|1573351|gb|AAC22039.1| peptidoglycan-associated outer membrane lipoprotein (pal)
[Haemophilus influenzae Rd KW20]
gi|68057183|gb|AAX87436.1| outer membrane protein P6 precursor [Haemophilus influenzae
86-028NP]
gi|144984183|gb|EDJ91620.1| outer membrane protein P6 precursor [Haemophilus influenzae R3021]
gi|144986823|gb|EDJ93375.1| scaffold protein [Haemophilus influenzae 3655]
gi|145268168|gb|EDK08163.1| outer membrane protein P6 precursor [Haemophilus influenzae PittAA]
gi|145272305|gb|EDK12213.1| outer membrane protein P6 precursor [Haemophilus influenzae PittII]
gi|148715497|gb|ABQ97707.1| outer membrane protein P6 precursor [Haemophilus influenzae PittEE]
gi|229810561|gb|EEP46279.1| outer membrane protein P6 precursor [Haemophilus influenzae 7P49H1]
gi|229812705|gb|EEP48394.1| outer membrane protein P6 precursor [Haemophilus influenzae 6P18H1]
gi|260092898|gb|EEW76833.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae RdAW]
gi|260094723|gb|EEW78618.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae NT127]
gi|301169083|emb|CBW28680.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae 10810]
gi|309750200|gb|ADO80184.1| Peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae R2866]
gi|309972460|gb|ADO95661.1| Peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae R2846]
gi|317433603|emb|CBY81987.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae F3031]
gi|317450281|emb|CBY86497.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae F3047]
gi|327473817|gb|EGF19234.1| peptidoglycan-associated lipoprotein [Haemophilus aegyptius ATCC
11116]
Length = 153
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 62/179 (34%), Gaps = 33/179 (18%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + L + ++ C ++ + + G S+ +
Sbjct: 1 MNKFVKSLLVAGSVAALAACSSSNND--------AAGNGAAQTFGGYSVADLQQ------ 46
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + +++ +L A LN P+ + ++ +TD
Sbjct: 47 ----------------RYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTD 90
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RAD +K YL +GV + + +V + + P + N+R
Sbjct: 91 ERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 148
>gi|325523698|gb|EGD01964.1| OmpA family protein [Burkholderia sp. TJI49]
Length = 226
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 6/134 (4%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
GI + + + I + F + L + P+L IA L + I
Sbjct: 92 LDSLKAHGGISLVKAPHGVEIGIDAKILFNVGDARLLPESAPVLDRIALALGAHATGDIL 151
Query: 113 IQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++ HTD + ++N +S RA + YL +R + ++ G A P+ D
Sbjct: 152 VEGHTDRVPIANAKYESNWELSSARAGSVVRYLAER-GVAPHRLAAVGRADTQPLVAGDD 210
Query: 169 KVGRQNNQRIEIQI 182
R N+R+ I +
Sbjct: 211 AASRARNRRVTIFV 224
>gi|228910334|ref|ZP_04074150.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200]
gi|229032155|ref|ZP_04188131.1| OmpA/MotB domain protein [Bacillus cereus AH1271]
gi|228729161|gb|EEL80161.1| OmpA/MotB domain protein [Bacillus cereus AH1271]
gi|228849286|gb|EEM94124.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200]
Length = 123
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQ 131
+ + + ++ + L + + ++++L I + HTD++ +N +S
Sbjct: 5 LENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWELST 64
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+RA L+Q S G+ I NDT+ G+ N+R+E+ I P
Sbjct: 65 QRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFILP 117
>gi|167896753|ref|ZP_02484155.1| hypothetical protein Bpse7_23620 [Burkholderia pseudomallei 7894]
Length = 389
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 8/183 (4%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIV 64
+ I + GC + + + + + + + ++ +
Sbjct: 207 AVLSLIALWLFGCFKYALSTRSADVQQRIAAIARMAPPAAPAELRLATLLAGEIAAGTLS 266
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + F + P+++ IA + + P + ++ +TD+
Sbjct: 267 VEENARRSSVMFRGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPG-KVTVRGYTDNQPIK 325
Query: 124 KNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
S+ERA + L GV ++R + G PI N T GR N+R+E
Sbjct: 326 SRQFASNEALSEERATQVMQMLQSAGVPASR-LEALGKGGAEPIGDNRTPQGRALNRRVE 384
Query: 180 IQI 182
I +
Sbjct: 385 ITV 387
>gi|304393352|ref|ZP_07375280.1| outer membrane lipoprotein Omp16 [Ahrensia sp. R2A130]
gi|303294359|gb|EFL88731.1| outer membrane lipoprotein Omp16 [Ahrensia sp. R2A130]
Length = 174
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 25/174 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L +S+ + ++GC + + GS+ D
Sbjct: 15 LIVSLSALVAVTGCSRKKPLPDNANQLGLGNGNTNGAAAGSTQD---------------- 58
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
T + V F ++ L L AT L+++ + I ++ H D GT
Sbjct: 59 -------FTVNVGDRVFFTTDSTSLTGDARATLDKQATWLSRYGNYSIVVEGHADERGTR 111
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ NL + RA + YL+ RGV+ R I F + P+ + N+R
Sbjct: 112 EYNLALGARRAAATRDYLVARGVNRGR-IRTISFGKERPVAVCNDISCFSQNRR 164
>gi|167921374|ref|ZP_02508465.1| hypothetical protein BpseBC_22683 [Burkholderia pseudomallei
BCC215]
Length = 396
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 8/183 (4%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIV 64
+ I + GC + + + + + + + ++ +
Sbjct: 214 AVLSLIALGLFGCFKYALSTRSADVQQRIAAIARMAPPAAPAELRLATLLAGEIAAGTLS 273
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + F + P+++ IA + K P + ++ +TD+
Sbjct: 274 VEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPG-KVTVRGYTDNQPIK 332
Query: 124 KNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
S+ERA + L GV ++R + G PI N T GR N+R+E
Sbjct: 333 SRQFASNEALSEERATQVMQMLQSAGVPASR-LEALGKGGVEPIGDNRTPQGRALNRRVE 391
Query: 180 IQI 182
I +
Sbjct: 392 ITV 394
>gi|172062649|ref|YP_001810300.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171995166|gb|ACB66084.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 228
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 6/134 (4%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ I + R I I + F + L P+L IA L++ + I
Sbjct: 94 LDALKTNGRISLVRAPHGIEIGIDAKILFNVGDARLLPDATPVLSEIARALSEHATGDIL 153
Query: 113 IQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++ HTDS ++N +S RA + YL R + ++ G A P+ +D
Sbjct: 154 VEGHTDSAPIANAKYESNWELSSARAGSVVRYLADR-GVAPHRLAAIGRADTQPLVASDD 212
Query: 169 KVGRQNNQRIEIQI 182
R N+R+ I +
Sbjct: 213 APARARNRRVTIFV 226
>gi|323697842|ref|ZP_08109754.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323457774|gb|EGB13639.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 250
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 6/145 (4%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPS 108
+ + + VS + + + F V L + LQ++ + +
Sbjct: 106 LKKAIRSKDLTHMAKVSSDKSGVMLRLSSQLLFDKGSVELTAEAKQALQMVIDSMKQT-D 164
Query: 109 TVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I+ HTD +N +S RA Y+I+ + G+ P+
Sbjct: 165 FNLVIRGHTDGETPESVQYGSNWSLSAARAASCLRYIIEHSDIPATRMKAVGYGGSKPLL 224
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNIK 189
++ RQ N+R+E P G K
Sbjct: 225 PGTSEENRQANRRVEFFYMPPGRSK 249
>gi|313681893|ref|YP_004059631.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994]
gi|313154753|gb|ADR33431.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994]
Length = 177
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 60/184 (32%), Gaps = 10/184 (5%)
Query: 1 MIKELGL--SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M+K++ + M +SGC ++ N +S+ +
Sbjct: 1 MMKKVAFLSATVAMLVLSGCSSKEPAIDASANANASAGTKANGSDANSVISPVSNANVTD 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + + + + + + A ++ I ++ + D
Sbjct: 61 ANGANGANGSDGGLV----SILFDYDKFDIRADMQDAMAKNALLVK---GKTIKLEGNCD 113
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ + N + +RA+ + + S I++ P+ +K Q N+R+
Sbjct: 114 EFGSDEYNFALGLKRANSV-KAALVNSGISADSIAMSSLGESNPVCLEKSKDCWQKNRRV 172
Query: 179 EIQI 182
+ ++
Sbjct: 173 DFKL 176
>gi|317153382|ref|YP_004121430.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943633|gb|ADU62684.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 254
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 6/146 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFP 107
+ +D + + + VS + F L + P L+++ + +
Sbjct: 109 RLKDFIRARDLTSMARVSSDKSGVMLRFNNSAMFQRGSAELSPQAKPALEVVIAGM-ENK 167
Query: 108 STVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + I HTDS +N +S RA Y++ S + G+A PI
Sbjct: 168 NFNLVINGHTDSETPESDLYTSNWELSAARAATCLRYILTHSDISANRMKAVGYAGAKPI 227
Query: 164 DTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ ++ RQ N+R+E P G K
Sbjct: 228 VPSTSEENRQINRRVEFFYMPVGRSK 253
>gi|225011622|ref|ZP_03702060.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
gi|225004125|gb|EEG42097.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
Length = 468
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 14/165 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V D V + K +E + + G +
Sbjct: 312 GCPWPDADNDGVADKDDLCKDEVGSISNNGCPKLSNEVMKTINEFGAKI----------- 360
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + S+ L KK +L I IL + P + I+ + + G+ + N+ +S +RA+
Sbjct: 361 --NFAASSDKILGKKMFDILYKIKDILIENPVGNLLIEGYASADGSEEYNIELSVKRAEA 418
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ + + + + VRG P+ N++ GR N+R++
Sbjct: 419 VRD-FLNKIGINIERLEVRGLGVNSPVGNNESPEGRAENRRVQFI 462
>gi|254463781|ref|ZP_05077192.1| OmpA domain protein [Rhodobacterales bacterium Y4I]
gi|206684689|gb|EDZ45171.1| OmpA domain protein [Rhodobacterales bacterium Y4I]
Length = 310
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ V L + L +A L P + + HTD++G+ + N IS+ RA
Sbjct: 201 LADLVFESGSTRLREGRYDSLVQLAEYLAANPEYRLLLVGHTDTVGSQEQNAGISERRAQ 260
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+K LI+ + I V G + PI +N T GR+ N+R+E +
Sbjct: 261 SVKERLIEAYGAEESQIGVAGAGFLAPIASNLTPEGREANRRVEAVLL 308
>gi|254483240|ref|ZP_05096472.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
gi|214036463|gb|EEB77138.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
Length = 329
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 2/117 (1%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLL 128
++ + L + L L + + + HTD G NL
Sbjct: 213 EVSFDVQSINFEFGSDELAADGIRQLDEFGAALVSPELEQLKLRVAGHTDDQGEESYNLD 272
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+SQ RA + YL + + V G + P+ + + R N+R+E+
Sbjct: 273 LSQRRAKAVALYLESNYEVDSGRLEVVGMGEEKPLVPDASLEARAKNRRVEMVFITE 329
>gi|251771621|gb|EES52197.1| outer membrane protein, OmpA/MotB family [Leptospirillum
ferrodiazotrophum]
Length = 186
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 59/176 (33%), Gaps = 12/176 (6%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L L + + ++GC + K S N + ++
Sbjct: 10 LALVIAGVLGLAGCASSGGANGKGSESASTTNAAANTPATDNSAATDNSAATAAAQAASE 69
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + I + L + +L+ A+IL PS + I H D GT
Sbjct: 70 MDPLKKDIQ-------FGFDKSLLSSEDRGILKKDASILKAHPSVKVVIAGHADERGTDA 122
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY-P---IDTNDTKVGRQNNQ 176
N+++ Q+RA + R S + I + + + P + ++ + N+
Sbjct: 123 YNIVLGQKRAK-AARIYLIRLGVSAKRIKIVSYGKREIPNYSVCSDHNESCWSKNR 177
>gi|163803132|ref|ZP_02197015.1| putative outer membrane protein OmpA [Vibrio sp. AND4]
gi|159173032|gb|EDP57865.1| putative outer membrane protein OmpA [Vibrio sp. AND4]
Length = 320
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ ++ +T + + + L+ ++N +P +
Sbjct: 181 EPVVQEVVETRPATNIVDQEYPAQTTTVQFGLESAKLQDAS--AFNGTVELMNTYPQAQV 238
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I ++D+ G N ++++RA + + G++++R +V+G P+ +N+T+ G
Sbjct: 239 EINGYSDTTGAAAYNQQLTEKRAQAVAEHFQAEGIAADRM-TVKGMGEANPVASNETRKG 297
Query: 172 RQNNQRIEIQI 182
R+ N+R+E+ +
Sbjct: 298 REQNRRVEVVV 308
>gi|120436709|ref|YP_862395.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
gi|117578859|emb|CAL67328.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
Length = 536
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 9/147 (6%)
Query: 44 GSSLDKAEDEFQ-MQLQDTGIVVSRIGDMI--TCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ + + E+ + + I +R+GD + + + + + +E K L IA
Sbjct: 378 AAEVKRKENFIRFQNDKGDKIFAARVGDDLAKMLDLDPILFDLDKAEIESKAARQLDHIA 437
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ ++P +I I+SHTDS K N+ +SQ R + + IS RG+
Sbjct: 438 AYMQEYPELLIDIRSHTDSRADDKYNIKLSQNRVA-VTRQYLVNMGVDGNRISGRGYGET 496
Query: 161 YPIDTNDT-----KVGRQNNQRIEIQI 182
++ + N+R E +
Sbjct: 497 ELVNNCRNKIPCPEDAHAINRRSEFIL 523
>gi|119775220|ref|YP_927960.1| peptidoglycan-associated lipoprotein [Shewanella amazonensis SB2B]
gi|119767720|gb|ABM00291.1| peptidoglycan-associated lipoprotein [Shewanella amazonensis SB2B]
Length = 178
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 58/178 (32%), Gaps = 8/178 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + + +S C ++ + GSS+ E +
Sbjct: 8 KTMLIVAPIMALSACSSTDS------ATDASGSSSSLGGSGSSMGGVETGSVSGMLTPEE 61
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + + V + +L L + PS I I+ H+D GT
Sbjct: 62 QMRMKQEELR-RENVIYFDFDRSEVSPLSADILLAHGNYLLENPSVRILIEGHSDERGTP 120
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ + + RA + +Q +S+ + + P D T G N+R +
Sbjct: 121 EYNIALGERRAKAVAK-YLQAMGVQPAQMSIVSYGEEKPQDLTRTDEGFSKNRRAVLV 177
>gi|99082204|ref|YP_614358.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99038484|gb|ABF65096.1| OmpA/MotB [Ruegeria sp. TM1040]
Length = 167
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 68/185 (36%), Gaps = 23/185 (12%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + +S C + + + G D + + + +
Sbjct: 5 KTAILLVAGLALSACSDTRWDD-----TSAGNGGSGIGVDGGLGDPSSPAYFREAVGDRV 59
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ V + + + +L A L P+ V+ I+ H D GT
Sbjct: 60 ----------------LFLVDQSSISPEAQVILDGQARWLQANPAYVVTIEGHADERGTR 103
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ NL + RA+ + YLI +GV+++R +V F + PI+ + + N+R + +
Sbjct: 104 EYNLALGASRANSARDYLISKGVAASRIQTVS-FGKERPIEICSEQSCYEKNRRA-VTVL 161
Query: 184 PRGNI 188
G +
Sbjct: 162 AGGAL 166
>gi|119356691|ref|YP_911335.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
DSM 266]
gi|119354040|gb|ABL64911.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 152
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + L + L+ A + + ++ + I+ H D GT + NL + + RA+
Sbjct: 46 LGDVFYDYDKSELRMDAVEQLKTNAAWMQRNAASSVVIEGHCDERGTNEYNLALGERRAN 105
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
K Y++ GV R +V + + P + N+R
Sbjct: 106 SAKDYIVNLGVDGARMKTVS-YGEERPFALGHDEASWAQNRRAHFV 150
>gi|316932667|ref|YP_004107649.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris
DX-1]
gi|315600381|gb|ADU42916.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris
DX-1]
Length = 165
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 59/183 (32%), Gaps = 30/183 (16%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ + + ++ C + T + F
Sbjct: 12 KVAAVLAVALSMGACANKNGLGGADGAMAGAATPGSQQDF-------------------- 51
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V +GD + + L + L L + I+ H D GT
Sbjct: 52 -VVNVGDRV-------FFESDQSDLSPQAAATLDKQVQWLQTYARYTFTIEGHADERGTR 103
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N+ + RA +++YL+ RG+ ++R ++ + + P+ + N+R + +
Sbjct: 104 EYNIALGARRAQSVRNYLVSRGIDASRMRTIS-YGKERPVAVCNDISCWSQNRRA-VTVL 161
Query: 184 PRG 186
G
Sbjct: 162 NAG 164
>gi|303325524|ref|ZP_07355967.1| OmpA family protein [Desulfovibrio sp. 3_1_syn3]
gi|302863440|gb|EFL86371.1| OmpA family protein [Desulfovibrio sp. 3_1_syn3]
Length = 332
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 8/131 (6%)
Query: 56 MQLQDTGIVVSRI------GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+L + V R D + + L+ K + +L A+++ P+
Sbjct: 201 EELATSDAAVERFVLSVFCQDEDVIVLRGVHFAFNSYALDGKAMGILNEAASLIKANPNK 260
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ + TD IGT N ++SQ RA+ +K+ +++ ++ G + N T+
Sbjct: 261 RVILNGWTDWIGTDAYNKVLSQNRANAVKN-YLEKQGIPASRMTAIGRGKSF-KYDNKTE 318
Query: 170 VGRQNNQRIEI 180
GR N+R EI
Sbjct: 319 EGRYMNRRTEI 329
>gi|86132374|ref|ZP_01050968.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85816935|gb|EAQ38119.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 650
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 10/162 (6%)
Query: 32 KSNDTDIVNKRFGSSLD---KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFL 88
+ +T + + D ++ ++ L I V I + +
Sbjct: 491 GAKETYSGAEAITKTPDVSGTVTNDLELSLLQKPIKVGDDLAKI-LELNPIYFDFDRFNI 549
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
L+ + ++ ++P+ VI ++SHTDS G NL +S +RA +Y+I S
Sbjct: 550 RPDAALELEKVLAVMREYPNMVIDVRSHTDSRGNDSYNLSLSDKRAKSTVNYIIAE-GIS 608
Query: 149 NRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
+ IS RG+ + ++ Q N+R E +
Sbjct: 609 SSRISGRGYGETQLTNECSNGVQCSEEAHQLNRRSEFIVISN 650
>gi|110639014|ref|YP_679223.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC
33406]
gi|110281695|gb|ABG59881.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC
33406]
Length = 323
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 51/136 (37%), Gaps = 8/136 (5%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+D + + + + + F ++ K + L+ +A +L + I ++ HT
Sbjct: 179 KDKDLTIQVKDGKVYVSLAEQLLFKSGSTDVDPKGVEALKKLAAVLKEQQDITIMVEGHT 238
Query: 118 DSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
D + K +N +S RA I ++ + G P+ T T
Sbjct: 239 DDVPVSKGTNGIKDNWDLSVLRATSITR-ILTGAGVDPIHVVPAGHGEFIPVATAKTAEA 297
Query: 172 RQNNQRIEIQIFPRGN 187
R N+R EI + P N
Sbjct: 298 RSQNRRTEIILTPNLN 313
>gi|30314420|gb|AAP15419.1| outer membrane lipoprotein precursor [Burkholderia multivorans]
Length = 149
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Query: 61 TGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + D ++ ++ P+LQ A L P + IQ +TD
Sbjct: 26 AQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDE 85
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + Q+RA+ ++ L GV+ ++ +V + P T + N+R +
Sbjct: 86 RGTSEYNLALGQKRAEAVRRALALLGVADSQMEAVS-LGKEKPQATGHDEASWAQNRRAD 144
Query: 180 IQ 181
+
Sbjct: 145 LV 146
>gi|85375559|ref|YP_459621.1| outer membrane protein [Erythrobacter litoralis HTCC2594]
gi|84788642|gb|ABC64824.1| outer membrane protein [Erythrobacter litoralis HTCC2594]
Length = 197
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 69/186 (37%), Gaps = 21/186 (11%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ +S C + G S ++ + +++ +++
Sbjct: 7 ILLTAALLSACQSEPAPDDVPDPDGE-------EVIGPSPEEPVSIIRPDIEEA-VLIPL 58
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
T S L + + L+ + I I H+D+ G N+
Sbjct: 59 EPLNTTIS-----FADSGTDLTPEAVAELETLVESRQVTEGGPITIGGHSDAGGNDAVNM 113
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND------TKVGRQNNQRIEIQ 181
+S RA+ ++ +L+ RGV R I+V F + P++ N + GR N+R+EI+
Sbjct: 114 RVSLRRAEAVRDWLVARGVDEGR-ITVIAFGEQNPVEPNALPDGQPNEDGRAANRRVEIR 172
Query: 182 I-FPRG 186
+ P G
Sbjct: 173 VDVPEG 178
>gi|146338272|ref|YP_001203320.1| Outer membrane lipoprotein omp16 [Bradyrhizobium sp. ORS278]
gi|146191078|emb|CAL75083.1| Outer membrane lipoprotein omp16 precursor
(peptidoglycan-associated lipoprotein) [Bradyrhizobium
sp. ORS278]
Length = 149
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 45/111 (40%), Gaps = 1/111 (0%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
D + + L + + L+ A L +P I+ H D GT + N
Sbjct: 31 SQQDFVVNVGDRVFFESDQTDLTPQAIATLEKQAQWLQSYPRYSFTIEGHADERGTREYN 90
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ + RA ++++L+ RG+ +R ++ + + P+ + N+R
Sbjct: 91 IALGARRAQSVRNFLVSRGIDQSRMRTIS-YGKERPVAVCNDISCWSQNRR 140
>gi|254254565|ref|ZP_04947882.1| OmpA domain protein [Burkholderia dolosa AUO158]
gi|124899210|gb|EAY71053.1| OmpA domain protein [Burkholderia dolosa AUO158]
Length = 226
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L L + + + + + I +TDS+G+ +N+ +S+ RA +
Sbjct: 121 DALFATGAATLTPAARASLDKLLSARDDRTYSNVTITGYTDSVGSDASNVALSKRRAQAV 180
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + R ++V G P+ +N T GR +N+R+EI +
Sbjct: 181 AA-YLNAHGLKTRTLTVTGRGSADPVASNATADGRASNRRVEISL 224
>gi|314955058|gb|EFS99464.1| OmpA family protein [Propionibacterium acnes HL027PA1]
Length = 368
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 56/147 (38%), Gaps = 3/147 (2%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D+ ++ + V++ I + + ++ ++
Sbjct: 221 DLAGVDVSKFVNALVTTTGDASDASRERVTKESMKIDLDA-SVLFDLDSDVVKPAGRQII 279
Query: 97 QLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
A L S I + +TDS G+ +NL +S+ RA + L + ++
Sbjct: 280 DRTAKQLVARKVSGKIEVTGYTDSSGSASHNLDLSRRRAASVAKVLGSQLSKGITLVTA- 338
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ +ND++ GR+ N+R+ I +
Sbjct: 339 GKGEADPVTSNDSEAGRRLNRRVTITV 365
>gi|254464778|ref|ZP_05078189.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
gi|206685686|gb|EDZ46168.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
Length = 613
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 55/171 (32%), Gaps = 14/171 (8%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
K ++ + + + L T V GD +
Sbjct: 445 KRLEAEAEALASKAQDLERYRSEFFGRLRD-LLGTQEGVRIQGDRFVF-ASEVLFAPGSA 502
Query: 87 FLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDS-----IGTLKNNLLISQERA 134
L + + +IL S +I + HTD +N +SQ RA
Sbjct: 503 TLSPAGKVEIAKVVSILQSVVAAIPPEISWIIRVDGHTDDTPLVAHPKFNDNWELSQGRA 562
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ Y+++ ++ GF P+++ T R N+RIE++ +
Sbjct: 563 LSVVRYMVEALGVPPSRLAANGFGEYQPVNSAGTPEARAQNRRIELKFTEK 613
>gi|84684107|ref|ZP_01012009.1| OmpA/MotB domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84667860|gb|EAQ14328.1| OmpA/MotB domain protein [Rhodobacterales bacterium HTCC2654]
Length = 481
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 55/157 (35%), Gaps = 11/157 (7%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
V G L + E Q + + G I
Sbjct: 330 VTRTNRATGADQVASAGYWLPVYDFEISKQACNDAAAQVQAGRQIQ-------FVTGSAE 382
Query: 88 LEKKFLPMLQLIATILNKFPS---TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L+ + ++ +A +L + I HTDS G N +S RA+ ++ L+ R
Sbjct: 383 LDTASMSIINDMAGLLLHCTDKIGMRVTIGGHTDSQGDDNENYRLSVARANAVRDALVAR 442
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
GV + R GF PI NDT+ GR N+R +
Sbjct: 443 GVPAGRM-QALGFGETEPIADNDTEEGRAANRRTTFE 478
>gi|332668116|ref|YP_004450904.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332336930|gb|AEE54031.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 662
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 55/154 (35%), Gaps = 10/154 (6%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
N K E F++++ I + + + + + +
Sbjct: 514 NSAKFSTKGIAKDPKNPEQIFEIEIVLDKIYLDKE-----IRLENIYYDLDKWDIRADAQ 568
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
P L +A L P I + SHTD GT N +SQ+RA YLI + + +
Sbjct: 569 PTLDKLAETLKLNPKVRIQLSSHTDCRGTDVYNESLSQKRAQSAVDYLISK-GIEAQRLE 627
Query: 154 VRGFAYKYPIDTND----TKVGRQNNQRIEIQIF 183
RG+ P T ++ Q N+R ++
Sbjct: 628 ARGYGEGVPEATCACARCSEDEHQLNRRTAFRVV 661
>gi|84500108|ref|ZP_00998374.1| flagellar motor protein [Oceanicola batsensis HTCC2597]
gi|84392042|gb|EAQ04310.1| flagellar motor protein [Oceanicola batsensis HTCC2597]
Length = 852
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 65/185 (35%), Gaps = 14/185 (7%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
++ R ++++ + + +R + + + V +GD
Sbjct: 670 AALAQKAAEERRRRQLEEAERRRLEAEAERLQKYRSEFFGQLRDVFAGQE-GVKIVGDRF 728
Query: 73 TCYIPVHVSFVSEVFLEKKFL-------PMLQLIATILNKFPSTVIAIQSHTDS-----I 120
+ + L + L+ +A + + V+ + HTD
Sbjct: 729 VFS-SEVLFDPGQADLSEGGQRQIAGIAATLRSLADEIPEGIDWVLRVDGHTDDVPLSGQ 787
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G ++N +SQ RA + Y+ ++ GF PI + D++ R N+RIE+
Sbjct: 788 GEFQDNWELSQARALSVVRYMEDFLGFPPDRLAANGFGEHQPIASGDSEAARAANRRIEL 847
Query: 181 QIFPR 185
+ R
Sbjct: 848 KFTER 852
>gi|119383439|ref|YP_914495.1| OmpA domain-containing protein [Paracoccus denitrificans PD1222]
gi|119373206|gb|ABL68799.1| OmpA domain protein [Paracoccus denitrificans PD1222]
Length = 173
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 68/190 (35%), Gaps = 22/190 (11%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
++K ++ + ++ C + + + + + +
Sbjct: 4 IMKTFMKIAAVGAILALAACA------------RPAQDMQIQDPYAGAGGASGVGASVLP 51
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ +GD + + + + L + +L A LN+ I+ H D
Sbjct: 52 GSAEYFKASVGDTV-------LFPLDQSTLTPEARVILANQAGWLNQNAGFAAVIEGHAD 104
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + NL + RA+ ++ YLI +G++ R +V + + P+ T+ N+R
Sbjct: 105 EQGTREYNLALGARRANSVQEYLISQGIAPGRLRTVS-YGKERPLAICSTEECFTKNRRA 163
Query: 179 EIQIFPRGNI 188
+ P +
Sbjct: 164 VTVVSPGAGM 173
>gi|27378711|ref|NP_770240.1| hypothetical protein blr3600 [Bradyrhizobium japonicum USDA 110]
gi|27351860|dbj|BAC48865.1| blr3600 [Bradyrhizobium japonicum USDA 110]
Length = 508
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 7/143 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ L + + + + + I + + + + + F P+ +A L
Sbjct: 364 TQLQRIRNALAKENTACAMTADQTPSFIVIRVCDLALFASGQATILDGFKPIALRVAATL 423
Query: 104 NKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+K P I + HTDS N +S ERA + + L +R + V G
Sbjct: 424 DKEPG-RIRVVGHTDSSPIRTVRFPTNFELSVERAKAVAAALKPGLTDGSR-VDVEGKGA 481
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
PI +N T GR N+R+EI I
Sbjct: 482 DAPIASNTTPEGRAKNRRVEIFI 504
>gi|153837220|ref|ZP_01989887.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810]
gi|260366108|ref|ZP_05778568.1| flagellar motor protein [Vibrio parahaemolyticus K5030]
gi|260879749|ref|ZP_05892104.1| flagellar motor protein [Vibrio parahaemolyticus AN-5034]
gi|260896795|ref|ZP_05905291.1| flagellar motor protein [Vibrio parahaemolyticus Peru-466]
gi|260903584|ref|ZP_05911979.1| flagellar motor protein [Vibrio parahaemolyticus AQ4037]
gi|149749483|gb|EDM60237.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810]
gi|308087342|gb|EFO37037.1| flagellar motor protein [Vibrio parahaemolyticus Peru-466]
gi|308092264|gb|EFO41959.1| flagellar motor protein [Vibrio parahaemolyticus AN-5034]
gi|308109501|gb|EFO47041.1| flagellar motor protein [Vibrio parahaemolyticus AQ4037]
gi|308114754|gb|EFO52294.1| flagellar motor protein [Vibrio parahaemolyticus K5030]
Length = 430
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 7/158 (4%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLE 89
+ +V + ++ ++ + V + D + + + +
Sbjct: 272 TPAVSNPMVESKSAPIAERISMYLATEIGKDLVTVEALQDRVRISLKAQDLFESGSASVV 331
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRG 145
P++ +A L I I HTD +N +S RA + LI
Sbjct: 332 AYIQPVISKVARTLEATQG-KIIITGHTDDRPIFTSKYPSNWHLSLARATSLSEQLISNS 390
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R I G P+ ND++ R N+RIEI +
Sbjct: 391 ALKGRVI-PEGLGDARPLVENDSEKNRAMNRRIEIDLI 427
>gi|238750197|ref|ZP_04611700.1| Type VI secretion system OmpA/MotB family protein [Yersinia rohdei
ATCC 43380]
gi|238711741|gb|EEQ03956.1| Type VI secretion system OmpA/MotB family protein [Yersinia rohdei
ATCC 43380]
Length = 457
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 66/188 (35%), Gaps = 15/188 (7%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHK--SNDTDIVNKRFGSSLDKAEDEFQ------MQLQ 59
+ I+ +AS+ V T + E + + ++
Sbjct: 270 MLLCGFLIAATFIASKYFLSVPESDLLKRMTVLQRPVIAQRPAVVEQKLRLAVLLKDEIA 329
Query: 60 DTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ V F + + + ++ +A +++ + I HTD
Sbjct: 330 KQLVSVDETTSQSKVIFKGDTMFQVGSDKVRPEIINVIDRVAQEVHRVQGA-VLIVGHTD 388
Query: 119 SIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
S+ K N ++S++RA + ++L+++ I G P+ +N GR
Sbjct: 389 SMPINKPGFPNNQVLSEKRAANV-AHLMEKAGIPTDKIRFEGKGDIQPVGSNGDAAGRAQ 447
Query: 175 NQRIEIQI 182
N+R+EI +
Sbjct: 448 NRRVEIFV 455
>gi|170702768|ref|ZP_02893624.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170132317|gb|EDT00789.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 222
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 71/221 (32%), Gaps = 41/221 (18%)
Query: 2 IKELGLSMFIM-TTISGCGLASR--------EKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
+ +L L++ + ++ C AS + + D + + + A
Sbjct: 1 MNKLALALALSTMALAACSTASGPTFSASELQPRDGVRTFQVDCHGLLSGPQTCMKAARK 60
Query: 53 EFQMQLQDTGIVVSRIGDMI------------------------------TCYIPVHVSF 82
Q T + D + F
Sbjct: 61 ICGDQPVRTIDSARALRDGSDPATLVFQCGAAPAEAASAAEPAPAPAAVEHVNLAGDALF 120
Query: 83 VSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ L L + + T + + HTDS+G NL +S+ RA+ + +
Sbjct: 121 ATGLATLTPAARASLDKLLSEREDRTYTQVTVTGHTDSVGNDAANLALSKRRAETV-AGY 179
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ + +SV G P+ +N T GR +N+R++I +
Sbjct: 180 LKAHGLKAQTVSVSGRGSADPVASNATAEGRASNRRVDISL 220
>gi|269962960|ref|ZP_06177298.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832322|gb|EEZ86443.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 430
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 53/161 (32%), Gaps = 7/161 (4%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEV 86
+ + T + + ++ ++ + V + D + I +
Sbjct: 269 IAPVQVESTVQTDSQVTDIAERISMYLATEISKGLVTVDALPDRVRISIKAQDLFESGSA 328
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLI 142
+ + P++ +A L I + HTD +N +S RA + LI
Sbjct: 329 EVVEYIQPVISKLARTLEATEG-KILVAGHTDDKPIFTSKYPSNWHLSLARATAMSEQLI 387
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R + G P+ N + R N+RIEI +
Sbjct: 388 ANSALKGRVL-PEGLGDARPLVDNTSDENRALNRRIEIDLM 427
>gi|332669626|ref|YP_004452634.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332338664|gb|AEE45247.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484]
Length = 517
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 58/170 (34%), Gaps = 1/170 (0%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + + + + E ++ + + + +T +
Sbjct: 171 ADVPVVPADDAGVLTVPPEELAEGGVADAPVVPLEAYTEVVGGTVRARQTPEAVTVQVAS 230
Query: 79 HVSFVSEVFL-EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V F + L + L A + +P + + HTD + NL +SQ RA +
Sbjct: 231 DVLFAVDSDLLGPEAEAALAAAAAQVTAYPGGTLTVVGHTDDVADDAYNLDLSQRRAATV 290
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ L Q S ++V P + R N+R+EI + P+G
Sbjct: 291 AARLAQVADLSGFDVTVDAKGESQPAVAGTSPDARALNRRVEIVLVPQGE 340
>gi|148827586|ref|YP_001292339.1| hypothetical protein CGSHiGG_05065 [Haemophilus influenzae PittGG]
gi|148718828|gb|ABQ99955.1| hypothetical protein CGSHiGG_05065 [Haemophilus influenzae PittGG]
Length = 153
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 63/179 (35%), Gaps = 33/179 (18%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + L + ++ C ++ + + + G S+ +
Sbjct: 1 MNKFVKSLLVAGSVAALAACSSSNND--------AAGNGVAQTFGGYSVADLQQ------ 46
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + +++ +L A LN P+ + ++ +TD
Sbjct: 47 ----------------RYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTD 90
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RAD +K YL +GV + + +V + + P + N+R
Sbjct: 91 ERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 148
>gi|111223898|ref|YP_714692.1| hypothetical protein FRAAL4505 [Frankia alni ACN14a]
gi|111151430|emb|CAJ63147.1| hypothetical protein; putative signal peptide; putative OmpA/MotB
domain [Frankia alni ACN14a]
Length = 384
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 41/114 (35%), Gaps = 2/114 (1%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
P VS L L +A +L + + +TD+ G N +S
Sbjct: 271 RAALDGPAVTFPVSGARLSPSAQARLDSVAAVLRG-GDLAVLVGGYTDTSGPSALNQALS 329
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA YL R + GF + P+ N T GR N+RIEI P
Sbjct: 330 LNRAQAAADYLTSR-GVPADLVRAAGFGSREPVAGNGTPQGRAANRRIEIIPLP 382
>gi|88802743|ref|ZP_01118270.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P]
gi|88781601|gb|EAR12779.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P]
Length = 289
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 66/169 (39%), Gaps = 6/169 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ D +N +L K+ D +++ I ++ ++ + +
Sbjct: 106 TKVDVNALSKAKTLKDSLNLAIAYNLKKSIDILEIE-SSDDIDINIDQTVVMISVSDKLL 164
Query: 82 FVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADV 136
F + ++K ++ +A ++ PS + I+ HTDS ++N +S +RA
Sbjct: 165 FNTASYRVKKGAYKLIAKLAAVIKSEPSMDVMIEGHTDSRTISNAVVQDNWDLSVKRATS 224
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
I L + + G P+ N + R+ N+R +I I P
Sbjct: 225 IVRLLESKYKVEGSRLIASGRGSTMPLVDNSSSENRRKNRRTKIVILPN 273
>gi|332292401|ref|YP_004431010.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332170487|gb|AEE19742.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 652
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ G ++ + + +++ ++ L I T+L++ PS I I+SHTD+
Sbjct: 527 IVEDGGLLKIKVGIIFFDLNKDYIRPDAAMELNKIVTLLSQQPSIEIRIESHTDARADDN 586
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-----KVGRQNNQRIE 179
N+ +SQ RA K+YLI++G++ R +S +GF ++ +V Q N+R E
Sbjct: 587 YNMELSQRRAISTKNYLIRQGIAKERILSAQGFGETQLLNDCSNGVQCDEVQHQINRRSE 646
Query: 180 IQI 182
I
Sbjct: 647 FII 649
>gi|50841753|ref|YP_054980.1| putative outer membrane protein A [Propionibacterium acnes
KPA171202]
gi|289424480|ref|ZP_06426263.1| OmpA family protein [Propionibacterium acnes SK187]
gi|289428850|ref|ZP_06430530.1| OmpA family protein [Propionibacterium acnes J165]
gi|295129833|ref|YP_003580496.1| OmpA family protein [Propionibacterium acnes SK137]
gi|50839355|gb|AAT82022.1| putative outer membrane protein A [Propionibacterium acnes
KPA171202]
gi|289155177|gb|EFD03859.1| OmpA family protein [Propionibacterium acnes SK187]
gi|289157851|gb|EFD06074.1| OmpA family protein [Propionibacterium acnes J165]
gi|291376750|gb|ADE00605.1| OmpA family protein [Propionibacterium acnes SK137]
gi|313765278|gb|EFS36642.1| OmpA family protein [Propionibacterium acnes HL013PA1]
gi|313772807|gb|EFS38773.1| OmpA family protein [Propionibacterium acnes HL074PA1]
gi|313793172|gb|EFS41239.1| OmpA family protein [Propionibacterium acnes HL110PA1]
gi|313806398|gb|EFS44905.1| OmpA family protein [Propionibacterium acnes HL087PA2]
gi|313810947|gb|EFS48661.1| OmpA family protein [Propionibacterium acnes HL083PA1]
gi|313814554|gb|EFS52268.1| OmpA family protein [Propionibacterium acnes HL025PA1]
gi|313815353|gb|EFS53067.1| OmpA family protein [Propionibacterium acnes HL059PA1]
gi|313817476|gb|EFS55190.1| OmpA family protein [Propionibacterium acnes HL046PA2]
gi|313821987|gb|EFS59701.1| OmpA family protein [Propionibacterium acnes HL036PA1]
gi|313824117|gb|EFS61831.1| OmpA family protein [Propionibacterium acnes HL036PA2]
gi|313826484|gb|EFS64198.1| OmpA family protein [Propionibacterium acnes HL063PA1]
gi|313831713|gb|EFS69427.1| OmpA family protein [Propionibacterium acnes HL007PA1]
gi|313834406|gb|EFS72120.1| OmpA family protein [Propionibacterium acnes HL056PA1]
gi|313840403|gb|EFS78117.1| OmpA family protein [Propionibacterium acnes HL086PA1]
gi|314917220|gb|EFS81051.1| OmpA family protein [Propionibacterium acnes HL050PA1]
gi|314921721|gb|EFS85552.1| OmpA family protein [Propionibacterium acnes HL050PA3]
gi|314926563|gb|EFS90394.1| OmpA family protein [Propionibacterium acnes HL036PA3]
gi|314931072|gb|EFS94903.1| OmpA family protein [Propionibacterium acnes HL067PA1]
gi|314959098|gb|EFT03200.1| OmpA family protein [Propionibacterium acnes HL002PA1]
gi|314961372|gb|EFT05473.1| OmpA family protein [Propionibacterium acnes HL002PA2]
gi|314964584|gb|EFT08684.1| OmpA family protein [Propionibacterium acnes HL082PA1]
gi|314969683|gb|EFT13781.1| OmpA family protein [Propionibacterium acnes HL037PA1]
gi|314974747|gb|EFT18842.1| OmpA family protein [Propionibacterium acnes HL053PA1]
gi|314977055|gb|EFT21150.1| OmpA family protein [Propionibacterium acnes HL045PA1]
gi|314980286|gb|EFT24380.1| OmpA family protein [Propionibacterium acnes HL072PA2]
gi|314985460|gb|EFT29552.1| OmpA family protein [Propionibacterium acnes HL005PA1]
gi|314987369|gb|EFT31460.1| OmpA family protein [Propionibacterium acnes HL005PA2]
gi|314989090|gb|EFT33181.1| OmpA family protein [Propionibacterium acnes HL005PA3]
gi|315082724|gb|EFT54700.1| OmpA family protein [Propionibacterium acnes HL027PA2]
gi|315086083|gb|EFT58059.1| OmpA family protein [Propionibacterium acnes HL002PA3]
gi|315087668|gb|EFT59644.1| OmpA family protein [Propionibacterium acnes HL072PA1]
gi|315097294|gb|EFT69270.1| OmpA family protein [Propionibacterium acnes HL038PA1]
gi|315099483|gb|EFT71459.1| OmpA family protein [Propionibacterium acnes HL059PA2]
gi|315102012|gb|EFT73988.1| OmpA family protein [Propionibacterium acnes HL046PA1]
gi|315106289|gb|EFT78265.1| OmpA family protein [Propionibacterium acnes HL030PA1]
gi|327331336|gb|EGE73075.1| putative outer membrane protein A [Propionibacterium acnes
HL096PA2]
gi|327333322|gb|EGE75042.1| putative outer membrane protein A [Propionibacterium acnes
HL096PA3]
gi|327445201|gb|EGE91855.1| OmpA family protein [Propionibacterium acnes HL013PA2]
gi|327447284|gb|EGE93938.1| OmpA family protein [Propionibacterium acnes HL043PA1]
gi|327450270|gb|EGE96924.1| OmpA family protein [Propionibacterium acnes HL043PA2]
gi|327454535|gb|EGF01190.1| OmpA family protein [Propionibacterium acnes HL087PA3]
gi|327456606|gb|EGF03261.1| OmpA family protein [Propionibacterium acnes HL083PA2]
gi|327457118|gb|EGF03773.1| OmpA family protein [Propionibacterium acnes HL092PA1]
gi|328755590|gb|EGF69206.1| OmpA family protein [Propionibacterium acnes HL087PA1]
gi|328756916|gb|EGF70532.1| OmpA family protein [Propionibacterium acnes HL025PA2]
gi|328758401|gb|EGF72017.1| OmpA family protein [Propionibacterium acnes HL020PA1]
gi|328761148|gb|EGF74692.1| putative outer membrane protein A [Propionibacterium acnes
HL099PA1]
gi|332674672|gb|AEE71488.1| putative outer membrane protein A [Propionibacterium acnes 266]
Length = 368
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 56/147 (38%), Gaps = 3/147 (2%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D+ ++ + V++ I + + ++ ++
Sbjct: 221 DLAGVDVSKFVNALVTTTGDASDASRERVTKESMKIDLDA-SVLFDLDSDVVKPAGRQII 279
Query: 97 QLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
A L S I + +TDS G+ +NL +S+ RA + L + ++
Sbjct: 280 DRTAKQLVARKVSGKIEVTGYTDSSGSASHNLDLSRRRAASVAKVLGSQLSKGITLVTA- 338
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ +ND++ GR+ N+R+ I +
Sbjct: 339 GKGEADPVTSNDSEAGRRLNRRVTITV 365
>gi|315078400|gb|EFT50431.1| OmpA family protein [Propionibacterium acnes HL053PA2]
Length = 368
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 56/147 (38%), Gaps = 3/147 (2%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D+ ++ + V++ I + + ++ ++
Sbjct: 221 DLAGVDVSKFVNALVTTTGDASDASRERVTKESMKIDLDA-SVLFDLDSDVVKPAGRQII 279
Query: 97 QLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
A L S I + +TDS G+ +NL +S+ RA + L + ++
Sbjct: 280 DRTAKQLVARKVSGKIEVTGYTDSSGSASHNLDLSRRRAASVAKGLGSQLSKGITLVTA- 338
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ +ND++ GR+ N+R+ I +
Sbjct: 339 GKGEADPVTSNDSEAGRRLNRRVTITV 365
>gi|310778685|ref|YP_003967018.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
gi|309748008|gb|ADO82670.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
Length = 342
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ V+ + L + I+ +L T + I+ +TDS G K N+++S++RA+ + +
Sbjct: 237 LFSVNSYEVTGAGLAEIDEISQVLEGHKGT-LTIEGNTDSTGAAKYNMMLSEKRAEAVAN 295
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
R I +GF + P+ N T + N+R+E+
Sbjct: 296 VFKARLEGEEIEIVSKGFGEENPLVPNTTPEAKAQNRRVEV 336
>gi|325286203|ref|YP_004261993.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324321657|gb|ADY29122.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 276
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Query: 72 ITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNN 126
+ I + F + + K +LQ +A ++N PS + ++ HTDS + +N
Sbjct: 146 VMISISDKLLFNTASYNVSNKADAILQKLADVINSEPSIEVMVEGHTDSRSISTPKVTDN 205
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S RA I L + + + G + P+ +NDTK R N+R I I P
Sbjct: 206 WDLSVLRATSIVRKLQTKYNVAPEKLIASGRSSYVPLASNDTKEDRAKNRRTRIVILPN 264
Score = 34.6 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 8/99 (8%), Positives = 33/99 (33%), Gaps = 1/99 (1%)
Query: 2 IKELGLSMFIMTTISGC-GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K++ L++ + + C + + ++ L+ + + ++ D
Sbjct: 1 MKKISLALTAVVLLGSCVSKKKYVELQQAHGETKSQLTKTAVEKEELEAKFAKIEARVAD 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
++ + + + V ++ K L+ +
Sbjct: 61 YNSKINALTEDNDAKLISADGAVISNNVKAKMRETLKNV 99
>gi|307300434|ref|ZP_07580214.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
gi|307318299|ref|ZP_07597734.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
gi|306895981|gb|EFN26732.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
gi|306904600|gb|EFN35184.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
Length = 342
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + L + + +AT L + P +
Sbjct: 204 EILSDRENIRIVGDRFVFQ-SEVLFPSGGSDLNPEGQTEMAKLATALLDLAKEIPAEINW 262
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD IG ++N +S RA + +LI +GV ++R ++ GF PI
Sbjct: 263 VLRVDGHTDDVQLSGIGRFRDNWELSSARATSVVKFLISKGVPADRLVAA-GFGEYQPIA 321
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
+++ R N+RIE+++ +
Sbjct: 322 PGESQEARAQNRRIELKLTEK 342
>gi|28900895|ref|NP_800550.1| hypothetical protein VPA1040 [Vibrio parahaemolyticus RIMD 2210633]
gi|28809341|dbj|BAC62383.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
Length = 433
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 7/158 (4%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLE 89
+ +V + ++ ++ + V + D + + + +
Sbjct: 275 TPAVSNPMVESKSAPIAERISMYLATEIGKDLVTVEALQDRVRISLKAQDLFESGSASVV 334
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRG 145
P++ +A L I I HTD +N +S RA + LI
Sbjct: 335 AYIQPVISKVARTLEATQG-KIIITGHTDDRPIFTSKYPSNWHLSLARATSLSEQLISNS 393
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R I G P+ ND++ R N+RIEI +
Sbjct: 394 ALKGRVI-PEGLGDARPLVENDSEKNRAMNRRIEIDLI 430
>gi|262395314|ref|YP_003287167.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
gi|262338908|gb|ACY52702.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
Length = 430
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 54/167 (32%), Gaps = 14/167 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV-HV 80
++ + + +++R ++ I V + D + + +
Sbjct: 270 QPQQLNQDTTSESKSAPISERISMY-------LATEIGKGLINVEPLQDRVRISLKSQDL 322
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADV 136
+ P++ +A L I + HTD +N +S RA
Sbjct: 323 FESGSADVVAYIQPVISKLARTLESTQG-KIIVTGHTDDRPIFTSKYPSNWHLSLARATA 381
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ LI R I G P+ N++ R N+RIEI +
Sbjct: 382 MSEQLISNSTLEGRVI-PEGLGDARPLVENNSDENRAINRRIEIDLL 427
>gi|327399143|ref|YP_004340012.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411]
gi|327181772|gb|AEA33953.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411]
Length = 172
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 74/190 (38%), Gaps = 23/190 (12%)
Query: 1 MIKELGLSMF----IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M ++ L + +SGC + + ++
Sbjct: 1 MKRKGKLVSASLIGVAFLMSGCMCMHK-----------------GVQNAPKKIVVEKPAT 43
Query: 57 QLQDTGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
Q + + I I +++++++ +++ +L IA + K P+ I I+
Sbjct: 44 TTQQAKVDLKTIFTDIHFNFDKYNLTYINKWGIKQNVPAVLDGIAQYMVKHPNVRIRIEG 103
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ D GT++ NL + Q+RA K YL+ +GV+ +R I + + P+D + N
Sbjct: 104 NCDERGTVEYNLALGQKRALAAKKYLVAKGVNPDR-IDIISYGESRPLDPAHNEYAWAKN 162
Query: 176 QRIEIQIFPR 185
+R I +
Sbjct: 163 RRDHFVILSK 172
>gi|325474507|gb|EGC77694.1| OmpA family protein [Treponema denticola F0402]
Length = 1345
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 13/135 (9%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVF-------LEKKFLPMLQLIATILNKFPSTVIAIQS 115
I+V R GD + +P + + + K +L+ IA ILNKFP + ++
Sbjct: 1212 ILVIRDGDKLKIAVPSIIFRANAADFEGLDKAIVDKNKSILKRIAVILNKFPEYQVQVEG 1271
Query: 116 HTDSIGTLKNN-----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
H ++ + L +S++RA+ ++ +LI + + +S G P+ + + +
Sbjct: 1272 HANTTTGTEKEETTALLPLSKQRAEAVRQFLI-KEGVRSSRLSSIGMGSSKPVASLNDRD 1330
Query: 171 GRQNNQRIEIQIFPR 185
N+R+E + +
Sbjct: 1331 NWWKNRRVEFILIKQ 1345
>gi|37679728|ref|NP_934337.1| outer membrane protein [Vibrio vulnificus YJ016]
gi|37198473|dbj|BAC94308.1| outer membrane protein [Vibrio vulnificus YJ016]
Length = 226
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 81/197 (41%), Gaps = 10/197 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L + +T + +AS + + + D + D + + DT
Sbjct: 19 MKAFILPLACLTFAATPVIASDKADEYDYLATPRADQLADLQDQDRDGVINA-RDLCPDT 77
Query: 62 GIVVSRIGDMI------TCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQ 114
D + + + V F ++ + F ++ ++ L +PST I +Q
Sbjct: 78 PSTAEIDNDGCGTYVKTSQQMQIRVLFANDSDKINPVFRKQIKEMSEFLKLYPSTSIELQ 137
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ G ++NL +S+ RA+ ++ LI G++ +R + + GF + +V
Sbjct: 138 GYASRTGNAEHNLDLSKRRANNVREMLIGYGIAQSR-VRIVGFGDSALANEGTDEVSHAL 196
Query: 175 NQRIEIQIFP-RGNIKK 190
N+R+ + +G++K+
Sbjct: 197 NRRVVASVVGYKGDVKE 213
>gi|325579032|ref|ZP_08148988.1| peptidoglycan-associated lipoprotein [Haemophilus parainfluenzae
ATCC 33392]
gi|325159267|gb|EGC71401.1| peptidoglycan-associated lipoprotein [Haemophilus parainfluenzae
ATCC 33392]
Length = 155
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 58/179 (32%), Gaps = 31/179 (17%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + L + ++ C ++ + + +N+ L +
Sbjct: 1 MNKFVKSLLVAGSVAALAACSSSNND---AAGNGANNGQTFGGYSVEDLQQ--------- 48
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ +E +++ +L A LN P++ + ++ +TD
Sbjct: 49 ----------------RYNTVYFGFDKFNIEGEYVQILDAHAAYLNATPASKVVVEGNTD 92
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RAD + + +S + + P + N+R
Sbjct: 93 ERGTPEYNIALGQRRADAV-KGFLAGKGVDAGKVSTVSYGEEKPAVLGHDEAAYSKNRR 150
>gi|332716479|ref|YP_004443945.1| Flagellar motor protein [Agrobacterium sp. H13-3]
gi|325063164|gb|ADY66854.1| Flagellar motor protein [Agrobacterium sp. H13-3]
Length = 343
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + L + ++ +A L + P +
Sbjct: 205 EILSDRENIRIVGDRFVFQ-SEVLFPSGGNDLNPQGQAEMEKLAAALIDLAKEIPTEINW 263
Query: 110 VIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD++ G ++N +S RA + +LI +GV +NR ++ GF PI
Sbjct: 264 VLRVDGHTDNVQLSGSGRFRDNWELSSARATSVVKFLISKGVPANRLVAA-GFGEYQPIA 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
DT RQ N+RIE+++ R
Sbjct: 323 EGDTPEARQQNRRIELKLTER 343
>gi|297620366|ref|YP_003708503.1| Sodium-type flagellar protein motY precursor [Waddlia chondrophila
WSU 86-1044]
gi|297375667|gb|ADI37497.1| Sodium-type flagellar protein motY precursor [Waddlia chondrophila
WSU 86-1044]
Length = 248
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 3/142 (2%)
Query: 48 DKAEDEFQMQLQD-TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF-LPMLQLIATILNK 105
+ E QL R + + ++ K + L+ IA + K
Sbjct: 108 QRIEPGMSKQLPGIEDFTDPRYDVELRTVFQTVYFPYNSGLIKGKGNMDRLRTIAAYMQK 167
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P T + ++ H D G NL + +R++ ++ LI+ GV R +V + + P D+
Sbjct: 168 HPDTYLFVEGHCDERGAEAYNLALGAKRSNSVRELLIKEGVRPERIFTVS-YGKERPADS 226
Query: 166 NDTKVGRQNNQRIEIQIFPRGN 187
+ N+R E +IF +
Sbjct: 227 GHNEESWSKNRRAEFKIFNSDS 248
>gi|145636351|ref|ZP_01792020.1| outer membrane protein P6 precursor [Haemophilus influenzae PittHH]
gi|145270516|gb|EDK10450.1| outer membrane protein P6 precursor [Haemophilus influenzae PittHH]
Length = 153
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 62/179 (34%), Gaps = 33/179 (18%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + L + ++ C ++ + + G S+ +
Sbjct: 1 MNKFVKSLLVTGSVAALAACSSSNND--------AAGNGAAQTFGGYSVADLQQ------ 46
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + +++ +L A LN P+ + ++ +TD
Sbjct: 47 ----------------RYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTD 90
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RAD +K YL +GV + + +V + + P + N+R
Sbjct: 91 ERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 148
>gi|116694470|ref|YP_728681.1| hypothetical protein H16_B0519 [Ralstonia eutropha H16]
gi|113528969|emb|CAJ95316.1| conserved hypothetical protein [Ralstonia eutropha H16]
Length = 215
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 68/197 (34%), Gaps = 18/197 (9%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + + G+ + + ++ + + E L +
Sbjct: 22 LMSVLLGAFVLVLLGVIGVQMELSARLEAEV--KQRQEEAQRRETLEKALAAPLAAGRVT 79
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF---PSTVIAIQSHTDSIG 121
+ I+ + ++ L+ + +L+ +A L+ + ++ + TD
Sbjct: 80 LVNGRIGIS---GNVLFALNSDQLQPEGRDLLKSLAQPLSAYLRSRDEILMVSGFTDDQQ 136
Query: 122 TLK------NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ +N +S +RA + LI G+ S F + P+ N GR N
Sbjct: 137 VREGNRRFADNWELSAQRALTVTRTLIDAGIPPTSVFSAA-FGSQQPVTPNADAEGRAKN 195
Query: 176 QRIEIQIFPR---GNIK 189
+R+EI PR G +K
Sbjct: 196 RRVEISPVPRVTAGTVK 212
>gi|262403880|ref|ZP_06080438.1| outer membrane protein [Vibrio sp. RC586]
gi|262350384|gb|EEY99519.1| outer membrane protein [Vibrio sp. RC586]
Length = 337
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 72 ITCYIPVHVSFVSEVF--LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+T L + + + L P I + HTDS+G+ + NL++
Sbjct: 226 VTLDSSDIHFDFDSSEIILTRSLSKKISQVIKFLFDNPEIKIEVIGHTDSVGSQEYNLVL 285
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S++RA I +I GVS NR I++ G PI TN +GR N+R+EI+
Sbjct: 286 SKQRATSIAQLIIDGGVSINR-INIIGKGEDEPITTNSHAMGRAQNRRVEIK 336
>gi|30314450|gb|AAP15434.1| outer membrane lipoprotein precursor [Burkholderia cepacia]
Length = 150
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 56/165 (33%), Gaps = 19/165 (11%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYI 76
C + K + T + V + D
Sbjct: 1 CKSGVKLDDKANNAGAIGTQPSADNVAQ-----------------VNVDPLNDPNSPLAK 43
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ ++ P++Q A L P + IQ +TD GT + NL + Q+RA+
Sbjct: 44 RSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEA 103
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ + GV+ ++ +V + P T + N+R ++
Sbjct: 104 VRRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147
>gi|30314414|gb|AAP15416.1| outer membrane lipoprotein precursor [Burkholderia multivorans ATCC
BAA-247]
Length = 149
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Query: 61 TGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + D ++ ++ P+LQ A L P + IQ +TD
Sbjct: 26 AQVNVDPLNDPNSPLANRSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDE 85
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + Q+RA+ ++ L GV+ ++ +V + P T + N+R +
Sbjct: 86 RGTSEYNLALGQKRAEAVRRALALLGVADSQMEAVS-LGKEKPQATGHDEASWAQNRRAD 144
Query: 180 IQ 181
+
Sbjct: 145 LV 146
>gi|15966529|ref|NP_386882.1| hypothetical protein SMc03992 [Sinorhizobium meliloti 1021]
gi|15075800|emb|CAC47355.1| Hypothetical protein signal peptide [Sinorhizobium meliloti 1021]
Length = 344
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + L + + +AT L + P +
Sbjct: 206 EILSDRENIRIVGDRFVFQ-SEVLFPSGGSDLNPEGQTEMAKLATALLDLAKEIPAEINW 264
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD IG ++N +S RA + +LI +GV ++R ++ GF PI
Sbjct: 265 VLRVDGHTDDVQLSGIGRFRDNWELSSARATSVVKFLISKGVPADRLVAA-GFGEYQPIA 323
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
+++ R N+RIE+++ +
Sbjct: 324 PGESQEARAQNRRIELKLTEK 344
>gi|86141821|ref|ZP_01060345.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
gi|85831384|gb|EAQ49840.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
Length = 653
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 45/132 (34%), Gaps = 8/132 (6%)
Query: 60 DTGIVVSRIGDMI--TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ I GD + + + L + ++ PS V+ I+SHT
Sbjct: 522 EPRITKINEGDDLADLLKLKPIYFDFDRFNIRPDAAEELTKVLAVMESNPSLVVEIRSHT 581
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGR 172
DS G NL +S +RA I IS GF I+ T+
Sbjct: 582 DSRGNDAYNLSLSDKRAKSTAD-WIVNRGIEPSRISGEGFGETQLINDCGNGADCTEEQH 640
Query: 173 QNNQRIEIQIFP 184
Q N+R E +
Sbjct: 641 QLNRRSEFIVIS 652
>gi|257465020|ref|ZP_05629391.1| outer membrane protein precursor PalA [Actinobacillus minor 202]
gi|257450680|gb|EEV24723.1| outer membrane protein precursor PalA [Actinobacillus minor 202]
Length = 160
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 59/179 (32%), Gaps = 26/179 (14%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K ++ + ++ C ++ + VN + + +
Sbjct: 1 MKKLAKVLMVAAPAFVLAACSSSTDNAAANANGAGVNGADVNGQSFGGISAQD------- 53
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ +E ++ +L A +LN + + H D
Sbjct: 54 -------------LQTRYNTVYFAFDSYAVEGEYRQLLDAHAQLLNATK-ANVTVAGHAD 99
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RA+ +++YL Q+G +S + + P T+ N+R
Sbjct: 100 ERGTPEYNIALGQRRANAVQNYLAQQG---ATNVSTVSYGEEKPAVLGHTEADYAKNRR 155
>gi|319954323|ref|YP_004165590.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319422983|gb|ADV50092.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 639
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 6/129 (4%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ V + + + +L P L + + +FP+ + + SH+D
Sbjct: 509 KGDKSSVIGADLVEILKLKTIFFNTNSSYLNANAYPELDKVVAYMKEFPNARVEVGSHSD 568
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT--ND---TKVGRQ 173
S + + NL +S RA SY++ S I+ G+ ++ ND ++
Sbjct: 569 SRDSDRYNLWLSDRRAKSTVSYIVS-MGISEDRITATGYGETLLVNKCINDAPCSEAEHA 627
Query: 174 NNQRIEIQI 182
N+R E +
Sbjct: 628 LNRRSEFIV 636
>gi|296536906|ref|ZP_06898945.1| peptidoglycan-associated lipoprotein [Roseomonas cervicalis ATCC
49957]
gi|296262766|gb|EFH09352.1| peptidoglycan-associated lipoprotein [Roseomonas cervicalis ATCC
49957]
Length = 130
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 1/125 (0%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L + D++ + L+ A L ++P + ++ H
Sbjct: 6 LAAGSVRPGSQEDLVANVGDRVFFDTDSSSVRGDQRATLERQAAWLAQYPQVQVLMEGHA 65
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q RA+ + L+ +GV+ R IS + P T N+R
Sbjct: 66 DERGTREYNLALGQRRANSARDVLVAQGVAPAR-ISTISYGKDRPAALGSTPDAWAQNRR 124
Query: 178 IEIQI 182
+
Sbjct: 125 AVTVV 129
>gi|260432166|ref|ZP_05786137.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415994|gb|EEX09253.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 299
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +Q G ++S + + V L + L L+A L+ P +A+
Sbjct: 168 VEETVQGAGGLLSDLARDGHVILDDLSFESGAVALGEGPFASLALLAGYLSDNPGVRLAL 227
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
HTD G L+ N+ +S RA +++ LI+ + +G Y P+ +N T GR+
Sbjct: 228 VGHTDDTGDLQANINVSTRRAQAVRARLIEAHGVDPERVEAQGVGYLSPLTSNATPEGRE 287
Query: 174 NNQRIEIQIF 183
N+R+E +
Sbjct: 288 LNRRVEAVLL 297
>gi|146282858|ref|YP_001173011.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501]
gi|145571063|gb|ABP80169.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501]
Length = 244
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 55/179 (30%), Gaps = 9/179 (5%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM--QLQDTGIVVSR 67
++ L S D E I V
Sbjct: 60 AASAMLAAGELGVALPAPAAPIPSIAPVPTPAADAQPDDPQESMPTPPGMALGDDIQVIV 119
Query: 68 IGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN- 125
I+ I + F LE L ++ + L + I ++ HTD++
Sbjct: 120 NEGSISFRISSEILFGSGRAELEDAGLEVIDRLVPTLAAN-AFRIVVEGHTDNLPIQTER 178
Query: 126 ---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N +S RA + +Q +S G+A P+ N + GR +N+R+E+
Sbjct: 179 FPSNWELSASRASSVVR-YLQLAGIEATRLSATGYADTRPLADNADERGRASNRRVELV 236
>gi|126736947|ref|ZP_01752682.1| OmpA family protein [Roseobacter sp. SK209-2-6]
gi|126721532|gb|EBA18235.1| OmpA family protein [Roseobacter sp. SK209-2-6]
Length = 187
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 48/134 (35%), Gaps = 6/134 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D AE + G V R G++ + L+ K
Sbjct: 57 DGAEGYMTPHVTRDGKPVCRRGNICGVMPTDQFFATDRHAINAAGQQRLKE---FFQKAN 113
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I HTDS + + N+ +S+ RA+ + R I VRG+ + P N+
Sbjct: 114 ARAFIISGHTDSRASDEYNMRLSERRANAV---ARVGNSIGARIIEVRGYGERDPRKPNN 170
Query: 168 TKVGRQNNQRIEIQ 181
+ N+R+EI
Sbjct: 171 SAANMAENRRVEII 184
>gi|332290809|ref|YP_004429418.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332168895|gb|AEE18150.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 674
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 5/127 (3%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
V + + + + +L +A L K+ I I SHTDS
Sbjct: 547 NAPQVVEKEGKLFMDVAPIYFDFDLHVVREDSQAVLDRLAAKLTKYKRIKIKISSHTDSR 606
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND----TKVGRQNNQ 176
G N+ +S++RA YL+ +G+ ++R I +G+ P+ T+ Q N+
Sbjct: 607 GPAAYNMPLSEKRAKSTFDYLVSKGIDASR-IQYQGYGDTKPVINCPVGKCTEDDHQLNR 665
Query: 177 RIEIQIF 183
R E +I
Sbjct: 666 RSEFEIT 672
>gi|254510529|ref|ZP_05122596.1| OmpA family protein [Rhodobacteraceae bacterium KLH11]
gi|221534240|gb|EEE37228.1| OmpA family protein [Rhodobacteraceae bacterium KLH11]
Length = 208
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 68/176 (38%), Gaps = 17/176 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+++ +++ + ++GC + ++ FG++ +L
Sbjct: 1 MEKWIIALGLSVAVAGC------------TREAGYELDQGTFGNATLNNIQVLNGELTYG 48
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
I+ R + I L+ +L A + +FP + HTD++G
Sbjct: 49 QILARRFAAEVPTQIN---FAFDSAQLDASAQRILLQQADWIKQFPEVRFRVYGHTDAVG 105
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
T N + Q RA+ ++L Q+G+S +R +V F P+ T + N+R
Sbjct: 106 TSAYNKRLGQRRANAAVAFLTQQGISRSRLEAVVSFGKSRPLV--ATPDRDRRNRR 159
>gi|260774012|ref|ZP_05882927.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
gi|260610973|gb|EEX36177.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
Length = 351
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 4/118 (3%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ ++ + L + + + K I I HTDSIG
Sbjct: 224 EIQQVNYELVSESFYSNFANDSYELISA--NDIDKLIPKIKKSQGM-ITIIGHTDSIGRP 280
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N +S +RA + YLI + + + V G PI N + GR N+R+E+
Sbjct: 281 LYNYQLSYKRAQSVADYLI-KNGIKSDQVVVIGMGEDKPIADNLSYEGRAKNRRVEVI 337
>gi|239994128|ref|ZP_04714652.1| OmpA/MotB [Alteromonas macleodii ATCC 27126]
Length = 398
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 18/174 (10%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+GC + + V K D ++ G V + +
Sbjct: 238 TGCAIKDSDNDGVVDSKDMCPDTPAGV--------------KVDAKGCTV-FDEETVEIT 282
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + ++ P + A + ++PST I+ HT + G+ N+ +S+ RA
Sbjct: 283 LR-VLFDNESAVVKMPKDPEISEFAEFMKQYPSTTAVIEGHTSAPGSEAYNMDLSKRRAA 341
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
K ++ + G+ +D + N+RI + + + +K
Sbjct: 342 NFKEVMVDMYGIEGSRLETIGYGETQLLDNGKNAEAHRVNRRISVTV--KDTVK 393
>gi|27382260|ref|NP_773789.1| peptidoglycan-associated lipoprotein [Bradyrhizobium japonicum USDA
110]
gi|27355431|dbj|BAC52414.1| peptidoglycan-associated lipoprotein [Bradyrhizobium japonicum USDA
110]
Length = 162
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 32/174 (18%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+L + + ++ C + + + +
Sbjct: 12 KLAAVLAVALSMGACANKNSAADAMANAATPGSQQD------------------------ 47
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V +GD + + L + + L+ A L +P I+ H D GT
Sbjct: 48 FVVNVGDRV-------FFESDQTDLTPQAIVTLEKQAQWLQTYPRYSFTIEGHADERGTR 100
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N+ + RA ++S+L RG+ +NR ++ + + P+ + N+R
Sbjct: 101 EYNIALGARRAQSVRSFLASRGIDANRMRTIS-YGKERPVAVCNDISCWSQNRR 153
>gi|83312308|ref|YP_422572.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
gi|82947149|dbj|BAE52013.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
Length = 162
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 63/177 (35%), Gaps = 23/177 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+I+ + ++ ++ C A S+ A L D
Sbjct: 3 LIRNNVAVIALLLLVAACESAP----------------------QSMSVACVGTPPALPD 40
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
T + GD +T + L L L A L +P+ + ++ H D
Sbjct: 41 TRYLPGSPGDFVTNIGDRVFFDTNSSALRSDALATLTRQAVWLRAYPNYQLTVEGHADER 100
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + NL + RA +K +LI +GV+ R + + + + P+ + ++R
Sbjct: 101 GTREYNLGLGDRRAHAVKRFLIAQGVAQAR-LKIISWGKERPVAFGSNDLAWAQSRR 156
>gi|298208372|ref|YP_003716551.1| putative outer membrane protein [Croceibacter atlanticus HTCC2559]
gi|83848293|gb|EAP86163.1| putative outer membrane protein [Croceibacter atlanticus HTCC2559]
Length = 332
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 5/117 (4%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + +F + L+ L + + L K P+ ++I HTD +G ++
Sbjct: 220 ESVTNKTLYSSFAQQNFKPDATLKSYALE----LKSYLQKHPNKRVSIVGHTDFVGEEED 275
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NL I ++RA ++ YLI ++ P N T R N+RIEI++
Sbjct: 276 NLWIGEQRAKLVMKYLIS-IGIDANKMTASSKGESDPKFPNTTDANRAKNRRIEIKV 331
>gi|261417399|ref|YP_003251082.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373855|gb|ACX76600.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327366|gb|ADL26567.1| putative chemotaxis MotB protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 216
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 69/189 (36%), Gaps = 12/189 (6%)
Query: 5 LGLSMFIMTTISGCGLASREKKKV---FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ L + +K + + ++ + + + +
Sbjct: 20 VALVSLFILAFVAMATLKEQKAEDLTRTEEEVLSCQEQMRKIAAERNALLSKSLQTSIEA 79
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDS 119
G+ ++ I + ++ L K+ +++ I+ L + + VI + TD
Sbjct: 80 GL-IALEDGKIQIQA-SFLFPINGANLTKEGEGVIRGISKGLLEALDSTDVIMVSGFTDD 137
Query: 120 IGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
I N +S ERA + L++ G +R + GF P ND++ R+ N
Sbjct: 138 IPFSGSTSYTNWNLSTERAVNVVKMLVKMGFPPDRLFAA-GFGEHRPKYPNDSEEHRRLN 196
Query: 176 QRIEIQIFP 184
+R+EI + P
Sbjct: 197 RRVEIGVTP 205
>gi|56698574|ref|YP_168951.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56680311|gb|AAV96977.1| OmpA domain protein [Ruegeria pomeroyi DSS-3]
Length = 304
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 54/119 (45%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
R+ + L + L +A +L+ + + HTD++G L+ N
Sbjct: 186 RLQTRGRVILSGLEFATGSDALGEGPFDTLAELAQLLSANAELRLVLVGHTDTVGGLEPN 245
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ +S++RA +++ L++ IS G Y PI +N T GR+ N+R+E + +
Sbjct: 246 IELSRKRAGAVRARLVEEYGIPADQISADGVGYLAPIASNLTPEGREANRRVEAVMLSQ 304
>gi|110635499|ref|YP_675707.1| OmpA/MotB [Mesorhizobium sp. BNC1]
gi|110286483|gb|ABG64542.1| OmpA/MotB [Chelativorans sp. BNC1]
Length = 172
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Query: 70 DMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
T I + F + L A LN++PS + ++ H D GT + NL
Sbjct: 55 QEFTVAIGDRIFFDTDSSVIRADAQATLARQAQWLNQYPSYSVTVEGHADERGTREYNLA 114
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ RA + +L+ RGV++NR ++ + + P+ D N+R
Sbjct: 115 LGARRAAAARDFLVSRGVAANRIQTIS-YGKERPVAVCDDISCWSQNRR 162
>gi|126664268|ref|ZP_01735260.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
gi|126623800|gb|EAZ94496.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
Length = 635
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 64/153 (41%), Gaps = 7/153 (4%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPM 95
+ K FG + + E ++L+ + D I + + + + +
Sbjct: 482 ETSEKPFGPVTETGKSEINIELKRNVFPIQVGTDLAKLFNISIIYFDLDKWDIRQDAAED 541
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L+ I +++N++P I I+SHTDS T N L+S RA +++ + + ++ +
Sbjct: 542 LEKIISVMNQYPEMTIDIRSHTDSRQTHAYNELLSDRRAKATLEFMV-KSGINRNRLTAK 600
Query: 156 GFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
G+ ++ ++ Q N+R E +
Sbjct: 601 GYGETQLVNECSDGVLCSEEDHQKNRRSEFIVM 633
>gi|72161966|ref|YP_289623.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Thermobifida fusca YX]
gi|71915698|gb|AAZ55600.1| similar to Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Thermobifida
fusca YX]
Length = 521
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 8/149 (5%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQ 97
N+R E + + V+R G T + V F L + +++
Sbjct: 204 DNRRPDEDAVAVEGWVESFVDSEIASVTRDGTTETISLHSDVMFEFDRADLTPEAEAVVR 263
Query: 98 LIATILNKF--PST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
A L + P I I HTD IGT N +S RA+ +++ L++ + ++ V
Sbjct: 264 RAAETLERNVDPDHPEIIIIGHTDGIGTDAYNDDLSVRRAETVRNLLVEEMGTGYTYV-V 322
Query: 155 RGFAYKYPIDTN---DTKVGRQNNQRIEI 180
G + PI D + R N+R+E
Sbjct: 323 EGRGSREPIAREGGPDDEQARARNRRVEF 351
>gi|237751977|ref|ZP_04582457.1| lipoprotein [Helicobacter winghamensis ATCC BAA-430]
gi|229376544|gb|EEO26635.1| lipoprotein [Helicobacter winghamensis ATCC BAA-430]
Length = 167
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 67/187 (35%), Gaps = 23/187 (12%)
Query: 1 MIKELGLS-MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L LS + ++GC S SS D + + + Q
Sbjct: 1 MKKFLVLSSLAAALLVTGCSQKS-------------------GVDSSADVNQGKNYVGGQ 41
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP--STVIAIQSHT 117
D V + + + + + + A++L + I+ +T
Sbjct: 42 DNFATVEERINYVENQLQNIFFDFDKFVVRADMQNAIDNDASVLTSSAMGPLTVRIEGNT 101
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + N + +RA +K LI +GV ++ + V + P T TK N++
Sbjct: 102 DEWGTDEYNYALGLKRAVAVKEALIAKGVEESKTVLVS-YGESKPTCTAKTKECWAENRK 160
Query: 178 IEIQIFP 184
+ ++ P
Sbjct: 161 VTFKMLP 167
>gi|126664143|ref|ZP_01735136.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
gi|126623857|gb|EAZ94552.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
Length = 621
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 10/139 (7%)
Query: 56 MQLQDTGIVVSRIGDMIT-------CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ ++ +VV + + I + + + L + ++N+ P+
Sbjct: 484 AKAENDQVVVEALLNPIMPIITEKEVILQPIYFEYDKSNITADGAAELNKLIIVMNENPN 543
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND- 167
+I +SHTDS G+ K N+ +S RA YL+ + + IS +GF P
Sbjct: 544 MIIFAKSHTDSRGSDKYNMKLSDRRAKATVQYLLSK-GIAKERISGQGFGESEPKVACKS 602
Query: 168 -TKVGRQNNQRIEIQIFPR 185
T+ N+R E I +
Sbjct: 603 CTEEEHAQNRRSEFLIVKK 621
>gi|116249130|ref|YP_764971.1| putative outer membrane porin involved in nitrogen fixation
[Rhizobium leguminosarum bv. viciae 3841]
gi|16326461|gb|AAL17783.1|AF361470_3 ImpK [Rhizobium leguminosarum bv. trifolii]
gi|115253780|emb|CAK12174.1| putative outer membrane porin involved in nitrogen fixation
[Rhizobium leguminosarum bv. viciae 3841]
Length = 510
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 55/144 (38%), Gaps = 8/144 (5%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATIL 103
S LD Q +++ + +S + I F + +KF +LQ I L
Sbjct: 336 SRLDNLLAFLQPEVEKKLVTLSDSNGRLLVRISNSGLFATGSAEVSQKFHDLLQRIGGAL 395
Query: 104 NKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ + +TD++ +N +S+ RA + L I G A
Sbjct: 396 AA-ENFRAVVVGYTDNVPIRTVQFPSNWHLSEARAKAVGEILSSFTGPGA--ILTEGRAD 452
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF 183
PI NDT GR+ N+R EI +
Sbjct: 453 TDPIAANDTPEGREMNRRTEILVL 476
>gi|51598540|ref|YP_072728.1| flagellar motor protein MotB [Borrelia garinii PBi]
gi|51573111|gb|AAU07136.1| flagellar motor rotation protein B [Borrelia garinii PBi]
Length = 260
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 14/162 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE-KKFLPMLQL 98
+ ++ +K+ EF ++Q I+V + I + F S ++ + +Q
Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIMVRQEERGIVISLAADAFFDSASADVKLEDNRDSIQK 150
Query: 99 IATIL--NKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQ-----RGV 146
IA+ + I+ HTD+ G K+N +S R+ + +++
Sbjct: 151 IASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQSNVN 210
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
S V GF PI T+DT GR N+RI+I I ++
Sbjct: 211 SIENKFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTDASL 252
>gi|86133789|ref|ZP_01052371.1| OmpA family protein [Polaribacter sp. MED152]
gi|85820652|gb|EAQ41799.1| OmpA family protein [Polaribacter sp. MED152]
Length = 279
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 5/138 (3%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
L + + ++ + + F +++ L ++ IA I PS I I
Sbjct: 132 AELLNSDELDIDIDETVVMISVSDKLLFNTGSYRVKESALSLITKIADIAESEPSIDIMI 191
Query: 114 QSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ HTDS ++N +S +RA I L + + G P+ N +
Sbjct: 192 EGHTDSQSISNATVQDNWDLSVKRATSIVRLLQNKFKIDGSRLIASGRGDTVPLLPNTSS 251
Query: 170 VGRQNNQRIEIQIFPRGN 187
R N+R I I P N
Sbjct: 252 ENRAKNRRTRIVILPNIN 269
>gi|146276615|ref|YP_001166774.1| OmpA domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
gi|145554856|gb|ABP69469.1| OmpA domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 182
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + L L + L I I+ H D GT + NL + RA
Sbjct: 72 DRVFFLVDQSTLNDSARTTLDTQSQWLMANADYAIIIEGHADEQGTREYNLALGARRASA 131
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
++ YLI +G++ +R +V + + P++ T+ N+R + + G
Sbjct: 132 VQDYLISKGIAPSRMKTVS-YGKERPVEVCSTEECYSKNRRA-VTVLSMG 179
>gi|323143608|ref|ZP_08078285.1| peptidoglycan-associated lipoprotein [Succinatimonas hippei YIT
12066]
gi|322416671|gb|EFY07328.1| peptidoglycan-associated lipoprotein [Succinatimonas hippei YIT
12066]
Length = 181
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 9/184 (4%)
Query: 1 MIKELG---LSMFIMTTISGCGLASREKKK-VFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K+ + +GC E + L + + + G D A
Sbjct: 1 MNKKFFLAAACLLAAFAFTGCSTTGSEDGRSGTLVEDASGMGGDVQVGLDPDGA----VT 56
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G + G + ++ ++Q A L + P I I+ H
Sbjct: 57 VTGTDGYGSNFSGPEALRENNTIYFNYDSDQIHDNYVGVMQAHAKYLRENPDAHIIIEGH 116
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD GT + N+ + + RA + Y+ +S+ + + P+ + N+
Sbjct: 117 TDERGTPEYNIALGERRARSVARYMQ-NLGVDVNQLSIVSYGEEKPLVVGHNENAWAKNR 175
Query: 177 RIEI 180
R I
Sbjct: 176 RAVI 179
>gi|295395658|ref|ZP_06805850.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030]
gi|294971474|gb|EFG47357.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030]
Length = 607
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIG 121
VS GD + V F + ++ ++ IA L K + I+ HTD G
Sbjct: 278 SVSDRGDSSALNVSADVLFDFDSDKVKDSDSKLIDGIANELKKSAAGQKVTIEGHTDDEG 337
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG------RQNN 175
K N+ +S RA+ +K L + S +GF PI N T G + N
Sbjct: 338 DEKYNVDLSNRRAESVKKVLEPKVKGSGISFETKGFGESQPILPNRTAGGDAIKKNQAKN 397
Query: 176 QRIEIQIFPRGNI 188
+R+ P+G+I
Sbjct: 398 RRVSFSYKPQGDI 410
>gi|172064119|ref|YP_001811770.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171996636|gb|ACB67554.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 224
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/223 (15%), Positives = 72/223 (32%), Gaps = 43/223 (19%)
Query: 2 IKELGLSMFIM-TTISGCGLASR--------EKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
+ +L L++ + ++ C AS + + D + + + A
Sbjct: 1 MNKLALALALSTMALAACSTASGPTFSASELQPRDGVRTFQVDCHGLLSGPQTCMKAARK 60
Query: 53 EFQMQLQDTGIVVSRIGDMI--------------------------------TCYIPVHV 80
Q T + D +
Sbjct: 61 ICGDQPVRTVDSARALRDGSDPATLVFQCGAAPAEAASAAEPTPTPAPAAVEHVNLAGDA 120
Query: 81 SFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
F + L L + + T + + HTDS+G NL +S+ RA+ + +
Sbjct: 121 LFATGLATLTPAARASLDKLLSERADRTYTQVTVTGHTDSVGNDAANLALSKRRAETV-A 179
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ + + +SV G P+ +N T GR +N+R++I +
Sbjct: 180 GYLKAHGLNAQTVSVSGRGSADPVASNATAEGRASNRRVDISL 222
>gi|327481195|gb|AEA84505.1| flagellar motor protein MotB [Pseudomonas stutzeri DSM 4166]
Length = 244
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 55/179 (30%), Gaps = 9/179 (5%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE--DEFQMQLQDTGIVVSR 67
++ L S D E I V
Sbjct: 60 AASAMLAAGELGVALPAPAAPIPSIAPVPTPAADAQPDDPQESMPTTPGMALGDDIQVIV 119
Query: 68 IGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN- 125
I+ I + F LE L ++ + L + I ++ HTD++
Sbjct: 120 NEGSISFRISSEILFGSGRAELEDAGLEVIDRLVPTLAAN-AFRIVVEGHTDNLPIQTER 178
Query: 126 ---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N +S RA + +Q +S G+A P+ N + GR +N+R+E+
Sbjct: 179 FPSNWELSASRASSVVR-YLQLAGIEATRLSATGYADTRPLADNADERGRASNRRVELV 236
>gi|222055877|ref|YP_002538239.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221565166|gb|ACM21138.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 530
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 64/168 (38%), Gaps = 2/168 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+++ L+ ++ ++ D ++ + +++ +
Sbjct: 363 PKKEIPANLNPIEESSAEGVSPLYGIETRGDSLEISTAKAAPIATKMLVYRKFRFADIMF 422
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L + L +A + I HTDSIG+ N+ +S +RA I SY
Sbjct: 423 EFGQADLSNEVKKSLSEVAEQARADKHWTYMRIDGHTDSIGSTGYNMDLSVKRAIAIASY 482
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ-IFPRGN 187
LI + + ++G I N T GR+ N+R EI + P+G
Sbjct: 483 LIIKEGIDPSKVFIKGLGKSKLIGDNSTTEGRRLNRRFEILFLVPKGK 530
>gi|73540500|ref|YP_295020.1| OmpA/MotB [Ralstonia eutropha JMP134]
gi|72117913|gb|AAZ60176.1| OmpA/MotB [Ralstonia eutropha JMP134]
Length = 170
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 49/163 (30%), Gaps = 14/163 (8%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + + + R +D + D
Sbjct: 20 CSSGVKLDDAANAGANKGGTGADARTVQPVDVSRDPLNDP-------------NSPLAKR 66
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ ++ ML A L I IQ +TD GT + NL + Q+RA+ +
Sbjct: 67 SVYFDFDSYSVKPEYQSMLGEHAKYLGSNKGRKILIQGNTDERGTSEYNLALGQKRAEAV 126
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ L S+ + + P T + N+R +I
Sbjct: 127 RRSLAT-MGVSDSQMEAVSLGKEKPKSTGHDEAAWAENRRADI 168
>gi|88706015|ref|ZP_01103723.1| chemotaxis MotB protein [Congregibacter litoralis KT71]
gi|88699729|gb|EAQ96840.1| chemotaxis MotB protein [Congregibacter litoralis KT71]
Length = 216
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 61/161 (37%), Gaps = 13/161 (8%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ ++ + E+ L I + I + ++ L+ + +
Sbjct: 51 AEAEREQAQARRQVLEEALAGPLASGRITI--NDGRIGIS-GSVLFALNSDRLQDEGREL 107
Query: 96 LQLIATILN---KFPSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGV 146
L +A LN K ++ I TD + +N +S +RA + L+ G+
Sbjct: 108 LATLADPLNVFLKENDQLLMISGFTDDLPIQAGNLSFKDNWELSAQRALTVTRELVAAGL 167
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++R + F + P+ N + GR N+R+E+ PR
Sbjct: 168 PADRVFAAA-FGDQQPVAPNRDESGRALNRRVEMAPVPRST 207
>gi|320095395|ref|ZP_08027074.1| outer membrane protein [Actinomyces sp. oral taxon 178 str. F0338]
gi|319977666|gb|EFW09330.1| outer membrane protein [Actinomyces sp. oral taxon 178 str. F0338]
Length = 402
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 9/129 (6%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V G IT + E + L +A++L + HTDS
Sbjct: 274 GSLKPVESCGTTITLQ-DGVLFDFGESAVRADAADTLAKLASVLADAKVPAAHVYGHTDS 332
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQ 173
I N +S++RA + L + G +++ + +GF P+ N D GRQ
Sbjct: 333 ISDEAFNQTLSEQRAKAVVDELKKNGATAS--LDWQGFGETKPVAPNTNDDGTDNPAGRQ 390
Query: 174 NNQRIEIQI 182
N+R+EI I
Sbjct: 391 ANRRVEIFI 399
>gi|85705019|ref|ZP_01036119.1| OmpA domain protein [Roseovarius sp. 217]
gi|85670341|gb|EAQ25202.1| OmpA domain protein [Roseovarius sp. 217]
Length = 311
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 10/173 (5%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
+ +S G + ++D R D + + L+ G V
Sbjct: 144 VALIVSQSGQTGYVQTIQLTGLGQESDATGPRSPEVDDTSPPDVVQALKRYGHAV----- 198
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ + L P L+ +A L P+T +A+ HTDS G L+ N+ +S
Sbjct: 199 -----LEGLDFGSGDNALGPGPHPSLEALAAYLLTKPNTRVALVGHTDSTGGLEGNIALS 253
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ RA+ + S L + + G Y P+ N T GR++N+R+E +
Sbjct: 254 RSRAEAVLSVLTEIHGVPATQLEAHGIGYLAPLAPNTTGDGRESNRRVEAVLL 306
>gi|291286231|ref|YP_003503047.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
gi|290883391|gb|ADD67091.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 247
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 80/209 (38%), Gaps = 32/209 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFL----------HKSNDTDIVNKRFGSSLD------ 48
L F + +S + K KV L + N T++ + S L
Sbjct: 25 TLLMTFFILLLS-MASMDKRKIKVALGSLQGSLGVLKEGNKTEMTQEDIMSRLSFVQNVR 83
Query: 49 ----KAEDEFQMQLQDTG----IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
K + ++ + ++ ++ I + F + + P+L +
Sbjct: 84 SVQRKVTKSLREYVKSAQMSQVVTIAETKKGVSVRILDKMLFKSGSAEILDQGKPLLDKL 143
Query: 100 ATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
A ++ + P I ++ HTD I +N +S RA + Y + + VS+ R +S
Sbjct: 144 AAVIEESP-FNIMVEGHTDDIPISTALYPSNWELSTARAVSVVKYFMSKDVSAQR-LSAS 201
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
G+A +P+ N + R+ N+R+E+
Sbjct: 202 GYAEYHPVTPNISAASREKNRRVEVNFIS 230
>gi|71892117|ref|YP_277849.1| Pal [Candidatus Blochmannia pennsylvanicus str. BPEN]
gi|71796223|gb|AAZ40974.1| Pal [Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 175
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 25/186 (13%)
Query: 2 IKELGLSMFIMTTISGCGL------ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
K+L ++ + I+ C + +KKV L+ N T+I N R +D+
Sbjct: 7 FKQLISAISVSIVITACSSLSQYDTVTPNQKKVELNHFNHTNIKNSRV---IDEQIQLKT 63
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+L+ + + + + F L + A L P I I+
Sbjct: 64 QELKSNNV---------------IYFPLDQYDIPSNFFYSLNIHANFLYNNPLQHIKIEG 108
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
H D GT + N+ + + RA+ +KSYL +GV S + +++ + + P + N
Sbjct: 109 HADERGTPEYNIALGERRANSVKSYLQSKGVLSEQMLTIS-YGKEKPAVLGQNEEAYSKN 167
Query: 176 QRIEIQ 181
+R+ +
Sbjct: 168 RRVVLI 173
>gi|328542545|ref|YP_004302654.1| Omp16 protein [polymorphum gilvum SL003B-26A1]
gi|326412291|gb|ADZ69354.1| Omp16 protein [Polymorphum gilvum SL003B-26A1]
Length = 161
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 38/189 (20%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+ + + + ++ C + + + D
Sbjct: 6 MMARGARIAAIIGLTLALAACAQTKPDGLDGNVTPGSGQDF------------------- 46
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
V +GD + + L + L A LN + I ++ H
Sbjct: 47 -------VVNVGDRV-------FFAEDQSTLSTQARATLDKQAQWLNLYSRYTITLEGHA 92
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + N+ + RA+ + YL+ RGV+++R I + + P+ + N+R
Sbjct: 93 DERGTREYNIALGARRANSARDYLVSRGVAASR-IRTISYGKERPVAVCNDDSCWSQNRR 151
Query: 178 IEIQIFPRG 186
+ +
Sbjct: 152 A-VTVLNNA 159
>gi|241206240|ref|YP_002977336.1| hypothetical protein Rleg_3551 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860130|gb|ACS57797.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 343
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 66/185 (35%), Gaps = 21/185 (11%)
Query: 19 GLASREKKKVFLHKSNDT------DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
+++ + + + ++ + +GD
Sbjct: 162 ASEDKDRVSQTKIADLGSRLNVALAARVQELNRYRSDFFGRLR-EILSDRENIRIVGDRF 220
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---STVIAIQSHTDS-----I 120
+ L + + +A+ L + P + V+ + HTD+
Sbjct: 221 VFQ-SEVLFPSGGADLNPEGQTEMAKLASALLDLAKEIPPEINWVLRVDGHTDNVPLGGT 279
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G ++N +S RA + +LI +GV ++R ++ GF PI DT R N+RIE+
Sbjct: 280 GRYRDNWELSSARAISVVKFLIAQGVPADRLVAA-GFGEFQPIAPGDTPDARSTNRRIEL 338
Query: 181 QIFPR 185
++ +
Sbjct: 339 KLTEK 343
>gi|86138080|ref|ZP_01056655.1| hypothetical protein MED193_01095 [Roseobacter sp. MED193]
gi|85825107|gb|EAQ45307.1| hypothetical protein MED193_01095 [Roseobacter sp. MED193]
Length = 347
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I L+++ L + I+++ P+ VI + HTD G+ N +SQ
Sbjct: 236 ILSQSRSVNFAPGTSRLDQRSTSFLDSLFDIISRCPAMVIEVGGHTDDKGSAAANTRLSQ 295
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+RA + YL +G++ +R SV G+ P+ N++ R N+RI ++
Sbjct: 296 KRASSVVRYLSDKGIARDRLQSV-GYGESTPLVPNNSAQNRAKNRRIAFKVLN 347
>gi|110637015|ref|YP_677222.1| outer membrane protein A [Cytophaga hutchinsonii ATCC 33406]
gi|110279696|gb|ABG57882.1| outer membrane protein A [Cytophaga hutchinsonii ATCC 33406]
Length = 734
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I ++ + + P L + +L + P+ I + SHTD G+ N+ +SQ
Sbjct: 619 IYKIDDIYYDYNKATIRQDAKPALDQLMNLLTENPTMKIQLNSHTDCRGSDVYNMKLSQN 678
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND----TKVGRQNNQRIEIQIF 183
RA + +YL++R S + +G+ P+ T+ Q+N+R E QI
Sbjct: 679 RARAVVTYLVER-GISADRLKFKGYGETLPVTNCACTECTEQQYQDNRRTEFQII 732
>gi|261253096|ref|ZP_05945669.1| outer membrane protein [Vibrio orientalis CIP 102891]
gi|260936487|gb|EEX92476.1| outer membrane protein [Vibrio orientalis CIP 102891]
Length = 204
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 11/190 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + + + I + + + + + V+ D + +
Sbjct: 1 MNIRYLIPILAVVAIH--NTVAMAEDEYEYVEPPVANQVSDLTDDDKDGVVNA-RDICPG 57
Query: 61 T--GIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
T G V G + + F +Q +A L K+ S I I
Sbjct: 58 TPIGAQVDNDGCGAAIVEEEQRQLRILFANDSYEINPIFSDQIQTMAQFLEKYQSASIQI 117
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
Q + +G + NL +S++RA ++ L+ V R +++ G+ D +
Sbjct: 118 QGYASKVGDPEYNLELSKKRAHAVEDELLYFEVDPKR-VTIVGYGESRLEAEGDDETSHA 176
Query: 174 NNQRIEIQIF 183
N+R+ +
Sbjct: 177 LNRRVTATVV 186
>gi|319952843|ref|YP_004164110.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319421503|gb|ADV48612.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 644
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + ++ K +++ + LN++P+T I I SHTD+ NL +S+ R
Sbjct: 530 LNLEKIYFDFDQSYIRKDAQAIMEKVVAYLNQYPNTKIRIGSHTDARANDNYNLSLSERR 589
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYP--IDTNDT---KVGRQNNQRIEIQIF 183
A+ YL+++G+ ++R ++ +GF N+T Q N+R E +
Sbjct: 590 ANATYDYLVKKGIDASR-LTFKGFGETQLTNACDNNTNCSSEKHQLNRRSEFIVV 643
>gi|34497269|ref|NP_901484.1| flagellar motor protein MotD [Chromobacterium violaceum ATCC 12472]
gi|34103125|gb|AAQ59488.1| chemotaxis motB protein [Chromobacterium violaceum ATCC 12472]
Length = 277
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 54/151 (35%), Gaps = 7/151 (4%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
+ G +Q + +++ I I F + ++ +P+
Sbjct: 97 AEEAAKLGQLTQNLAKALSPLVQSGEVTITQSNQGIHIDIRDSALFAVGQAVPNQQSMPL 156
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRF 151
+ +A +L + I ++ TD N +S RA + + GV R
Sbjct: 157 MSNMAKLLAGVDNA-IKVEGFTDDAPIRTPVFPSNWELSAARAGGVVRLFQESGVDPQRL 215
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++V G P+ N T GR N+R+ I +
Sbjct: 216 VAV-GHGANQPVADNATADGRARNRRVTISV 245
>gi|162449977|ref|YP_001612344.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161160559|emb|CAN91864.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 274
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 68/178 (38%), Gaps = 14/178 (7%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A+ E++ L + + D+ L G+ V+ + + +P V
Sbjct: 86 ANLEQQARALEDFRRRAQQLEDIKKRFEVLRDKL-QALTKLGLSVTVRNNRMVIQLPGDV 144
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTV---IAIQSHTDSI----GTLKNNLLISQE 132
F L+K+ +L +A ++ + HTD+ G K+N +S
Sbjct: 145 LFDSGRETLKKEGQEILLKVAEVIRNDSGLSARSFQVAGHTDNAPLAGGRFKDNWGLSVM 204
Query: 133 RADVIKSYLIQ-----RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA + ++L+Q G S G+ P+ NDT +Q N+R E+ + P
Sbjct: 205 RAREVLAFLLQPEDKGGGGLKPERWSASGYGDTDPVKPNDTPENKQANRRCELVVLPN 262
>gi|295688124|ref|YP_003591817.1| peptidoglycan-associated lipoprotein [Caulobacter segnis ATCC
21756]
gi|295430027|gb|ADG09199.1| peptidoglycan-associated lipoprotein [Caulobacter segnis ATCC
21756]
Length = 184
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ D + E + P+L A LN++PS + I+ + D GT + N
Sbjct: 65 SVQDFVVNVGDRVYFDTDEYSVRADGQPVLAGQAQWLNRYPSVKVRIEGNADERGTREYN 124
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
L + RA+ ++ +LI +GVS++R ++ F + PID T+ N+
Sbjct: 125 LALGARRANAVRDFLIAQGVSASRIETIS-FGKEKPIDAGSTEEAWAKNR 173
>gi|50085748|ref|YP_047258.1| putative outer membrane lipoprotein [Acinetobacter sp. ADP1]
gi|49531724|emb|CAG69436.1| putative outer membrane lipoprotein [Acinetobacter sp. ADP1]
Length = 254
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
F QL + D + I L +L +A L K +
Sbjct: 127 RFNSQLTINQAEQKIVDDALKNRIIE--FESGSAILTASGQQILDEMAAALKKVGGKKVK 184
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTDS G NL++SQERA +K+YLI + S+ +S G P+ N T GR
Sbjct: 185 IIGHTDSSGDASKNLVLSQERAVAVKNYLITK-NISSDNLSTEGVGSNKPVADNTTAEGR 243
Query: 173 QNNQRIEIQIF 183
+ N+RIE ++
Sbjct: 244 RKNRRIEFEVL 254
>gi|84385674|ref|ZP_00988705.1| Conserved hypothetical outer membrane protein [Vibrio splendidus
12B01]
gi|84379654|gb|EAP96506.1| Conserved hypothetical outer membrane protein [Vibrio splendidus
12B01]
Length = 212
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 60/203 (29%), Gaps = 25/203 (12%)
Query: 2 IKELGLSMFIMTTI-------------SGCGLA------SREKKKVFLHKSNDTDIVNKR 42
+K+L + +++T+ C A S V + +
Sbjct: 1 MKKLMIGSIVISTLQFSLIANAEEGISVYCDTAFSEYQHSVTVDDVVGIAQHRQGFIQIE 60
Query: 43 FGSSLDKAEDEFQMQ----LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
S + + Q + +G + + L L
Sbjct: 61 QQSDSSELKQALADQSNLGMNQSGCKTWISNQERHGLLARLHFGFDQHNLSPMGSKALSQ 120
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A L + I + HTDS G N + +RA + + +R F
Sbjct: 121 LAGELKTN-GSAITVDGHTDSTGEAGYNQALGLQRALTTSD-GLVADGVEKNRLVIRSFG 178
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQ 181
PI +N T GR N+R EI
Sbjct: 179 ESKPIASNATAEGRAKNRRSEIW 201
>gi|325920959|ref|ZP_08182848.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas gardneri ATCC 19865]
gi|325548579|gb|EGD19544.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas gardneri ATCC 19865]
Length = 400
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Query: 73 TCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + F + + +L ++A L K + + ++ HTD+ G+ N +S+
Sbjct: 285 LITLNERILFDFDKAGIRPDAARVLDVLAAALGKVNTKDMQVRGHTDAKGSNAYNQALSE 344
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQI 182
RAD + + L RG + + +G+ P+ N D GRQ N+R+EI +
Sbjct: 345 RRADAVLAALRTRGAAQSAG--AKGYGESQPVAPNTLNGQDNPGGRQLNRRVEIFL 398
>gi|254457990|ref|ZP_05071417.1| OmpA/MotB [Campylobacterales bacterium GD 1]
gi|207085383|gb|EDZ62668.1| OmpA/MotB [Campylobacterales bacterium GD 1]
Length = 219
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
++ ++ VN+ + +D +E + I V + +P
Sbjct: 29 SKQRMQQSTPIDSNDESSEAVNRVAQAVID--ANEMMEKGHGPAISVEEAQEGFVIELPA 86
Query: 79 HVSFV-SEVFL-EKKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGT-----LKNNLLIS 130
+ F + + L L+ +A I+ + P+ +++Q HTD+ G K+N +S
Sbjct: 87 SLLFKSGSATIENEDALLFLKRVALIVEELPNSMQVSVQGHTDNQGPGNNSVFKDNWELS 146
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
RA + L+ V R IS GFA P+ TN T+ GR+ N+R+E+
Sbjct: 147 SARAISVLQELLLDSVDPKR-ISASGFAEYKPLATNVTEAGREKNRRVEL 195
>gi|225848487|ref|YP_002728650.1| OmpA/MotB [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643425|gb|ACN98475.1| putative OmpA/MotB [Sulfurihydrogenibium azorense Az-Fu1]
Length = 281
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 2/151 (1%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
N D K + + E + + I + + + VH +++ V ++K++L
Sbjct: 130 NIPDKAQKEVKVATEPQEMKPSDVITKNEIKEVKEKQALEEPVRVH-FYLNSVSIKKEYL 188
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
P L ++A L P + I +TD+IG+ N ++ +RA+ +K YL++ G+ NR +
Sbjct: 189 PYLNVVARYLKTHPDVKVKIVGYTDNIGSKAYNDKLALKRAETVKKYLVKMGIDPNRIL- 247
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ G I +N ++ R N+R E +
Sbjct: 248 IEGVGKDKYIVSNKNEIDRFTNRRAEFYVIN 278
>gi|239832801|ref|ZP_04681130.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825068|gb|EEQ96636.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 343
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------ST 109
++ + +GD + + ++ +A +N+ +
Sbjct: 205 EILSDKENIRIVGDRFVFQ-SEVLFPTGSSDINPAGQDEMKKLADAVNQLNQEIPDDINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI GV +NR ++ GF P+D
Sbjct: 264 VLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGEYQPLD 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
+DT R N+RIE+++ R
Sbjct: 323 ASDTADARAKNRRIELKLTER 343
>gi|253991260|ref|YP_003042616.1| outer membrane protein, ompa/motb family [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|211638308|emb|CAR66931.1| outer membrane protein, ompa/motb family [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253782710|emb|CAQ85875.1| outer membrane protein, ompa/motb family [Photorhabdus asymbiotica]
Length = 387
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 7/137 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPS 108
Q ++ I VS+ D ++ + F S L + LQ +A LN
Sbjct: 243 LRQVLQPMIEQQDITVSQNADNVSVTLQGGGLFASASATLNPLYQTPLQELAKQLNLTTG 302
Query: 109 TVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ ++ H+D++ +N +S RA+ + L + + + V + P+
Sbjct: 303 -KVIVRGHSDNLPIHTHTYSSNYALSLARAETVAQQLRTN-LLQPQRLQVESAGAEAPLV 360
Query: 165 TNDTKVGRQNNQRIEIQ 181
N T R N+RIEI
Sbjct: 361 PNTTAKNRALNRRIEII 377
>gi|197337755|ref|YP_002158384.1| OmpA family protein [Vibrio fischeri MJ11]
gi|197315007|gb|ACH64456.1| OmpA family protein [Vibrio fischeri MJ11]
Length = 1600
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 20/181 (11%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV-----VSRIG-DMIT 73
S ++ + + + + ++ + D+A D + +L + V +G
Sbjct: 574 SVSNDRLQEAAIPRDSEEAIKEQQNAY-DQAVDSMRAKLAQLVVKDQKHHVETVGFSEFQ 632
Query: 74 CYIPVHVSFVSEVFLEKKFLPM---LQLIATILNKFPST--VIAIQSHTDSIGTLKNNLL 128
+ + ++ F Q IA L K VI I HT SIG+ NL
Sbjct: 633 LRLDATMFDFDSHEIQPDFSGASTPFQSIAEELKKLSGAPFVIMIIGHTCSIGSEAYNLE 692
Query: 129 ISQERADVIKSYLIQ------RGVSSNRFISVRGFAYKYPI--DTNDTKVGRQNNQRIEI 180
+S++RA +K+ +I + + V+G P+ + N+T+ R+ N+R+EI
Sbjct: 693 LSKQRAVAVKNSIIDALSDEKYKSIWSDLLVVKGEGESTPLPGNNNETEEERKLNRRVEI 752
Query: 181 Q 181
Sbjct: 753 V 753
>gi|254373811|ref|ZP_04989294.1| hypothetical protein FTDG_01595 [Francisella novicida GA99-3548]
gi|151571532|gb|EDN37186.1| hypothetical protein FTDG_01595 [Francisella novicida GA99-3548]
Length = 207
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 65/202 (32%), Gaps = 28/202 (13%)
Query: 1 MIKE--LGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ + L++ M ++ C + + K D SS + +
Sbjct: 1 MMKKRIINLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSS----QIYGSDK 56
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L + +++ + L A L P I + +T
Sbjct: 57 LSSDQVE-QMKKELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNT 115
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT------------ 165
D G+ K N + Q+RA+ + +YL+ + + I V + P
Sbjct: 116 DPRGSEKYNFNLGQKRAEAVYNYLLGK-NVNKDQICVVSYGKLKPAAEPTQFYDEFCKDG 174
Query: 166 -ND------TKVGRQNNQRIEI 180
ND ++ ++R EI
Sbjct: 175 VNDACMYKASEKAYYLDRRTEI 196
>gi|90422320|ref|YP_530690.1| hypothetical protein RPC_0800 [Rhodopseudomonas palustris BisB18]
gi|90104334|gb|ABD86371.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 341
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 13/159 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + + + +GD + L+ + L
Sbjct: 186 AQRVQELSRYRSEFFGRLR-AILGNRPDIRIVGDRFVFE-SEVFFDTGQAQLKPEGRAEL 243
Query: 97 QLIATIL----NKFPS---TVIAIQSHT---DSIGTLKNNLLISQERADVIKSYLIQRGV 146
+A+ L K P+ V+ + HT G K+N +S RA + YL+ GV
Sbjct: 244 DKLASALIDLDKKIPAEIAWVLRVDGHTDVRPITGAFKSNWELSSGRAISVVQYLVSLGV 303
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
R ++ GF P+D T+ + N+RIE+++ R
Sbjct: 304 PPQRLVAA-GFGEFQPLDVAATEEAYKRNRRIELKLTER 341
>gi|323700000|ref|ZP_08111912.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323459932|gb|EGB15797.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 192
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 16/194 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASR-----------EKKKVFLHKSNDTDIVNKRFGSSLDKA 50
+K+ + + ++GCG + V + +
Sbjct: 1 MKKFAMILAACLWLAGCGGGQTIVLLPDLDGHVGEVTVTSEGGRTATLTQANQAVTGTTR 60
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ + + + L + +L I S
Sbjct: 61 VTTLSEAEVQSEFGAAMAAQPLPTARFILHFHSDSTRLTDESKALLPDILESWRSRSSRD 120
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+++ HTD++G + N +S RA+ ++ L+ +G I + + P+ T
Sbjct: 121 VSVVGHTDTLGEKQYNYDLSVRRAEKVRD-LLVKGGMPEDIIEMTSHGEENPLIP--TPD 177
Query: 171 GRQ--NNQRIEIQI 182
GR N+R+E+ +
Sbjct: 178 GRSEPRNRRVEVLV 191
>gi|260773875|ref|ZP_05882790.1| protein F-related protein [Vibrio metschnikovii CIP 69.14]
gi|260610836|gb|EEX36040.1| protein F-related protein [Vibrio metschnikovii CIP 69.14]
Length = 208
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 3/153 (1%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS-RIGDMITCYIPVHVSFV-SEVFLEK 90
+ T+ + ++ + L G+ GD + V F +
Sbjct: 53 AAKTESMPATHQPMKTLSDSSLESFLSANGLDYELIPGDHTMVKLKRAVQFQTGSAVVPS 112
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+ L + L P I I+ HTD+ GT + N +S RAD +K+ L+++ VS
Sbjct: 113 ASVQWLAQLGRYLANTPQIDIVIEGHTDNTGTERFNDGLSMRRADTVKNILLEQQVSLA- 171
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
I RG+ P TN T GR N+R+E+ +
Sbjct: 172 AIYTRGYGEHTPACTNQTSQGRACNRRVELLMI 204
>gi|148284999|ref|YP_001249089.1| peptidoglycan-associated lipoprotein precursor [Orientia
tsutsugamushi str. Boryong]
gi|146740438|emb|CAM80934.1| peptidoglycan-associated lipoprotein precursor [Orientia
tsutsugamushi str. Boryong]
Length = 202
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 18/198 (9%)
Query: 1 MIKELGLSMFIMTTISG----CGLASREKKK--VFLHKSNDTDIVNKRFGSSLDKAEDEF 54
MIK+ +S+ ++ +SG C +++ + + D N + E
Sbjct: 1 MIKKSIISICVLVLLSGYKWKCLWPRYKQRNFISQVLGTKDFKEDNDDIAEIVSSINAES 60
Query: 55 QMQL------QDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFP 107
Q+ Q+ + V + + V F + + L ++ +L+ + L P
Sbjct: 61 SDQVTSNNAQQEGYVDVKHEQFLQAIHRKHKVYFATEKFDLSEESKRVLRAQSDWLKNNP 120
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP---ID 164
I I+ H D GT + NL + ++RAD +K +L+ S I + P +
Sbjct: 121 DVKIIIEGHCDERGTREYNLALGKKRADSVKQFLVTL-GVSRDKIETTSYGKDKPEVEVT 179
Query: 165 TNDTKVGRQNNQR-IEIQ 181
++ + N+R + I
Sbjct: 180 KDNKDEAYRLNRRSVTII 197
>gi|30314442|gb|AAP15430.1| outer membrane lipoprotein precursor [Burkholderia pyrrocinia]
Length = 149
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 61 TGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
T + V + D ++ ++ P++Q A L P + IQ +TD
Sbjct: 26 TQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDE 85
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + Q+RA+ ++ + GV+ ++ +V + P T + N+R +
Sbjct: 86 RGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRAD 144
Query: 180 IQ 181
+
Sbjct: 145 LV 146
>gi|86130800|ref|ZP_01049399.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85818211|gb|EAQ39371.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 632
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 64/155 (41%), Gaps = 4/155 (2%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ K ++ + + I+ + + + +
Sbjct: 479 TASADGYKEANQNITVGKSGMSQTITLEPIIDQVVVTETEVVLNPIYFDFDKSNIRPSAA 538
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L + ++ ++P+ VI+ +SHTD G+ N +SQ RAD ++ Y++ +G++++R S
Sbjct: 539 AELDRLVNVMKQYPTMVISAESHTDIRGSESYNKNLSQRRADSMRDYVVSKGINASRISS 598
Query: 154 VRGFAYKYPID---TNDTKVGRQNNQRIEIQIFPR 185
+ G P TN T+ Q N+R +I R
Sbjct: 599 I-GKGESEPAIACGTNCTEDEHQLNRRSVFKIVTR 632
>gi|317486269|ref|ZP_07945101.1| peptidoglycan-associated lipoprotein [Bilophila wadsworthia 3_1_6]
gi|316922439|gb|EFV43693.1| peptidoglycan-associated lipoprotein [Bilophila wadsworthia 3_1_6]
Length = 165
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 62/187 (33%), Gaps = 28/187 (14%)
Query: 2 IKELGLSMFIMTTIS---GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
K L L + ++ + GC ++ + + A + +
Sbjct: 4 FKRLALVVTLVVAMGAGFGCAKKQT--------GADVAPATTADDNGAANAAIERAAQAI 55
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
D + + ++ + ML+ A ++ +PS + I+ + D
Sbjct: 56 TDGIV----------------YFDFDKSDIKAESRDMLRQKAELMKAYPSIRVRIEGNCD 99
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ GT + NL + + RA YL+ + + + F + P N+R
Sbjct: 100 ARGTQEYNLALGERRARAAYEYLVML-GVNPDQMEMISFGKERPAVEGTGPAVWAKNRRD 158
Query: 179 EIQIFPR 185
+ ++ +
Sbjct: 159 DFRVIAK 165
>gi|189353654|ref|YP_001949281.1| putative OmpA family transmembrane protein [Burkholderia
multivorans ATCC 17616]
gi|189337676|dbj|BAG46745.1| putative OmpA family transmembrane protein [Burkholderia
multivorans ATCC 17616]
Length = 171
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 25/180 (13%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
G ++ + +GC A + + L+ G
Sbjct: 17 GATLLGVLLSAGCHTAPPHRG-----------------------LTETQVTTLKSAGFKE 53
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ G P + L+ +++ I L+ + + +TD GT
Sbjct: 54 TEQGFEFGAAGP-ILFDFDRYNLKPDVRRIVERIGRTLHSAGIDGVRVYGYTDDEGTDGY 112
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+L +S+ RA+V+ L+ R I++ G P+ N VGR N+R I + PR
Sbjct: 113 DLELSRRRAEVVAIELVD-VGLDARRIAIVGRGKHDPVGDNRMPVGRAQNRRAAIVVSPR 171
>gi|26991353|ref|NP_746778.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|24986416|gb|AAN70242.1|AE016663_10 OmpA family protein [Pseudomonas putida KT2440]
Length = 172
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 57/178 (32%), Gaps = 28/178 (15%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+F M ++GC A + E L+ G +
Sbjct: 21 LLFAMLALTGCQSAPQ------------------------KGLTPEQIAVLKREGFTPTD 56
Query: 68 IGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
G + V F S+ L + +++ I L + + H DS G N
Sbjct: 57 EGW--AYDLSGKVLFGSDLDSLNGQSQAIVERIGKALLGVGIQGVRVDGHADSSGKAAYN 114
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ RA + + + I RG P+ N T GR N+R+ I +
Sbjct: 115 QQLSERRAQSVTK-ALVGIGMQAQNIQSRGLGSSQPVADNRTSAGRTENRRVSIVVAS 171
>gi|323138982|ref|ZP_08074042.1| peptidoglycan-associated lipoprotein [Methylocystis sp. ATCC 49242]
gi|322395736|gb|EFX98277.1| peptidoglycan-associated lipoprotein [Methylocystis sp. ATCC 49242]
Length = 179
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+Q +GI + + F ++ L L A LN++ ++ H
Sbjct: 50 VQRSGIASPGSAQDFATNVGDRIFFETDSTDLTSTAQATLDKQAEWLNRYGRYSFTVEGH 109
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
D GT + N + RA+V K+YLI +GVS +R +V + + P+ D N+
Sbjct: 110 ADERGTREYNFALGARRAEVTKNYLISKGVSGSRIRTVS-YGKERPVAVCDDISCWSQNR 168
Query: 177 RIEIQIFPRGN 187
R + + GN
Sbjct: 169 RA-VTLLAGGN 178
>gi|315082132|gb|EFT54108.1| OmpA family protein [Propionibacterium acnes HL078PA1]
Length = 368
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 56/147 (38%), Gaps = 3/147 (2%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D+ ++ + V++ I + + ++ ++
Sbjct: 221 DLAGVDVSKFVNALVTTTGDASDASREWVTKESMKIDLDA-SVLFDLDSDVVKPAGRQII 279
Query: 97 QLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
A L S I + +TDS G+ +NL +S+ RA + L + ++
Sbjct: 280 DRTAKQLVARKVSGKIEVTGYTDSSGSASHNLDLSRRRAASVAKVLGSQLSKGITLVTA- 338
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ +ND++ GR+ N+R+ I +
Sbjct: 339 GKGEADPVTSNDSEAGRRLNRRVTITV 365
>gi|269104725|ref|ZP_06157421.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP
102761]
gi|268161365|gb|EEZ39862.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP
102761]
Length = 188
Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 71/179 (39%), Gaps = 4/179 (2%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
+ ++ GC +++++ K + + A+ + + G D
Sbjct: 1 MALSLFGCSISAQQPPVATQTKDLRDFDSDGVINARDKCADTPLGAVVDNDGCPTYVKTD 60
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ + + ++ L+ A L FP T I ++ + +G +N +S
Sbjct: 61 E--KNSVHVLFANDSTVIPETYMAQLKKTAQFLETFPETHIELKGYASPVGNSAHNQYLS 118
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-PRGNI 188
RA ++ LI GV+++R +V GF PI ++ ++R+ Q+ +G++
Sbjct: 119 DTRAANVRQQLIDFGVAADRIKTV-GFGDADPIQAETSEASNTLSRRVVAQVVGSKGHV 176
>gi|156977399|ref|YP_001448305.1| hypothetical protein VIBHAR_06186 [Vibrio harveyi ATCC BAA-1116]
gi|156528993|gb|ABU74078.1| hypothetical protein VIBHAR_06186 [Vibrio harveyi ATCC BAA-1116]
Length = 216
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L L +A+ L++ + I ++ HTDS G+ N + +RA
Sbjct: 107 FGFDQSSLTPMGNKALTQLASSLSE-GDSPITVEGHTDSKGSEGYNQELGLQRALTTSK- 164
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
++ I VR PI +N T GR N+R E+ + ++K
Sbjct: 165 VLSTDGVERTRIVVRSLGETQPIASNSTVEGRAQNRRSEVWVSKNDSVK 213
>gi|153833252|ref|ZP_01985919.1| outer membrane protein [Vibrio harveyi HY01]
gi|148870523|gb|EDL69438.1| outer membrane protein [Vibrio harveyi HY01]
Length = 216
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L L +A+ L++ + I ++ HTDS G+ N + +RA
Sbjct: 107 FGFDQSSLTPMGNKALTQLASSLSE-GDSPITVEGHTDSKGSEGYNQELGLQRALTTSK- 164
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
++ I VR PI +N T GR N+R E+ + ++K
Sbjct: 165 VLSTDGVERTRIVVRSLGETQPIASNSTVEGRAQNRRSEVWVSKNDSVK 213
>gi|167567883|ref|ZP_02360799.1| hypothetical protein BoklE_35363 [Burkholderia oklahomensis EO147]
Length = 421
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 7/139 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V + F + P++ IA + K P
Sbjct: 283 RLKALLGNEIAAGTVSVDEDSRHGSVTFRSDAMFSPGAAAVNSTMGPLIAKIAGEIVKVP 342
Query: 108 STVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +TD++ S+ERA + L GV ++R SV G PI
Sbjct: 343 G-KVTVTGYTDNVPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLESV-GKGDADPI 400
Query: 164 DTNDTKVGRQNNQRIEIQI 182
N T GR N+R++I +
Sbjct: 401 GDNGTVQGRALNRRVDITV 419
>gi|295135723|ref|YP_003586399.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda
SM-A87]
gi|294983738|gb|ADF54203.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda
SM-A87]
Length = 536
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + +++ +L + IL +T I I SH D+ GT + NL +SQ RAD
Sbjct: 419 NRIYFEFDKSKVTEEYQEVLDKVIDILKGSDATEIKIASHADARGTEEYNLKLSQRRADA 478
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
K YL+ + S+ I+ +G+ P++ T+ N+R I
Sbjct: 479 TKEYLVAK-GISSENITTKGYGESQPVNDCTEERGCTEAEYAKNRRSVITFT 529
>gi|223038721|ref|ZP_03609014.1| Omp18 [Campylobacter rectus RM3267]
gi|222880123|gb|EEF15211.1| Omp18 [Campylobacter rectus RM3267]
Length = 189
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 65/170 (38%), Gaps = 17/170 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + E N ++ + S + + ++ V
Sbjct: 35 GCSSKTPEVDMSADANQNMGNMGSSDNMMSDSERLQQLISSIEGQVQTV----------- 83
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ P++ A + N+ + + I+ + D GT + N + +RA
Sbjct: 84 ---YFDFDKFNIKGDMQPVINTNAGLFNQSEAQALSVKIEGNCDEWGTDEYNYALGLKRA 140
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
K L+++GV+++R + V + P+ T+ TK N+R E ++ P
Sbjct: 141 KAAKDALVKQGVAADRIM-VVSYGESNPVCTDKTKACDAQNRRAEFKVLP 189
>gi|115526690|ref|YP_783601.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115520637|gb|ABJ08621.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 165
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 62/174 (35%), Gaps = 29/174 (16%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + + ++ C K L ++ + GS D
Sbjct: 12 KWAAVLAVALSMGACA------NKNPLGGADGSMASAASPGSQQD--------------- 50
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V +GD + + L + + L+ A L ++ I+ H D GT
Sbjct: 51 FVVNVGDRV-------FFESDQTDLSPQAIATLEKQAQWLQQYNRYAFTIEGHADERGTR 103
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N+ + RA ++SYL RG+ ++R ++ + + P+ + N+R
Sbjct: 104 EYNIALGARRAQSVRSYLASRGIDASRMRTIS-YGKERPVAVCNDISCWSQNRR 156
>gi|325926546|ref|ZP_08187862.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas perforans 91-118]
gi|325543054|gb|EGD14501.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas perforans 91-118]
Length = 400
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Query: 73 TCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + F + + +L + K + + ++ HTD+ G+ N +S+
Sbjct: 285 LITLNDRILFDFDKSDIRPDAARVLDTLGAAQTKVTAKDMQVRGHTDAKGSDDYNQALSE 344
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQI 182
RA+ + + L RG + + +G+ P+ N D GRQ N+R+EI +
Sbjct: 345 RRANAVLAALRARGAAQSAN--AKGYGESQPVAPNTLNGQDNPGGRQLNRRVEIFL 398
>gi|223938134|ref|ZP_03630031.1| peptidoglycan-associated lipoprotein [bacterium Ellin514]
gi|223893178|gb|EEF59642.1| peptidoglycan-associated lipoprotein [bacterium Ellin514]
Length = 214
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 33/115 (28%), Gaps = 1/115 (0%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
D + + L +A L P T + ++ + D GT + N +
Sbjct: 98 DRAALAGATVYFDFDKFSIRSSDQSKLSEVANYLKSHPGTAVRVEGNCDERGTEEYNRSL 157
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ RA + L + F P + N+R E +
Sbjct: 158 GERRALAAREALAT-MGVDPTLVETVSFGEDKPAVPGHDESAYAKNRRDEFVVLN 211
>gi|237756911|ref|ZP_04585384.1| putative OmpA/MotB domain protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237690932|gb|EEP60067.1| putative OmpA/MotB domain protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 260
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+K ++ +++ + + + ++K++LP L ++A L P
Sbjct: 122 NKEPEKLDTGVKEKEAPKTYKSTDAIIQPVRIHFYSNSSKIKKEYLPYLNVVAKYLKTHP 181
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I+ +TD+IG+ K N ++ +RA+ +K YLI + S I + G I +N+
Sbjct: 182 DVKVKIKGYTDNIGSKKYNDKLALKRAEAVKQYLI-KLGVSPNRIMIDGVGKSEYIVSNN 240
Query: 168 TKVGRQNNQRIEIQIFP 184
++ R N+R E I
Sbjct: 241 NELDRFTNRRAEFYIIN 257
>gi|167574381|ref|ZP_02367255.1| hypothetical protein BoklC_31379 [Burkholderia oklahomensis C6786]
Length = 421
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 7/139 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ + ++ + V + F + P++ IA + K P
Sbjct: 283 RLKALLGNEIAAGTVSVDEDSRHGSVTFRSDAMFSPGAAAVNSTMGPLIAKIAGEIVKVP 342
Query: 108 STVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +TD++ S+ERA + L GV ++R SV G PI
Sbjct: 343 G-KVTVTGYTDNVPINSRQFASNEALSEERATQVMQMLQSAGVPASRLESV-GKGDADPI 400
Query: 164 DTNDTKVGRQNNQRIEIQI 182
N T GR N+R++I +
Sbjct: 401 GDNGTVQGRALNRRVDITV 419
>gi|219684669|ref|ZP_03539612.1| flagellar motor apparatus [Borrelia garinii PBr]
gi|219672031|gb|EED29085.1| flagellar motor apparatus [Borrelia garinii PBr]
Length = 260
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 14/162 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE-KKFLPMLQL 98
+ ++ +K+ EF ++Q I+V + I + F S ++ + +Q
Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIMVRQEERGIVISLAADAFFDSASADVKLEDNRDSIQK 150
Query: 99 IATIL--NKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQ-----RGV 146
IA+ + I+ HTD+ G K+N +S R+ + +++
Sbjct: 151 IASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQSNVK 210
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
S V GF PI T+DT GR N+RI+I I ++
Sbjct: 211 SIENKFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTDASL 252
>gi|170717596|ref|YP_001783489.1| peptidoglycan-associated lipoprotein [Haemophilus somnus 2336]
gi|168825725|gb|ACA31096.1| Peptidoglycan-associated lipoprotein [Haemophilus somnus 2336]
Length = 151
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 21/182 (11%), Positives = 55/182 (30%), Gaps = 36/182 (19%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K +L + + ++ C + K
Sbjct: 1 MKNFAKLLVVAGSVAVLAACSSSDNASKTNA--------------------------QMF 34
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + ++ ++ +L + L P++ + ++ H D
Sbjct: 35 GGYSVT------DLQQRYNTVYFEFDSYDVQGEYAQILDAHSAYLKSTPASKVLVEGHAD 88
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N+ + RAD +K++L+ + +S + + P + + N+R
Sbjct: 89 ERGTPEYNMALGLRRADAVKNFLLNK-GVQASQLSTLSYGEEKPAELGHNEAAYSKNRRA 147
Query: 179 EI 180
Sbjct: 148 VF 149
>gi|317011324|gb|ADU85071.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
SouthAfrica7]
Length = 182
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 65/184 (35%), Gaps = 5/184 (2%)
Query: 2 IKELGLSMFIMTTI--SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K + F++ + +GC + +K+ V S T + E+ + +
Sbjct: 1 MKRFSVFSFVVAFLLIAGC-KHNMDKETVAGDVSAKTVQTAPVTTEPAPEKEEPKEEPVP 59
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
++ I + ++ L I + + ++ +TD
Sbjct: 60 VVEEKPAKPAIESGTIIASIYFDFDKYEIKDSDQETLDEIVQKAKEN-HMQVLLEGNTDE 118
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G+ + N + +R +K+ L+ + I F P T T+ + N+R++
Sbjct: 119 FGSSEYNQALGVKRTLSVKNALVIK-GVEKDMIKTISFGEAKPKCTQKTRECYKENRRVD 177
Query: 180 IQIF 183
+++
Sbjct: 178 VKLV 181
>gi|126662535|ref|ZP_01733534.1| OmpA family protein [Flavobacteria bacterium BAL38]
gi|126625914|gb|EAZ96603.1| OmpA family protein [Flavobacteria bacterium BAL38]
Length = 621
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 10/139 (7%)
Query: 56 MQLQDTGIVVSRIGDMIT-------CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ ++ +VV + + I + ++ + L + ++N++P
Sbjct: 484 KKAENEQVVVEALLNPIIPIITEKEVILQPIFFEFNKSNITADGAAELDKLVAVMNEYPE 543
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND- 167
VI +SHTDS G+ N+ +S RA YLI + + IS +GF P
Sbjct: 544 MVIFAKSHTDSRGSDSYNIKLSDRRAKSTVQYLISK-GVAKERISGQGFGESEPKVACKS 602
Query: 168 -TKVGRQNNQRIEIQIFPR 185
T+ N+R E I +
Sbjct: 603 CTEEEHAQNRRSEFLIVKK 621
>gi|30314434|gb|AAP15426.1| outer membrane lipoprotein precursor [Burkholderia ambifaria]
Length = 149
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Query: 61 TGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + D ++ ++ P++Q A L P + IQ +TD
Sbjct: 26 AQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDE 85
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + Q+RA+ ++ + GV+ ++ +V + P + + N+R +
Sbjct: 86 RGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVS-LGKEKPQASGHDEASWAQNRRAD 144
Query: 180 IQ 181
+
Sbjct: 145 LV 146
>gi|219685751|ref|ZP_03540562.1| flagellar motor apparatus [Borrelia garinii Far04]
gi|219672690|gb|EED29718.1| flagellar motor apparatus [Borrelia garinii Far04]
Length = 260
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 14/162 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE-KKFLPMLQL 98
+ ++ +K+ EF ++Q I+V + I + F S ++ + +Q
Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIMVRQEERGIVISLAADAFFDSASADVKLEDNRDSIQK 150
Query: 99 IATIL--NKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQ-----RGV 146
IA+ + I+ HTD+ G K+N +S R+ + +++
Sbjct: 151 IASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQSNVK 210
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
S V GF PI T+DT GR N+RI+I I ++
Sbjct: 211 SIENKFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTDASL 252
>gi|240948556|ref|ZP_04752929.1| outer membrane protein precursor PalA [Actinobacillus minor NM305]
gi|240297064|gb|EER47635.1| outer membrane protein precursor PalA [Actinobacillus minor NM305]
Length = 156
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 55/179 (30%), Gaps = 30/179 (16%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K ++ + ++ C ++ + +
Sbjct: 1 MKKLAKVLMVAAPAFVLAACSSSTDNAAANANANAAADSQTFGGISA------------- 47
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ +E ++ +L A +LN + + H D
Sbjct: 48 -----------QDLQTRYNTVYFAFDSYAIEGEYRQLLDAHAQLLNATK-ANVTVAGHAD 95
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RA+ +++YL Q+G +S + + P T+ N+R
Sbjct: 96 ERGTPEYNIALGQRRANAVQNYLAQQG---ATNVSTVSYGEEKPAVLGHTEADYAKNRR 151
>gi|212704357|ref|ZP_03312485.1| hypothetical protein DESPIG_02412 [Desulfovibrio piger ATCC 29098]
gi|212672216|gb|EEB32699.1| hypothetical protein DESPIG_02412 [Desulfovibrio piger ATCC 29098]
Length = 331
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 3/156 (1%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
++ I S L +AED + ++ + +
Sbjct: 175 ADTPQGEATVKAIAGMNPASVLVRAEDLATSDAEVERFVLAVFCQEETVIVLRGVNFAFD 234
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L+ K + +L A ++ P+T I + TDS G+ N +S+ RA+ +K YL ++
Sbjct: 235 SYALDSKAMGILDEAAGLIKSKPNTKIVLTGWTDSRGSDAYNAKLSKNRAEAVKGYLAKQ 294
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GV ++R + G + +ND++ GR N+R EI
Sbjct: 295 GVPASRM-TAIGKGKSF-KYSNDSEEGRYMNRRTEI 328
>gi|300723714|ref|YP_003713021.1| putative outer membrane protein [Xenorhabdus nematophila ATCC
19061]
gi|297630238|emb|CBJ90889.1| putative outer membrane protein [Xenorhabdus nematophila ATCC
19061]
Length = 161
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 60/186 (32%), Gaps = 33/186 (17%)
Query: 2 IKELGL---SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
K + + +S C + L
Sbjct: 3 KKRSFMFVCTFIGTLFLSACQNKGGLTAEQITT--------------------------L 36
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ G + + + V F + L + L+ +A++L+K + HT
Sbjct: 37 KQQGF--QQTDEGWLFGMSEKVLFGNNQSHLRPEGEAKLKELASVLSKVGIHHARLDGHT 94
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D+ G + N +S +RA+ + + G ++ RG PI N + GR N+R
Sbjct: 95 DNYGEVSYNNQLSLKRANTVAD-ALTDGGMQRANLTTRGLGPSQPIADNRSSKGRAENRR 153
Query: 178 IEIQIF 183
+ I I
Sbjct: 154 VAIVIT 159
>gi|270285686|ref|ZP_06195080.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum
Nigg]
gi|270289694|ref|ZP_06195996.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum
Weiss]
gi|301337081|ref|ZP_07225283.1| peptidoglycan-associated lipoprotein [Chlamydia muridarum
MopnTet14]
Length = 188
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 14/167 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC A K + + + F D E++ +
Sbjct: 32 GCDSARPRKSSFGFVPFYSDEEIQQAFVEDFDSKEEQLYKTSAQST------------SF 79
Query: 77 PVHVSFVSEVFLE-KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
++ + L +L + L K P T + I+ HTD G NL + RA+
Sbjct: 80 RNITFATDSYSIKGEDNLTILASLVRHLRKSPKTTLYIEGHTDERGAAAYNLALGARRAN 139
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+K YLI++G++S+R ++ + ++P+ + ++ Q N+R E +I
Sbjct: 140 AVKQYLIKQGIASDRLFTIS-YGKEHPVHSGHNELAWQQNRRTEFKI 185
>gi|15835503|ref|NP_297262.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum
Nigg]
gi|7190917|gb|AAF39684.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum
Nigg]
Length = 202
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 14/167 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC A K + + + F D E++ +
Sbjct: 46 GCDSARPRKSSFGFVPFYSDEEIQQAFVEDFDSKEEQLYKTSAQST------------SF 93
Query: 77 PVHVSFVSEVFLE-KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
++ + L +L + L K P T + I+ HTD G NL + RA+
Sbjct: 94 RNITFATDSYSIKGEDNLTILASLVRHLRKSPKTTLYIEGHTDERGAAAYNLALGARRAN 153
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+K YLI++G++S+R ++ + ++P+ + ++ Q N+R E +I
Sbjct: 154 AVKQYLIKQGIASDRLFTIS-YGKEHPVHSGHNELAWQQNRRTEFKI 199
>gi|111115105|ref|YP_709723.1| flagellar motor protein MotB [Borrelia afzelii PKo]
gi|216263787|ref|ZP_03435781.1| flagellar motor apparatus [Borrelia afzelii ACA-1]
gi|110890379|gb|ABH01547.1| flagellar motor rotation protein B [Borrelia afzelii PKo]
gi|215979831|gb|EEC20653.1| flagellar motor apparatus [Borrelia afzelii ACA-1]
Length = 260
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 14/162 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE-KKFLPMLQL 98
+ ++ +K+ EF ++Q I+V + I + F S ++ + +Q
Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIIVRQEERGIVISLAADAFFDSASADVKLEDNRDSIQK 150
Query: 99 IATIL--NKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQ-----RGV 146
IA+ + I+ HTD+ G KNN +S R+ + +++
Sbjct: 151 IASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKNNWELSVARSVNMLEHILNYLDQSNVK 210
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
S V GF PI T+DT GR N+RI+I I ++
Sbjct: 211 SIENKFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTDASL 252
>gi|115359322|ref|YP_776460.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115284610|gb|ABI90126.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 224
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L L + + T + + HTDS+G NL +S+ RA+ +
Sbjct: 119 DALFATGLATLTPAARASLDKLLSEREDRTYTQVTVTGHTDSVGNDAANLALSKRRAETV 178
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++ + + +SV G P+ +N T GR +N+R++I +
Sbjct: 179 -AGYLKAHGLNAQTVSVSGRGSADPVASNATAEGRASNRRVDISL 222
>gi|116329778|ref|YP_799497.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116332660|ref|YP_802377.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116122671|gb|ABJ80564.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116127527|gb|ABJ77619.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 363
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
V + + + K+ P L ++ + + S + I HT GT N +S R
Sbjct: 254 IESKVIHFEKNSIQIRKEAKPGLNRLSRWMKEDSSIRVKIFGHTSLEGTEAANQRVSLLR 313
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A+ ++ YL S V PI N + G++ N+R+E++I
Sbjct: 314 AETVRDYLAGN-GISKDRFEVIPKGASVPIGDNSKEEGKEMNRRVELRI 361
>gi|46581013|ref|YP_011821.1| chemotaxis MotB protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120601691|ref|YP_966091.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|46450434|gb|AAS97081.1| chemotaxis MotB protein, putative [Desulfovibrio vulgaris str.
Hildenborough]
gi|120561920|gb|ABM27664.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
gi|311234697|gb|ADP87551.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
Length = 243
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 6/133 (4%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ +S + + + + L + +L + IL ++ + +
Sbjct: 99 MADATPQSASGISADDVGVQLRVNSDIMYAPGSAELAPEGAKVLDDVIRILKEY-NLYLV 157
Query: 113 IQSHTDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++ HTDS +N +S RA Y+I G + +A P++ N +
Sbjct: 158 VRGHTDSGEPRNSIYPSNWELSGARAAAAVRYIITHGEIKPTRLRSIAYADTRPLEPNTS 217
Query: 169 KVGRQNNQRIEIQ 181
R N+R+E
Sbjct: 218 PDSRAKNRRVEFY 230
>gi|54307864|ref|YP_128884.1| hypothetical protein PBPRA0661 [Photobacterium profundum SS9]
gi|46912290|emb|CAG19082.1| hypothetical protein PBPRA0661 [Photobacterium profundum SS9]
Length = 439
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 51/140 (36%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFP 107
K + Q +++ + D I + + F S ++ P+L IA L
Sbjct: 294 KIQQLLQSEVERGLLEFEEHADRIRIVLNSNDLFASGSNEVKASIAPILSKIAHTLESTN 353
Query: 108 STVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
I I HTD +N +S RA + + L R G P
Sbjct: 354 G-RIMIVGHTDDKPIFTSKYPSNWHLSLARATAVANVLAMGTELRGRLW-PEGQGDANPR 411
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
+ N +K R +N+R+EI +
Sbjct: 412 NPNTSKANRASNRRVEIDLL 431
>gi|326798576|ref|YP_004316395.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326549340|gb|ADZ77725.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 462
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 7/168 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM-QLQDTGIVVS-RIGDMITCY- 75
L R ++ TD DK + Q+ +G + D
Sbjct: 296 ALKQRVSALESTVQALSTDSDGDGVADKFDKCPNTPAGTQVDGSGCPIKFPEPDTTALST 355
Query: 76 --IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
P L+ P L +++ L + ++ + GT + N + +R
Sbjct: 356 GSYPNIQFEFDSSVLKTSSYPTLDQVSSDLRA-SGATLTLEGNASEEGTTEYNYQLGLDR 414
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
A+ +K+ + + I+V P+ +N T+ GRQ N+ ++ +
Sbjct: 415 ANSVKN-YLVNSGVAASQINVVSNGETKPVASNATEEGRQLNRNVQFK 461
>gi|317407132|gb|EFV87132.1| chemotaxis motB protein [Achromobacter xylosoxidans C54]
Length = 218
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 55/154 (35%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + I+ + ++ L+ + +L+ +
Sbjct: 58 QEETQRRQTLEHALAAPLAAGRVTLINGRIGIS---GSVLFALNSDQLQPEGREVLKSLI 114
Query: 101 TILNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRF 151
L+ + ++ + TD + +N +S +RA + LI +
Sbjct: 115 EPLSAYLKANDEILMVSGFTDDQQVREGNRRFADNWDLSAQRALTVTRALIDE-GVPSSL 173
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+ +N + GR N+R+EI P+
Sbjct: 174 VFAAAFGAEQPVASNADEEGRAKNRRVEIMPLPK 207
>gi|254482517|ref|ZP_05095756.1| peptidoglycan-associated lipoprotein, putative [marine gamma
proteobacterium HTCC2148]
gi|214037208|gb|EEB77876.1| peptidoglycan-associated lipoprotein, putative [marine gamma
proteobacterium HTCC2148]
Length = 174
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V L + L + + + ++ HTD GT + N+ + + RA+
Sbjct: 72 NVFYFDYDSYNLNPDAVSALDAHISAMQGN-EANVRLEGHTDERGTREYNMALGERRANA 130
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ Y++ S+ I + + PI + N+R+E++
Sbjct: 131 VRDYMVVN-GVSSYRIETVSYGEERPIAYGSGESNWAQNRRVELK 174
>gi|114764496|ref|ZP_01443721.1| flagellar motor protein [Pelagibaca bermudensis HTCC2601]
gi|114543063|gb|EAU46082.1| flagellar motor protein [Roseovarius sp. HTCC2601]
Length = 634
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 54/158 (34%), Gaps = 14/158 (8%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ + + + + GD + E L + I
Sbjct: 479 AEDLERYRSEFFGRLREVI-GDQDGIRIEGDRFVFS-SEVLFAPGEARLSPLGEGEIANI 536
Query: 100 ATILNKFP-------STVIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQRGVS 147
A IL + ++ + HTD +N +SQ RA + +L++
Sbjct: 537 AGILQRVMSDIPPGIDWILRVDGHTDDTPLRPGARFADNWELSQARALSVVRFLVEDMGI 596
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ +S GF P+D D+ R N+RIE+++ R
Sbjct: 597 PPQRLSANGFGEYQPVDPADSPEARAQNRRIELKLTER 634
>gi|42527533|ref|NP_972631.1| OmpA family protein [Treponema denticola ATCC 35405]
gi|41818118|gb|AAS12542.1| OmpA family protein [Treponema denticola ATCC 35405]
Length = 1338
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 13/135 (9%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVF-------LEKKFLPMLQLIATILNKFPSTVIAIQS 115
I+V R GD + +P + + + K +L+ IA ILNKFP + ++
Sbjct: 1205 ILVIRDGDKLKIAVPSIIFRANAADFEGLDKAIVDKNKSILKRIAVILNKFPEYQVQVEG 1264
Query: 116 HTDSIGTLKNN-----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
H ++ + L +S++RA+ ++ +LI + + +S G P+ + + +
Sbjct: 1265 HANTTTGTEKEETTALLPLSKQRAEAVRQFLI-KEGLKSSRLSSIGMGSSKPVASLNDRD 1323
Query: 171 GRQNNQRIEIQIFPR 185
N+R+E + +
Sbjct: 1324 NWWKNRRVEFILIKQ 1338
>gi|46015011|pdb|1OAP|A Chain A, Mad Structure Of The Periplasmique Domain Of The
Escherichia Coli Pal Protein
Length = 109
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + + + F ML A L PS + ++ H D GT + N+ + + RA+
Sbjct: 5 NIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANA 64
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +Q S IS+ + + P + N+R +
Sbjct: 65 V-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLV 108
>gi|289803197|ref|ZP_06533826.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 128
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + + + F ML A L PS + ++ H D GT + N+ + + RA+
Sbjct: 24 NIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANA 83
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +Q S IS+ + + P + N+R +
Sbjct: 84 V-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 127
>gi|119952965|ref|YP_945174.1| outer membrane protein [Borrelia turicatae 91E135]
gi|119861736|gb|AAX17504.1| outer membrane protein [Borrelia turicatae 91E135]
Length = 385
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + + I + + + + KK L+ IA +L KF I I+ HT
Sbjct: 263 DSINIEKNENGIKLSLDIE-FYPDSFQIIKKEYNKLKHIANLLEKFKDNNILIEGHTAKF 321
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + +S++RA I +YL++ V + I +G+ K P N + + N+R+EI
Sbjct: 322 GTEQEMQELSEKRAHSIGNYLLKMKVKNKNQIFFKGWGAKKPKYANSSPLA-SKNRRVEI 380
Query: 181 QIFPR 185
I
Sbjct: 381 TILNN 385
>gi|289208253|ref|YP_003460319.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288943884|gb|ADC71583.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 272
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ G+ V I + F + L+ + +L + +L++ I ++
Sbjct: 136 EQAPQGVEVVEHPGRTELRIQDEILFASGQADLQPEGRMLLAQLEPLLDEHDGL-ITVEG 194
Query: 116 HTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
HTD+I N +S RA + YL+ + + G A P+ +NDT G
Sbjct: 195 HTDNIPIATERFPSNWELSSARASGVVRYLLDQ-GLEAERLRAVGRADTQPVASNDTARG 253
Query: 172 RQNNQRIEIQI 182
R N+R+ + +
Sbjct: 254 RSENRRVALIL 264
>gi|254457162|ref|ZP_05070590.1| outer membrane protein, putative [Campylobacterales bacterium GD 1]
gi|207085954|gb|EDZ63238.1| outer membrane protein, putative [Campylobacterales bacterium GD 1]
Length = 195
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 73/198 (36%), Gaps = 21/198 (10%)
Query: 2 IKELGLSMFIMTTI--SGCGLASR----EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+K+ ++ +T + SGC + + K TD + LDKA + +
Sbjct: 1 MKQFFITTLFITLVFFSGCSSKVDIILLPQADGSVGKLIVTDNGKEVI---LDKAWQKVE 57
Query: 56 MQLQD-----TGIVVSRIGDMITCYIPVH------VSFVSEVFLEKKFLPMLQLIATILN 104
+ D + V + +P + + + ++ I +
Sbjct: 58 ISNLDKKEILSKESVQNEYKTLLDEMPKEAKNYRLYFKFDSSDMTSESIATIEKIIKDIE 117
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I + +TD G N ++S +RA + ++ +++ IS+ + PI
Sbjct: 118 ANNILQIDVIGYTDRAGKAAYNKVLSMKRAKNVIK-VLTDNGVNSKIISLDYYGEANPII 176
Query: 165 TNDTKVGRQNNQRIEIQI 182
D V ++ N+R+EI +
Sbjct: 177 ETDDGVAKKRNRRVEITL 194
>gi|254461106|ref|ZP_05074522.1| peptidoglycan-associated lipoprotein [Rhodobacterales bacterium
HTCC2083]
gi|206677695|gb|EDZ42182.1| peptidoglycan-associated lipoprotein [Rhodobacteraceae bacterium
HTCC2083]
Length = 172
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 18/177 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MI + L + + ++ C S + + + + G + D F Q
Sbjct: 3 MITKAVL-LTSVLALAACSNKSDFVGDDVVDLNAGANTGFEGTGGANDPTSVAFFQQSVG 61
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + V L + +L L I+ H D
Sbjct: 62 DRV----------------LFEVDTSTLTGQGRLILDGQTRWLTTNSDYTAIIEGHADEQ 105
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + + RA+ ++ YL+ +GV S+R + V + + PI+ + N+R
Sbjct: 106 GTREYNVALGERRANEVRDYLVSKGVPSSR-LRVVSYGKERPIEICSQEGCYAKNRR 161
>gi|183222805|ref|YP_001840801.1| hypothetical protein LEPBI_I3466 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|167781227|gb|ABZ99525.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 461
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ +V ++ + + + L+ + L I L++ + I HTD
Sbjct: 336 KQENLVQKKLEETKKISLDSVYFERASSVLKSESSIPLDSIVDYLHENSDQKMKIIGHTD 395
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT +N+++S+ERA+ +K YL+ +GV NR ++ G P+ + + N+R
Sbjct: 396 LTGTYDDNMVLSKERAESVKQYLVSKGVDPNRLVT-EGKGPTQPMVQGTDEASSKKNRRT 454
Query: 179 EIQIFP 184
E +
Sbjct: 455 EFVLLN 460
>gi|189912837|ref|YP_001964392.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167777513|gb|ABZ95814.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
Length = 423
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ +V ++ + + + L+ + L I L++ + I HTD
Sbjct: 298 KQENLVQKKLEETKKISLDSVYFERASSVLKSESSIPLDSIVDYLHENSDQKMKIIGHTD 357
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT +N+++S+ERA+ +K YL+ +GV NR ++ G P+ + + N+R
Sbjct: 358 LTGTYDDNMVLSKERAESVKQYLVSKGVDPNRLVT-EGKGPTQPMVQGTDEASSKKNRRT 416
Query: 179 EIQIFP 184
E +
Sbjct: 417 EFVLLN 422
>gi|313205367|ref|YP_004044024.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312444683|gb|ADQ81039.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 446
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I ++ + S+ + ++ L+ + +L P+ + I HT + GT KNNL I RA
Sbjct: 337 TITINFTQNSDKTIHEEA-DKLKELTDMLKANPNQCLQITGHTCNWGTRKNNLRIGLRRA 395
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +KS LI++G + + + P+ N ++V R+ N+R+EI++
Sbjct: 396 NSVKSKLIKQGAPAKKIFT-ESKGEAEPLVPNTSEVNRKKNRRVEIKVV 443
>gi|56708795|ref|YP_164836.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
gi|56680480|gb|AAV97145.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
Length = 180
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 47/134 (35%), Gaps = 6/134 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D AE ++ G V R G + + + L+ +
Sbjct: 50 DGAEGFMTPHVRRDGTPVCRRGALCGTMPADQFFATDSYRISSEGQARLRQ---FFQETG 106
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I HTDS + NL +S RA+ + G R + VRG+ + P N
Sbjct: 107 ANGYIITGHTDSRASDAYNLRLSVNRANSVARVGRATG---ARIVDVRGYGERDPRVPNT 163
Query: 168 TKVGRQNNQRIEIQ 181
+ N+R+EI
Sbjct: 164 SAANMAQNRRVEII 177
>gi|320539138|ref|ZP_08038809.1| peptidoglycan-associated outer membrane lipoprotein [Serratia
symbiotica str. Tucson]
gi|320030776|gb|EFW12784.1| peptidoglycan-associated outer membrane lipoprotein [Serratia
symbiotica str. Tucson]
Length = 169
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 50/164 (30%), Gaps = 17/164 (10%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + SS ++A + Q ++ +
Sbjct: 22 CSSNKSANADQSGMGAGTGIENGSSNLSSEEQARLQMQELQKENTV-------------- 67
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + F +L AT L S + ++ H D GT + N+ + + RA+ +
Sbjct: 68 --YFGLDKYDVSADFAQILDAHATFLRNNASYKVTVEGHADERGTPEYNIALGERRANSV 125
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+Q IS+ + + P N+R +
Sbjct: 126 -KMYLQGKGVLADQISIVSYGKEKPAVLGHDAAAYAKNRRAVLV 168
>gi|15594625|ref|NP_212414.1| flagellar motor protein MotB [Borrelia burgdorferi B31]
gi|195941366|ref|ZP_03086748.1| flagellar motor protein MotB [Borrelia burgdorferi 80a]
gi|216264425|ref|ZP_03436417.1| flagellar motor apparatus [Borrelia burgdorferi 156a]
gi|218249216|ref|YP_002374803.1| flagellar motor apparatus [Borrelia burgdorferi ZS7]
gi|221217732|ref|ZP_03589200.1| flagellar motor apparatus [Borrelia burgdorferi 72a]
gi|223888999|ref|ZP_03623590.1| flagellar motor apparatus [Borrelia burgdorferi 64b]
gi|224533159|ref|ZP_03673759.1| flagellar motor apparatus [Borrelia burgdorferi WI91-23]
gi|224533695|ref|ZP_03674283.1| flagellar motor apparatus [Borrelia burgdorferi CA-11.2a]
gi|225549020|ref|ZP_03769995.1| flagellar motor apparatus [Borrelia burgdorferi 94a]
gi|225550090|ref|ZP_03771050.1| flagellar motor apparatus [Borrelia burgdorferi 118a]
gi|226320581|ref|ZP_03796141.1| flagellar motor apparatus [Borrelia burgdorferi 29805]
gi|226321598|ref|ZP_03797124.1| flagellar motor apparatus [Borrelia burgdorferi Bol26]
gi|1165265|gb|AAA85604.1| MotB [Borrelia burgdorferi]
gi|1185054|gb|AAB58963.1| flagellar motor apparatus [Borrelia burgdorferi]
gi|2688186|gb|AAC66668.1| flagellar motor rotation protein B (motB) [Borrelia burgdorferi
B31]
gi|215980898|gb|EEC21705.1| flagellar motor apparatus [Borrelia burgdorferi 156a]
gi|218164404|gb|ACK74465.1| flagellar motor apparatus [Borrelia burgdorferi ZS7]
gi|221192409|gb|EEE18628.1| flagellar motor apparatus [Borrelia burgdorferi 72a]
gi|223885815|gb|EEF56914.1| flagellar motor apparatus [Borrelia burgdorferi 64b]
gi|224511886|gb|EEF82287.1| flagellar motor apparatus [Borrelia burgdorferi WI91-23]
gi|224512988|gb|EEF83351.1| flagellar motor apparatus [Borrelia burgdorferi CA-11.2a]
gi|225369202|gb|EEG98655.1| flagellar motor apparatus [Borrelia burgdorferi 118a]
gi|225370246|gb|EEG99684.1| flagellar motor apparatus [Borrelia burgdorferi 94a]
gi|226232787|gb|EEH31540.1| flagellar motor apparatus [Borrelia burgdorferi Bol26]
gi|226234000|gb|EEH32721.1| flagellar motor apparatus [Borrelia burgdorferi 29805]
gi|312147980|gb|ADQ30639.1| flagellar motor apparatus [Borrelia burgdorferi JD1]
gi|312149596|gb|ADQ29667.1| flagellar motor apparatus [Borrelia burgdorferi N40]
Length = 260
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 14/162 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE-KKFLPMLQL 98
+ ++ +K+ EF ++Q IVV + I + F S ++ ++ +Q
Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIVVRQEERGIVISLAADAFFDSASADVKLEENRDSIQK 150
Query: 99 IATIL--NKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSN-- 149
IA+ + I+ HTD+ G K+N +S R+ + +++ S+
Sbjct: 151 IASFIGFLSPRGYNFKIEGHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQSDVK 210
Query: 150 ---RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
V GF PI T+DT GR N+RI+I I ++
Sbjct: 211 RIENNFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTDASL 252
>gi|304311123|ref|YP_003810721.1| Flagellar motor protein MotB [gamma proteobacterium HdN1]
gi|301796856|emb|CBL45068.1| Flagellar motor protein MotB [gamma proteobacterium HdN1]
Length = 359
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 64/164 (39%), Gaps = 9/164 (5%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDE----FQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ + S+L K +E Q+++Q+ + V + + + IP +V F
Sbjct: 105 DDVEPGAARQGDHQDQQTSALSKLSEEMASRLQVEIQNADVKVVQRSEWLEVSIPSNVLF 164
Query: 83 VS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
S L +L I+ +L + ++ TD++ + E + + +
Sbjct: 165 ASASANLSADAARLLGKISEVLKP-ADYSVQVEGFTDNVPIRTEQFPSNWELSAARAAAV 223
Query: 142 IQRG---VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ + ++ G+A + + N T GR N+RI I +
Sbjct: 224 VRLFVLGGVNPARLAAIGYADQRALGDNATAEGRALNRRINIIV 267
>gi|171319575|ref|ZP_02908672.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5]
gi|171095186|gb|EDT40181.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5]
Length = 133
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 1/108 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++ +F +LQ A L PS + IQ +TD GT + NL + Q R
Sbjct: 25 LAKRSIYFDFDQYSVKPEFQSLLQSHADYLRNHPSRRVLIQGNTDERGTSEYNLALGQRR 84
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + S ++ + + P+ + N+R ++
Sbjct: 85 SQAVMS-ALETLGVQATQLEAVSLGKEKPVALGHDEDSWAQNRRADLV 131
>gi|238797533|ref|ZP_04641031.1| OmpA family protein [Yersinia mollaretii ATCC 43969]
gi|238718674|gb|EEQ10492.1| OmpA family protein [Yersinia mollaretii ATCC 43969]
Length = 168
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 48/140 (34%), Gaps = 2/140 (1%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ E LQ+ G ++ G + L + +Q I L
Sbjct: 29 QAKPQGLSAEQIAALQEQGFKLTDNGWEFGL-ANKVLFDSDVKKLNPDGVRTVQNIGKAL 87
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
T + + HTDS G N +S +RA + + I VRG P+
Sbjct: 88 TAVGITHLRVDGHTDSTGEDSYNQQLSYQRAAAVAD-TLALIGIPRANIDVRGRGKLDPV 146
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
N T GR N+R+ + +
Sbjct: 147 ADNRTAKGRAENRRVSMIVT 166
>gi|255594982|ref|XP_002536202.1| conserved hypothetical protein [Ricinus communis]
gi|223520472|gb|EEF26178.1| conserved hypothetical protein [Ricinus communis]
Length = 113
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ +E L P + + +L++ +I ++ HTD++GT + N +S+ RA +
Sbjct: 1 VLFNFNESSLRPDAGPAIARVVVVLSRTQKPMI-VEGHTDNVGTREYNQQLSEARAKSVA 59
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++R S I++ G+A+ P+ NDT GR N+R EI +
Sbjct: 60 NE-LERRGISASRITLVGYAFDRPVADNDTPEGRARNRRTEIVV 102
>gi|108757075|ref|YP_633305.1| OmpA family protein [Myxococcus xanthus DK 1622]
gi|17863963|gb|AAL46989.1|AF448145_1 unknown [Myxococcus xanthus]
gi|108460955|gb|ABF86140.1| OmpA family protein [Myxococcus xanthus DK 1622]
Length = 249
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+E L L +A + P + + H D GT + NL +S RA +K Y
Sbjct: 150 FGFNESGLSADAQQRLSDLAQCMKTAPG-RVTLAGHADERGTEEYNLQLSNRRAASVKRY 208
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L GV +++ +V G+ P+++ ++ N+R+E Q
Sbjct: 209 LTDLGVPASQLGTV-GYGETRPVNSASSEDAWSENRRVEFQ 248
>gi|256026544|ref|ZP_05440378.1| Outer membrane porin F [Fusobacterium sp. D11]
Length = 391
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
S + + + + F + + + +L+ +A +L + I HTDS K
Sbjct: 279 SIEANSLLITLDSGILFDVDKYDVRPEAEEVLKNLAIVLKEADIKAFEIDGHTDSDAGDK 338
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+N ++S+ RA+ +K++L +G+++ I+++G+ PI +NDT G+Q I +
Sbjct: 339 HNQILSENRANAVKNFLTSQGITAE--ITIKGYGKTRPIASNDTPEGKQK-----IVVL 390
>gi|221209446|ref|ZP_03582427.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
gi|221170134|gb|EEE02600.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
Length = 159
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 61/180 (33%), Gaps = 25/180 (13%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
G ++ + +GC A + + L+ G
Sbjct: 5 GATLLGVLLSAGCHTAPPHRG-----------------------LTETQVTTLKSAGFKE 41
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ G P + L+ +++ I L+ + + +TD G
Sbjct: 42 TEQGFEFGAAGP-ILFDFDRYNLKPDVRRIVERIGRTLHSAGIDGVRVYGYTDDEGADGY 100
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+L +S+ RA+V+ L+ R I++ G P+ N VGR N+R I + PR
Sbjct: 101 DLELSRRRAEVVAIELVD-VGLDARRIAIVGRGKHDPVGDNRMPVGRAQNRRAAIVVSPR 159
>gi|188592172|ref|YP_001796770.1| hypothetical protein RALTA_B0336 [Cupriavidus taiwanensis LMG
19424]
gi|170938546|emb|CAP63533.1| Putative transmembrane protein, OmpA/MotB motif [Cupriavidus
taiwanensis LMG 19424]
Length = 215
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 68/197 (34%), Gaps = 18/197 (9%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + + G+ + + ++ + + E L +
Sbjct: 22 LMSVLLGAFVLVLLGVIGVQMELSARLEAEVKQ--RQEEAQRRETLEKALAGPLAAGRVT 79
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF---PSTVIAIQSHTDSIG 121
+ I+ + ++ L+ + +L+ +A L+ + ++ + TD
Sbjct: 80 LVNGRIGIS---GSVLFALNSAELQPEGRDLLRSLAQPLSAYLRSRDEILMVSGFTDDQQ 136
Query: 122 TLK------NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ +N +S +RA + LI G+ + S F + P+ N R N
Sbjct: 137 VREGNRRFADNWELSAQRALTVTRTLIDAGIPPSSVFSAA-FGSQQPVTPNADAASRAKN 195
Query: 176 QRIEIQIFPR---GNIK 189
+R+EI PR G +K
Sbjct: 196 RRVEISPVPRVTTGTVK 212
>gi|224532213|ref|ZP_03672845.1| flagellar motor apparatus [Borrelia valaisiana VS116]
gi|224511678|gb|EEF82084.1| flagellar motor apparatus [Borrelia valaisiana VS116]
Length = 260
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 14/162 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE-KKFLPMLQL 98
+ ++ +K+ EF ++Q I+V + I + F S ++ + +Q
Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIIVRQEERGIVISLAADAFFDSASADVKLEDNRDSIQK 150
Query: 99 IATIL--NKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQ-----RGV 146
IA+ + I+ HTD+ G KNN +S R+ + +++
Sbjct: 151 IASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKNNWELSTARSVNMLEHILNYLDQSNVK 210
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
S V GF PI T+DT GR N+RI+I I ++
Sbjct: 211 SIENKFEVAGFGGSRPIATDDTPEGRAYNRRIDILITTDASL 252
>gi|114766590|ref|ZP_01445546.1| OmpA family protein [Pelagibaca bermudensis HTCC2601]
gi|114541206|gb|EAU44258.1| OmpA family protein [Roseovarius sp. HTCC2601]
Length = 194
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 67/194 (34%), Gaps = 24/194 (12%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL------------------ 47
L++ T + G + + L+ + +
Sbjct: 4 ALALACATAVGVSGPVAADSDGAALNTPVISTQNTRTIRGERYVPGISLSPDGCEIWVMD 63
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D AE ++ G V R ++ + ++ K L+ N
Sbjct: 64 DGAEGYAVSRMTPDGRPVCRDINVCGTLNTDQYFATDKYYISPKGKARLEE---FFNSAT 120
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I HTD+ +++ N +S RA+ + S + R I VRG+ +YP+ TN
Sbjct: 121 AFGFIIAGHTDARASIEYNRRLSYNRANAVASVAR---GTGARIIDVRGYGEEYPVATNR 177
Query: 168 TKVGRQNNQRIEIQ 181
T G N+R+EI
Sbjct: 178 TVEGMAKNRRVEIL 191
>gi|108810029|ref|YP_653945.1| putative lipoprotein [Yersinia pestis Antiqua]
gi|108810484|ref|YP_646251.1| lipoprotein [Yersinia pestis Nepal516]
gi|145600441|ref|YP_001164517.1| lipoprotein [Yersinia pestis Pestoides F]
gi|165927314|ref|ZP_02223146.1| ompA family protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165936533|ref|ZP_02225101.1| ompA family protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166009010|ref|ZP_02229908.1| ompA family protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212007|ref|ZP_02238042.1| ompA family protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167418991|ref|ZP_02310744.1| ompA family protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426023|ref|ZP_02317776.1| ompA family protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|270487963|ref|ZP_06205037.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294502545|ref|YP_003566607.1| lipoprotein [Yersinia pestis Z176003]
gi|108774132|gb|ABG16651.1| lipoprotein [Yersinia pestis Nepal516]
gi|108781942|gb|ABG16000.1| putative lipoprotein [Yersinia pestis Antiqua]
gi|145212137|gb|ABP41544.1| lipoprotein [Yersinia pestis Pestoides F]
gi|165915649|gb|EDR34258.1| ompA family protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165920776|gb|EDR38024.1| ompA family protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992349|gb|EDR44650.1| ompA family protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206753|gb|EDR51233.1| ompA family protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166962985|gb|EDR59006.1| ompA family protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167054946|gb|EDR64746.1| ompA family protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|270336467|gb|EFA47244.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294353004|gb|ADE63345.1| lipoprotein [Yersinia pestis Z176003]
Length = 165
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 51/140 (36%), Gaps = 2/140 (1%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ + LQ+ G ++ G + L + + +Q I IL
Sbjct: 26 QAKPQGLTPDQIAALQEQGFKLTDNGWEFGL-ANKVLFDSDVKKLNSEGMQTVQKIGRIL 84
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + + HTDS+G N +S +RA + L I VRG P+
Sbjct: 85 SDVGIKHMRVDGHTDSVGKDDYNQQLSYQRALAVADTLAT-VGIPKSNIDVRGRGKLEPV 143
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
N T GR N+R+ I I
Sbjct: 144 ADNRTSKGRAENRRVAIIIT 163
>gi|30314426|gb|AAP15422.1| outer membrane lipoprotein precursor [Burkholderia ambifaria]
gi|30314428|gb|AAP15423.1| outer membrane lipoprotein precursor [Burkholderia ambifaria]
gi|30314452|gb|AAP15435.1| outer membrane lipoprotein precursor [Burkholderia ambifaria]
Length = 149
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Query: 61 TGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + D ++ ++ P++Q A L P + IQ +TD
Sbjct: 26 AQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDE 85
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + Q+RA+ ++ + GV+ ++ +V + P + + N+R +
Sbjct: 86 RGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVS-LGKEKPQASGHDEASWAQNRRAD 144
Query: 180 IQ 181
+
Sbjct: 145 LV 146
>gi|313676000|ref|YP_004053996.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312942698|gb|ADR21888.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 228
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ G + E + + + G + ++ S+ + + L +
Sbjct: 85 ESEGYITIEEEIAVKEDMDQLVFSLMPSGAGAILRLDIN-FKQSKAEILENSYGELDKLL 143
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
++ ++P+ I ++ HTD G+ N+ +S++R + +KSYL + VSS+R I + F
Sbjct: 144 NMMKEYPNMEIQLEGHTDFRGSASANMRLSEKRVNAVKSYLTSKNVSSDR-IKTKAFGGT 202
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P+ T+ + NN+R+E +I
Sbjct: 203 QPLSRESTEEAKLNNRRVEARIL 225
>gi|330443988|ref|YP_004376974.1| peptidoglycan-associated lipoprotein [Chlamydophila pecorum E58]
gi|328807098|gb|AEB41271.1| peptidoglycan-associated lipoprotein [Chlamydophila pecorum E58]
Length = 189
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 5/139 (3%)
Query: 51 EDEFQMQLQDTGIVVSRIGD---MITCYIPVHVSFVSEVFLE-KKFLPMLQLIATILNKF 106
++E + + T ++ ++ L +L + + K
Sbjct: 52 DEELNQPFSLKAVDSQEEQNYKSASTPTFRNITFETDSYSIKGEENLSILTTLVHHMKKS 111
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
P + I+ HTD G NL + RA+ +K+YLI++G+S+ R ++ + ++P +
Sbjct: 112 PKVTLYIEGHTDERGAASYNLALGSRRANAVKNYLIKQGISAERLFTIS-YGKEHPRNPG 170
Query: 167 DTKVGRQNNQRIEIQIFPR 185
++ Q N+R E +I+ R
Sbjct: 171 HDELAWQQNRRTEFKIYAR 189
>gi|308049357|ref|YP_003912923.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307631547|gb|ADN75849.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 354
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 40/106 (37%), Gaps = 3/106 (2%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L L L I L ++P + IQ DS G + NL +S RA
Sbjct: 245 RELHFGFDSSELTD--LSPLSDIIERLLRYPDAQVFIQGFADSTGRSQYNLSLSHRRAQA 302
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL + I + F + P+ N T R N+R+ + I
Sbjct: 303 VADYLQSQ-GVEPDRIRIEDFGERLPVIDNATAEHRAQNRRVHLYI 347
>gi|296271167|ref|YP_003653799.1| OmpA/MotB domain-containing protein [Thermobispora bispora DSM
43833]
gi|296093954|gb|ADG89906.1| OmpA/MotB domain protein [Thermobispora bispora DSM 43833]
Length = 176
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 66 SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+++GD T I V F + L + + +A L V+ ++ HTD++G+
Sbjct: 53 TQVGDRTTVSISSDVLFAFDKADLTEVAKRRIAELAKRLQNVKG-VVLVEGHTDALGSAA 111
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRI 178
NL +S+ RA+ +K L + I G+ PI N D GR N+R+
Sbjct: 112 YNLRLSRLRANAVKEELSKA--VPGLQIKAVGYGETRPIAPNKTKDGKDNPEGRAKNRRV 169
Query: 179 EI 180
I
Sbjct: 170 TI 171
>gi|282853319|ref|ZP_06262656.1| OmpA family protein [Propionibacterium acnes J139]
gi|282582772|gb|EFB88152.1| OmpA family protein [Propionibacterium acnes J139]
gi|314922410|gb|EFS86241.1| OmpA family protein [Propionibacterium acnes HL001PA1]
gi|314965447|gb|EFT09546.1| OmpA family protein [Propionibacterium acnes HL082PA2]
gi|314982607|gb|EFT26699.1| OmpA family protein [Propionibacterium acnes HL110PA3]
gi|315091130|gb|EFT63106.1| OmpA family protein [Propionibacterium acnes HL110PA4]
gi|315094263|gb|EFT66239.1| OmpA family protein [Propionibacterium acnes HL060PA1]
gi|327329241|gb|EGE71001.1| putative outer membrane protein A [Propionibacterium acnes
HL103PA1]
Length = 363
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 55/147 (37%), Gaps = 3/147 (2%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D+ ++ + V++ I + + ++ ++
Sbjct: 216 DLAGVDVSKFVNALVTTTGDASDASRERVTKESMKIDLDA-SVLFDLDSDVVKPAGRQII 274
Query: 97 QLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
A L S I + +TD+ G+ +NL +S+ RA + L + ++
Sbjct: 275 DRTAKQLVARKVSGKIEVTGYTDNSGSASHNLDLSRRRAASVAKVLGSQLSKGITLVTA- 333
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ +ND++ GR N+R+ I +
Sbjct: 334 GKGEADPVASNDSEAGRCLNRRVTITV 360
>gi|255264472|ref|ZP_05343814.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62]
gi|255106807|gb|EET49481.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62]
Length = 227
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 64/175 (36%), Gaps = 7/175 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + C R + + + I N FG+S + +
Sbjct: 8 KFVLLSATAIALIACSGGDRRAAAASVGREAGSFIDNGDFGNS--TMNNTLIQ--SGQRV 63
Query: 64 VVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+G T + V+F L++ +L+ A + +FP + HTD +G
Sbjct: 64 YTINLGRRFTQEVSPSVTFPFNSNALDENARAVLRQQADWIRQFPEVRFKVYGHTDLVGG 123
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
N + RA + YL +G+S +R +V F P+ + + R N+R
Sbjct: 124 TAYNRQLGLRRAQAVVIYLTSQGISRSRLEAVASFGETRPVIQTNGQERR--NRR 176
>gi|145579534|pdb|2HQS|H Chain H, Crystal Structure Of TolbPAL COMPLEX
gi|145579536|pdb|2HQS|C Chain C, Crystal Structure Of TolbPAL COMPLEX
gi|145579538|pdb|2HQS|E Chain E, Crystal Structure Of TolbPAL COMPLEX
gi|145579540|pdb|2HQS|G Chain G, Crystal Structure Of TolbPAL COMPLEX
gi|223673846|pdb|2W8B|C Chain C, Crystal Structure Of Processed Tolb In Complex With Pal
gi|223673847|pdb|2W8B|E Chain E, Crystal Structure Of Processed Tolb In Complex With Pal
gi|223673848|pdb|2W8B|G Chain G, Crystal Structure Of Processed Tolb In Complex With Pal
gi|223673849|pdb|2W8B|H Chain H, Crystal Structure Of Processed Tolb In Complex With Pal
Length = 118
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + + + F ML A L PS + ++ H D GT + N+ + + RA+
Sbjct: 6 NIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANA 65
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +Q S IS+ + + P + N+R +
Sbjct: 66 V-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLV 109
>gi|323492645|ref|ZP_08097789.1| OmpA/MotB domain-containing protein [Vibrio brasiliensis LMG 20546]
gi|323313020|gb|EGA66140.1| OmpA/MotB domain-containing protein [Vibrio brasiliensis LMG 20546]
Length = 323
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 77 PVHVSFVSEVFLEKK--FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
++ + Q I +L K+P + + + HTD+ GT N +S+ RA
Sbjct: 207 NAIYFDTDSYAIDGEWVVEKKAQRIICLLRKYPESKVDLIGHTDAEGTADYNQNLSEHRA 266
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++L+ + ++ + IS++G P +N T R N+R+E+++
Sbjct: 267 QAVANWLMTKDIAQEQ-ISLQGVGDTQPASSNLTPESRALNRRVEMEL 313
>gi|319786952|ref|YP_004146427.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
gi|317465464|gb|ADV27196.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
Length = 216
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 61/145 (42%), Gaps = 13/145 (8%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--- 106
E + L D + + + I + ++ L+ + +L+ +A L ++
Sbjct: 65 LEQALAVPLADGRVTL--VDGRIGIR-GNVLFALNSDQLQPEGRQVLRSLAAPLARYLEA 121
Query: 107 PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
V+ + TD + +N +S +RA + LI+ GV ++ + F +
Sbjct: 122 GEQVLMVSGFTDDRPVHEGNRRFADNWELSAQRALTVTRALIEEGVPADSVFAAA-FGAQ 180
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPR 185
P+ ND + GR N+R+EI PR
Sbjct: 181 QPVSPNDDEEGRARNRRVEIAPIPR 205
>gi|296410006|gb|ADH15779.1| OmpP6 [Haemophilus influenzae]
Length = 145
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 60/174 (34%), Gaps = 31/174 (17%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + ++ C ++ + + G S+ +
Sbjct: 1 KSLLVAGSVAALAACSSSNND--------AAGNGAAQTFGGYSVADLQQ----------- 41
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + +++ +L A LN P+ + ++ +TD GT
Sbjct: 42 -----------RYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTP 90
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N+ + Q RAD +K YL +GV + + +V + + P + N+R
Sbjct: 91 EYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 143
>gi|46201868|ref|ZP_00208284.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 262
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 73 TCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLIS 130
+ F S+ + K ++ I+ +++ + I + HTDS G NL +S
Sbjct: 16 RVSFSNQIFFDSDSDRILKSGESVIGAISRLISADQTKPHIMVIGHTDSSGGDLYNLELS 75
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ RA+ + + L+ + + I + G P+ +N T G+ N+R+E I R +I
Sbjct: 76 RRRAEAVAAQLVLQ-GVPHEHIQLVGMGKSQPVASNSTAAGKAQNRRVEFLISARRDI 132
>gi|289764553|ref|ZP_06523931.1| outer membrane porin F [Fusobacterium sp. D11]
gi|289716108|gb|EFD80120.1| outer membrane porin F [Fusobacterium sp. D11]
Length = 311
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
S + + + + F + + + +L+ +A +L + I HTDS K
Sbjct: 199 SIEANSLLITLDSGILFDVDKYDVRPEAEEVLKNLAIVLKEADIKAFEIDGHTDSDAGDK 258
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+N ++S+ RA+ +K++L +G+++ I+++G+ PI +NDT G+Q I +
Sbjct: 259 HNQILSENRANAVKNFLTSQGITAE--ITIKGYGKTRPIASNDTPEGKQK-----IVVL 310
>gi|77464239|ref|YP_353743.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1]
gi|126463081|ref|YP_001044195.1| OmpA domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
gi|221640123|ref|YP_002526385.1| OmpA domain-containing protein [Rhodobacter sphaeroides KD131]
gi|332559128|ref|ZP_08413450.1| OmpA domain protein precursor [Rhodobacter sphaeroides WS8N]
gi|77388657|gb|ABA79842.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1]
gi|126104745|gb|ABN77423.1| OmpA domain protein [Rhodobacter sphaeroides ATCC 17029]
gi|221160904|gb|ACM01884.1| OmpA domain protein precursor [Rhodobacter sphaeroides KD131]
gi|332276840|gb|EGJ22155.1| OmpA domain protein precursor [Rhodobacter sphaeroides WS8N]
Length = 182
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + L L + L I I+ H D GT + NL + RA
Sbjct: 72 DRVFFTVDQSTLNDAARATLDTQSQWLMSNADYAIIIEGHADEQGTREYNLALGARRASA 131
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
++ YLI +G++ +R +V + + P++ T+ N+R + + G
Sbjct: 132 VQDYLISKGIAPSRMKTVS-YGKERPVEVCSTEACYSKNRRA-VTVLSMG 179
>gi|320158759|ref|YP_004191137.1| outer membrane protein ImpK/VasF, OmpA/MotB domain [Vibrio
vulnificus MO6-24/O]
gi|319934071|gb|ADV88934.1| outer membrane protein ImpK/VasF OmpA/MotB domain [Vibrio
vulnificus MO6-24/O]
Length = 442
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 7/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ + +++ + V + D + + L P++ +A L
Sbjct: 290 NQIQRSLATEIEMGLLKVDALPDRVRITFQSNDLFESGSAELVAHIFPVVSKVARALEAT 349
Query: 107 PSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
I + HTD+ + N +S RA + L G S R I G P
Sbjct: 350 NG-KILVVGHTDNNPIFTSKFPSNWHLSLARATALTDRLASAGKLSGRVI-PEGMGEARP 407
Query: 163 IDTNDTKVGRQNNQRIEIQIF 183
+ +N+T GR N+R+EI +
Sbjct: 408 LVSNETAEGRSINRRVEIDLL 428
>gi|84500462|ref|ZP_00998711.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
gi|84391415|gb|EAQ03747.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
Length = 309
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 10/159 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
+ + T +A+ E L+ G VV +
Sbjct: 158 QGGGAPVEPEATGDATGPDAPEEPEADAELIDVLRTAGHVV----------LDDLDFQSG 207
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L + L +A + P+ ++A+ HTD++G N+ +S+ RA+ ++ LI R
Sbjct: 208 AAALADREYTSLAELAVYIKGDPARIVALVGHTDAVGAHDANVALSRRRAEAVRQRLIDR 267
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +S RG + P+ +N T +GR+ N+R+E +
Sbjct: 268 HGVAGSQVSARGAGFLAPVASNLTALGRERNRRVEAVLL 306
>gi|325102935|ref|YP_004272589.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324971783|gb|ADY50767.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 668
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + D + + + K P L + + K P I +++HTDS G
Sbjct: 528 EVEKAEDAYLVKLNNIYYDFDKYTIRKDAEPELNKVLAFMKKMPYVNIELRAHTDSRGKA 587
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRI 178
N+L+S+ RA+ K +L+ G +R + +GF ++ TK Q N+R
Sbjct: 588 SYNMLLSENRANSAKLFLLNGGADGSRLL-AKGFGETQLLNHCKDGVKCTKEEHQLNRRT 646
Query: 179 EIQIFPRGNIK 189
E ++ ++
Sbjct: 647 EFKVIKINPVQ 657
>gi|118591925|ref|ZP_01549320.1| possible outer membrane protein OprF [Stappia aggregata IAM 12614]
gi|118435568|gb|EAV42214.1| possible outer membrane protein OprF [Stappia aggregata IAM 12614]
Length = 194
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 12/181 (6%)
Query: 5 LGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQDTG 62
L++ + + G + ++ D S+ K E F+ +
Sbjct: 16 TVLALMVGLMLPVGVSAQTVTPDQIIKALLPDG---GAPKSRSMRKQEPHPFRGISIEGQ 72
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSI 120
+ + I + L + LQ + L + I HTD
Sbjct: 73 LPPEVVLPRINLTVN---FEFDSASLTNDGILTLQALGQALQDPRLKNMRFQIAGHTDLR 129
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT NL +S+ RA ++ +L + G+ P+D + GR N+R+EI
Sbjct: 130 GTADYNLDLSKRRAFMVAEFLAAFYTIPRGQLVPVGYGESRPVDPGNPSSGR--NRRVEI 187
Query: 181 Q 181
Sbjct: 188 I 188
>gi|190893274|ref|YP_001979816.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
CIAT 652]
gi|190698553|gb|ACE92638.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
CIAT 652]
Length = 178
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 69 GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
T + + F + L A L ++P+ I ++ H D GT + NL
Sbjct: 60 AQDFTVNVGDRIFFDTDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADERGTREYNL 119
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ RA K YL RGV + R ++ + + P+ D N+R
Sbjct: 120 ALGARRAAAAKDYLASRGVPAQRMKTIS-YGKERPVAVCDDISCWSQNRR 168
>gi|162455833|ref|YP_001618200.1| OmpA-like domain-containing protein [Sorangium cellulosum 'So ce
56']
gi|161166415|emb|CAN97720.1| OmpA-like outer membrane domain protein [Sorangium cellulosum 'So
ce 56']
Length = 689
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 46/121 (38%), Gaps = 3/121 (2%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGT 122
V + I + + + ++Q +A L P T+I +Q H D
Sbjct: 545 SVVIEENNIVI-LEKIQFATGSAEILPESFGIVQAVAETLKHHPEFTMIEVQGHADERSA 603
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NL ++Q RAD + + + + + G+ PID + N+R+E ++
Sbjct: 604 DAYNLKLTQARADA-VAAALAQRGVNKNSVRSMGYGEYCPIDPAHNAAAWEKNRRVEFKV 662
Query: 183 F 183
Sbjct: 663 V 663
>gi|116329523|ref|YP_799243.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116329838|ref|YP_799556.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116122267|gb|ABJ80310.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116123527|gb|ABJ74798.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 684
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 4/141 (2%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIV---VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ ++ + Q + GIV + D+ Y ++ + + +L
Sbjct: 540 ATAPKYISESINIIQKNIPKNGIVTIYLRAENDVNPIYNLRVYFEFNKTKITNENKKLLD 599
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ L K S I I HTD++ + + N +S +RA + Y + + S + + +R +
Sbjct: 600 PLVDYLLKNASDKIEIGGHTDNVASKEYNTRLSAKRARNVYEYFLSK-GISEKRMKIRAY 658
Query: 158 AYKYPIDTNDTKVGRQNNQRI 178
Y P N+T++GR N+R+
Sbjct: 659 WYSQPDADNETEIGRAKNRRV 679
>gi|190574725|ref|YP_001972570.1| hypothetical protein Smlt2808 [Stenotrophomonas maltophilia K279a]
gi|190012647|emb|CAQ46275.1| putative OmpA family membrane protein [Stenotrophomonas maltophilia
K279a]
Length = 212
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 67/189 (35%), Gaps = 17/189 (8%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L + + G E + + KR L E L + +
Sbjct: 25 VLLGAFVLILVGVVAVQLELSQRLDQEVKQRQAEAKR----LQTLEQALAGPLAAGRVTL 80
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV---IAIQSHTDSIGT 122
+ I + ++ L+ + +L+ +A L + + + + TD
Sbjct: 81 --VDGRIGIS-GSVLFALNSDQLQPEGQELLRSLAAPLAAYLGSREEILMVSGFTDDAPV 137
Query: 123 LK------NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+ +N +S +R+ + LI GV ++ + F + P+ +N + GR N+
Sbjct: 138 REGNRRFADNWELSAQRSLTVTRTLIADGVPADAVFAAA-FGSEQPVSSNANEEGRARNR 196
Query: 177 RIEIQIFPR 185
R+EI P+
Sbjct: 197 RVEIAPIPK 205
>gi|120435916|ref|YP_861602.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
gi|117578066|emb|CAL66535.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
Length = 281
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 6/142 (4%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
+ + I +S ++ + + F + + P+L+ +A ++N P+
Sbjct: 123 LKQNISEGADEDDIDISVDETVVMINVSDKLLFGSGSYRVTGEAQPLLKKLAEVINSEPA 182
Query: 109 TVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ I+ HTD LK+N +S RA I L + + G + P+
Sbjct: 183 MEVMIEGHTDDRTMVTESYLKDNWDLSVRRATSIVRVLQDKYNVEPSKLIAAGRSSYQPL 242
Query: 164 DTNDTKVGRQNNQRIEIQIFPR 185
N K N+R I I P
Sbjct: 243 VENSNKDNMAKNRRTRIVIIPN 264
>gi|167648381|ref|YP_001686044.1| peptidoglycan-associated lipoprotein [Caulobacter sp. K31]
gi|167350811|gb|ABZ73546.1| peptidoglycan-associated lipoprotein [Caulobacter sp. K31]
Length = 185
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ D + + + P L A LN++P+ + I+ + D GT + NL
Sbjct: 67 VQDFVINIGERIYFDTDQYDIRSDAQPTLAAQAQWLNRYPAVRVRIEGNADERGTREYNL 126
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+ RA+ ++ +L+ +GVS +R I + + PID + N+
Sbjct: 127 ALGARRANAVREFLVAQGVSGSR-IETLSYGKEKPIDGGSGEESWAKNR 174
>gi|30314430|gb|AAP15424.1| outer membrane lipoprotein precursor [Burkholderia cepacia]
Length = 150
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 55/165 (33%), Gaps = 19/165 (11%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYI 76
C + K + + T + V + D
Sbjct: 1 CKSGVKLDDKANIAGAVSTQPSADNVAQ-----------------VNVDPLNDPNSPLAK 43
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + ++Q A L P + IQ +TD GT + NL + Q+RA+
Sbjct: 44 RSIYFDFDSYSVKDDYQSLMQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEA 103
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ + GV+ ++ +V + P T + N+R ++
Sbjct: 104 VRRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147
>gi|30314416|gb|AAP15417.1| outer membrane lipoprotein precursor [Burkholderia stabilis]
Length = 150
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 50/165 (30%), Gaps = 19/165 (11%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYI 76
C + K + T + V + D
Sbjct: 1 CKSGVKLDDKANNAGAVSTQPSADNVAQ-----------------VNVDPLNDPNSPLAK 43
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + ++Q A L P + IQ +TD GT + NL + Q+RA+
Sbjct: 44 RSIYFDFDSYSVKDDYQSLMQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEA 103
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ + ++ + + P T + N+R ++
Sbjct: 104 VRRAMAL-PGVNDSQMEAVSLGKEKPQATGHDEASWAQNRRADLV 147
>gi|161520167|ref|YP_001583594.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|160344217|gb|ABX17302.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
Length = 185
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 25/180 (13%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
G ++ + +GC A + + L+ G
Sbjct: 31 GATLLGVLLSAGCHTAPPHRG-----------------------LTETQVTTLKSAGFKE 67
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ G P + L+ +++ I L+ + + +TD GT
Sbjct: 68 TEQGFEFGAAGP-ILFDFDRYNLKPDVRRIVERIGRTLHSAGIDGVRVYGYTDDEGTDGY 126
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+L +S+ RA+V+ L+ R I++ G P+ N VGR N+R I + PR
Sbjct: 127 DLELSRRRAEVVAIELVD-VGLDARRIAIVGRGKHDPVGDNRMPVGRAQNRRAAIVVSPR 185
>gi|332534695|ref|ZP_08410524.1| OmpA/MotB domain protein [Pseudoalteromonas haloplanktis ANT/505]
gi|332035845|gb|EGI72328.1| OmpA/MotB domain protein [Pseudoalteromonas haloplanktis ANT/505]
Length = 432
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 5/159 (3%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQDTGIVV-SRIGDMITCYIPVHVSFVS 84
+ + TD + D + +G + S I IP
Sbjct: 275 ETDTTADSFTDDDGDGVPNEQDTCPSTPLSTNVDLSGCTIYSASTSNIEIGIP---FSAD 331
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ +++ + +A L + P+ + IQ H G K N +S++RA + LI++
Sbjct: 332 SSDVRSQYIQEISRLADFLKENPTKQVEIQGHASLDGDRKYNRKLSEKRAFAVAEILIKQ 391
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + G+ P + N+RIE I
Sbjct: 392 FDVEPKRVKSFGYGIDQPRVNEISVRANAANRRIEAVIT 430
>gi|260590691|ref|ZP_05856149.1| lipoprotein PG3 [Prevotella veroralis F0319]
gi|260537352|gb|EEX19969.1| lipoprotein PG3 [Prevotella veroralis F0319]
Length = 256
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
+DK E QL + + + + + F + L L +A +
Sbjct: 105 MDKVAREAAQQLPNASVDKVTDANGLECVKVTFDSGILFPLNGSDLNAAAKNDLTKLAGL 164
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ + + +AIQ +TD+ G K N+ +SQ RA + SYL +GV+S + SV GF + P
Sbjct: 165 MKRNSNCDVAIQGYTDASGNDKINIPLSQRRASSVSSYLQNQGVTSRQIRSVEGFGSQNP 224
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
I N T Q N+R+E+ +
Sbjct: 225 I-ENKTVS--QKNRRVEVYL 241
>gi|218516473|ref|ZP_03513313.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
8C-3]
Length = 170
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 69 GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
T + + F + L A L ++P+ I ++ H D GT + NL
Sbjct: 52 AQDFTVNVGDRIFFDTDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADERGTREYNL 111
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ RA K YL RGV + R ++ + + P+ D N+R
Sbjct: 112 ALGARRAAAAKDYLASRGVPAQRMKTIS-YGKERPVAVCDDISCWSQNRR 160
>gi|86747898|ref|YP_484394.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86570926|gb|ABD05483.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 464
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 1/134 (0%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
KAE + V + + ++K +L + + P
Sbjct: 331 KAELSVKPAASPVDASVCQQLFDDLLGKSTVRFESASATIDKDSAGLLDRLIETAMRCPG 390
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I + HTDS G N +S++RA + Y++ R + G+ + P+ ND+
Sbjct: 391 ASIEVAGHTDSDGEAGFNQALSEKRARAVVDYMV-RAGLTPERFQAFGYGSRIPLAGNDS 449
Query: 169 KVGRQNNQRIEIQI 182
G+ N+RI+ I
Sbjct: 450 DAGKAKNRRIDFVI 463
>gi|154247009|ref|YP_001417967.1| peptidoglycan-associated lipoprotein [Xanthobacter autotrophicus
Py2]
gi|154161094|gb|ABS68310.1| Peptidoglycan-associated lipoprotein [Xanthobacter autotrophicus
Py2]
Length = 164
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 3/118 (2%)
Query: 70 DMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ V F + L + L A L ++ I+ H D GT + N+
Sbjct: 47 QEFVVAVGDRVFFESDQTDLTPQARATLDRQAQWLQQWNRYTFTIEGHADERGTREYNIA 106
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ +RA ++ YL RG+ R ++ + + P+ + N+R + + G
Sbjct: 107 LGAKRAQSVRDYLAARGIDPARMRTIS-YGKERPVAVCNDISCWSQNRRA-VTVLNAG 162
>gi|307825895|ref|ZP_07656110.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307733014|gb|EFO03876.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 313
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 57/169 (33%), Gaps = 7/169 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ S + + + + I
Sbjct: 142 ATETATNSIATSTNSKQAAANLTEETELQQQLTKAIDEFGLNKAVNIKVNQGYAQLEIQD 201
Query: 79 HVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQER 133
V F S L +L+ + +L + I I+ HTD+I +N + R
Sbjct: 202 KVLFKSSEADLTASGGALLKRLMPLLKQSVGL-ILIEGHTDNIPIKTAQFPSNWELGASR 260
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A + +L+ + + S+R ++ +A PI N T G++ N+R+ I I
Sbjct: 261 ATSVLHFLVLQQLDSSRLRAIT-YADTMPIADNSTPEGKEKNRRVNILI 308
>gi|258621934|ref|ZP_05716964.1| outer membrane protein, putative [Vibrio mimicus VM573]
gi|258585872|gb|EEW10591.1| outer membrane protein, putative [Vibrio mimicus VM573]
Length = 212
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 73/197 (37%), Gaps = 16/197 (8%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT------- 61
+ + + + + H+ ++ D + + +D+ + +
Sbjct: 7 ALPLILFTASSSSFANQGEYLQHEGDEYDYRPTPLANQVADLKDDDNDGVINARDLCPDT 66
Query: 62 --GIVVSRIGDMITCYIPV-----HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
G + G + +E FL ++ +A L +PST I +Q
Sbjct: 67 PRGSEIDNDGCGTFIKSSQMQQLHILFANDSSVIEPAFLTQIRQMAEFLQGYPSTSIELQ 126
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ +G + NL +S++R++ ++ LI R + +++ G+ + + +
Sbjct: 127 GYASKVGRAEYNLALSKQRSETVRDQLI-RYGVAPNRVNIVGYGDSVLVAEGEDDISHAR 185
Query: 175 NQRIEIQIFP-RGNIKK 190
N+R+ + +G + K
Sbjct: 186 NRRVTATVVGYKGEVVK 202
>gi|310767498|gb|ADP12448.1| OmpA family protein [Erwinia sp. Ejp617]
Length = 407
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/194 (12%), Positives = 57/194 (29%), Gaps = 18/194 (9%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSN-------------DTDIVNKRFGSSLDKAED 52
L+ +T + GC + S ++ S D
Sbjct: 199 LLACICVTVLIGCTIFSAMNWRLGRAAEPLLRQIWQTPLPQLPGSKHGAVSQISFD-LRQ 257
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV- 110
+ + ++ D +P + L + ++ +A+ + T+
Sbjct: 258 RLSDLIASHQLNITDGDDGNKVILPIDSLFSPPGAELTPEGRALIARVASAMESLKGTLL 317
Query: 111 --IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ + +N S +A I + ++Q + G + N++
Sbjct: 318 IAVYTDNRLLPSTQFMSNDEYSAAQAQAIGTMMLQLIAQPCINVRAEGRGDSQGLLPNNS 377
Query: 169 KVGRQNNQRIEIQI 182
R N+R+EI +
Sbjct: 378 ASNRTQNRRVEITL 391
>gi|296126061|ref|YP_003633313.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
gi|296017877|gb|ADG71114.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
Length = 266
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 16/179 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
S+ + + G S+DKA + +++ + V +
Sbjct: 79 SQSKLVYGGANADTLPSTDRGYSMGRSIDKAVAVLEAEIKSKKVRVEEDERGFVISLGAD 138
Query: 80 VSFVSEVFLEKKFLPMLQ---LIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQE 132
F S ++ +A++L+ P+ I I+ HTDS G++ +
Sbjct: 139 QYFESASTNIIDSQNNVETFIKLASLLSGIPN-EIRIEGHTDSGSIIPGSITEQKFGNNW 197
Query: 133 RADVIKSYLIQRGVSSN--------RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++ +I + N S+ G+A P+ +ND GR N+R++I I
Sbjct: 198 GLSSARAMVILEKLFENDQTAKLDRNKYSIAGYADTRPVASNDLPDGRALNRRVDIVIV 256
>gi|171322883|ref|ZP_02911587.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171091749|gb|EDT37280.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 222
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 69/221 (31%), Gaps = 41/221 (18%)
Query: 2 IKELGLSMFIM-TTISGCGLASREKKKVFLHKSNDT----DIVNKRFGSSLDKAEDEFQM 56
+ +L L++ + ++ C AS + D + S +
Sbjct: 1 MNKLALALALSTMAVAACSTASGPTFSASELQPRDGVRTFQVDCHGLLSGPQTCMKAARK 60
Query: 57 QLQDTGIVVSRIGDMIT----------------------------------CYIPVHVSF 82
D + + + F
Sbjct: 61 ICGDQPVRTVDSARALRDGSDPATLVFQCGAAPAEAASAAEPAPAPAAVEHVNLAGDALF 120
Query: 83 VSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ L L + + T + + HTDS+G NL +S+ RA+ + +
Sbjct: 121 ATGLATLTPAARASLDKLLSEREDRTYTQVTVIGHTDSVGNDAANLTLSKRRAETV-AGY 179
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ + + +SV G P+ +N T GR +N+R++I +
Sbjct: 180 LKSHGLNAQTVSVSGRGSADPVASNATPDGRASNRRVDISL 220
>gi|30314444|gb|AAP15431.1| outer membrane lipoprotein precursor [Burkholderia pyrrocinia]
Length = 149
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Query: 61 TGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + D ++ ++ P++Q A L P + IQ +TD
Sbjct: 26 AQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDE 85
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + Q+RA+ ++ + GV+ ++ +V + P T + N+R +
Sbjct: 86 RGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRAD 144
Query: 180 IQ 181
+
Sbjct: 145 LV 146
>gi|89890263|ref|ZP_01201773.1| putative outer membrane protein [Flavobacteria bacterium BBFL7]
gi|89517178|gb|EAS19835.1| putative outer membrane protein [Flavobacteria bacterium BBFL7]
Length = 571
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 6/124 (4%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + + + + ++ P L + + P I I SHTDS G+
Sbjct: 446 LEEADCGKAIALKNILYDLDKYYIRADAEPELNRLVQFMKDNPGVRIEISSHTDSRGSNA 505
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIE 179
N +SQ RA + Y+ +G+ +NR + + G+ ++ + Q N+R E
Sbjct: 506 YNKTLSQNRASAARDYIASQGIDANRVVGI-GYGETRLLNRCADGIECSAAEHQINRRTE 564
Query: 180 IQIF 183
+++
Sbjct: 565 MKVI 568
>gi|86136455|ref|ZP_01055034.1| flagellar motor protein [Roseobacter sp. MED193]
gi|85827329|gb|EAQ47525.1| flagellar motor protein [Roseobacter sp. MED193]
Length = 791
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 61/175 (34%), Gaps = 14/175 (8%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K+ + + + + L + V GD +
Sbjct: 619 EAEAAELASKAESLETKAQDLERYRSEFFGRLRN-LLGSQEGVRIEGDRFVF-ASEVLFA 676
Query: 83 VSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDSIGT-----LKNNLLIS 130
L + + +A IL + +I + HTD+ +N +S
Sbjct: 677 SGSADLSRAGEGEVAKVAQILQSVAAEIPPELNWIIRVDGHTDNTAMAGSEKYSDNWELS 736
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
Q RA + ++I+ + ++ GF P++T+DT R N+RIE++ R
Sbjct: 737 QGRALSVVRFMIENLGIAPDRLAANGFGEFQPVNTDDTPEARAQNRRIELKFTER 791
>gi|126463889|ref|YP_001045002.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126105700|gb|ABN78230.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 453
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTV--IAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + + P++ +A +L + V + + HTD++ ++N S +
Sbjct: 341 LFRSARAEVNPDYAPLVASVAAVLAENRELVGAVRVIGHTDNVPVQRSNPFASNQGLSEA 400
Query: 138 KSYLIQRG----VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ + ++ G A P+ N T+ GR N+R+EI+I R
Sbjct: 401 RAATLAALLVEGGVPAGIVTAEGHADTEPVADNATRAGRAQNRRVEIRIEKR 452
>gi|171911103|ref|ZP_02926573.1| outer membrane protein [Verrucomicrobium spinosum DSM 4136]
Length = 479
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L + L ++A+IL PS + I HTD+ G+ + N+ +SQ RA +K
Sbjct: 370 YFEYDQAVLHPRAQAQLNIVASILKASPSKNLKIGGHTDAKGSDQYNVALSQRRAAAVKQ 429
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQI 182
Y + + + GF P+ N D GR N+R EI +
Sbjct: 430 YFLDQ-GVPPLQVETVGFGKALPLSPNANPDGSDNPEGRSRNRRAEILL 477
>gi|154244796|ref|YP_001415754.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus
Py2]
gi|154158881|gb|ABS66097.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2]
Length = 340
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 49/139 (35%), Gaps = 13/139 (9%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---STV 110
+ V +GD + L L +A + P S
Sbjct: 204 ILGNRPDVRVVGDRFVFQ-SEVFFDRGSATPRPEALAELDKLAGAILDLEKSIPPDISWA 262
Query: 111 IAIQSHTDSIGTLKNN----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ I HTD+ +S RA + YLI +GVS I+ GF PID
Sbjct: 263 LRIDGHTDNRPIATPQFPSNWELSAARAIAVVQYLISKGVSPQHLIAA-GFGEYQPIDPA 321
Query: 167 DTKVGRQNNQRIEIQIFPR 185
+ R N+RIE+++ R
Sbjct: 322 ASDEARARNRRIELKLTER 340
>gi|22127605|ref|NP_671028.1| outer membrane protein [Yersinia pestis KIM 10]
gi|45443467|ref|NP_995006.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001]
gi|150260516|ref|ZP_01917244.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|153949584|ref|YP_001402443.1| ompA family protein [Yersinia pseudotuberculosis IP 31758]
gi|162419496|ref|YP_001605396.1| ompA family protein [Yersinia pestis Angola]
gi|167401635|ref|ZP_02307129.1| ompA family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167468843|ref|ZP_02333547.1| ompA family protein [Yersinia pestis FV-1]
gi|170025832|ref|YP_001722337.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
YPIII]
gi|218927645|ref|YP_002345520.1| putative lipoprotein [Yersinia pestis CO92]
gi|229836972|ref|ZP_04457137.1| putative lipoprotein [Yersinia pestis Pestoides A]
gi|229840332|ref|ZP_04460491.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229842412|ref|ZP_04462567.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India
195]
gi|229900672|ref|ZP_04515796.1| putative lipoprotein [Yersinia pestis Nepal516]
gi|21960714|gb|AAM87279.1|AE013976_7 putative outer membrane protein [Yersinia pestis KIM 10]
gi|45438336|gb|AAS63883.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001]
gi|115346256|emb|CAL19127.1| putative lipoprotein [Yersinia pestis CO92]
gi|149289924|gb|EDM40001.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|152961079|gb|ABS48540.1| ompA family protein [Yersinia pseudotuberculosis IP 31758]
gi|162352311|gb|ABX86259.1| ompA family protein [Yersinia pestis Angola]
gi|167049017|gb|EDR60425.1| ompA family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|169752366|gb|ACA69884.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
gi|229682011|gb|EEO78103.1| putative lipoprotein [Yersinia pestis Nepal516]
gi|229690722|gb|EEO82776.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India
195]
gi|229696698|gb|EEO86745.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229705915|gb|EEO91924.1| putative lipoprotein [Yersinia pestis Pestoides A]
gi|262360575|gb|ACY57296.1| putative lipoprotein [Yersinia pestis D106004]
gi|262364521|gb|ACY61078.1| putative lipoprotein [Yersinia pestis D182038]
gi|320016989|gb|ADW00561.1| putative lipoprotein [Yersinia pestis biovar Medievalis str. Harbin
35]
Length = 168
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 51/140 (36%), Gaps = 2/140 (1%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ + LQ+ G ++ G + L + + +Q I IL
Sbjct: 29 QAKPQGLTPDQIAALQEQGFKLTDNGWEFGL-ANKVLFDSDVKKLNSEGMQTVQKIGRIL 87
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + + HTDS+G N +S +RA + L I VRG P+
Sbjct: 88 SDVGIKHMRVDGHTDSVGKDDYNQQLSYQRALAVADTLAT-VGIPKSNIDVRGRGKLEPV 146
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
N T GR N+R+ I I
Sbjct: 147 ADNRTSKGRAENRRVAIIIT 166
>gi|292488104|ref|YP_003530981.1| putative type VI secretion system core protein [Erwinia amylovora
CFBP1430]
gi|292899316|ref|YP_003538685.1| outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291199164|emb|CBJ46278.1| putative outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291553528|emb|CBA20573.1| putative type VI secretion system, core protein [Erwinia amylovora
CFBP1430]
gi|312172236|emb|CBX80493.1| putative type VI secretion system, core protein [Erwinia amylovora
ATCC BAA-2158]
Length = 407
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/194 (12%), Positives = 56/194 (28%), Gaps = 18/194 (9%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSN-------------DTDIVNKRFGSSLDKAED 52
L+ +T + GC + S ++ S D
Sbjct: 199 LLACICVTVLMGCSIFSALNWRLGRAAEPLLRQIWQTPLPQLPGSKRGAVPQISFD-LRQ 257
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV- 110
+ + V+ +P + L + ++ +A+ + T+
Sbjct: 258 RLSDLIASHQLNVTEGDYGNRVILPADSLFSPPGTELTPEGRALIARVASAMESLKGTLL 317
Query: 111 --IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ + +N S +A I + ++Q + G A + N +
Sbjct: 318 IAVYTDNRLLPSTQFTSNYEYSAAQAQAISNMMMQLIAQPCINVRAEGRADSRELLPNSS 377
Query: 169 KVGRQNNQRIEIQI 182
R N+R+EI +
Sbjct: 378 AHNRAQNRRVEITL 391
>gi|259908602|ref|YP_002648958.1| OmpA family protein [Erwinia pyrifoliae Ep1/96]
gi|224964224|emb|CAX55731.1| OmpA family protein [Erwinia pyrifoliae Ep1/96]
gi|283478573|emb|CAY74489.1| putative type VI secretion system, core protein [Erwinia pyrifoliae
DSM 12163]
Length = 407
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/194 (12%), Positives = 57/194 (29%), Gaps = 18/194 (9%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSN-------------DTDIVNKRFGSSLDKAED 52
L+ +T + GC + S ++ S D
Sbjct: 199 LLACICVTVLIGCTIFSAMNWRLGRAAEPLLRQIWQTPLPQLPGSKYGAVSQISFD-LRQ 257
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV- 110
+ + ++ D +P + L + ++ +A+ + T+
Sbjct: 258 RLSDLIASHQLNITDGDDGNKVILPIDSLFSPPGAELTPEGRALIARVASAMESLKGTLL 317
Query: 111 --IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ + +N S +A I + ++Q + G + N++
Sbjct: 318 IAVYTDNRLLPSTQFMSNDEYSAAQAQAIGTMMLQLIAQPCINVRAEGRGDSQGLLPNNS 377
Query: 169 KVGRQNNQRIEIQI 182
R N+R+EI +
Sbjct: 378 ASNRTQNRRVEITL 391
>gi|193212308|ref|YP_001998261.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB
8327]
gi|193085785|gb|ACF11061.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB
8327]
Length = 108
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + L+ A + + S + + H D GT + N+ + + RA+
Sbjct: 2 LGDIFFDFDRSIITPESQAQLRDNAEWMAQNKSKSLVCEGHCDERGTAEYNMALGERRAE 61
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
K L+ GVS +R +S + + P + N+R+
Sbjct: 62 SAKESLMSLGVSGDR-LSTISYGEEKPFAIGHDEAAWSQNRRVHFV 106
>gi|189219501|ref|YP_001940142.1| Outer membrane protein or related peptidoglycan-associated
(lipo)protein [Methylacidiphilum infernorum V4]
gi|189186359|gb|ACD83544.1| Outer membrane protein or related peptidoglycan-associated
(lipo)protein [Methylacidiphilum infernorum V4]
Length = 528
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATIL--NKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
L+ K +Q +A L + + + TD++G+ NL +S ERA
Sbjct: 420 DIRFRFGTAELDNKGRVDIQRLARFLSEAENSDKGVLLIGFTDNVGSHTYNLGLSLERAQ 479
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ L RG+ ++V G + P+ +N+++ GR+ N+R+E+ + P+
Sbjct: 480 SVAKALESRGI---TVVNVAGAGEEMPVASNESEEGREKNRRVEVWLCPKKK 528
>gi|311106822|ref|YP_003979675.1| OmpA family protein 2 [Achromobacter xylosoxidans A8]
gi|310761511|gb|ADP16960.1| OmpA family protein 2 [Achromobacter xylosoxidans A8]
Length = 216
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 60/154 (38%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ + E L + + I I + ++ L+ + +L+ +
Sbjct: 56 QVETQRRETLEQALAGPLAAGRVTL--IDGRIGIS-GSVLFALNSDQLQPEGREVLKSLI 112
Query: 101 TILNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRF 151
L+ + + ++ + +TD + +N +S +RA + LI GV S+
Sbjct: 113 EPLSAYLKSHNEILMVSGYTDDQQVREGNRRFADNWDLSAQRALTVTRALIDEGVPSSAV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+ N + GR N+R+EI P+
Sbjct: 173 FAAA-FGSEQPVAANTDEEGRAKNRRVEIAPIPK 205
>gi|254510741|ref|ZP_05122808.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
gi|221534452|gb|EEE37440.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
Length = 300
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 60/130 (46%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ + ++S +G + EV L + L L+A L P T +A+
Sbjct: 169 IEETADSSAGLLSDLGRDGHVILDDLHFRTGEVALGEGPFASLTLLADYLADNPGTRLAL 228
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
HTD G L+ N+ +S +RA+ +++ LI+ + I +G Y PI +N T GR
Sbjct: 229 VGHTDDTGDLQANIAVSTKRAEAVRARLIETYGVAADRIEAQGVGYLAPITSNATPAGRD 288
Query: 174 NNQRIEIQIF 183
N+R+E +
Sbjct: 289 INRRVEAVLL 298
>gi|254284085|ref|ZP_04959053.1| peptidoglycan-associated lipoprotein [gamma proteobacterium
NOR51-B]
gi|219680288|gb|EED36637.1| peptidoglycan-associated lipoprotein [gamma proteobacterium
NOR51-B]
Length = 180
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 58/178 (32%), Gaps = 6/178 (3%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+L F ++ C ++++ + ++ E Q
Sbjct: 9 KLVAVSFASLILAACSGTDSKEQEAAAAAEAAAAEAAAQQAAAE----AEAQAARAAAMA 64
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
R+ D V L + +L I ++ HTD GT
Sbjct: 65 EQDRLKDAAMAAGSVFYFAFDSSELNDASRMAIDAHIALLL-VSDESIRLEGHTDERGTR 123
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ NL + + RA+ ++ Y++ + I + + PI + N+R+E++
Sbjct: 124 EYNLALGERRANAVRDYMVAN-GVPSYRIETISYGEENPIAFGSGEANWSENRRVELK 180
>gi|123440951|ref|YP_001004940.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|122087912|emb|CAL10700.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 169
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 59/180 (32%), Gaps = 28/180 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + + GC + E LQ+ G
Sbjct: 15 ISFFALCLLVLVGCQAKPHQ------------------------GLTPEQIAALQEQGFK 50
Query: 65 VSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
++ + + V F S+V L + +Q I L+ + + HTD+IG
Sbjct: 51 LT--DNGWVFGLANKVLFDSDVRKLNASGVQTVQNIGRALHNVGINHMRVDGHTDAIGED 108
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA + + I VRG P+ N T GR N+R+ I +
Sbjct: 109 GYNQQLSFQRASAVAD-TLAAIGIPRTNIEVRGRGKLEPVADNRTAKGRAENRRVAIIVT 167
>gi|163755600|ref|ZP_02162719.1| elongation factor P [Kordia algicida OT-1]
gi|161324513|gb|EDP95843.1| elongation factor P [Kordia algicida OT-1]
Length = 281
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 52/141 (36%), Gaps = 11/141 (7%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--- 104
DK + + I G V + + L A L
Sbjct: 148 DKGFAYKFQTMSEERIEAIDKG----IASKVLYAGFGSKTFKPD--NTLNAYAIELKNYL 201
Query: 105 -KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
K P+ + I HTDS G + N Q+RA + +Y + + + +++ PI
Sbjct: 202 AKHPTKHVEIIGHTDSNGEAEANKWFGQQRAKSVMNYFVSQ-GIAAEKLTISSKGETDPI 260
Query: 164 DTNDTKVGRQNNQRIEIQIFP 184
N TK G++ N+RIEI +
Sbjct: 261 APNTTKEGQRLNRRIEINVTN 281
>gi|157369523|ref|YP_001477512.1| peptidoglycan-associated outer membrane lipoprotein [Serratia
proteamaculans 568]
gi|157321287|gb|ABV40384.1| Peptidoglycan-associated lipoprotein [Serratia proteamaculans 568]
Length = 171
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 54/165 (32%), Gaps = 17/165 (10%)
Query: 18 CGL-ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
C S + + T N S ++ +LQ I
Sbjct: 22 CSSNKSANNDQSGMGAGAGTGTENGSSNLSSEEQARLQMQELQKNNI------------- 68
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + + +F ML A L PS + ++ H D GT + N+ + + R++
Sbjct: 69 --VYFGLDKYDVSSEFAQMLDAHAAFLRNNPSYKVTVEGHADERGTPEYNIALGERRSNS 126
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +Q S IS+ + + P + N+R +
Sbjct: 127 V-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 170
>gi|90578134|ref|ZP_01233945.1| putative outer membrane protein [Vibrio angustum S14]
gi|90441220|gb|EAS66400.1| putative outer membrane protein [Vibrio angustum S14]
Length = 196
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 79/193 (40%), Gaps = 11/193 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + +++ + ++ GC L+ + K + A+ + +
Sbjct: 1 MKYV-ITVLLSFSLFGCSLSVPQPPIAKQTKDLFDADSDGVINQRDRCADTPIDAVVDND 59
Query: 62 GIVV---SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G + + I + + + ++ + ++ L K+P T I ++ +
Sbjct: 60 GCPTFVKNSEENNIHV-----LFANDSSEIPESYMENISNMSEFLAKYPKTHIELKGYAS 114
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+G N+ +S+ RA I+ LI GV+ +R ++ GF P+ +D + ++R+
Sbjct: 115 PVGNAAYNVGLSKRRAAAIQQALITEGVAPSRIKTI-GFGDSDPVKASDAEESNTLSRRV 173
Query: 179 EIQIF-PRGNIKK 190
Q+ +GN+ K
Sbjct: 174 VAQVVGSQGNVVK 186
>gi|332561144|ref|ZP_08415462.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
gi|332274942|gb|EGJ20258.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
Length = 453
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTV--IAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + + P++ +A +L + V + + HTD++ ++N S +
Sbjct: 341 LFRSARAEVNPDYAPLVASVAAVLAENRELVGAVRVIGHTDNVPVQRSNPFASNQGLSEA 400
Query: 138 KSYLIQRG----VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ + ++ G A P+ N T+ GR N+R+EI+I R
Sbjct: 401 RAATLAALLVEGGVPAGIVTAEGHADTEPVADNATRAGRAQNRRVEIRIEKR 452
>gi|218885922|ref|YP_002435243.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756876|gb|ACL07775.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 244
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 11/140 (7%)
Query: 53 EFQMQLQDTGIV----VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
E + L TG+ +IT IP V F E L + L+ +A + +
Sbjct: 100 EMRTYLNKTGVEGIIGAVFDEGVITLRIPAEVMFAPGETDLSPQAERYLKPLADLFVRKK 159
Query: 108 STVIAIQSHTD-----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
I I+ TD ++N +S RA + Y + + ++ ++ G P
Sbjct: 160 DQSINIRGFTDDSQPGQNSRFRDNWELSSLRAVSVLRYFL-KAGIDSKRLTATGLGELDP 218
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
+ N T+ R N+R+E +
Sbjct: 219 LFPNTTEENRARNRRVEFML 238
>gi|163750646|ref|ZP_02157883.1| OmpA family protein [Shewanella benthica KT99]
gi|161329641|gb|EDQ00632.1| OmpA family protein [Shewanella benthica KT99]
Length = 388
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 57/148 (38%), Gaps = 2/148 (1%)
Query: 37 DIVNKRFGSSLDKAED-EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
D N +D+ D ++ G + + + ++ +
Sbjct: 233 DSDNDGVTDDMDQCPDTAANHKVDAKGCTIYTETTEQR-DLGSIQFANNSSVVKTESFAH 291
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
++ +AT +NK P + + I H +G N+ +S +RA + L+++ S + +
Sbjct: 292 IEKLATYMNKKPESTVLISGHASDVGKADYNMALSDKRAKAVAKILVEKYGISQDRVEAK 351
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
GF + ++ + N+RIE +
Sbjct: 352 GFGITQAVIQGNSAEANKANRRIEAHVT 379
>gi|316932465|ref|YP_004107447.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315600179|gb|ADU42714.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
Length = 341
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 12/139 (8%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-------T 109
+ + +GD + L + L +A L +
Sbjct: 205 AILGDRPDIRIVGDRFVFQ-SEVFFDTGQALLLPEGRAELDKVADALKELDKQIPAELPW 263
Query: 110 VIAIQSHTDSI---GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
V+ + HTD G ++N +S RA + YL+ RGV + R ++ GFA P+DT
Sbjct: 264 VVRVDGHTDRRPITGAFRSNWELSSARAISVVQYLMSRGVPAQRLVAA-GFAEFQPLDTA 322
Query: 167 DTKVGRQNNQRIEIQIFPR 185
DT+ + N+RIE+++ R
Sbjct: 323 DTEDAYRRNRRIELKLTER 341
>gi|283786435|ref|YP_003366300.1| T6SS protein Cts1U [Citrobacter rodentium ICC168]
gi|282949889|emb|CBG89514.1| T6SS protein Cts1U [Citrobacter rodentium ICC168]
Length = 451
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFP 107
K + +++ + V + F+S ++ + + +++ IA+ + +
Sbjct: 313 KLAVLLRNEIRQQLLSVDENQKQSKVVLKGDALFLSGSVRVQPEMVKVIERIASEVQRVN 372
Query: 108 STVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ I HTD+ + L S++RA + Y I + VRG P+
Sbjct: 373 G-DVLIVGHTDATPISRPGLPNNVALSEKRAAEVAQYFIAA-GLPESKVKVRGVGSSQPV 430
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
T GR N+R+E +
Sbjct: 431 ANEATAQGRAKNRRVEFFVT 450
>gi|30314438|gb|AAP15428.1| outer membrane lipoprotein precursor [Burkholderia cepacia]
gi|30314440|gb|AAP15429.1| outer membrane lipoprotein precursor [Burkholderia stabilis]
gi|30314446|gb|AAP15432.1| outer membrane lipoprotein precursor [Burkholderia vietnamiensis]
Length = 150
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 54/165 (32%), Gaps = 19/165 (11%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYI 76
C + K + T + V + D
Sbjct: 1 CKSGVKLDDKANNAGAVSTQPSADNVAQ-----------------VNVDPLNDPNSPLAK 43
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + ++Q A L P + IQ +TD GT + NL + Q+RA+
Sbjct: 44 RSIYFDFDSYSVKDDYQSLMQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEA 103
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ + GV+ ++ +V + P T + N+R ++
Sbjct: 104 VRRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147
>gi|86131343|ref|ZP_01049941.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85817788|gb|EAQ38956.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 653
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T + + + L+ + ++ ++PS I ++SHTDS N+ +SQ
Sbjct: 536 TLELNPIYFDFDKHNIRPDAALELEKVIAVMREYPSLKIDVRSHTDSRAPDAYNMSLSQR 595
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
R Y++ +G S ++ RG+ + T+ Q N+R E I +
Sbjct: 596 RNVSTIRYIVDQGGISMSRLTGRGYGETQLTNACGNGIECTEEEHQLNRRSEFIIVAK 653
>gi|90418921|ref|ZP_01226832.1| flagellar motor protein [Aurantimonas manganoxydans SI85-9A1]
gi|90337001|gb|EAS50706.1| flagellar motor protein [Aurantimonas manganoxydans SI85-9A1]
Length = 342
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 13/140 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + L++ + +A + + P +
Sbjct: 205 EILSDRENIRIVGDRFVFQ-SEVLFPSGSDVLQEAGTDEMAKLAEAIVALNREIPSDINW 263
Query: 110 VIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+I + HTD S G ++N +S ERA + YLI +GV R ++ GF PID
Sbjct: 264 IIRVDGHTDNVPISGGRFEDNWELSTERAGAVVKYLISQGVPPER-LAATGFGEYQPIDP 322
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
++T R N+RIE ++ R
Sbjct: 323 DNTPEARARNRRIEFKLTER 342
>gi|260574834|ref|ZP_05842836.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259022839|gb|EEW26133.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 190
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 58/185 (31%), Gaps = 24/185 (12%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTD-----------IVNKRFGSSLDKAEDEFQM 56
++ + ++G + + K G LD+
Sbjct: 15 ALALTVGLAGATTVAAQTGPTVAGKIEWGMWVDDDGCQHWWADGGLEGYMLDRVNPR--- 71
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
TG V + + L L + + AI H
Sbjct: 72 ----TGKPVCLKKNTCLVENTDTLFATDSATLTAHGRSFLTQ---FFQQAGAFGYAIYGH 124
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS + + N+ +SQ RA + + G R I GF + PI +N + G Q N+
Sbjct: 125 TDSRASDEYNMRLSQRRAASVANIARSVGAVVEREI---GFGERQPIASNGSASGMQQNR 181
Query: 177 RIEIQ 181
R+E+
Sbjct: 182 RVEVV 186
>gi|224436415|ref|ZP_03657435.1| flagellar motor protein MotB [Helicobacter cinaedi CCUG 18818]
gi|313142933|ref|ZP_07805126.1| flagellar motor protein MotB [Helicobacter cinaedi CCUG 18818]
gi|313127964|gb|EFR45581.1| flagellar motor protein MotB [Helicobacter cinaedi CCUG 18818]
Length = 250
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 74/204 (36%), Gaps = 29/204 (14%)
Query: 4 ELGLSMFIMT-TISGCGLASRE------------------KKKVFLHKSNDTDIVNKRFG 44
L L++FI IS G A E ++ + +
Sbjct: 25 SLLLALFIALWAISSTGSADSEALKTEFVKIFDFTLTSPLPSNQDDINDSEVENESGAIS 84
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLE-KKFLPMLQLIATI 102
+ E Q ++ GI + ++ ++ +P ++ F + LQ + I
Sbjct: 85 QTSSVTTAEIQQMAEEGGI-LEQMEMGLSLRLPSNLFFESGSAEINNSDVYLYLQRMTAI 143
Query: 103 LNKFPST-VIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ K P I ++ +TD+ K+N +S R+ + LI + S IS G
Sbjct: 144 IKKLPDYVKIDVRGYTDNASLPIGSRYKDNYELSSARSLAVMKNLI-KNGISPERISFSG 202
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEI 180
+ + ND+ + R N R+EI
Sbjct: 203 YGEHQAVAPNDSTINRAKNNRVEI 226
>gi|146300670|ref|YP_001195261.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146155088|gb|ABQ05942.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 277
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 6/134 (4%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ D I V+ ++ I + F + K +L +A ++N P ++ H
Sbjct: 127 INDPDIEVNVEKGVVFISIADKLLFKSGSYDVSDKAKSVLAKVAKVVNDKPDFECMVEGH 186
Query: 117 TDSIGTLKN-----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
TD + N N +S +R+ I L + + G + P+ ND+
Sbjct: 187 TDDVPYKSNGVILDNWDLSVKRSTSIVRVLTNDLGVNPAKLIAAGRSSYVPLVANDSAEN 246
Query: 172 RQNNQRIEIQIFPR 185
+ N+R I + P+
Sbjct: 247 KARNRRTRIVVMPK 260
>gi|319409315|emb|CBI82959.1| Outer membrane lipoprotein omp16 homolog [Bartonella
schoenbuchensis R1]
Length = 173
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 25/167 (14%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + + D + + GS+ D T +
Sbjct: 24 GCAKKNFNEAGGMHSSMGDANFSSAASGSTQD-----------------------FTVNV 60
Query: 77 PVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
V F + +E +L+ A L ++P + ++ H D GT + NL + Q R+
Sbjct: 61 GDRVFFSLNSSSIELDAEYVLKRQAEWLLRYPHYFVTVEGHADDRGTREYNLALGQRRSI 120
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ YL+ GVSS R ++ + + P+ D N+R+ + I
Sbjct: 121 AVRDYLVSLGVSSQRMKTIS-YGKERPVAVCDDISCWNQNRRVVLTI 166
>gi|153835168|ref|ZP_01987835.1| outer membrane protein [Vibrio harveyi HY01]
gi|148868362|gb|EDL67484.1| outer membrane protein [Vibrio harveyi HY01]
Length = 330
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 56/148 (37%), Gaps = 8/148 (5%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
V + S D E + ++ T + + G + ++
Sbjct: 183 QNQAVVESAESHQDIVEPKV--EVAATKVELKHEGLTQVI-----YFGFDSTKVSQESEQ 235
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L I +L +P + + I TD G + N +++ RA I YL + IS+
Sbjct: 236 KLLEIQKLLVSYPQSQVEIVGFTDDRGASQYNEKLAKRRAQSIAKYLESK-GVKADQISL 294
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
P+ +N ++ GR N+R+E+ I
Sbjct: 295 TSKGELDPVASNHSEDGRVKNRRVEVSI 322
>gi|228471058|ref|ZP_04055893.1| OmpA family protein [Porphyromonas uenonis 60-3]
gi|228307180|gb|EEK16217.1| OmpA family protein [Porphyromonas uenonis 60-3]
Length = 348
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 5/114 (4%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ I + L + +L +A ++ P + I+ HT G N +
Sbjct: 239 EKIEKDFNAAKFVQGKADLTDEAKFVLHDLAKLMEANPDLKLKIEGHTSEEGDEAFNQRL 298
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S+ERA V +LI + S + G PID ++ V N+R E +
Sbjct: 299 SEERAQVAVDFLISQ-GISADRLQAEGKGSSEPIDPSNPDV----NRRTEFIVI 347
>gi|222087026|ref|YP_002545561.1| OmpA family protein [Agrobacterium radiobacter K84]
gi|221724474|gb|ACM27630.1| OmpA family protein [Agrobacterium radiobacter K84]
Length = 321
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + L + +A L + P +
Sbjct: 183 EILSDRDNIRIVGDRFVFQ-SEVLFPSGAADLNPAGQTEMAKLAAALIDLSKEIPPEINW 241
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G +N +S RA + +LI +GV ++R ++ GF PI
Sbjct: 242 VLRVDGHTDNVPLSGNGRYPDNWALSSARAIAVVKFLIAQGVPADRLVAA-GFGEFQPIA 300
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
DT R N+RIE+++ +
Sbjct: 301 PGDTPEARATNRRIELKLTEK 321
>gi|221369488|ref|YP_002520584.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
gi|221162540|gb|ACM03511.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
Length = 453
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTV--IAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + + P++ +A +L + V + + HTD++ ++N S +
Sbjct: 341 LFRSARAEVNPDYAPLVASVAAVLAENRELVGAVRVIGHTDNVPVQRSNPFASNQGLSEA 400
Query: 138 KSYLIQRG----VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ + ++ G A P+ N T+ GR N+R+EI+I R
Sbjct: 401 RAATLAALLVEGGVPAGIVTAEGHADTEPVADNATRAGRAQNRRVEIRIEKR 452
>gi|90412166|ref|ZP_01220172.1| Conserved hypothetical outer membrane protein [Photobacterium
profundum 3TCK]
gi|90326890|gb|EAS43275.1| Conserved hypothetical outer membrane protein [Photobacterium
profundum 3TCK]
Length = 220
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I L + +L+ IA L P T + + HTDS+G N + +RA
Sbjct: 116 IARVYFAFDSQHLTPESQTVLKTIAQKLKNSPQT-VTLNGHTDSVGPQGYNYTLGLQRAK 174
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
YLI V S + + PI++N T GR N+R+++
Sbjct: 175 SSMQYLIDNEVKDTNLKS-KTYGETQPIESNTTSQGRAMNRRVDVV 219
>gi|332882695|ref|ZP_08450307.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679495|gb|EGJ52480.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 344
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 9/138 (6%)
Query: 53 EFQMQLQDTGIVVS-RIGDMI--TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E Q +Q + V+ GD + I + + L I T L + P+
Sbjct: 207 EMQQFIQLLPLSVTVNQGDNLASVFEIDNIHFDYGRINIRYDASVQLAKIVTFLEEHPNV 266
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-- 167
+ I+ HTDS G N+ +S +A VI+ +LI + S ++ +G+ P++ +
Sbjct: 267 RLDIKVHTDSRGDDDYNMSLSNTQAKVIEQWLIDK-GISRNRLTAKGYGETQPVNGCENG 325
Query: 168 ---TKVGRQNNQRIEIQI 182
T+ Q N+R+E +
Sbjct: 326 VPCTEEQHQANKRVEFIV 343
>gi|284041524|ref|YP_003391864.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
gi|283945745|gb|ADB48489.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
Length = 290
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
VV+R G ++ + L+ + +P+L + +L I ++ HTD
Sbjct: 141 DQVEAVVARRGLVVRLLTDQVLFDSGFADLKSEGMPLLTHVGNLLVIDRIHPILVEGHTD 200
Query: 119 SIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ ++N +S RA + YLI R R G+A +P+ +N T GR
Sbjct: 201 DVPISTSRFESNWELSTARATEVVRYLIDR-GVPTRRFGASGYADLHPLGSNGTDRGRAR 259
Query: 175 NQRIEIQI 182
N+R+E+ +
Sbjct: 260 NRRVEVVL 267
>gi|149186387|ref|ZP_01864700.1| hypothetical protein ED21_22898 [Erythrobacter sp. SD-21]
gi|148829976|gb|EDL48414.1| hypothetical protein ED21_22898 [Erythrobacter sp. SD-21]
Length = 288
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + + + IA+ + ++ + +TDS G N ++S+ RA
Sbjct: 172 VTNVYFDSGKWNISPEGQREICDIASQAEAMDNALLLVVGYTDSDGNEDYNQVLSERRAG 231
Query: 136 VIKSYLIQRGVSS-NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +YL Q+ R ++ G + P N T G+ N+R+ + I
Sbjct: 232 RVVNYLQQKCGWQPWRMLTPTGMSESDPAADNSTPEGKAQNRRVSVNIL 280
>gi|316936265|ref|YP_004111247.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315603979|gb|ADU46514.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
Length = 464
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 1/161 (0%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S + + + KA+ + V +
Sbjct: 304 SGDALYEAAASQIRGGLNKELPQGWTVKADLSVKPAAAPVDASVCQQLFNGLLAKTTVQF 363
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ + K +L + + P+ I I HTDS G N +S++RA + Y+
Sbjct: 364 DSASAGISKDSAGLLDRLIETAMRCPNARIEIAGHTDSDGDDAFNQSLSEKRARAVVDYM 423
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ R + + G+ K P+ ND+ G+ N+RI+ +
Sbjct: 424 V-RAGVTPERLQAFGYGSKIPLSGNDSDAGKAKNRRIDFVV 463
>gi|118588450|ref|ZP_01545859.1| probable outer membrane lipoprotein [Stappia aggregata IAM 12614]
gi|118439156|gb|EAV45788.1| probable outer membrane lipoprotein [Stappia aggregata IAM 12614]
Length = 162
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 24/173 (13%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
I ++GC A + I
Sbjct: 1 MIGFGLAGCNSAGGLSSPDVTNAPAAGF-----------------------GNISPGSEE 37
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ I + + ++ A LNK ++ IQ H D G+ +
Sbjct: 38 EFIINVGRRIYFDQGSAVVTDEARITIENQAKWLNKNKKWLVKIQGHADDPGSEAAQKTL 97
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S +RA+ + + L++ GVS R V+G+ + P+ D + N+R+ + +
Sbjct: 98 STQRANAVMAELVKLGVSPKRMW-VKGYGVERPVTDCDQVTCQSQNRRVVVNL 149
>gi|45655964|ref|YP_000050.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|45599197|gb|AAS68687.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 687
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTG---IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ ++ + Q + G I + D+ Y ++ + ++ +L
Sbjct: 543 ATASKYISESINIIQKNISKNGTVTIYLKAESDVDPVYNLRVYFEFNKTKITEENKKLLD 602
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ L K S I I HTD++ + + N +S +RA + YL+ + + + +R +
Sbjct: 603 PLVGYLLKNASDKIEIGGHTDNVASKEYNTRLSAKRARNVYEYLLSK-GIPEKRMRIRAY 661
Query: 158 AYKYPIDTNDTKVGRQNNQRI 178
Y P N+T+ GR N+R+
Sbjct: 662 WYSQPDADNETETGRAKNRRV 682
>gi|24212756|ref|NP_710237.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
gi|24193397|gb|AAN47255.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
Length = 687
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTG---IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ ++ + Q + G I + D+ Y ++ + ++ +L
Sbjct: 543 ATASKYISESINIIQKNISKNGTVTIYLKAESDVDPVYNLRVYFEFNKTKITEENKKLLD 602
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ L K S I I HTD++ + + N +S +RA + YL+ + + + +R +
Sbjct: 603 PLVGYLLKNASDKIEIGGHTDNVASKEYNTRLSAKRARNVYEYLLSK-GIPEKRMRIRAY 661
Query: 158 AYKYPIDTNDTKVGRQNNQRI 178
Y P N+T+ GR N+R+
Sbjct: 662 WYSQPDADNETETGRAKNRRV 682
>gi|322417797|ref|YP_004197020.1| hypothetical protein GM18_0255 [Geobacter sp. M18]
gi|320124184|gb|ADW11744.1| conserved repeat domain protein [Geobacter sp. M18]
Length = 2257
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 52/139 (37%), Gaps = 9/139 (6%)
Query: 60 DTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH- 116
D + V + + ++ + L + L +A +L +F I + H
Sbjct: 806 DNILSVVKEENQVSLPPVVLHPHFPTFGAELSGEDRKELDRLAELLRRFDINHIEVTGHT 865
Query: 117 ------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
S NN +S RA + YL + + G + P+ +N +
Sbjct: 866 DLVRIAPRSRNIYANNTALSFARARSVGRYLTAALHLPPESLDLTGRGEREPVASNGMEA 925
Query: 171 GRQNNQRIEIQIFPRGNIK 189
GR N+R+E+++ N++
Sbjct: 926 GRAQNRRVEVKVSLSQNVQ 944
>gi|222106979|ref|YP_002547770.1| OmpA-type porin [Agrobacterium vitis S4]
gi|221738158|gb|ACM39054.1| OmpA-type porin [Agrobacterium vitis S4]
Length = 511
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 8/141 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
Q +++ + +S + I F ++ +F +LQ I L +
Sbjct: 339 LQPEVEKKLVSLSDANGRLRVRINNSGLFDTGSADVKGQFRDLLQRIGGALAAEKFRAVV 398
Query: 113 IQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I +TD++ +N +S+ RA + L I G A PI NDT
Sbjct: 399 I-GYTDNVPIKTVQFPSNWHLSEARAKAVGEILSSFTGPDA--ILTEGRADSDPIAGNDT 455
Query: 169 KVGRQNNQRIEIQIFPRGNIK 189
GR+ N+R EI + + K
Sbjct: 456 PEGREMNRRTEILVLTNPDEK 476
>gi|319779140|ref|YP_004130053.1| 18K peptidoglycan-associated outer membrane lipoprotein [Taylorella
equigenitalis MCE9]
gi|317109164|gb|ADU91910.1| 18K peptidoglycan-associated outer membrane lipoprotein [Taylorella
equigenitalis MCE9]
Length = 166
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+E ++ M+Q+ A L+ P+ + ++ +TD G+ + NL + Q R+
Sbjct: 60 KSVYFAFDSYTVEPEYNEMIQMHAKYLSSNPTRTVRVEGNTDLRGSSEYNLALGQRRSVA 119
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ L+ + ++ + F + P T +++ N+R +IQ
Sbjct: 120 VAR-LLNQYGVNSAQLEAVSFGKERPQATGNSEEAHAQNRRADIQ 163
>gi|16127459|ref|NP_422023.1| OmpA family protein [Caulobacter crescentus CB15]
gi|221236272|ref|YP_002518709.1| peptidoglycan-associated lipoprotein pal [Caulobacter crescentus
NA1000]
gi|13424913|gb|AAK25191.1| OmpA family protein [Caulobacter crescentus CB15]
gi|220965445|gb|ACL96801.1| peptidoglycan-associated lipoprotein pal [Caulobacter crescentus
NA1000]
Length = 188
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+GI+ + D + E + P+L A LN++ S I I+ + D
Sbjct: 63 SGILPGSVQDFVVNIGDRVYFDTDEYVIRADAQPVLAGQAQWLNRYSSVRIRIEGNADER 122
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
GT + NL + RA+ ++ +LI + S+ I F + PID ++ N+
Sbjct: 123 GTREYNLALGARRANAVRDFLIAQ-GVSSARIETISFGKERPIDPGSSEEAWAKNR 177
>gi|111114988|ref|YP_709606.1| outer membrane protein [Borrelia afzelii PKo]
gi|110890262|gb|ABH01430.1| outer membrane protein [Borrelia afzelii PKo]
Length = 389
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + I V + I + + + + +K L LIA +L KF I I+
Sbjct: 262 QEKKIKAISVEKNTKGINLSLDIE-FYPDSFQILQKEYKKLDLIAKLLEKFKKNNILIEG 320
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HT+ G + +S++RA I +YLI+ + + I +G+ + P + + + N
Sbjct: 321 HTEQFGLEEEMHELSEKRARAIGNYLIKMKIKNKDQILFKGWGSQKPKYPKSSPL-KAKN 379
Query: 176 QRIEIQIFPR 185
+R+EI I
Sbjct: 380 RRVEITILNN 389
>gi|51594942|ref|YP_069133.1| OmpA/OmpF family outer membrane porin [Yersinia pseudotuberculosis
IP 32953]
gi|51588224|emb|CAH19831.1| putative OmpA/OmpF family outer membrane porin [Yersinia
pseudotuberculosis IP 32953]
Length = 168
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 51/140 (36%), Gaps = 2/140 (1%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ + LQ+ G ++ G + L + + +Q I IL
Sbjct: 29 QAKPQGLTPDQITALQEQGFKLTDNGWEFGL-ANKVLFDSDVKKLNSEGMQTVQKIGRIL 87
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + + HTDS+G N +S +RA + L I VRG P+
Sbjct: 88 SDVGIKHMRVDGHTDSVGKDDYNQQLSYQRALAVADTLAT-VGIPKSNIDVRGRGKLEPV 146
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
N T GR N+R+ I I
Sbjct: 147 ADNRTSKGRAENRRVAIIIT 166
>gi|216263832|ref|ZP_03435826.1| outer membrane protein [Borrelia afzelii ACA-1]
gi|215979876|gb|EEC20698.1| outer membrane protein [Borrelia afzelii ACA-1]
Length = 389
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + I V + I + + + + +K L LIA +L KF I I+
Sbjct: 262 QEKKIKAISVEKNTKGINLSLDIE-FYPDSFQILQKEYKKLDLIAKLLEKFKKNNILIEG 320
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HT+ G + +S++RA I +YLI+ + + I +G+ + P + + + N
Sbjct: 321 HTEQFGLEEEMHELSEKRARAIGNYLIKMKIKNKDQILFKGWGSQKPKYPKSSPL-KAKN 379
Query: 176 QRIEIQIFPR 185
+R+EI I
Sbjct: 380 RRVEITILNN 389
>gi|117925243|ref|YP_865860.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1]
gi|117608999|gb|ABK44454.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1]
Length = 257
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKF 106
+K E+ + + + D I +FV L F L I IL
Sbjct: 88 EKVENVLGPMVDNGEAEMYTDQDGFVMQIDSDTTFVPGTLQLSDTFQAKLTEICNILTTH 147
Query: 107 PSTV---IAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
P T I I +HTD+ G L N +S +A + Y+ +G + VR
Sbjct: 148 PDTKNNKIRIIAHTDTTPPPGGMLPTNWALSAAQAAAVVGYMSTQGGVDPVRLEVRAKGE 207
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
P ++NDT GR N+RIEI + R +
Sbjct: 208 FAPKESNDTADGRSKNRRIEI-LISRETV 235
>gi|255262798|ref|ZP_05342140.1| OmpA domain protein [Thalassiobium sp. R2A62]
gi|255105133|gb|EET47807.1| OmpA domain protein [Thalassiobium sp. R2A62]
Length = 176
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 69/189 (36%), Gaps = 16/189 (8%)
Query: 2 IKELGLSMFIMTTI--SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K++ + F++ T+ S C A R ++ + +LD A + +Q
Sbjct: 1 MKQMTKAAFLIATLGISACTNADRFDNVTPTDANSGFGQPSGVDSLALDPANNPTSLQYF 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
I GD + + V L L AT L + ++ H D
Sbjct: 61 SQTI-----GDRV-------LFTVDTSSLTAAGRSTLDGQATWLLTNSDYLAVVEGHADE 108
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + RA+ ++ YLI R + + + + P + + N+R
Sbjct: 109 QGTREYNLALGARRANAVREYLISR-GVPSNRLRTVSYGKERPTEICSEEACYAKNRRA- 166
Query: 180 IQIFPRGNI 188
+ I G +
Sbjct: 167 VTIISAGAL 175
>gi|33595602|ref|NP_883245.1| hypothetical protein BPP0920 [Bordetella parapertussis 12822]
gi|33600116|ref|NP_887676.1| hypothetical protein BB1130 [Bordetella bronchiseptica RB50]
gi|33565680|emb|CAE40328.1| probable outer membrane protein [Bordetella parapertussis]
gi|33567714|emb|CAE31628.1| probable outer membrane protein [Bordetella bronchiseptica RB50]
Length = 215
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 56/159 (35%), Gaps = 13/159 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ + E L + + + I + ++ L+ + +L +
Sbjct: 56 QAETQRREALEQALAAPLAAGRVTL--VDGRIGIS-GNVLFALNSDQLQPEGREILASLV 112
Query: 101 TILNKF---PSTVIAIQSH------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L+ + ++ + +N +S +RA + LI G+ +
Sbjct: 113 APLSAYLRAHDEILMVSGFTDDQQVHQGNRRYADNWELSAQRALTVTRALIDAGIPAASV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ F + P+ +N + GR N+R+EI PR + K
Sbjct: 173 FAAA-FGAEQPVASNADETGRAQNRRVEIAPIPRQSADK 210
>gi|224534380|ref|ZP_03674958.1| outer membrane protein [Borrelia spielmanii A14S]
gi|224514482|gb|EEF84798.1| outer membrane protein [Borrelia spielmanii A14S]
Length = 381
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 2/130 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + I V + I + + + + + +K L LIA +L KF I I+
Sbjct: 254 QEKKIKAISVEKNNKGINLSLDIE-FYPNSFQILQKEYKKLDLIAKLLEKFKKNNILIEG 312
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HT+ G + +S++RA I +YLI+ V + I +G+ + P + + + N
Sbjct: 313 HTEQFGLEEEMYELSEKRARAIGNYLIKMKVKNKDQILFKGWGSQKPKYPKSSPL-KAKN 371
Query: 176 QRIEIQIFPR 185
+R+EI I
Sbjct: 372 RRVEITILNN 381
>gi|183219622|ref|YP_001837618.1| flagellar motor protein MotB [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909761|ref|YP_001961316.1| flagellar motor protein MotB [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774437|gb|ABZ92738.1| Endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778044|gb|ABZ96342.1| Chemotaxis MotB protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 277
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 60/186 (32%), Gaps = 16/186 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-PV 78
++ +S + +V + S A++ F+ +++ + +S + +
Sbjct: 68 SKGSLEEMGMQIESLPSQVVGRNLSKSKKDAQEVFKPEVEAGKVRISENERGLVISLVGA 127
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI------------GTLKNN 126
+ L L+ A ++ + ++ H+D NN
Sbjct: 128 DYFYPGSAILTPAIRETLRKAAGLIKGL-ERFVRVEGHSDDDAVNPVSRPGREEREYINN 186
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGRQNNQRIEIQIFP 184
++ RA ++I + F P+ T + N+R++I I
Sbjct: 187 WDLAGARAVNATVFMINAEEIEPSWFQAVSFGSYRPLVLENEGTPEAKAFNRRVDIIILT 246
Query: 185 RGNIKK 190
+ K+
Sbjct: 247 EKSTKR 252
>gi|94495568|ref|ZP_01302148.1| hypothetical protein SKA58_05950 [Sphingomonas sp. SKA58]
gi|94424956|gb|EAT09977.1| hypothetical protein SKA58_05950 [Sphingomonas sp. SKA58]
Length = 290
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 56/137 (40%), Gaps = 2/137 (1%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
E + V+ I + L + L A + + ++
Sbjct: 150 AEQSAATEALRGRVADIDQYNVKATTNVNFDTGKTALSPQAKSDLCATAASAEQMDNALL 209
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN-RFISVRGFAYKYPIDTNDTKV 170
+ +TDS G + N ++S++RA + +YL Q R ++ G + PI +NDT+
Sbjct: 210 LVVGYTDSTGPEEYNQMLSEKRAGRVVNYLQQHCNWKPYRMLTPTGMSEAQPIASNDTEQ 269
Query: 171 GRQNNQRIEI-QIFPRG 186
G+ N+R+ + + +G
Sbjct: 270 GKAENRRVSVNILVSKG 286
>gi|328676441|gb|AEB27311.1| 18K peptidoglycan-associated outer membrane lipoprotein;
Peptidoglycan-associated lipoprotein precursor; Outer
membrane protein P6; OmpA/MotB precursor [Francisella
cf. novicida Fx1]
Length = 207
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 65/202 (32%), Gaps = 28/202 (13%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ +++ + M ++ C + + K D SS + +
Sbjct: 1 MMKKRIMNLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSS----QIYGSDK 56
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L + +++ + L A L P I + +T
Sbjct: 57 LSSDQVE-QMKKELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNT 115
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT------------ 165
D G+ K N + Q+RA+ + +YL+ + + I V + P
Sbjct: 116 DPRGSEKYNFNLGQKRAEAVYNYLLGK-NVNKDQICVVSYGKLKPAAEPTQFYDEFCKDG 174
Query: 166 -ND------TKVGRQNNQRIEI 180
ND ++ ++R EI
Sbjct: 175 VNDACMYKASEKAYYLDRRTEI 196
>gi|226227347|ref|YP_002761453.1| putative peptidoglycan-associated lipoprotein [Gemmatimonas
aurantiaca T-27]
gi|226090538|dbj|BAH38983.1| putative peptidoglycan-associated lipoprotein [Gemmatimonas
aurantiaca T-27]
Length = 185
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 64/185 (34%), Gaps = 14/185 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHK--SNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
L + + + C +N+ + + +D E + ++ +
Sbjct: 7 LTVLVSTTLVLGACKKKQPPAPAPIPAPVPTNEAPVRTTPAPTPVDTMEAY-RSKIAEAR 65
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ + L + L ILN P I I H D G+
Sbjct: 66 ARL----------LETIYFEYDADELRDEARASLDAKLAILNANPGLRIRIAGHCDERGS 115
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ N+ + + R++ K YL RGV ++R I F + P + ++ N+R E +I
Sbjct: 116 DEYNIALGRRRSEAAKRYLTDRGVDASR-IETSSFGRERPAVSGTSEESWSKNRRDEFEI 174
Query: 183 FPRGN 187
G+
Sbjct: 175 AAGGD 179
>gi|126733574|ref|ZP_01749321.1| OmpA family protein [Roseobacter sp. CCS2]
gi|126716440|gb|EBA13304.1| OmpA family protein [Roseobacter sp. CCS2]
Length = 216
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 11/185 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + + T+S C A R+ + + FG E +L T
Sbjct: 1 MKYVITAAIAAATLSACSSADRQVGTASFFTEAGSALDAGDFG------EATMNNRLVQT 54
Query: 62 GIV--VSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G + + V+F L+ L A + +FP + HTD
Sbjct: 55 GAQDYTINLARRFAAEVNTTVNFAFNSTVLDADARSTLMRQADWIRQFPEVRFKVYGHTD 114
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+G+ N + RA ++L +G++ NR +V F P+ D + R N+R
Sbjct: 115 LVGSQGYNRSLGLRRAQAAVAFLASQGINRNRLEAVVSFGETQPLVVTDGRERR--NRRT 172
Query: 179 EIQIF 183
++
Sbjct: 173 VTEVT 177
>gi|327404631|ref|YP_004345469.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320139|gb|AEA44631.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 798
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 11/125 (8%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
G I + ++ + L I I+ K P+ I + SHTDS G N+
Sbjct: 674 GTDIGLNVNPIYFDYNKWDIRPDAAKELDKIVEIMKKNPNIKIELGSHTDSRGKDDYNIK 733
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT----------NDTKVGRQNNQRI 178
+S +RA Y++ + + I+ +G+ + ++ + G Q N+R
Sbjct: 734 LSDQRAKASARYIVSK-GIAAGRITGKGYGETKLKVSDEQINNMPKWDEKEKGHQLNRRT 792
Query: 179 EIQIF 183
E I
Sbjct: 793 EFIIV 797
>gi|86359052|ref|YP_470944.1| outer membrane lipoprotein [Rhizobium etli CFN 42]
gi|86283154|gb|ABC92217.1| outer membrane lipoprotein [Rhizobium etli CFN 42]
Length = 178
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 2/119 (1%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G T + + F ++ + L A L ++P+ I ++ H D
Sbjct: 51 GAGAATPGSTQDFTVNVGDRIFFDTDSTSIRADAAQTLDRQAQWLGRYPNYQITVEGHAD 110
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + NL + RA K YL RGV + R ++ + + P+ D N+R
Sbjct: 111 ERGTREYNLALGARRAAATKDYLASRGVPAQRMKTIS-YGKERPVAVCDDISCWSQNRR 168
>gi|194366042|ref|YP_002028652.1| hypothetical protein Smal_2266 [Stenotrophomonas maltophilia
R551-3]
gi|194348846|gb|ACF51969.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
Length = 212
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 67/189 (35%), Gaps = 17/189 (8%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L + + G E + + KR L E L + +
Sbjct: 25 VLLGAFVLILVGVVAVQLELSQRLDQEVKQRQAEAKR----LQTLEQALAGPLAAGRVTL 80
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV---IAIQSHTDSIGT 122
+ I + ++ L+ + +L+ +A L + T + + TD
Sbjct: 81 --VDGRIGIS-GSVLFALNSDQLQPEGQELLRSLAAPLAAYLGTREEILMVSGFTDDAPV 137
Query: 123 LK------NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+ +N +S +R+ + LI GV ++ + F + P+ +N + GR N+
Sbjct: 138 REGNRRFADNWELSAQRSLTVTRTLIADGVPADAVFAAA-FGSEQPVSSNADEAGRARNR 196
Query: 177 RIEIQIFPR 185
R+EI P+
Sbjct: 197 RVEIAPIPK 205
>gi|33152784|ref|NP_874137.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Haemophilus ducreyi 35000HP]
gi|1150840|gb|AAC44382.1| 18 kDa outer membrane protein [Haemophilus ducreyi]
gi|33149008|gb|AAP96526.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Haemophilus ducreyi 35000HP]
Length = 157
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 37/183 (20%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K ++ + ++ C +S + +
Sbjct: 1 MKKIAKVLMIAAPAFVLTACSSSSGKTDANA---------------------------NM 33
Query: 59 QDTGIVVSRIG----DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ V++ G + + +E ++ +L A L ++ + +
Sbjct: 34 NGDAMAVNQFGGMTTEDLQTRYNTVYFNFDSYAVEGEYRQLLDAHAAYLTS-SNSKVTVT 92
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
H D GT + N+ + Q RAD +K+YL +GVS +S + + P T+
Sbjct: 93 GHADERGTPEYNIALGQRRADAVKNYLATKGVSQ---VSTVSYGEEKPSVLGHTEADYAK 149
Query: 175 NQR 177
N+R
Sbjct: 150 NRR 152
>gi|296410004|gb|ADH15778.1| OmpP6 [Haemophilus influenzae]
Length = 141
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 60/172 (34%), Gaps = 31/172 (18%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L + ++ C ++ + + + FG + Q
Sbjct: 1 LLVAGSVAALAACSSSNND---------AAGNGAGQTFGGYS---VADLQQ--------- 39
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + +++ +L A LN P+ + ++ +TD GT +
Sbjct: 40 ---------RYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEY 90
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
N+ + Q RAD +K YL +GV + + +V + + P + N+R
Sbjct: 91 NIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 141
>gi|225552270|ref|ZP_03773210.1| flagellar motor apparatus [Borrelia sp. SV1]
gi|225371268|gb|EEH00698.1| flagellar motor apparatus [Borrelia sp. SV1]
Length = 260
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 14/162 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE-KKFLPMLQL 98
+ ++ +K+ EF ++Q IVV + I + F S ++ ++ +Q
Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIVVRQEERGIVISLAADAFFDSASADVKLEENRDSIQK 150
Query: 99 IATIL--NKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSN-- 149
IA+ + I+ HTD+ G K+N +S R+ + +++ S+
Sbjct: 151 IASFIGFLSPRGYNFKIEGHTDNIDTDINGPWKSNWELSVARSVNMLEHILNYLDQSDVK 210
Query: 150 ---RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
V GF PI T+DT GR N+RI+I I ++
Sbjct: 211 RIENSFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTDASL 252
>gi|189184227|ref|YP_001938012.1| peptidoglycan-associated lipoprotein [Orientia tsutsugamushi str.
Ikeda]
gi|189180998|dbj|BAG40778.1| peptidoglycan-associated lipoprotein [Orientia tsutsugamushi str.
Ikeda]
Length = 204
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 75/200 (37%), Gaps = 20/200 (10%)
Query: 1 MIKELGLSMFIMTTISG----CG----------LASREKKKVFLHKSNDTDIVNKRFGSS 46
MIK+ +S+ ++ +SG C K + +++ S
Sbjct: 1 MIKKSIISICVLVLLSGYKWKCLWQRSKHSNFISKVVGTKDFKGDNDDIVGMISSINAES 60
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
D+ Q+ + V + + V F + + L ++ +L+ + L
Sbjct: 61 SDQVTSNNANAQQEEYVDVKHEQFLQAIHGKHKVYFATEKFDLSEESKRVLRAQSAWLKN 120
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP--- 162
P I I+ H D GT + NL + ++RAD +K +L+ S I + P
Sbjct: 121 NPDVKIIIEGHCDERGTREYNLALGKKRADAVKQFLVTL-GVSRDKIETTSYGKDKPEVE 179
Query: 163 IDTNDTKVGRQNNQR-IEIQ 181
+ ++ + + N+R + I
Sbjct: 180 VTKDNKEEAYRLNRRSVTII 199
>gi|94676590|ref|YP_588572.1| peptidoglycan-associated lipoprotein precursor [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|94219740|gb|ABF13899.1| peptidoglycan-associated lipoprotein precursor [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
Length = 211
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ +++ + V + + ++ F+PML A L PS + I+ H D
Sbjct: 91 SDALLTNKQWPMISDQNVIYFTLDKYKIKSCFIPMLDEHAQFLRSNPSAQVIIEGHADER 150
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA+ +K YL + + I + + + P K N+R +
Sbjct: 151 GTPEYNIALGERRANAVKRYLQSQ-GVCSEQIKIISYGKEKPAVFGHNKAAYAKNRRTVL 209
Query: 181 Q 181
Sbjct: 210 V 210
>gi|71907808|ref|YP_285395.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71847429|gb|AAZ46925.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 261
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 59/167 (35%), Gaps = 6/167 (3%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ--LQDTGIVVSRIGDMIT---CY 75
+ + + + + + + +
Sbjct: 93 KGQMQVNGTQIAIKGNVANEALRQQVVSNLATSLNPTYTIDNGLVAAAGEAQNVLDKTLS 152
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
V V L +L + + + + + + HTDS G+ + N+ +S RA+
Sbjct: 153 NRVVEFEVGAATLTPAGRVILDEMYAAIKQIGTPKVQVIGHTDSSGSRQANIALSLSRAN 212
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++SYLI++ ++ G P+ +ND+ GR N+RIE ++
Sbjct: 213 SVRSYLIEK-GLPADGLTAVGSGPDQPVGSNDSSEGRAKNRRIEFKL 258
>gi|186893942|ref|YP_001871054.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
PB1/+]
gi|186696968|gb|ACC87597.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 168
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 51/140 (36%), Gaps = 2/140 (1%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ + LQ+ G ++ G + L + + +Q I IL
Sbjct: 29 QAKPQGLTPDQITALQEQGFKLTDNGWEFGL-ANKVLFDSDVKKLNSEGMQTVQKIGRIL 87
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + + HTDS+G N +S +RA + L I VRG P+
Sbjct: 88 SDVGIKHMRVDGHTDSVGKDDYNQQLSYQRALAVADTLAT-VGIPKSNIDVRGRGKLEPV 146
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
N T GR N+R+ I I
Sbjct: 147 ADNRTSKGRAENRRVAIIIT 166
>gi|116623181|ref|YP_825337.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226343|gb|ABJ85052.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 911
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++F + P L +A +L++ + + HTD +G+ N ++ RAD +
Sbjct: 33 EEINFEFNSSILSDGYPSLLRLADLLSQHRDYKVKVTGHTDYVGSAAYNDKLALRRADAV 92
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + ++ G + PI N TK GR N+R+++ +
Sbjct: 93 -KAFLVKYGVGDAQVTTSGDGKRSPIVDNKTKEGRFMNRRVDLAVT 137
>gi|254473105|ref|ZP_05086503.1| OmpA/MotB [Pseudovibrio sp. JE062]
gi|211957826|gb|EEA93028.1| OmpA/MotB [Pseudovibrio sp. JE062]
Length = 160
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Query: 53 EFQMQLQDTGIVVSR-IGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ + +L V+ G + V F ++ L+ +L A L + +
Sbjct: 27 QTRPELTSGNSSVAAGSGQDFVVNVGDRVFFLNNQSSLDGAARGVLDKQAQWLQHYKNYS 86
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I I+ H D GT + N+ + RA ++ YL+ +G+S +R ++ + + P+ +
Sbjct: 87 ITIEGHADERGTRQYNIALGARRAAAVREYLVAKGISPSRIKTIS-YGKERPVAVCNAAS 145
Query: 171 GRQNNQR 177
N+R
Sbjct: 146 CWSQNRR 152
>gi|253699085|ref|YP_003020274.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251773935|gb|ACT16516.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 1709
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 55/142 (38%), Gaps = 11/142 (7%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D+ + + Q+ + + ++ +++ P + + ++L +L+ + +
Sbjct: 80 DQGDRTEKRQVAEKEVKTVKVANLV----PPIRFRTGDAEISSEYLELLRGVLEKMRGRD 135
Query: 108 STVIAIQSHTDSIGTLKNNLLI-------SQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ + H D+ S+ERA Y + IS +G
Sbjct: 136 NVRLHFVGHADTQQLSGPLKEKFGDNTGLSRERAGTTAEYCQRALALPPEAISYQGLGDA 195
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
P+ N T+ GR N+R+E+++
Sbjct: 196 KPVAPNSTEEGRALNRRVEVEV 217
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 36/99 (36%), Gaps = 7/99 (7%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI-------SQERADVIKS 139
+ ++F ++ L + + +++D+ + I S+ A +
Sbjct: 278 TVPEEFQQRIRQALDNLQGKQNLSVKFIAYSDTSPLEARDERIYGDQLGLSKAVARRVAL 337
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ + S G P+ +N+T GR N+R+
Sbjct: 338 AVQEAMKGSKVAFESDGKGSALPVASNETPQGRVLNRRV 376
>gi|51598427|ref|YP_072615.1| outer membrane protein [Borrelia garinii PBi]
gi|51572998|gb|AAU07023.1| outer membrane protein [Borrelia garinii PBi]
Length = 389
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ +++D G+ + G ++ I + + +K L LIA +L KF I I+
Sbjct: 263 EKKIKDIGVEKNNKGINLSFDIE---FYPDSFQILQKEYKKLDLIAKLLEKFKKNNILIE 319
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HT+ G + +S++RA I +YLI+ V + I +G+ + P + + +
Sbjct: 320 GHTEQFGLEEEMYELSEKRARTIGNYLIKMKVKNKDQILFKGWGSQKPKYPKSSPL-KAK 378
Query: 175 NQRIEIQIFPR 185
N+R+EI I
Sbjct: 379 NRRVEITILNN 389
>gi|73667180|ref|YP_303196.1| OmpA/MotB domain-containing protein [Ehrlichia canis str. Jake]
gi|72394321|gb|AAZ68598.1| OmpA/MotB domain [Ehrlichia canis str. Jake]
Length = 162
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I + + +L+ + K +T I I HTD+ GT + NL + ++RA
Sbjct: 40 TIEKIYFDFGKATIGDSDKAILEKVIQKAQKDTNTNIVIVGHTDTRGTDEYNLELGEQRA 99
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID------TNDTKVGRQNNQRIEIQIFPRGN 187
+ +K ++I+ S I+V+ P + + N+R+ I + GN
Sbjct: 100 NAVKDFIIEHDKSLENRITVQSKGKSEPAVLVYSSNPEEAEHAHAKNRRVVITLTDNGN 158
>gi|288917360|ref|ZP_06411727.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
gi|288351225|gb|EFC85435.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
Length = 409
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 18/166 (10%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+ G + + + + + + Q L+ T +
Sbjct: 258 AAPGSSVTAPSVTAPSAPDPSATGSAGAVPEAGRTQGALQAALEGTSLT----------- 306
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
V E L+ L +A L + + HTDS G L N +S +RA
Sbjct: 307 -----FAVGESTLDASVRAGLDKVAQALLP-GDLTVLVGGHTDSTGPLAFNQALSMDRAR 360
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + V GF + P+ N T GR N+R+++
Sbjct: 361 AA-REYLVQRGVPAERVRVAGFGPERPVADNATVAGRAANRRVDVT 405
>gi|88802038|ref|ZP_01117566.1| outer membrane protein [Polaribacter irgensii 23-P]
gi|88782696|gb|EAR13873.1| outer membrane protein [Polaribacter irgensii 23-P]
Length = 450
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 15/182 (8%)
Query: 17 GCGLASREKK--------KVFLHKSNDT----DIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
GC + V +N D DK + +
Sbjct: 270 GCPDTDGDGTFDKDDKCSDVAGPTANAGCPWPDTDGDSILDKDDKCPTVAGIASEGGCPE 329
Query: 65 VSRIGDMITCY--IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V + + + ++ L + I+N+FP AI+ +TD G+
Sbjct: 330 VITNEAKMGMDTFAEAILFTLESANFQRGVRKDLDGMLAIINEFPQANFAIRGYTDVSGS 389
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ NL +S RA+ +K YL++ G+ + R ++V GF + P +N T+ GR N+R+E+++
Sbjct: 390 VSGNLKLSNSRANAVKDYLVKNGIDAAR-LTVAGFGQESPTASNKTRAGRIQNRRVEVKV 448
Query: 183 FP 184
Sbjct: 449 TN 450
>gi|162454713|ref|YP_001617080.1| hypothetical protein sce6431 [Sorangium cellulosum 'So ce 56']
gi|161165295|emb|CAN96600.1| Putative outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 293
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
++ E+++ L + + + + + + +L G+ V+ + + +P
Sbjct: 102 SSTLEEREKALAEFKARARQLEAIKARFETLKKKL-DELTKLGLAVNIRNNRMVISLPGD 160
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTV---IAIQSHTDSI----GTLKNNLLISQ 131
V F L+K+ +L +AT++ S + + HTD+ G ++N +S
Sbjct: 161 VLFDSGRETLKKEGKEILLKVATVVKNDKSLLQRDYQVAGHTDNKPLVGGQFRDNWGLSL 220
Query: 132 ERADVIKSYLIQRGVSSN-------RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA + +L+ S GFA P+ TNDT GRQ N+R ++ + P
Sbjct: 221 MRAREVLVFLVSPADVKGGGGALPVANWSAAGFADTDPVATNDTDEGRQKNRRCDLIVVP 280
>gi|187925345|ref|YP_001896987.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
gi|187716539|gb|ACD17763.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 266
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 37/113 (32%), Gaps = 1/113 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
L L + + + +TD G +NL +SQ
Sbjct: 155 LLLQGNANFATDSAALSSVAKENLDRFMNVNQGVNLHRVTVTGYTDKTGLEAHNLKLSQA 214
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA + YL RG P+ N T GR N+R+++++F
Sbjct: 215 RAAAVMQYLRDG-GLHADQFVARGLGSADPVAPNATAEGRTQNRRVDVRVFAE 266
>gi|187918154|ref|YP_001883717.1| flagellar motor protein MotB [Borrelia hermsii DAH]
gi|119861002|gb|AAX16797.1| chemotaxis MotB protein [Borrelia hermsii DAH]
Length = 262
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 14/168 (8%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE-KKF 92
T+ + S +K+ EF ++Q ++V + + F S ++
Sbjct: 87 STEKNKQASQVSKNKSIIEFVEKIQSNKVIVREHERGVVVSLLADAFFDSASAEVKLDDN 146
Query: 93 LPMLQLIATIL--NKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRG 145
+Q IA+ + S I+ HTD+ G K+N +S RA + ++
Sbjct: 147 RETIQKIASFIGFLDNQSYNFKIEGHTDNVDVNINGIWKSNWELSSARAVNMLEQILNYT 206
Query: 146 VSSNRF-----ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
S V GFA P+ T+DT GR N+RI+I I ++
Sbjct: 207 DQSKIQSIESKFEVSGFAGSKPVATDDTPEGRAYNRRIDILITSDASL 254
>gi|89052772|ref|YP_508223.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88862321|gb|ABD53198.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 315
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 48/108 (44%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L + L +A L + P+ I + HTD++G+L N+ +S+ RA
Sbjct: 205 LDDLQFETGASQLSGERYGSLTALAAFLAEDPARSIVLVGHTDALGSLSGNIALSRSRAL 264
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +L + +G + P +N T GR+ N+R+E+ +
Sbjct: 265 AVLQFLTGELGVDPAQVEFQGIGFLSPRASNTTPEGREANRRVEVVLT 312
>gi|56707951|ref|YP_169847.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670422|ref|YP_666979.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
tularensis FSC198]
gi|118496967|ref|YP_898017.1| OmpA family peptidoglycan-associated lipoprotein [Francisella
tularensis subsp. novicida U112]
gi|194324196|ref|ZP_03057970.1| OmpA family protein [Francisella tularensis subsp. novicida FTE]
gi|224457032|ref|ZP_03665505.1| OmpA family peptidoglycan-associated lipoprotein [Francisella
tularensis subsp. tularensis MA00-2987]
gi|254370440|ref|ZP_04986445.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254372337|ref|ZP_04987828.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
novicida GA99-3549]
gi|254874755|ref|ZP_05247465.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56604443|emb|CAG45475.1| Peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320755|emb|CAL08858.1| Peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
tularensis FSC198]
gi|118422873|gb|ABK89263.1| peptidoglycan-associated lipoprotein, OmpA family [Francisella
novicida U112]
gi|151568683|gb|EDN34337.1| hypothetical protein FTBG_00207 [Francisella tularensis subsp.
tularensis FSC033]
gi|151570066|gb|EDN35720.1| peptidoglycan-associated lipoprotein [Francisella novicida
GA99-3549]
gi|194321643|gb|EDX19127.1| OmpA family protein [Francisella tularensis subsp. novicida FTE]
gi|254840754|gb|EET19190.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
tularensis MA00-2987]
Length = 207
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 65/202 (32%), Gaps = 28/202 (13%)
Query: 1 MIKE--LGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ + L++ M ++ C + + K D SS + +
Sbjct: 1 MMKKRIINLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSS----QIYGSDK 56
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L + +++ + L A L P I + +T
Sbjct: 57 LSSDQVE-QMKKELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNT 115
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT------------ 165
D G+ K N + Q+RA+ + +YL+ + + I V + P
Sbjct: 116 DPRGSEKYNFNLGQKRAEAVYNYLLGK-NVNKDQICVVSYGKLKPAAEPTQFYDEFCKDG 174
Query: 166 -ND------TKVGRQNNQRIEI 180
ND ++ ++R EI
Sbjct: 175 VNDACMYKASEKAFYLDRRTEI 196
>gi|83647595|ref|YP_436030.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83635638|gb|ABC31605.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 187
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 64/181 (35%), Gaps = 2/181 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQD 60
I+ + + + +GC + D + E+E Q +
Sbjct: 6 IRNIFALVLVSFIAAGCTSTDTRPDETVGVVDQDGADAGGVGLGNGSGLSEEELAEQQRL 65
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V + ++ + L+ A +L P+ + + + D
Sbjct: 66 AEQNAMTAEQDALREVRVFYFDFDKTIVKPESHMSLRAHAALLAANPAVKVVLNGYADER 125
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + NL + + RA I+ +L+ +++ I + ++P+D + N+R+ I
Sbjct: 126 GTKEYNLALGERRAQAIERFLVVN-GANDSQIETVSYGEEFPVDPAHNEAAWNKNRRVVI 184
Query: 181 Q 181
+
Sbjct: 185 E 185
>gi|254253774|ref|ZP_04947091.1| OmpA/MotB [Burkholderia dolosa AUO158]
gi|124898419|gb|EAY70262.1| OmpA/MotB [Burkholderia dolosa AUO158]
Length = 232
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 75/218 (34%), Gaps = 39/218 (17%)
Query: 3 KELGLSMFI-MTTISGCGLASR--------EKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
K+L L++ + ++ C AS + + D + + + A
Sbjct: 14 KKLHLALLASVAFLAACSSASGPTFNAYELQPRNGVRTFQVDCHGILSSEKTCMKVATRM 73
Query: 54 FQMQ---LQDTGIVVSRIGDMITCYIP--------------------------VHVSFVS 84
+ + D+ D +
Sbjct: 74 CDKEPVRVVDSAAPFRDGADPRSLVFQCGAAPAPAAAPVPAAPAAVEKVSLTGDAYFATD 133
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L L + + I + +TD++G+ N+ +S+ RAD + +YL +R
Sbjct: 134 SATLTPAARAALDKLLNRQGDRHFSRIEVTGYTDAVGSDAYNVALSRRRADAVAAYLRER 193
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G++++ F++ G P +N T GR +N+R+EI +
Sbjct: 194 GLNADSFVAT-GKGKADPGASNATAEGRASNRRVEISL 230
>gi|224534343|ref|ZP_03674921.1| flagellar motor apparatus [Borrelia spielmanii A14S]
gi|224514445|gb|EEF84761.1| flagellar motor apparatus [Borrelia spielmanii A14S]
Length = 260
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 14/162 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE-KKFLPMLQL 98
+ ++ +K+ EF ++Q I+V I + F S ++ + +Q
Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIMVRMEERGIVISLAADAFFDSASADVKLEDNRDSIQK 150
Query: 99 IATIL--NKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSN-- 149
IA+ + I+ HTD+ G K+N +S R+ + +++ SN
Sbjct: 151 IASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKSNWELSVARSVNMLEHILNYLDQSNVT 210
Query: 150 ---RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
V GF PI T+DT GR N+RI+I I ++
Sbjct: 211 SVENKFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTDASL 252
>gi|27366007|ref|NP_761535.1| putative outer membrane protein [Vibrio vulnificus CMCP6]
gi|27362207|gb|AAO11062.1| putative outer membrane protein [Vibrio vulnificus CMCP6]
Length = 208
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 81/197 (41%), Gaps = 10/197 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L + +T + +AS + + + D + D + + DT
Sbjct: 1 MKAFILPLICLTFAATPVIASDKADEYDYLATPRADQLADLQDQDRDGVINA-RDLCPDT 59
Query: 62 GIVVSRIGDMI------TCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQ 114
D + + + V F ++ + F ++ ++ L +PST I +Q
Sbjct: 60 PSTAEIDNDGCGTYVKTSQQMQIRVLFANDSDKINPVFRKQIKEMSEFLKLYPSTSIELQ 119
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ G ++NL +S+ RA+ ++ LI G++ +R + + GF + +V
Sbjct: 120 GYASRTGNAEHNLDLSKRRANNVREMLIGYGIAQSR-VRIVGFGDSALANEGTDEVSHAL 178
Query: 175 NQRIEIQIFP-RGNIKK 190
N+R+ + +G++K+
Sbjct: 179 NRRVVASVVGYKGDVKE 195
>gi|46581507|ref|YP_012315.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601327|ref|YP_965727.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|46450929|gb|AAS97575.1| peptidoglycan-associated lipoprotein, putative [Desulfovibrio
vulgaris str. Hildenborough]
gi|120561556|gb|ABM27300.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
gi|311235156|gb|ADP88010.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris RCH1]
Length = 167
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 51/167 (30%), Gaps = 22/167 (13%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC ++ + + +
Sbjct: 22 GCAKKQV----AATPEAAPVSDMGDSKSADMAALARA-----------------QQIITD 60
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + +L+ A ++ KFPS + ++ H D GT + NL + + RA
Sbjct: 61 AKVYFEFDKFDLKAESKEVLKQKAEVMKKFPSIRVLVEGHCDERGTQEYNLALGERRARA 120
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
YL+ + + + + + P + N+R E ++
Sbjct: 121 AYEYLVML-GVNAGQLEMISYGKERPAVEGHGEAAWSKNRRDEFKVI 166
>gi|323494548|ref|ZP_08099653.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546]
gi|323311275|gb|EGA64434.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546]
Length = 204
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/194 (14%), Positives = 66/194 (34%), Gaps = 19/194 (9%)
Query: 1 MIKE----LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M+ + L I +++ + + ++ + ++ D + +
Sbjct: 1 MMNKHLIPFTLLAIIPFSLA------NAEDEYDYMETPVANQISDLTDEDKDGVVNA-RD 53
Query: 57 QLQDT--GIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPST 109
T G +V G + + F +Q +A L ++ S
Sbjct: 54 ICPGTPLGAMVDNDGCGAAIVEEEERQLRILFANDSYEINPIFSDQIQTMAEFLARYKSA 113
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I IQ + +G NL +S++RA ++ L+ V R +++ G+ D +
Sbjct: 114 SIQIQGYASKVGDPDYNLELSKKRAHAVEDELLSFEVDPKR-VTIVGYGETRLEAEGDDE 172
Query: 170 VGRQNNQRIEIQIF 183
N+R+ +
Sbjct: 173 TSHALNRRVTATVV 186
>gi|197116693|ref|YP_002137120.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
gi|197086053|gb|ACH37324.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
Length = 204
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 62/198 (31%), Gaps = 17/198 (8%)
Query: 2 IKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA---------- 50
+K L + I GC K + S T + + A
Sbjct: 7 MKLLVPVLCAGMFIYGGCAKQQTVKVDQPIAPSATTAATSATTQPAAKAAAVQPAAAPLP 66
Query: 51 -----EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
+ Q Q + ++ G + L L L
Sbjct: 67 ATKISSESIPPQSQQSVAGKAQAGASQADALETIYFDFDSSLLSDTARATLAANLEKLKA 126
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P + I+ +TD G+ NL +S+ RA K YL G +++ +SV G+ + P
Sbjct: 127 KPGAALRIEGNTDERGSDDYNLALSERRAQSAKKYLQALGFPASK-LSVVGYGEEKPAVK 185
Query: 166 NDTKVGRQNNQRIEIQIF 183
+ + N+R E I
Sbjct: 186 GEGEEIWAKNRRDEFVIV 203
>gi|163784521|ref|ZP_02179383.1| OmpA domain protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159880207|gb|EDP73849.1| OmpA domain protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 75
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD+ G+ K NL +S +RA I I S +SVRG+ PI N T GR
Sbjct: 2 IEGHTDNTGSYKLNLDLSLKRALYIMKMFIS-CGFSPDLLSVRGYGPSRPIADNSTPKGR 60
Query: 173 QNNQRIEIQI 182
N+R+E I
Sbjct: 61 AKNRRVEFVI 70
>gi|329943316|ref|ZP_08292090.1| ompA family protein [Chlamydophila psittaci Cal10]
gi|332287892|ref|YP_004422793.1| putative peptidoglycan-associated protein [Chlamydophila psittaci
6BC]
gi|313848464|emb|CBY17468.1| putative peptidoglycan-associated protein (periplasmic)
[Chlamydophila psittaci RD1]
gi|325507092|gb|ADZ18730.1| putative peptidoglycan-associated protein [Chlamydophila psittaci
6BC]
gi|328814863|gb|EGF84853.1| ompA family protein [Chlamydophila psittaci Cal10]
gi|328915156|gb|AEB55989.1| outer membrane protein, OmpA family [Chlamydophila psittaci 6BC]
Length = 191
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 76 IPVHVSFVSEVFLE-KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
++ ++ L +L + + K P + I+ HTD G NL + RA
Sbjct: 82 FRNITFATDSYTIKGEENLAILSSLVRQMQKSPKMTLYIEGHTDERGAASYNLALGARRA 141
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +K +LI++G+S++R +V + + PI+ ++ Q N+R E +I
Sbjct: 142 NAVKQHLIKQGISADRLFTVS-YGKEQPINLGHNELAWQQNRRTEFKI 188
>gi|15618690|ref|NP_224976.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
CWL029]
gi|15836314|ref|NP_300838.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
J138]
gi|16752260|ref|NP_445628.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
AR39]
gi|33242140|ref|NP_877081.1| peptidoglycan-associated lipoprotein precursor [Chlamydophila
pneumoniae TW-183]
gi|4377090|gb|AAD18919.1| Peptidoglycan-Associated Lipoprotein [Chlamydophila pneumoniae
CWL029]
gi|7190005|gb|AAF38862.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
AR39]
gi|8979154|dbj|BAA98989.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
J138]
gi|33236650|gb|AAP98738.1| peptidoglycan-associated lipoprotein precursor [Chlamydophila
pneumoniae TW-183]
Length = 192
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Query: 73 TCYIPVHVSFVSEVFLE-KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
++ ++ L +L + + K P + I+ HTD G NL +
Sbjct: 80 VAAFRNITFATDSYTIKGEENLAILTNLVHYMKKNPKATLYIEGHTDERGAASYNLALGA 139
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ IK +L ++ S +S + ++P+++ ++ Q N+R E +I
Sbjct: 140 RRANAIKEHLRKQ-GISADRLSTISYGKEHPLNSGHNELAWQQNRRTEFKI 189
>gi|307944516|ref|ZP_07659856.1| OmpA/MotB domain protein [Roseibium sp. TrichSKD4]
gi|307772265|gb|EFO31486.1| OmpA/MotB domain protein [Roseibium sp. TrichSKD4]
Length = 344
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 57/141 (40%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------ST 109
++ + +GD + + + L+ +A + + +
Sbjct: 206 EILSQRSDIRVVGDRFVFQ-SEVLFGSGSEDINPEGQVELKKLADAIKELAVQIPDEINW 264
Query: 110 VIAIQSHTD-----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD G L+NN +S RA + YL+ +G+ R ++ GF P++
Sbjct: 265 VLRVDGHTDARPLSGTGRLRNNWELSAARAISVVRYLVDQGIDPKRLVAA-GFGEFQPLE 323
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
DT N+RIE+++ R
Sbjct: 324 EGDTPEALAKNRRIELKLTER 344
>gi|303248273|ref|ZP_07334535.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
gi|302490298|gb|EFL50210.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
Length = 246
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 7/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
D+ + D + + IT P V F V L ++ L+ + L K
Sbjct: 101 DQFRSYVSTKGLDGVVAATLEAGKITIGFPAGVLFPKDGVDLTEEGKQRLRTVYDFLIKT 160
Query: 107 PSTVIAIQSHTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
I I+ TD+ ++N +S RA + Y++ G+ NR ++ G A
Sbjct: 161 AGERINIRGFTDNQPPGAGSRFRDNWEVSSLRAVAVLRYMVSLGMPPNR-LTATGLADLE 219
Query: 162 PIDTNDTKVGRQNNQRIEIQI 182
P+ NDT R NQR+E +
Sbjct: 220 PLYPNDTPAHRARNQRVEFVL 240
>gi|159185884|ref|NP_356875.2| hypothetical protein Atu3746 [Agrobacterium tumefaciens str. C58]
gi|159141018|gb|AAK89660.2| flagellar motor protein [Agrobacterium tumefaciens str. C58]
Length = 261
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + L + + +AT L + P +
Sbjct: 123 EILSDRENIRIVGDRFVFQ-SEVLFPSGGNDLNPEGQAEMAKLATALLDLAKEIPAEINW 181
Query: 110 VIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD++ G ++N +S RA + +LI +GV +NR ++ GF PI
Sbjct: 182 VLRVDGHTDNVQLTGSGRYRDNWELSSARATSVVKFLISKGVPANRLVAA-GFGEYQPIA 240
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
D+ RQ N+RIE+++ R
Sbjct: 241 EGDSPEARQQNRRIELKLTER 261
>gi|330861523|emb|CBX71733.1| putative lipoprotein yfiB [Yersinia enterocolitica W22703]
Length = 169
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 59/180 (32%), Gaps = 28/180 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + + GC + E LQ+ G
Sbjct: 15 ISFFALCLLVLVGCQAKPHQ------------------------GLTPEQIAALQEQGFK 50
Query: 65 VSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
++ + + V F S+V L + +Q I L+ + + +TD+IG
Sbjct: 51 LT--DNGWVFGLTNKVLFDSDVRKLNASGVQTVQNIGRALHNVGINHMRVDGYTDAIGED 108
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA + + I VRG P+ N T GR N+R+ I +
Sbjct: 109 GYNQQLSFQRASAVAD-TLAAIGIPRANIEVRGRGKLEPVADNRTAKGRAENRRVAIIVT 167
>gi|187251682|ref|YP_001876164.1| outer membrane protein [Elusimicrobium minutum Pei191]
gi|186971842|gb|ACC98827.1| Outer membrane protein [Elusimicrobium minutum Pei191]
Length = 172
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 67/188 (35%), Gaps = 24/188 (12%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K ++ + ++ +I+ C + + + V+ +
Sbjct: 1 MKNLIKIAMVACLVLSIAACRKNVQNDDMLADENLSAPTTVDVVVEET------------ 48
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN---KFPSTVIAIQS 115
V + + + L +L A ++ + I ++
Sbjct: 49 -----PVIIDVQNTEIALRQVNFALDKYNLSDAAKKVLADNAALIKTKTANAAFNIVVEG 103
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
H D GT+ N+ + ++RA+ +K+Y + GV + ++V + + P+ + T+ N
Sbjct: 104 HCDERGTISYNIALGEKRANEVKNYYTRLGVPAKNIVTVS-YGEEKPLCYDATENCYAKN 162
Query: 176 QRIEIQIF 183
+R E +
Sbjct: 163 RRAETVLT 170
>gi|32033646|ref|ZP_00133957.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207788|ref|YP_001053013.1| outer membrane protein precursor PalA [Actinobacillus
pleuropneumoniae L20]
gi|307249520|ref|ZP_07531507.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|126096580|gb|ABN73408.1| outer membrane protein precursor PalA [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|306858375|gb|EFM90444.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 156
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 53/179 (29%), Gaps = 30/179 (16%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K ++ + ++ C +S +N
Sbjct: 1 MKKLAKVLMIAAPAFVLAACSSSSDNANANANANANANAGQFGG---------------- 44
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + +E ++ +L A L + + H D
Sbjct: 45 --------MTAEDLQTRYNTVYFGFDSYAVEGEYQQLLDAHAAYLTSANG-KVTVAGHAD 95
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RAD +K+YL +G +S + + P T+ N+R
Sbjct: 96 ERGTPEYNIALGQRRADAVKNYLATKG---ANQVSTVSYGEEKPAVLGHTEADYAKNRR 151
>gi|238794810|ref|ZP_04638412.1| OmpA family protein [Yersinia intermedia ATCC 29909]
gi|238725890|gb|EEQ17442.1| OmpA family protein [Yersinia intermedia ATCC 29909]
Length = 169
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 59/185 (31%), Gaps = 28/185 (15%)
Query: 1 MIKELGLSMFIM--TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+I + +S F M ++GC A E L
Sbjct: 9 LISHIWISFFAMSLLILAGCQAAKPP------------------------GLTPEQIAAL 44
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q+ G ++ G + L + +Q I L + + HTD
Sbjct: 45 QEQGFKLTDNGWEFGL-ANKVLFDSDVRELNPSGVQRVQKIGRALANVGIHHMRVDGHTD 103
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
SIG N +S ERA + L I VRG P+ N T GR N+R+
Sbjct: 104 SIGEDGYNQQLSLERASAVADALAT-IGIPRANIDVRGRGKLEPVADNHTPKGRAENRRV 162
Query: 179 EIQIF 183
+ +
Sbjct: 163 SMIVT 167
>gi|298209291|ref|YP_003717470.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
gi|83849218|gb|EAP87087.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
Length = 665
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 58/149 (38%), Gaps = 8/149 (5%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
S + + + + ++ + + + + L +
Sbjct: 515 TTPTESQMVELDLMLEKEIVKAEV---GDDIGKLLKLEPIYFDFDKHNIRPDAAVELAKV 571
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
++N++P I ++SHTDS G N+ +S+ R +Y+++RG S ++ RG+
Sbjct: 572 IAVMNEYPEMKIDVRSHTDSRGKDDYNMRLSERRNKSTINYIVERGGISRDRLTGRGYGE 631
Query: 160 KYPIDTND-----TKVGRQNNQRIEIQIF 183
I+ ++ + N+R E +I
Sbjct: 632 SELINECANGIPCSREKHELNRRSEFRIV 660
>gi|332532726|ref|ZP_08408600.1| outer membrane protein similar to peptidoglycan-associated
(lipo)protein [Pseudoalteromonas haloplanktis ANT/505]
gi|332037753|gb|EGI74203.1| outer membrane protein similar to peptidoglycan-associated
(lipo)protein [Pseudoalteromonas haloplanktis ANT/505]
Length = 351
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 68/180 (37%), Gaps = 8/180 (4%)
Query: 15 ISGCGLASREKKKVF-----LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
+ G A E+ K + + + + + TG +
Sbjct: 172 LFGQNSAPVEQVKPAPEVVEVAVAPADSDNDNIADADDKCPNTPMTDAVDGTGCTLYEDK 231
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
++ + + + ++L ++ ++ L ++P T + ++ HT ++G N +
Sbjct: 232 EVTVSLL--VTFPNNASAVSTQYLDDIEKVSAFLKEYPDTTVLLEGHTSAVGKATYNKWL 289
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
S++RAD + L+ + I+ G + + +TK N+R+E I N+K
Sbjct: 290 SKKRADAVAKQLVA-DGIAEDRITTVGLGEERLKNDANTKAANAENRRVEAHIKTIKNVK 348
>gi|145219968|ref|YP_001130677.1| OmpA/MotB domain-containing protein [Prosthecochloris vibrioformis
DSM 265]
gi|145206132|gb|ABP37175.1| OmpA/MotB domain protein [Chlorobium phaeovibrioides DSM 265]
Length = 152
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 1/106 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + L A + + S + I+ H D GT + N+ + + RA
Sbjct: 46 LGDVFYDFDQASIRMDAAEQLSKNAAWMQEKSSKRVVIEGHCDERGTSEYNMALGERRAS 105
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ K Y++ GV R +V + + P + N+R
Sbjct: 106 MAKEYMVNLGVQPERMTTVS-YGEERPFAAGSNEEAWALNRRAHFV 150
>gi|320156521|ref|YP_004188900.1| outer membrane protein-like peptidoglycan-associated (lipo)protein
[Vibrio vulnificus MO6-24/O]
gi|319931833|gb|ADV86697.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Vibrio vulnificus MO6-24/O]
Length = 208
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 80/197 (40%), Gaps = 10/197 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L + +T + +AS + + + D + D + + DT
Sbjct: 1 MKAFILPLVCLTFAATPVIASDKADEYDYLATPRADQLADLQDQDRDGVINA-RDLCPDT 59
Query: 62 GIVVSRIGDMI------TCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQ 114
D + + + V F ++ + F ++ ++ L +PST I +Q
Sbjct: 60 PSTAEIDNDGCGTYVKTSQQMQIRVLFANDSDKINPVFRKQIKEMSEFLKLYPSTSIELQ 119
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ G ++NL +S+ RA+ ++ LI G++ +R + + GF +V
Sbjct: 120 GYASRTGNAEHNLDLSKRRANNVREMLIGYGIAQSR-VRIVGFGDSALASEGTDEVSHAL 178
Query: 175 NQRIEIQIFP-RGNIKK 190
N+R+ + +G++K+
Sbjct: 179 NRRVVASVVGYKGDVKE 195
>gi|167590675|ref|ZP_02383063.1| hypothetical protein BuboB_35381 [Burkholderia ubonensis Bu]
Length = 394
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 50/133 (37%), Gaps = 7/133 (5%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
++ + V T F + + P++ IA + + P + +
Sbjct: 264 EIAAGTVSVDEDARHSTVTFRGDAMFPPGKAAVNASSGPLIAKIAAEIARVPG-KVTVLG 322
Query: 116 HTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+TD+ + S RA + L GV +NR ++ G PI N T G
Sbjct: 323 YTDNAPVRGSAFPSNEALSDARATQVMQMLQAAGVPANR-LAALGKGAANPIGDNRTVPG 381
Query: 172 RQNNQRIEIQIFP 184
R N+R+EI + P
Sbjct: 382 RALNRRVEITVAP 394
>gi|89890649|ref|ZP_01202159.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
gi|89517564|gb|EAS20221.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
Length = 663
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 6/124 (4%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V I + L I + +P T + I+SHTDS
Sbjct: 532 VDCDDIAPLLNIKDIYFDFDRFNIRPDAALELSKILAFMELYPQTSVEIRSHTDSRAPDA 591
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIE 179
N ++S++RA + +LI++G+S++R ++ +G+ + ++ T Q N+R E
Sbjct: 592 YNDVLSEKRAQSTRKWLIEKGISASR-LTAKGYGERQLVNNCSNGVDCTPEEHQLNRRSE 650
Query: 180 IQIF 183
+
Sbjct: 651 FIVT 654
>gi|315125812|ref|YP_004067815.1| flagellar motor protein MotB [Pseudoalteromonas sp. SM9913]
gi|315014326|gb|ADT67664.1| flagellar motor protein MotB [Pseudoalteromonas sp. SM9913]
Length = 306
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 7/174 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S + + + ++ + K + + Q+ D I + +G I I + S
Sbjct: 128 SSSTSEEVAAATAVSAADQEQINDLVKKIAQQLEKQIIDGAIELESLGQQIIIRIRENGS 187
Query: 82 FV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADV 136
F FL+ +F P++Q I +L P I + HTD S NN +S +RA
Sbjct: 188 FPSGSAFLQPQFKPIIQDIGRLLKDVPG-EITVSGHTDDFQVSNELYINNWDLSSKRAVA 246
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ S L + + V G A P+ ND++ R+ N+R+EI I +G K+
Sbjct: 247 VASELQKVPGFDKTRMMVVGRAETRPLVPNDSREDRRRNRRVEISIL-QGKAKE 299
>gi|83859947|ref|ZP_00953467.1| flagellar motor protein [Oceanicaulis alexandrii HTCC2633]
gi|83852306|gb|EAP90160.1| flagellar motor protein [Oceanicaulis alexandrii HTCC2633]
Length = 338
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 46/163 (28%), Gaps = 13/163 (7%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
R + L V +GD + L ++
Sbjct: 178 AALASEVARLARYRSEFFGRLIEVL-GDRSGVRVVGDRFVFE-TDVLFASGSAELSEEGR 235
Query: 94 PMLQLIATILNKFPS-------TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG- 145
L IA + + V+ + HTD + N S +S +
Sbjct: 236 RSLAPIADAIIQLTDEIPDDLDWVLRVDGHTDRVPLGPNAPFESNWELSTARSLSVIAYF 295
Query: 146 ---VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
R + GF YPI T+ N+RIE+++ R
Sbjct: 296 ESRGVPPRRLLAAGFGEHYPIAEGRTQEAYARNRRIELKLTSR 338
>gi|320538522|ref|ZP_08038383.1| OmpA family protein [Treponema phagedenis F0421]
gi|320144629|gb|EFW36384.1| OmpA family protein [Treponema phagedenis F0421]
Length = 1347
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 63 IVVSRIGDMITCYIPVHVSFVS--------EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+++ R G+ + +P + + + + K +L+ IA ILNKFP I ++
Sbjct: 1215 VLIIRDGNRLKIAVPSIIFRKNEPDFQDLPQATVNKNLQ-VLKRIAQILNKFPDYKIRVE 1273
Query: 115 SHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
H ++ + L +S++RA+ I+ YLI+ GV ++R ++ G P+ +
Sbjct: 1274 GHANTTTGTLREEREYLLPLSEKRAEAIRQYLIENGVRASR-LTAEGKGGTEPVADFTDR 1332
Query: 170 VGRQNNQRIEIQIF 183
N+R+E +
Sbjct: 1333 NNWWKNRRVEFILI 1346
>gi|75674700|ref|YP_317121.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
gi|74419570|gb|ABA03769.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
Length = 463
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 1/119 (0%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + + L + +L + + + I I HTDS G
Sbjct: 344 TVCQQLFGELLEKRTIQFEAGQATLHLDSIGLLDQLTETALRCQTATIEIVGHTDSDGDA 403
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA + + + + G PI TNDT G+ N+RI+ +
Sbjct: 404 SFNQTLSERRAQAVVD-FLVKAGLPANRFTPMGRGSAQPIATNDTDEGKAKNRRIDFIV 461
>gi|332995422|gb|AEF05477.1| OmpA/MotB [Alteromonas sp. SN2]
Length = 393
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 59/173 (34%), Gaps = 18/173 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC L + V K D ++ G V + + +
Sbjct: 234 GCALKDADNDGVVDAKDMCPDTAAGV--------------KVDAKGCTV-FDEETVEITL 278
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ P + A + ++ +T I+ HT + G+ N+ +S++RA
Sbjct: 279 R-VLFDNESSVVKAPRDPEISEFAEFMKQYTNTTAVIEGHTSAPGSEAYNMDLSEDRAAS 337
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
K ++ + G+ +DT + N+RI + + + +K
Sbjct: 338 FKEVMVDMYDIDASRLETVGYGETRLLDTAKNAEAHRVNRRISVTV--KDTVK 388
>gi|254525016|ref|ZP_05137071.1| OmpA family protein [Stenotrophomonas sp. SKA14]
gi|219722607|gb|EED41132.1| OmpA family protein [Stenotrophomonas sp. SKA14]
Length = 212
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 17/189 (8%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L + + G E + + KR L E L + +
Sbjct: 25 VLLGAFVLILVGVVAVQLELSQRLDQEVKQRQAEAKR----LQTLEQALAGPLAAGRVTL 80
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV---IAIQSHTDSIGT 122
I I + ++ L+ + +L+ +A L + + + + TD
Sbjct: 81 --IDGRIGIS-GSVLFALNSDQLQPEGQELLRSLAAPLAAYLGSREEILMVSGFTDDAPV 137
Query: 123 LK------NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+ +N +S +R+ + LI GV ++ + F + P+ +N ++ GR N+
Sbjct: 138 REGNRRFADNWELSAQRSLTVTRTLIADGVPADAVFAAA-FGSEQPVSSNASEDGRARNR 196
Query: 177 RIEIQIFPR 185
R+EI P+
Sbjct: 197 RVEIAPIPK 205
>gi|170724980|ref|YP_001759006.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169810327|gb|ACA84911.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 229
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 6/130 (4%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
L G+V G+ + + L + +L +A L + P VI +
Sbjct: 104 EYLSSNGLVEFGSGEGLLARV---YFDFDSKSLTPESRLILDKVAKRLVQAPE-VIKLVG 159
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD+ G+ + N + RAD + + + + PI +N+ GR N
Sbjct: 160 HTDNSGSEEYNYSLGLLRADNA-QTYLNKQGVRDTQLKSESQGETRPIASNENLDGRALN 218
Query: 176 QRIEIQ-IFP 184
+R+E+ + P
Sbjct: 219 RRVELLQVTP 228
>gi|258593789|emb|CBE70130.1| Outer membrane lipoprotein omp16 precursor
(peptidoglycan-associated lipoprotein) (modular protein)
[NC10 bacterium 'Dutch sediment']
Length = 184
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 47/147 (31%), Gaps = 1/147 (0%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
D + + ++ +++ + + + + +
Sbjct: 36 GDSTSMQSEEAVKQSKSIQERPVAGAPSAQQPATAGKESPLKDIFFDFDKSTIRDDAKSS 95
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L LN P+ I I+ H D GT + NL + + RA K + + + I
Sbjct: 96 LNEDLQWLNANPTAQIVIEGHCDERGTAEYNLGLGERRAKAAKD-YVMAAGINAKRIRTV 154
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
F + P T + + N+R +
Sbjct: 155 SFGKERPFATGHDESAWKWNRRAHFVV 181
>gi|149925995|ref|ZP_01914258.1| OmpA/MotB [Limnobacter sp. MED105]
gi|149825283|gb|EDM84494.1| OmpA/MotB [Limnobacter sp. MED105]
Length = 179
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 9/180 (5%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K + + + G S + V + + G ++A +E + G
Sbjct: 4 KHILKLALLAPVLIGLHAPSHAESLVVDLADTVPAVEQVKEGLFPEEACEELRK----NG 59
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV--IAIQSHTDSI 120
+ IP + L + L + A +L+ PS I + H D+
Sbjct: 60 FKCMGFKPAVRFSIPNAHFQLGSAELPAELKKQLDVFAQVLSNRPSDSPPIVVTGHADAS 119
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G N ++S ERA + + + S R + V G + +D N+ N+R+EI
Sbjct: 120 GDASLNQVLSSERAKAV-KTYLTQKGVSPRLLRVEGKGAEKLVDVNNPFA--PANRRVEI 176
>gi|260431107|ref|ZP_05785078.1| peptidoglycan-associated lipoprotein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260414935|gb|EEX08194.1| peptidoglycan-associated lipoprotein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 167
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 59/178 (33%), Gaps = 22/178 (12%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
++ + ++ C S GS D + Q +
Sbjct: 7 IAALGALALVTACSNNDPSALGGAGGGSGSI-----VPGSPNDPRSPAYFQQAVGDRV-- 59
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ V + L + +LQ A L I+ H D GT +
Sbjct: 60 --------------LFAVDQSTLSSEAQSILQGQADWLLANTDYTATIEGHADEQGTREY 105
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
NL + RA+ + +LI RGV+ NR +V + + PI+ T+ N+R +
Sbjct: 106 NLALGARRANAAREFLISRGVAGNRLQTVS-YGKERPIEICSTEECYSKNRRAVTVLT 162
>gi|150397861|ref|YP_001328328.1| hypothetical protein Smed_2663 [Sinorhizobium medicae WSM419]
gi|150029376|gb|ABR61493.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419]
Length = 342
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + L + + +A + + P +
Sbjct: 204 EILSDRENIRIVGDRFVFQ-SEVLFPSGGNELNPEGQAEMTKLAAAILDLAREIPAEINW 262
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD IG ++N +S RA + +LI +GV ++R ++ GF PI
Sbjct: 263 VLRVDGHTDDVQLSGIGRFRDNWELSSARATSVVKFLISKGVPADRLVAA-GFGEYQPIA 321
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
+DT+ R N+RIE+++ +
Sbjct: 322 PSDTQEARAQNRRIELKLTEK 342
>gi|209695194|ref|YP_002263123.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
gi|208009146|emb|CAQ79386.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
Length = 355
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ +IT Y+ + + + K +L L+ + + ++I HTD+IG+
Sbjct: 220 CPIPNERQIITAYVDDELFDSNSTTITKP--ELLDPFIARLHYYSESTLSIIGHTDAIGS 277
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N +S++RA+ + Y I + SN IS +G K PI N+T+ GR N+R+E++
Sbjct: 278 EAYNQSLSEKRAESVAKYFI-KSGISNNRISTQGRGEKDPIAPNNTQNGRYLNRRVELR 335
>gi|194337186|ref|YP_002018980.1| peptidoglycan-associated lipoprotein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309663|gb|ACF44363.1| peptidoglycan-associated lipoprotein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 157
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 38/106 (35%), Gaps = 1/106 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L + L+ + + I+ H D GT + NL + Q RA+
Sbjct: 51 LGDVFYDFDRSELRADAVEQLKTNFNWIQANTEKSVIIEGHCDERGTAEYNLALGQRRAN 110
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
K Y++ GV+ R +V F + P + N+R
Sbjct: 111 SAKDYIVNLGVAPVRLKTVS-FGEEKPFADGSNEEAWAQNRRAHFV 155
>gi|152982349|ref|YP_001354513.1| hypothetical protein mma_2823 [Janthinobacterium sp. Marseille]
gi|151282426|gb|ABR90836.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 1376
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 66/206 (32%), Gaps = 24/206 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSN---------DTDIVNKRFGSSLDKAE 51
M + +++ I +G + + T++
Sbjct: 2 MFRPHTIALAISMLFAGPSTWADTDVDGKRIDNGRIDLYSVPPPTEVQPAIAYPMPSGVT 61
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPV----HVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+++++ V ++ + + + L L + ++
Sbjct: 62 RAEAIEMRNRAAQVPAAQADMSKSLQEAKGLSLFVSGKADLTPSAKESLDALVAEIHARK 121
Query: 108 S----TVIAIQSHTDSIG-------TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
IA+ HTD+ G +N +S+ RA + +YL Q + S+ G
Sbjct: 122 GVIAGMRIAVVGHTDNQGLSPNAKRIFTDNQGLSEARALTVAAYLKQALNNPAITYSIDG 181
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
P+ +N T G N+R+ +Q+
Sbjct: 182 KGESQPLASNATPEGMSRNRRVALQV 207
>gi|149191161|ref|ZP_01869419.1| hypothetical protein VSAK1_02239 [Vibrio shilonii AK1]
gi|148834999|gb|EDL51978.1| hypothetical protein VSAK1_02239 [Vibrio shilonii AK1]
Length = 305
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
V L + + I++++ + P I I +TD+ G NL IS++R
Sbjct: 198 ELHFQSGAVALTELQKRTIGDISSLVKRDPKIVKILIDGYTDNSGDSVANLQISKQRGSD 257
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + ++ S + I +RG +YP N T+ GR N+R+EI++ +
Sbjct: 258 VAQWFVEN-GVSKKMIEIRGHGDRYPKYDNTTEEGRDKNRRVEIRLVRK 305
>gi|237737904|ref|ZP_04568385.1| outer membrane protein OprF [Fusobacterium mortiferum ATCC 9817]
gi|229419784|gb|EEO34831.1| outer membrane protein OprF [Fusobacterium mortiferum ATCC 9817]
Length = 1511
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIG 121
+ S+ IT + F + L +++ + +N+ I I+ +TD++G
Sbjct: 1389 VSSSKKDSSITLRTKSYFEF-DKAELNNNSKKVIEKFSEEINRDNLKGKIKIEGYTDNVG 1447
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N +S ERA + L ++ +S+ + G PI N+T+VGR N+R+EI+
Sbjct: 1448 KSSYNEKLSLERATKVAEELKKQVKNSDTEYEILGKGASNPIGNNETEVGRAKNRRVEIE 1507
>gi|190893330|ref|YP_001979872.1| outer membrane protein (OmpA protein) [Rhizobium etli CIAT 652]
gi|190698609|gb|ACE92694.1| probable outer membrane protein (OmpA protein) [Rhizobium etli CIAT
652]
Length = 343
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + L + + +AT L + P +
Sbjct: 205 EILSDRENIRIVGDRFVFQ-SEVLFPSGGADLNPEGQTEMAKLATALLDLAKEIPPEINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI +GV ++R ++ GF PI
Sbjct: 264 VLRVDGHTDNVPLVGTGRYRDNWELSSARATSVVKFLIGQGVPADRLVAA-GFGEFQPIA 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
D R N+RIE+++ +
Sbjct: 323 PGDAPDARATNRRIELKLTEK 343
>gi|84688003|ref|ZP_01015866.1| OmpA family protein [Maritimibacter alkaliphilus HTCC2654]
gi|84663984|gb|EAQ10485.1| OmpA family protein [Rhodobacterales bacterium HTCC2654]
Length = 142
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 6/114 (5%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + L + L+ + A+ HTDS + + N+
Sbjct: 28 EKNTCAVQNTDVLFKTDSYQLTAQGQQWLRQ---FFASAGAFAYAVYGHTDSRASDEYNM 84
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+SQ RA+ + Q G +R V GF + PI N++ Q N+R+EI
Sbjct: 85 RLSQNRANTVAGVARQSGAVVDR---VVGFGERRPIAPNNSAANMQKNRRVEIV 135
>gi|24217389|ref|NP_714872.1| outer membrane protein OmpA [Leptospira interrogans serovar Lai
str. 56601]
gi|45655825|ref|YP_003634.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|24202471|gb|AAN51887.1| OmpA-family protein [Leptospira interrogans serovar Lai str. 56601]
gi|45602796|gb|AAS72271.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 383
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q++ S V + + + K+ P L +A + + S + + HT
Sbjct: 259 QNSTEEFSSNPQFREIESNVIRFEKNSIQIHKESRPSLNRLARWMKQDSSIRVKVIGHTS 318
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ N +S RA +++Y+ S + PI N + G++ N+R+
Sbjct: 319 LEGSEDANQKVSLLRAQTVRNYIAGN-GISKDRFEIIPKGASVPIGDNSKEEGKEMNRRV 377
Query: 179 EIQI 182
E++I
Sbjct: 378 ELRI 381
>gi|312882154|ref|ZP_07741903.1| hypothetical protein VIBC2010_06184 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370200|gb|EFP97703.1| hypothetical protein VIBC2010_06184 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 215
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L L +A L + IAI+ HTD+ G+ N + RA
Sbjct: 106 FGFDQSNLTAMGRDALSQLAESLK-NEDSAIAIEGHTDNKGSEGYNQALGLRRALAASGA 164
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L+ GV +NR + VR + PI TN T+ GR N+R EI+
Sbjct: 165 LLTEGVDANRIV-VRSYGENLPIATNSTEEGRAQNRRSEIK 204
>gi|153832075|ref|ZP_01984742.1| flagellar motor protein [Vibrio harveyi HY01]
gi|148871690|gb|EDL70531.1| flagellar motor protein [Vibrio harveyi HY01]
Length = 430
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 53/173 (30%), Gaps = 10/173 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED---EFQMQLQDTGIVVSRIGDMITCY 75
+ L + K D AE ++ + V + D +
Sbjct: 257 ASNQTFTNLINLIAPAQVESTVKTDSQVTDIAERVSMYLATEISKGLVTVDALPDRVRIS 316
Query: 76 IP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLIS 130
I + + + P++ +A L I + HTD +N +S
Sbjct: 317 IKAQDLFESGSAEVVEYIQPVISKLARTLEATEG-KILVAGHTDDKPIFTSKYPSNWHLS 375
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + LI R + G P+ N + R N+RIEI +
Sbjct: 376 LARATAMSEQLIANSALEGRVL-PEGLGDARPLVENTSDENRALNRRIEIDLM 427
>gi|313802740|gb|EFS43958.1| OmpA family protein [Propionibacterium acnes HL110PA2]
Length = 368
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 55/147 (37%), Gaps = 3/147 (2%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D+ ++ + V++ I + + ++ ++
Sbjct: 221 DLAGVDVSKFVNALVTTTGDASDASRERVTKESMKIDLDA-SVLFDLDSDVVKPAGRQII 279
Query: 97 QLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
A L S I + +TDS G+ +NL +S+ RA L + ++
Sbjct: 280 DRTAKQLVARKVSGKIEVTGYTDSSGSASHNLDLSRRRAASGAKVLGSQLSKGITLVTA- 338
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G P+ +ND++ GR+ N+R+ I +
Sbjct: 339 GKGEADPVTSNDSEAGRRLNRRVTITV 365
>gi|291613389|ref|YP_003523546.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
gi|291583501|gb|ADE11159.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
Length = 163
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 61/180 (33%), Gaps = 21/180 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L + + C + + + L K E Q + +
Sbjct: 1 MKKLA-VILASLMVVACASTQKTNTSQANENNATASAAAAKV--DLGKLNAEIQQMEKQS 57
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
++ ++ +++ ++Q A L + V+ +Q + D G
Sbjct: 58 -----------------DYFDFNKYTVKSEYMNVIQKEAEFLKTHKNDVVTLQGNADERG 100
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ K NL + + RAD + ++++ I + P T + + N+R++
Sbjct: 101 SEKYNLGLGENRADAVAK-VLEKDGVPADQIKMVSLGKDKPRLTCHKEKCWKENRRVDFL 159
>gi|310815074|ref|YP_003963038.1| OmpA domain protein [Ketogulonicigenium vulgare Y25]
gi|308753809|gb|ADO41738.1| OmpA domain protein [Ketogulonicigenium vulgare Y25]
Length = 708
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L ++ +A +L P I + +TDS G + NL +SQ+RAD + +
Sbjct: 508 FDPGSAQIAGSSLRVIDAMADVLRGCPVDLPIRVAGYTDSQGRAEMNLRLSQDRADAVLA 567
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
L R V + + GF PI +ND++ GR+ N+RI +
Sbjct: 568 ALRMRRVPVSS-FTAVGFGAADPIASNDSEEGREANRRIAFSLIEEE 613
>gi|188997203|ref|YP_001931454.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932270|gb|ACD66900.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 260
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+++ ++K++LP L ++A L P + I+ +TD+IG+ K N ++ +RA +K
Sbjct: 155 FYLNSSKIKKEYLPYLNIVAKYLKTHPDVKVKIKGYTDNIGSKKYNDKLALKRAKTVKQ- 213
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ + S I + G I +N+ ++ R N+R E I
Sbjct: 214 YLVKLGVSPNRIMIDGVGKSEYIVSNNNELDRFTNRRAEFYIIN 257
>gi|260576643|ref|ZP_05844630.1| peptidoglycan-associated lipoprotein [Rhodobacter sp. SW2]
gi|259021128|gb|EEW24437.1| peptidoglycan-associated lipoprotein [Rhodobacter sp. SW2]
Length = 177
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + L + L A LN I I+ H D GT + NL + RA
Sbjct: 67 DRVFFAVDQSNLSDQARATLAGQAQWLNTNRDYAIIIEGHADEQGTREYNLALGARRASA 126
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+++YLI +GV+++R +V + + PI+ T+ N+R + + G
Sbjct: 127 VQNYLISQGVTASRMRTVS-YGKERPIEVCSTEDCYSRNRRA-VTVLSMG 174
>gi|149370425|ref|ZP_01890114.1| putative flagellar motor protein MotB [unidentified eubacterium
SCB49]
gi|149355976|gb|EDM44533.1| putative flagellar motor protein MotB [unidentified eubacterium
SCB49]
Length = 286
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-----KN 125
+ I + F + K P+L+ +A ++N P+ + ++ HTDS K+
Sbjct: 155 VMITISDKMLFNSGSYRINAKANPLLEKLAALINSEPALEVMVEGHTDSQTVKPGAIVKD 214
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S ER+ + L + + + G + +P+ NDTK GR N+R I I P
Sbjct: 215 NWDLSVERSTAVIRKLQDQYNVAPEKLIAAGRSSYHPVTENDTKDGRSKNRRTRIVILPN 274
>gi|23013938|ref|ZP_00053784.1| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum
MS-1]
Length = 218
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 63/198 (31%), Gaps = 19/198 (9%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ L M + + K + DI + + L E Q+ G+
Sbjct: 23 ITLLMAFFIVLVSMSKIDKNKYEQVQQG-MAKDIGLRETKTPLQDLRSEMLGQVTGAGVE 81
Query: 65 ----VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHT 117
V R I + F + + LP+++ I+ L + F + I IQ HT
Sbjct: 82 DTVDVGRDDKGIVLNLASGTMFKPGSAEVRPEILPLMKEISATLKQERFLNYQIDIQGHT 141
Query: 118 DSIGTLKNNLLISQERADVIKS----YLIQRGVSSNRFISVRGFAYKYPIDTNDT----- 168
D S ++ ++ + + A P N +
Sbjct: 142 DDTPVR-TPQFPSNWDLSAARALSTLKVMNELGIPTNRMKLAALADTAPRVPNRSDTGKA 200
Query: 169 -KVGRQNNQRIEIQIFPR 185
+ N+R+EI I+PR
Sbjct: 201 YPENQAINRRVEIHIYPR 218
>gi|327188824|gb|EGE56018.1| putative outer membrane protein (OmpA protein) [Rhizobium etli
CNPAF512]
Length = 343
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + L + + +AT L + P +
Sbjct: 205 EILSDRENIRIVGDRFVFQ-SEVLFPSGGADLNPEGQTEMAKLATALLDLAKEIPPEINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI +GV ++R ++ GF PI
Sbjct: 264 VLRVDGHTDNVPLAGTGRYRDNWELSSARATSVVKFLIGQGVPADRLVAA-GFGEFQPIA 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
D R N+RIE+++ +
Sbjct: 323 PGDAPDARATNRRIELKLTEK 343
>gi|332160220|ref|YP_004296797.1| putative lipoprotein [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|318607214|emb|CBY28712.1| integral membrane protein YfiB [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664450|gb|ADZ41094.1| putative lipoprotein [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 169
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 59/180 (32%), Gaps = 28/180 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + + GC + E LQ+ G
Sbjct: 15 ISFFALCLLVLVGCQAKPHQ------------------------GLTPEQIAALQEQGFK 50
Query: 65 VSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
++ + + V F S+V L + +Q I L+ + + +TD+IG
Sbjct: 51 LT--DNGWVFGLANKVLFDSDVRKLNASGVQTVQNIGRALHNVGINHMRVDGYTDAIGED 108
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA + + I VRG P+ N T GR N+R+ I +
Sbjct: 109 GYNQQLSFQRASAVAD-TLAAIGIPRANIEVRGRGKLEPVADNRTAKGRAENRRVAIIVT 167
>gi|75676928|ref|YP_319349.1| hypothetical protein Nwi_2744 [Nitrobacter winogradskyi Nb-255]
gi|74421798|gb|ABA05997.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
Length = 342
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 64/186 (34%), Gaps = 16/186 (8%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF---QMQLQDTGIVVSRIGD 70
+ +E + ++ + L + EF + + +GD
Sbjct: 159 ALDASEKKDKESQNRIADLGQRLNVALAKRVQELSRYRSEFFGRLRAILGNRPDIRIVGD 218
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---TVIAIQSHTDSIGTL 123
++ L + L +A L + PS V+ + HTD
Sbjct: 219 RFVFQ-SEVFFDTAQATLLPEGKAELDKVAGALTDLDKQIPSEIAWVLRVDGHTDVRPIK 277
Query: 124 KN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
N +S RA + YL GV R ++ GF P+D + T+ + N+RIE
Sbjct: 278 SPVFKSNWDLSAARAISVVQYLASLGVPPQRLVAA-GFGEFQPLDPDATEEAYKRNRRIE 336
Query: 180 IQIFPR 185
+++ R
Sbjct: 337 LKLTER 342
>gi|222823242|ref|YP_002574815.1| peptidoglycan-associated lipoprotein precursor [Campylobacter lari
RM2100]
gi|222538463|gb|ACM63564.1| peptidoglycan-associated lipoprotein precursor [Campylobacter lari
RM2100]
Length = 161
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 27/184 (14%)
Query: 1 MIKELGLSM-FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + S+ +SGC + + + RF +
Sbjct: 1 MKKIIFASITAFAVIVSGCATKNTSVSSSSSVDGSKGSGGSDRFENLES----------- 49
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL-NKFPSTVIAIQSHTD 118
+ + + ++ A I + + I ++ + D
Sbjct: 50 -------------LNSVANVYFDFDKFNVRSDMQKVIANNAEIFNKEAANAAIVVEGNCD 96
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N + +RA +K L+ +GVS++R ISV+ + P+ T TK N+R
Sbjct: 97 EWGTDEYNQALGLKRAKAVKESLVAQGVSADR-ISVKSYGETNPVCTERTKACDAQNRRA 155
Query: 179 EIQI 182
E ++
Sbjct: 156 EFKL 159
>gi|284032832|ref|YP_003382763.1| OmpA/MotB domain-containing protein [Kribbella flavida DSM 17836]
gi|283812125|gb|ADB33964.1| OmpA/MotB domain protein [Kribbella flavida DSM 17836]
Length = 327
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + +K + +A +L + + + HTD++G +L +SQ RAD +K+
Sbjct: 225 IFLSGTAIVNEKSRGSVVRVAALLRTCGTARVELAGHTDNLGDPSTSLPLSQRRADAVKA 284
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L++ GV + R IS RG+ P+ +N T GR N+R+EI++
Sbjct: 285 TLVRLGVPAGRIIS-RGYGEFEPVASNRTSAGRIANRRVEIRV 326
>gi|156974515|ref|YP_001445422.1| hypothetical protein VIBHAR_02232 [Vibrio harveyi ATCC BAA-1116]
gi|156526109|gb|ABU71195.1| hypothetical protein VIBHAR_02232 [Vibrio harveyi ATCC BAA-1116]
Length = 284
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + K++ L A IL PS + + H D+ GT + N ++Q+RA+ +
Sbjct: 164 DNQFAIDSAEINPKYMGHLAEAAYILRDHPSLSLVVTGHADATGTPEYNQKLAQDRAEQV 223
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
K + ++ + + P+ T R N+R+ I++
Sbjct: 224 KR-YLNVFGITSDRVQTKSVGETLPLYDGQTPAVRLTNRRVSIEVLN 269
>gi|83943938|ref|ZP_00956395.1| OmpA family protein [Sulfitobacter sp. EE-36]
gi|83845185|gb|EAP83065.1| OmpA family protein [Sulfitobacter sp. EE-36]
Length = 234
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 71/177 (40%), Gaps = 10/177 (5%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K GL + T++GC + F ++ + ++L+ ++ +
Sbjct: 16 KITGLCAALAMTVAGCVSSPDPVYTQFHREAGSLTDLGTFGNATLNN-----RLVMTGER 70
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + V+F + L+ +L+ A + +FP + HTD++G
Sbjct: 71 QYTFDLANRFASEVESTVTFAFNSAQLDGAAQAVLRRQAGWIRQFPEVRFRVYGHTDAVG 130
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-NQR 177
+ N + RA + ++L +G+S +R +V F P+ GR+ N+R
Sbjct: 131 SNSYNKALGLRRAQSVVAFLSTQGISRSRLEAVVSFGETQPLIVT---QGRERANRR 184
>gi|118588357|ref|ZP_01545766.1| hypothetical protein SIAM614_23787 [Stappia aggregata IAM 12614]
gi|118439063|gb|EAV45695.1| hypothetical protein SIAM614_23787 [Stappia aggregata IAM 12614]
Length = 321
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------ST 109
++ +S +GD + + + + L +A + + +
Sbjct: 183 EILSQRSDISVVGDRFVFQ-SEVLFDSGQEDINPEGRQELDKLADAIQELSAQIPDEINW 241
Query: 110 VIAIQSHTD-----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD G L+NN +S RA + YLI+RGV R ++ GF P++
Sbjct: 242 VLRVDGHTDARPLSGTGRLRNNWELSAARAISVVRYLIERGVDPKRLVAA-GFGEFQPLE 300
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
DT+ N+RIE+++ R
Sbjct: 301 EGDTQEALAKNRRIELKLTER 321
>gi|114767081|ref|ZP_01445964.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601]
gi|114540734|gb|EAU43800.1| OmpA domain protein [Roseovarius sp. HTCC2601]
Length = 310
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L + L IA L + P + HTD+ G+L+ N+ +S+ RAD
Sbjct: 201 LRDLRFESGSASLGDDAVASLDAIAAYLAETPDRRVLFVGHTDATGSLEANIAVSRARAD 260
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
Y+ +GV++ + S G Y P+ +N T+VGR+ N+R+E + P
Sbjct: 261 AAMDYVRGKGVAAAQLGS-EGAGYLAPVASNLTEVGREENRRVEAILLP 308
>gi|332663816|ref|YP_004446604.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332332630|gb|AEE49731.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 406
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T IP V++ L + P L + T +N P+ V+ + HT+ + +S
Sbjct: 298 TLRIPSITFAVNDTILSRASYPNLDKLLTFMNTNPAIVLEVGGHTNGLCADDYCNRLSLR 357
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + YL+++GV R V+G+ PI T NQR+EI+I
Sbjct: 358 RARAVVDYLVKKGVKPER-FQVKGYGKTQPI---STVKNDPKNQRVEIKIL 404
>gi|332528097|ref|ZP_08404128.1| hypothetical protein RBXJA2T_19116 [Rubrivivax benzoatilyticus JA2]
gi|332112668|gb|EGJ12461.1| hypothetical protein RBXJA2T_19116 [Rubrivivax benzoatilyticus JA2]
Length = 215
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 59/158 (37%), Gaps = 14/158 (8%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ + E + L + ++ G I + + L+ + +L+
Sbjct: 55 QQRQAEAQRREALEHALAVPLAAGRVTLA--GGRIGIS-GNVLFAFNSAELQPEGRQLLK 111
Query: 98 LIATILNKF---PSTVIAIQSHTDSIGTL-------KNNLLISQERADVIKSYLIQRGVS 147
+A L + V+ + TD +N +S +RA + LI+ GV
Sbjct: 112 SLAGPLAAYLSARDEVLMVSGFTDDRQVRDGGRARFADNWELSAQRALTVTRALIEDGVP 171
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
S+ + F + P+ +N GR N+R+EI PR
Sbjct: 172 SSAVFAAA-FGAEQPVASNADAAGRALNRRVEIAPTPR 208
>gi|332663673|ref|YP_004446461.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332332487|gb|AEE49588.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 846
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 70/199 (35%), Gaps = 36/199 (18%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDE--FQMQLQDTGIVVSRIGDMIT----CYIPV 78
K KV + G K ++ F L +T + D IT +
Sbjct: 487 KIKVTVPGYFPDSAQVTTIGLKETKVLEKRFFLRALPETKVKEEPEYDTITTEQPILLDN 546
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
V ++ + + P L L+ ++ K+P VI + SHTD G + N +SQ RA+
Sbjct: 547 IVYGYNDDKITPESEPDLNLVLDLMKKYPEMVIELSSHTDYRGRDEYNQDLSQRRAESA- 605
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTN-------------DT---------------KV 170
+ + ++ I +G+ P N DT +
Sbjct: 606 RKWLLQKGIASSRIQAKGYGEAQPKPVNEKMASEFLFMTPKDTLTQDFIDNLATKEEQEA 665
Query: 171 GRQNNQRIEIQIFPRGNIK 189
Q N+R E +I +G K
Sbjct: 666 AHQLNRRTEFKII-KGPTK 683
>gi|325855004|ref|ZP_08171720.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
gi|327313291|ref|YP_004328728.1| OmpA family protein [Prevotella denticola F0289]
gi|325483982|gb|EGC86922.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
gi|326945391|gb|AEA21276.1| OmpA family protein [Prevotella denticola F0289]
Length = 225
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFV-SEVFLEKKFLPMLQL 98
G +DK E L + + + + + F + L L
Sbjct: 70 IGRHMDKVARETAQTLPNARVDKVTDANGLECVKVTFDSGILFPLNGSKLSASAKNDLTK 129
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
A ++ + + +AIQ +TD+ G NL +SQ RA+ + SYL RGV+ + SV+GF
Sbjct: 130 FAALMKRNSNCDVAIQGYTDASGNDNINLPLSQRRAEAVSSYLKGRGVTGRQIRSVQGFG 189
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
PI N T Q N+R+E+ +
Sbjct: 190 SSNPI-ENKTIS--QANRRVEVYL 210
>gi|92119002|ref|YP_578731.1| hypothetical protein Nham_3542 [Nitrobacter hamburgensis X14]
gi|91801896|gb|ABE64271.1| OmpA/MotB [Nitrobacter hamburgensis X14]
Length = 343
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 13/139 (9%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---TV 110
+ + +GD ++ L + L +A L + P V
Sbjct: 207 ILGNRPDIRVVGDRFVFQ-SEVFFDTAQATLLPEGKAELDKVAGALIDLDKQIPHEIAWV 265
Query: 111 IAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ + HTD S K+N +S RA + YL+ GV R ++ GF P+D
Sbjct: 266 LRVDGHTDVRPISSPVFKSNWELSSARAISVVQYLVSLGVPPQRLVAA-GFGEFQPLDPG 324
Query: 167 DTKVGRQNNQRIEIQIFPR 185
T+ + N+RIE+++ R
Sbjct: 325 TTEDAYKRNRRIELKLTER 343
>gi|153832375|ref|ZP_01985042.1| outer membrane protein [Vibrio harveyi HY01]
gi|148871404|gb|EDL70267.1| outer membrane protein [Vibrio harveyi HY01]
Length = 284
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ V + K++ L A IL PS + + H D+ GT + N ++Q+RA+ +
Sbjct: 164 DNQFAVDSAEINPKYMGHLAEAAYILRDHPSLSLVVTGHADATGTPEYNQKLAQDRAEQV 223
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
K + ++ + + P+ T R N+R+ I++
Sbjct: 224 KR-YLNVFGITSDRVQTKSVGETLPLYDGQTPAVRLTNRRVSIEVLN 269
>gi|88800697|ref|ZP_01116256.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Reinekea sp. MED297]
gi|88776561|gb|EAR07777.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Reinekea sp. MED297]
Length = 294
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
L+ + L I T L P I + H+DS+GT +N +S+
Sbjct: 166 IRQSTVRFDGGGDGLDARARSQLDDIVTYLKADPLITAIYVDGHSDSVGTRYDNRRLSER 225
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA + + I R +YPI +N+T GR N+R+ +Q
Sbjct: 226 RAYRVTD-YLVNAGIDAAMILTRYHGERYPIASNETAAGRAQNRRVTLQ 273
>gi|134094541|ref|YP_001099616.1| flagellar motor protein MotD [Herminiimonas arsenicoxydans]
gi|133738444|emb|CAL61489.1| putative flagellar motor protein MotD [Herminiimonas
arsenicoxydans]
Length = 261
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTV 110
+++ + V++ ++ I V F E L + L+ +A +LNK
Sbjct: 111 KAMAPLIREGKVRVTQTNRGVSVEINASVLFAPGEARLSAQSEKALRAVAEVLNKV-DND 169
Query: 111 IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
I ++ HTD++ +N +S RA + ++ G++ R + G P+D+N
Sbjct: 170 IQVEGHTDNVPINNAMFPSNWELSAVRASSVVRLFLESGMNEKRLV-AMGHGANQPVDSN 228
Query: 167 DTKVGRQNNQRIEIQIFP 184
+T GR N+R+++ I
Sbjct: 229 ETTEGRLRNRRVQLMILS 246
>gi|291612991|ref|YP_003523148.1| peptidoglycan-associated lipoprotein [Sideroxydans lithotrophicus
ES-1]
gi|291583103|gb|ADE10761.1| peptidoglycan-associated lipoprotein [Sideroxydans lithotrophicus
ES-1]
Length = 175
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 66/184 (35%), Gaps = 9/184 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ LS+ ++ ++ C ++ + T+ ++ T
Sbjct: 1 MKKIILSIILVNLLAACATEKPKEAATEPTPAATTETTAPATAAAEPAQT--------ST 52
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + I ++ +Q L K S + ++ + D G
Sbjct: 53 AAEAAANAEAAIPEIRSVYFPFDVDAVQDGDRAAIQAHGAYLGKNDSVKVRVEGNADERG 112
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + NL + Q RA+ +K L+ G +++ +V F + P + + N+R +I
Sbjct: 113 STEYNLALGQRRANNVKKLLVLSGAKASQVETVS-FGEEKPRCADHMESCWSQNRRADIV 171
Query: 182 IFPR 185
+
Sbjct: 172 YITK 175
>gi|83859799|ref|ZP_00953319.1| Peptidoglycan-associated lipoprotein [Oceanicaulis alexandrii
HTCC2633]
gi|83852158|gb|EAP90012.1| Peptidoglycan-associated lipoprotein [Oceanicaulis alexandrii
HTCC2633]
Length = 170
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 1/122 (0%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + G + D + + L + L+ A L+ +P I I
Sbjct: 38 EPAPEPAGPTPGSVEDFEVNAGDRVFFALDQHTLSNEARATLRRQAAWLSSYPGARILIA 97
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ D GT + NL + RA+ + +L+ +GV +R IS + + P+ T+
Sbjct: 98 GNCDERGTREYNLALGARRANAARDFLVSQGVDPSR-ISTVSYGKERPVCNQSTEQCWAT 156
Query: 175 NQ 176
N+
Sbjct: 157 NR 158
>gi|323137848|ref|ZP_08072923.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
gi|322396851|gb|EFX99377.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
Length = 477
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + + P++ + + + + I + +HTD+ G + N ++ RA V+
Sbjct: 375 IFETDDSAVAADSAPLVDALTATVLRCRAATIEVAAHTDNFGIEEINRSRTKRRAQVLVD 434
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
LI+ G +R +S G+ + P+ ND+ R N+R+E +
Sbjct: 435 RLIKAGADPSR-VSAAGYGSERPVAPNDSDENRARNRRVEFVV 476
>gi|300870393|ref|YP_003785264.1| flagellar motor protein MotB [Brachyspira pilosicoli 95/1000]
gi|300688092|gb|ADK30763.1| flagellar motor protein MotB [Brachyspira pilosicoli 95/1000]
Length = 266
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 16/179 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
S+ + G S+DKA + ++++ + VS +
Sbjct: 79 SQSKLVAGGANVDALPAMDRGYSMGRSVDKAVSVLESEIKNNKVRVSEDERGFVITLGAD 138
Query: 80 VSFVSEVFL---EKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQE 132
F S + IA++L+ P+ I I+ HTDS G++ +
Sbjct: 139 QYFESASTNIVNTQNNTETFIKIASVLSTLPN-DIRIEGHTDSGAILEGSITEQWFGNNW 197
Query: 133 RADVIKSYLIQRGVSSN--------RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++ ++ + + SV G+A P+ +ND GR N+R++I +
Sbjct: 198 GLSTARAIVVLEKLFESDQTGKLDINKYSVAGYADTRPVASNDLPDGRALNRRVDIVVV 256
>gi|296159295|ref|ZP_06842121.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. Ch1-1]
gi|295890554|gb|EFG70346.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. Ch1-1]
Length = 443
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 7/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
++ + ++ + V + + ++ P++ IA + K
Sbjct: 306 LKELLKNEIAAGTVSVDEDAHHSSVTFRGDSMFPPGAAAVKTSMTPLITKIAGEIAKVSG 365
Query: 109 TVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+++ +TD++ S+ERA I L GV + R + G P+
Sbjct: 366 -KVSVLGYTDNVPIKSRQFASNAALSEERATQIMQMLQTAGVPAVR-LEAVGRGDADPVG 423
Query: 165 TNDTKVGRQNNQRIEIQI 182
N T GR N+R+EI +
Sbjct: 424 DNTTVQGRAQNRRVEITV 441
>gi|260425871|ref|ZP_05779850.1| OmpA family protein [Citreicella sp. SE45]
gi|260420363|gb|EEX13614.1| OmpA family protein [Citreicella sp. SE45]
Length = 203
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 6/134 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D AE ++ G V ++ + + ++
Sbjct: 73 DGAEGYAVSRVTRDGRPVCHDINVCGTLNSDQYFATDSYAISPQGQARIRE---FFRNAT 129
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I HTD+ + N +S RA+ + G R + VRG+ YP+ TN
Sbjct: 130 AFGFIITGHTDARASDAYNRRLSYNRANSVARVARSAG---ARIVDVRGYGESYPVATNS 186
Query: 168 TKVGRQNNQRIEIQ 181
T G N+R+EI
Sbjct: 187 TAEGMARNRRVEIL 200
>gi|260426228|ref|ZP_05780207.1| OmpA family protein [Citreicella sp. SE45]
gi|260420720|gb|EEX13971.1| OmpA family protein [Citreicella sp. SE45]
Length = 219
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 66/163 (40%), Gaps = 13/163 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ +G++ + ++GCG E + ++ D N +++ +
Sbjct: 7 MIRIGIAGLALLLVTGCGA---EFYREAGATTDRGDFGNATMNNTM---------LMNGD 54
Query: 62 GIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
V +G +P V+F + L+ L++ A + +FP + HTD +
Sbjct: 55 RSYVLDLGQRFAEDVPSMVNFAFNSSQLDAGARETLRVQAGWIRQFPEVRFRVYGHTDLV 114
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
G+ N + RA + +YL +G+S +R +V + P+
Sbjct: 115 GSASYNRQLGLARAQAVVAYLASQGISRSRLEAVVSYGETQPL 157
>gi|224531999|ref|ZP_03672631.1| outer membrane protein [Borrelia valaisiana VS116]
gi|224511464|gb|EEF81870.1| outer membrane protein [Borrelia valaisiana VS116]
Length = 389
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 2/130 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ Q I V + I + + + +K L +IA +L KF + I+
Sbjct: 262 QEKQIKSINVEKNNKGINLSFDIE-FYPDSFQILQKEYKKLDIIAELLEKFKKNNLLIEG 320
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HT+ G + +S++RA I +YLI+ V + I +G+ K P + + + N
Sbjct: 321 HTEHFGLEEEMHELSEKRARAIGNYLIKMRVKNKDQILFKGWGSKKPKYPKSSPL-KAKN 379
Query: 176 QRIEIQIFPR 185
+R+EI I
Sbjct: 380 RRVEITILNN 389
>gi|328884733|emb|CCA57972.1| secreted protein [Streptomyces venezuelae ATCC 10712]
Length = 205
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 74/188 (39%), Gaps = 15/188 (7%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK----------RFGSSLDKAED-EFQ 55
L+ ++ G G + + D G++L A+ + +
Sbjct: 8 LAAVVLFVSVGLGPVPVARADDPPGSAGDAAPPPAIDSNAPGLMLPDGATLAPAKVLDIK 67
Query: 56 MQLQDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+++ G R + + + L + IA + K S +
Sbjct: 68 QIVEEEGGEQRRQDTNVDVTFALQAEVLFPKNSAKLTPAANARIAAIAAEIKKLGSGRVR 127
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+ TD++GT + L +S+ERA ++ ++ R + +RG++ YPI N T+ GR
Sbjct: 128 VFGFTDNLGTYAHGLKLSKERAVAVQQ-VLARSLDQGTTFDIRGYSEDYPIADNATEEGR 186
Query: 173 QNNQRIEI 180
+ N+R+EI
Sbjct: 187 KKNRRVEI 194
>gi|163786625|ref|ZP_02181073.1| putative flagellar motor protein MotB [Flavobacteriales bacterium
ALC-1]
gi|159878485|gb|EDP72541.1| putative flagellar motor protein MotB [Flavobacteriales bacterium
ALC-1]
Length = 283
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+D IVV ++ I + F + + K +L+ +A ++N PS + ++ HT
Sbjct: 141 EDEDIVVDINDTVVMISIADDMLFNTASYRVSNKADKILKKLADVINSEPSLDVMVEGHT 200
Query: 118 DSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
DS +N +S RA + L ++ + + G + P+ ND++ R
Sbjct: 201 DSRSINTAKVSDNWELSVLRATSVVKKLQKQFKVAPEQLIASGRSSYQPLVENDSRDNRA 260
Query: 174 NNQRIEIQIFPR 185
N+R I + P
Sbjct: 261 KNRRTRIILMPN 272
>gi|332186728|ref|ZP_08388471.1| type IV / VI secretion system , DotU family domain protein
[Sphingomonas sp. S17]
gi|332013380|gb|EGI55442.1| type IV / VI secretion system , DotU family domain protein
[Sphingomonas sp. S17]
Length = 475
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 61/180 (33%), Gaps = 12/180 (6%)
Query: 13 TTISGCGLASREKKKVFLHKSNDT-----DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
++ G + ++ T + + K + ++++ + V
Sbjct: 294 LMLASSGDTPSTRLAALNPEARLTLSRPAAAMPAASSAQASKLRRFLEPEIREGLVKVEE 353
Query: 68 IGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-- 124
+ + LE P+ I + + I+ H D+
Sbjct: 354 DAQTVRARTTIGQLFRSGSDELEPGREPLFHRIGRAIEDEKGG-VVIEGHADNTPVATVR 412
Query: 125 --NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N+ +S+ RA+ + + +R ++ +G PI +N G+ N+R+EI +
Sbjct: 413 FPDNMALSEARAETVAKLIRSDLSDPSR-VTTKGLGDTVPIASNADAAGKSQNRRVEIVV 471
>gi|84683658|ref|ZP_01011561.1| flagellar motor protein [Maritimibacter alkaliphilus HTCC2654]
gi|84668401|gb|EAQ14868.1| flagellar motor protein [Rhodobacterales bacterium HTCC2654]
Length = 617
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 49/156 (31%), Gaps = 14/156 (8%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+ + + L + GD + V L + +A
Sbjct: 464 DLENYRSEFFGRLRQVL-GDRDGIRIEGDRFVFS-SEVLFPVGGADLSAAGRQQIARVAG 521
Query: 102 ILNKFP-------STVIAIQSHTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSN 149
L + ++ + HTDS +N +SQ RA + Y+ +
Sbjct: 522 TLRDVASEIPPEINWILRVDGHTDSQPFRGNAEYADNWELSQARALSVVRYMQDQLGFPP 581
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ GF PI D+ N+RIE+++ +
Sbjct: 582 DRLVAAGFGEWQPIAEGDSDEALAANRRIELKLTEK 617
>gi|320354494|ref|YP_004195833.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320122996|gb|ADW18542.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
Length = 365
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 64/185 (34%), Gaps = 18/185 (9%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKA--------EDEFQMQLQDTGIVVSRIGDM 71
A + + + ++ + + + D V + D
Sbjct: 174 SAPQSANQTAASPAQPLPPAPVPEEKKQEELITKIYDLSKVALEKEQLDRFASVELVPDK 233
Query: 72 I--TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----N 125
+ + L ++ L L+ I+ ++ P +I + HTD +
Sbjct: 234 TMRIILTGDLLFASGQAELTREALVSLKKISALIKTTP-YMINVIGHTDDRPVKNARFPS 292
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI--- 182
N +S RA + +LI+ SV G++ P+ N ++ R+ N+R+E+ +
Sbjct: 293 NWELSLARAGRVARFLIEDTGLPATQFSVSGYSSFRPLKPNTSEDNRKINRRVELVLSKE 352
Query: 183 FPRGN 187
P+
Sbjct: 353 LPQAQ 357
>gi|295097172|emb|CBK86262.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 146
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 48/117 (41%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + ++ L + +Q +A+ L + HTD+ G
Sbjct: 27 ELNGDWSLGLSDKILFDKNDARLRPESETQIQTMASRLAATGLNHARMDGHTDNYGEESY 86
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S +RA+V+ + ++ RG KYPI +N T GR N+R+ + I
Sbjct: 87 NEALSLKRANVVADAWAKGANIPRSNLTTRGLGKKYPISSNRTAQGRAENRRVAVVI 143
>gi|171322789|ref|ZP_02911520.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171091861|gb|EDT37347.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 230
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L L + + + + +TDS+G+ N+ +S+ RA +
Sbjct: 122 DTNFDTDRADLTPIARDRLDRLISASRGVRVRTVTVNGYTDSVGSDDYNVGLSERRASAV 181
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+YL G+S+ RF+ RG+ P+D+N+T VGR N+R+E+++
Sbjct: 182 DAYLQSHGLSAGRFVG-RGYGKADPVDSNETAVGRARNRRVEVRL 225
>gi|149914118|ref|ZP_01902649.1| OmpA family protein [Roseobacter sp. AzwK-3b]
gi|149811637|gb|EDM71470.1| OmpA family protein [Roseobacter sp. AzwK-3b]
Length = 181
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 48/134 (35%), Gaps = 6/134 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D AE + GI V R ++ L L A
Sbjct: 51 DGAEGYMTPHVTRQGIPVCRTANLCGTVNTDQYFATDSARLGHSARQNL---ANFFASTG 107
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I HTDS + + N+ +S RA+ + S G R VRG + P +N+
Sbjct: 108 AVSYTIVGHTDSRASDEYNMDLSLRRANAVASVARSTG---ARIADVRGMGERAPKASNN 164
Query: 168 TKVGRQNNQRIEIQ 181
T G N+R+EI
Sbjct: 165 TAAGMAANRRVEIL 178
>gi|70734242|ref|YP_257882.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
gi|68348541|gb|AAY96147.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 164
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 55/178 (30%), Gaps = 26/178 (14%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L + ++GC + L+ G +
Sbjct: 11 TLVFMALLALAGCQSVPP------------------------KGLTPKQIAVLKQEGFEL 46
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ G + L + ++Q I L + + HTD+ G
Sbjct: 47 TDEGWAFGLS-GKVLFGSDVETLNQASTEIVQRIGKALLSVDIQKVRVDGHTDASGKEAY 105
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N+ +S RA + ++ + I +RG P+ +N T GR N+R+ I +
Sbjct: 106 NVQLSVRRAKSVVK-VLTQVGMREENIQLRGLGSSEPVASNSTVAGRTENRRVSIVVI 162
>gi|88800584|ref|ZP_01116145.1| chemotaxis MotB protein, putative [Reinekea sp. MED297]
gi|88776639|gb|EAR07853.1| chemotaxis MotB protein, putative [Reinekea sp. MED297]
Length = 355
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 54/160 (33%), Gaps = 12/160 (7%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKK 91
++++ E + Q QL +V +P + F + +
Sbjct: 184 QEMAAETAAMNALEAQLQTQLSQLNQEKEKLVTQLEDGTTAIKLPESILFASGRADINAE 243
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTL------KNNLLISQERADVIKSYLIQRG 145
L +AT L+ FP+ +I+IQ HTDS + +
Sbjct: 244 GRQSLANLATALSSFPNHLISIQGHTDSQTIAPATAEKYPTNWELSAARAASAVRELLKQ 303
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ G+A P+ + RQ N+RIE+ + P
Sbjct: 304 GIPADQMQAVGYADTRPLVEETSAQTRQQNRRIEVILLPN 343
>gi|54298967|ref|YP_125336.1| hypothetical protein lpp3034 [Legionella pneumophila str. Paris]
gi|53752752|emb|CAH14187.1| hypothetical protein lpp3034 [Legionella pneumophila str. Paris]
Length = 294
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 2/113 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
V V L LQ IA ++ VI I H D G N ISQ
Sbjct: 183 VKESVFHFGVDSKLLSDADKAQLQRIAQYVDADVQIDVIKIIGHADDSGRKGYNNAISQY 242
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA+ +K+YLI R R +S+ PI NDT GR N+R+ + + +
Sbjct: 243 RAESVKNYLI-RLGVPQRKLSITWVGALQPIARNDTDEGRAANRRVVVTLIKK 294
>gi|190894192|ref|YP_001984486.1| hypothetical protein RHECIAT_PB0000226 [Rhizobium etli CIAT 652]
gi|190699853|gb|ACE93936.1| hypothetical protein RHECIAT_PB0000226 [Rhizobium etli CIAT 652]
Length = 429
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 56/142 (39%), Gaps = 5/142 (3%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILN 104
S D+ + + ++++ + VS I I F S ++K FLP+L I LN
Sbjct: 286 SSDRLRNFLEPEIREGLVTVSEDPQQIVVIIRASGMFDSASPEVKKMFLPLLLRIGRSLN 345
Query: 105 KFPSTVIAIQSHTDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ + HTD+I + + +I+ + + G
Sbjct: 346 GESG-SVLLTGHTDAIPVQSLAFPSNDSLSLARASAAAEIIKSMMDDPGRVREEGRGSGE 404
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
P+ +N T GR N+RI+I I
Sbjct: 405 PVASNHTPEGRARNRRIQIIIT 426
>gi|158422120|ref|YP_001523412.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
gi|158329009|dbj|BAF86494.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
Length = 339
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 48/139 (34%), Gaps = 13/139 (9%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---STV 110
+ + +GD + L L +A+ + + P +
Sbjct: 203 ILGNRPDIRIVGDRFVFQ-SEVFFDRGSATPRPEALAELDKLASAILELERQIPPDINWA 261
Query: 111 IAIQSHTDSIGTLKNN----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ I HTDS +S RA + YLI + R + GF PIDT
Sbjct: 262 LRIDGHTDSRPISTPQFPSNWELSAARAIAVAQYLISK-GVQPRHLIAAGFGEYQPIDTG 320
Query: 167 DTKVGRQNNQRIEIQIFPR 185
+ N+RIE+++ R
Sbjct: 321 TSDESMARNRRIELKLTER 339
>gi|94987344|ref|YP_595277.1| outer membrane protein [Lawsonia intracellularis PHE/MN1-00]
gi|94731593|emb|CAJ54956.1| outer membrane protein [Lawsonia intracellularis PHE/MN1-00]
Length = 340
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ L+ +L+ ++ P + + TDS G NL +SQE
Sbjct: 231 VVVLRGVNFAFDSFALDDTAKAILEETVRLIRANPDFNVRLLGWTDSTGPDAYNLRLSQE 290
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RAD +K+ + + + + +G Y N TK GR N+R E+
Sbjct: 291 RADAVKN-FLVKMGIPSNRLFAKGMGKSYQ-YNNATKEGRYMNRRTELV 337
>gi|282159136|gb|ADA78527.1| peptidoglycan-associated lipoprotein, OmpA family [Francisella
tularensis subsp. tularensis NE061598]
Length = 206
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 61/201 (30%), Gaps = 27/201 (13%)
Query: 1 MIKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + + M ++ C + + K D SS + +L
Sbjct: 1 MKKRIINLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSS----QIYGSDKL 56
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ +++ + L A L P I + +TD
Sbjct: 57 SSDQVE-QMKKELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTD 115
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT------------- 165
G+ K N + Q+RA+ + +YL+ + + I V + P
Sbjct: 116 PRGSEKYNFNLGQKRAEAVYNYLLGK-NVNKDQICVVSYGKLKPAAEPTQFYDEFCKDGV 174
Query: 166 ND------TKVGRQNNQRIEI 180
ND ++ ++R EI
Sbjct: 175 NDACMYKASEKAFYLDRRTEI 195
>gi|242280858|ref|YP_002992987.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242123752|gb|ACS81448.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 250
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 59/156 (37%), Gaps = 10/156 (6%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIV----VSRIGDMITCYIPVH-VSFVSEVFLE 89
V+ + + E + + + + V+ + +P + +
Sbjct: 88 SASSVSAKAKKDMHALEVDIRAFISAGKMEKLMAVNTDQQGVLVRVPTRAIFKPGTAQIN 147
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQERADVIKSYLIQRG 145
K +L +A+I+ K + ++ HTD +N +S RA Y++++
Sbjct: 148 PKATVLLDKVASIMKK-KDFNLVVRGHTDDRATKNNIYSSNWELSAARAASCLRYILKKS 206
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S++ + G+A P+ N + R N+R+E
Sbjct: 207 GVSSKRLKAVGYAGTKPLVPNTSNRNRAINRRVEFY 242
>gi|254455867|ref|ZP_05069296.1| OmpA family protein [Candidatus Pelagibacter sp. HTCC7211]
gi|207082869|gb|EDZ60295.1| OmpA family protein [Candidatus Pelagibacter sp. HTCC7211]
Length = 165
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 2/126 (1%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVI 111
+ Q Q+Q + + + +P V F + L L+ A L K S I
Sbjct: 34 DIQGQMQSDVYTGTDTVEYLADGVPDRVFFATNESILTTASRETLRAQAAWLRKNSSINI 93
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
++ H D GT + NL + + RA+ K + S+ ISV + + P+D + +
Sbjct: 94 VLEGHADERGTREYNLALGERRANSAKD-YLMTYGISSDRISVLSYGKERPVDGGSSPLA 152
Query: 172 RQNNQR 177
N+R
Sbjct: 153 WSKNRR 158
>gi|187931257|ref|YP_001891241.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712166|gb|ACD30463.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 207
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 63/202 (31%), Gaps = 28/202 (13%)
Query: 1 MIKELGL---SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ + + M ++ C + + K D SS + +
Sbjct: 1 MMKKRIMNLSVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSS----QIYGSDK 56
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L + +++ + L A L P I + +T
Sbjct: 57 LSSDQVE-QMKKELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNT 115
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT------------ 165
D G+ K N + Q+RA+ + +YL+ + + I V + P
Sbjct: 116 DPRGSEKYNFNLGQKRAEAVYNYLLGK-NVNKDQICVVSYGKLKPAAEPTQFYDEFCKDG 174
Query: 166 -ND------TKVGRQNNQRIEI 180
ND ++ ++R EI
Sbjct: 175 VNDACMYKASEKAFYLDRRTEI 196
>gi|262149046|ref|ZP_06028189.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae INDRE 91/1]
gi|262031146|gb|EEY49767.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae INDRE 91/1]
Length = 133
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 42/123 (34%), Gaps = 1/123 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + + + + ML A L K PS + I+ H D
Sbjct: 11 AQGQLTEQELKEQALRENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHAD 70
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
GT + N+ + + RA + ++ +S+ + + P+ ++ N+R
Sbjct: 71 ERGTPEYNIALGERRAQAVAK-YLEALGVQAGQLSIVSYGEEKPLVLGQSEEAYAKNRRA 129
Query: 179 EIQ 181
+
Sbjct: 130 VLV 132
>gi|255530025|ref|YP_003090397.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255343009|gb|ACU02335.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 585
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 6/139 (4%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
A++ + + + + ++ + L+ + I+
Sbjct: 446 AKEPTDPGTLNKKEFLQTKENNKPIRLENIYYDFNKWDIRADAAAELEKLVQIMKDNSRI 505
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-- 167
I + SHTDS G N +SQ+RA+ +Y+I R I RG+ ++
Sbjct: 506 WIELGSHTDSRGNDAYNFTLSQKRAESAVTYMISR-GIEKNRIEARGYGETLLLNRCANG 564
Query: 168 ---TKVGRQNNQRIEIQIF 183
T+ Q N+R E +I
Sbjct: 565 IKCTEEEHQLNRRTEFKIT 583
>gi|239905906|ref|YP_002952645.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
gi|239795770|dbj|BAH74759.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
Length = 252
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 7/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
D+ + D + + IT P V F V L ++ L+ + L K
Sbjct: 107 DQFRTYVSSKGLDGVVAATLEAGKITIGFPAGVLFPKDGVDLTEEGKGKLRTLFDFLIKA 166
Query: 107 PSTVIAIQSHTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
I I+ TD+ ++N IS RA + Y++ G+ NR ++ G A
Sbjct: 167 AGERINIRGFTDNEPPGAGSRYRDNWEISSLRAVAVLRYMVSLGMPPNR-LTATGLADLE 225
Query: 162 PIDTNDTKVGRQNNQRIEIQI 182
P+ NDT R NQR+E +
Sbjct: 226 PLYPNDTPEHRARNQRVEFVL 246
>gi|207092711|ref|ZP_03240498.1| peptidoglycan associated lipoprotein precursor (omp18)
[Helicobacter pylori HPKX_438_AG0C1]
Length = 167
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 20/171 (11%), Positives = 56/171 (32%), Gaps = 6/171 (3%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
++GC K + + ++ + + + +V +
Sbjct: 2 LLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPA----PEKEEPKEEPAPVVEEKPAIES 57
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I + +++ L I + + ++ +TD G+ + N + +
Sbjct: 58 GTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDEFGSSEYNQALGVK 116
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R +K+ L+ + I F P T+ + N+R+++++
Sbjct: 117 RTLSVKNALVIK-GVEKDMIKTISFGETKPKCAQKTRECYKENRRVDVKLV 166
>gi|86143203|ref|ZP_01061605.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
MED217]
gi|85830108|gb|EAQ48568.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
MED217]
Length = 279
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 73/184 (39%), Gaps = 13/184 (7%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRF-GSSLD-----KAEDEFQMQL-QDTGIVVSR 67
++ ++++K + L K + ++ + S++ + + +D I V
Sbjct: 84 LAVMSESTKDKMRETLSKVDQNELAQAKSLEDSMNLAISYNLKKNLDDSVGEDEDIQVDI 143
Query: 68 IGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----- 121
++ + + F + K +L+ +A ++N P+ + ++ HTD
Sbjct: 144 DETVVMINVSDKLLFNSGSYRVSNKADGLLKRLADVINSEPAIKVMVEGHTDDQTVKPGA 203
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+K+N +S ER+ I L + + G + P+ N TK R N+R I
Sbjct: 204 YIKDNWELSVERSTAIIRELQDKYNVDPAKLIAAGRSSYLPLVDNATKEDRAKNRRTRIV 263
Query: 182 IFPR 185
I P
Sbjct: 264 ILPN 267
>gi|58040120|ref|YP_192084.1| peptidoglycan-associated lipoprotein [Gluconobacter oxydans 621H]
gi|58002534|gb|AAW61428.1| Peptidoglycan-associated lipoprotein [Gluconobacter oxydans 621H]
Length = 159
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q+ G D++ +++ L ++ L L K+P I + + D
Sbjct: 36 QEAGPTPGSEADLVANVGDRVFYELNQSQLSEEARATLDKQVAWLAKYPQVSIQVAGNCD 95
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
GT + N+ + Q RA+ + YL+ +GVS++R I+ + P D + N+
Sbjct: 96 DRGTEEYNIALGQRRANAARDYLVAKGVSASR-ITTISYGKDRPTADGDDEQSWAQNR 152
>gi|145297815|ref|YP_001140656.1| peptidoglycan-associated lipoprotein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850587|gb|ABO88908.1| peptidoglycan-associated lipoprotein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 174
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 68/181 (37%), Gaps = 13/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ + T + + + ++ V + + E++ + + +
Sbjct: 6 LLKGLAIALPLFTLAACSSSSDSDAAGAESGMTDGMGGVQTGGANGMLSPEEQMRQKFEA 65
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
V ++ ++ +L A+ L + PS + I+ H D
Sbjct: 66 ------------LQRDNVIYFPFDGYDIQGQYADLLDAHASYLRERPSVKVLIEGHADER 113
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + YL +S+ + + P+D + T+ N+R +
Sbjct: 114 GTPEYNIALGERRAKAVAKYLQTL-GVQAEQLSIVSYGEEKPLDLSHTEDAFAKNRRAVL 172
Query: 181 Q 181
Sbjct: 173 V 173
>gi|167622915|ref|YP_001673209.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167352937|gb|ABZ75550.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 356
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 6/142 (4%)
Query: 44 GSSLDKAEDEFQMQ---LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
G S KA+ + L + I V+ ++ + + L L +
Sbjct: 207 GQSATKAQPPVKETPVTLPEKIIPVTPKQIVLPALTVISLFDFDSSELTHSG--SLAPVI 264
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L + P + I+ +TDS G N +S+ RA + YLI I V G+ +
Sbjct: 265 ERLKQSPEAIANIKGYTDSKGNATYNQALSERRAQAVADYLIAA-GIKPEQIEVHGYGEQ 323
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
+P+ NDT R N+R+ I I
Sbjct: 324 FPLMKNDTPEHRHENRRVLIHI 345
>gi|134302256|ref|YP_001122225.1| OmpA family protein [Francisella tularensis subsp. tularensis
WY96-3418]
gi|254369037|ref|ZP_04985050.1| hypothetical protein FTAG_00877 [Francisella tularensis subsp.
holarctica FSC022]
gi|134050033|gb|ABO47104.1| OmpA family protein [Francisella tularensis subsp. tularensis
WY96-3418]
gi|157121958|gb|EDO66128.1| hypothetical protein FTAG_00877 [Francisella tularensis subsp.
holarctica FSC022]
Length = 207
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 65/202 (32%), Gaps = 28/202 (13%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ +++ + M ++ C + + K D SS + +
Sbjct: 1 MMKKRIMNLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSS----QIYGSDK 56
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L + +++ + L A L P I + +T
Sbjct: 57 LSSDQVE-QMKKELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNT 115
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT------------ 165
D G+ K N + Q+RA+ + +YL+ + + I V + P
Sbjct: 116 DPRGSEKYNFNLGQKRAEAVYNYLLGK-NVNKDQICVVSYGKLKPAAEPTQFYDEFCKDG 174
Query: 166 -ND------TKVGRQNNQRIEI 180
ND ++ ++R EI
Sbjct: 175 VNDACMYKASEKAFYLDRRTEI 196
>gi|319790060|ref|YP_004151693.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
gi|317114562|gb|ADU97052.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
Length = 254
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 12/140 (8%)
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFP-STVIAIQSHTDS 119
G + + + + V F L + L IA I+ + ++ ++ HT
Sbjct: 91 GYQIVVTENYVLIRLFNKVLFKQNSLELTPEAKRALDQIAKIIKNLKGNYMVRVEGHTSK 150
Query: 120 ------IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ ++++ +S RA + YLI RGV +R ++V G+ P+ T + + +
Sbjct: 151 DEPTVPMPNIQDSWDLSIRRATTVVRYLISRGVDPSRLMAV-GYDATRPLYTWNNPILQA 209
Query: 174 NNQRIEIQI---FPRGNIKK 190
N+R+EI I PR K
Sbjct: 210 RNRRVEIYIQVAVPREEEGK 229
>gi|254719715|ref|ZP_05181526.1| hypothetical protein Bru83_09258 [Brucella sp. 83/13]
gi|265984730|ref|ZP_06097465.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13]
gi|306837825|ref|ZP_07470687.1| Hypothetical protein BROD_0631 [Brucella sp. NF 2653]
gi|306841432|ref|ZP_07474134.1| Hypothetical protein BIBO2_1217 [Brucella sp. BO2]
gi|264663322|gb|EEZ33583.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13]
gi|306288538|gb|EFM59890.1| Hypothetical protein BIBO2_1217 [Brucella sp. BO2]
gi|306407064|gb|EFM63281.1| Hypothetical protein BROD_0631 [Brucella sp. NF 2653]
Length = 343
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---T 109
++ + +GD + + K ++ +A + + P
Sbjct: 205 EILSDKENIRIVGDRFVFQ-SEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIPDDINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI GV +NR ++ GF P+D
Sbjct: 264 VLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGEYQPLD 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
T DT R N+RIE+++ R
Sbjct: 323 TADTADARARNRRIELKLTER 343
>gi|262198423|ref|YP_003269632.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262081770|gb|ACY17739.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 1264
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 98 LIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A IL+ PS I I+ +TD G L+ NL ISQ RA++++++LI R + + G
Sbjct: 1178 EVAAILHAHPSLRLIQIEGYTDDRGDLEANLRISQHRAEIVRAFLIAR-GVAEHRLRAVG 1236
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ PI N ++ GR+ N+R+E++I
Sbjct: 1237 YGSARPIGDNRSERGRELNRRVELRIL 1263
>gi|118588324|ref|ZP_01545733.1| omp16 protein [Stappia aggregata IAM 12614]
gi|118439030|gb|EAV45662.1| omp16 protein [Stappia aggregata IAM 12614]
Length = 161
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 49/121 (40%), Gaps = 3/121 (2%)
Query: 68 IGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
G + V F + L + L A LN++ I ++ H D GT + N
Sbjct: 42 TGQDFVVNVGDRVFFEEDQSVLNAQGQATLANQAKWLNRYSQYTITVEGHADERGTRQYN 101
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ + RA + YL+ +GV+++R ++ + + P+ + N+R + +
Sbjct: 102 IALGARRAQSARDYLVAQGVNASRIKTIS-YGKERPVAVCNDNSCWSQNRRA-VTVLNNA 159
Query: 187 N 187
Sbjct: 160 T 160
>gi|117617688|ref|YP_858093.1| peptidoglycan-associated lipoprotein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|330828308|ref|YP_004391260.1| peptidoglycan-associated lipoprotein [Aeromonas veronii B565]
gi|117559095|gb|ABK36043.1| peptidoglycan-associated lipoprotein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|328803444|gb|AEB48643.1| Peptidoglycan-associated lipoprotein [Aeromonas veronii B565]
Length = 174
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 68/181 (37%), Gaps = 13/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ + T + + + ++ V + + E++ + + +
Sbjct: 6 LLKGLAIALPLFTLAACSSSSDSDAAGAESGMTDGMGGVQTGGANGMLSPEEQMRQKFEA 65
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
V ++ ++ +L A+ L + PS + I+ H D
Sbjct: 66 ------------LQRDNVIYFPFDGYDIQGQYADLLDAHASYLRERPSVKVLIEGHADER 113
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N+ + + RA + YL +S+ + + P+D + T+ N+R +
Sbjct: 114 GTPEYNIALGERRAKAVAKYLQTL-GVQAEQLSIVSYGEEKPLDMSHTEDAFAKNRRAVL 172
Query: 181 Q 181
Sbjct: 173 V 173
>gi|94968752|ref|YP_590800.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
versatilis Ellin345]
gi|94550802|gb|ABF40726.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
versatilis Ellin345]
Length = 286
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 57/158 (36%), Gaps = 1/158 (0%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
K + ++D + + Q + D V +
Sbjct: 119 TPTEQKVDANKQSIGENKENIDTNKQQIDENQQAVNKRFDDLTDFDVKKEAVVYFVSGKS 178
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
L L +A K +I ++ DS G N +S++RA + ++L+Q
Sbjct: 179 SLAAADKKALTDLAAEATKLTGYIIEVKGFADSTGNAAMNQTLSKDRAFAVVNFLMQDCS 238
Query: 147 SSNRFISVRG-FAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R I G P+ +N+T GR+ N+R+E+++
Sbjct: 239 VPPRHIVSPGAMGISNPVASNETATGRKENRRVEVKVM 276
>gi|323344506|ref|ZP_08084731.1| OmpA family protein [Prevotella oralis ATCC 33269]
gi|323094633|gb|EFZ37209.1| OmpA family protein [Prevotella oralis ATCC 33269]
Length = 688
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 57/152 (37%), Gaps = 36/152 (23%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + L + +LN+ P+ I + +H D G+ + N +SQ+R
Sbjct: 516 VLIDNIFYDFDKATLRPESTKALDELVKLLNENPNVTIELSAHCDYKGSDEYNKRLSQQR 575
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYP---------------------------IDTN 166
A+ + +YLI + + ++ G+ + P +D
Sbjct: 576 ANAVVAYLIDK-GIAKDRLTPVGYGKEKPKTIRKKLTEKYDWMKEGDVLTEAYIKKLDDK 634
Query: 167 DTKVGRQNNQRIEIQIF--------PRGNIKK 190
++ Q N+R E + +GN+K+
Sbjct: 635 KQELCNQLNRRTEFIVLRTTYGLFDEKGNLKQ 666
>gi|149369527|ref|ZP_01889379.1| outer membrane protein, peptidoglycan-associated lipoprotein
[unidentified eubacterium SCB49]
gi|149356954|gb|EDM45509.1| outer membrane protein, peptidoglycan-associated lipoprotein
[unidentified eubacterium SCB49]
Length = 631
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 6/138 (4%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
++ ++ + I D I + ++ + L + T++ K+P+ V
Sbjct: 497 DENVRVTIALKPIEDIIKEDKIVLN--PIYFDYDKHNIKPQAAFELDKVVTLMKKYPTMV 554
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND--- 167
+ +SHTDS T NL +S RA Y+I +GV R IS G PI++
Sbjct: 555 VRAESHTDSRATEAYNLALSNRRAQATVQYIISKGVDEAR-ISGVGKGESTPINSCGDKC 613
Query: 168 TKVGRQNNQRIEIQIFPR 185
T N+R E I +
Sbjct: 614 TDEQHSKNRRSEFTIVEQ 631
>gi|90411166|ref|ZP_01219179.1| putative outer membrane protein [Photobacterium profundum 3TCK]
gi|90328012|gb|EAS44333.1| putative outer membrane protein [Photobacterium profundum 3TCK]
Length = 196
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 75/191 (39%), Gaps = 11/191 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K ++ + T+ GC + + + + D ++ DK D + D
Sbjct: 1 MKRT-VTGLLALTLFGCSVTVEDP-PIAEQSQDQRDFDKDGVINARDKCADTPHSAIVDN 58
Query: 62 ---GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
++R + + + + FL +Q +A L+ +P I ++ +
Sbjct: 59 DGCPTSINREEENDV----RVLFANDSTAIPEAFLSEIQRMADFLDVYPEAYIELKGYAS 114
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+G + N+ +S+ RA ++ LI + + I GF PI ++ ++R+
Sbjct: 115 PVGNSEYNIGLSKRRATKVREQLIAE-GVAPQRIKTIGFGDAEPIAAESSEATNTLSRRV 173
Query: 179 EIQIF-PRGNI 188
++ +G++
Sbjct: 174 VARVIGSKGSL 184
>gi|83954511|ref|ZP_00963222.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
gi|83840795|gb|EAP79966.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
Length = 234
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 70/177 (39%), Gaps = 10/177 (5%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K GL + T++GC + F ++ + ++L+ ++ +
Sbjct: 16 KITGLCAALAMTVAGCVSSPDPVYTQFHREAGSLTDLGTFGNATLNN-----RLVMTGER 70
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + V+F + L+ +L+ A + +FP + HTD++G
Sbjct: 71 QYTFDLANRFAGEVESTVTFAFNSAQLDGAAQAVLRRQAGWIRQFPEVRFRVYGHTDAVG 130
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-NQR 177
+ N + RA + +L +G+S +R +V F P+ GR+ N+R
Sbjct: 131 SNSYNKALGLRRAQSVVGFLSTQGISRSRLEAVVSFGETQPLIVT---QGRERANRR 184
>gi|291447367|ref|ZP_06586757.1| secreted protein [Streptomyces roseosporus NRRL 15998]
gi|291350314|gb|EFE77218.1| secreted protein [Streptomyces roseosporus NRRL 15998]
Length = 215
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 73/195 (37%), Gaps = 17/195 (8%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED------------EFQ 55
+ TT+ G L+ + + T + + +
Sbjct: 21 VLIAGTTLLGAPLSYADDGPSVPPGTEATSEPPVPVDPNDPDLKMPEGGTLAPGRVLDIV 80
Query: 56 MQLQDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
++D G R + L + IA + K +T I
Sbjct: 81 QVVEDLGGEERREDSNADIKFALQAEVLFGKDSAKLSSAANARIAAIAEEIKKQNATKIR 140
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+ TD++G+ + ++S++RAD + L ++ + +RG+ +YPI +N + GR
Sbjct: 141 VFGFTDNLGSSAHGDVLSKQRADAVHGVLSKQLGPTV-TYEIRGYGEQYPIASNSNEEGR 199
Query: 173 QNNQRIEIQIFPRGN 187
+ N+R+E+ FPRG
Sbjct: 200 KKNRRVEVS-FPRGE 213
>gi|86132613|ref|ZP_01051206.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85816855|gb|EAQ38040.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 650
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 7/146 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
++ E + +++L+ T + V + + ++ + L + + +
Sbjct: 507 ATEQSLERDIELELRLTEVGVGDDLAKL-LNLNPIYFDYNKSDIRPDAALELTKVISAMK 565
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI- 163
+ P VI ++SHTDS G NL +S RA +Y+I R + IS G+ +
Sbjct: 566 QVPEMVINVRSHTDSRGKDSYNLSLSDRRAKSTVAYIISR-GINAERISGNGYGETQLVN 624
Query: 164 ----DTNDTKVGRQNNQRIEIQIFPR 185
+++ T+ Q N+R E + +
Sbjct: 625 GCGNNSDCTEEQHQLNRRSEFIVVNQ 650
>gi|319760471|ref|YP_004124409.1| peptidoglycan-associated lipoprotein [Candidatus Blochmannia vafer
str. BVAF]
gi|318039185|gb|ADV33735.1| peptidoglycan-associated lipoprotein [Candidatus Blochmannia vafer
str. BVAF]
Length = 175
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 17/176 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
I LG+S+ IM + C S++ +K + + + +++ + LQ
Sbjct: 12 IYRLGISI-IMFLYTSCTHISKDYEKHVDNIDYLNKLDTNSIDNIINQPNKLNRQHLQSK 70
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
I + + + F +L + A L K P I I+ HTD G
Sbjct: 71 NI---------------IYFPLDQYNIPSVFFDILDVHAIFLRKNPLHHIIIEGHTDERG 115
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
T + N+ + + RA IK YL + + IS + + P+ T+ N+R
Sbjct: 116 TPEYNIGLGERRAYSIKKYLQSK-GVLSNQISTISYGKEKPVSFGHTEESYSQNRR 170
>gi|90409178|ref|ZP_01217293.1| outer membrane protein OmpA [Psychromonas sp. CNPT3]
gi|90309723|gb|EAS37893.1| outer membrane protein OmpA [Psychromonas sp. CNPT3]
Length = 326
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ P+L I L KFP I+I +HTDS G+ N ++ +RA +
Sbjct: 223 FFDFDSSEILPT--PLLHQITDQLAKFPKINISIIAHTDSEGSDLYNDKLAAKRALEVSK 280
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
Y + + ++ NR I+V + P N+TK GR N+R+EI
Sbjct: 281 YFLHKNINKNR-INVLSHGERLPTHDNETKKGRAKNRRVEIT 321
>gi|165975761|ref|YP_001651354.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|190149578|ref|YP_001968103.1| outer membrane protein precursor PalA [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303249536|ref|ZP_07335743.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303252546|ref|ZP_07338709.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307245117|ref|ZP_07527210.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307247296|ref|ZP_07529344.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251837|ref|ZP_07533738.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307254073|ref|ZP_07535920.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307256332|ref|ZP_07538115.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307258528|ref|ZP_07540265.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307260771|ref|ZP_07542458.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307262897|ref|ZP_07544521.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|322514835|ref|ZP_08067854.1| peptidoglycan-associated lipoprotein [Actinobacillus ureae ATCC
25976]
gi|1405436|emb|CAA61413.1| PALA outer membrane protein precursor [Actinobacillus
pleuropneumoniae]
gi|165875862|gb|ABY68910.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|189914709|gb|ACE60961.1| outer membrane protein precursor PalA [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302648514|gb|EFL78707.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302651610|gb|EFL81759.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306854006|gb|EFM86218.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306856140|gb|EFM88295.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306860529|gb|EFM92541.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306862998|gb|EFM94945.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865158|gb|EFM97058.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306867432|gb|EFM99283.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306869497|gb|EFN01287.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306871802|gb|EFN03522.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|322119217|gb|EFX91358.1| peptidoglycan-associated lipoprotein [Actinobacillus ureae ATCC
25976]
Length = 152
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 53/179 (29%), Gaps = 34/179 (18%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K ++ + ++ C +S + +
Sbjct: 1 MKKLAKVLMIAAPAFVLAACSSSSDNANANANANAGQFGGMTA----------------- 43
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + +E ++ +L A L + + H D
Sbjct: 44 -----------EDLQTRYNTVYFGFDSYAVEGEYQQLLDAHAAYLTSANG-KVTVAGHAD 91
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RAD +K+YL +G +S + + P T+ N+R
Sbjct: 92 ERGTPEYNIALGQRRADAVKNYLATKG---ANQVSTVSYGEEKPAVLGHTEADYAKNRR 147
>gi|327539245|gb|EGF25868.1| OmpA/MotB domain protein [Rhodopirellula baltica WH47]
Length = 282
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 16/182 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSL----------DKAEDEFQMQLQDTGIVVSRIG 69
+ ++ + + D + F +S + ++ +L G+ V + G
Sbjct: 99 SDTTQQYESARIAAQDAQTQARSFQASAQMRGGATIRANTNLNQMAGRLNLGGLKVEQDG 158
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTDSIGTLK--- 124
+++ +P F L+ +L A L FP I I+ +TD+
Sbjct: 159 EVLRVVLPSDQLFAQGTGQLQPSAGAILDPTAAQLRSVFPRQRIGIEGYTDNAPMYGGAA 218
Query: 125 -NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ ++ + + +L +R + + P N T GR N+RIE+ I+
Sbjct: 219 GSAHQLTSAQTGAVLDWLTRRSGMPEQQLFTVAQGSNNPRQDNTTPAGRAANRRIELVIY 278
Query: 184 PR 185
P
Sbjct: 279 PE 280
>gi|208780408|ref|ZP_03247749.1| OmpA family protein [Francisella novicida FTG]
gi|208743776|gb|EDZ90079.1| OmpA family protein [Francisella novicida FTG]
Length = 408
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 68/187 (36%), Gaps = 22/187 (11%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
++TT+S C + K +L+ E Q V +
Sbjct: 1 MASLLTTLSACQTLDDKDKD-----------SGPLTFPTLEPCTAELLQSNQSFICVKEQ 49
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH---------TD 118
G + L + +L + L +T I+ + TD
Sbjct: 50 TGPDLIET--NIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTD 107
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
N+ +S+ RA ++ YL+ +G+ S+ I+++ Y+ PI ND+ R NQR+
Sbjct: 108 QKILTDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRV 167
Query: 179 EIQIFPR 185
EI + R
Sbjct: 168 EITLKSR 174
>gi|261855180|ref|YP_003262463.1| peptidoglycan-associated lipoprotein [Halothiobacillus neapolitanus
c2]
gi|261835649|gb|ACX95416.1| peptidoglycan-associated lipoprotein [Halothiobacillus neapolitanus
c2]
Length = 127
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ ++ + PMLQ A L + + ++ +TD+ G+ + N+ + ++RA ++
Sbjct: 23 VYFGFDKYNVDPSYRPMLQQNAAFLKENTQRHVLVEGNTDNRGSREYNIALGEKRAVAVR 82
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
L+ + + V + + P + + N+R ++
Sbjct: 83 DTLLA-DGVAPSQVDVVSYGEERPAVEGNNEAAWAKNRRADL 123
>gi|224825740|ref|ZP_03698844.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
gi|224601964|gb|EEG08143.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
Length = 271
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 66/149 (44%), Gaps = 7/149 (4%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQ 97
R GS + + ++ + +++ +T I F ++ + L +L
Sbjct: 98 EQARLGSLASDLQKVMEPLVKGGQVKITQSPKGVTIEIRDSALFPIAQAQPAPQSLQVLA 157
Query: 98 LIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+A +L++ I ++ TD+I +N +S RA + ++ G++ R ++
Sbjct: 158 QMAKVLSQV-DNPITVEGFTDNIPIRNTFYPSNWELSAARAGSVVRLFVENGIAPARLVA 216
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V G A P+ N ++ GR +N+R+ I +
Sbjct: 217 V-GRAENLPVADNTSEEGRASNRRVSITV 244
>gi|218658643|ref|ZP_03514573.1| putative outer membrane porin involved in nitrogen fixation
[Rhizobium etli IE4771]
Length = 262
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 8/144 (5%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATIL 103
S LD Q +++ + +S + I F + +KF +LQ I L
Sbjct: 88 SRLDNLLAFLQPEVEKKLVTLSDSNGRLLVRISNSGLFATGSAEVSEKFHDLLQRIGGAL 147
Query: 104 NKFPSTVIAIQSHTDSIGTLKNN----LLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ + +TD++ +S+ RA + L I G A
Sbjct: 148 AAEKFRAVVV-GYTDNVPIRTIQFPSNWHLSEARAKAVGEILASFTGPGA--ILTEGRAD 204
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF 183
PI NDT+ GR+ N+R EI +
Sbjct: 205 SDPIAGNDTQEGREMNRRTEILVL 228
>gi|296410010|gb|ADH15781.1| OmpP6 [Haemophilus haemolyticus]
Length = 149
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 61/174 (35%), Gaps = 31/174 (17%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + ++ C ++ + + G S+ +
Sbjct: 3 KSLLVAGSVAALAACSSSNND--------AAGNGAGQTFGGYSVSDLQQ----------- 43
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ +E +++ +L A LN P+ + ++ +TD GT
Sbjct: 44 -----------RYNTVYFGFDKYNIEGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTP 92
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N+ + Q RAD +K YL +GV + + +V + + P + N+R
Sbjct: 93 EYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 145
>gi|229121280|ref|ZP_04250511.1| OmpA/MotB domain protein [Bacillus cereus 95/8201]
gi|228662125|gb|EEL17734.1| OmpA/MotB domain protein [Bacillus cereus 95/8201]
Length = 224
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 54/136 (39%), Gaps = 9/136 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D+ + + + + GI V R + + + + ++ + ++ +
Sbjct: 83 MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGF 142
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS + N +S RA + +LI+ ++ ++ G+A
Sbjct: 143 FQSVPN-PIVVEGHTDSRPIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 201
Query: 159 YKYPIDTNDTKVGRQN 174
P+ ND+ +
Sbjct: 202 DTKPVVPNDSPQNWEK 217
>gi|39933998|ref|NP_946274.1| hypothetical protein RPA0921 [Rhodopseudomonas palustris CGA009]
gi|192289418|ref|YP_001990023.1| hypothetical protein Rpal_0991 [Rhodopseudomonas palustris TIE-1]
gi|39647845|emb|CAE26365.1| possible flagellar motor protein MotB [Rhodopseudomonas palustris
CGA009]
gi|192283167|gb|ACE99547.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
Length = 341
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 12/139 (8%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-------T 109
+ + +GD + L + L +A L +
Sbjct: 205 AILGDRPDIRIVGDRFVFQ-SEVFFDTGQALLLPEGRAELDKVADALKELDKKIPAELPW 263
Query: 110 VIAIQSHTDSI---GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
V+ + HTD G+ K+N +S RA + YL+ RGV + R ++ GFA P+DT
Sbjct: 264 VVRVDGHTDKRPITGSFKSNWELSSARAISVVQYLMSRGVPAQRLVAA-GFAEFQPLDTA 322
Query: 167 DTKVGRQNNQRIEIQIFPR 185
DT + N+RIE+++ R
Sbjct: 323 DTDDAYKRNRRIELKLTER 341
>gi|255037115|ref|YP_003087736.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254949871|gb|ACT94571.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 484
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L+ +F +L+ +A ++NK + + HTD + + N+ +S+ R +
Sbjct: 376 FANVTFDTDKNVLKPEFQELLKNVAALMNKN-GCRLQLAGHTDRRASDRYNIALSKRRVE 434
Query: 136 VIKSYLIQRGVSSN-RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+K++LI + + V F PI + T+ G Q N+R+E+++ P
Sbjct: 435 AVKNFLINEAGLQDPSKVIVDYFGSFKPIADSATRPGLQKNRRVELKLLP 484
>gi|157736296|ref|YP_001488979.1| hypothetical protein Abu_0025 [Arcobacter butzleri RM4018]
gi|157698150|gb|ABV66310.1| hypothetical protein, OmpA domain [Arcobacter butzleri RM4018]
Length = 316
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
++ ++ IA ILN+ P+ + + HTDS G N ISQ+
Sbjct: 206 ILKDRKISFERKSSIPTEQSQNTIKEIAKILNENPNFKVEVAGHTDSRGEAALNKQISQD 265
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ +K+ ++ + I G+ ++PI +D + N+R+E I
Sbjct: 266 RANSVKN-ILVNSGVNETRIKAIGYGEEFPIAKDDENGLSEINRRVEFII 314
>gi|148559624|ref|YP_001259565.1| hypothetical protein BOV_1656 [Brucella ovis ATCC 25840]
gi|148370881|gb|ABQ60860.1| OmpA/MotB domain [Brucella ovis ATCC 25840]
Length = 314
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---T 109
++ + +GD + + K ++ +A + + P
Sbjct: 176 EILSDKENIRIVGDRFVFQ-SEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIPDDINW 234
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI GV +NR ++ GF P+D
Sbjct: 235 VLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGEYQPLD 293
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
T +T R N+RIE+++ R
Sbjct: 294 TANTADARARNRRIELKLTER 314
>gi|309780841|ref|ZP_07675582.1| peptidoglycan-associated outer-membrane lipoprotein [Ralstonia sp.
5_7_47FAA]
gi|308920523|gb|EFP66179.1| peptidoglycan-associated outer-membrane lipoprotein [Ralstonia sp.
5_7_47FAA]
Length = 167
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 39/116 (33%), Gaps = 1/116 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
++ ++ +L + L + IQ +TD GT +
Sbjct: 52 ELTDPNSPLAKRSIYFDFDSYSVKPEYQGLLGQHSRYLQSHNQRKVLIQGNTDERGTSEY 111
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL + Q+RA+ ++ + + + + P T + N+R +I
Sbjct: 112 NLALGQKRAEAVRR-ALSSMGVPDSQMEAVSLGKEKPQATGHDEDSWAQNRRADIV 166
>gi|307332443|ref|ZP_07611507.1| OmpA/MotB domain protein [Streptomyces violaceusniger Tu 4113]
gi|306881912|gb|EFN13034.1| OmpA/MotB domain protein [Streptomyces violaceusniger Tu 4113]
Length = 211
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ D + + V F L + ++ IA+ + + + +
Sbjct: 82 ETDDGDERREDTNAKVKFALQAEVLFGKDSAKLGGEAKARIKEIASEAERQNAKSVRVFG 141
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
TD +G+ + +++S++RA+ ++ L + S + +RG+ +YPI N ++ GR+ N
Sbjct: 142 FTDDLGSAGHGIVLSKQRANAVQQALAEDLEPSVNY-EIRGYGEQYPIADNASEEGRKRN 200
Query: 176 QRIEI 180
+R+E+
Sbjct: 201 RRVEV 205
>gi|297748730|gb|ADI51276.1| Peptidoglycan-associated lipoprotein [Chlamydia trachomatis D-EC]
gi|297749610|gb|ADI52288.1| Peptidoglycan-associated lipoprotein [Chlamydia trachomatis D-LC]
Length = 202
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 14/167 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC A K + + + F D E++ +
Sbjct: 46 GCDSARPRKSSFGFVPFYSDEEIQQAFVEDFDSKEEQLYKTSAQST------------SF 93
Query: 77 PVHVSFVSEVFLE-KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
++ + L +L + L+K P + I+ HTD G NL + RA+
Sbjct: 94 RNITFATDSYSIKGEDNLTILASLVRHLHKSPKATLYIEGHTDERGAAAYNLALGARRAN 153
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+K YLI++G++++R ++ + ++P+ ++ Q N+R E +I
Sbjct: 154 AVKQYLIKQGIAADRLFTIS-YGKEHPVHPGHNELAWQQNRRTEFKI 199
>gi|15605330|ref|NP_220116.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
D/UW-3/CX]
gi|76789338|ref|YP_328424.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
A/HAR-13]
gi|166154814|ref|YP_001654932.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 434/Bu]
gi|166155689|ref|YP_001653944.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237803028|ref|YP_002888222.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
B/Jali20/OT]
gi|237804949|ref|YP_002889103.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
B/TZ1A828/OT]
gi|255311421|ref|ZP_05353991.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 6276]
gi|255317722|ref|ZP_05358968.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 6276s]
gi|255348981|ref|ZP_05380988.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 70]
gi|255503520|ref|ZP_05381910.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 70s]
gi|255507198|ref|ZP_05382837.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
D(s)2923]
gi|301336092|ref|ZP_07224336.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis L2tet1]
gi|3329044|gb|AAC68202.1| Peptidoglycan-Associated Lipoprotein [Chlamydia trachomatis
D/UW-3/CX]
gi|76167868|gb|AAX50876.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
A/HAR-13]
gi|165930802|emb|CAP04300.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 434/Bu]
gi|165931677|emb|CAP07254.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231273249|emb|CAX10164.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231274262|emb|CAX11057.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
B/Jali20/OT]
gi|289525642|emb|CBJ15123.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
Sweden2]
gi|296435206|gb|ADH17384.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis E/150]
gi|296436135|gb|ADH18309.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis G/9768]
gi|296437063|gb|ADH19233.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
G/11222]
gi|296437995|gb|ADH20156.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
G/11074]
gi|296438925|gb|ADH21078.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
E/11023]
gi|297140497|gb|ADH97255.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis G/9301]
Length = 188
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 14/167 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC A K + + + F D E++ +
Sbjct: 32 GCDSARPRKSSFGFVPFYSDEEIQQAFVEDFDSKEEQLYKTSAQST------------SF 79
Query: 77 PVHVSFVSEVFLE-KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
++ + L +L + L+K P + I+ HTD G NL + RA+
Sbjct: 80 RNITFATDSYSIKGEDNLTILASLVRHLHKSPKATLYIEGHTDERGAAAYNLALGARRAN 139
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+K YLI++G++++R ++ + ++P+ ++ Q N+R E +I
Sbjct: 140 AVKQYLIKQGIAADRLFTIS-YGKEHPVHPGHNELAWQQNRRTEFKI 185
>gi|332290760|ref|YP_004429369.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332168846|gb|AEE18101.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 648
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + + L + + +PS I ++SHTDS G NL +SQ
Sbjct: 532 ILDLNPIYFNFDKYDIRPDAEVELAKVLVYMETYPSVRIDVRSHTDSRGRDAYNLNLSQN 591
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
R + +LI +G+S++R ++ +G+ ++ +K Q N+R E +
Sbjct: 592 RNVSTRDWLISKGISASR-LTGKGYGETQLVNDCGNGVRCSKDQHQLNRRSEFIVLSN 648
>gi|296410002|gb|ADH15777.1| OmpP6 [Haemophilus haemolyticus]
Length = 144
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 61/174 (35%), Gaps = 31/174 (17%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + ++ C ++ + + G S+ +
Sbjct: 1 KSLLVAGSVAALAACSSSNND--------AAGNGAGQTFGGYSVSDLQQ----------- 41
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ +E +++ +L A LN P+ + ++ +TD GT
Sbjct: 42 -----------RYNTVYFGFDKYNIEGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTP 90
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N+ + Q RAD +K YL +GV + + +V + + P + N+R
Sbjct: 91 EYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 143
>gi|294624487|ref|ZP_06703170.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292601217|gb|EFF45271.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 400
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Query: 73 TCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + F + + +L + L K + + ++ HTD+ G+ N +S+
Sbjct: 285 LITLNDRILFDFDKSDIRADAARVLDTLGAALTKVTAKDMQVRGHTDAKGSDDYNQALSE 344
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQI 182
RA+ + + L RG + + +G P+ N D GRQ N+R+EI +
Sbjct: 345 RRANAVLAALRARGAAQSAN--AKGDGESQPVAPNTVNRQDNPGGRQLNRRVEIFL 398
>gi|146276360|ref|YP_001166519.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145554601|gb|ABP69214.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 212
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
P L + +L+ A + +FP + HTD +G+ N + RA
Sbjct: 64 PTITFPFDSARLTPEAQRVLREQANWIRQFPEVRFRVYGHTDLVGSASYNKSLGLRRAKA 123
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ ++ +G+S +R ++ + P+ T R N+R
Sbjct: 124 VVAFFASQGISPSRLEALVSYGETRPVIPVATPEER--NRR 162
>gi|269955512|ref|YP_003325301.1| OmpA/MotB domain-containing protein [Xylanimonas cellulosilytica
DSM 15894]
gi|269304193|gb|ACZ29743.1| OmpA/MotB domain protein [Xylanimonas cellulosilytica DSM 15894]
Length = 217
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 66/166 (39%), Gaps = 13/166 (7%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR----IGDMITCYIPVHV 80
+ L D+ + +L + F ++ D+ I V D + +
Sbjct: 52 EITDALRADATFDLAPEDATFALATEDATFTLRPDDSTITVETRQETEDDTVVTLTSDLL 111
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
E L + + +AT + + + + HTD++G+ + NL +S++RAD + +
Sbjct: 112 FGFGESALTPEAQAAVAELATTIPQ--DAAVRVDGHTDAVGSDELNLTLSEQRADAVAAV 169
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQ 181
L ++V G P+ +N D GR N+R+E+
Sbjct: 170 LSGARPDL--VLTVEGHGEADPVASNEEGGVDNPAGRALNRRVEVT 213
>gi|170695384|ref|ZP_02886530.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170139784|gb|EDT07966.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 248
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 1/113 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
L L + + +TD G+ +NL +S+
Sbjct: 137 LLLQGNANFATDSATLSPIAKENLDHFMAANKGANLRRVTVTGYTDKTGSEAHNLALSKA 196
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA+ + YL +G P+ +N T GR N+R+++++
Sbjct: 197 RAEAVVQYLRDG-GLEGEQFVAQGLGSADPVASNATAEGRSQNRRVDVRVVAE 248
>gi|114563544|ref|YP_751057.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114334837|gb|ABI72219.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 429
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 53/170 (31%), Gaps = 7/170 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
+ ++ + D + + Q ++ + V ++ D + I
Sbjct: 261 SSEAYKELTSIVPWEKTIDAQQQISRDEALLLQQLLQTEIGKNLLEVEQLSDRVRIRIGA 320
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQER 133
+ F +L IA L I I HTD +N +S R
Sbjct: 321 TELFASGNTQPRSDFEAILAKIALTLEST-DGKILITGHTDDEPIFTSKYPSNWHLSLAR 379
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A I + L S R G P ND + R N+RIEI +
Sbjct: 380 ATSIANVLANSASLSGRLW-PEGRGESEPRVVNDNEQNRALNRRIEIDLL 428
>gi|269302570|gb|ACZ32670.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
LPCoLN]
Length = 192
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 73 TCYIPVHVSFVSEVFLE-KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
++ ++ L +L + + K P + I+ HTD G NL +
Sbjct: 80 VAAFRNITFATDSYTIKGEENLAILTNLVHYMKKNPKATLYIEGHTDERGAASYNLALGA 139
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ IK +L ++G+S++R ++ + ++P+++ ++ Q N+R E +I
Sbjct: 140 RRANAIKEHLRKQGISADRLPTIS-YGKEHPLNSGHNELAWQQNRRTEFKI 189
>gi|262394300|ref|YP_003286154.1| outer membrane protein [Vibrio sp. Ex25]
gi|262337894|gb|ACY51689.1| outer membrane protein [Vibrio sp. Ex25]
Length = 272
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 55/152 (36%), Gaps = 12/152 (7%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + L T + + + + V + K++
Sbjct: 106 LNQLEQQLDYVLSQTTCTPPDDIEALRSDLNVVAEIYALLNIDNQFAVDSAEINPKYMGH 165
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L A IL P+ + + H D G N ++Q RA+ +K + ++ ++ +
Sbjct: 166 LAEAAYILRDHPNLTLVVTGHADVTGAPDYNQKLAQARAEQVKR-YLTVFGITSERVTTK 224
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
P+ +T R N+R+ I++ +
Sbjct: 225 SVGDSLPLYEGETPAVRLTNRRVSIEVISPNS 256
>gi|260591055|ref|ZP_05856513.1| OmpA family protein [Prevotella veroralis F0319]
gi|260536920|gb|EEX19537.1| OmpA family protein [Prevotella veroralis F0319]
Length = 695
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 36/157 (22%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
G + I + L + L + +LN+ P+ I + +HTD IG+ N
Sbjct: 521 GINVPVLIDNIFYDFDKATLRPESEKALDDLVKLLNENPNVTIELSAHTDCIGSADYNKR 580
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP-------------IDTND--TKV--- 170
+SQ RAD + + + + ++ G+ + P + ND T+
Sbjct: 581 LSQRRADAVVA-YLTAHGIAQDRLTPVGYGKERPKKIRKKLTEKYNWLKENDVLTEDFIK 639
Query: 171 ---------GRQNNQRIEIQIF--------PRGNIKK 190
Q N+R E + +GN+K+
Sbjct: 640 KLPKDKQEVCNQLNRRTEFIVLRTTYGMFDEKGNLKQ 676
>gi|289641193|ref|ZP_06473360.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata]
gi|289508955|gb|EFD29887.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata]
Length = 226
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 14/188 (7%)
Query: 6 GLSMFIMTTISG--CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + +T + C +R TD ++ A + ++ + +
Sbjct: 37 AVVLASVTAVVSWLCVPTARAATDAPTTAPTVTDQAIIESIREINPAAAIRPIDVERSVV 96
Query: 64 VVS---RIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ R G + I V F L K L IA L + T I + +TDS
Sbjct: 97 TLRTERRDGSGVVVTISSDVLFAFDSANLTKAAREQLDGIAAQLGRVTGT-ITVNGYTDS 155
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQ 173
GT N+++SQ+RA+ + + L + +S G P+ N D GR
Sbjct: 156 TGTPAYNVILSQQRANAVANLLRPKAPPGV-LVSATGHGAANPVAPNTNSDGSDNSAGRG 214
Query: 174 NNQRIEIQ 181
N+R+ I
Sbjct: 215 QNRRVSII 222
>gi|268316337|ref|YP_003290056.1| OmpA/MotB domain-containing protein [Rhodothermus marinus DSM 4252]
gi|262333871|gb|ACY47668.1| OmpA/MotB domain protein [Rhodothermus marinus DSM 4252]
Length = 253
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 74/205 (36%), Gaps = 28/205 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH-----------KSNDTDIVNKRFGSSL--- 47
+ L L+ F+M +K K L ++ I N+ L
Sbjct: 28 MATLLLTFFVMIV--AMSEVEVKKFKEALSFFQGRTGMLQSEAVIPSIKNQVVQRRLSKE 85
Query: 48 -----DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIAT 101
++ Q + + V+ + I + F E + + +L+++A
Sbjct: 86 QLEKYEELIQYLQEHNLEGKVQVNLTDKGLHLIITDSIMFRSGEAEIIEPSRTILRILAG 145
Query: 102 ILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGV-SSNRFISVRG 156
I+ + ++ HTD+ +N +S RA + +L+++ G
Sbjct: 146 II-DDRIESVVVEGHTDNRPIHTARFPSNWELSAARAAAVVRFLLEQTDALPPSRYMAVG 204
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +P DTN T GR N+R+EI
Sbjct: 205 YGEFHPRDTNATPEGRARNRRVEIL 229
>gi|254415575|ref|ZP_05029335.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420]
gi|196177756|gb|EDX72760.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420]
Length = 727
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 66/175 (37%), Gaps = 9/175 (5%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR------ 67
TIS + T ++ + L T S
Sbjct: 533 TISAIATHPENGTSEPALNAVVTSSDGT-IPANPEPQPPVIPQCLTQTPPPSSPPEPTPP 591
Query: 68 IGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ +T +P +V F + + +L +A +L ++P I +Q HTD + N
Sbjct: 592 VQQPLTLRVPRNVHFALDRADISPESAAVLDQVAAVLQEYPFLTIELQGHTDPRASAAYN 651
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+++ RA +++YL+++GV R ++R F T V ++R+EI
Sbjct: 652 QALARRRALAVRNYLLRQGVDPGRM-TIRSFGESQRRTTGSGVVDYARDRRVEII 705
>gi|183220368|ref|YP_001838364.1| hypothetical protein LEPBI_I0964 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910483|ref|YP_001962038.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167775159|gb|ABZ93460.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167778790|gb|ABZ97088.1| Hypothetical protein; putative signal peptide [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 229
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 66/224 (29%), Gaps = 44/224 (19%)
Query: 1 MIKELGLSMFIMTT--------------------ISGCGLASREKKKVFLHKSNDTDIVN 40
M + L + + GC K L +
Sbjct: 1 MFRNLLIILIASLFGFQCQTTTNPEWMESESFQKFCGCVHIDETKPSEHLGSLPVGSLDK 60
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT---------------------CYIPVH 79
L+K + + TG +G +
Sbjct: 61 LGTPDYLEKLYKGLRSDFEHTGTPFEEVGGSLVAKGVELKRIEDDEKRLRELLIIIDGDV 120
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L K ++ + + +P T I HTDS+G NL +S+ER+ +K
Sbjct: 121 AFPSGKSTLTPKAKELIAKVGDAMEAYPETNCRIGGHTDSVGAFSMNLKLSKERSQSVKR 180
Query: 140 YLIQRGVS-SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L RF V G+A + I DT + + N+R EI +
Sbjct: 181 ELKLVHKIAEERFKEVDGYADQQKIV--DTMLAEKKNRRTEIYV 222
>gi|254230012|ref|ZP_04923412.1| outer membrane protein [Vibrio sp. Ex25]
gi|151937453|gb|EDN56311.1| outer membrane protein [Vibrio sp. Ex25]
Length = 288
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 54/149 (36%), Gaps = 12/149 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + L T + + + + V + K++
Sbjct: 122 LNQLEQQLDYVLSQTTCTPPDDIEALRSDLNVVAEIYALLNIDNQFAVDSAEINPKYMGH 181
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L A IL P+ + + H D G N ++Q RA+ +K + ++ ++ +
Sbjct: 182 LAEAAYILRDHPNLTLVVTGHADVTGAPDYNQKLAQARAEQVKR-YLTVFGITSERVTTK 240
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ +T R N+R+ I++
Sbjct: 241 SVGDSLPLYEGETPAVRLTNRRVSIEVIS 269
>gi|115360144|ref|YP_777282.1| hypothetical protein Bamb_5401 [Burkholderia ambifaria AMMD]
gi|115285432|gb|ABI90948.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 214
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 53/158 (33%), Gaps = 13/158 (8%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ E L + + I+ + ++ L+ +L+
Sbjct: 53 ARQQEAQQRKSLEQALAGPLAAGRVTLVNGRIGIS---GAVLFALNSDQLQPDGRDLLKT 109
Query: 99 IATILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSN 149
+A L + ++ I D +N +S +RA + LI
Sbjct: 110 LAGPLAAYLTTRDEILMISGFADDQQVRAGNRQFADNWELSAKRALTVTRALIDA-GVPA 168
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
R + F + P+ +N GR N+R+EI PR +
Sbjct: 169 RSVFAAAFGSEQPVSSNADDEGRAKNRRVEIAPVPRKS 206
>gi|284039792|ref|YP_003389722.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283819085|gb|ADB40923.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 813
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I + L + L + + K+PS +I I+SHTDS G + N +S +
Sbjct: 696 VVTIDNIYYDLDHSSLREDAARELDKVVATMRKYPSLIIEIRSHTDSRGDAERNKALSLQ 755
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
RA + +YL + S + ++ G ++ T+ Q N+R E ++
Sbjct: 756 RAKAVAAYLASK-GISRKRMATLGMGESQLVNNCTDGVICTEAEHQRNRRTEFRVV 810
>gi|221197269|ref|ZP_03570316.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
gi|221203942|ref|ZP_03576960.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221176108|gb|EEE08537.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221183823|gb|EEE16223.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
Length = 214
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 56/158 (35%), Gaps = 13/158 (8%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ E L + + I + + ++ L+ +L+
Sbjct: 53 ARQQEAQQRKTLEQALAGPLAAGRVTLVNGRIGIAGNL---LFALNSDQLQPDGRELLKT 109
Query: 99 IATILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSN 149
+A L + ++ + D +N +S +RA + LI GV ++
Sbjct: 110 LAGPLAAYLKTRDQILMVSGFADDQQVRAGNRMFADNWELSAKRALTVTRALIDEGVPAS 169
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ F + P+ +N GR N+R+EI PR +
Sbjct: 170 SVFAAA-FGSEQPVSSNADDEGRAKNRRVEIAPVPRKS 206
>gi|148554155|ref|YP_001261737.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
gi|148499345|gb|ABQ67599.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
Length = 196
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 59/196 (30%), Gaps = 16/196 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ + + + ++GC V + G ++ E +
Sbjct: 1 MNRVLPLLAVAGLLAGCATTPTLTLLPTEEGKQGAVAVLEENGKPMETVVSELNSSTNLS 60
Query: 62 GIVVSRIGDMITCYIPVH---------------VSFVSEVFLEKKFLPMLQLIATILNKF 106
G +R D L + P L + +++
Sbjct: 61 GTPRTRSIDPAKMSARQRELLQALPPAPVRLTLYFLEGTTELTPESQPGLAFLIKEVSER 120
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
P + + +TD++G N +SQ+RA+ + ++ + +S G +
Sbjct: 121 PGAEVQVTGYTDTLGEADANDRLSQQRAEEVL-GVLAKQGIDPTLMSAVGRGERNLRVAT 179
Query: 167 DTKVGRQNNQRIEIQI 182
V N+R+ + I
Sbjct: 180 PDGVSEPANRRVVVTI 195
>gi|323697841|ref|ZP_08109753.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323457773|gb|EGB13638.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 254
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 46/127 (36%), Gaps = 6/127 (4%)
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G V+ D + F L +L + +L + + ++ HTD
Sbjct: 121 EGAGVNADRDGVVFRTSSAALFQPFTAELRPDATQILDGVIKVLKDYK-LNLVVRGHTDD 179
Query: 120 IGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+N +S RA V Y++ +G G+A P NDT+ R N
Sbjct: 180 RPIHTAKYPSNWELSAARAAVALDYIVNKGGIEINRAKAVGYADTRPEVPNDTEADRLRN 239
Query: 176 QRIEIQI 182
QR+E I
Sbjct: 240 QRVEFYI 246
>gi|323436227|ref|ZP_01051616.2| OmpA family protein [Dokdonia donghaensis MED134]
gi|321496542|gb|EAQ37623.2| OmpA family protein [Dokdonia donghaensis MED134]
Length = 256
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T + + + L+ + ++ ++PS I ++SHTDS N+ +SQ
Sbjct: 139 TLELNPIYFDFDKHNIRPDAALELEKVIAVMREYPSLKIDVRSHTDSRAPDAYNMSLSQR 198
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
R Y++ +G S ++ RG+ + T+ Q N+R E I +
Sbjct: 199 RNVSTIRYIVDQGGISMSRLTGRGYGETQLTNACGNGIECTEEEHQLNRRSEFIIVAK 256
>gi|296108643|ref|YP_003620344.1| hypothetical protein lpa_04343 [Legionella pneumophila 2300/99
Alcoy]
gi|295650545|gb|ADG26392.1| Hypothetical protein lpa_04343 [Legionella pneumophila 2300/99
Alcoy]
Length = 294
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 2/113 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
V V L L+ IA ++ VI + H D G N ISQ
Sbjct: 183 VKESVFHFGVDSKLLSDADKAQLRRIAQYVDADVQIDVIKVIGHADDSGRKGYNNAISQY 242
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA+ +K+YLI R R +S+ PI NDT GR N+R+ + + +
Sbjct: 243 RAESVKNYLI-RLGVPQRKLSITWVGALQPIARNDTDEGRAANRRVVVTLIKK 294
>gi|262402315|ref|ZP_06078876.1| outer membrane protein [Vibrio sp. RC586]
gi|262351097|gb|EEZ00230.1| outer membrane protein [Vibrio sp. RC586]
Length = 212
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 7/135 (5%)
Query: 62 GIVVSRIGDMITCYIPV-----HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G + G + +E FL ++ +A L +PST I +Q +
Sbjct: 69 GSEIDNDGCGTFVKSSQMQQLHILFANDSSAIEPAFLTQIRQMAEFLKTYPSTSIELQGY 128
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+G ++NL +S++R++ ++ L+ R + +++ G+ V N+
Sbjct: 129 ASKVGGAEHNLALSKQRSEAVRDQLL-RYGITPNRVNIVGYGDSVLEADGTDDVSHARNR 187
Query: 177 RIEIQIFP-RGNIKK 190
R+ + +G + K
Sbjct: 188 RVTATVVGYKGEVVK 202
>gi|77465487|ref|YP_354990.1| OmpA family outer membrane protein [Rhodobacter sphaeroides 2.4.1]
gi|77389905|gb|ABA81089.1| Possible outer membrane protein, OmpA family [Rhodobacter
sphaeroides 2.4.1]
Length = 453
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTV--IAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + + P++ +A +L + V + + HTD++ ++N S +
Sbjct: 341 LFRSARAEVNADYAPLVASVAAVLAENRELVGAVRVIGHTDNVPVQRSNPFASNQGLSEA 400
Query: 138 KSYLIQRG----VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ + ++ G A P+ N T+ GR N+R+EI+I R
Sbjct: 401 RAATLAALLVEGGVPAGIVTAEGHADSEPVADNATRAGRAQNRRVEIRIEKR 452
>gi|327189144|gb|EGE56328.1| hypothetical protein RHECNPAF_7150015 [Rhizobium etli CNPAF512]
Length = 429
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 5/142 (3%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILN 104
S D+ + + ++++ + VS I I F S ++K FLP+L I LN
Sbjct: 286 SSDRLRNFLEPEIREGLVTVSEDPQQIVVIIRASGMFDSASPEVKKMFLPLLLRIGRSLN 345
Query: 105 KFPSTVIAIQSHTDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ + HTD+I + + +I+ ++ + G
Sbjct: 346 GESG-SVLLTGHTDAIPVQSLAFPSNDSLSLARASAAAEIIKSMMNDPGRVREEGRGSGE 404
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
P+ +N T GR N+RI+I I
Sbjct: 405 PVASNHTPEGRARNRRIQIIIT 426
>gi|85704170|ref|ZP_01035273.1| flagellar motor protein [Roseovarius sp. 217]
gi|85671490|gb|EAQ26348.1| flagellar motor protein [Roseovarius sp. 217]
Length = 563
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 54/161 (33%), Gaps = 14/161 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + + L V +GD + E L +
Sbjct: 405 EAEKEDLEKYRSEFFGRLRDVL-GQQEGVQIVGDRFVFS-SEVLFAPGEAELSLAGEGEI 462
Query: 97 QLIATILNKFP-------STVIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQR 144
+A IL V+ + HTD + +N +SQ RA + YL
Sbjct: 463 AKVAGILRNVIGDIPEGIDWVLQVDGHTDDVPIVEGARFADNWALSQARALSVVRYLTGV 522
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S G+ P++ +DT R N+RIE+++ R
Sbjct: 523 LGFPAERLSANGYGEFQPVNPDDTAAARAQNRRIELKLTTR 563
>gi|325105157|ref|YP_004274811.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324974005|gb|ADY52989.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 587
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ V I T + + + +L + +I+ + PS I + SHTD G
Sbjct: 459 LPVGDIETGKTFVLKDIHYDFDKSNIRPDAALILDNVVSIMKQNPSLKIELSSHTDCRGN 518
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQR 177
NL++S RA + I R + +G+ ++ ++V Q N+R
Sbjct: 519 NAYNLILSDARARSAVA-YIVRNGIEKNRLVAKGYGETKLLNNCYDGVRCSEVEHQRNRR 577
Query: 178 IEIQIF 183
E+++
Sbjct: 578 TELRVL 583
>gi|330968986|gb|EGH69052.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 96
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A L + P + ++ +TDS G+ N +S+ RA+ ++ L++ GV R ++ G+
Sbjct: 1 AAFLQENPDRKVIVEGYTDSTGSASYNQSLSERRANSVRMALVRMGVDPARVVT-MGYGK 59
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF-------PRGNIK 189
+YP+ N + GR N+R+E+ I PR ++K
Sbjct: 60 EYPVADNTSNSGRAMNRRVEVTISNDNQPVAPRSSMK 96
>gi|270263786|ref|ZP_06192055.1| peptidoglycan-associated outer membrane lipoprotein [Serratia
odorifera 4Rx13]
gi|270042670|gb|EFA15765.1| peptidoglycan-associated outer membrane lipoprotein [Serratia
odorifera 4Rx13]
Length = 180
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 17/165 (10%)
Query: 18 CGL-ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
C S + L T N S ++ +LQ I
Sbjct: 31 CSSNKSANNDQSGLGAGAGTGTENGSSNLSSEEQARLQMQELQKNNI------------- 77
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + + +F ML + L PS + ++ H D GT + N+ + + RA+
Sbjct: 78 --VYFGLDKYDVSSEFAEMLDAHSAFLRNNPSYKVTVEGHADERGTPEYNIALGERRANA 135
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +Q S IS+ + + P + N+R +
Sbjct: 136 V-KMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 179
>gi|260428791|ref|ZP_05782768.1| OmpA domain protein [Citreicella sp. SE45]
gi|260419414|gb|EEX12667.1| OmpA domain protein [Citreicella sp. SE45]
Length = 174
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 57/183 (31%), Gaps = 20/183 (10%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF--GSSLDKAEDEFQMQLQDTGI 63
L + + ++ C +R N GS+ D A + Q +
Sbjct: 7 ALMIAAVLGMAACTNGNRFSDADAAGGYGAGAGANGGIVPGSASDPASPAYFNQTIGDRV 66
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + L + L A L + I+ H D GT
Sbjct: 67 ----------------FFAVDQSTLSPQAQATLDAQAQWLMTNSDYLAVIEGHADEQGTR 110
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N+ + RA+ YL+ + ++ + + + P++ + N+R + +
Sbjct: 111 EYNIALGARRANATMEYLVSK-GIASNRLRFISYGKERPVEVCAEEACYSKNRRA-VTVI 168
Query: 184 PRG 186
G
Sbjct: 169 SMG 171
>gi|194290406|ref|YP_002006313.1| colicin transport component, peptidoglycan-associated outer
membrane lipoprotein [Cupriavidus taiwanensis LMG 19424]
gi|193224241|emb|CAQ70250.1| colicin transport component, peptidoglycan-associated outer
membrane lipoprotein [Cupriavidus taiwanensis LMG 19424]
Length = 169
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 1/113 (0%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
++ + ML A L I IQ +TD GT + NL
Sbjct: 56 NDPNSPLAKRSVYFDFDSYTVKPDYQGMLGAHAKYLGTNQGRKILIQGNTDERGTSEYNL 115
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ Q+RA+ ++ L GV ++ +V + P T + N+R +I
Sbjct: 116 ALGQKRAEAVRRSLASMGVPDSQMEAVS-LGKEKPKATGHDEASWAENRRADI 167
>gi|119504265|ref|ZP_01626345.1| peptidoglycan-associated lipoprotein [marine gamma proteobacterium
HTCC2080]
gi|119459773|gb|EAW40868.1| peptidoglycan-associated lipoprotein [marine gamma proteobacterium
HTCC2080]
Length = 182
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/178 (14%), Positives = 61/178 (34%), Gaps = 4/178 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ +F + C E ++ + +++ A
Sbjct: 9 KFASILFGSLLLIACS--GNETNDSAAAEAAAAEAAAAEEAAAVAAASAAKAQAEAAAAA 66
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
++ + V + + +L + ++ HTD GT
Sbjct: 67 EQQQLQNAAMSAGTVFYFDFDSSSMTDTARMAVDAHIAVLLSNDD-SVRLEGHTDERGTR 125
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ NL + + RA+ ++ Y++ GV S R S+ + + P+ ++ N+R+E++
Sbjct: 126 EYNLALGERRANAVRDYMVANGVPSYRIESIS-YGEENPVAFGSSEANWSQNRRVELK 182
>gi|327405327|ref|YP_004346165.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320835|gb|AEA45327.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 752
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 59/152 (38%), Gaps = 10/152 (6%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
D+ + D G+ I +++ + L I ++NK+
Sbjct: 591 FDRPGQYDVQGVLDLGMDPEVKDLSEMIQINPINFDLNKFTIRPDAAKELDKIVEVMNKY 650
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-- 164
P V+ + +HTD + N+ +S RA Y+ +R + R I +G+ ++
Sbjct: 651 PYLVVELGAHTDCRASKAYNMKLSDNRAKASAEYIKKRITNPAR-IYGKGYGESRLLNGC 709
Query: 165 -------TNDTKVGRQNNQRIEIQIFPRGNIK 189
++ ++ Q N+R E ++ G+ K
Sbjct: 710 ECEGTVKSDCSEEEHQKNRRTEFKVISTGDDK 741
>gi|114321319|ref|YP_743002.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227713|gb|ABI57512.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 276
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 9/121 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATIL-NKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + ++ +A L +F ++ I HTD IG N +S+ RAD
Sbjct: 157 DVLFDFDSAVLRAEGQDTIREVAAGLQKEFIDPLVVIVGHTDRIGDPGYNQRLSERRADA 216
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK-------VGRQNNQRIEIQIFPRGNIK 189
+ + + S R + +G P+ + N+R+E+Q+ RGN +
Sbjct: 217 VMD-ALLKNGFSRRDVVAQGRGEAEPVVFCEGDRATPALIACLSPNRRVEVQVLERGNDE 275
Query: 190 K 190
+
Sbjct: 276 R 276
>gi|66770081|ref|YP_244843.1| hypothetical protein XC_3783 [Xanthomonas campestris pv. campestris
str. 8004]
gi|77747955|ref|NP_639058.2| hypothetical protein XCC3712 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|188993294|ref|YP_001905304.1| hypothetical protein xccb100_3899 [Xanthomonas campestris pv.
campestris str. B100]
gi|66575413|gb|AAY50823.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167735054|emb|CAP53266.1| OmpA family protein [Xanthomonas campestris pv. campestris]
Length = 215
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + I + ++ L+ + +L+ +A
Sbjct: 56 QAEAQRRKTLEQALAAPLAAGRVTLVNGRIGIR---GSVLFALNSDQLQPEGREVLKSLA 112
Query: 101 TILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L+++ ++ I TD +N +S +RA + LI GV ++
Sbjct: 113 APLSEYLVSREEILMISGFTDDRPVLDSNRRYADNWELSAQRALTVTRALIAEGVPASSV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+D+N + R N+R+EI PR
Sbjct: 173 FAAA-FGSQQPVDSNADETRRAKNRRVEIAPIPR 205
>gi|332307349|ref|YP_004435200.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332174678|gb|AEE23932.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 287
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L K L +I L + + + ++DS G N +S RA IK+
Sbjct: 183 YQKNSTDLTKYSQRRLNMIGQYLKEDSDMELVLLDGYSDSYGGRDMNKTLSVSRAVEIKN 242
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
Y + + I V G + I N ++ R N+R+ I+
Sbjct: 243 YF-SEMGVAPQRIEVTGHGERRHIAPNSNEMSRAKNRRVVIR 283
>gi|299822262|ref|ZP_07054148.1| chemotaxis protein MotB [Listeria grayi DSM 20601]
gi|299815791|gb|EFI83029.1| chemotaxis protein MotB [Listeria grayi DSM 20601]
Length = 265
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 66/174 (37%), Gaps = 8/174 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
+A+++K+K + NK + + K + + + + D + I
Sbjct: 84 AMAAQDKQKSAAASKKALEKQNKMQLEAFKKKLDSYISTEHLEAKLSTRYANDGLLITIR 143
Query: 78 VHVSFV-SEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTDSIGT----LKNNLLISQ 131
+ F L + + I + + I HTD + K+N +S
Sbjct: 144 DDILFDSGSAELSASKRKIAKEIGMLFKQGDSKMEGIISGHTDDVPIHTATYKSNWELSA 203
Query: 132 ERA-DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA + +++ + + S RG+ P+ ND V R+ N+R+EI + P
Sbjct: 204 ARAVNFMEAIITENTSLDPGLFSARGYGEYKPVAKNDNAVDREKNRRVEIMVRP 257
>gi|269962741|ref|ZP_06177084.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832543|gb|EEZ86659.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 282
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 57/149 (38%), Gaps = 12/149 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + L T + + + + + V + K++
Sbjct: 122 LNQLEQQLDYVLSQTTCKPPQDIEALRSDLNIVADIYDLLNVDNQFAVDSAEINPKYMGH 181
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L A IL PS + + H D+ GT + N ++Q+RA+ +K + ++ + +
Sbjct: 182 LAEAAYILRDHPSLSLVVTGHADATGTPEYNQKLAQDRAEQVKR-YLNVFGITSDRVQTK 240
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ T R N+R+ I++
Sbjct: 241 SVGETLPLYEGQTPAVRLTNRRVSIEVLN 269
>gi|188579878|ref|YP_001923323.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
gi|179343376|gb|ACB78788.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
Length = 470
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 11/170 (6%)
Query: 21 ASREKKKVFLHKSNDTDIVN-KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A +E + + + + +A + V R G+ + I
Sbjct: 299 AVKEPAAGADQPAKAAETAALSALKAEIARAVPSLPNSAPAPHLEVRRTGEGVLISITDE 358
Query: 80 VSFV----SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQE 132
++F K + L+ IA ILN P I ++ HTD +N +S
Sbjct: 359 INFSMFGIGSAEPTPKVVKALERIAKILNSRPG-RIVVRGHTDGRPFRSETYDNWRLSSA 417
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + L++ G+ R + G+A + P D K N+RIEI +
Sbjct: 418 RAQMASYMLVRGGLDEARIERIEGYADRQPRIAADPKA--AENRRIEILL 465
>gi|89092902|ref|ZP_01165854.1| ompA family protein [Oceanospirillum sp. MED92]
gi|89082927|gb|EAR62147.1| ompA family protein [Oceanospirillum sp. MED92]
Length = 617
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 6/144 (4%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ K + L + D ++ L+ K LQ
Sbjct: 467 EAGFISQNIYKTKPMMTASLPQNYLAAIANADRLSLNFR---FHSGTFQLDNKAERDLQR 523
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ K P + +DSIG N +S +RA ++ L+ RG+ + G
Sbjct: 524 VVDFFEKNPGQQAMLIGFSDSIGDPAANASLSLQRAKAVERALLARGI---NIQTTLGMG 580
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
PI +N T++GR+ N+R+EI +
Sbjct: 581 EAAPIASNQTRIGRERNRRVEIWV 604
>gi|295395643|ref|ZP_06805835.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030]
gi|294971459|gb|EFG47342.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030]
Length = 563
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 58/166 (34%), Gaps = 11/166 (6%)
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFL 88
++ + + +DK +D+ L + + + + + +
Sbjct: 226 ADNEDPADEYGSPEAKRYIDKLQDK-TESLLGSSTTTADATTALNITA-DVLFDFDKSEI 283
Query: 89 EKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
K +L +A LN+ + + HTD+ G N +S++RA ++ L + +
Sbjct: 284 NDKGHKVLGNVAKTLNQQAAGQTVKVVGHTDAKGDENYNKKLSEDRAKAVQKELQPQLNN 343
Query: 148 SNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQIFPRGN 187
+ G PI N D + + N+R+ + P
Sbjct: 344 VK--LETEGRGETQPIAKNFDDKGNDLEANQAKNRRVSFEFKPTDT 387
>gi|23502572|ref|NP_698699.1| hypothetical protein BR1714 [Brucella suis 1330]
gi|161619642|ref|YP_001593529.1| hypothetical protein BCAN_A1752 [Brucella canis ATCC 23365]
gi|254703491|ref|ZP_05165319.1| hypothetical protein Bsuib36_06117 [Brucella suis bv. 3 str. 686]
gi|260568797|ref|ZP_05839265.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261754122|ref|ZP_05997831.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686]
gi|23348573|gb|AAN30614.1| OmpA family protein [Brucella suis 1330]
gi|161336453|gb|ABX62758.1| OmpA/MotB domain protein [Brucella canis ATCC 23365]
gi|260154181|gb|EEW89263.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261743875|gb|EEY31801.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686]
Length = 343
Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---T 109
++ + +GD + + K ++ +A + + P
Sbjct: 205 EILSDKENIRIVGDRFVFQ-SEVLFPTGSAEINPKGQVEIKKLADAIIQLNREIPDDINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI GV +NR ++ GF P+D
Sbjct: 264 VLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGEYQPLD 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
T +T R N+RIE+++ R
Sbjct: 323 TANTADARARNRRIELKLTER 343
>gi|315635427|ref|ZP_07890693.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315480185|gb|EFU70852.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 316
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
++ ++ IA ILN+ P+ + + HTDS G N ISQ+
Sbjct: 206 ILKDKKISFERKSSIPTEQSQNTIKEIAKILNENPNFKVEVAGHTDSRGEAALNKQISQD 265
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ +K+ ++ + I G+ ++PI +D + N+R+E I
Sbjct: 266 RANSVKN-ILVNSGVNETRIKAIGYGEEFPIAKDDENGLSEINRRVEFII 314
>gi|295134914|ref|YP_003585590.1| OmpA/MotB domain-containing protein [Zunongwangia profunda SM-A87]
gi|294982929|gb|ADF53394.1| OmpA/MotB domain-containing protein [Zunongwangia profunda SM-A87]
Length = 618
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V GD I +E + + L I +L FP I I+SHTDS G+
Sbjct: 494 VEIDGDEEKIKIDPIFFEFNEYDIRPRAAKQLDHIVYVLESFPEMKIKIESHTDSRGSDT 553
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY-------KYPIDTNDTKVGRQNNQR 177
NLL+SQ RA K+YLI RG++ NR +S++G+ ++ ND + N+R
Sbjct: 554 YNLLLSQNRAKSTKNYLISRGIAENRIVSIKGYGEIEILNRCVNGVECND--EEHEENRR 611
Query: 178 IEIQIF 183
I
Sbjct: 612 SNFIIV 617
>gi|254500992|ref|ZP_05113143.1| peptidoglycan-associated lipoprotein, putative [Labrenzia
alexandrii DFL-11]
gi|222437063|gb|EEE43742.1| peptidoglycan-associated lipoprotein, putative [Labrenzia
alexandrii DFL-11]
Length = 158
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 49/121 (40%), Gaps = 3/121 (2%)
Query: 68 IGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
G + V F + L + L A L+++ I ++ H D GT + N
Sbjct: 39 TGQDFVVNVGDRVFFEEDQSTLNSQGQATLANQAKWLSRYSKYTITVEGHADERGTRQYN 98
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ + RA + YL+ +GVS++R ++ + + P+ + N+R + +
Sbjct: 99 IALGARRAQAARDYLVSQGVSASRIKTIS-YGKERPVAVCNDNSCWSQNRRA-VTVLNNA 156
Query: 187 N 187
Sbjct: 157 T 157
>gi|254452426|ref|ZP_05065863.1| OmpA domain protein [Octadecabacter antarcticus 238]
gi|198266832|gb|EDY91102.1| OmpA domain protein [Octadecabacter antarcticus 238]
Length = 612
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 2/148 (1%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM- 95
+ + + + E + + ++ ++F
Sbjct: 425 EKLGEAEEFEVSVTYVEALDPIAALPTTEECLDQIMNVTESRKITFEPSSARIAGAGAAI 484
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L I IL + I I +TDS G+ N +SQ+RAD + L R V F SV
Sbjct: 485 LDDITEILQRCADLRIEIAGYTDSQGSEDGNQRLSQQRADAVLDGLRVRRVPVASFRSV- 543
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
G+ PI N+T GR+ N+RIE +
Sbjct: 544 GYGEADPIADNETADGREANRRIEFSLI 571
>gi|166713623|ref|ZP_02244830.1| hypothetical protein Xoryp_19825 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 224
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 13/149 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + + I + + L+ + +L+ +A
Sbjct: 56 QAEAQRRQTLEQALAAPLAAGRVTL--VDGRIGIR-GNVLFAFNSDELQPEGREVLKSLA 112
Query: 101 TILNKFPSTV---IAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L ++ T + + TD +N +S +RA + LI GV ++
Sbjct: 113 APLAQYLRTREEILMVSGFTDDRPVLGGNRRYADNWELSAQRALTVTRALIAEGVPASSV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ F + P+D+N + R N+R+EI
Sbjct: 173 FAAA-FGSQQPVDSNADEARRAKNRRVEI 200
>gi|241662342|ref|YP_002980702.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12D]
gi|240864369|gb|ACS62030.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12D]
Length = 173
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 39/116 (33%), Gaps = 1/116 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
++ ++ +L + L + IQ +TD GT +
Sbjct: 58 ELTDPNSPLAKRSIYFDFDSYSVKPEYQGLLGQHSRYLQSHNQRKVLIQGNTDERGTSEY 117
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL + Q+RA+ ++ + + + + P T + N+R +I
Sbjct: 118 NLALGQKRAEAVRR-ALSSMGVPDSQMEAVSLGKEKPQATGHDEDSWAQNRRADIV 172
>gi|83310388|ref|YP_420652.1| hypothetical protein amb1289 [Magnetospirillum magneticum AMB-1]
gi|82945229|dbj|BAE50093.1| Flagellar motor protein [Magnetospirillum magneticum AMB-1]
Length = 333
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 16/185 (8%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF---QMQLQDTGIVVSR 67
+ + +E+K ++ L K EF ++ +
Sbjct: 147 VAAALDASETRDKEQKAQISDLGKRLNVALAGKVEELQKYRSEFFGRLRKVLGDRPGIRI 206
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTD-- 118
GD + L + ++ +A + + + V+ + HTD
Sbjct: 207 EGDRFVFQ-SELLFATGSAELGTEGAEQVRKLAATIREINAGMPKGLNWVLRVDGHTDKR 265
Query: 119 --SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+ G +N +S RA + L GV +R ++ GF P+D+ +T+ N+
Sbjct: 266 PITSGKFPSNWELSTARAITVLRALAADGVPRDR-LAAAGFGEFQPVDSGNTEAAYAKNR 324
Query: 177 RIEIQ 181
RIEI+
Sbjct: 325 RIEIR 329
>gi|300694450|ref|YP_003750423.1| transmembrane protein, ompa/motb motif [Ralstonia solanacearum
PSI07]
gi|299076487|emb|CBJ35807.1| putative transmembrane protein, OmpA/MotB motif [Ralstonia
solanacearum PSI07]
Length = 215
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 65/193 (33%), Gaps = 22/193 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE-FQMQLQDTG 62
+ L F++ +S + + + + ++ ++ + + L
Sbjct: 24 SVLLGAFVLILVS----------VIAVQLELSSKLADEVKQRQMEAQRRKTLEQALAGPL 73
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF---PSTVIAIQSH-- 116
I V F + L+ + +L+ +A L+ + ++ +
Sbjct: 74 AAGRVTLVNGRIGISGSVLFALNSDQLQPEGRELLKSLAGPLSAYLKSRDEILMVSGFAD 133
Query: 117 ----TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+N +S +RA + LI G+ + F + P+ +N GR
Sbjct: 134 DQQVHAGNRRFADNWELSAKRALTVTRALIDAGIPGASVFAAA-FGSEQPVSSNTDDEGR 192
Query: 173 QNNQRIEIQIFPR 185
N+R+EI PR
Sbjct: 193 AKNRRVEIAPVPR 205
>gi|332665245|ref|YP_004448033.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332334059|gb|AEE51160.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 798
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
A +E + +Q +V + + + ++ L+ + +A+ LN P
Sbjct: 668 AGNELEQDIQLFDPIVEKT-----IILENIIFLSNQAELDSSAYSEIHRLASFLNANPQL 722
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ I +HT++ T ++ RA+ I LI +++ R I RG + P+ +N T
Sbjct: 723 GVEIVAHTNNNCTYNFAADLTARRAEKIAELLIDAQIAAER-IRHRGSGKEQPLVSNATL 781
Query: 170 VGRQNNQRIEIQIFP 184
GR NQR+EI P
Sbjct: 782 TGRLANQRVEITFIP 796
>gi|332524606|ref|ZP_08400809.1| OmpA family domain protein [Rubrivivax benzoatilyticus JA2]
gi|332107918|gb|EGJ09142.1| OmpA family domain protein [Rubrivivax benzoatilyticus JA2]
Length = 240
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G +P L + L + LN+ P+ + HTD G NL
Sbjct: 125 TGRAPPVPVPGVEFEPGSARLTDAGIERLDGLLAALNRAPARRFEVVGHTDDAGPRDLNL 184
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S+ERA+ ++++L+ RGV++ R I VRG P N T GR N+RIE++
Sbjct: 185 ALSRERAEAVRAHLVARGVAAAR-IEVRGAGPDEPAADNGTAAGRARNRRIELR 237
>gi|291562029|emb|CBL40845.1| Flagellar motor protein [butyrate-producing bacterium SS3/4]
Length = 313
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 60/186 (32%), Gaps = 20/186 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI---VVSRIGDMITCY 75
K D ++K L G+ V R D
Sbjct: 68 SDTPEVDSKGQEIGQEDLQA------EDVNKLYLTIAESLNQAGVKEATVIRGDDYTYVS 121
Query: 76 IPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS--TVIAIQSHTD--------SIGTLK 124
+V F + L ++ +L A + + I SHT + ++
Sbjct: 122 FANNVFFGANSSVLTREGQAVLYTFAKAIAPAAGGIEQVNIMSHTAKVTDNSQINPQIIR 181
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ ++S R+ + YL Q+ V + + PI N T+ GR N+RIE +
Sbjct: 182 KDRILSAMRSAEVCIYLQQQNVIKPEKLVDISYGEYRPIADNSTEEGRIKNRRIEFLLLD 241
Query: 185 RGNIKK 190
G ++
Sbjct: 242 NGAKER 247
>gi|163858178|ref|YP_001632476.1| hypothetical protein Bpet3863 [Bordetella petrii DSM 12804]
gi|163261906|emb|CAP44208.1| OmpA-family protein [Bordetella petrii]
Length = 215
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 59/142 (41%), Gaps = 13/142 (9%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF-- 106
+ E L + + + I + ++ L+ + +L+ + L+ +
Sbjct: 64 ELEQALAGPLAAGRVTL--VDGRIGIS-GSVLFALNSDELQPEGEEVLKSLVGPLSAYLQ 120
Query: 107 -PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
V+ + TD+ +N +S +RA + LI++G++ + F
Sbjct: 121 ARDEVLMVSGFTDNQPVHGNNRRFADNWDLSAQRALTVTRALIEQGIAPASVFAAA-FGA 179
Query: 160 KYPIDTNDTKVGRQNNQRIEIQ 181
+ P+ +ND+ GR +N+R+EI
Sbjct: 180 EQPVASNDSAEGRASNRRVEIV 201
>gi|256823714|ref|YP_003147677.1| type IV / VI secretion system protein, DotU family [Kangiella
koreensis DSM 16069]
gi|256797253|gb|ACV27909.1| type IV / VI secretion system protein, DotU family [Kangiella
koreensis DSM 16069]
Length = 439
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 7/165 (4%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFL 88
+ ++ + + ++ + V D + I + + S L
Sbjct: 267 VPENKVDLASSDSVINYAKNLRQLLSTEIGRGLLQVVEDIDHVAIIITSNQMYSSASAQL 326
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQR 144
+ + +++ I I P I + H+D +N +S RA+ + L Q
Sbjct: 327 NENSIALIEKIGQIATTTPG-HIQVVGHSDDQKIFTAKYHSNWELSLARANSVVRILNQN 385
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ R ++ G P NDT R N+R+EI ++ + K
Sbjct: 386 QNLAGR-VTAEGRGAAEPRVANDTDTNRALNRRVEILLWVKDKFK 429
>gi|83311658|ref|YP_421922.1| flagellar motor protein [Magnetospirillum magneticum AMB-1]
gi|82946499|dbj|BAE51363.1| Flagellar motor protein [Magnetospirillum magneticum AMB-1]
Length = 220
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 63/198 (31%), Gaps = 19/198 (9%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ L M + + K + DI + + L E Q+ G+
Sbjct: 25 ITLLMAFFIVLVSMSKIDKNKYEQVQQG-MAKDIGLRETKTPLQDLRSEVLGQVAGAGVE 83
Query: 65 ----VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHT 117
V R I + F + + LP+++ I+ L + F + I IQ HT
Sbjct: 84 DTVDVGRDDKGIVLNLASGTMFKPGSAEVRPEILPLMKEISGTLKQERFLNYQIDIQGHT 143
Query: 118 DSIGTLKNNLLISQERADVIKS----YLIQRGVSSNRFISVRGFAYKYPIDTNDT----- 168
D S ++ ++ + + A P N +
Sbjct: 144 DDTPVR-TPQFPSNWDLSAARALSTLKVMNELGIPTSRMKLAALADTAPRVPNRSDTGKA 202
Query: 169 -KVGRQNNQRIEIQIFPR 185
+ N+R+EI I+PR
Sbjct: 203 YPENQAINRRVEIHIYPR 220
>gi|221210851|ref|ZP_03583831.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
gi|221169807|gb|EEE02274.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
Length = 214
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 56/158 (35%), Gaps = 13/158 (8%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ E L + + I + + ++ L+ +L+
Sbjct: 53 ARQQEAQQRKTLEQALAGPLAAGRVTLVNGRIGIAGNL---LFALNSDQLQPDGRELLKT 109
Query: 99 IATILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSN 149
+A L + ++ + D +N +S +RA + LI GV ++
Sbjct: 110 LAGPLAAYLKTRDQILMVSGFADDQQVRAGNRMFADNWELSAKRALTVTRALIDAGVPAS 169
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ F + P+ +N GR N+R+EI PR +
Sbjct: 170 SVFAAA-FGSEQPVSSNADDEGRAKNRRVEIAPVPRKS 206
>gi|90407045|ref|ZP_01215235.1| outer membrane protein [Psychromonas sp. CNPT3]
gi|90311916|gb|EAS40011.1| outer membrane protein [Psychromonas sp. CNPT3]
Length = 383
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + ++ P L + L + I + HTDS+G+ K N +S++RA V+ Y
Sbjct: 285 LYFNSSKIKTS--PELTNVVVQLLQTKEGDIEVIGHTDSLGSKKYNQWLSEKRAQVVADY 342
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L++ GV +R I V+G + +N+T GR N+R++I+
Sbjct: 343 LVKEGVDPSRII-VKGEGESSFVSSNETAEGRAKNRRVKIK 382
>gi|78186498|ref|YP_374541.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like [Chlorobium luteolum DSM 273]
gi|78166400|gb|ABB23498.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like protein [Chlorobium luteolum DSM
273]
Length = 154
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 1/106 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + L + L+ A ++ S + ++ H D GT + N+ + + RA
Sbjct: 48 LGDVFFDFDQSALRMDAVSQLKNNAAWMDANRSKRVIVEGHCDERGTNEYNMALGERRAS 107
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
K Y++ S I + + P T+ N+R
Sbjct: 108 SAKEYIVSL-GISPERIETLSYGEEKPFAQGSTEEAWAQNRRAHFV 152
>gi|197106106|ref|YP_002131483.1| OmpA family protein [Phenylobacterium zucineum HLK1]
gi|196479526|gb|ACG79054.1| OmpA family protein [Phenylobacterium zucineum HLK1]
Length = 178
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 13/172 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ ++ ++ C + ++ + +V
Sbjct: 8 VLITAAAALSLGACASRPKAAAPTVPPAASAPAETAAPAPAP------------AMGAVV 55
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
D+ + L+ + +LQL A L + P+ I+ + D GT +
Sbjct: 56 PGSQEDLAANAGERVYFALDSDLLDAEARSVLQLQAAWLQRNPTVRARIEGNADERGTRE 115
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
NL + RA + +LI+ GV S R ++ + + PID T+ N+
Sbjct: 116 YNLALGARRAQAARQFLIRSGVDSTRLETIS-YGKERPIDPGSTEEAWARNR 166
>gi|227115434|ref|ZP_03829090.1| putative porin [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 505
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 67/174 (38%), Gaps = 7/174 (4%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE-----FQMQLQDTGIVVSRI 68
++G + + V + +L K E LQ +
Sbjct: 51 LVTGDAKKAVAGGLLGGAAGCALGNVWQNREEALAKIAQEENIAMTTRALQSQEKSGTET 110
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTDSIGTLKNNL 127
++ + + L L ++ IAT + + S VI + HTD+ G+ + N
Sbjct: 111 VGLVAQVQDSGMFDTNSAQLSTDGLRQVKKIATAMKEGDQSGVILVVGHTDATGSAEWNQ 170
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S++RA + ++++ S + + +G P+ N T GR N+R+EI
Sbjct: 171 RLSEQRAQNVGR-VLEQAGLSAQKLYFQGAGSARPVADNATVTGRTANRRVEIV 223
>gi|170697118|ref|ZP_02888213.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170137954|gb|EDT06187.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 171
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 58/192 (30%), Gaps = 28/192 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K V + + V K L
Sbjct: 1 MMKSSL--------------------PVSMGRRCVGSAVLLCLLLGGCKTPPTLHRGLTQ 40
Query: 61 TGIV------VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
T + G + F L+ +++ I L + +
Sbjct: 41 TQVTALKSAGFQETGQGFEFGSSGPILFDFDRYNLKPDVRRIVERIGRTLKSAGINGVRV 100
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
++D G + +L +S+ RA+V+ L+ + I+V G P+ N T GR
Sbjct: 101 YGYSDDEGEVAYDLELSRRRAEVVAIELVD-VGLDGKRIAVVGKGKSDPVGDNRTPTGRA 159
Query: 174 NNQRIEIQIFPR 185
N+R I + PR
Sbjct: 160 QNRRAAIVVSPR 171
>gi|86142013|ref|ZP_01060537.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein-like [Leeuwenhoekiella blandensis MED217]
gi|85831576|gb|EAQ50032.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein-like [Leeuwenhoekiella blandensis MED217]
Length = 435
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 42/100 (42%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ ++ IA + + I HTDS G + N+ +S+ RA+ +K+
Sbjct: 333 FDSGSASIQPASYASIKQIAQAIQSDATGNYLITGHTDSDGDVALNMPLSESRAEAVKAA 392
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
L+ + + G P+ T +T + N+R+ I
Sbjct: 393 LVSEFGIDSSRLQTAGKGSSEPVSTENTVTAKALNRRVTI 432
>gi|328675516|gb|AEB28191.1| 18K peptidoglycan-associated outer membrane lipoprotein;
Peptidoglycan-associated lipoprotein precursor; Outer
membrane protein P6; OmpA/MotB precursor [Francisella
cf. novicida 3523]
Length = 209
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 65/202 (32%), Gaps = 28/202 (13%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ +++ + M ++ C + + K D SS + +
Sbjct: 1 MMKKRIMNLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSS----QIYGSDK 56
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + +++ + L A L P I + +T
Sbjct: 57 MSSDQVE-QMKKELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNT 115
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT------------ 165
D G+ K N + Q+RA+ + +YL+ + + I V + P
Sbjct: 116 DPRGSEKYNFNLGQKRAEAVYNYLLGK-NVNKDQICVVSYGKLKPAAEPTQFYDEFCKDG 174
Query: 166 -ND------TKVGRQNNQRIEI 180
ND ++ ++R EI
Sbjct: 175 VNDACMYKASEKAFYLDRRTEI 196
>gi|254475683|ref|ZP_05089069.1| OmpA/MotB [Ruegeria sp. R11]
gi|214029926|gb|EEB70761.1| OmpA/MotB [Ruegeria sp. R11]
Length = 177
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ V + L + L A L P ++ I+ H D GT + NL + RA+
Sbjct: 67 DRVLFAVDQSTLSEAAKATLVGQARWLTSNPDYIVTIEGHADEQGTREYNLALGARRANA 126
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ +LI +GV+ +R + V + + P++ + N+R
Sbjct: 127 AREFLISQGVAGSR-LQVVSYGKERPLEICSNEACYAKNRR 166
>gi|332188277|ref|ZP_08390004.1| ompA family protein [Sphingomonas sp. S17]
gi|332011673|gb|EGI53751.1| ompA family protein [Sphingomonas sp. S17]
Length = 175
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 68/183 (37%), Gaps = 22/183 (12%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
G+ + T +SGCG ++ + ++ + + + ++ + Q + +
Sbjct: 5 GMMAGLATMLSGCGEGGEVARQAGSNGTSIELPIPEPSPGATARSAAKPPAQPDASATTI 64
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
L+++ L +A + ++ H+DS G
Sbjct: 65 --------------GFPEGGAELDREAKAALDRLAAD-PAVRQGHLILRGHSDSDGDDAG 109
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIE 179
N +S++RA+ + YL + ++ + V PI N D GR N+R+E
Sbjct: 110 NRRMSRQRAEAARDYLAGK-GIASARMKVIALGETRPIAPNAKPDGTDDSAGRARNRRVE 168
Query: 180 IQI 182
I++
Sbjct: 169 IEL 171
>gi|120436189|ref|YP_861875.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
gi|117578339|emb|CAL66808.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
Length = 620
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + + L + ++ ++P VI I SHTD GT N +++ R
Sbjct: 506 EIDNIYFDFDKSNIRPDAATELDKLVALMKDEYPELVIEIGSHTDRRGTNSYNEKLAERR 565
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND--TKVGRQNNQR 177
A YL+ +G+S +R + +G+ P D ++ Q N+R
Sbjct: 566 AKSTYDYLVSKGISEDRIVEFKGYGETKPAIDCDRCSEKDHQLNRR 611
>gi|331006081|ref|ZP_08329417.1| OmpA/MotB domain containing protein [gamma proteobacterium
IMCC1989]
gi|330420118|gb|EGG94448.1| OmpA/MotB domain containing protein [gamma proteobacterium
IMCC1989]
Length = 262
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + + P+ + I HTDS+G +NL S+ER ++
Sbjct: 105 SLYYNDAEELKSSARRYLNQVADYVKEDPAVKTVYIDGHTDSVGVRADNLEKSKERTALV 164
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YL+++ S I R +Y + TN T GR N+R+ +++
Sbjct: 165 VDYLVEK-GVSPDMIVARWHGERYQVATNQTAKGRATNRRVTLRL 208
>gi|239943905|ref|ZP_04695842.1| putative secreted protein [Streptomyces roseosporus NRRL 15998]
gi|239990359|ref|ZP_04711023.1| putative secreted protein [Streptomyces roseosporus NRRL 11379]
Length = 219
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 73/195 (37%), Gaps = 17/195 (8%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED------------EFQ 55
+ TT+ G L+ + + T + + +
Sbjct: 25 VLIAGTTLLGAPLSYADDGPSVPPGTEATSEPPVPVDPNDPDLKMPEGGTLAPGRVLDIV 84
Query: 56 MQLQDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
++D G R + L + IA + K +T I
Sbjct: 85 QVVEDLGGEERREDSNADIKFALQAEVLFGKDSAKLSSAANARIAAIAEEIKKQNATKIR 144
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+ TD++G+ + ++S++RAD + L ++ + +RG+ +YPI +N + GR
Sbjct: 145 VFGFTDNLGSSAHGDVLSKQRADAVHGVLSKQLGPTV-TYEIRGYGEQYPIASNSNEEGR 203
Query: 173 QNNQRIEIQIFPRGN 187
+ N+R+E+ FPRG
Sbjct: 204 KKNRRVEVS-FPRGE 217
>gi|161521586|ref|YP_001585013.1| hypothetical protein Bmul_5051 [Burkholderia multivorans ATCC
17616]
gi|189352247|ref|YP_001947874.1| hypothetical protein BMULJ_03465 [Burkholderia multivorans ATCC
17616]
gi|160345636|gb|ABX18721.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
gi|189336269|dbj|BAG45338.1| putative flagellar motor protein [Burkholderia multivorans ATCC
17616]
Length = 214
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 56/158 (35%), Gaps = 13/158 (8%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ E L + + I + + ++ L+ +L+
Sbjct: 53 ARQQEAQQRKTLEQALAGPLAAGRVTLVNGRIGIAGNL---LFALNSDQLQPDGRELLKT 109
Query: 99 IATILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSN 149
+A L + ++ + D +N +S +RA + LI GV ++
Sbjct: 110 LAGPLAAYLKTRDQILMVSGFADDQQVRAGNRMFADNWELSAKRALTVTRALIDAGVPAS 169
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ F + P+ +N GR N+R+EI PR +
Sbjct: 170 SVFAAA-FGSEQPVSSNADDEGRAKNRRVEIAPVPRKS 206
>gi|294663979|ref|ZP_06729397.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292606252|gb|EFF49485.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 144
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Query: 73 TCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + F + + +L + L K + + ++ HTD+ G+ N +S+
Sbjct: 29 LITLNDRILFDFDKSDIRADAARVLDTLGAALTKVTAKDMQVRGHTDAKGSDDYNQALSE 88
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQI 182
RA+ + + L RG + + +G P+ N D GRQ N+R+EI +
Sbjct: 89 RRANAVLAALRARGAAQSAN--AKGDGESQPVAPNTVNGQDNPGGRQLNRRVEIFL 142
>gi|108761081|ref|YP_635504.1| OmpA family protein [Myxococcus xanthus DK 1622]
gi|108464961|gb|ABF90146.1| OmpA family protein [Myxococcus xanthus DK 1622]
Length = 352
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 14/178 (7%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI------VVSRIGD 70
C E+ L + D+ D E + + + G V D
Sbjct: 179 AC---PDEEGLPSLRGCPERDVDGDGVADHRDNCPRE-RGAVDNQGCPAARKQRVVIRPD 234
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLI 129
+ + L+ + P L +A +L P VIAI+ HTD+ G +
Sbjct: 235 RLEL-LERITFAPGTAALQPRVQPALDNVADVLLVHPRLGVIAIEGHTDNRGDPDVQREV 293
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF-PRG 186
+ RA+ ++ YL++RGV +R + GF P+++N+T GR+ N+R+++++ PRG
Sbjct: 294 TLARAEAVRDYLVERGVPPDR-LEAWGFGPDKPVESNETAQGREANRRLDLRVVAPRG 350
>gi|83594714|ref|YP_428466.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
gi|83577628|gb|ABC24179.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
Length = 242
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 47/104 (45%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
P + L+ P+L A +L + P + + HTD L L +S RA+
Sbjct: 136 PSLHFASDQADLDDDAGPLLAEAARVLKQDPRLSLMVMGHTDDRHALDEALDLSARRAEA 195
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ + L++ + RG + P+ +N T+ GR N+R+++
Sbjct: 196 VVAALVEDHGVERGRLVPRGAGWLAPVASNRTQAGRALNRRVDL 239
>gi|17986607|ref|NP_539241.1| hypothetical protein BMEI0324 [Brucella melitensis bv. 1 str. 16M]
gi|62290586|ref|YP_222379.1| hypothetical protein BruAb1_1699 [Brucella abortus bv. 1 str.
9-941]
gi|82700502|ref|YP_415076.1| hypothetical protein BAB1_1726 [Brucella melitensis biovar Abortus
2308]
gi|163845293|ref|YP_001622948.1| hypothetical protein BSUIS_B1189 [Brucella suis ATCC 23445]
gi|189024803|ref|YP_001935571.1| hypothetical protein BAbS19_I16130 [Brucella abortus S19]
gi|225853169|ref|YP_002733402.1| hypothetical protein BMEA_A1766 [Brucella melitensis ATCC 23457]
gi|237816090|ref|ZP_04595086.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254689881|ref|ZP_05153135.1| hypothetical protein Babob68_06877 [Brucella abortus bv. 6 str.
870]
gi|254698031|ref|ZP_05159859.1| hypothetical protein Babob28_10068 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730915|ref|ZP_05189493.1| hypothetical protein Babob42_06907 [Brucella abortus bv. 4 str.
292]
gi|256045322|ref|ZP_05448216.1| hypothetical protein Bmelb1R_12582 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256061749|ref|ZP_05451886.1| hypothetical protein Bneo5_15516 [Brucella neotomae 5K33]
gi|256114280|ref|ZP_05455025.1| hypothetical protein Bmelb3E_15803 [Brucella melitensis bv. 3 str.
Ether]
gi|256258134|ref|ZP_05463670.1| hypothetical protein Babob9C_12474 [Brucella abortus bv. 9 str.
C68]
gi|256263341|ref|ZP_05465873.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str.
63/9]
gi|256370121|ref|YP_003107632.1| flagellar motor protein [Brucella microti CCM 4915]
gi|260547172|ref|ZP_05822910.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038]
gi|260565786|ref|ZP_05836269.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
16M]
gi|260755413|ref|ZP_05867761.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260758635|ref|ZP_05870983.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260762467|ref|ZP_05874804.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884428|ref|ZP_05896042.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|261325753|ref|ZP_05964950.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33]
gi|265991747|ref|ZP_06104304.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265995585|ref|ZP_06108142.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|297248983|ref|ZP_06932691.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196]
gi|17982219|gb|AAL51505.1| chemotaxis motb protein [Brucella melitensis bv. 1 str. 16M]
gi|62196718|gb|AAX75018.1| OmpA family protein [Brucella abortus bv. 1 str. 9-941]
gi|82616603|emb|CAJ11682.1| OmpA/MotB domain [Brucella melitensis biovar Abortus 2308]
gi|163676016|gb|ABY40126.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189020375|gb|ACD73097.1| OmpA/MotB domain protein [Brucella abortus S19]
gi|225641534|gb|ACO01448.1| OmpA/MotB domain protein [Brucella melitensis ATCC 23457]
gi|237788753|gb|EEP62965.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|256000284|gb|ACU48683.1| flagellar motor protein [Brucella microti CCM 4915]
gi|260095537|gb|EEW79415.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038]
gi|260151159|gb|EEW86254.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
16M]
gi|260668953|gb|EEX55893.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260672893|gb|EEX59714.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675521|gb|EEX62342.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260873956|gb|EEX81025.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|261301733|gb|EEY05230.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33]
gi|262766869|gb|EEZ12487.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|263002703|gb|EEZ15106.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093340|gb|EEZ17409.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str.
63/9]
gi|297174116|gb|EFH33473.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196]
gi|326409725|gb|ADZ66790.1| OmpA/MotB domain protein [Brucella melitensis M28]
gi|326539433|gb|ADZ87648.1| OmpA/MotB domain protein [Brucella melitensis M5-90]
Length = 343
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---T 109
++ + +GD + + K ++ +A + + P
Sbjct: 205 EILSDKENIRIVGDRFVFQ-SEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIPDDINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI GV +NR ++ GF P+D
Sbjct: 264 VLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGEYQPLD 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
T +T R N+RIE+++ R
Sbjct: 323 TANTADARARNRRIELKLTER 343
>gi|306844705|ref|ZP_07477290.1| Hypothetical protein BIBO1_1384 [Brucella sp. BO1]
gi|306274877|gb|EFM56647.1| Hypothetical protein BIBO1_1384 [Brucella sp. BO1]
Length = 343
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---T 109
++ + +GD + + K ++ +A + + P
Sbjct: 205 EILSDKENIRIVGDRFVFQ-SEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIPDDINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI GV +NR ++ GF P+D
Sbjct: 264 VLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGEYQPLD 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
T +T R N+RIE+++ R
Sbjct: 323 TANTADARARNRRIELKLTER 343
>gi|83312092|ref|YP_422356.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
gi|82946933|dbj|BAE51797.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
Length = 167
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + L+ K +L +A IL + S + I+ H D GT + NL I + R
Sbjct: 56 LREMEILFAAGRLDLDAKARQILDDVAGILAREASIPVIIEGHADDTGTREYNLAIGERR 115
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
A+ ++ YLI RGV R I F + P TK R N+R+ +++ P
Sbjct: 116 AETVRQYLIGRGVDGER-IRAISFGKERPRAPGRTKAARAANRRVVVRLEP 165
>gi|209695330|ref|YP_002263259.1| sodium-type flagellar protein MotY precursor [Aliivibrio
salmonicida LFI1238]
gi|208009282|emb|CAQ79548.1| sodium-type flagellar protein MotY precursor [Aliivibrio
salmonicida LFI1238]
Length = 292
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ + L K L IA + ++ + ++TDS G N +S+
Sbjct: 179 ISFTILHFDKNSDELNKASKKRLAQIADFIKYTKDIDLVLVATYTDSSGAKNVNQQVSER 238
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA +++Y + I V + + PI N T +G+ N+R+ I +
Sbjct: 239 RAVKLQNYF-ESIGLPADRIRVHSYGERRPIADNSTPIGKNKNRRVVISL 287
>gi|254694373|ref|ZP_05156201.1| hypothetical protein Babob3T_06882 [Brucella abortus bv. 3 str.
Tulya]
gi|261214683|ref|ZP_05928964.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|260916290|gb|EEX83151.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
Length = 343
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------ST 109
++ + +GD + + K ++ +A + + +
Sbjct: 205 EILSDKENIRIVGDRFVFQ-SEVLFPTGSAEINPKGQVEMKKLADAIIQLNPEIPDDINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI GV +NR ++ GF P+D
Sbjct: 264 VLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGEYQPLD 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
T +T R N+RIE+++ R
Sbjct: 323 TANTADARARNRRIELKLTER 343
>gi|189461399|ref|ZP_03010184.1| hypothetical protein BACCOP_02054 [Bacteroides coprocola DSM 17136]
gi|189431928|gb|EDV00913.1| hypothetical protein BACCOP_02054 [Bacteroides coprocola DSM 17136]
Length = 239
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/223 (18%), Positives = 77/223 (34%), Gaps = 43/223 (19%)
Query: 1 MIKELGLSMFIM--TTISGCGL---ASREKKKVFLHKSNDTDIVNKR------------- 42
M K +++ + SGCG ++ + ++
Sbjct: 1 MKKTSFMAILLSACLVFSGCGSLNNTAKGGMIGGGSGAALGALIGGIAGHGKGAAIGAAV 60
Query: 43 -----------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFVSEVFL 88
G +DKA ++ Q+Q + + + + F +
Sbjct: 61 GAAVGTGAGVLIGKKMDKAAEQ-AAQIQGAEVEQVTDNNGLQAVKVTFDSGILFSTSSSS 119
Query: 89 EKKFLPMLQLIATI--LNKFPSTVIAIQSHTDSIGTL--------KNNLLISQERADVIK 138
LN+ +AI +TD+ G + N +SQ RA +
Sbjct: 120 LSTSAKSSLSKFANNVLNQNRDMDVAIYGYTDNTGWKNSTAEQSVQKNQELSQARAQSVS 179
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
SYL+ GVS+++ +V G P+ N T+ GR+ N+R+E+
Sbjct: 180 SYLLGCGVSASQIKTVEGMGESNPVADNSTEAGRKENRRVEVY 222
>gi|170703211|ref|ZP_02894016.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170131877|gb|EDT00400.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 214
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 54/158 (34%), Gaps = 13/158 (8%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ E L + + I+ + ++ L+ + +L+
Sbjct: 53 ARQQEAQQRKSLEQALAGPLAAGRVTLVNGRIGIS---GAVLFALNSDQLQPEGRDLLKT 109
Query: 99 IATILNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSN 149
+A L + ++ + D +N +S +RA + LI
Sbjct: 110 LAGPLAAYLKTRDEILMVSGFADDQQVRAGNRKFADNWELSAKRALTVTRALIDA-GVPA 168
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
R + F + P+ +N GR N+R+EI PR +
Sbjct: 169 RSVFAAAFGSEQPVSSNADDEGRAKNRRVEIAPVPRKS 206
>gi|317133447|ref|YP_004092761.1| OmpA/MotB domain protein [Ethanoligenens harbinense YUAN-3]
gi|315471426|gb|ADU28030.1| OmpA/MotB domain protein [Ethanoligenens harbinense YUAN-3]
Length = 259
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 9/171 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSL---DKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
+ + + ++ T V + D+ + +S + +
Sbjct: 66 SQNTNSTNITMSNTSTTSEVISQVQDWSSLYDQVTKLVAQAGLQKNVDLSSTSKGLVITL 125
Query: 77 PVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQ 131
+ + + + ++ I L + +I ++ HTDS ++N+ +S
Sbjct: 126 KDNTLYTPGSAVMNQPGQDLVLRIGDALKQVNYALIIVEGHTDSDPIHNAQFQDNIELSS 185
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD ++ LI R I+ G P+ NDT + N+R+ I I
Sbjct: 186 ARADNVERALIGR-GLDAAKIAAMGRGDTVPVAPNDTPANKAKNRRVVITI 235
>gi|254463477|ref|ZP_05076893.1| OmpA family protein [Rhodobacterales bacterium HTCC2083]
gi|206680066|gb|EDZ44553.1| OmpA family protein [Rhodobacteraceae bacterium HTCC2083]
Length = 211
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 6/134 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D E GI V R G++ + + + L
Sbjct: 81 DGVEGYMTPHTNRQGIPVCRRGNVCGVMNSDQFFSTNSHHISRSGQQHL---MNFFRSSK 137
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
++ I HTDS + + N+ +S RA + + G R VRG+ + P+ +N
Sbjct: 138 ASAYIIAGHTDSRASDEYNMRLSYNRATTVANIARSAG---ARVADVRGYGERMPVASNK 194
Query: 168 TKVGRQNNQRIEIQ 181
++VG N+R+EI
Sbjct: 195 SQVGMSKNRRVEII 208
>gi|311748785|ref|ZP_07722570.1| putative OmpA family protein [Algoriphagus sp. PR1]
gi|311748788|ref|ZP_07722573.1| putative OmpA family protein [Algoriphagus sp. PR1]
gi|126577322|gb|EAZ81570.1| putative OmpA family protein [Algoriphagus sp. PR1]
gi|126577325|gb|EAZ81573.1| putative OmpA family protein [Algoriphagus sp. PR1]
Length = 805
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 5/138 (3%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ +E + + + IP + L L+ A +L + P+
Sbjct: 652 EIPEELKDKDFCDPEDLFTQIQDEIAQIPTIYFDFDKSMLRSVHKKELERTAIMLKRMPN 711
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND- 167
++ I+ HTD G N +S+ RAD +K+YL +RG+ R F P++
Sbjct: 712 LMLYIEGHTDQRGDDAYNQSLSERRADAVKAYLTKRGIEGERMEET-WFGETKPVNDCSE 770
Query: 168 ---TKVGRQNNQRIEIQI 182
T Q N+R E+++
Sbjct: 771 LDCTSAMHQLNRRTELRV 788
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ Y+ + + + + + P+L + ++N++ + + SHTDS + + N+ +S
Sbjct: 526 QLPVYVDIVYYDLDKYQIREDAKPVLDKLGELMNRYEFLDLLVGSHTDSRASDEYNITLS 585
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-----KVGRQNNQRIEIQI 182
RA+ + Y+ Q + + R I + F + ++ + Q N+R E+ +
Sbjct: 586 NNRAEAVTEYMAQYNIPAER-IRLEWFGEQQLVNDCGDGVPCPETDHQLNRRSELVL 641
>gi|86132280|ref|ZP_01050875.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85817199|gb|EAQ38382.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 287
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ D I ++ ++ + V F + + +L +AT++N P ++ H
Sbjct: 135 INDQDIEINVEKGVVFISLSDKVLFKSGSYQITSRAEEILGKVATVINSKPDFEALVEGH 194
Query: 117 TDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD++ + +N +S +RA I L++ G + + I+ G + P+ NDT +
Sbjct: 195 TDNVPYNRGVLIDNWDLSAKRATAIVRKLVELGANPAQLIAA-GRSEFVPLVPNDTPENK 253
Query: 173 QNNQRIEIQIFPR 185
N+R +I + P+
Sbjct: 254 STNRRTKIYVLPK 266
>gi|303249271|ref|ZP_07335504.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
gi|302489310|gb|EFL49266.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
Length = 264
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 5/129 (3%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+++G+ G M+ + L +L +A IL F + ++ D
Sbjct: 125 KNSGVSNDSSGVMMQVN-NSVMFRPGSAELTPTAQKVLDGVAKILRDFK-INLTVRGFAD 182
Query: 119 SI---GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
G + +S RA YL + S + G A P+ + + N
Sbjct: 183 DDEKGGPYPSKWELSAARAAAATRYLAETTGISTTRLRAVGLADSQPLVPPTSPANKARN 242
Query: 176 QRIEIQIFP 184
+RIE
Sbjct: 243 RRIEFFYTS 251
>gi|257095366|ref|YP_003169007.1| flagellar motor protein MotD [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257047890|gb|ACV37078.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 276
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 64/170 (37%), Gaps = 10/170 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ---MQLQDTGIVVSRIGDMITCYIP 77
K L + K+ + A++ + ++ + V +T I
Sbjct: 73 TPASVTKASLASKAQEAVKQKQREKMRNVAKEILEVMAPLIEQGKVRVLETSRGVTIEIN 132
Query: 78 VHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ F + L+ + + +Q +A +L I I+ HTD++ KN S
Sbjct: 133 DSILFSPGQAVLQPQLIKAMQSVAEVLVA-ADFPITIEGHTDNVPI-KNTQFPSNWELSA 190
Query: 137 IKSYLIQR----GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+++ + R + ++ G+A P++ N GR N+R+ I I
Sbjct: 191 VRATTVLRLFADAGIAAGRLTAIGYADTRPVEPNLLADGRARNRRVSILI 240
>gi|163789308|ref|ZP_02183749.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
gi|159875376|gb|EDP69439.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
Length = 680
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 10/121 (8%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
IP+ + + +Q + +LNK+P+ I I+SHTD G N +S
Sbjct: 550 ILDIPIIYFDFDKSNIRYDAEIEIQKVLAVLNKYPTMHIDIRSHTDCRGPASYNEKLSDR 609
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND---------TKVGRQNNQRIEIQIF 183
RA + YLI + + ++ +G+ ++ ++ Q N+R E I
Sbjct: 610 RAKSTRQYLIDK-GIAAERLTAKGYGESRLVNDCGCEPTNESSCSQEEHQLNRRSEFIIT 668
Query: 184 P 184
Sbjct: 669 S 669
>gi|313905138|ref|ZP_07838507.1| OmpA/MotB domain protein [Eubacterium cellulosolvens 6]
gi|313470041|gb|EFR65374.1| OmpA/MotB domain protein [Eubacterium cellulosolvens 6]
Length = 293
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 8/170 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S + + + + +SL + + + VSR D
Sbjct: 74 STSSVENIVAGESTMPENSVDDVNSLYIMFAQQMDAAGISDVQVSRGKDYTFIEFKNKAF 133
Query: 82 FV-SEVFLEKKFLPMLQLIATIL--NKFPSTVIAIQSHTDSIGTLKNN-----LLISQER 133
F L L + +L K + I I HT + + K + +++ R
Sbjct: 134 FEGDSSALTASGRQALDIFCAVLAPEKDQVSQINIMGHTAAAQSAKTDSIRGDRMLASMR 193
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + ++ ++ V + + PI N T+ GR N+R+EI +
Sbjct: 194 AAEVLVFIQEKNVIEPAKLVSMEYGEYRPIADNSTEEGRAANRRVEILLI 243
>gi|228964710|ref|ZP_04125817.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228794960|gb|EEM42459.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 223
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 53/136 (38%), Gaps = 9/136 (6%)
Query: 47 LDKAEDEFQMQLQDTGIV---VSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+D+ + + + + GI V R + + + + ++ + ++ +
Sbjct: 82 MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKGIISQLVGF 141
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
P+ I ++ HTDS N +S RA + +LI+ ++ ++ G+A
Sbjct: 142 FQSVPN-PIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYA 200
Query: 159 YKYPIDTNDTKVGRQN 174
PI ND+ +
Sbjct: 201 DTKPIVPNDSPQNWEK 216
>gi|325920257|ref|ZP_08182205.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
gi|325549250|gb|EGD20156.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
Length = 224
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 13/149 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + + I + + L+ + +L+ +A
Sbjct: 56 QVEAQRRKTLEQALAAPLAAGRVTL--VDGRIGIR-GNVLFAFNSDQLQPEGREVLKTLA 112
Query: 101 TILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L ++ ++ + TD +N +S +RA + LI GV ++
Sbjct: 113 APLKEYLSSREEILMVSGFTDDRPVLGGNRRYADNWELSAQRALTVTRALIAEGVPASSV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ F + P+D+N + R N+R+EI
Sbjct: 173 FAAA-FGSQQPVDSNADETRRAKNRRVEI 200
>gi|149915621|ref|ZP_01904147.1| peptidoglycan-associated lipoprotein [Roseobacter sp. AzwK-3b]
gi|149810513|gb|EDM70356.1| peptidoglycan-associated lipoprotein [Roseobacter sp. AzwK-3b]
Length = 171
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ V + L + +L A L I+ H D GT + NL + RA+
Sbjct: 61 DRVLFAVDQSTLSSEAQAVLDGQAQWLMTNIDYSAVIEGHADEQGTREYNLALGARRANA 120
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ YL+ R + + V + + PI+ + N+R I
Sbjct: 121 VQEYLVSR-GIAGNRLKVVSYGKERPIELCSNEACYAKNRRAVTVI 165
>gi|94311606|ref|YP_584816.1| OmpA/MotB [Cupriavidus metallidurans CH34]
gi|93355458|gb|ABF09547.1| peptidoglycan-associated outer membrane lipoprotein [Cupriavidus
metallidurans CH34]
Length = 169
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 50/164 (30%), Gaps = 15/164 (9%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + + + R + +D + D
Sbjct: 20 CSSGVKLDD-ASKSGAGTGATTDARNVAPVDVSRDPLNDP-------------NGPLAKR 65
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+++ + MLQ + L S I IQ +TD GT + NL + Q+RA+ +
Sbjct: 66 SVYFDFDSYSVKQDYQGMLQAHSQYLGSNKSRKILIQGNTDERGTSEYNLALGQKRAEAV 125
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + + + P T N+R +I
Sbjct: 126 RR-SLAAMGVPDSQMEAVSLGKEKPKATGHDDASWAENRRADIV 168
>gi|293390327|ref|ZP_06634661.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290950861|gb|EFE00980.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 356
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
Q + V++ + V+F ++ L+ + L I+ + + + I + +T
Sbjct: 220 QGSAPVIAPEVVNKVFNLNSDVTFAFNKANLKPQAQKTLDGISHEIAQVNNANIQVAGYT 279
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR--- 172
D IG+ N +SQ RA+ + +YL+ + S + IS G+ P+ N DT GR
Sbjct: 280 DRIGSDAYNQKLSQRRAETVANYLVSK-GVSQQAISATGYGKANPVTGNKCDTVKGRKAL 338
Query: 173 ----QNNQRIEIQI 182
+++R+EI +
Sbjct: 339 IACLADDRRVEIAV 352
>gi|163742214|ref|ZP_02149602.1| OmpA family protein [Phaeobacter gallaeciensis 2.10]
gi|161384544|gb|EDQ08925.1| OmpA family protein [Phaeobacter gallaeciensis 2.10]
Length = 211
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 66/177 (37%), Gaps = 18/177 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MIK L + T++ C + E + + G E +F +QL
Sbjct: 4 MIKYAAL-FGLSLTVAACEYEAGEPLDRSVFGNATNSNAAVMAG------ERDFAIQLA- 55
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+R + + I L+ +L A + +FP + HTD++
Sbjct: 56 -----TRFAEEVPTTIT---FAFDSAQLDGNAHAVLDQQAHWIRQFPEVRFRVFGHTDAV 107
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ N + RA +YL+ RG+S +R +V F P+ + R N+R
Sbjct: 108 GSASYNKALGLRRARAAVNYLVGRGISRSRLQAVVSFGETQPLIPTSDRERR--NRR 162
>gi|172062592|ref|YP_001810243.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171995109|gb|ACB66027.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 214
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 53/158 (33%), Gaps = 13/158 (8%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ E L + + I+ + ++ L+ +L+
Sbjct: 53 ARQQEAQQRKSLEQALAGPLAAGRVTLVNGRIGIS---GAVLFALNSDQLQPDGRDLLKT 109
Query: 99 IATILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSN 149
+A L + ++ I D +N +S +RA + LI
Sbjct: 110 LAGPLAAYLTTRDEILMISGFADDQQVRAGNRQFADNWELSAKRALTVTRALIDA-GVPA 168
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
R + F + P+ +N GR N+R+EI PR +
Sbjct: 169 RSVFAAAFGSEQPVSSNADDEGRAKNRRVEIAPVPRKS 206
>gi|288927607|ref|ZP_06421454.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108]
gi|288330441|gb|EFC69025.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108]
Length = 676
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 58/152 (38%), Gaps = 36/152 (23%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + + L + L + +LN+ P+ I + +H D GT + N ++SQ R
Sbjct: 506 VLIDNIFYDLDKYTLRPESKQALDELVKLLNENPNVTIELSAHCDYRGTPEYNKVLSQHR 565
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYP---------------------------IDTN 166
A+ + YLI + + ++ G+ + P +D +
Sbjct: 566 ANAVVQYLIDA-GIAPQRLTPVGYGKEKPKTIRKKLTERYKWLKEGDVLTEDFITKLDKD 624
Query: 167 DTKVGRQNNQRIEIQIFP--------RGNIKK 190
++ Q N+R E + +GN+KK
Sbjct: 625 KQEICNQLNRRTEFVVQRTTYGLLDDKGNLKK 656
>gi|171319197|ref|ZP_02908315.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171095577|gb|EDT40539.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 214
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 54/158 (34%), Gaps = 13/158 (8%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ E L + + I+ + ++ L+ + +L+
Sbjct: 53 ARQQEAQQRKSLEQALAGPLAAGRVTLVNGRIGIS---GAVLFALNSDQLQPEGRDLLKT 109
Query: 99 IATILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSN 149
+A L + ++ + D +N +S +RA + LI
Sbjct: 110 LAGPLAAYLTTRDEILMVSGFADDQQVRAGNRQFADNWELSAKRALTVTRALIDA-GVPA 168
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
R + F + P+ +N GR N+R+EI PR +
Sbjct: 169 RSVFAAAFGSEQPVSSNADDEGRAKNRRVEIAPVPRKS 206
>gi|27366879|ref|NP_762406.1| flagellar motor protein [Vibrio vulnificus CMCP6]
gi|27358446|gb|AAO07396.1|AE016809_158 Flagellar motor protein [Vibrio vulnificus CMCP6]
Length = 442
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 7/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ + +++ + V + D + + L P++ +A L
Sbjct: 290 NQIQRSLATEIEMVLLKVDALPDRVRITFQSNDLFESGSAELVAHIFPVVSKVARALEAT 349
Query: 107 PSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
I + HTD+ + N +S RA + L G S R I G P
Sbjct: 350 NG-KILVVGHTDNNPIFTSKFPSNWHLSLARATALTDRLASAGKLSGRVI-PEGMGDARP 407
Query: 163 IDTNDTKVGRQNNQRIEIQIF 183
+ +N+T GR N+R+EI +
Sbjct: 408 LVSNETAEGRSINRRVEIDLL 428
>gi|37676652|ref|NP_937048.1| hypothetical protein VVA0992 [Vibrio vulnificus YJ016]
gi|37201195|dbj|BAC97018.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
YJ016]
Length = 442
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 7/141 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ + +++ + V + D + + L P++ +A L
Sbjct: 290 NQIQRSLATEIEMGLLKVDALPDRVRITFQSNDLFESGSAELVAHIFPVVSKVARALEAT 349
Query: 107 PSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
I + HTD+ + N +S RA + L G S R I G P
Sbjct: 350 NG-KILVVGHTDNNPIFTSKFPSNWHLSLARATALTDRLASAGKLSGRVI-PEGMGDARP 407
Query: 163 IDTNDTKVGRQNNQRIEIQIF 183
+ +N+T GR N+R+EI +
Sbjct: 408 LVSNETVEGRSINRRVEIDLL 428
>gi|312132093|ref|YP_003999433.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311908639|gb|ADQ19080.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 165
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Query: 70 DMITCYIPVHVSFVSEVFL--EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + + + + + L L L + P + + HTD+ GT ++NL
Sbjct: 49 EKLLFEPLDIYFQSASLEIIRTPQLEEWLSLAKNYLEENPGERLVLTGHTDNEGTEESNL 108
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S ER + +K ++ S + V G PI NDT G Q N+R+ I++ R
Sbjct: 109 NLSLERGNRVKE-ILSAEGFSAESLEVEGKGQSEPIAGNDTPEGMQKNRRVSIRLLKR 165
>gi|110833095|ref|YP_691954.1| hypothetical protein ABO_0234 [Alcanivorax borkumensis SK2]
gi|110646206|emb|CAL15682.1| Flagellar motor protein [Alcanivorax borkumensis SK2]
Length = 213
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 11/147 (7%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILN---KFPS 108
+ L D + I V F + L+ + +L + L
Sbjct: 64 ALEEALADPLASGRVTFNNGRIGISGSVLFQLNSDRLQPEGKALLSDLVKPLQVFLSQHD 123
Query: 109 TVIAIQSH------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
++ + G +N +S +RA + LI++G+ +++ + F P
Sbjct: 124 DMLMVSGFTDALPINRGNGRYADNWGLSAQRALTVTRTLIEQGMPADQVFAAA-FGDNQP 182
Query: 163 IDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ ND R N+R+E+ PR + K
Sbjct: 183 VAPNDDADSRARNRRVELTTVPRQSEK 209
>gi|73920657|gb|AAZ94164.1| OpcL [Burkholderia sp. BC92]
Length = 139
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Query: 61 TGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + D ++ ++ P++Q A L P + IQ +TD
Sbjct: 21 AQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDE 80
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + NL + Q+RA+ ++ + GV+ ++ +V + P T + N+R +
Sbjct: 81 RGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRAD 139
>gi|145219967|ref|YP_001130676.1| OmpA/MotB domain-containing protein [Prosthecochloris vibrioformis
DSM 265]
gi|145206131|gb|ABP37174.1| OmpA/MotB domain protein [Chlorobium phaeovibrioides DSM 265]
Length = 167
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 23/183 (12%), Positives = 47/183 (25%), Gaps = 19/183 (10%)
Query: 2 IKELGLSMFIMTTI--SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K + + + +GC S +
Sbjct: 1 MKHTMKGLLALLLMITAGCSSKS-----------AVAPTDTADTYTPPAAPPAAVVSTPG 49
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G + G + L L+ A + + ++ H D
Sbjct: 50 GYGFDEYQTGP-----LGDVFYEFDSSELSADAEDQLKQNAAWMGANAAAATLVEGHCDE 104
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N+ + + RA K Y++ R I + + P + N+R
Sbjct: 105 RGTSEYNIALGERRAGNAKEYMV-RLGVPAASIETMSYGEEKPFAPGHDESAWSKNRRAH 163
Query: 180 IQI 182
+
Sbjct: 164 FVL 166
>gi|325279496|ref|YP_004252038.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
20712]
gi|324311305|gb|ADY31858.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
Length = 782
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 29/143 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
IP V++ L + L+ + TIL P+ I + +HTD +G + N ++S+ R
Sbjct: 537 IVIPNIYFDVAKWELRPEARQNLEELLTILEDNPNITIELSAHTDMVGNDEANRILSEHR 596
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV-----------------GR---- 172
A + YLI +GV +R + +G+ P N+ GR
Sbjct: 597 ARAVVDYLIGKGVYWDR-LEAKGYGETQPRQINEKDAREYPFFKVGEVLNERFFGRLRGE 655
Query: 173 ------QNNQRIEIQIFPRGNIK 189
Q N+RIE ++ R N K
Sbjct: 656 QRETALQLNRRIEFKVL-RTNYK 677
>gi|258624563|ref|ZP_05719502.1| outer membrane protein, putative [Vibrio mimicus VM603]
gi|262165799|ref|ZP_06033536.1| outer membrane protein [Vibrio mimicus VM223]
gi|262171367|ref|ZP_06039045.1| outer membrane protein [Vibrio mimicus MB-451]
gi|258583156|gb|EEW07966.1| outer membrane protein, putative [Vibrio mimicus VM603]
gi|261892443|gb|EEY38429.1| outer membrane protein [Vibrio mimicus MB-451]
gi|262025515|gb|EEY44183.1| outer membrane protein [Vibrio mimicus VM223]
Length = 212
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 77/204 (37%), Gaps = 19/204 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK L + + T + + + H+ ++ D + + +D+ + +
Sbjct: 3 IKSWALPLILFTV---SSSSFANQGEYLQHEGDEYDYRPTPLANQVADLKDDDNDGVINA 59
Query: 62 ---------GIVVSRIGDMITCYIPV-----HVSFVSEVFLEKKFLPMLQLIATILNKFP 107
G + G + +E FL ++ +A L +P
Sbjct: 60 RDLCPDTPRGSEIDNDGCGTFIKSSQMQQLHILFANDSSVIEPAFLTQIRQMAEFLQGYP 119
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
ST I +Q + +G + NL +S++R++ ++ LI R + +++ G+ + +
Sbjct: 120 STSIELQGYASKVGRAEYNLALSKQRSETVRDQLI-RYGVAPNRVNIVGYGDSVLVAEGE 178
Query: 168 TKVGRQNNQRIEIQIFP-RGNIKK 190
+ N+R+ + +G + K
Sbjct: 179 DDISHARNRRVTATVVGYKGEVVK 202
>gi|295700038|ref|YP_003607931.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295439251|gb|ADG18420.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 217
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 59/154 (38%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + I+ + ++ L+ + +L+ +A
Sbjct: 56 QAETQRRKTLEQALAGPLAAGRVTLVNGRIGIS---GNVLFALNSAQLQPEGRALLKSLA 112
Query: 101 TILNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRF 151
L+ + ++ + TD + +N +S +RA + LI G+ ++
Sbjct: 113 GPLSAYLRASDQILMVSGFTDDQRLREGNRRFADNWELSAQRALTVTRALIDEGLPASSV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+ +N + GR N+R+EI PR
Sbjct: 173 FAAA-FGSEQPVSSNADESGRAKNRRVEIAPVPR 205
>gi|225628282|ref|ZP_03786316.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254708420|ref|ZP_05170248.1| hypothetical protein BpinM_16075 [Brucella pinnipedialis
M163/99/10]
gi|254708727|ref|ZP_05170538.1| hypothetical protein BpinB_00411 [Brucella pinnipedialis B2/94]
gi|254714572|ref|ZP_05176383.1| hypothetical protein BcetM6_14787 [Brucella ceti M644/93/1]
gi|254717469|ref|ZP_05179280.1| hypothetical protein BcetM_13911 [Brucella ceti M13/05/1]
gi|256030252|ref|ZP_05443866.1| hypothetical protein BpinM2_06326 [Brucella pinnipedialis
M292/94/1]
gi|256160427|ref|ZP_05458116.1| hypothetical protein BcetM4_15574 [Brucella ceti M490/95/1]
gi|256255633|ref|ZP_05461169.1| hypothetical protein BcetB_15393 [Brucella ceti B1/94]
gi|260167927|ref|ZP_05754738.1| hypothetical protein BruF5_06077 [Brucella sp. F5/99]
gi|261219302|ref|ZP_05933583.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1]
gi|261222836|ref|ZP_05937117.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94]
gi|261315919|ref|ZP_05955116.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261316219|ref|ZP_05955416.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94]
gi|261322363|ref|ZP_05961560.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1]
gi|261757366|ref|ZP_06001075.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99]
gi|265987280|ref|ZP_06099837.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|265998795|ref|ZP_06111352.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1]
gi|225616128|gb|EEH13176.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|260921420|gb|EEX88073.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94]
gi|260924391|gb|EEX90959.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1]
gi|261295053|gb|EEX98549.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1]
gi|261295442|gb|EEX98938.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94]
gi|261304945|gb|EEY08442.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261737350|gb|EEY25346.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99]
gi|262553484|gb|EEZ09253.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1]
gi|264659477|gb|EEZ29738.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M292/94/1]
Length = 343
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---T 109
++ + +GD + + K ++ +A + + P
Sbjct: 205 EILSDKENIRIVGDRFVFQ-SEVLFPTGSAEINPKGQVEMKKLANAIIQLNREIPDDINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI GV +NR ++ GF P+D
Sbjct: 264 VLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGEYQPLD 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
T +T R N+RIE+++ R
Sbjct: 323 TANTADARARNRRIELKLTER 343
>gi|302184719|ref|ZP_07261392.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
Length = 300
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L + L P+ I + H+D+ G N +S+
Sbjct: 171 IKQAEVGFPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + Y + + I++R +YP+ N + R N+R+ + +
Sbjct: 231 RALAVMDYFKAQ-GIPEQQITLRFHGERYPLAPNTNEANRARNRRVSVHL 279
>gi|294678953|ref|YP_003579568.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
1003]
gi|294477773|gb|ADE87161.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
Length = 311
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 60/163 (36%), Gaps = 12/163 (7%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
+ + D+ + + + L+ G + V
Sbjct: 159 TAEDATPVTPGNDLAAPQPSPEPESPAADLAKALERAG----------KVALDDLVFASG 208
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L + L +A L P IA+ HTD+ G L N+ +S++RA ++ LI++
Sbjct: 209 ASQLAEGDFASLSALADYLATRPEARIALVGHTDNSGALAANIALSRDRAAAVRKRLIEK 268
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI--FPR 185
+S G + P +N T GR N+R+E + PR
Sbjct: 269 LGVPAGQLSAEGAGWLSPRSSNLTPEGRDKNRRVEAVLASTPR 311
>gi|294624615|ref|ZP_06703288.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294665275|ref|ZP_06730569.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292601088|gb|EFF45152.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292604952|gb|EFF48309.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 223
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 13/149 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + + I + + L+ + +L+ +A
Sbjct: 56 QAEAQRRQTLEQALAAPLAAGRVTL--VDGRIGIR-GNVLFAFNSDELQPEGREVLKSLA 112
Query: 101 TILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
T L ++ ++ + TD +N +S +RA + LI GV ++
Sbjct: 113 TPLTQYLRARDEILMVSGFTDDRPVLGGNRRYADNWELSAQRALTVTRALIAEGVPASSV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ F + P+D+N + R N+R+EI
Sbjct: 173 FAAA-FGSQQPVDSNADEARRAKNRRVEI 200
>gi|149920362|ref|ZP_01908832.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149818804|gb|EDM78246.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 225
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL---LISQERADV 136
++ L + LP+L+ +A +L +P + IQ+H D++ ++ +Q +A+
Sbjct: 103 FEHRTKATLARDSLPLLESVAAVLVAYPELELEIQAHEDTVTADQHRYMSARPTQRQAEA 162
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +LIQ+GV++ R I RG+ PIDTN+TK GR++N+R+++
Sbjct: 163 VADFLIQKGVAAER-IQARGYGEDRPIDTNETKEGRRHNRRVDLVFT 208
>gi|254488141|ref|ZP_05101346.1| peptidoglycan-associated lipoprotein [Roseobacter sp. GAI101]
gi|214045010|gb|EEB85648.1| peptidoglycan-associated lipoprotein [Roseobacter sp. GAI101]
Length = 171
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 59/177 (33%), Gaps = 18/177 (10%)
Query: 2 IKELGLSMFIMTTISGCGLASREK-KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ + S ++ ++ + ++ ++ GS+ D + + Q
Sbjct: 1 MNRILTSTLLIAALAVSACTNPDRFGADGMNGGGTMAPGGMIPGSANDPSSTAYFQQAVG 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + V++ L L AT L I+ H D
Sbjct: 61 DRV----------------LFEVNQSNLTPAGQATLDGQATWLITNIDYQAIIEGHADEQ 104
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + RA+ + YLI R + + V + + PI+ + N+R
Sbjct: 105 GTREYNVALGARRANAAREYLISR-GVAGNRLRVVSYGKERPIEVCSAEACYAKNRR 160
>gi|296126315|ref|YP_003633567.1| outer membrane protein [Brachyspira murdochii DSM 12563]
gi|296018131|gb|ADG71368.1| outer membrane protein [Brachyspira murdochii DSM 12563]
Length = 205
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 63/196 (32%), Gaps = 12/196 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + + I +I+ C A T+ N+ + +
Sbjct: 1 MKKIILIMSLIFISIAACKSAPVATGPEEGSGFKTTEANNQNAKGYTLPDGAAVKETPRG 60
Query: 61 TGIVVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+V+ + + L+ I+ P+ I ++
Sbjct: 61 KVLVLHDPKSKTDIGKSGNASYEVKFGFDNTVEIGSYKEAYNLVYQIIKNNPNIRIMVEG 120
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
++ G N +SQ RAD +Y+I+ G ++R + F P + N
Sbjct: 121 NSSKEGPAPYNYQLSQRRADTSFNYIIKLGSENSRLLK-NAFGEALPEYPTLKE-----N 174
Query: 176 QRIE-IQIFPRGNIKK 190
+R E I I ++KK
Sbjct: 175 RRCEFIIIMDEDDLKK 190
>gi|156975609|ref|YP_001446516.1| hypothetical protein VIBHAR_03342 [Vibrio harveyi ATCC BAA-1116]
gi|156527203|gb|ABU72289.1| hypothetical protein VIBHAR_03342 [Vibrio harveyi ATCC BAA-1116]
Length = 230
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 2/107 (1%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I L +L +A L + + ++ HTD IGT N + RA
Sbjct: 114 IARVHFAFDRFNLTPLARDVLSSVARQLAQT-DYQVTVEGHTDWIGTKAYNQTLGHNRAK 172
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ S + +++ F PI TN+T GR N+R ++ I
Sbjct: 173 STARE-LHYYGVSEQKTTLKSFGESEPIATNNTSSGRSKNRRADVYI 218
>gi|157960752|ref|YP_001500786.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157845752|gb|ABV86251.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 356
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 3/133 (2%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + L + I V+ + + L L + LN+ P+
Sbjct: 216 QVKEKPITLPEKVIPVTAKPVVFPALTVTSLFDFDSSELTNS--DSLTAVIERLNQVPTA 273
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ I+ +TDS G N +S+ RA + LI I V GF ++P+ NDT
Sbjct: 274 IANIKGYTDSTGAAAYNQALSERRAQAVADDLIAA-GIKPEQIEVHGFGEQFPVMKNDTS 332
Query: 170 VGRQNNQRIEIQI 182
R N+R+ I I
Sbjct: 333 EHRHENRRVLIHI 345
>gi|86134634|ref|ZP_01053216.1| OmpA family protein [Polaribacter sp. MED152]
gi|85821497|gb|EAQ42644.1| OmpA family protein [Polaribacter sp. MED152]
Length = 527
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
D + IP +++ ++K LQ++ ++N++P ++ I++H+DS G NL +
Sbjct: 403 DQVMLNIPPIYFDLAKATIKKTSEQELQMVVDLMNRYPKIIVQIRAHSDSRGNDSYNLRL 462
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFP 184
S RA ++++ +G++ NR + GF + ++ ++ N+R E I
Sbjct: 463 SDRRAKATVNWILDKGIAKNRIFGI-GFGEEDLVNECSNGVQCSEEKHLENRRTEFVILN 521
>gi|289662480|ref|ZP_06484061.1| hypothetical protein XcampvN_05177 [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289669716|ref|ZP_06490791.1| hypothetical protein XcampmN_14767 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 224
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 13/149 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + + I + + L+ + +L+ +A
Sbjct: 56 QAEAQRRQTLEQALAAPLAAGRVTL--VDGRIGIR-GNVLFAFNSDELQPEGREVLKSLA 112
Query: 101 TILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L ++ ++ + TD +N +S +RA + LI GV ++
Sbjct: 113 APLAQYLRAREEILMVSGFTDDRPVLGGNRRYADNWELSAQRALTVTRALIAEGVPASSV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ F + P+D+N + R N+R+EI
Sbjct: 173 FAAA-FGSQQPVDSNADEARRAKNRRVEI 200
>gi|116332026|ref|YP_801744.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116125715|gb|ABJ76986.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 224
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 51/144 (35%), Gaps = 5/144 (3%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL 103
+ F+ + + + I + + + F FL + ++ + T+L
Sbjct: 66 QEYKRLIATFRSLIDAGKLKIKIIDGRMVVVLSSDILFPVGSAFLSSAGIASIREVTTLL 125
Query: 104 NKFPSTVIAIQSHTDSIG---TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
I+ HTD N ++ RA + +I+ G+ R IS
Sbjct: 126 ASLGGKRFQIEGHTDDTPTGIKGYTNWELASSRALNVLHTMIKAGMPEER-ISAASMGAS 184
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFP 184
P N + R N+RIEI I P
Sbjct: 185 RPALPNTSPENRSANRRIEIVIVP 208
>gi|88810551|ref|ZP_01125808.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
gi|88792181|gb|EAR23291.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
Length = 147
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
V ++ +++P+L+ L+ P + I+ HTD G+ +
Sbjct: 30 ELQDPASPLAKRVIYFDFDSNVVKSEYMPILKAHGEYLSTHPENQVTIEGHTDERGSREY 89
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL + + RA ++ +++ ++ IS + + P+D T+ N+R I
Sbjct: 90 NLALGERRAKAVQR-ILELNGAAKEQISTVSYGEEKPLDPGHTEAALTKNRRALIV 144
>gi|229588858|ref|YP_002870977.1| hypothetical protein PFLU1327 [Pseudomonas fluorescens SBW25]
gi|229360724|emb|CAY47582.1| putative outer membrane protein [Pseudomonas fluorescens SBW25]
Length = 381
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 3/169 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S+ K + +N K + LD E + ++D+ + + R +++ PV S
Sbjct: 136 SKPKPLAKVDVTNVPMPDPKITQAWLDDYEPRLRAAIKDSNLQLERRDNVLVVIAPVDGS 195
Query: 82 FVSE--VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L L +A + P T + + H D+ GT + +++ERA I S
Sbjct: 196 YNPKRPAMLLPVTLGPFTRVAKAVEADPKTAVLVLGHVDATGTAPASQALTKERAQSIAS 255
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
G+ +R + +RG P ND+ GR N+R+EI R +
Sbjct: 256 IFSLSGLKQDRLM-LRGMGDLMPRAANDSNQGRALNRRMEIMFTQRTTM 303
>gi|332520148|ref|ZP_08396612.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332044707|gb|EGI80901.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 636
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 10/152 (6%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
G +++ E + + I V + + + K L +
Sbjct: 492 AIAGDDVEEVAVELALDPIEKIIEVEE------VVLRPIYFDYDKSNITAKAAFELDNLV 545
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
++NK+P VI SHTD + K N +S RA Y+I +G+ + R IS G +
Sbjct: 546 QVMNKYPDMVIYATSHTDIRASNKYNDALSDRRAKTTVQYIISKGIDATR-ISGAGKGER 604
Query: 161 YPIDT---NDTKVGRQNNQRIEIQIFPRGNIK 189
N T+ Q N+R E +I G K
Sbjct: 605 ELAVDCGTNCTEEQHQLNRRSEFKILSGGPKK 636
>gi|269968606|ref|ZP_06182608.1| hypothetical protein VMC_40380 [Vibrio alginolyticus 40B]
gi|269826817|gb|EEZ81149.1| hypothetical protein VMC_40380 [Vibrio alginolyticus 40B]
Length = 288
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 57/152 (37%), Gaps = 12/152 (7%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + L T + + + + V + K++
Sbjct: 122 LNQLEQQLDYVLSQTTCTPPDDIEALRSDLNIVSDIYALLNIDNQFAVDSAEINPKYMGH 181
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L A IL P+ + + H D+ GT N ++Q RA+ +K + ++ ++ +
Sbjct: 182 LAEAAYILRDHPNLSLVVTGHADATGTPDYNQKLAQARAEQVKR-YLTVFGITSERVTTK 240
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
P+ +T R N+R+ I++ +
Sbjct: 241 SVGDNLPLYEGETPAVRLTNRRVSIEVISPNS 272
>gi|114047938|ref|YP_738488.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113889380|gb|ABI43431.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 290
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V L + L I L+ P + + ++TDS G N +S +
Sbjct: 177 IAFTVLNYDEGGTDLTRFSQQQLSRIQEYLSYDPDVELVLVDAYTDSYGGRSVNQKVSDK 236
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ +K + + G+ +R ++V G + + +ND R N+R+ I+I
Sbjct: 237 RAESVKDFFVASGIPQDRIVTV-GHGERRHVASNDDIEERALNRRVVIRI 285
>gi|269964049|ref|ZP_06178354.1| outer membrane protein, putative [Vibrio harveyi 1DA3]
gi|269831190|gb|EEZ85344.1| outer membrane protein, putative [Vibrio harveyi 1DA3]
Length = 206
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 50/133 (37%), Gaps = 7/133 (5%)
Query: 64 VVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ G + + F ++ ++ LN++PST I + +
Sbjct: 62 EIDNDGCGEYIKSSEQMQVRVLFANDSDEINPVFHRQIRQLSEFLNEYPSTSIELHGYAS 121
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+G +NL +S+ RA+ + + + + + G+ + +V N+R+
Sbjct: 122 KVGGSTHNLDLSKRRANNV-RSALLGYGIAANRVRIVGYGDTHLAQQGTDEVSHALNRRV 180
Query: 179 EIQIFP-RGNIKK 190
+ +G IKK
Sbjct: 181 TASVVGYKGEIKK 193
>gi|209520168|ref|ZP_03268940.1| OmpA/MotB domain protein [Burkholderia sp. H160]
gi|209499375|gb|EDZ99458.1| OmpA/MotB domain protein [Burkholderia sp. H160]
Length = 116
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
L L + + I +TDS G+ +N +S+
Sbjct: 1 MLLQGDANFATDSAILSSAAKASLDQFLRVNEGINFRRVTIIGYTDSTGSRGHNQKLSEA 60
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
RA + YL + G A P+ +N T GR N+R+E+++ G++
Sbjct: 61 RAQSVLRYLRD-HGLIAQSFVAEGAAADDPVASNATAEGRALNRRVEVRVVASGSV 115
>gi|148975972|ref|ZP_01812761.1| Conserved hypothetical outer membrane protein [Vibrionales
bacterium SWAT-3]
gi|145964717|gb|EDK29970.1| Conserved hypothetical outer membrane protein [Vibrionales
bacterium SWAT-3]
Length = 211
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 70/203 (34%), Gaps = 25/203 (12%)
Query: 2 IKELGLSMFIMTTI-------------SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD 48
+K+L + +++T+ C A E + ++ ++
Sbjct: 1 MKKLMIGSIVLSTLQFSLHANAEDGISVYCDTAFSEYQHSVRVDDVVGVAQHRLGALQIE 60
Query: 49 KAED--EFQMQLQ-DTGIVVSRIGDMITCYIPVHV-------SFVSEVFLEKKFLPMLQL 98
+ D E + L + + +++ G + L L
Sbjct: 61 QQSDSNELKQALARQSSLGINKTGCKTWISSQDRHGLLARIHFAFDQHSLTPMGSKALSQ 120
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A+ L + + + + HTDS G N + +RA LI + +R F
Sbjct: 121 LASEL-QTSGSSVTVDGHTDSSGDEGYNQALGMQRALTTSDALIV-DGVDKHHLVIRSFG 178
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQ 181
PI +N+T GR NN+R EI
Sbjct: 179 ESKPIASNETVEGRANNRRAEIW 201
>gi|332519351|ref|ZP_08395818.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045199|gb|EGI81392.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 636
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 10/152 (6%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
G +++ E + + I V + + + K L +
Sbjct: 492 AIAGDDVEEVAVELALDPIEKIIEVEE------VVLRPIYFDYDKSNITAKAAFELDNLV 545
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
++NK+P VI SHTD + K N +S RA Y+I +G+ + R IS G +
Sbjct: 546 QVMNKYPDMVIYATSHTDIRASNKYNDALSDRRAKTTVQYIISKGIDATR-ISGAGKGER 604
Query: 161 YPIDT---NDTKVGRQNNQRIEIQIFPRGNIK 189
N T+ Q N+R E +I G K
Sbjct: 605 ELAVDCGTNCTEEQHQLNRRSEFKILSGGPKK 636
>gi|254439344|ref|ZP_05052838.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198254790|gb|EDY79104.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 637
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 66/192 (34%), Gaps = 13/192 (6%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ-------- 55
+ + ++ +S + V + + ++K + +
Sbjct: 411 RVLAGIAALSQLSNGSVVVEPADIVVRGNTGSPAASGEIIRLLIEKLGEAEEFEVSVTYV 470
Query: 56 ---MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM-LQLIATILNKFPSTVI 111
+ +G ++ + F L I IL + I
Sbjct: 471 EELDPIAALPTTEECLGQIMNVTESRKIRFEPSSATIAGAGAAILDDIKEILQRCADLRI 530
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I +TDS G+ N +SQ+RAD + L R V F SV G+ PI N+T G
Sbjct: 531 EIAGYTDSQGSEDGNQRLSQQRADAVLEGLRVRRVPVASFRSV-GYGEADPIADNETADG 589
Query: 172 RQNNQRIEIQIF 183
R+ N+RIE +
Sbjct: 590 REANRRIEFSLI 601
>gi|33519799|ref|NP_878631.1| peptidoglycan-associated lipoprotein precursor [Candidatus
Blochmannia floridanus]
gi|33504144|emb|CAD83406.1| peptidoglycan-associated lipoprotein precursor [Candidatus
Blochmannia floridanus]
Length = 174
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
L+D I +S+ + + + F + + F +L L A L P I I
Sbjct: 47 SDNLKDNDIPISKTNHIQNLKLKNTIYFSLDQYCVLPIFFEILDLHADFLCNNPLYKIII 106
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ HTD GT + N+ + + RA +K YL +GV SN+ +V + + PI +
Sbjct: 107 EGHTDERGTPEYNIGLGERRAYAVKKYLQSKGVLSNQIDTVS-YGKEKPIAFGQNEESYS 165
Query: 174 NNQRIEIQ 181
N+R+ +
Sbjct: 166 KNRRVVLL 173
>gi|86751586|ref|YP_488082.1| hypothetical protein RPB_4488 [Rhodopseudomonas palustris HaA2]
gi|86574614|gb|ABD09171.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 341
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 13/159 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + + + +GD + L + L
Sbjct: 186 AQRVQELSRYRSEFFGRLR-AILGDRPDIRIVGDRFVFQ-SEVFFDTGQALLLPEGRAEL 243
Query: 97 QLIATIL----NKFPS---TVIAIQSHTDSI---GTLKNNLLISQERADVIKSYLIQRGV 146
+A L K PS V+ + HTD G K+N +S RA + YL+ GV
Sbjct: 244 DKLAAALTELDKKIPSEIPWVLRVDGHTDRRPITGVFKSNWELSSARAISVVQYLVSLGV 303
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ R ++ GFA P+DT +T + N+RIE+++ R
Sbjct: 304 PAQRLVAA-GFAEFQPLDTANTDEAYRRNRRIELKLTER 341
>gi|59711533|ref|YP_204309.1| flagellar motor protein MotY [Vibrio fischeri ES114]
gi|59479634|gb|AAW85421.1| flagellar motor protein MotY [Vibrio fischeri ES114]
Length = 292
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ + L K L IA + ++ + ++TDS G N +S+
Sbjct: 179 ISFTILHFDKNSDELNKASKKRLSQIADFIKYTKDVDLVLVATYTDSSGGKNVNQQVSER 238
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA +++Y + I V + + PI N T +G+ N+R+ I +
Sbjct: 239 RALKLQNYF-ESIGLPADRIRVHSYGERRPIADNATPIGKNKNRRVVISL 287
>gi|109897724|ref|YP_660979.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
gi|109700005|gb|ABG39925.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
Length = 287
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L K L +I L + + + ++DS G N +S RA IK+
Sbjct: 183 YQKNSTELTKYSQRRLNMIGQYLKEDSDMELVLLDGYSDSYGGRDMNKTLSVSRAVEIKN 242
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
Y + + I V G + I N ++ R N+R+ I+
Sbjct: 243 YF-SDMGVAPQRIEVTGHGERRHIAPNTNEMSRAKNRRVVIR 283
>gi|163788219|ref|ZP_02182665.1| putative flagellar motor protein MotB [Flavobacteriales bacterium
ALC-1]
gi|159876539|gb|EDP70597.1| putative flagellar motor protein MotB [Flavobacteriales bacterium
ALC-1]
Length = 285
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 6/133 (4%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ D+ I ++ ++ I + F + + +L +A ++N P ++SH
Sbjct: 135 INDSDIEINVEKGVVFISIADKLLFKSGSYNVTDRANEILGKVAKVINSKPDFEAMVESH 194
Query: 117 T----DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
T S L +N +S +RA I L V+ + I+ G + P+ NDT R
Sbjct: 195 TDNKSYSKPPLLDNWDLSVKRATAIVRVLESLNVNPQQLIAA-GRSSYVPLVENDTAENR 253
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 254 AKNRRTRIVVLPK 266
>gi|88811500|ref|ZP_01126755.1| hypothetical protein NB231_12214 [Nitrococcus mobilis Nb-231]
gi|88791389|gb|EAR22501.1| hypothetical protein NB231_12214 [Nitrococcus mobilis Nb-231]
Length = 435
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 56/167 (33%), Gaps = 12/167 (7%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+A + K +S V + + V ++ +
Sbjct: 268 MAQLNEIKQATFESPIGPSVVGGP-----QLPELLAGAFPGRLQVETKEDGTTQLTLLGE 322
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERAD 135
V L + P+L +A L + P + + HTD + K+N +S++RA
Sbjct: 323 VFRSGSAELSAAYAPVLDKVAGALKQVPG-RVLVVGHTDDVPIRSLRFKDNYELSRQRAL 381
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQRIEIQ 181
L +R R +S G P DT R N+RIEI
Sbjct: 382 NAAERLKERLDDPGR-VSYLGVGPDQPRYRPVDTPENRARNRRIEII 427
>gi|261868250|ref|YP_003256172.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261413582|gb|ACX82953.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 356
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 10/122 (8%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + ++ L+ + L I+ + + + + + +TD IG+ N +
Sbjct: 232 NKVFNLNSDVTFAFNKANLKPQAQKTLDGISHEIAQVNNANVQVAGYTDRIGSDAYNQKL 291
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR-------QNNQRIEI 180
SQ RA+ + +YL+ + S + IS G+ P+ N DT GR +++R+EI
Sbjct: 292 SQRRAETVANYLVSK-GVSQQAISATGYGKANPVTGNKCDTVKGRKALIACLADDRRVEI 350
Query: 181 QI 182
+
Sbjct: 351 AV 352
>gi|153008534|ref|YP_001369749.1| hypothetical protein Oant_1203 [Ochrobactrum anthropi ATCC 49188]
gi|151560422|gb|ABS13920.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 343
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------ST 109
++ + +GD + + ++ +A + + +
Sbjct: 205 EILSDKENIRIVGDRFVFQ-SEVLFPTGSADINPAGQDEMKKLADAVIQLNQEIPDDINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI GV +NR ++ GF P+D
Sbjct: 264 VLRVDGHTDNVPLTGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGEYQPLD 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
+DT R N+RIE+++ R
Sbjct: 323 ASDTADARSKNRRIELKLTER 343
>gi|85705152|ref|ZP_01036252.1| OmpA family protein [Roseovarius sp. 217]
gi|85670474|gb|EAQ25335.1| OmpA family protein [Roseovarius sp. 217]
Length = 219
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 14/179 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + + I+ A +++ + + FG E L T
Sbjct: 1 MKH---VLALAGLIAASACAPQDEVYRSYFNEAGAHVDSGHFG------EAVMNNHLVMT 51
Query: 62 G---IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G + + + L+ L+ A + +FP + HTD
Sbjct: 52 GERSYTYDLANRFASEVLSTVNFAFNSAELDTGARDTLREQARWIRQFPEVRFRVYGHTD 111
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
++G+ N + RA + ++L +G+S R +V F P+ D + R N+R
Sbjct: 112 AVGSDSYNKTLGMRRAQAVVAFLSSQGISRARLEAVASFGETQPLIVTDGRERR--NRR 168
>gi|197335579|ref|YP_002155689.1| sodium-type flagellar protein MotY [Vibrio fischeri MJ11]
gi|197317069|gb|ACH66516.1| sodium-type flagellar protein MotY [Vibrio fischeri MJ11]
Length = 292
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ + L K L IA + ++ + ++TDS G N +S+
Sbjct: 179 ISFTILHFDKNSDELNKASKKRLSQIADFIKYTKDVDLVLVATYTDSSGGKNVNQQVSER 238
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA +++Y + I V + + PI N T +G+ N+R+ I +
Sbjct: 239 RALKLQNYF-ESIGLPADRIRVHSYGERRPIADNATPIGKNKNRRVVISL 287
>gi|149178577|ref|ZP_01857164.1| OmpA/MotB [Planctomyces maris DSM 8797]
gi|148842595|gb|EDL56971.1| OmpA/MotB [Planctomyces maris DSM 8797]
Length = 278
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 50/160 (31%), Gaps = 12/160 (7%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQL 98
K S LD +L D + F S L+ +L
Sbjct: 108 AKGQPSPLDGEATRRFQELADKYPDFEFDPITGVSKFHSDILFSSGSDNLKPAAQEILNQ 167
Query: 99 IATILNK--FPSTVIAIQSHTDSIG--------TLKNNLLISQERADVIKSYLIQRGVSS 148
A I+N + + HTD + N +S RA+ + + +
Sbjct: 168 FAAIMNDGNAKRLNVLVVGHTDDKPISKASTQRQHRTNWHLSTNRANSVV-LTLSKFGVK 226
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ G++ P+ N RQ N+R+EI + +
Sbjct: 227 QERMGAAGYSMFQPVVPNQNDSARQKNRRVEIFVLAPDAV 266
>gi|329849877|ref|ZP_08264723.1| ompA family protein [Asticcacaulis biprosthecum C19]
gi|328841788|gb|EGF91358.1| ompA family protein [Asticcacaulis biprosthecum C19]
Length = 254
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
L +L I + P + ++++ +TD++G +N+ +S RA+
Sbjct: 144 FISGSAELTGDSQAILIDIYNTIQTCPQNLALSVEGYTDNVGQDNDNMKLSTARAEAAAF 203
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
LI + +S RG+ + PI N ++ GR N+R++ + PR
Sbjct: 204 ALIDL-GLAQASVSSRGYGAQNPIADNTSEDGRARNRRVDFILRPRDE 250
>gi|225552144|ref|ZP_03773084.1| outer membrane protein [Borrelia sp. SV1]
gi|225371142|gb|EEH00572.1| outer membrane protein [Borrelia sp. SV1]
Length = 381
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I V + I + S L+K++ + LIA +L KF I I+ HT+
Sbjct: 259 KAIEVEKNNKGINLSFDIEFYPNSFQILQKEYKKI-DLIAKLLEKFKKNNILIEGHTEQF 317
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + +S++RA I +YLI+ V I +G+ + P + + + N+R+EI
Sbjct: 318 GLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEI 376
Query: 181 QIFPR 185
I
Sbjct: 377 TILNN 381
>gi|218249525|ref|YP_002374694.1| outer membrane protein [Borrelia burgdorferi ZS7]
gi|221217420|ref|ZP_03588891.1| outer membrane protein [Borrelia burgdorferi 72a]
gi|224533995|ref|ZP_03674579.1| outer membrane protein [Borrelia burgdorferi CA-11.2a]
gi|225549874|ref|ZP_03770836.1| outer membrane protein [Borrelia burgdorferi 118a]
gi|226321923|ref|ZP_03797448.1| outer membrane protein [Borrelia burgdorferi Bol26]
gi|218164713|gb|ACK74774.1| outer membrane protein [Borrelia burgdorferi ZS7]
gi|221192698|gb|EEE18914.1| outer membrane protein [Borrelia burgdorferi 72a]
gi|224512831|gb|EEF83198.1| outer membrane protein [Borrelia burgdorferi CA-11.2a]
gi|225369565|gb|EEG99016.1| outer membrane protein [Borrelia burgdorferi 118a]
gi|226232513|gb|EEH31267.1| outer membrane protein [Borrelia burgdorferi Bol26]
Length = 381
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I V + I + S L+K++ + LIA +L KF I I+ HT+
Sbjct: 259 KAIEVEKNNKGINLSFDIEFYPNSFQILQKEYKKI-DLIAKLLEKFKKNNILIEGHTEQF 317
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + +S++RA I +YLI+ V I +G+ + P + + + N+R+EI
Sbjct: 318 GLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEI 376
Query: 181 QIFPR 185
I
Sbjct: 377 TILNN 381
>gi|254462893|ref|ZP_05076309.1| OmpA family protein [Rhodobacterales bacterium HTCC2083]
gi|206679482|gb|EDZ43969.1| OmpA family protein [Rhodobacteraceae bacterium HTCC2083]
Length = 219
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 62/173 (35%), Gaps = 9/173 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L + +S C + + + + FG++ + Q +
Sbjct: 11 ALIVSSAALLSACSS--GDPVYSSFGTEAGSLLNSGTFGNATMNNTQIMSGEKQYAYDLS 68
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+R + + + L+ L+ A + +FP + H D++G +
Sbjct: 69 ARFANEVLTTVN---FAFGSAQLDAGAHDTLREQAAWIRQFPEVRFRVYGHADAVGGNAS 125
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ-NNQR 177
N + +RA + ++L G+ +R +V F + P+ GR+ N+R
Sbjct: 126 NKSLGLQRAYAVVNFLAANGIGKSRLEAVSSFGEEQPLIV---SEGRERRNRR 175
>gi|114327771|ref|YP_744928.1| peptidoglycan-associated lipoprotein [Granulibacter bethesdensis
CGDNIH1]
gi|114315945|gb|ABI62005.1| peptidoglycan-associated lipoprotein [Granulibacter bethesdensis
CGDNIH1]
Length = 196
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 1/134 (0%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
GS + TG+V D++ ++ L L +
Sbjct: 57 SGSDQSANQGGAGASTTATGVVPGSQEDLVQNVGDRVFYAFNQSSLSTDAQGTLDRQSAW 116
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
L K+P + + + D GT + NL + Q RA+ + +L+ + ++ I+ + P
Sbjct: 117 LQKYPQVSVQVAGNCDDRGTEEYNLALGQRRANAARDFLVAK-GVASSRITTISYGKDRP 175
Query: 163 IDTNDTKVGRQNNQ 176
D + N+
Sbjct: 176 TAVGDDEQAWAQNR 189
>gi|289676756|ref|ZP_06497646.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
gi|330898576|gb|EGH29995.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
gi|330981564|gb|EGH79667.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 300
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L + L P+ I + H+D+ G N +S+
Sbjct: 171 IKQAEVGFPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + Y + + I++R +YP+ N + R N+R+ + +
Sbjct: 231 RALAVMDYFKAQ-GIPEQQITLRFHGERYPLAPNTNEANRARNRRVNVHL 279
>gi|110636551|ref|YP_676758.1| outer membrane peptidoglycan-associated lipoprotein [Cytophaga
hutchinsonii ATCC 33406]
gi|110279232|gb|ABG57418.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Cytophaga hutchinsonii ATCC 33406]
Length = 656
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V + + + + + L + ++N P I + SHTD G+
Sbjct: 523 AEVMLVKKERIVIVRNILYDYDKWDIRPDAAVELDTMVMLMNANPEIQIELGSHTDERGS 582
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-TKVGRQNNQRIEIQ 181
+ N +++Q+RA Y+I G+S +R I +G+ P N T+ Q N+R +
Sbjct: 583 AEYNRVLAQKRAQAAVDYIIAHGISKDRII-AKGYGEDEPAIRNAKTEADHQTNRRTTFK 641
Query: 182 IFP 184
+
Sbjct: 642 VLN 644
>gi|240137207|ref|YP_002961676.1| Chemotaxis protein MotB [Methylobacterium extorquens AM1]
gi|240007173|gb|ACS38399.1| Chemotaxis protein MotB [Methylobacterium extorquens AM1]
Length = 468
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 10/145 (6%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLPMLQLIA 100
+ + +A + V R G+ + I + + K + L+ IA
Sbjct: 322 AEIARAVPSLPNGAPAPQVEVRRTGEGVLISITDEINYSMFGIGSAEPTPKVVKALERIA 381
Query: 101 TILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
ILN P + ++ HTD +N +S RA + L++ G+ R + G+
Sbjct: 382 KILNSRPG-RVVVRGHTDGRPFRSETYDNWRLSSARAQMASYMLVRGGLDEARIDRIEGY 440
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
A + P N+ K N+RIEI +
Sbjct: 441 ADRQPRIANNPKA--AENRRIEILL 463
>gi|86137994|ref|ZP_01056570.1| OmpA family protein [Roseobacter sp. MED193]
gi|85825586|gb|EAQ45785.1| OmpA family protein [Roseobacter sp. MED193]
Length = 213
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 62/180 (34%), Gaps = 23/180 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLAS-REKKKVFLHKSNDT--DIVNKRFGSSLDKAEDEFQMQ 57
MIK + + +++ + C E L + V + G + F +
Sbjct: 5 MIKSVAILGLVLSA-TACSHNQAGEPLDSSLMGAATANNAAVMRGEGEYAIQLAARFAEE 63
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ T ++ L+ + +L A + +FP + HT
Sbjct: 64 VPTT-----------------INFAFNDARLDGEARAVLDRQAAWIKQFPEVRFRVYGHT 106
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D++G N + RA ++L+ RG+ R ++ P+ T+ + N+R
Sbjct: 107 DAVGGNSYNKQLGLRRARSAVNHLVSRGIDRRRLEAMVSKGESQPLIL--TQEPERRNRR 164
>gi|254492390|ref|ZP_05105562.1| OmpA family protein [Methylophaga thiooxidans DMS010]
gi|224462282|gb|EEF78559.1| OmpA family protein [Methylophaga thiooxydans DMS010]
Length = 281
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 1/111 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + L L +A + I I SHTD+ G + N +S
Sbjct: 170 VNKLTVYFEIEQATLTPVAKKALTRLAEYVKVDDSINQIKIASHTDNHGRRRLNEPLSDA 229
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA IK +LI + IS+ + P +N T +GR N+R EI +
Sbjct: 230 RALSIKRFLITEFEIPEQLISINSYVEAKPTASNKTPLGRAKNRRAEITLV 280
>gi|89053487|ref|YP_508938.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88863036|gb|ABD53913.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 217
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 65/176 (36%), Gaps = 12/176 (6%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ + S+ ++ CG E + ++ +
Sbjct: 9 RSVLASLGSTLALTACGSTFVETGRPLGAHLDEGQFGGPTRSN---------IGVHNGDI 59
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+G+ +P ++F + L+ + +L A + FP ++ HTD++G
Sbjct: 60 QWAEILGERFANSVPTTINFAFNSAELDAEARNILAQQAAFIRNFPEVRFSVYGHTDAVG 119
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N + + RA ++L+ +GVS +R ++ P+ D + R N+R
Sbjct: 120 SNGYNQRLGRRRARAAVNFLVSQGVSRHRLAALVSLGETQPVVATDMEERR--NRR 173
>gi|126175214|ref|YP_001051363.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|153001540|ref|YP_001367221.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
gi|160876276|ref|YP_001555592.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|217972531|ref|YP_002357282.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
gi|125998419|gb|ABN62494.1| OmpA/MotB domain protein [Shewanella baltica OS155]
gi|151366158|gb|ABS09158.1| OmpA/MotB domain protein [Shewanella baltica OS185]
gi|160861798|gb|ABX50332.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|217497666|gb|ACK45859.1| OmpA/MotB domain protein [Shewanella baltica OS223]
gi|315268465|gb|ADT95318.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 196
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 52/161 (32%), Gaps = 1/161 (0%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
K + V + E + D V +
Sbjct: 37 DIKDACPNTAPDTQVMANGCVEEVEVEATASADCSTSNPNAEFSADCHNISTAVVYFEFA 96
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
++ L L+ L + + HTD +GT + N +S +RA +K L++
Sbjct: 97 IAEVDFSQWKTLALVKAYLAAN-DVALTLVGHTDIVGTPEFNYQLSLQRAQNVKRILVED 155
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ +V G P+ N + GR N+R++ + +
Sbjct: 156 YGFNPNRFTVMGKGISEPVADNRSSEGRSLNRRVQFIVNNK 196
>gi|193213926|ref|YP_001995125.1| OmpA/MotB domain-containing protein [Chloroherpeton thalassium ATCC
35110]
gi|193087403|gb|ACF12678.1| OmpA/MotB domain protein [Chloroherpeton thalassium ATCC 35110]
Length = 702
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 37/106 (34%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I V + + K + + + P I IQ + + G L S+ERA
Sbjct: 51 INDDVFYPGTATINKSTQAAVDRLGLYVAARPDLKILIQGNWSNEGNTVREKLYSEERAL 110
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I+ +LI I G+ P+ T + N+ + I
Sbjct: 111 AIQRFLIYTHNIDPSRIQTVGYGSARPLTVEKTAADKARNRAVTIV 156
>gi|294085867|ref|YP_003552627.1| peptidoglycan-associated lipoprotein [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665442|gb|ADE40543.1| Peptidoglycan-associated lipoprotein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 186
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 55/181 (30%), Gaps = 5/181 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M++ L + + C AS ++ + +S
Sbjct: 1 MVQRLIAILSAAFLLGACETASTTSSDSASDSASSSASGAATASASSTDTSSSSASSSAS 60
Query: 61 TGIVVS----RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + + + L L + L P V+ I+ H
Sbjct: 61 SSSSSADDAMTTAEKLARVGNTVYFDFDSAVLSYDAQVTLSRQSAFLQLNPEAVVVIEGH 120
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
D GT + NL + RA + +L+ +G+ + R +V + + P + N+
Sbjct: 121 CDERGTREYNLALGDRRASAARDFLLAKGIDAARIRTVS-YGKERPAMLGSNEESWAKNR 179
Query: 177 R 177
R
Sbjct: 180 R 180
>gi|146302267|ref|YP_001196858.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146156685|gb|ABQ07539.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 643
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
I + + + + + L+ I +LN+ P+ + I+SHTDS + + N
Sbjct: 522 DDLGKCFGIKMIYFDLDKSNIRTEAALDLEKILDVLNQNPTMKLDIRSHTDSRASHQYNE 581
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-----NDTKVGRQNNQRIEIQI 182
+S RA S+LI + + ++ +G+ ++ N T+ Q N+R E I
Sbjct: 582 ALSDRRAKSTISWLI-QNGVAKNRLTGKGYGETQLVNQCSDGVNCTEEEHQMNRRSEFII 640
Query: 183 F 183
Sbjct: 641 T 641
>gi|325274366|ref|ZP_08140461.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
gi|324100500|gb|EGB98251.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
Length = 163
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 4/141 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATIL 103
+ E L+ G + G + V F S+ L + +++ I L
Sbjct: 25 APPKGLTPEQIAVLKREGFTPTDEGW--AYDLSGKVLFGSDLDSLNSQSQAIVERIGKAL 82
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + HTDS G N +S+ RA + + + I +G P+
Sbjct: 83 LGVGIQRVRVDGHTDSSGKAAYNQELSERRAQSVAK-ALVGVGMQPQNIQSQGLGSSQPV 141
Query: 164 DTNDTKVGRQNNQRIEIQIFP 184
N T GR N+R+ I +
Sbjct: 142 ADNRTSAGRTENRRVSIVVAS 162
>gi|304410057|ref|ZP_07391676.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307302230|ref|ZP_07581988.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|304351466|gb|EFM15865.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306914268|gb|EFN44689.1| OmpA/MotB domain protein [Shewanella baltica BA175]
Length = 196
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 52/161 (32%), Gaps = 1/161 (0%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
K + V + E + D V +
Sbjct: 37 DIKDACPNTAPDTQVMANGCVEEVEVEATASANCSTSNPNAEFSADCHNISTAVVYFEFA 96
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
++ L L+ L + + HTD +GT + N +S +RA +K L++
Sbjct: 97 IAEVDFSQWKTLALVKAYLAAN-DVALTLVGHTDIVGTPEFNYQLSLQRAQNVKRILVED 155
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ +V G P+ N + GR N+R++ + +
Sbjct: 156 YGFNPNRFTVMGKGISEPVADNRSSEGRSLNRRVQFIVNNK 196
>gi|332290734|ref|YP_004429343.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332168820|gb|AEE18075.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 293
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 7/134 (5%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ DT I ++ ++ + V F + + +L +AT++N P+ ++ H
Sbjct: 135 INDTDIEINVEKGVVFISLSDKVLFKSGSYNITSRAEEILGKVATVINGKPNFEALVEGH 194
Query: 117 TDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
TD++ K +N +S +RA I L+ G + + I+ G + P+ N T
Sbjct: 195 TDNVPYNKGGVLIDNWDLSAKRATAIVRKLVDLGANPAQLIAA-GRSEFVPLVDNSTAEN 253
Query: 172 RQNNQRIEIQIFPR 185
R N+R +I + P+
Sbjct: 254 RSTNRRTKIYVLPK 267
>gi|307721192|ref|YP_003892332.1| OmpA/MotB domain-containing protein [Sulfurimonas autotrophica DSM
16294]
gi|306979285|gb|ADN09320.1| OmpA/MotB domain protein [Sulfurimonas autotrophica DSM 16294]
Length = 259
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 11/177 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + ++IVN+ ++ D +E + Q I + D +P
Sbjct: 68 SKKRMLEATPIDIQDETSEIVNRVQQAAGD--ANEMMEKTQSPAITIKEAQDGFVIKLPA 125
Query: 79 HVSF-VSEVFL-EKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGT-----LKNNLLIS 130
+ F + + L L+ I I+ + P ++ +Q HTD+ G K+N +S
Sbjct: 126 TLLFNPGSATIENQDALLFLKRITLIIQELPNDMLVDVQGHTDNTGPGANSPYKDNWELS 185
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
RA + LI GV R S GFA PI TN T GR+ N+R+E+ + + N
Sbjct: 186 TARALAVLHELILDGVDPARM-SATGFAQYQPIATNATATGREKNRRVELHFYGKKN 241
>gi|317153138|ref|YP_004121186.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943389|gb|ADU62440.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 244
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 69/208 (33%), Gaps = 25/208 (12%)
Query: 1 MIKELGLSMFIMTTISGC---------GLASREKKKVF--------LHKSNDTDIVNKRF 43
M+ + +F++ I S ++ + L +
Sbjct: 38 MM--VMFVLFVVLFIYSSTHQDVKVLFSQQSADEAQAASALDPLIGLIGQLSSRAGANGS 95
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSFV-SEVFLEKKFLPMLQLIAT 101
++ A+++ + + G+ V R G I + + F +E L + L IA
Sbjct: 96 QETVRVADNQVLFRSRTDGVTVVREGQGRIRVTLRGDLFFAVNEAGLAPESGQYLSEIAE 155
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGF 157
++ TV I ++ G + S RA + L+ R R + + G
Sbjct: 156 VVRLSVGTVHVIGYASEDEGGNEAGTRQGFALSTGRATEVADQLMTRFKVDPRRVVITGR 215
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+P T + N+R+EI I
Sbjct: 216 GRLHPELPGTTPANQAMNRRVEIVITNE 243
>gi|51245063|ref|YP_064947.1| outer membrane porin F [precursor] [Desulfotalea psychrophila
LSv54]
gi|50876100|emb|CAG35940.1| related to outer membrane porin F [Precursor] [Desulfotalea
psychrophila LSv54]
Length = 241
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++ L + P+L +A L + I+ HTDS G NL +S RA+ ++
Sbjct: 133 FDLNSARLRRSAYPLLAELARALEDERVVEHQVCIKGHTDSAGAGSYNLQLSYSRANAVR 192
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YL G+S ++ + V G+ P+ TN ++ RQ N+R+E+ +
Sbjct: 193 DYLAGAGMSVDK-LEVFGYGENMPLVTNSSEANRQLNRRVEVSL 235
>gi|302038649|ref|YP_003798971.1| peptidoglycan-associated lipoprotein pal [Candidatus Nitrospira
defluvii]
gi|300606713|emb|CBK43046.1| Peptidoglycan-associated lipoprotein Pal (modular protein)
[Candidatus Nitrospira defluvii]
Length = 250
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 4/162 (2%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSFV 83
++ G+ L K E Q I + + +
Sbjct: 90 DSVSGGKAPSEERLGGGGTMLAKVEPSESTARQIEDIRREQAKEQAASAEAGLRDVFFGY 149
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ ++ L A + ++ I+ H D GTL NL++ ++RA +++YL++
Sbjct: 150 DSWTITEEGRQSLTQDAQWIKANAGALVKIEGHCDERGTLAYNLVLGEKRAKAVRNYLVE 209
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++V + + P + Q N+R + + +
Sbjct: 210 L-GVGANRLAVVSYGKERPFCNERNESCYQQNRRGHVVVRSK 250
>gi|163755499|ref|ZP_02162618.1| putative flagellar motor protein MotB [Kordia algicida OT-1]
gi|161324412|gb|EDP95742.1| putative flagellar motor protein MotB [Kordia algicida OT-1]
Length = 286
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ D I ++ ++ I + F + K +L +A ++N P+ ++ H
Sbjct: 135 IDDPDIEINVEKGVVFISIADKLLFKSGSYNVTDKAKVVLGKVAKVVNSKPNFECMVEGH 194
Query: 117 TDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD++ K +N +S +R+ I L + GV+ + I+ G +Y P+ NDT R
Sbjct: 195 TDNVPYNKGVLIDNWDLSVKRSTSIIRVLQELGVNPGQLIAA-GRSYYVPLVENDTPENR 253
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 254 ATNRRTRIVVLPK 266
>gi|149200848|ref|ZP_01877823.1| OmpA family protein [Roseovarius sp. TM1035]
gi|149145181|gb|EDM33207.1| OmpA family protein [Roseovarius sp. TM1035]
Length = 220
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 60/179 (33%), Gaps = 14/179 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + I I+ S++ + N FG E L T
Sbjct: 1 MKHVF---AIAGLIAATACTSQDAVYRSYFGEAGAHVDNGHFG------EAVMNNHLVMT 51
Query: 62 G---IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G + + + L+ L+ A + +FP + HTD
Sbjct: 52 GERSYTFDLANRFASEVMSTVNFAFNSAELDAGARDTLREQAQWIRQFPEVRFRVYGHTD 111
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
++G+ N + RA + ++L +G+S R +V F P+ + R N+R
Sbjct: 112 AVGSDSYNKSLGMRRAQAVVAFLTSQGISRARLEAVASFGETQPLIVTQGRERR--NRR 168
>gi|83749427|ref|ZP_00946420.1| Chemotaxis motB protein [Ralstonia solanacearum UW551]
gi|207738949|ref|YP_002257342.1| outer membrane protein [Ralstonia solanacearum IPO1609]
gi|83723907|gb|EAP71092.1| Chemotaxis motB protein [Ralstonia solanacearum UW551]
gi|206592320|emb|CAQ59226.1| outer membrane protein [Ralstonia solanacearum IPO1609]
Length = 215
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + I+ + ++ L+ + +L+ +A
Sbjct: 56 QMEAQRRKTLEQALAGPLAAGRVTLVNGRIGIS---GSVLFALNSDQLQPEGRELLKSLA 112
Query: 101 TILNKF---PSTVIAIQSH------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L+ + ++ + +N +S +RA + LI G+
Sbjct: 113 GPLSAYLRSRDEILMVSGFADDQQVHAGNRRFADNWELSAKRALTVTRALIDAGIPGASV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+ +N GR N+R+EI PR
Sbjct: 173 FAAA-FGSEQPVSSNADDEGRAKNRRVEIAPVPR 205
>gi|320533459|ref|ZP_08034136.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
gi|320134317|gb|EFW26588.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
Length = 490
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 98 LIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A + ++P + I HTD + N +S++RA+ +K+ L Q SV G
Sbjct: 201 TVAGQIAQYPDGGTLTIVGHTDDVQDDAYNQALSEKRANTVKTRLGQLTGLDKWNPSVAG 260
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
P + T R N+R+EI + P G
Sbjct: 261 KGESEPRVSGTTDEARAANRRVEITLTPTG 290
>gi|150026440|ref|YP_001297266.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
JIP02/86]
gi|149772981|emb|CAL44465.1| Probable outer membrane protein, OmpA family [Flavobacterium
psychrophilum JIP02/86]
Length = 624
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++ + ++ L + ++ K+P VI +SHTDS G K N+L+S R
Sbjct: 512 VILSDINFDFNKSNITQEGAAELDKLVAVMTKYPEMVIFAKSHTDSRGDDKYNMLLSDRR 571
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND--TKVGRQNNQRIEIQIFPR 185
A Y+I +G++ NR I+ GF P D T+ Q N+R E I +
Sbjct: 572 AKSTVQYIISKGIAVNR-ITGEGFGKSEPKVQCDKCTEAEHQKNRRSEFMIVKK 624
>gi|113868784|ref|YP_727273.1| outer membrane protein or related peptidoglycan-associated
(lipo)protein [Ralstonia eutropha H16]
gi|113527560|emb|CAJ93905.1| outer membrane protein or related peptidoglycan-associated
(lipo)protein [Ralstonia eutropha H16]
Length = 168
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 1/113 (0%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
++ + ML A L I IQ +TD GT + NL
Sbjct: 55 NDPNSPLAKRSVYFDFDSYTVKSDYQGMLGEHAKYLGSNKGRKILIQGNTDERGTSEYNL 114
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ Q+RA+ ++ L + + + P T + N+R +I
Sbjct: 115 ALGQKRAEAVRRSLAS-MGVPDGQMEAVSLGKEKPKATGHDEASWAENRRADI 166
>gi|307611849|emb|CBX01563.1| hypothetical protein LPW_32501 [Legionella pneumophila 130b]
Length = 294
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Query: 77 PVHVSFVSEVFLEKKFLPM-LQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERA 134
F + L + L+ IA ++ VI I H D G N ISQ RA
Sbjct: 185 ESVFHFGVDSKLLSDADKVQLRRIAQYVDADVQIDVIKIIGHADDSGRKGYNNAISQYRA 244
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ +K+YLI R R +S+ PI NDT GR N+R+ + + +
Sbjct: 245 ESVKNYLI-RLGVPQRKLSITWVGALQPIARNDTDEGRAANRRVVVTLIKK 294
>gi|163745826|ref|ZP_02153185.1| peptidoglycan-associated lipoprotein, putative [Oceanibulbus
indolifex HEL-45]
gi|161380571|gb|EDQ04981.1| peptidoglycan-associated lipoprotein, putative [Oceanibulbus
indolifex HEL-45]
Length = 178
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 65/187 (34%), Gaps = 11/187 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + S +++ ++ + ++ ++ T
Sbjct: 1 MKRILTSTLLISALAVSACTNPDRFGADGMGGAGVGANGGAGVNA--GVVPGSANDPTST 58
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+GD + + V + L L L I+ H D G
Sbjct: 59 AYFQQAVGDRV-------LFLVDQSTLTDVGRATLDGQVAWLQTNSDYQAVIEGHADEQG 111
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
T + N+ + RA+ ++ Y+I RG++++R ++ + + PI+ + N+R +
Sbjct: 112 TREYNIALGGRRANAVREYMISRGIAASRLKTIS-YGKERPIEICSDEACYAKNRRA-VT 169
Query: 182 IFPRGNI 188
+ G +
Sbjct: 170 VLAGGAL 176
>gi|54295802|ref|YP_128217.1| hypothetical protein lpl2892 [Legionella pneumophila str. Lens]
gi|53755634|emb|CAH17136.1| hypothetical protein lpl2892 [Legionella pneumophila str. Lens]
Length = 294
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Query: 77 PVHVSFVSEVFLEKKFLPM-LQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERA 134
F + L + L+ IA ++ VI I H D G N ISQ RA
Sbjct: 185 ESVFHFGVDSKLLSDADKVQLRRIAQYVDADVQIDVIKIIGHADDSGRKGYNNAISQYRA 244
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ +K+YLI R R +S+ PI NDT GR N+R+ + + +
Sbjct: 245 ESVKNYLI-RLGVPQRKLSITWVGALQPIARNDTDEGRAANRRVVVTLIKK 294
>gi|301155739|emb|CBW15207.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
parainfluenzae T3T1]
Length = 156
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 58/179 (32%), Gaps = 30/179 (16%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + L + ++ C ++ + + + T
Sbjct: 1 MNKFVKSLLVAGSVAALAACSSSNNDAAGNGANNNGQTF--------------------- 39
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G V + + +E +++ +L A LN P++ + ++ +TD
Sbjct: 40 --GGYSVEDLQQ----RYNTVYFGFDKFNIEGEYVQILDAHAAYLNATPASKVVVEGNTD 93
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RAD + + +S + + P + N+R
Sbjct: 94 ERGTPEYNIALGQRRADAV-KGFLAGKGVDAGKVSTVSYGEEKPAVLGHDEAAYSKNRR 151
>gi|146275632|ref|YP_001165792.1| OmpA/MotB domain-containing protein [Novosphingobium
aromaticivorans DSM 12444]
gi|145322323|gb|ABP64266.1| OmpA/MotB domain protein [Novosphingobium aromaticivorans DSM
12444]
Length = 291
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L + L AT + ++ + +TDS+G + N +S++RA+ +
Sbjct: 177 NVYFDTGKYNLSPQAKAELCNAATTAEGIDNALMLVVGYTDSVGDDEYNQTLSEKRANSV 236
Query: 138 KSYLIQRG-VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFPRG 186
+YL Q R ++ G A P+ +NDT+ G+ N+R+ + + +G
Sbjct: 237 INYLQQACRWKPYRMLTPTGMAKADPLASNDTEEGKAQNRRVAVNVLVSKG 287
>gi|197336986|ref|YP_002157822.1| outer membrane protein [Vibrio fischeri MJ11]
gi|197314238|gb|ACH63687.1| outer membrane protein [Vibrio fischeri MJ11]
Length = 255
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + L K+ +L + + + + + ++ HTDS G+ N + +RA+
Sbjct: 150 LARVYFNFDKSTLTKRSEYVLDKLYSKMGE-KDIKLKVEGHTDSKGSSTYNYDLGLKRAN 208
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+Q+ + SV + PI TN T GR+ N+R+EI+
Sbjct: 209 IVYQYLVQQ-GAEPNQFSVVTKGEREPIKTNKTANGREKNRRVEIE 253
>gi|59713413|ref|YP_206188.1| outer membrane protein [Vibrio fischeri ES114]
gi|59481661|gb|AAW87300.1| outer membrane protein [Vibrio fischeri ES114]
Length = 253
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + L K+ +L + + + + + ++ HTDS G+ N + +RA+
Sbjct: 148 LARVYFNFDKSTLTKRSEYVLDKLYSKMGE-KDIKLKVEGHTDSKGSSTYNYDLGLKRAN 206
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ YL+Q+ + SV + PI TN T GR+ N+R+EI+
Sbjct: 207 IVYQYLVQQ-GAEPNQFSVVTKGEREPIKTNKTANGREKNRRVEIE 251
>gi|229591316|ref|YP_002873435.1| putative phosphate-related ABC transporter exported protein
[Pseudomonas fluorescens SBW25]
gi|229363182|emb|CAY50235.1| putative phosphate-related ABC transport system, exported protein
[Pseudomonas fluorescens SBW25]
Length = 443
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 57/162 (35%), Gaps = 13/162 (8%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K + I + ++ + + + ++R +T
Sbjct: 292 TQSSKGQAIVAASGFIAQQVQAMDVEP-----RASMPEGYQTIAREAQRLTVNFR---FE 343
Query: 83 VSEVFLEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L+ K LQ + + + + D+ + L+S+ RA ++
Sbjct: 344 EGSASLDNKARQDLQRVVAYIKSHDKLDKQVTLVGFGDAKNDPQRAALLSKLRAMAVRRE 403
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L++ GV +RGF + P+ N GR N+R+E+ +
Sbjct: 404 LVKSGVV---LREIRGFGAQMPVAANTADEGRIKNRRVEVWV 442
>gi|198275312|ref|ZP_03207843.1| hypothetical protein BACPLE_01473 [Bacteroides plebeius DSM 17135]
gi|198271895|gb|EDY96165.1| hypothetical protein BACPLE_01473 [Bacteroides plebeius DSM 17135]
Length = 238
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 75/219 (34%), Gaps = 40/219 (18%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV---------------------- 39
+ + + + SGCG+ + K + S
Sbjct: 4 MNSMAILLSACLVFSGCGMTNTAKGGMIGGGSGAALGAIIGGVVGHGKGAAIGAAVGAAV 63
Query: 40 ----NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFVSEVFLEKKF 92
G +DKA + Q++ + + + + F +
Sbjct: 64 GTGAGVLIGKKMDKAAAQ-AEQIEGAQVEQVTDNNGLQAVKVTFDSGILFNTSSATLSSS 122
Query: 93 LPMLQLIATI--LNKFPSTVIAIQSHTDSIGT--------LKNNLLISQERADVIKSYLI 142
LN+ +AI +TD+ G + NL +SQERA + SYL+
Sbjct: 123 AKSALSKFANNVLNQNKDMDVAIYGYTDNTGWKNSTAEQSRQKNLDLSQERAQSVSSYLL 182
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G SS++ SV G + P+ N T GRQ N+R+E+
Sbjct: 183 ACGASSSQIKSVTGMGEENPVADNSTAAGRQENRRVEVY 221
>gi|241667260|ref|ZP_04754838.1| OmpA family peptidoglycan-associated lipoprotein [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254875811|ref|ZP_05248521.1| peptidoglycan-associated lipoprotein [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254841832|gb|EET20246.1| peptidoglycan-associated lipoprotein [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 208
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 60/201 (29%), Gaps = 27/201 (13%)
Query: 1 MIKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + + M ++ C + + K D SS + +
Sbjct: 1 MKKSIVSIAVVSSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSS----QIYGSDNM 56
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ +++ + L A L P I + +TD
Sbjct: 57 SSDQVE-QMKKELMDINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTD 115
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT------------- 165
G+ K N + Q+RA+ + +YL+ + + I V + P
Sbjct: 116 PRGSEKYNFNLGQKRAEAVYNYLLGK-NVNKDQICVVSYGKLKPAAEPTQFYDEFCTDGV 174
Query: 166 ND------TKVGRQNNQRIEI 180
ND ++ ++R EI
Sbjct: 175 NDMCSYKASEKAFYLDRRTEI 195
>gi|149911588|ref|ZP_01900201.1| outer membrane protein OmpA [Moritella sp. PE36]
gi|149805367|gb|EDM65379.1| outer membrane protein OmpA [Moritella sp. PE36]
Length = 303
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATIL-NKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + L +A + + I ++TD+ G NL +S++RA+
Sbjct: 192 SNTLFKFNSAEISDSS--ALAKLAKKMSASHVEINVEIVAYTDTSGPEAYNLKLSKKRAE 249
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
++ Y I++ + + I+ PI +N T+ GR N+R++I
Sbjct: 250 AVRDYFIKQ-GVNKQVINTAWKGEANPIASNKTRAGRIKNRRVDIIYIENN 299
>gi|312149267|gb|ADQ29338.1| outer membrane protein [Borrelia burgdorferi N40]
Length = 381
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I V + I + S L+K++ + LIA +L KF I I+ HT+
Sbjct: 259 KAIEVEKNNKGINLSFDIEFYPNSFQILQKEYKKI-DLIAKLLEKFKKNNILIEGHTEQF 317
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + +S++RA I +YLI+ V I +G+ + P + + + N+R+EI
Sbjct: 318 GLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEI 376
Query: 181 QIFPR 185
I
Sbjct: 377 TILNN 381
>gi|158604954|gb|EAT98065.3| OmpA/MotB [Campylobacter concisus 13826]
Length = 259
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 68/187 (36%), Gaps = 14/187 (7%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDI--VNKRFGSSLDKAEDEFQMQLQDTG---IVV 65
++ + G + +K +S T K + + + L +G I +
Sbjct: 56 ALSVLEGGARPDSQVEKETDPESRRTPKPKAQKGAQNEVTSTVKKINELLTASGAPEITM 115
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLE-KKFLPMLQLIATILNKFPS-TVIAIQSHTDS--- 119
D +P + F + + L+ I I+ K P+ I +TD+
Sbjct: 116 EESEDGFIVRLPAAMLFDKDSAEISGEDAKLFLKRIGMIIAKMPNEVKTDIIGYTDNTNP 175
Query: 120 --IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
KNN +S RA + L+ GV R I+ G A PI +N T GR N R
Sbjct: 176 SKDSIYKNNWQLSTARALSVLEELVSDGVPQERLIT-SGRASFDPIASNSTDEGRAKNNR 234
Query: 178 IEIQIFP 184
+EI
Sbjct: 235 VEIHFVS 241
>gi|148980294|ref|ZP_01815981.1| putative sodium-type flagellar protein MotY precursor [Vibrionales
bacterium SWAT-3]
gi|145961313|gb|EDK26623.1| putative sodium-type flagellar protein MotY precursor [Vibrionales
bacterium SWAT-3]
Length = 299
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKS 139
V L + + I+T++ + I I +TD+ G NL +S++R +
Sbjct: 195 FQQGAVDLTEGQKRTINDISTLVKRDSRIIKILIDGYTDNSGDSVANLQLSKQRGSDVAQ 254
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + S + I +RG +YP N T+ GR N+R+EI++ +
Sbjct: 255 WFMGN-GVSKQMIEIRGHGDRYPKYDNTTQQGRDKNRRVEIRLVRK 299
>gi|78049429|ref|YP_365604.1| hypothetical protein XCV3873 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325928969|ref|ZP_08190130.1| flagellar motor protein [Xanthomonas perforans 91-118]
gi|78037859|emb|CAJ25604.1| OmpA family protein [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|325540658|gb|EGD12239.1| flagellar motor protein [Xanthomonas perforans 91-118]
Length = 223
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 13/149 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + + I + + L+ + +L+ +A
Sbjct: 56 QAEAQRRQTLEQALAAPLAAGRVTL--VDGRIGIR-GNVLFAFNSDELQPEGREVLKSLA 112
Query: 101 TILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
T L + ++ + TD +N +S +RA + LI GV ++
Sbjct: 113 TPLTHYLRARDEILMVSGFTDDRPVLGGNRRYADNWELSAQRALTVTRALIAEGVPASSV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ F + P+D+N + R N+R+EI
Sbjct: 173 FAAA-FGSQQPVDSNADEARRAKNRRVEI 200
>gi|294085848|ref|YP_003552608.1| flagellar motor protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665423|gb|ADE40524.1| flagellar motor protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 389
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 73/185 (39%), Gaps = 17/185 (9%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGS---SLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
A+++K + + + + R + + L+ V +GD
Sbjct: 208 AQATKDKIAIANLGKSLNNALASRVQELQRFRSEFFGRLRDILKGRN-DVQIVGDRFVFQ 266
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDSI----GTLK 124
+ + + + +A L + + V+ + HTD I G
Sbjct: 267 -SEVLFAPGQADIGDSGREQMTKLAVALAEIAREIPDDINWVLQVDGHTDDIPIRAGRYA 325
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+N +S ERA + +LI +G+ NR ++ G+ P+ +++ RQ N+RIE++I
Sbjct: 326 DNWDLSTERALSVVRFLISQGLPPNR-LAATGYGEHQPLINENSEDARQKNRRIELKITQ 384
Query: 185 RGNIK 189
R + K
Sbjct: 385 RVSAK 389
>gi|226320927|ref|ZP_03796478.1| outer membrane protein [Borrelia burgdorferi 29805]
gi|226233699|gb|EEH32429.1| outer membrane protein [Borrelia burgdorferi 29805]
Length = 381
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I V + I + S L+K++ + LIA +L KF I I+ HT+
Sbjct: 259 KAIEVEKNNKGINLSFDIEFYPNSFQILQKEYKKI-DLIAKLLEKFKKNNILIEGHTEQF 317
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + +S++RA I +YLI+ V I +G+ + P + + + N+R+EI
Sbjct: 318 GLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEI 376
Query: 181 QIFPR 185
I
Sbjct: 377 TILNN 381
>gi|149375283|ref|ZP_01893054.1| OmpA/MotB domain protein [Marinobacter algicola DG893]
gi|149360319|gb|EDM48772.1| OmpA/MotB domain protein [Marinobacter algicola DG893]
Length = 355
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 14/153 (9%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ + LQD + +GD + L + L +A +L
Sbjct: 206 ERYQSEFFGRLRDILQDNE-NIRIVGDRFLLP-SELLFASGSARLGPEGQRELDKLAEVL 263
Query: 104 N-------KFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFI 152
+ ++ I HTD I N +S RA + YL GV NR +
Sbjct: 264 LDVVAAIPEDIDWILRIDGHTDRIPINTEAFPSNWELSTARAVAVVRYLASEGVPQNRMV 323
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ GF +P+ + + + N+RIEI++ R
Sbjct: 324 AA-GFGEFFPVASGGSAEALRQNRRIEIKLTDR 355
>gi|116327359|ref|YP_797079.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116120103|gb|ABJ78146.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 224
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 5/140 (3%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFP 107
+ F+ + + + I + + + F FL + ++ + T+L
Sbjct: 70 RLIATFRSLIDAGKLKIKIIDGRMVVVLSSDILFPVGSAFLSSAGIASIREVTTLLASLG 129
Query: 108 STVIAIQSHTDSIG---TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I+ HTD N ++ RA + +I+ G+ R IS P
Sbjct: 130 GKRFQIEGHTDDTPTGIKGYTNWELASSRALNVLHTMIKAGMPEER-ISAASMGASRPAL 188
Query: 165 TNDTKVGRQNNQRIEIQIFP 184
N + R N+RIEI I P
Sbjct: 189 PNTSPENRSANRRIEIVIVP 208
>gi|312959447|ref|ZP_07773964.1| OmpA/MotB [Pseudomonas fluorescens WH6]
gi|311286164|gb|EFQ64728.1| OmpA/MotB [Pseudomonas fluorescens WH6]
Length = 381
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 3/169 (1%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S+ K + +N K + LD E + ++D+ + + R +++ PV S
Sbjct: 131 SKPKPLAKVDVTNVQMPDPKVTQAWLDDYEPRLRAAIKDSNLQLERRDNVLVVIAPVDGS 190
Query: 82 FVSE--VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L L +A + P T + + H D+ GT + +++ERA I S
Sbjct: 191 YNPKRPAMLLPVTLGPFTRVAKAVEADPKTAVLVLGHVDATGTAPASQALTKERAQSIAS 250
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
G+ +R + +RG P ND+ GR N+R+EI R +
Sbjct: 251 IFSLSGLKQDRLM-LRGMGDLMPRAANDSNQGRALNRRMEIMFTQRTTM 298
>gi|124004937|ref|ZP_01689780.1| peptidoglycan-associated cytoplasmic membrane protein, putative
[Microscilla marina ATCC 23134]
gi|123989615|gb|EAY29161.1| peptidoglycan-associated cytoplasmic membrane protein, putative
[Microscilla marina ATCC 23134]
Length = 693
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V ++K+ L+ + + L P + + H D GT N +S +RA +
Sbjct: 579 VVFFDYKSDNIKKEHEKDLEKLVSYLISNPDANLVLNGHADQTGTETRNKQLSSDRARKV 638
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
YLI R ++ NR ++++ + + ID D + GR N+R+E +I
Sbjct: 639 MEYLIGRDINPNR-VTLKAWGEQKLIDKRDNEKGRARNRRVECEIIS 684
>gi|294850964|ref|ZP_06791640.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026]
gi|294821607|gb|EFG38603.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026]
Length = 343
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---T 109
++ + +GD + + K ++ +A + + P
Sbjct: 205 EILSDKENIRIVGDRFVFQ-SEVLFPTGSAKINPKGQVEMKKLADAIIQLNREIPDDINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI GV +NR ++ GF P+D
Sbjct: 264 VLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGEYQPLD 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
T +T R N+RIE+++ R
Sbjct: 323 TANTADARARNRRIELKLTER 343
>gi|225549312|ref|ZP_03770285.1| outer membrane protein [Borrelia burgdorferi 94a]
gi|225370170|gb|EEG99610.1| outer membrane protein [Borrelia burgdorferi 94a]
Length = 389
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I V + I + S L+K++ + LIA +L KF I I+ HT+
Sbjct: 267 KAIEVEKNNKGINLSFDIEFYPNSFQILQKEYKKI-DLIAKLLEKFKKNNILIEGHTEQF 325
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + +S++RA I +YLI+ V I +G+ + P + + + N+R+EI
Sbjct: 326 GLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEI 384
Query: 181 QIFPR 185
I
Sbjct: 385 TILNN 389
>gi|163738369|ref|ZP_02145784.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
gi|161388290|gb|EDQ12644.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
Length = 211
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 65/177 (36%), Gaps = 18/177 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MIK L +T + C + E + + G E +F +QL
Sbjct: 4 MIKYAALIGLSLTA-AACEYEAGEPLDRSVFGNATNSNAAVMAG------ERDFAIQLA- 55
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+R + + I L+ +L A + +FP + HTD++
Sbjct: 56 -----TRFAEEVPTTIT---FAFDSAQLDGNARAVLDKQAHWIRQFPEVRFRVFGHTDAV 107
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ N + RA +YL+ RG+S +R +V F P+ + R N+R
Sbjct: 108 GSAGYNKSLGLRRARAAVNYLVSRGISRSRLQAVVSFGETQPLIPTSDRERR--NRR 162
>gi|115522688|ref|YP_779599.1| hypothetical protein RPE_0661 [Rhodopseudomonas palustris BisA53]
gi|115516635|gb|ABJ04619.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 341
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 60/159 (37%), Gaps = 13/159 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + + + +GD + L + L
Sbjct: 186 AQRVQELSRYRSEFFGRLR-AILGNRSEIRIVGDRFVFQ-SEVFFDTGQAVLLPEGRAEL 243
Query: 97 QLIATIL----NKFPS---TVIAIQSHT---DSIGTLKNNLLISQERADVIKSYLIQRGV 146
+A++L + P V+ + HT G K+N +S RA + YL+ GV
Sbjct: 244 DKLASVLIDLGKQIPDEITWVLRVDGHTDVRPITGAFKSNWELSSARAISVVQYLVTLGV 303
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ R ++ GFA P+D T+ + N+RIE+++ R
Sbjct: 304 PAQRLVAA-GFAEFQPLDVAATEEAYRRNRRIELKLTER 341
>gi|329948277|ref|ZP_08295121.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328522801|gb|EGF49909.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 490
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 98 LIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A ++++P + I HTD + N +S++RA+ +K+ L Q SV G
Sbjct: 201 TVAGQISQYPDGGTLTIVGHTDDVQDDAYNQALSEKRANAVKTRLEQLTGLDKWNPSVAG 260
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
P + T R N+R+EI + P G
Sbjct: 261 KGESEPRVSGTTDEARAANRRVEITLTPTG 290
>gi|254559218|ref|YP_003066313.1| chemotaxis protein MotB [Methylobacterium extorquens DM4]
gi|254266496|emb|CAX22260.1| Chemotaxis protein MotB [Methylobacterium extorquens DM4]
Length = 474
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 10/145 (6%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLPMLQLIA 100
+ + +A + V R G+ + I + + K + L+ IA
Sbjct: 328 AEIARAVPSLPNGAPAPQVEVRRTGEGVLISITDEINYSMFGIGSAEPTPKVVKALERIA 387
Query: 101 TILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
ILN P + ++ HTD +N +S RA + L++ G+ R + G+
Sbjct: 388 KILNSRPG-RVVVRGHTDGRPFRSETYDNWRLSSARAQMASYMLVRGGLDEARIDRIEGY 446
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
A + P N+ K N+RIEI +
Sbjct: 447 ADRQPRIANNPKA--AENRRIEILL 469
>gi|117920980|ref|YP_870172.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117613312|gb|ABK48766.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 290
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V L + L I L+ P + + ++TDS G N +S +
Sbjct: 177 IAFTVLNYEEGGTDLTRFSQQQLSRIQEYLSYDPDVELVLVDAYTDSYGGRSVNQKVSDK 236
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ +K + + G+ +R ++V G + + +ND R N+R+ I+I
Sbjct: 237 RAESVKDFFVASGIPQDRIVTV-GHGERRHVASNDDIEERALNRRVVIRI 285
>gi|262066137|ref|ZP_06025749.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
33693]
gi|291380232|gb|EFE87750.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
33693]
Length = 93
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ ML + + + + + ++ HTDSIG+ + N+ +S+ RA+ +K+ LI+ G++ R
Sbjct: 1 YFEMLNNLKDFIEQN-NYEVTLEGHTDSIGSNQYNIGLSRRRAEAVKAKLIEFGLAEERI 59
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + +YP+ TN+T GR N+R+E ++ R
Sbjct: 60 VGIEAKGEEYPVATNETPEGRLQNRRVEFRLVQR 93
>gi|225024496|ref|ZP_03713688.1| hypothetical protein EIKCOROL_01371 [Eikenella corrodens ATCC
23834]
gi|224942771|gb|EEG23980.1| hypothetical protein EIKCOROL_01371 [Eikenella corrodens ATCC
23834]
Length = 217
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 54/147 (36%), Gaps = 11/147 (7%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF--LEKKFLPMLQLIATIL 103
++D Q + + T V +F L+ + L +A L
Sbjct: 66 AVDPENATCPPQQPAPAEPMQQQHHRYTLSADVLFAFDRSSEQDLQPRGREELTELAAQL 125
Query: 104 NKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
F I + HTD +G+ N +SQ+RA+ ++ YL + I G P
Sbjct: 126 RNFEQLNSITVIGHTDYLGSDAYNQNLSQQRAETVRRYLAAQ-GLPADKIRAVGMGESQP 184
Query: 163 IDTNDTKVGRQN-------NQRIEIQI 182
+ D GR N+R+EIQ+
Sbjct: 185 VKQCDNHGGRSQLIACLQPNRRVEIQV 211
>gi|91785192|ref|YP_560398.1| OmpA family outer membrane protein [Burkholderia xenovorans LB400]
gi|91689146|gb|ABE32346.1| outer membrane protein, OmpA family [Burkholderia xenovorans LB400]
Length = 267
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 1/113 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
L L + + +TD+ G+ +NL +SQ
Sbjct: 156 LLLQGNANFATDSAVLSPIAKKNLDDFMRANQGVNLHRVMVVGYTDATGSEAHNLNLSQA 215
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA + YL RG P+ +N T GR N+R+++++
Sbjct: 216 RAAAVVQYLRDG-GLRAEQFVARGLGSADPVASNATAEGRMQNRRVDVRVLAE 267
>gi|15594512|ref|NP_212301.1| outer membrane protein (tpn50) [Borrelia burgdorferi B31]
gi|216264209|ref|ZP_03436201.1| outer membrane protein [Borrelia burgdorferi 156a]
gi|2688065|gb|AAC66563.1| outer membrane protein (tpn50) [Borrelia burgdorferi B31]
gi|215980682|gb|EEC21489.1| outer membrane protein [Borrelia burgdorferi 156a]
Length = 389
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I V + I + S L+K++ + LIA +L KF I I+ HT+
Sbjct: 267 KAIEVEKNNKGINLSFDIEFYPNSFQILQKEYKKI-DLIAKLLEKFKKNNILIEGHTEQF 325
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + +S++RA I +YLI+ V I +G+ + P + + + N+R+EI
Sbjct: 326 GLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEI 384
Query: 181 QIFPR 185
I
Sbjct: 385 TILNN 389
>gi|114321978|ref|YP_743661.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114228372|gb|ABI58171.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 362
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 14/156 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ + + L + GD + + L + L+ +A
Sbjct: 210 QELARYRSEFFGRLREVL-GDHPDIRIEGDRFLFQ-SELLFATASADLGGEGREQLEGLA 267
Query: 101 TILNKFP-------STVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSN 149
T L++ V+ ++ HTD +N +S RA I YL+ +
Sbjct: 268 TTLHELRGRIPDDLDWVLQVEGHTDRRPIRTAEFPSNWELSTARAQTIVRYLMDQ-GIPP 326
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ GFA +P+D DT N+RIE+++ R
Sbjct: 327 ERLAAAGFAEYHPVDDRDTPEAWARNRRIELRLTNR 362
>gi|312116065|ref|YP_004013661.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
gi|311221194|gb|ADP72562.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
Length = 339
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 64/192 (33%), Gaps = 23/192 (11%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM----------QLQDTGIV 64
++ + + K + +R +L K E +
Sbjct: 150 LAALENSLGDSDKRDKQAQAQISDLGQRLNVALAKRVQELSQYRSTFFGELKKSLGDRDD 209
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-------TVIAIQSHT 117
+ +GD L L + T L + V+ I HT
Sbjct: 210 IQVVGDRFVFQ-SEIFFDSGSADLSPLGYAELDKLGTALRDLENKIPRDINWVLRIDGHT 268
Query: 118 DSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
D ++N +S +RA + YL+ +GV NR ++ GF P+ + T +
Sbjct: 269 DVRPIATAAFRSNWELSSQRAISVVKYLVSKGVPPNRLVAA-GFGEYQPLTSGYTDADLR 327
Query: 174 NNQRIEIQIFPR 185
N+RIE+++ +
Sbjct: 328 RNRRIELKLTEK 339
>gi|254467364|ref|ZP_05080775.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
gi|206688272|gb|EDZ48754.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
Length = 209
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 63/176 (35%), Gaps = 16/176 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ + ++ T + C ++ + N + ++ ++ +Q
Sbjct: 1 MIRTAAILGLLLTAAAC-------EREAGRELNRGGTFGEATLNNAAVMSNDRSFAIQLA 53
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G + IT L++ +L A + +FP + HTD++G
Sbjct: 54 GRFAQEVPTTIT-------FDFDSAQLDQTARAVLDQQAHWIRQFPEVRFRVFGHTDAVG 106
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N + RA +YL+ RG+S +R +V P+ T + N+R
Sbjct: 107 SDAYNRALGLRRARAAVNYLVSRGISRSRLEAVISHGETQPLIP--TPERERRNRR 160
>gi|218886501|ref|YP_002435822.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218757455|gb|ACL08354.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 194
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/194 (12%), Positives = 55/194 (28%), Gaps = 14/194 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKS-------NDTDIVNKRFGSSLDKAEDEF 54
++ L + + + C + + + + D
Sbjct: 1 MRTLFSILLLCLVLGACAPKTTVVLVPDDDGGVGRVVVRAGGAEQSLAAANESTQVTDRP 60
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVH------VSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ R+ +P E P L A +
Sbjct: 61 APPRVMPQQEIDRVFGSTLAAMPEPPKSFLLYFPTGSTEPEPTSRPALDEAADNIKCRAV 120
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ +++ H+DS G N +S RA+ ++ ++ +++ G P+
Sbjct: 121 SNVSVIGHSDSAGDPAANQKLSMARAEAVRRM-LEARGVPAGAMALSGHGANDPLVPTAP 179
Query: 169 KVGRQNNQRIEIQI 182
V N+R+EI +
Sbjct: 180 GVAEARNRRVEILV 193
>gi|163850073|ref|YP_001638116.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens
PA1]
gi|163661678|gb|ABY29045.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1]
Length = 468
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 10/145 (6%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLPMLQLIA 100
+ + +A + V R G+ + I + + K + L+ IA
Sbjct: 322 AEIARAVPSLPNGAPAPQVEVRRTGEGVLISITDEINYSMFGIGSAEPTPKVVKALERIA 381
Query: 101 TILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
ILN P + ++ HTD +N +S RA + L++ G+ R + G+
Sbjct: 382 KILNSRPG-RVVVRGHTDGRPFRSETYDNWRLSSARAQMASYMLVRGGLDEARIDRIEGY 440
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
A + P N+ K N+RIEI +
Sbjct: 441 ADRQPRIANNPKA--AENRRIEILL 463
>gi|325288156|ref|YP_004263946.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324323610|gb|ADY31075.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 638
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 5/126 (3%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + ++ + + + + LQ + +L +FP T I I+SHTDS G
Sbjct: 513 IVKEDNVEKINVEPIYFDYDKYDITPRAEIELQKVLFVLKEFPKTKIKIESHTDSRGKDA 572
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIE 179
NL +S RA + YL+ +GV +R S GF + ++ N+R +
Sbjct: 573 YNLELSDNRAKSTRRYLVSKGVDIDRIESANGFGELKLKNKCSNGVKCSEQEHLVNRRSD 632
Query: 180 IQIFPR 185
I +
Sbjct: 633 FIIVAK 638
>gi|227823348|ref|YP_002827320.1| hypothetical protein NGR_c28210 [Sinorhizobium fredii NGR234]
gi|227342349|gb|ACP26567.1| flagellar motor protein [Sinorhizobium fredii NGR234]
Length = 343
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + L + + +AT L + P +
Sbjct: 205 EILSDRENIRIVGDRFVFQ-SEVLFSSGSNDLNPEGQGEMAKLATALLDLAKEIPAEINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G +N +S RA + +LI RGV ++R ++ GF PI
Sbjct: 264 VLRVDGHTDNVPLSGTGRFADNWELSSARATSVVKFLISRGVPADRLVAA-GFGEYQPIA 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
++ R N+RIE+++ +
Sbjct: 323 VGESLEARAQNRRIELKLTEK 343
>gi|78777214|ref|YP_393529.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
gi|78497754|gb|ABB44294.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
Length = 240
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 9/176 (5%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ S + ++ + E + Q + + D +P + F
Sbjct: 52 STPIESTDETSEQVNRISAALKEMNEIQEAQASTQGSAAVVSLEEAQDGFVIELPASLLF 111
Query: 83 VSEVFL--EKKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGT-----LKNNLLISQERA 134
+ + L L+ +A I+ + P+ T +++ HTD G K+N +S RA
Sbjct: 112 KPGSAVIQNEDSLLFLKRVALIIGELPNETTLSVCGHTDDQGPSVKGPYKDNWELSSARA 171
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ L+ GV R IS G+A P TN T+ GR+ N+R+E++ + N K
Sbjct: 172 ISVLQELLLDGVDPKR-ISAAGYAEFSPKATNATESGREQNRRVELRFYAGKNADK 226
>gi|225010858|ref|ZP_03701326.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-3C]
gi|225005066|gb|EEG43020.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-3C]
Length = 277
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 10/133 (7%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L D I +S ++ I + F + K +L+ +A ++N P ++ H
Sbjct: 132 LDDEDIEISVEKGVVFVSISDKLLFNTGSYVVSNKAKSVLEKVAKVVNNKPDFEFMVEGH 191
Query: 117 T----DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
T S G L +N +S +RA + L + + ++ G A P+ + +
Sbjct: 192 TDERSFSKGDLVDNWDLSVKRATSVVRMLQKDFGVDPKRMTAAGRAEYMPVSSELS---- 247
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 248 -KNRRTRIVVLPK 259
>gi|207722387|ref|YP_002252823.1| outer membrane protein [Ralstonia solanacearum MolK2]
gi|206587566|emb|CAQ18148.1| outer membrane protein [Ralstonia solanacearum MolK2]
Length = 215
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + I+ + ++ L+ + +L+ +A
Sbjct: 56 QMEAQRRKTLEQALAGPLAAGRVTLVNGRIGIS---GSVLFALNSDQLQPEGRELLKSLA 112
Query: 101 TILNKF---PSTVIAIQSH------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L+ + ++ + +N +S +RA + LI G+
Sbjct: 113 GPLSAYLQSRDEILMVSGFADDQQVHAGNRRFADNWELSAKRALTVTRALIDAGIPGASV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+ +N GR N+R+EI PR
Sbjct: 173 FAAA-FGSEQPVSSNADDEGRAKNRRVEIAPVPR 205
>gi|167589926|ref|ZP_02382314.1| hypothetical protein BuboB_31618 [Burkholderia ubonensis Bu]
Length = 215
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 55/156 (35%), Gaps = 13/156 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ E L + + I + ++ L+ + +L+ +A
Sbjct: 55 QQEAQQRKTLERALAGPLAAGRVTLVNGRIGI---AGNVLFALNSDQLQPEGKELLKTLA 111
Query: 101 TILNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRF 151
L+ + ++ I D +N +S +RA + I GV +
Sbjct: 112 GPLSAYLKTRDEILMISGFADDQQVHAGNRLFADNWELSAKRALTVTRAFIDAGVPAASV 171
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ F + P+ +N GR N+R+EI PR +
Sbjct: 172 FAAA-FGSEQPVSSNADDAGRAKNRRVEIAPVPRKS 206
>gi|152980650|ref|YP_001353771.1| flagellar motor protein MotD [Janthinobacterium sp. Marseille]
gi|151280727|gb|ABR89137.1| MotB chemotaxis protein [Janthinobacterium sp. Marseille]
Length = 259
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ + V++ ++ I V F E L + L+ +A +L
Sbjct: 109 KAMAPLVSQGKVRVTQTNRGVSVEINASVLFAPGEAKLNAQSEAALRAVAQVLKDV-DND 167
Query: 111 IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
I ++ HTD+ +N +S RA + + GV+ R + G P+D+N
Sbjct: 168 IQVEGHTDNTPINNTMFPSNWELSAVRASSVVRLFLANGVAEKRLV-AMGHGANLPVDSN 226
Query: 167 DTKVGRQNNQRIEIQIFP 184
DT GR N+R+++ I
Sbjct: 227 DTTEGRLRNRRVQLMILS 244
>gi|288958638|ref|YP_003448979.1| ompA-family protein [Azospirillum sp. B510]
gi|288910946|dbj|BAI72435.1| ompA-family protein [Azospirillum sp. B510]
Length = 502
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 59/148 (39%), Gaps = 11/148 (7%)
Query: 47 LDKAEDEFQMQLQDTGIVVSR-IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
+++ ++ + VS + ++V +E +++ + + +A L
Sbjct: 356 VERVTLALAADIRAGLVEVSGGTDGRVLVRTRLNVFASGSDRIEPRYVELFRHVAEALRP 415
Query: 106 FPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGV-----SSNRFISVRG 156
I++ +TDS+ ++N +S+ RA ++ + +S G
Sbjct: 416 EQG-RISVIGNTDSVAIRSTRYRSNQELSEARAFRVQRLMTDILGKDAGRDGGSRLSAEG 474
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
PI N T GRQ N+R++I + P
Sbjct: 475 RGDGDPIAPNTTAEGRQANRRVDIVLVP 502
>gi|27376621|ref|NP_768150.1| hypothetical protein bll1510 [Bradyrhizobium japonicum USDA 110]
gi|27349762|dbj|BAC46775.1| flagellar motor protein [Bradyrhizobium japonicum USDA 110]
Length = 342
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---T 109
+ + +GD + L + L +A L K P+
Sbjct: 205 AILGNRPDIRVVGDRFVFQ-SEVFFDTGQATLLPEGRAELDTVANALIELDKKIPAEIAW 263
Query: 110 VIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
V+ + HTD K+N +S RA + YLI GV + R ++ GF P+DT
Sbjct: 264 VLRVDGHTDVRPVSGASFKSNWDLSAARAISVVQYLISLGVPAQRLVAA-GFGEFQPLDT 322
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
+T+ + N+RIE+++ R
Sbjct: 323 ANTEDAYKRNRRIELKLTER 342
>gi|319427140|gb|ADV55214.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 197
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 45/100 (45%)
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
++ L L+ L + + HTD +GT + N +S +RA+ ++ L++
Sbjct: 98 AEVDLSQWKSLALVKAFLEANNDVALILVGHTDIVGTPEFNYQLSLQRAENVRRILVEDY 157
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ ++ G P+ N + GR+ N+R++ + +
Sbjct: 158 GFNPNRFTIVGKGISEPVADNRSSEGRRLNRRVQFIVNNK 197
>gi|167565907|ref|ZP_02358823.1| hypothetical protein BoklE_25339 [Burkholderia oklahomensis EO147]
Length = 215
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + I+ + ++ L+ +L+ +A
Sbjct: 56 QMETQRRKTLEQALAGPLAAGRVTLVNGRIGIS---GSVLFALNSDELQPAGRDLLKSLA 112
Query: 101 TILNKF---PSTVIAIQSHTDSI------GTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L + ++ + D +N +S +RA + I GV ++
Sbjct: 113 GPLAAYLKANREILMVSGFADDQQVRAGNHRFADNWELSAKRALTVTRAFIAEGVPASSV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+ N GR N+R+EI PR
Sbjct: 173 FAAA-FGSEQPVSPNSDDEGRAKNRRVEIAPVPR 205
>gi|144898731|emb|CAM75595.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Magnetospirillum gryphiswaldense MSR-1]
Length = 174
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 17/170 (10%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE--DEFQMQLQDTGIVVSRIGDMITCY 75
C +++ V SN V + G+ + +AE + Q + Q + +GD +
Sbjct: 20 CSDQAQQSGGVTGSGSNTGGGVARPSGNVMSEAERLAQMQREFQ------TSVGDRV--- 70
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
L L A L ++P+ ++ I+ H D GT + NL + RA
Sbjct: 71 ----YYGTDSHSLNADAKATLDRQAAFLRRYPTVMLRIEGHADERGTREYNLALGDRRAQ 126
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+K YL+ + ++ +S F + P + N+R I + +
Sbjct: 127 SVKEYLLAQ-GVASGRLSTSTFGKERPEANGANEQAWAQNRRA-ISVIAQ 174
>gi|91762267|ref|ZP_01264232.1| OmpA family protein [Candidatus Pelagibacter ubique HTCC1002]
gi|91718069|gb|EAS84719.1| OmpA family protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 180
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 57/178 (32%), Gaps = 32/178 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L + + + + Q+Q
Sbjct: 27 ILKNGFLIILASLVL------------------------------TACATKKTTTGQMQG 56
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + + +P V F + L L+ A L K + ++ H D
Sbjct: 57 DVYTGTDSVEYLASGVPDRVFFATNETVLTTASRETLRKQAAWLRKNSDINVVLEGHADE 116
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + NL + + RA+ K + S+ ISV + + P+D+ + N+R
Sbjct: 117 RGTREYNLALGERRANSAKD-YLMTYGISSERISVLSYGKERPVDSGSNPLAWSKNRR 173
>gi|83592409|ref|YP_426161.1| hypothetical protein Rru_A1073 [Rhodospirillum rubrum ATCC 11170]
gi|83575323|gb|ABC21874.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
Length = 375
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 63/178 (35%), Gaps = 17/178 (9%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGS---SLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
++ +K + + + ++ + + L V +GD
Sbjct: 198 ARSAEQKVVIADLGTRLNAALAEKVQELQRYRSEFFGRLREVL-GAREDVRIVGDRFVFQ 256
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDSIGT----LK 124
+ L+ L +AT L ++ + HTD +
Sbjct: 257 -SEVLFPSGSSQLQPAGQDTLASLATTLMAIAARIPGDVDWILRVDGHTDRRPINTAAFQ 315
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S RA + ++LI+RGV R ++ GF PID + N+RIE+++
Sbjct: 316 SNWQLSAARAISVVNFLIERGVPPER-LAAAGFGEYQPIDPGQSDEALARNRRIELKL 372
>gi|146293768|ref|YP_001184192.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|145565458|gb|ABP76393.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
Length = 196
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 45/100 (45%)
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
++ L L+ L + + HTD +GT + N +S +RA+ ++ L++
Sbjct: 97 AEVDLSQWKSLALVKAFLEANNDVALILVGHTDIVGTPEFNYQLSLQRAENVRRILVEDY 156
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ ++ G P+ N + GR+ N+R++ + +
Sbjct: 157 GFNPNRFTIVGKGISEPVADNRSSEGRRLNRRVQFIVNNK 196
>gi|323698017|ref|ZP_08109929.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323457949|gb|EGB13814.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 240
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 62/200 (31%), Gaps = 22/200 (11%)
Query: 5 LGLSMFIMTTISGCGLASREKKK------VFLHKSNDTD-----------IVNKRFGSSL 47
L + MF++ + ++++ K G S
Sbjct: 37 LMMVMFVLFVVLFIYTSTKQDVKILFSRQSAEKAQAAGALDPLMGLIGQIASRADTGGSR 96
Query: 48 DKAEDEFQMQL---QDTGIVVSRIG-DMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATI 102
D + L + GI V R + + + F L+ + L I +
Sbjct: 97 DVVRMAEKEVLYRSRTNGITVVREAPGRVRVTLRGDLFFDGNSGRLKPESAAYLDEIGDV 156
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ V I S ++ +S ERA + LI R + + + G P
Sbjct: 157 VRLSVGLVHVIGFADQSEAEGSSSFTLSSERAASVADQLITRLGIEPKRLVITGRGAYQP 216
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
+ + + N+R+EI I
Sbjct: 217 ELPDTSAANQTLNRRVEIVI 236
>gi|153836574|ref|ZP_01989241.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|149750172|gb|EDM60917.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
Length = 284
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 12/149 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + L T D + + + + + K++
Sbjct: 106 LNQLEQQLDYVLTQTACTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPKYMGH 165
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L A IL P+ + + H D GT ++N ++QERA+ +K + ++ + +
Sbjct: 166 LAEAAYILRDHPALSLVVTGHADVTGTPEHNKKLAQERAEQVKR-YLSVFGVTSDRVQTK 224
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ T R N+R+ I++
Sbjct: 225 SVGDTLPLYEGQTPAVRLTNRRVSIEVLS 253
>gi|297560820|ref|YP_003679794.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296845268|gb|ADH67288.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 477
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 56/172 (32%), Gaps = 11/172 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ---LQDTGIVVSRIGDMITCY 75
+ DT V R + ED + ++D+ + D T
Sbjct: 124 AEPPGDSVDPSDINPGDTVAVPLREAEMTSEPEDYARDLYSIIEDSSRTRTSTTDEETIG 183
Query: 76 IPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTV---IAIQSHTDSIGTLKNNLLISQ 131
+ V F E L + +L + + I + HTD G+ N +S+
Sbjct: 184 LHADVLFDFDEATLTPEAEDVLAEVVQETRENADPSRPPIRVVGHTDGRGSEDYNQDLSE 243
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN---DTKVGRQNNQRIEI 180
RA + L + + G + P+ D + R N+R+EI
Sbjct: 244 RRAQAVLDVLEEGLG-TEYEYETEGRGAEEPLVEEGGADDEEARATNRRVEI 294
>gi|120598160|ref|YP_962734.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|120558253|gb|ABM24180.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
Length = 196
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 45/100 (45%)
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
++ L L+ L + + HTD +GT + N +S +RA+ ++ L++
Sbjct: 97 AEVDLSQWKSLALVKAFLEANNDVALLLVGHTDIVGTPEFNYQLSLQRAENVRRILVEDY 156
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ ++ G P+ N + GR+ N+R++ + +
Sbjct: 157 GFNPNRFTIVGKGISEPVADNRSSEGRRLNRRVQFIVNNK 196
>gi|259417800|ref|ZP_05741719.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259346706|gb|EEW58520.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 345
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 66/172 (38%), Gaps = 7/172 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
S + DT + D AE + G ++ +
Sbjct: 174 SQSLRPSGGPSNGGRDTSDGAELGSDVTDAAEQALLVDAIKKGGSLTTGAIRDLLLLQGR 233
Query: 80 V------SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
V + + + L+ +A L++ S I + HTD++G L+ N+ +S+ R
Sbjct: 234 VPLLDLEFDTASTQMGEGPFDSLRQLAEFLDQNKSATILLVGHTDTVGGLEGNIALSRRR 293
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE-IQIFP 184
A ++ L R I V G Y P+ N T+ GR+ N+R+E + + P
Sbjct: 294 AISVRERLTTRYGIDGGRIQVAGAGYMAPLAPNTTETGRETNRRVEAVLVMP 345
>gi|332702472|ref|ZP_08422560.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332552621|gb|EGJ49665.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 239
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 71/213 (33%), Gaps = 29/213 (13%)
Query: 1 MIKELGLSMFIMTT------------ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD 48
M+ L L F++ I+G + + + + ++L+
Sbjct: 30 MM-TLLLCFFVLLASISQVDYTLFDEIAGSMQTALKPSEARKSDLREAVTRELDRQATLE 88
Query: 49 KAEDEFQMQLQDTG---IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILN 104
+ Q + + + + + F L + ML+ I +L
Sbjct: 89 HIISDLQQRFRGEAAEHVQFQLRPGAVAINLHGPAFFDSGSAELTPDAVRMLRKIGVVLV 148
Query: 105 KFPSTVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
P + ++ HTD G +N +S RA + +LI + + + G A
Sbjct: 149 GVP-YHLTVEGHTDNVPIQTGAFDSNWELSALRATRVARFLISQ-GVRPDNMKIVGLADT 206
Query: 161 YPIDTNDTKVGRQ------NNQRIEIQIFPRGN 187
P+ N+ G N+R+ I + P GN
Sbjct: 207 RPLLPNNDASGAALPENQTRNRRVVILVAPEGN 239
>gi|330949998|gb|EGH50258.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 300
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L + L P+ I + H+D+ G N +S+
Sbjct: 171 IKQAEVGFPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + Y + + I++R +YP+ N + R N+R+ + +
Sbjct: 231 RALAVMDYFKAQ-GIPEQQITLRFHGERYPLAPNTNEANRARNRRVNVHL 279
>gi|312129756|ref|YP_003997096.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311906302|gb|ADQ16743.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 800
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ S+ + L + + P+ I I HT+ G + N+ +S+ RA
Sbjct: 696 LTGVNFEQSQTTMLPGSEDKLAEVLQFMKDHPNVKIEIIGHTEKAGDERQNVRLSEFRAR 755
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + + ++ I+ G PID ND N+RIE+++
Sbjct: 756 TVAN-WLFNKGIASSRITTAGKGSAEPIDPNDA----AVNRRIEVKVVEE 800
>gi|260769061|ref|ZP_05877995.1| sodium-type flagellar protein MotY precursor [Vibrio furnissii CIP
102972]
gi|260617091|gb|EEX42276.1| sodium-type flagellar protein MotY precursor [Vibrio furnissii CIP
102972]
Length = 294
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
V L K L IA + P ++ + ++TDS + +S +RA+ ++ Y
Sbjct: 191 DSVELNKASQKRLAQIAEYIRYNPDIDLVLVSTYTDSTDGRNESQSLSDKRAESLQKYFE 250
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 251 SL-GLPSDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|332292958|ref|YP_004431567.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332171044|gb|AEE20299.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 640
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
G+ + + +L + + G++ I + + LQ I
Sbjct: 491 NTGTEPNGLINFVDFKLANLSDIFVTDGEIEKIKINPINFESNRYAINIFAAQQLQRIID 550
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
I+N++P+ +I I+SHTD G N +S+ RA + YLI+ G++S+R S +GF
Sbjct: 551 IMNEYPALIIKIESHTDQRGGASYNQTLSENRATSTRDYLIKNGITSSRIESAKGFGESR 610
Query: 162 PI------DTNDTKVGRQNNQRIEIQIFPR 185
PI D + T+V N+R + + R
Sbjct: 611 PIHICDEADDSCTEVQYLENRRSDFIVVSR 640
>gi|218675305|ref|ZP_03524974.1| hypothetical conserved membrane protein [Rhizobium etli GR56]
Length = 206
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 56/165 (33%), Gaps = 3/165 (1%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G AS +T + G T ++ D
Sbjct: 42 GSTQASSNPDASANPAKEETVEASPTSGQGPAATSPTTAAATITTPQTYWKLPDDDQVNY 101
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V +F + + PMLQ + +++ + +I I HTD+ G + N +S RA
Sbjct: 102 RVQFAF-DSSAIAPEQKPMLQKLCSVVKEMDIKLIRIVGHTDASGGARYNQNLSTLRARE 160
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + + G ++P+D K N+R+E Q
Sbjct: 161 VARFFTEDCHIPRERLEAVGVGEQFPLDPQTPKAD--ENRRVEFQ 203
>gi|209519379|ref|ZP_03268177.1| OmpA/MotB domain protein [Burkholderia sp. H160]
gi|209500193|gb|EEA00251.1| OmpA/MotB domain protein [Burkholderia sp. H160]
Length = 217
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + I+ + ++ L+ + +L+ +A
Sbjct: 56 QAETQRRKTLEQALAGPLAAGRVTLVNGRIGIS---GNVLFALNSAQLQPEGRALLKSLA 112
Query: 101 TILNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRF 151
L+ + ++ + TD + +N +S +RA + LI GV ++
Sbjct: 113 GPLSAYLRASDQILMVSGFTDDQRLREGNRRFADNWELSAQRALTVTRALIDEGVPASSV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+ +N + GR N+R+EI PR
Sbjct: 173 FAAA-FGSEQPVSSNADEPGRAKNRRVEIAPVPR 205
>gi|89255762|ref|YP_513124.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
holarctica LVS]
gi|115314256|ref|YP_762979.1| OmpA family protein [Francisella tularensis subsp. holarctica
OSU18]
gi|169656514|ref|YP_001427790.2| OmpA family peptidoglycan-associated lipoprotein [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|254367132|ref|ZP_04983165.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
holarctica 257]
gi|89143593|emb|CAJ78776.1| Peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
holarctica LVS]
gi|115129155|gb|ABI82342.1| probable OmpA family protein [Francisella tularensis subsp.
holarctica OSU18]
gi|134252955|gb|EBA52049.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
holarctica 257]
gi|164551582|gb|ABU60834.2| peptidoglycan-associated lipoprotein, OmpA family [Francisella
tularensis subsp. holarctica FTNF002-00]
Length = 207
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 65/202 (32%), Gaps = 28/202 (13%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ +++ + M ++ C + + K D SS + +
Sbjct: 1 MMKKRIMNLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSS----QIYGSDK 56
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L + +++ + L A L P I + +T
Sbjct: 57 LSSDQVE-QMKKELMNINCRSVYFGFDSYNIIDDAKECLDKTADYLIAHPDQPIKLSGNT 115
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT------------ 165
D G+ K N + Q+RA+ + +YL+ + + I V + P
Sbjct: 116 DPRGSEKYNFNLGQKRAEAVYNYLLGK-NVNKDQICVVSYGKLKPAAEPTQFYDEFCKDG 174
Query: 166 -ND------TKVGRQNNQRIEI 180
ND ++ ++R EI
Sbjct: 175 VNDACMYKASEKAFYLDRRTEI 196
>gi|218528676|ref|YP_002419492.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
gi|218520979|gb|ACK81564.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
Length = 462
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 10/145 (6%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLPMLQLIA 100
+ + +A + V R G+ + I + + K + L+ IA
Sbjct: 316 AEIARAVPSLPNGAPAPQVEVRRTGEGVLISITDEINYSMFGIGSAEPTPKVVKALERIA 375
Query: 101 TILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
ILN P + ++ HTD +N +S RA + L++ G+ R + G+
Sbjct: 376 KILNSRPG-RVVVRGHTDGRPFRSETYDNWRLSSARAQMASYMLVRGGLDEARIDRIEGY 434
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
A + P N+ K N+RIEI +
Sbjct: 435 ADRQPRIANNPKA--AENRRIEILL 457
>gi|330937557|gb|EGH41498.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 221
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L + L P+ I + H+D+ G N +S+
Sbjct: 92 IKQAEVGFPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDNSGNRLTNRDLSRR 151
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + Y + + I++R +YP+ N + R N+R+ + +
Sbjct: 152 RALAVMDYFKAQ-GIPEQQITLRFHGERYPLAPNTNEANRARNRRVNVHL 200
>gi|283851028|ref|ZP_06368313.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
gi|283573674|gb|EFC21649.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
Length = 263
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 41/124 (33%), Gaps = 5/124 (4%)
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI--- 120
VS + + V F L +L +A IL F + ++ H D
Sbjct: 128 VSNDSSGVLMQVNNSVMFRTGSAELTPAAAKVLDGVARILQDFK-INLTVRGHADDEEKG 186
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + +S RA YL ++ + G A P+ + + N+RIE
Sbjct: 187 GPYPSKWELSAARAAAATRYLAEKTGIPTTRLRAVGLADSQPLVPPTSAENKARNRRIEF 246
Query: 181 QIFP 184
Sbjct: 247 FYTS 250
>gi|254461268|ref|ZP_05074684.1| flagellar motor protein [Rhodobacterales bacterium HTCC2083]
gi|206677857|gb|EDZ42344.1| flagellar motor protein [Rhodobacteraceae bacterium HTCC2083]
Length = 760
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 58/175 (33%), Gaps = 14/175 (8%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
++K ++ K + + L V GD +
Sbjct: 588 EAERKRLEVEALALQEQTKDLERYRSEFFGRLRDVL-GRQDGVRIEGDRFVFS-SEVLFP 645
Query: 83 VSEVFLEKKFL-------PMLQLIATILNKFPSTVIAIQSHTDSI-----GTLKNNLLIS 130
L + +L +A + +I + HTD++ G +N +S
Sbjct: 646 PGRAALSPEGRGEVAKVASILLAVADDIPDGIDWIIRVDGHTDNVPLSGLGEFADNWELS 705
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
Q RA + Y++ ++ GF P++ D+ R N+RIE++ +
Sbjct: 706 QARALSVVKYMVNFLGIQPTRLAANGFGQFQPVNLEDSDEARAQNRRIELKFTEK 760
>gi|167009214|ref|ZP_02274145.1| probable OmpA family protein [Francisella tularensis subsp.
holarctica FSC200]
Length = 206
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 61/201 (30%), Gaps = 27/201 (13%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + + M ++ C + + K D SS + +L
Sbjct: 1 MKKRIMNLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSS----QIYGSDKL 56
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ +++ + L A L P I + +TD
Sbjct: 57 SSDQVE-QMKKELMNINCRSVYFGFDSYNIIDDAKECLDKTADYLIAHPDQPIKLSGNTD 115
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT------------- 165
G+ K N + Q+RA+ + +YL+ + + I V + P
Sbjct: 116 PRGSEKYNFNLGQKRAEAVYNYLLGK-NVNKDQICVVSYGKLKPAAEPTQFYDEFCKDGV 174
Query: 166 ND------TKVGRQNNQRIEI 180
ND ++ ++R EI
Sbjct: 175 NDACMYKASEKAFYLDRRTEI 195
>gi|300698137|ref|YP_003748798.1| transmembrane protein, OmpA/MotB motif [Ralstonia solanacearum
CFBP2957]
gi|299074861|emb|CBJ54429.1| putative transmembrane protein, OmpA/MotB motif [Ralstonia
solanacearum CFBP2957]
Length = 215
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + I+ + ++ L+ + +L+ +A
Sbjct: 56 QMEAQRRKTLEQALAGPLAAGRVTLVNGRIGIS---GSVLFALNSDQLQPEGRELLKSLA 112
Query: 101 TILNKF---PSTVIAIQSH------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L+ + ++ + +N +S +RA + LI G+
Sbjct: 113 GPLSAYLQSRDEILMVSGFADDQQVHAGNRRFADNWELSAKRALTVTRALIDAGIPGASV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+ +N GR N+R+EI PR
Sbjct: 173 FAAA-FGSEQPVGSNADDEGRAKNRRVEIAPVPR 205
>gi|262376326|ref|ZP_06069556.1| predicted protein [Acinetobacter lwoffii SH145]
gi|262308927|gb|EEY90060.1| predicted protein [Acinetobacter lwoffii SH145]
Length = 492
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 60/159 (37%), Gaps = 4/159 (2%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K + + ++ +AE D V + + + +
Sbjct: 318 AKNVTVVTQQPLNRSDVINTANSEAEQALASIKTDN---VKALDVATALNLQIINFDTAS 374
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
+ + +L A +L + P ++ + H D+ G+ N ++S +RA I SYL+ +
Sbjct: 375 TEVPEVNKLVLDQAAALLQRAPHVILKVTGHADAQGSEAENKVLSVQRAQAITSYLVGK- 433
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ + G P++ N T G+ N+R+ ++
Sbjct: 434 GVNPAQLQAVGMGEDQPVEPNATPAGQFQNRRVTFEVVN 472
>gi|261880624|ref|ZP_06007051.1| immunogenic lipoprotein PG3 [Prevotella bergensis DSM 17361]
gi|270332665|gb|EFA43451.1| immunogenic lipoprotein PG3 [Prevotella bergensis DSM 17361]
Length = 222
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 77/210 (36%), Gaps = 33/210 (15%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS---------------- 45
+K ++ + ++ C +++ + L + ++ G
Sbjct: 1 MKSFKIATMGLCMLAVCSCSTK-QGTGTLIGTGAGTVLGGIIGKISGNTAVGAAIGGAVG 59
Query: 46 ---------SLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSFV-SEVFLEKKF 92
+DK E Q+++ + + + + F ++ L
Sbjct: 60 AGTGALIGKHMDKVAAETAAQVKNAKVEEVTDANGLKAVKVTFDSGILFDLNQATLNSSS 119
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L + +L + S + I +TD G N+ +SQ+RA + +YL GVS+ +
Sbjct: 120 KKELAKFSNVLKENSSCHVDIYGYTDRSGNDAINVPLSQKRAQSVANYLSSCGVSNTQMQ 179
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+V G + I + K + N+R+E+ +
Sbjct: 180 NVVGKGSQDEI---ENKRVSKVNRRVEVYL 206
>gi|257459073|ref|ZP_05624192.1| OmpA family protein [Campylobacter gracilis RM3268]
gi|257443458|gb|EEV18582.1| OmpA family protein [Campylobacter gracilis RM3268]
Length = 157
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 60/185 (32%), Gaps = 34/185 (18%)
Query: 2 IKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K L LS +SGC + E ++ + + S
Sbjct: 1 MKHLVLSSIAVAALLLSGCSKKTPEADTTSTSGADRLAALASQIQSE------------- 47
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHT 117
+ + + + A + N+ S + ++ +
Sbjct: 48 ----------------VGTVYFDFDKFNIRADQQGTINNNAALFNQAGAESLTVKVEGNC 91
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G+ + N + +RA K L+ +GV+ +R ISV + T +K N+R
Sbjct: 92 DEWGSDEYNYALGLKRATAAKDALVAQGVNESR-ISVVSYGESNMACTEHSKECDAQNRR 150
Query: 178 IEIQI 182
E ++
Sbjct: 151 DEFKV 155
>gi|34495565|ref|NP_899780.1| peptidoglycan-associated lipoprotein [Chromobacterium violaceum
ATCC 12472]
gi|34101420|gb|AAQ57789.1| peptidoglycan-associated lipoprotein [Chromobacterium violaceum
ATCC 12472]
Length = 172
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 47/165 (28%), Gaps = 16/165 (9%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD-MITCYI 76
C + T GS + + + D
Sbjct: 19 CASTKPAETPAAPVTQAPTTQAPVTSGSE-------------QNQVAMDPLNDPNSPLAK 65
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + A L + IQ +TD+ G+ + NL + Q RA+
Sbjct: 66 RSVYFAFDSSAVDGEGKTTVANHADYLKGH-DKKVIIQGNTDARGSREYNLALGQRRAES 124
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + ++ + F + P T + N+R +I
Sbjct: 125 V-KHAMEVLGVKESQLEAVSFGKEKPKATGHSDADYAENRRADIV 168
>gi|238786643|ref|ZP_04630444.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia frederiksenii ATCC 33641]
gi|238725011|gb|EEQ16650.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia frederiksenii ATCC 33641]
Length = 168
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 53/179 (29%), Gaps = 27/179 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + ++GC + E LQ+ G
Sbjct: 15 LSFFAICLLVLTGCQAKPQ-------------------------GLTPEQIAALQEQGFK 49
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
++ G + L +Q I L+ + + HTD+ G
Sbjct: 50 LTDNGWEFGLT-NKVLFDSDVRKLNSSGTQTVQNIGQALHNVGINHLRVDGHTDATGEDS 108
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S ERA + L I VRG P+ N + GR N+R+ + +
Sbjct: 109 YNQKLSYERAAAVADSLAT-IGIPRTNIDVRGRGKLEPVADNRSAKGRAENRRVAMIVT 166
>gi|167572993|ref|ZP_02365867.1| hypothetical protein BoklC_24368 [Burkholderia oklahomensis C6786]
Length = 215
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + I+ + ++ L+ +L+ +A
Sbjct: 56 QMETQRRKTLEQALAGPLAAGRVTLVNGRIGIS---GSVLFALNSDELQPAGRDLLKSLA 112
Query: 101 TILNKF---PSTVIAIQSHTDSI------GTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L + ++ + D +N +S +RA + I GV ++
Sbjct: 113 GPLAAYLKANREILMVSGFADDQQVRAGNHRFADNWELSAKRALTVTRAFIAEGVPASSV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+ N GR N+R+EI PR
Sbjct: 173 FAAA-FGSEQPVSPNSDDEGRAKNRRVEIAPVPR 205
>gi|124002443|ref|ZP_01687296.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123992272|gb|EAY31640.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 756
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V ++ L+ KF+ L+ L K + +AI HTD +GT LL+SQ RA+
Sbjct: 649 SVAFFEYNKYELKDKFIKNLEPFIKYLQKNKNAELAIYGHTDQVGTAAACLLLSQRRANA 708
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-NQRIEIQIF 183
IK Y + R + + I+ +G+ PI N+ + N+RIE+ +
Sbjct: 709 IKQYFV-RHGVAAKRITAKGYGKAKPIWKNEKHDWQAKENRRIELLLL 755
>gi|187479386|ref|YP_787411.1| peptidoglycan-associated lipoprotein [Bordetella avium 197N]
gi|115423973|emb|CAJ50526.1| peptidoglycan-associated lipoprotein [Bordetella avium 197N]
Length = 165
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 1/114 (0%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
I + ++ +++ A L P I I+ +TD G + NL
Sbjct: 50 NPQSILAQQRSVYFDFDSYGVSDQYRGLVETHARYLASHPQQRIKIEGNTDDRGGAEYNL 109
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ Q RAD ++ + ++ I F + P T T+ N+R +I
Sbjct: 110 ALGQRRADAVRRMMTLL-GVADAQIEAISFGKEKPKATGSTEADFAENRRADIV 162
>gi|257456150|ref|ZP_05621347.1| OmpA family protein [Treponema vincentii ATCC 35580]
gi|257446236|gb|EEV21282.1| OmpA family protein [Treponema vincentii ATCC 35580]
Length = 1355
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLE-------KKFLPMLQLIATILNKFPSTVIAIQS 115
++V R GD + +P + + + + + +L IA ILNKFP + ++
Sbjct: 1223 VLVIRDGDKLKIAVPSIIFRKNAADFDGLEQNVVDRNIKVLTRIAEILNKFPEYKVQVEG 1282
Query: 116 HTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
H ++ ++ + +S RAD ++ +LI+RGVS +R SV G PI + K
Sbjct: 1283 HANNVSGTEREEKEDLIPLSAARADAVRRFLIERGVSRSRLSSV-GIGGTKPIASLSDKD 1341
Query: 171 GRQNNQRIEIQIF 183
N+R+E +
Sbjct: 1342 NWWKNRRVEFVLI 1354
>gi|315180802|gb|ADT87716.1| sodium-type flagellar protein MotY [Vibrio furnissii NCTC 11218]
Length = 294
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
V L K L IA + P ++ + ++TDS + +S +RA+ ++ Y
Sbjct: 191 DSVELNKASQKRLAQIAEYIRYNPDIDLVLVSTYTDSTDGRNESQSLSDKRAESLQKYFE 250
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 251 SL-GLPSDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|203284088|ref|YP_002221828.1| outer membrane protein [Borrelia duttonii Ly]
gi|201083531|gb|ACH93122.1| outer membrane protein [Borrelia duttonii Ly]
Length = 385
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Query: 48 DKAEDEFQMQLQDTGI---VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ E+E + ++ I + + + I + + + + +K L+ IA +L
Sbjct: 247 NTIENEIKEYIKREQIDSIEIEKNKNGIKLSLDIE-FYPDSFQIIRKEHNKLKHIANLLE 305
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
KF I I+ HT GT + +S++RA I +YL++ V + I +G+ K P
Sbjct: 306 KFQDNNILIEGHTAKFGTEQEMQELSEKRAHTIGNYLLKMKVKNKNQIFFKGWGAKKPKY 365
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
+ + + N+R+EI I
Sbjct: 366 VSSSPLA-SKNRRVEITILNN 385
>gi|58580251|ref|YP_199267.1| hypothetical protein XOO0628 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84622235|ref|YP_449607.1| hypothetical protein XOO_0578 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188574968|ref|YP_001911897.1| hypothetical protein PXO_04090 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58424845|gb|AAW73882.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84366175|dbj|BAE67333.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188519420|gb|ACD57365.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 224
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 13/149 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + + I + + L+ + +L+ +A
Sbjct: 56 QAEAQRRQTLEQALAAPLAAGRVTL--VDGRIGIR-GNVLFAFNSDELQPEGREVLKSLA 112
Query: 101 TILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L ++ ++ + TD +N +S +RA + LI GV ++
Sbjct: 113 APLAQYLRAREEILMVSGFTDDRPVLGGNRRYADNWELSAQRALTVTRALIAEGVPASSV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ F + P+D+N + R N+R+EI
Sbjct: 173 FAAA-FGSQQPVDSNADEARRAKNRRVEI 200
>gi|71083303|ref|YP_266022.1| OmpA family protein [Candidatus Pelagibacter ubique HTCC1062]
gi|71062416|gb|AAZ21419.1| OmpA family [Candidatus Pelagibacter ubique HTCC1062]
Length = 159
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 57/178 (32%), Gaps = 32/178 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L + + + + Q+Q
Sbjct: 6 ILKNGFLIILASLVL------------------------------TACATKKTTTGQMQG 35
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + + +P V F + L L+ A L K + ++ H D
Sbjct: 36 DVYTGTDSVEYLASGVPDRVFFATNETVLTTASRETLRKQAAWLRKNSDINVVLEGHADE 95
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + NL + + RA+ K + S+ ISV + + P+D+ + N+R
Sbjct: 96 RGTREYNLALGERRANSAKD-YLMTYGISSERISVLSYGKERPVDSGSNPLAWSKNRR 152
>gi|56697940|ref|YP_168311.1| peptidoglycan-associated lipoprotein [Ruegeria pomeroyi DSS-3]
gi|56679677|gb|AAV96343.1| peptidoglycan-associated lipoprotein [Ruegeria pomeroyi DSS-3]
Length = 181
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 59/178 (33%), Gaps = 21/178 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+M + ++ C + + S D + G D + Q +
Sbjct: 20 LAAMGALVALAAC----TNPEDLGDGNSVDLNGAGAGSGLVGDPTSPAYFSQAIGDRV-- 73
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ V + L + L A L I+ H D GT +
Sbjct: 74 --------------LFAVDQSTLGPEAQATLGAQAQWLLTNTDYTATIEGHADEQGTREY 119
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
NL + RA+ + +LI RGV+ +R +V + + PI+ + N+R +
Sbjct: 120 NLALGARRANAAREFLISRGVAGSRLKTVS-YGKERPIEICSDEACYSKNRRAVTVLT 176
>gi|99080027|ref|YP_612181.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99036307|gb|ABF62919.1| OmpA/MotB [Ruegeria sp. TM1040]
Length = 192
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 10/186 (5%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS----LDKAEDEFQMQLQD 60
+ + +SG A + + I G D AE +
Sbjct: 12 VLACVGFSIVLSGASPALAQDGNQIRAERYVPTIWVDPDGCEHWVMDDGAEGYMTTHMTP 71
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDS 119
G V R G + + + LQ + P T + HTDS
Sbjct: 72 DGKPVCRRGQLCGMMPTDQFFPTNGSTVNAAGRKRLQEWFQSV--MPGTRSFVVAGHTDS 129
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ + N+ +SQ RAD + R VR + + P N N+R+E
Sbjct: 130 RASDEYNMALSQRRADAVAQIGRS---VGARIKDVRAYGERSPRVPNRGAANLAQNRRVE 186
Query: 180 IQIFPR 185
I R
Sbjct: 187 IYCIRR 192
>gi|218666977|ref|YP_002427062.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218519190|gb|ACK79776.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 183
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + +L A K P+ ++ ++ + G+ K NL +SQER
Sbjct: 67 VTIRGVNFTTNSSKLMTADIAVLDSAARFALKHPTAILLVKGYCSKTGSYKYNLGLSQER 126
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
A + YL+ RGV + R I+ RG++++ P+ +N T+ GR NQR+ I
Sbjct: 127 AASVAHYLMGRGVPNYRIIT-RGYSWEDPVASNATREGRFLNQRVVI 172
>gi|198284396|ref|YP_002220717.1| OmpA/MotB domain-containing protein [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|198248917|gb|ACH84510.1| OmpA/MotB domain protein [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 184
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + +L A K P+ ++ ++ + G+ K NL +SQER
Sbjct: 68 VTIRGVNFTTNSSKLMTADIAVLDSAARFALKHPTAILLVKGYCSKTGSYKYNLGLSQER 127
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
A + YL+ RGV + R I+ RG++++ P+ +N T+ GR NQR+ I
Sbjct: 128 AASVAHYLMGRGVPNYRIIT-RGYSWEDPVASNATREGRFLNQRVVI 173
>gi|315453876|ref|YP_004074146.1| peptidoglycan-associated lipoprotein [Helicobacter felis ATCC
49179]
gi|315132928|emb|CBY83556.1| peptidoglycan-associated lipoprotein [Helicobacter felis ATCC
49179]
Length = 227
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/170 (12%), Positives = 49/170 (28%), Gaps = 8/170 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV- 78
+ + + T L+ + + +
Sbjct: 59 STPAKSQTPQTSPISQTKEGQPGTAHELETQNAQKNANATSETVPAPQEPQSEQEQFKSG 118
Query: 79 -----HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + A + + ++ +TD GT + N + +R
Sbjct: 119 EIVGQVYFDFDKYNVRPDMQDAVDQGAQKIQD-SKMKVLLEGNTDEFGTGEYNFALGNKR 177
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A +K L+ + + I F PI TK Q N+R++I++
Sbjct: 178 ALSVKEALVVK-GIAQDNIRTISFGESKPICLEKTKECYQKNRRVDIKVV 226
>gi|190895263|ref|YP_001985556.1| hypothetical protein RHECIAT_PC0000936 [Rhizobium etli CIAT 652]
gi|190700924|gb|ACE95006.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
Length = 246
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 59/166 (35%), Gaps = 3/166 (1%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
G AS + +T + G+ + T ++ D
Sbjct: 81 VGSTQASSNPEASANPAKQETVGASPTPGNGPAETAPTTAAATITTPQTYWKLPDDDQVN 140
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
V +F + K PMLQ + +++ + +I I HTD+ G + N +S RA
Sbjct: 141 YRVQFAF-DSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDASGGARYNQNLSMLRAR 199
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + + G ++P+D K N+R+E Q
Sbjct: 200 EVARFFTEDCHIPPERLEAVGVGEQFPLDPQKPKAD--ENRRVEFQ 243
>gi|144899936|emb|CAM76800.1| OmpA/MotB [Magnetospirillum gryphiswaldense MSR-1]
Length = 220
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 63/199 (31%), Gaps = 20/199 (10%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----- 59
+ L + ++ + ++I + ++ E
Sbjct: 24 VTLLLCFFILLASISKVDSV-IYEKVQSGMTSEIGKQPPQRPIENMRQELTQAAATVQGS 82
Query: 60 DTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSH 116
D + V + + + ++ +P+L+ +A LN+ F + + IQ H
Sbjct: 83 DDAVDVGTDDRGVVMNLDAGAMFTPGSADIKPTMVPLLKELAGTLNQPRFDNYRLEIQGH 142
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRG----VSSNRFISVRGFAYKYPIDTNDTKVG- 171
TDS K S ++ R + + V + P N + G
Sbjct: 143 TDSTPV-KTAQFPSNFDLASARALATMRAFVSLGVAESKMIVAAYGQFAPRVPNTLEDGT 201
Query: 172 -----RQNNQRIEIQIFPR 185
+ N+R+ I I+PR
Sbjct: 202 PLPANQALNRRVAIHIYPR 220
>gi|187927781|ref|YP_001898268.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12J]
gi|187724671|gb|ACD25836.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12J]
Length = 173
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 39/116 (33%), Gaps = 1/116 (0%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
++ ++ +L + L + IQ +TD GT +
Sbjct: 58 ELTDPNSPLAKRSIYFDFDSYSVKSEYQGLLGQHSRYLQSHNQRKVLIQGNTDERGTSEY 117
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL + Q+RA+ ++ + + + + P T + N+R +I
Sbjct: 118 NLALGQKRAEAVRR-ALSSMGVPDSQMEAVSLGKEKPQATGHDEDSWAQNRRADIV 172
>gi|254515071|ref|ZP_05127132.1| flagellar motor protein [gamma proteobacterium NOR5-3]
gi|219677314|gb|EED33679.1| flagellar motor protein [gamma proteobacterium NOR5-3]
Length = 216
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 56/145 (38%), Gaps = 13/145 (8%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN---KF 106
E L I + I + ++ L+++ +L +A L +
Sbjct: 65 LEQALAGPLSSGRITI--NDGRIGIS-GSVLFALNSDRLQEEGRELLVTLAAPLEVFLQE 121
Query: 107 PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
++ I TD + +N +S +RA + L+ G+ ++R + F +
Sbjct: 122 NDQLLMISGFTDDLPIQSGNLNFADNWELSAQRALTVTRELVAAGLPADRVFAAA-FGDQ 180
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPR 185
P+ N + GR N+R+E+ PR
Sbjct: 181 QPVAPNLDESGRALNRRVEMAPVPR 205
>gi|197337668|ref|YP_002157566.1| OmpA/MotB domain protein [Vibrio fischeri MJ11]
gi|197314920|gb|ACH64369.1| OmpA/MotB domain protein [Vibrio fischeri MJ11]
Length = 341
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L LQ + IL K+P + + + +TDSIG+ +N +SQ+RA+ +
Sbjct: 230 YFSFASSKVNTGSLE-LQKVLHILKKYPQSNLILTGNTDSIGSYASNQRLSQKRANSVAR 288
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ RG+S +R I+VR P+ +N T GR N R+++ I
Sbjct: 289 FFTDRGISISR-ITVRADGETNPVASNITAEGRSQNLRVDMNI 330
>gi|126663141|ref|ZP_01734139.1| peptidoglycan-associated lipoprotein, OmpA family [Flavobacteria
bacterium BAL38]
gi|126624799|gb|EAZ95489.1| peptidoglycan-associated lipoprotein, OmpA family [Flavobacteria
bacterium BAL38]
Length = 520
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 5/139 (3%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
L+ A + + + T D I ++ ++K+ L I +L
Sbjct: 384 LNIATGDTEKNIALTQKKAVVTDDTIVI--ENIYFDFNKSTVKKESELSLNKIVEVLTNN 441
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ I I +HTDS G+ N +S+ RA YL+++ ++ +G+ ++
Sbjct: 442 ANMSITINAHTDSKGSEAYNQKLSESRAKAAYQYLLKK-GIPASQLTYKGYGESELLEKC 500
Query: 167 D--TKVGRQNNQRIEIQIF 183
+ T Q N+RIE +I
Sbjct: 501 EKCTASQDQANRRIEFKII 519
>gi|153006246|ref|YP_001380571.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152029819|gb|ABS27587.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 274
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L LQ +A L P+ + Q + D GT + N+ + RA+
Sbjct: 173 FGFDQANLTADSQGTLQKLADCLKATPAKRVVAQGYADERGTAQYNVALGNRRAESA-RK 231
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ + +V F + + + T+ + N+R+E Q+
Sbjct: 232 YLEDLGVGGKTETVS-FGEENALCSEATESCWEQNRRVEFQV 272
>gi|89890645|ref|ZP_01202155.1| outer membrane protein [Flavobacteria bacterium BBFL7]
gi|89517560|gb|EAS20217.1| outer membrane protein [Flavobacteria bacterium BBFL7]
Length = 659
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 7/140 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ D + D + + + + LQ + + +P+
Sbjct: 518 QPLAVAKSIDDKVADIKVGDDLNDILDLNMIYFDFDKHNIRYDAEIELQKVLAFMEAYPN 577
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND- 167
++I I+SHTDS + N+ +S RA ++YLI + ++ RG+ ++
Sbjct: 578 SIIDIRSHTDSRASDGYNIKLSDRRAKSTRAYLIMK-GIKANRLTARGYGEYQLVNECSN 636
Query: 168 ----TKVGRQNNQRIEIQIF 183
T+ Q N+R E I
Sbjct: 637 GVECTEEQHQLNRRSEFIIM 656
>gi|72161146|ref|YP_288803.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Thermobifida fusca YX]
gi|71914878|gb|AAZ54780.1| similar to Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Thermobifida
fusca YX]
Length = 310
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 47/162 (29%), Gaps = 3/162 (1%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF---QMQLQDTGIVVSRIGDMITCYIP 77
E + ED + D
Sbjct: 104 TPEESANPATPPTTAEPQERTADADVSPPQEDAAPLPEDHRAQADENHEPQADPPRTITA 163
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V + L + + LQ A ++ + I + D GT + NL +S +R++
Sbjct: 164 VVHFSHNGTELTYEGIVELQRFAEEAAAADASWVRIDGYGDDTGTPEANLQVSLQRSEEA 223
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
++L + G PI N T GR N+RIE
Sbjct: 224 AAFLQEMMPVDGVAFITAGHGAANPIADNSTVEGRARNRRIE 265
>gi|223889267|ref|ZP_03623855.1| outer membrane protein [Borrelia burgdorferi 64b]
gi|223885300|gb|EEF56402.1| outer membrane protein [Borrelia burgdorferi 64b]
Length = 333
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I V + I + S L+K++ + LIA +L KF I I+ HT+
Sbjct: 211 KAIEVEKNNKGINLSFDIEFYPNSFQILQKEYKKI-DLIAKLLEKFKKNNILIEGHTEQF 269
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + +S++RA I +YLI+ V I +G+ + P + + + N+R+EI
Sbjct: 270 GLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEI 328
Query: 181 QIFPR 185
I
Sbjct: 329 TILNN 333
>gi|305667009|ref|YP_003863296.1| putative flagellar motor protein MotB [Maribacter sp. HTCC2170]
gi|88709244|gb|EAR01478.1| putative flagellar motor protein MotB [Maribacter sp. HTCC2170]
Length = 283
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 9/133 (6%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L D I +S ++ I + F + + +L +A ++N P ++ H
Sbjct: 136 LDDEDIEISVEKGVVFVSISDKLLFSSGSYNITSRAKEILGKVAKVVNNKPDFEFMVEGH 195
Query: 117 TDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD + K +N +S +RA + L + ++ G A P+ ++ +
Sbjct: 196 TDDVPYRKGVLLDNWDLSAKRATAVVRILQNDYGVDPKRMTAAGRAEFVPV----SQTQK 251
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 252 SKNRRTRIVVLPK 264
>gi|317153383|ref|YP_004121431.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943634|gb|ADU62685.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 254
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 6/136 (4%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
EDE + TG+ R G +I + L +L + T+L + +
Sbjct: 113 EDEDIKLKEGTGVAADRDG-VIFSADSAMLFAPGTADLAADADTVLDKVVTVLKDY-NLS 170
Query: 111 IAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ ++ HTD +N +S RA V Y+++ G+A P N
Sbjct: 171 LVVRGHTDDRPISTLKFPSNWELSSARAAVALDYILRESGIGISRAKAVGYADTRPAAPN 230
Query: 167 DTKVGRQNNQRIEIQI 182
D+ R NQR+E +
Sbjct: 231 DSDENRLKNQRVEFYL 246
>gi|124003926|ref|ZP_01688773.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123990505|gb|EAY29985.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 489
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-LKNNL 127
+ + +L L + +L K+P + IQ HT I NN
Sbjct: 371 EKHLELLAKSVYFEYKKNYLINPAKAYLNQVVNVLKKYPEIELEIQGHTCDISQSEANNQ 430
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S++RA + + + + + ++ GF K P ND R N+R++ ++
Sbjct: 431 QLSEDRAQKV-KAYLVKNGINAQRLTTTGFGSKQPAFPNDDYYNRVRNRRVQFKVV 485
>gi|225872180|ref|YP_002753635.1| OmpA family protein [Acidobacterium capsulatum ATCC 51196]
gi|225792320|gb|ACO32410.1| OmpA family protein [Acidobacterium capsulatum ATCC 51196]
Length = 245
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 58/162 (35%), Gaps = 1/162 (0%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
S + ++ + + GS+ + T + +
Sbjct: 83 TSGTQTVTPTQSTSYHLVATGQGGSTDATVQVTVTQPQAATVAESNIDEATFEANVKPVF 142
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++Q A L + P+ + I + D G+++ NL + + RA+ K
Sbjct: 143 YNFDSYSVRPDAQAIIQQDANYLIQHPNLHVVIGGYCDDRGSVEYNLALGENRANAAKQA 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ GVS +R +V + + T + Q+N+R + +
Sbjct: 203 LVSAGVSPDRLRTVS-YGKEKQFCTEQNESCWQSNRRAQFTL 243
>gi|68171722|ref|ZP_00545076.1| OmpA/MotB [Ehrlichia chaffeensis str. Sapulpa]
gi|67998855|gb|EAM85553.1| OmpA/MotB [Ehrlichia chaffeensis str. Sapulpa]
Length = 175
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I + +E +L+ + ++P T I I HTD+ GT + NL + ++RA
Sbjct: 40 TIEKIYFGFGKATIEDSDKTILEKVMQKAEEYPDTNIIIVGHTDTRGTDEYNLELGKQRA 99
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYP---IDTNDTKVG---RQNNQRIEIQIF 183
+ +K ++++R S I + P + +N+ + N+R+ I +
Sbjct: 100 NAVKDFILERNKSLEDRIIIESKGKSEPAVLVYSNNPEEAEYAHTKNRRVVITLT 154
>gi|296536082|ref|ZP_06898216.1| OmpA family protein [Roseomonas cervicalis ATCC 49957]
gi|296263579|gb|EFH10070.1| OmpA family protein [Roseomonas cervicalis ATCC 49957]
Length = 235
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 47/163 (28%), Gaps = 13/163 (7%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ + L V +GD + V L
Sbjct: 75 AALAARVEELQRYRSDFFGRLRDVL-GDRPEVRIVGDRFVFQ-GEVLFPVGGAELSAAGQ 132
Query: 94 PMLQLIATIL----NKFPS---TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG- 145
L+ +A +L +FP ++ + H D S ++ + +
Sbjct: 133 QQLRALAQVLLEVTRRFPQDLAWILRVDGHADRSPLRAGARYASNWELSAARAIAVGQFL 192
Query: 146 ---VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ F PID+ D+ N+RIE+++ R
Sbjct: 193 IGEGLPPNRVAATAFGEYQPIDSGDSPEAFARNRRIELRLTDR 235
>gi|87198413|ref|YP_495670.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
gi|87134094|gb|ABD24836.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
Length = 174
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ L A+ L ++P+ + I+ H D GT NL + + RA+
Sbjct: 68 DRVFFDFDSYGLDDTDRATLTRQASWLAQYPNVNVTIEGHADERGTRDYNLALGERRANA 127
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IEIQI 182
K++L GV++ R SV + + P + N+R + + I
Sbjct: 128 AKNFLASLGVATTRM-SVVSYGKERPEALGSDEQSWAQNRRAVTMVI 173
>gi|119775600|ref|YP_928340.1| OmpA family protein [Shewanella amazonensis SB2B]
gi|119768100|gb|ABM00671.1| OmpA family protein [Shewanella amazonensis SB2B]
Length = 187
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ + +Q HTD IGT N +S ERAD + + L I+ F P+
Sbjct: 107 ETDHVSLLLQGHTDDIGTEAANYRLSAERADNVAASLAMDFAIPKARITTASFGESMPVA 166
Query: 165 TNDTKVGRQNNQRIEIQIF 183
N+T++GRQ N+R++I I
Sbjct: 167 PNNTEIGRQQNRRVDILIL 185
>gi|225621015|ref|YP_002722273.1| putative peptidoglycan-associated outer membrane lipoprotein
[Brachyspira hyodysenteriae WA1]
gi|225215835|gb|ACN84569.1| putative peptidoglycan-associated outer membrane lipoprotein
[Brachyspira hyodysenteriae WA1]
Length = 243
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/236 (13%), Positives = 76/236 (32%), Gaps = 54/236 (22%)
Query: 1 MIKELGLSMFIMTTISGCGLASR------------------------------------- 23
MIK++ +F++ + C +
Sbjct: 1 MIKKILTLIFVLILAASCSTNDKHVVVLAFSKQLHAVLYNDNSQSTKTASKTYIQKDDIT 60
Query: 24 ------EKKKVFLHKSNDTDIVNKRFGSSL---DKAEDEFQMQLQDTGIVVSRIGDMITC 74
++KK + + + L D E+E ++ T + + + + I
Sbjct: 61 TVADPIKEKKEYTNTQAQVSKKAEEKKEELTNNDALEEEKPQVIKQTEV-IQKDDNEILL 119
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ L+ ++ + I LN + I+ H+DSIG N+ +S+ RA
Sbjct: 120 TANIISFDFDSYELKNEYNEGIDEICKYLNNNRDINLIIEGHSDSIGDSNYNIYLSENRA 179
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
I L+ + + G+ + + ND +++ + I + ++
Sbjct: 180 KAIFDKLVDK-GIDKDRLRYIGYGSTHSSEYND------KDRKCQFVIINNSDEEQ 228
>gi|203287626|ref|YP_002222641.1| outer membrane protein [Borrelia recurrentis A1]
gi|201084846|gb|ACH94420.1| outer membrane protein [Borrelia recurrentis A1]
Length = 385
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Query: 48 DKAEDEFQMQLQDTGI---VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ E+E + ++ I + + + I + + + + +K L+ IA +L
Sbjct: 247 NTIENEIKEYIKREQIDSIEIEKNKNGIKLSLDIE-FYPDSFQIIRKEHNKLKHIANLLE 305
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
KF I I+ HT GT + +S++RA I +YL++ V + I +G+ K P
Sbjct: 306 KFQDNNILIEGHTAKFGTEQEMQELSEKRAHTIGNYLLKMKVKNKNQIFFKGWGAKKPKY 365
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
+ + + N+R+EI I
Sbjct: 366 VSSSPLA-SKNRRVEITILNN 385
>gi|154173933|ref|YP_001408144.1| OmpA/MotB [Campylobacter curvus 525.92]
gi|153793024|gb|EAU00162.2| OmpA/MotB [Campylobacter curvus 525.92]
Length = 249
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 60/189 (31%), Gaps = 15/189 (7%)
Query: 11 IMTTISGCGLASREKKKVFL-----HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG--- 62
++ + G + + K+ ++ S L + L +G
Sbjct: 43 ALSVLEGGARPDNQDDQESELEKQIKKTKGQSTSSQGEFSELSATIKKINELLSASGAPE 102
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFL-EKKFLPMLQLIATILNK-FPSTVIAIQSHTDS 119
I + D +P + F + + L+ IA ++ K P I I HTD
Sbjct: 103 ISIDESEDGFIIRLPSALLFERGKAQIENDDARLFLKRIAMVIAKLTPDVNIDIVGHTDD 162
Query: 120 IGTLKNNLLISQERADVIKSYLIQR----GVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
N++ + ++ + R + G A P +N T GR N
Sbjct: 163 QRPDMNSIFKDNWQLSTARAISVVEEMVANGVDARRLIASGRASYDPFASNQTPEGRAKN 222
Query: 176 QRIEIQIFP 184
R+EI
Sbjct: 223 NRVEIHFVS 231
>gi|229592593|ref|YP_002874712.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
gi|229364459|emb|CAY52284.1| putative putative lipoprotein [Pseudomonas fluorescens SBW25]
Length = 163
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 55/148 (37%), Gaps = 4/148 (2%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPML 96
+ + L+ G ++ G + V F S+V L + ++
Sbjct: 18 ALGGCQTAPPKGLTPAQVAVLKQQGFELTDEGW--AFGLSGKVLFGSDVEALNQPSTDIV 75
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
Q I L + I HTD+ G N +S RA + + ++ I +RG
Sbjct: 76 QRIGKALLGVGIERVRIDGHTDASGKETYNQQLSLRRAKSV-ATVLMSVGMKEENIQLRG 134
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ +NDT GR N+R+ I +
Sbjct: 135 LGSSEPVASNDTAAGRTENRRVSIVVMS 162
>gi|171058626|ref|YP_001790975.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6]
gi|170776071|gb|ACB34210.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6]
Length = 196
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 59/170 (34%), Gaps = 7/170 (4%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C ++R + + + S + Q ++ + +G +
Sbjct: 26 CSTSTRLEPAAPVEDRSVGAGSGSTGASGSSSSNGSSTGQTSESRVATLDLGKGTDIGMG 85
Query: 78 V------HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
++ + P+++ A L + I+ HTD G + NL + Q
Sbjct: 86 NAGLPRVVYFDFDSYVVKDTYRPVIEANAKYLGVDRKRQMLIEGHTDERGGREYNLALGQ 145
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA+ + L GV ++ +V + + P + + N+R E++
Sbjct: 146 RRAEAVVRALALLGVPDSQTEAVS-YGEERPAASGADEAAWAKNRRAELK 194
>gi|85714417|ref|ZP_01045405.1| flagellar motor protein [Nitrobacter sp. Nb-311A]
gi|85698864|gb|EAQ36733.1| flagellar motor protein [Nitrobacter sp. Nb-311A]
Length = 342
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 13/140 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---T 109
+ + +GD ++ L + L IA L + PS
Sbjct: 205 AILGNRPDIRIVGDRFVFQ-SEVFFETAQAILLPEGKSELDKIANALTDLDKQIPSEIAW 263
Query: 110 VIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
V+ + HTD + K+N +S RA + YL+ RGV R ++ GF P+D
Sbjct: 264 VLRVDGHTDVRPINSPVFKSNWDLSAARAISVVQYLVSRGVPPQRLVAA-GFGEFQPLDP 322
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
T + N+RIE+++ R
Sbjct: 323 GTTDDAYKRNRRIELKLTER 342
>gi|327193535|gb|EGE60427.1| hypothetical conserved membrane protein [Rhizobium etli CNPAF512]
Length = 246
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 60/166 (36%), Gaps = 3/166 (1%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
G AS + +T V+ G+ + T ++ D
Sbjct: 81 VGSTQASSNPEASANPAKQETVGVSPTPGNRPAETAPTTAAATITTPQTYWKLPDDDQVN 140
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
V +F + K PMLQ + +++ + +I I HTD+ G + N +S RA
Sbjct: 141 YRVQFAF-DSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDASGGARYNQNLSMLRAR 199
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + + G ++P+D K N+R+E Q
Sbjct: 200 EVARFFTEDCHIPPERLEAVGVGEQFPLDPQKPKAD--ENRRVEFQ 243
>gi|254700373|ref|ZP_05162201.1| hypothetical protein Bsuib55_05884 [Brucella suis bv. 5 str. 513]
gi|261750869|ref|ZP_05994578.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261740622|gb|EEY28548.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513]
Length = 343
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---T 109
++ + +GD + + K ++ +A + + P
Sbjct: 205 EILSDKENIRIVGDRFVFQ-SEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIPDDINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI GV +NR ++ GF P+D
Sbjct: 264 VLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGEYQPLD 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
T +T R N+RIE+++ R
Sbjct: 323 TANTADTRARNRRIELKLTER 343
>gi|195941898|ref|ZP_03087280.1| outer membrane protein (tpn50) [Borrelia burgdorferi 80a]
Length = 380
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I V + I + S L+K++ + LIA +L KF I I+ HT+
Sbjct: 258 KAIKVEKNNKGINLSFDIEFYPNSFQILQKEYKKI-DLIAKLLEKFKKNNILIEGHTEQF 316
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + +S++RA I +YLI+ V I +G+ + P + + + N+R+EI
Sbjct: 317 GLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEI 375
Query: 181 QIFPR 185
I
Sbjct: 376 TILNN 380
>gi|119947169|ref|YP_944849.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37]
gi|119865773|gb|ABM05250.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37]
Length = 295
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
++ L K L ++ +NK S I I H+D G NL +S+
Sbjct: 176 INQLSFNYIENQYKLNKTQTKDLVKLSDYINKDQSVVKILIDGHSDKYGNSSQNLRLSKF 235
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RAD I LI V+ + I +RG +YPI +ND+ GR+ N+R+ I++ + N K
Sbjct: 236 RADEIAQTLINNSVNMD-LIEIRGHGGRYPIASNDSAEGREKNRRVSIRLV-KANAK 290
>gi|91785602|ref|YP_560808.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
LB400]
gi|91689556|gb|ABE32756.1| outer membrane porin, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 584
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF----PSTVIAIQSHTDSIGTLKNNLL 128
+ V + + + L A +LN + + + ++D++G NL
Sbjct: 470 VLNLQVINFASASARVPASAVEDLNQSAHVLNACAGNGKTARLEVAGYSDNVGGEAANLQ 529
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S++RA+ + + R + +G+ P+ +NDT GR N+RIE
Sbjct: 530 LSKQRAEAV-RAYLVRTGVPADSLIAQGYGDARPVASNDTASGRFANRRIEFV 581
>gi|107027050|ref|YP_624561.1| hypothetical protein Bcen_4708 [Burkholderia cenocepacia AU 1054]
gi|116691753|ref|YP_837286.1| hypothetical protein Bcen2424_3655 [Burkholderia cenocepacia
HI2424]
gi|170736247|ref|YP_001777507.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|254248991|ref|ZP_04942311.1| Flagellar motor protein [Burkholderia cenocepacia PC184]
gi|105896424|gb|ABF79588.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116649753|gb|ABK10393.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
gi|124875492|gb|EAY65482.1| Flagellar motor protein [Burkholderia cenocepacia PC184]
gi|169818435|gb|ACA93017.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 214
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 11/149 (7%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF- 106
+ + L I +V F + L+ +L+ +A L +
Sbjct: 59 QQRKSLEQALAGPLAAGRVTLVNGRIGISGNVLFALNSDQLQPAGRDLLKTLAGPLATYL 118
Query: 107 --PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
++ I D +N +S +RA + +I GV ++ + F
Sbjct: 119 KTRDEILMISGFADDQQVHAGNRLFADNWELSAKRALTVTRAMIDAGVPASSVFAAA-FG 177
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ P+ +N GR N+R+EI PR +
Sbjct: 178 SEQPVSSNADDEGRAKNRRVEIAPVPRKS 206
>gi|301062462|ref|ZP_07203113.1| putative peptidoglycan-associated lipoprotein [delta
proteobacterium NaphS2]
gi|300443436|gb|EFK07550.1| putative peptidoglycan-associated lipoprotein [delta
proteobacterium NaphS2]
Length = 103
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L+ + +L+ A L S + I + D GT + NL + + RA K +
Sbjct: 1 FDFDRSNLKPEAQEILRDKADFLRANRSYSVLIAGNCDDRGTEEYNLALGERRAMSAKKF 60
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ G+S +R ++ + P D + V N+R ++
Sbjct: 61 LVALGISPDRIKTIS-YGELRPADPANNPVAWALNRRDTFKL 101
>gi|148361303|ref|YP_001252510.1| hypothetical protein LPC_3277 [Legionella pneumophila str. Corby]
gi|148283076|gb|ABQ57164.1| hypothetical protein LPC_3277 [Legionella pneumophila str. Corby]
Length = 294
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Query: 77 PVHVSFVSEVFLEKKFLPM-LQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERA 134
F + L + L+ IA ++ I I H D G N ISQ RA
Sbjct: 185 ESVFHFGVDSKLLSDADKVQLRRIAQYVDADVQIDAIKIIGHADDSGRKGYNNAISQYRA 244
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ +K+YLI R R +S+ PI NDT GR N+R+ + + +
Sbjct: 245 ESVKNYLI-RLGVPQRKLSITWVGALQPIARNDTDEGRAANRRVVVTLIKK 294
>gi|52843156|ref|YP_096955.1| hypothetical protein lpg2962 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52630267|gb|AAU29008.1| sodium-type flagellar protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 299
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Query: 77 PVHVSFVSEVFLEKKFLPM-LQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERA 134
F + L + L+ IA ++ I I H D G N ISQ RA
Sbjct: 190 ESVFHFGVDSKLLSDADKVQLRRIAQYVDADVQIDAIKIIGHADDSGRKGYNNAISQYRA 249
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ +K+YLI R R +S+ PI NDT GR N+R+ + + +
Sbjct: 250 ESVKNYLI-RLGVPQRKLSITWVGALQPIARNDTDEGRAANRRVVVTLIKK 299
>gi|256823064|ref|YP_003147027.1| peptidoglycan-associated lipoprotein [Kangiella koreensis DSM
16069]
gi|256796603|gb|ACV27259.1| peptidoglycan-associated lipoprotein [Kangiella koreensis DSM
16069]
Length = 172
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 57/164 (34%), Gaps = 13/164 (7%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C E+++V D + + +A + R
Sbjct: 20 CSTTKPEEEQVDTTAQEDAAAQAEAEALARQRAAE-----------EAERQRIAALLDNN 68
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V + + +++ +L+ A + + ++ H D GT + NL + + RA +
Sbjct: 69 VIYFDFDDDSIRSEYVEVLEAHAMYIQS-SGKSVVLEGHADERGTPEYNLALGERRAKSV 127
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ S+ I V F + P + + Q N+R+EI+
Sbjct: 128 AQLMRT-YGVSDSNIEVISFGEESPANPAHNESAWQENRRVEIK 170
>gi|88658586|ref|YP_507279.1| OmpA family protein [Ehrlichia chaffeensis str. Arkansas]
gi|88600043|gb|ABD45512.1| OmpA family protein [Ehrlichia chaffeensis str. Arkansas]
Length = 175
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I + +E +L+ + ++P T I I HTD+ GT + NL + ++RA
Sbjct: 40 TIEKIYFGFGKATIEDSDKTILEKVMQKAEEYPDTNIIIVGHTDTRGTDEYNLELGKQRA 99
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYP---IDTNDTKVG---RQNNQRIEIQIF 183
+ +K ++++R S I + P + +N+ + N+R+ I +
Sbjct: 100 NAVKDFILERNKSLEDRIIIESKGKSEPAVLVYSNNPEEAEYAHTKNRRVVITLT 154
>gi|66047120|ref|YP_236961.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|63257827|gb|AAY38923.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
Length = 300
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L + L P+ I + H+D+ G N +S+
Sbjct: 171 IKQAEVGFPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + Y + + I++R +YP+ N + R N+R+ + +
Sbjct: 231 RALAVMDYFKAQ-GVPEQQITLRFHGERYPLAPNTNEANRARNRRVNVHL 279
>gi|261211953|ref|ZP_05926239.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC341]
gi|260838561|gb|EEX65212.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC341]
Length = 294
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
V L K L IA + ++ + ++TDS T N+ +S++RA+ +
Sbjct: 191 DSVELNKASQKRLAQIAEYIRYNSDIDLVLVSTYTDSTDTNNNSQNLSEKRAE-VLREYF 249
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 250 KSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|50956547|gb|AAT90794.1| conserved hypothetical protein [uncultured proteobacterium QS1]
Length = 511
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 56/146 (38%), Gaps = 10/146 (6%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVFLEKKFLP--MLQLIAT 101
+ ++ L + + V + + + L ++F ++ +
Sbjct: 343 NIMETLPQPLPKILSEGWLEVRADPRGWLLIFTSDGAFATGQARLSEEFKKKRNIERLGE 402
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNN----LLISQERADVIKSYLI--QRGVSSNRFISVR 155
L +P + + HTD+ + L +S+ RA + + + R ++
Sbjct: 403 ALAPWPG-DLEVIGHTDNKPYRNSPSNSNLKLSEGRAQTVADKMRESMQSSKYQRSVTSV 461
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G P+DTNDT+ GR N+R++I
Sbjct: 462 GKGDTEPLDTNDTEQGRSRNRRVDIL 487
>gi|170720302|ref|YP_001747990.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169758305|gb|ACA71621.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 324
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ L+ L +I L P+ I + H+D+ G N S+
Sbjct: 172 VRQTQVGFPGGGIDLDAAARARLDVILDYLQADPTVNHIELNGHSDNSGNRLTNRDTSRR 231
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
RA + ++ I+VR +YP+ N++ R N+R+ I++ I+K
Sbjct: 232 RALAVAD-YLKAHGVPEEQITVRFHGERYPLAKNNSAANRARNRRVNIELDRVAPIEK 288
>gi|225620337|ref|YP_002721594.1| putative flagellar motor protein [Brachyspira hyodysenteriae WA1]
gi|225215156|gb|ACN83890.1| putative flagellar motor protein [Brachyspira hyodysenteriae WA1]
Length = 266
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 63/171 (36%), Gaps = 16/171 (9%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ + G S+DKA + +++ + + + F S
Sbjct: 87 GATVDNLPSTDRGYSVGRSIDKATSVLESEIKSRKVRIEEDERGFIISLGADQYFESAST 146
Query: 88 LEKKFLPMLQ---LIATILNKFPSTVIAIQSHTDS----IGTLKNNLLISQERADVIKSY 140
++ +A++L+ P+ + I+ HTDS G++ + ++
Sbjct: 147 NLVDNQNNVETFIKLASVLSGLPN-DVRIEGHTDSGSIIPGSITEQKFGNNWGLSSARAM 205
Query: 141 LIQRGVSSN--------RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+I + N S+ G+A P+ +ND GR N+R++I +
Sbjct: 206 VILEKIFENDQAGKLDRNKYSIAGYADTRPVASNDLPDGRALNRRVDIVVV 256
>gi|53716748|ref|YP_105773.1| hypothetical protein BMAA1115 [Burkholderia mallei ATCC 23344]
gi|53722286|ref|YP_111271.1| hypothetical protein BPSS1264 [Burkholderia pseudomallei K96243]
gi|67640638|ref|ZP_00439437.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|76817712|ref|YP_335426.1| hypothetical protein BURPS1710b_A0267 [Burkholderia pseudomallei
1710b]
gi|121597371|ref|YP_989733.1| hypothetical protein BMASAVP1_0116 [Burkholderia mallei SAVP1]
gi|124383227|ref|YP_001024134.1| hypothetical protein BMA10229_0310 [Burkholderia mallei NCTC 10229]
gi|126444000|ref|YP_001062783.1| hypothetical protein BURPS668_A1788 [Burkholderia pseudomallei 668]
gi|126447861|ref|YP_001078471.1| hypothetical protein BMA10247_A1285 [Burkholderia mallei NCTC
10247]
gi|126458362|ref|YP_001075736.1| hypothetical protein BURPS1106A_A1702 [Burkholderia pseudomallei
1106a]
gi|134283770|ref|ZP_01770468.1| ompA family protein [Burkholderia pseudomallei 305]
gi|167004053|ref|ZP_02269827.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|167723789|ref|ZP_02407025.1| hypothetical protein BpseD_32535 [Burkholderia pseudomallei DM98]
gi|167742753|ref|ZP_02415527.1| hypothetical protein Bpse14_32062 [Burkholderia pseudomallei 14]
gi|167819935|ref|ZP_02451615.1| hypothetical protein Bpse9_32712 [Burkholderia pseudomallei 91]
gi|167828320|ref|ZP_02459791.1| hypothetical protein Bpseu9_31854 [Burkholderia pseudomallei 9]
gi|167849768|ref|ZP_02475276.1| hypothetical protein BpseB_31255 [Burkholderia pseudomallei B7210]
gi|167898369|ref|ZP_02485770.1| hypothetical protein Bpse7_31831 [Burkholderia pseudomallei 7894]
gi|167906730|ref|ZP_02493935.1| hypothetical protein BpseN_31160 [Burkholderia pseudomallei NCTC
13177]
gi|167915084|ref|ZP_02502175.1| hypothetical protein Bpse112_31676 [Burkholderia pseudomallei 112]
gi|167922922|ref|ZP_02510013.1| hypothetical protein BpseBC_30487 [Burkholderia pseudomallei
BCC215]
gi|217418998|ref|ZP_03450505.1| OmpA family protein [Burkholderia pseudomallei 576]
gi|226198078|ref|ZP_03793650.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|237510063|ref|ZP_04522778.1| OmpA/MotB domain protein [Burkholderia pseudomallei MSHR346]
gi|242311463|ref|ZP_04810480.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|254174540|ref|ZP_04881202.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|254183624|ref|ZP_04890216.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|254191105|ref|ZP_04897610.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254193505|ref|ZP_04899939.1| ompA family protein [Burkholderia pseudomallei S13]
gi|254200586|ref|ZP_04906951.1| OmpA family protein [Burkholderia mallei FMH]
gi|254262357|ref|ZP_04953222.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|254301765|ref|ZP_04969208.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|254356764|ref|ZP_04973039.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|52212700|emb|CAH38731.1| OmpA family membrane protein [Burkholderia pseudomallei K96243]
gi|52422718|gb|AAU46288.1| ompA family protein [Burkholderia mallei ATCC 23344]
gi|76582185|gb|ABA51659.1| ompA family protein [Burkholderia pseudomallei 1710b]
gi|121225169|gb|ABM48700.1| ompA family protein [Burkholderia mallei SAVP1]
gi|124291247|gb|ABN00517.1| ompA family protein [Burkholderia mallei NCTC 10229]
gi|126223491|gb|ABN86996.1| OmpA family protein [Burkholderia pseudomallei 668]
gi|126232130|gb|ABN95543.1| OmpA family protein [Burkholderia pseudomallei 1106a]
gi|126240715|gb|ABO03827.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|134244952|gb|EBA45048.1| ompA family protein [Burkholderia pseudomallei 305]
gi|147748198|gb|EDK55273.1| OmpA family protein [Burkholderia mallei FMH]
gi|148025791|gb|EDK83914.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|157811639|gb|EDO88809.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|157938778|gb|EDO94448.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|160695586|gb|EDP85556.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|169650258|gb|EDS82951.1| ompA family protein [Burkholderia pseudomallei S13]
gi|184214157|gb|EDU11200.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|217398302|gb|EEC38317.1| OmpA family protein [Burkholderia pseudomallei 576]
gi|225929954|gb|EEH25969.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|235002268|gb|EEP51692.1| OmpA/MotB domain protein [Burkholderia pseudomallei MSHR346]
gi|238521399|gb|EEP84851.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|242134702|gb|EES21105.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|243060517|gb|EES42703.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|254213359|gb|EET02744.1| ompA family protein [Burkholderia pseudomallei 1710a]
Length = 215
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 13/152 (8%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
E L + + I+ + ++ L+ +L+ +A
Sbjct: 58 ESQRRKTLEQALAAPLAAGRVTLVNGRIGIS---GSVLFALNSDELQPAGRDLLKSLAGP 114
Query: 103 LNKF---PSTVIAIQSHTDS------IGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L + ++ + D +N +S +RA + I GV ++ +
Sbjct: 115 LAAYLNANHEILMVSGFADDLQVRAGNRRFADNWELSAKRALTVTRAFIDEGVPASSVFA 174
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
F + P+ N GR N+R+EI PR
Sbjct: 175 AA-FGSEQPVSPNSNDAGRAKNRRVEIAPVPR 205
>gi|225849664|ref|YP_002729898.1| OmpA/MotB [Persephonella marina EX-H1]
gi|225646381|gb|ACO04567.1| OmpA/MotB [Persephonella marina EX-H1]
Length = 286
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 65/157 (41%), Gaps = 1/157 (0%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+ ++ ++ ++ E +++ + I G +
Sbjct: 127 QEIEQGTDPFVPEGEKVAKLEERKTPEKKVEKEREIIEEQFEGYYPLKLHARIHFEFDKY 186
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
++K++LP L +I+ L P+ + I +TDSIG+ N ++ +RA +K YLI++
Sbjct: 187 QIKKEYLPYLNVISKYLKSKPNLKVKIVGYTDSIGSKSYNDRLAYKRALAVKEYLIKQ-G 245
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
I + G + + N T + R N+R + +
Sbjct: 246 IPAERIEIVGRGKENYLVDNKTWLNRFTNRRADFFVM 282
>gi|84516651|ref|ZP_01004010.1| peptidoglycan-associated lipoprotein [Loktanella vestfoldensis
SKA53]
gi|84509687|gb|EAQ06145.1| peptidoglycan-associated lipoprotein [Loktanella vestfoldensis
SKA53]
Length = 176
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + + + + +L A L I+ H D GT + NL + RA+
Sbjct: 65 DRVLFAIDQSTISPEGRTILDGQAQWLLTNADYRAVIEGHADEQGTREYNLALGFRRANA 124
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++ YL+ RGV S R + V + + PI+ + N+R + +
Sbjct: 125 VREYLVSRGVPSAR-LEVTSYGKERPIEVCSNEACYSQNRRA-VTVLS 170
>gi|308050234|ref|YP_003913800.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307632424|gb|ADN76726.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 204
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 2/130 (1%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVI 111
+++ V+++ + + L L ++Q + L F
Sbjct: 67 VRVKTPQGDTTVAQLPALASTIDLSIEFDSGSARLRPSSLALVQTLGDALTDPRFNGQAF 126
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I HTD+ G + NL +S RA+ ++ YL+Q + + V GF P+ +N + G
Sbjct: 127 LIAGHTDADGDEEYNLGLSLRRANTVRDYLLQHTSLTPDQLKVVGFGETTPLASNHERQG 186
Query: 172 RQNNQRIEIQ 181
+Q N+R+E+Q
Sbjct: 187 KQQNRRVEVQ 196
>gi|84501675|ref|ZP_00999847.1| OmpA family protein [Oceanicola batsensis HTCC2597]
gi|84390296|gb|EAQ02855.1| OmpA family protein [Oceanicola batsensis HTCC2597]
Length = 222
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 12/176 (6%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K + +T ++ C S + ND N ++L
Sbjct: 9 KLILAGAIGVTMVAACTQESSDTFHGEAGGFNDIGFGNATMNNTL---------VHSGER 59
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
V + + + V+F + L+ +L A + +FP + + HTD +G
Sbjct: 60 GYVLDLANRFAAEVDSSVNFAFNSAALDATARQILARQAHWIRQFPEVRLRVYGHTDLVG 119
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N + RA + +L+ +G+S +R +V P+ + R N+R
Sbjct: 120 SSSYNYRLGLRRAQAVVHFLVAQGISRSRLEAVVSKGETQPLVVTQGRERR--NRR 173
>gi|330973095|gb|EGH73161.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 300
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L + L P+ I + H+D+ G N +S+
Sbjct: 171 IKQAEVGFPGGGIELDARARARLDNMVAYLKADPTVNRIELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + Y + + I++R +YP+ N + R N+R+ + +
Sbjct: 231 RALAVMDYFKAQ-GVPEQQITLRFHGERYPLAPNTNEANRARNRRVNVHL 279
>gi|187929080|ref|YP_001899567.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12J]
gi|187725970|gb|ACD27135.1| OmpA/MotB domain protein [Ralstonia pickettii 12J]
Length = 167
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 56/155 (36%), Gaps = 7/155 (4%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH-VSFVSEVFLEKK 91
+ + K+ S ++ + + +S D I L
Sbjct: 2 EALSAQLAKQRESLSERIARALAPEAGAAPVGISTKDDRIYISFNSDEGFASGRADLMLM 61
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVS 147
L +AT+L + + HTD ++ + S RA + +L +R
Sbjct: 62 LARQLDRLATVLADTRG-KVTVLGHTDDAPGPRDRMESNLALSTARATAVARHLQER-GI 119
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ +S+ G K P+ N T GR N+R+EI +
Sbjct: 120 ASDRLSIIGRGVKDPVGDNRTAAGRALNRRVEIIL 154
>gi|325913887|ref|ZP_08176246.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
gi|325539962|gb|EGD11599.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
Length = 221
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 13/149 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + + I + + L+ + +L+ +A
Sbjct: 56 QAEAQRRKTLEQALAAPLAAGRVTL--VDGRIGIR-GNVLFAFNSDELQPEGREVLKSLA 112
Query: 101 TILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L ++ ++ + TD +N +S +RA + LI GV +
Sbjct: 113 APLAQYLSAREEILMVSGFTDDRPVLGGNRRYADNWELSAQRALTVTRALIADGVPAASV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ F + P+D+N + R N+R+EI
Sbjct: 173 FAAA-FGSQQPVDSNADEARRAKNRRVEI 200
>gi|310816653|ref|YP_003964617.1| flagellar motor protein [Ketogulonicigenium vulgare Y25]
gi|308755388|gb|ADO43317.1| flagellar motor protein [Ketogulonicigenium vulgare Y25]
Length = 510
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 51/148 (34%), Gaps = 14/148 (9%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF-------LPML 96
+ + L V +GD + L +L
Sbjct: 344 EQYRSEFFGSLRALLDGQD-GVQIVGDRFVFS-SEVLFEAGSATLSAAGDAEIANVAALL 401
Query: 97 QLIATILNKFPSTVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA+ + VI + HTD+ G NN +SQ RA + Y+IQ
Sbjct: 402 RRIASEIPSQIDWVIRVDGHTDNTPLSGTGEFANNWELSQARALSVVLYMIQNEGIPPNR 461
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
++ GF P++ +T R N+RI+
Sbjct: 462 LAANGFGEYQPLNPANTPEARAQNRRID 489
>gi|294508627|ref|YP_003572686.1| chemotaxis motB protein [Salinibacter ruber M8]
gi|294344956|emb|CBH25734.1| Chemotaxis motB protein [Salinibacter ruber M8]
Length = 263
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 7/166 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ + + S + ++ ++ + + I + I I +
Sbjct: 73 SGSKSVVPADYSSGSSQSRARKRAEQYEQFLKRLEERGLGEKIQADLKKEGIHVVIADSL 132
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERAD 135
F L K +L+ +A +L++ + + HTD +N +S RA
Sbjct: 133 MFRTGRARLLKPSRTVLRELANLLSRDVG-SVVVSGHTDDRPIGTRKFPSNWELSTARAA 191
Query: 136 VIKSYLIQR-GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+L +R + G A P +N T GR N+R+EI
Sbjct: 192 SAVRFLQERAPEYDSSRFQAVGHASTDPRASNQTDEGRAKNRRVEI 237
>gi|33594231|ref|NP_881875.1| putative peptidoglycan-associated lipoprotein [Bordetella pertussis
Tohama I]
gi|33598303|ref|NP_885946.1| putative peptidoglycan-associated lipoprotein [Bordetella
parapertussis 12822]
gi|33603213|ref|NP_890773.1| putative peptidoglycan-associated lipoprotein [Bordetella
bronchiseptica RB50]
gi|33564306|emb|CAE43607.1| putative peptidoglycan-associated lipoprotein [Bordetella pertussis
Tohama I]
gi|33566861|emb|CAE39076.1| putative peptidoglycan-associated lipoprotein [Bordetella
parapertussis]
gi|33568844|emb|CAE34602.1| putative peptidoglycan-associated lipoprotein [Bordetella
bronchiseptica RB50]
gi|332383645|gb|AEE68492.1| putative peptidoglycan-associated lipoprotein [Bordetella pertussis
CS]
Length = 165
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 1/114 (0%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
I + +++ +++ A L I I+ +TD G + NL
Sbjct: 50 NPQSILAQQRSVYFDFDSYTVSEQYRGLVETHARYLASNNQQRIKIEGNTDERGGAEYNL 109
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ Q RAD ++ + S+ I F + P T ++ N+R +I
Sbjct: 110 ALGQRRADAVRRMMTLL-GVSDNQIETISFGKEKPKATGSSEADFAENRRADIV 162
>gi|54309669|ref|YP_130689.1| outer membrane protein [Photobacterium profundum SS9]
gi|46914107|emb|CAG20887.1| conserved hypothetical outer membrane protein [Photobacterium
profundum SS9]
Length = 220
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ +T +VS G I L + +L+ IA L +++ H
Sbjct: 97 EYLNTADLVSTTGAQDEKLIARVYFAFDSQRLTPESQTVLKAIARKL-TNSQQTVSLAGH 155
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS+G+ N + +RA YLI V S + + PI++N T GR N+
Sbjct: 156 TDSVGSQGYNYTLGLQRAKSSMQYLIDNEVKDTNLKS-KTYGETQPIESNTTSQGRAMNR 214
Query: 177 RIEIQ 181
R+++
Sbjct: 215 RVDVV 219
>gi|119385179|ref|YP_916235.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119374946|gb|ABL70539.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
Length = 463
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 6/120 (5%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV--IAIQSHTDSIGTLKNNLLI 129
+ V ++ L + P+++ I + + +A+ HTD++ ++N
Sbjct: 343 VVRASDPEVFRSAKASLNPAYQPLVEAIGRTVVANAHRIGAVAVSGHTDNVPVQRSNPFA 402
Query: 130 SQERADVIKSYLIQRG----VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
S + ++ + + IS G A P+ N T+ GR N+RIEI+I R
Sbjct: 403 SNQGLSEARAETVAQALAAAGVPAELISAEGRADSQPVGDNATRDGRAQNRRIEIRIEKR 462
>gi|157962526|ref|YP_001502560.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157847526|gb|ABV88025.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 324
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVH-VSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
D L ++++ ++ + I + V L L + +
Sbjct: 191 DPMHKPLDKQQVLITPTINVQSVSIRGNSVFGFDSSKLTDTS--ALDEVIKSALASKNAS 248
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I++ ++TDS+G + NL +++ RA+ ++Y I GV+ +R I + + P+ +N T
Sbjct: 249 ISVTAYTDSLGAERYNLALAKRRAEATQAYFITHGVAPSR-IHIDWKGEENPVSSNMTAK 307
Query: 171 GRQNNQRIEIQI 182
GR N+R+EI+I
Sbjct: 308 GRALNRRVEIEI 319
>gi|83717671|ref|YP_439345.1| hypothetical protein BTH_II1148 [Burkholderia thailandensis E264]
gi|167577759|ref|ZP_02370633.1| hypothetical protein BthaT_06461 [Burkholderia thailandensis TXDOH]
gi|167615886|ref|ZP_02384521.1| hypothetical protein BthaB_06301 [Burkholderia thailandensis Bt4]
gi|257142466|ref|ZP_05590728.1| hypothetical protein BthaA_25103 [Burkholderia thailandensis E264]
gi|83651496|gb|ABC35560.1| ompA family protein [Burkholderia thailandensis E264]
Length = 215
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 13/152 (8%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
E L + + I+ + ++ L+ +L+ +A
Sbjct: 58 ESQRRKTLEQALAGPLAAGRVTLVNGRIGIS---GSVLFALNSDELQPAGRDLLKSLAGP 114
Query: 103 LNKF---PSTVIAIQSHTDS------IGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L + ++ + D +N +S +RA + I GV ++ +
Sbjct: 115 LAAYLDANHEILMVSGFADDLQVRAGNRRFADNWELSAKRALTVTRAFIDEGVPASSVFA 174
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
F + P+ N GR N+R+EI PR
Sbjct: 175 AA-FGSEQPVSPNSDDAGRAKNRRVEIAPVPR 205
>gi|217034805|ref|ZP_03440196.1| hypothetical protein HP9810_866g2 [Helicobacter pylori 98-10]
gi|216942664|gb|EEC22235.1| hypothetical protein HP9810_866g2 [Helicobacter pylori 98-10]
Length = 157
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 55/158 (34%), Gaps = 3/158 (1%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K + V S+ E + + + + +V R I +
Sbjct: 2 DKETVAGDVSAKAVQSAPVSTETVQEKQ-EPKQEPAPVVEERPAVESGTIIASIYFDFDK 60
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
+++ L I + + ++ +TD G+ + N + +R +K+ L+ +
Sbjct: 61 YEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVIK- 118
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
I F P T T+ + N+R+++++
Sbjct: 119 GVEKDMIKTISFGETKPKCTQKTRECYKENRRVDVKLV 156
>gi|242280306|ref|YP_002992435.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242123200|gb|ACS80896.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 250
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 7/129 (5%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-- 116
+ + IT +P V F +V L +K ++ + P I I+ +
Sbjct: 116 EGIMSAKFEDGKITLKLPSDVLFNPGQVQLSEKGRNAVKALKNFFISHPDQYINIKGYTD 175
Query: 117 ---TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
S LK+N IS RA + + + ++ G P+ N++K RQ
Sbjct: 176 DTQPSSKSRLKDNWEISSLRAVNVLR-YLMKLGIKPNRLTATGLGEMDPLVPNNSKRNRQ 234
Query: 174 NNQRIEIQI 182
N+R+E +
Sbjct: 235 RNRRVEFVL 243
>gi|83814332|ref|YP_446691.1| chemotaxis protein [Salinibacter ruber DSM 13855]
gi|83755726|gb|ABC43839.1| probable chemotaxis protein [Salinibacter ruber DSM 13855]
Length = 241
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 7/166 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ + + S + ++ ++ + + I + I I +
Sbjct: 51 SGSKSVVPADYSSGSSQSRARKRAEQYEQFLKRLEERGLGEKIQADLKKEGIHVVIADSL 110
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERAD 135
F L K +L+ +A +L++ + + HTD +N +S RA
Sbjct: 111 MFRTGRARLLKPSRTVLRELANLLSRDVG-SVVVSGHTDDRPIGTRKFPSNWELSTARAA 169
Query: 136 VIKSYLIQR-GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+L +R + G A P +N T GR N+R+EI
Sbjct: 170 SAVRFLQERAPEYDSSRFQAVGHASTDPRASNQTDEGRAKNRRVEI 215
>gi|330947752|gb|EGH48208.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 102
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+L + L P V+ I+ +TDS G ++NL +S++RA + ++
Sbjct: 1 PPSRTIL-KVVQFLQINPRRVVRIEGYTDSTGDRQDNLKLSKDRAQAVAD-VLMDLGVDE 58
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ I V G+ ++P++ N ++ GR N+R+EI
Sbjct: 59 KRIHVEGYGQEFPVNANTSERGRAQNRRVEIV 90
>gi|308094644|ref|ZP_05890943.2| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308095659|ref|ZP_05907392.2| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308126475|ref|ZP_05910381.2| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|308087973|gb|EFO37668.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308091063|gb|EFO40758.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308107721|gb|EFO45261.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
Length = 284
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 12/149 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + L T D + + + + + K++
Sbjct: 106 LNQLEQQLDYVLTQTTCTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPKYMGH 165
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L A IL P+ + + H D GT ++N ++QERA+ +K + ++ + +
Sbjct: 166 LAEAAYILRDHPALSLVVTGHADVTGTPEHNKKLAQERAEQVKR-YLSVFGVTSDRVQTK 224
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ T R N+R+ I++
Sbjct: 225 SVGDTLPLYEGQTPAVRLTNRRVSIEVLS 253
>gi|254500358|ref|ZP_05112509.1| OmpA family protein [Labrenzia alexandrii DFL-11]
gi|222436429|gb|EEE43108.1| OmpA family protein [Labrenzia alexandrii DFL-11]
Length = 344
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------ST 109
++ +S +GD + + + L +A + + +
Sbjct: 206 EILSQRSDISVVGDRFVFQ-SEVLFDSGSEDINPEGQQELDKLAEAILELSGQIPDEINW 264
Query: 110 VIAIQSHTD-----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD G L+NN +S RA + YLI++GV R ++ GF P++
Sbjct: 265 VLRVDGHTDARPLSGTGRLRNNWELSAARAISVVRYLIEKGVDPKRLVAA-GFGEFQPLE 323
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
++T N+RIE+++ R
Sbjct: 324 ESETPDALAKNRRIELKLTER 344
>gi|28898249|ref|NP_797854.1| hypothetical protein VP1475 [Vibrio parahaemolyticus RIMD 2210633]
gi|308125351|ref|ZP_05774746.2| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|28806466|dbj|BAC59738.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308113621|gb|EFO51161.1| outer membrane protein [Vibrio parahaemolyticus K5030]
Length = 300
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 12/149 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + L T D + + + + + K++
Sbjct: 122 LNQLEQQLDYVLTQTTCTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPKYMGH 181
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L A IL P+ + + H D GT ++N ++QERA+ +K + ++ + +
Sbjct: 182 LAEAAYILRDHPALSLVVTGHADVTGTPEHNKKLAQERAEQVKR-YLSVFGVTSDRVQTK 240
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ T R N+R+ I++
Sbjct: 241 SVGDTLPLYEGQTPAVRLTNRRVSIEVLS 269
>gi|94314001|ref|YP_587210.1| hypothetical protein Rmet_5082 [Cupriavidus metallidurans CH34]
gi|93357853|gb|ABF11941.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 217
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 13/147 (8%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF- 106
E+ L + + D + ++ L+ + +L+ +A L+ +
Sbjct: 63 QTLEEALAGPLAAGRVTLK---DGRIGISGNVLFALNSDQLQPEGRALLKSLAAPLSAYL 119
Query: 107 --PSTVIAIQSHTDSIGTLKNNLLI------SQERADVIKSYLIQRGVSSNRFISVRGFA 158
++ + TD + N S +RA + LI+ G+ S F
Sbjct: 120 GARDEILMVSGFTDDQQVREGNRRFADNLELSAQRALTVTRALIEAGLPPASIFSAA-FG 178
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ P+ +N T+ R N+R+EI PR
Sbjct: 179 SQQPVASNATEESRAKNRRVEIAPVPR 205
>gi|315637079|ref|ZP_07892302.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315478615|gb|EFU69325.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 854
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 4/127 (3%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G V G T + + + ++++ + A L I+ H
Sbjct: 730 AGYTVDENGCTNTINL-EVLFENNSAVIKEETKGKVLSFARYLVDNKEFNTIIEGHASKD 788
Query: 121 GTL--KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
T +N +S++RA IK+ LI GV ++R S+ G + PI N T G+ N+RI
Sbjct: 789 PTASAAHNQKLSEQRASAIKNLLISNGVEASRIQSI-GKGHNEPIADNSTAEGQALNRRI 847
Query: 179 EIQIFPR 185
+ + +
Sbjct: 848 DAILIRK 854
>gi|296114560|ref|ZP_06833213.1| hypothetical protein GXY_02241 [Gluconacetobacter hansenii ATCC
23769]
gi|295978916|gb|EFG85641.1| hypothetical protein GXY_02241 [Gluconacetobacter hansenii ATCC
23769]
Length = 321
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 13/159 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
++ + + L+DT + +GD + V L + + +
Sbjct: 166 AQKVEQLQRYRSEFFGRLRDVLKDTK-GIQVVGDRFVFQ-SEVLFPVGSADLSPEGIQEI 223
Query: 97 QLIATILNKFPS-------TVIAIQSHTDSIGTLK---NNLLISQERADVIKSYLIQRGV 146
+++ L + ++ + H D + +N +S RA + LI
Sbjct: 224 KVLGRTLKQVAQQIPPSVPWILRVDGHADRLPIHTAFPSNWELSSARAITVVKMLIA-DG 282
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
S R ++ GFA P+D T N+RIE ++ R
Sbjct: 283 ISPRHLAATGFADFQPLDNGTTAEAFARNRRIEFRLTDR 321
>gi|126741160|ref|ZP_01756841.1| OmpA/MotB domain protein [Roseobacter sp. SK209-2-6]
gi|126717797|gb|EBA14518.1| OmpA/MotB domain protein [Roseobacter sp. SK209-2-6]
Length = 140
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 50/143 (34%), Gaps = 6/143 (4%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ D+ E + V R I I L P L
Sbjct: 1 ATSANTTAADEQETTTIAAAAEEYTPVERQ-SQINVQIS---FDFDSATLRSDQKPKLAN 56
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ T + TV I HTDS G+ K N +S RA ++ +LI + + G
Sbjct: 57 MCTSMKAMTGTVFQIIGHTDSSGSAKYNERLSLLRAQEVRRHLISSCGVAENSLRAIGMG 116
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQ 181
P + ND + N+R+E Q
Sbjct: 117 ETAPFNQNDPRAD--ENRRVEFQ 137
>gi|8928233|sp|Q9S3P9|MOTY_VIBAN RecName: Full=Sodium-type flagellar protein motY; AltName:
Full=Polar flagellum motor protein; Flags: Precursor
gi|5802659|gb|AAD51752.1|AF176946_1 polar flagellum motor protein [Listonella anguillarum]
Length = 293
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ V L K L IA + ++ + ++TDS+ + + +S+
Sbjct: 180 ISFTILHYDRDNVQLNKASQKRLAQIADYIRYNQDIDLVLVSTYTDSVDSRGVSQDLSER 239
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ + + I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 240 RAE-VLRDYFKSLGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 288
>gi|330829325|ref|YP_004392277.1| OmpA family protein [Aeromonas veronii B565]
gi|328804461|gb|AEB49660.1| OmpA family protein [Aeromonas veronii B565]
Length = 162
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 4/143 (2%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLI 99
S+ E L++ G ++ G T + V F + V L + ++ +
Sbjct: 20 AGCQSAPKGLTPEQIAVLKEQGFYLTDEGW--TLDLANRVLFANNVGALNPQTRQSVEKL 77
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
L + HTD+ G N +S +RA + L+ + + G
Sbjct: 78 GKTLLGVGLDKARVDGHTDNTGESSYNQQLSLKRAQSVADVLVS-VGMKPANLEIHGRGE 136
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
P+ N T+ GR N+R+ I I
Sbjct: 137 TMPLADNKTREGRAANRRVAIVI 159
>gi|298487201|ref|ZP_07005250.1| Phosphate-binding protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298158225|gb|EFH99296.1| Phosphate-binding protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 408
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 63/165 (38%), Gaps = 8/165 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
++ ++ L + + ++ + + Q+ ++R + ++
Sbjct: 249 TSAHQRWAQALVRFAQSAEGQAIVAQTVQALKVQPTAQMPADYQALARKAERLSVNFR-- 306
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVI 137
L+ K L+ +A L + + + D+ L+S+ RA +
Sbjct: 307 -FAQGSAKLDNKAQQDLKRVAEYLKTSNQLNQHVTLVGFGDAKSDPARAALLSRLRAMAV 365
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L++ GV+ + G + P+ TND GR N+R+E+ +
Sbjct: 366 RRELLKSGVTFRD---IVGLGDEMPVATNDIDDGRIKNRRVEVWV 407
>gi|224532865|ref|ZP_03673480.1| outer membrane protein [Borrelia burgdorferi WI91-23]
gi|224512254|gb|EEF82640.1| outer membrane protein [Borrelia burgdorferi WI91-23]
Length = 381
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I V + I + S L+K++ + LIA +L KF I I+ HT+
Sbjct: 259 KAIEVEKNNKGINLSFDIEFYPNSFQILQKEYKKI-DLIAKLLEKFKKNNILIEGHTEQF 317
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + +S++RA I +YLI+ V I +G+ + P + + + N+R+EI
Sbjct: 318 GLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFKGWGSQKPKHPKSSPL-KAKNRRVEI 376
Query: 181 QIFPR 185
I
Sbjct: 377 TILNN 381
>gi|260775707|ref|ZP_05884603.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608123|gb|EEX34292.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
BAA-450]
Length = 294
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 65/153 (42%), Gaps = 6/153 (3%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+ N+ + + F+ ++ + + V +G + I F FL+ F
Sbjct: 121 EEAESNEANKALAAIIQAAFKREVDEGMVDVEDLGQELVIRIREKGMFPQGSAFLQPAFR 180
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSN 149
P+++ +A ++ P I I HT S+ +++ +S RA + + + +
Sbjct: 181 PLIRQLADLIKDVPG-QIRIAGHTSSMTFDSELYRSSWDLSALRAASVVLEMEKVPGFDS 239
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++++G++ P+ + +++R+EI +
Sbjct: 240 HRVAIQGWSEHKPLSSEQYPNSVGSSRRVEISL 272
>gi|37704618|gb|AAR01581.1| OprF [Pseudomonas sp. MFY65]
Length = 317
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 52/150 (34%), Gaps = 10/150 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + +D N ++DK D + V G +
Sbjct: 174 GSGGKVAPAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEVVR 227
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ ++ +A + ++P T ++ HTDS+G N +S+ RA
Sbjct: 228 VELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSERRA 287
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ +K L Q+ + + G+ P+
Sbjct: 288 NAVKDVLTQQYGVESTRVDSVGYGETRPVA 317
>gi|317402473|gb|EFV83041.1| peptidoglycan-associated lipoprotein [Achromobacter xylosoxidans
C54]
Length = 166
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 1/114 (0%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
I + ++ +++ A L I I+ +TD G + NL
Sbjct: 51 NPQSILAQQRSVYFDFDSYTVSDQYRGLVETHARYLASHQQQKIKIEGNTDERGGAEYNL 110
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ Q RAD ++ + S+ I F + P T ++ N+R +I
Sbjct: 111 ALGQRRADAVRRMMTLL-GVSDNQIETISFGKEKPKATGSSEADFAENRRADIV 163
>gi|226069484|dbj|BAH36952.1| OmpA-like outer membrane protein [Pasteurella pneumotropica]
Length = 347
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I + + + +A+ +TD IG NL +SQ RAD
Sbjct: 230 SDVTFAFGKANLKPQAQATLDGIYGEIAQVSNAKVAVAGYTDRIGKDAANLKLSQRRADS 289
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +YL+ + + + I+ G+ P+ T D GR ++R+EI +
Sbjct: 290 VANYLVAK-GVAAQDITATGYGEANPVTGATCDAVKGRKALIACLAPDRRVEIAV 343
>gi|315223632|ref|ZP_07865486.1| outer membrane protein A [Capnocytophaga ochracea F0287]
gi|314946413|gb|EFS98408.1| outer membrane protein A [Capnocytophaga ochracea F0287]
Length = 340
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 67 RIGDMI--TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
GD + I + L I L P+ IAI+ HTDS G
Sbjct: 216 NEGDDLAPVFAIDNIHFNYGRTNIRYDASVQLAKIVAFLEANPTVKIAIKVHTDSRGEDG 275
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIE 179
N+ +++ +A I +L+ + S ++ +G+ ++ + ++ Q N+R+E
Sbjct: 276 YNMNLTETQAQSIYQWLVSK-GISPNRLTAKGYGETQLVNGCENGVPCSEEEHQANKRVE 334
Query: 180 IQIFPR 185
I +
Sbjct: 335 FIIIEK 340
>gi|149913687|ref|ZP_01902220.1| hypothetical protein RAZWK3B_10301 [Roseobacter sp. AzwK-3b]
gi|149812807|gb|EDM72636.1| hypothetical protein RAZWK3B_10301 [Roseobacter sp. AzwK-3b]
Length = 599
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 51/159 (32%), Gaps = 14/159 (8%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
N + + L + GD + E L +
Sbjct: 443 QNADLERYRSEFFGRLRDVL-GAQEGIRIEGDRFVFS-SEVLFAPGEAELSGAGQREVAK 500
Query: 99 IATILNKFPS-------TVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGV 146
+A I V+ + HTD + ++N +S RA + Y+I
Sbjct: 501 VAEIFRSVTDEIPEGIDWVLQVDGHTDDVPVRPGAAFEDNWELSMARALSVVRYMIDTLG 560
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S GF P++ +DT R N+RIE++ +
Sbjct: 561 LPPERLSANGFGQYQPVNPDDTPEARAQNRRIELKFTGK 599
>gi|119896920|ref|YP_932133.1| hypothetical protein azo0629 [Azoarcus sp. BH72]
gi|119669333|emb|CAL93246.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 198
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 60/189 (31%), Gaps = 14/189 (7%)
Query: 7 LSMFIMTTISGCG-------------LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
+++ + T +SGC + + + + + A
Sbjct: 10 IALLLATLLSGCAPRSYLVLLENTDGSTGKVIVEGSDGRRQVVERAGDGVSLAASPAPVA 69
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ + + + + L + L + + P+ I+I
Sbjct: 70 TTQETLSSDFGPAMAALPPPPTSFLLYFETAAARLTPESRNQLPRVLAQVRSRPAPDISI 129
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
HTD++G+ +N + RA + L++ + R I+V + +
Sbjct: 130 IGHTDTVGSNADNEALGLVRARTVLK-LLEAAGVTAREITVTSHGERNLLVPTADNTDEA 188
Query: 174 NNQRIEIQI 182
N+R+E+ +
Sbjct: 189 RNRRVEVTV 197
>gi|298208824|ref|YP_003717003.1| putative flagellar motor protein MotB [Croceibacter atlanticus
HTCC2559]
gi|83848751|gb|EAP86620.1| putative flagellar motor protein MotB [Croceibacter atlanticus
HTCC2559]
Length = 280
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 6/133 (4%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
D I V+ ++ + + F + K +L+ +A ++N P+ + I+ HT
Sbjct: 136 NDEDIDVNIDETVVMISVSDKLLFNSGSYRVSNKANSLLERLAAVINSEPAIEVMIEGHT 195
Query: 118 D-----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
D +K+N +S ERA I L + + G + P+ ND+ R
Sbjct: 196 DDRTVKQGSYIKDNWDLSTERATAIIRKLADDYNVAPEKMIAAGRSSYKPLVANDSNENR 255
Query: 173 QNNQRIEIQIFPR 185
N+R I I P
Sbjct: 256 AANRRTRILILPN 268
>gi|332665133|ref|YP_004447921.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332333947|gb|AEE51048.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 143
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G +I +++++ + L + + S I+I HTD+IG
Sbjct: 19 GQETIISDGKAPYHIFSIYFGGGSHYIDQEQIDALYKWLDGIPEVDSHDISIHGHTDNIG 78
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N +SQ R+D L+ + IS+R F P+ N T GR+ N+R++I
Sbjct: 79 GAEYNQWLSQMRSDNTLQKLVDK-GLRTEMISIRDFGQFNPLFDNSTWEGRRKNRRVDII 137
Query: 182 IFP 184
++P
Sbjct: 138 VWP 140
>gi|157165686|ref|YP_001466588.1| OmpA family protein [Campylobacter concisus 13826]
Length = 219
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 68/187 (36%), Gaps = 14/187 (7%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDI--VNKRFGSSLDKAEDEFQMQLQDTG---IVV 65
++ + G + +K +S T K + + + L +G I +
Sbjct: 16 ALSVLEGGARPDSQVEKETDPESRRTPKPKAQKGAQNEVTSTVKKINELLTASGAPEITM 75
Query: 66 SRIGDMITCYIPVHVSFV-SEVFLE-KKFLPMLQLIATILNKFPS-TVIAIQSHTDS--- 119
D +P + F + + L+ I I+ K P+ I +TD+
Sbjct: 76 EESEDGFIVRLPAAMLFDKDSAEISGEDAKLFLKRIGMIIAKMPNEVKTDIIGYTDNTNP 135
Query: 120 --IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
KNN +S RA + L+ GV R I+ G A PI +N T GR N R
Sbjct: 136 SKDSIYKNNWQLSTARALSVLEELVSDGVPQERLIT-SGRASFDPIASNSTDEGRAKNNR 194
Query: 178 IEIQIFP 184
+EI
Sbjct: 195 VEIHFVS 201
>gi|109947175|ref|YP_664403.1| peptidoglycan-associated lipoprotein precursor [Helicobacter
acinonychis str. Sheeba]
gi|109714396|emb|CAJ99404.1| peptidoglycan-associated lipoprotein precursor [Helicobacter
acinonychis str. Sheeba]
Length = 181
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 51/169 (30%), Gaps = 4/169 (2%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+ GC + + N + ++ + L I
Sbjct: 16 VVGCSHKIDNNTVAGDVSTGVKAVQNAPVNTEPVVEKEAPKEDLAPAVEKKPAIESGTII 75
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L I + + ++ +TD G+ + N + +R
Sbjct: 76 A--SIYFDFDKYEIKDSDQETLDEIVQKAKEN-HMQVLLEGNTDEFGSSEYNQALGVKRT 132
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+K+ L+ + I F P TK + N+R+++++
Sbjct: 133 LSVKNALVIK-GVEKDMIKTISFGEIKPKCIQKTKECYKENRRVDVKLV 180
>gi|217969212|ref|YP_002354446.1| peptidoglycan-associated lipoprotein [Thauera sp. MZ1T]
gi|217506539|gb|ACK53550.1| peptidoglycan-associated lipoprotein [Thauera sp. MZ1T]
Length = 170
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 57/160 (35%), Gaps = 15/160 (9%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C E + + + +GI + I
Sbjct: 17 CSSTGPENGAASVQDRGTGVATVTAGSA-------------KGSGIAALTDPNNI-LSKR 62
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++++ P+++ A L + P + +Q +TD G+ + NL + Q+RADV+
Sbjct: 63 SVFFDFDSFVIKQEARPLIEAHARFLVQNPQMNMLVQGNTDERGSREYNLALGQKRADVV 122
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
K L+ G ++ SV + P + T+ N+R
Sbjct: 123 KQALMLLGAKESQIESVS-LGEEKPRCEDRTENCYAENRR 161
>gi|312891928|ref|ZP_07751431.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311295559|gb|EFQ72725.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 571
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ V R I + + F+ L ++ +L + P+ I + S DS +
Sbjct: 443 VNVPRPEPKPDFVIRTIYYDLDKSFIRPDAAAELDKLSVVLKEHPALKIELSSFADSRAS 502
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQR 177
NL +S+ RA +YL+ +GVS +R + G+ + ++ ++ Q N+R
Sbjct: 503 YSYNLALSRRRATAAVNYLVNKGVSISRVL-ANGYGKTHLVNQCADHVKCSEAEHQLNRR 561
Query: 178 IEIQIF 183
E ++
Sbjct: 562 TEFKLI 567
>gi|75676898|ref|YP_319319.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
gi|74421768|gb|ABA05967.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
Length = 167
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 1/111 (0%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
D + + L + + L+ A L + I+ H D GT + N
Sbjct: 49 SQQDFVVNVGDRVFFESDQTSLSPQAITTLEKQAHWLQTYHRYSFTIEGHADERGTREYN 108
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ + RA ++S+L RG+ +R ++ + + P+ + N+R
Sbjct: 109 IALGARRAQSVRSFLASRGIDPSRMRTIS-YGKERPVAVCNDISCWSQNRR 158
>gi|71281747|ref|YP_267714.1| ompA family protein [Colwellia psychrerythraea 34H]
gi|71147487|gb|AAZ27960.1| ompA family protein [Colwellia psychrerythraea 34H]
Length = 562
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ ++ L+ K L + + S+ I + +DS+G N +S +
Sbjct: 456 RLSLNFRFAYATK-ELDNKGKRDLLRLVDFMEDHQSSRIVLMGFSDSVGAQVKNTHLSYQ 514
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA ++ L RG+ ++V PI N+T+ GR+ N+R+E+ +
Sbjct: 515 RAKSVELALTSRGIP---VLAVEAMGEALPIANNNTEDGRKRNRRVEVWLL 562
>gi|186477828|ref|YP_001859298.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184194287|gb|ACC72252.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 242
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 38/105 (36%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V L L + I +TDS G+ + N +S RA +
Sbjct: 136 DATFAVGSATLTPFATAKLDDFVAANQGVDVDRLTIAGYTDSTGSAELNNRLSAARARSV 195
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ V+G+ P+ N T +GR N+R+EIQ+
Sbjct: 196 -QGYLATAGLRASAWDVQGYGSASPVAPNKTAIGRAKNRRVEIQV 239
>gi|296410008|gb|ADH15780.1| OmpP6 [Haemophilus influenzae]
Length = 136
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 57/165 (34%), Gaps = 31/165 (18%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
++ C ++ + + G S+ +
Sbjct: 1 AALAACSSSNND--------AAGNGAAQTFGGYSVADLQQ-------------------- 32
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + +++ +L A LN P+ + ++ +TD GT + N+ + Q
Sbjct: 33 --RYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQR 90
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
RAD +K YL +GV + + +V + + P + N+R
Sbjct: 91 RADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 134
>gi|157737365|ref|YP_001490048.1| hypothetical protein Abu_1119 [Arcobacter butzleri RM4018]
gi|157699219|gb|ABV67379.1| hypothetical outer membrane protein [Arcobacter butzleri RM4018]
Length = 854
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 4/127 (3%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G V G T + + + ++++ + A L I+ H
Sbjct: 730 AGYTVDENGCTNTINL-EVLFENNSAVIKEETKGKVLSFARYLLDNKEFNTIIEGHASKD 788
Query: 121 GTL--KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
T +N +S++RA IK+ LI GV ++R S+ G + PI N T G+ N+RI
Sbjct: 789 PTASAAHNQKLSEQRAAAIKNLLISNGVEASRIQSI-GKGHNEPIADNSTAEGQALNRRI 847
Query: 179 EIQIFPR 185
+ + +
Sbjct: 848 DAILIRK 854
>gi|256820532|ref|YP_003141811.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256582115|gb|ACU93250.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 340
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 67 RIGDMI--TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
GD + I + L I L P+ IAI+ HTDS G
Sbjct: 216 NEGDDLAPVFAIDNIHFNYGRTNIRYDASVQLAKIVAFLEANPTVKIAIKVHTDSRGEDG 275
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIE 179
N+ +++ +A I +L+ + S ++ +G+ ++ + ++ Q N+R+E
Sbjct: 276 YNMNLTETQAQSIYQWLVSK-GISPNRLTAKGYGETQLVNGCENGVPCSEEEHQANKRVE 334
Query: 180 IQIFPR 185
I +
Sbjct: 335 FIIIEK 340
>gi|187250865|ref|YP_001875347.1| outer membrane protein [Elusimicrobium minutum Pei191]
gi|186971025|gb|ACC98010.1| Outer membrane protein [Elusimicrobium minutum Pei191]
Length = 993
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 1/145 (0%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
+N ++ + + ++R D I + L +K +++
Sbjct: 850 INAPEQPYINLPDTIVAQAQEGFSEPLARKLDAIQFNSRDMEYQFNSCELTEKQKNIIRE 909
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
L FP T I + +TD+IG+ N IS RA+ LI+ + I + G A
Sbjct: 910 KCAALKDFPYTKIIVTGNTDNIGSYGVNKSISLRRANAAAKILIEE-GLNPDTIEIMGVA 968
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIF 183
Y P+ N T+ GR N+R +I I
Sbjct: 969 YDNPVTGNLTREGRAMNRRTDILIL 993
>gi|104779940|ref|YP_606438.1| outer membrane lipoprotein [Pseudomonas entomophila L48]
gi|95108927|emb|CAK13623.1| putative outer membrane lipoprotein (OmpA domain) [Pseudomonas
entomophila L48]
Length = 166
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 43/118 (36%), Gaps = 2/118 (1%)
Query: 68 IGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ + V F S+ L +++ I L + I H D+ G N
Sbjct: 49 TDEGWAFDLSGKVLFGSDLDSLNSASESIVERIGKALLSVDIQRVRIDGHADASGKAAYN 108
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ RA + LI + I RG P+ N T GR N+R+ I +
Sbjct: 109 QQLSERRAQSVAKALIG-IGMQPQNIQTRGLGSSQPVADNRTSTGRMENRRVSIVVAS 165
>gi|328473741|gb|EGF44576.1| hypothetical protein VP10329_13800 [Vibrio parahaemolyticus 10329]
Length = 300
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 12/149 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + L T D + + + + + K++
Sbjct: 122 LNQLEQQLDYVLTQTTCTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPKYMGH 181
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L A IL P+ + + H D GT ++N ++QERA+ +K + ++ + +
Sbjct: 182 LAEAAYILRDHPALSLVVTGHADVTGTPEHNKKLAQERAEQVKR-YLSVFGVASDRVQTK 240
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ T R N+R+ I++
Sbjct: 241 SVGDTLPLYEGQTPAVRLTNRRVSIEVLS 269
>gi|85706710|ref|ZP_01037802.1| peptidoglycan-associated lipoprotein [Roseovarius sp. 217]
gi|85668768|gb|EAQ23637.1| peptidoglycan-associated lipoprotein [Roseovarius sp. 217]
Length = 170
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 54/172 (31%), Gaps = 19/172 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L + ++ C + ++ + GS+ D + Q +
Sbjct: 7 TLILCAGLALAAC--TNPDRFDNGNSVDLNNGAGAGLAGSAQDPTSAAYFQQAVGDRV-- 62
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ V + L L A L I+ H D GT +
Sbjct: 63 --------------LFEVDQPTLNATAQSTLDGQANWLMTNRDFTAVIEGHADEQGTREY 108
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NL + RA+ ++ YLI + + + V F + PI+ + N+R
Sbjct: 109 NLALGARRANAVQEYLITQ-GVAPNRLRVVSFGKERPIEICSNEACYTKNRR 159
>gi|261251019|ref|ZP_05943593.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
gi|260937892|gb|EEX93880.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
Length = 305
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 63/179 (35%), Gaps = 25/179 (13%)
Query: 2 IKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K +++ + +S C + K+ +DK D +
Sbjct: 1 MKNRYNASMTLAVALVVSACSTDTYVSKEN------------------IDKFGDPLVEKF 42
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+V I + L+++ + + + + K IAI HTD
Sbjct: 43 LIRECIVPERDIRIAM---ASHFDFDKSELKEQDKQSIDRLISSIRKLHG-QIAIVGHTD 98
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ N+ +S RA+ +K+Y+ + +S V+ + P+ +K N+R
Sbjct: 99 YQGSDDYNVKLSLRRAEAVKAYMQTQLDASRYDWEVKYYGESKPLVEGQSKQANAENRR 157
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 46/154 (29%), Gaps = 2/154 (1%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
+ + E Q+ E L+
Sbjct: 145 EGQSKQANAENRRAYVVFEQTQTQQENEFCAPPEPQRKVFVAMTSHFGFDEAKLKPIDKT 204
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L A LN + I HTD G++ N ++++RA+ + YL + + V
Sbjct: 205 SLDEFANQLNGLNG-RVLIAGHTDYQGSISYNERLAEQRAESVLQYLQTKLDPNQFVWEV 263
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ F P+ N+R +F G++
Sbjct: 264 KSFGELNPVTQEQDLDANALNRRA-FIVFKEGDL 296
>gi|323493119|ref|ZP_08098250.1| putative sodium-type flagellar protein MotY precursor [Vibrio
brasiliensis LMG 20546]
gi|323312590|gb|EGA65723.1| putative sodium-type flagellar protein MotY precursor [Vibrio
brasiliensis LMG 20546]
Length = 304
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L + L L + + L PS I + HTDS G +NL +S+ RA+++
Sbjct: 180 FNIGQKSLSSEQLTTLAALNSYLQADPSVSKILVDGHTDSSGARASNLALSRVRAELVSK 239
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ S I VR +YPI TN T G+ N+R+ +++
Sbjct: 240 Q-LHHLGVSQSMIEVRAHGSRYPIATNTTTAGKAKNRRVTLRLV 282
>gi|312884426|ref|ZP_07744130.1| putative outer membrane protein [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367738|gb|EFP95286.1| putative outer membrane protein [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 198
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 71/194 (36%), Gaps = 10/194 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M L L + + ++ C + + + A D Q Q
Sbjct: 1 MNYRLSL-IIAVFFLAACSSNEQADYTSKSLSQYKDMALADDDKDGVINARDLCQQTEQG 59
Query: 61 TGIVVSRIGDMITCYIPVHV---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
T I G ++ + +L ++ +A L+K+P T + +Q
Sbjct: 60 TSIDNDGCGKYTREKGSHNLHILFENDSSEVSPIYLSQIRSMADFLDKYPDTSVELQGFA 119
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ +G+ +NL +S++RA +K L++ GV R IS+ GF +++
Sbjct: 120 NHLGSHSHNLELSKQRASNVKKVLVRYGVDFER-ISIVGFGD----AKTSHSQNSAQDRK 174
Query: 178 IEIQIF-PRGNIKK 190
+ + + ++ K
Sbjct: 175 VIATVIGSKESLDK 188
>gi|116619652|ref|YP_821808.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222814|gb|ABJ81523.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 263
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIAIQSHTDSIGTLK 124
D I + + + L A ILN FP I I+ H D G+ +
Sbjct: 145 NDRIASDVQDAFFDYDKTDIRSDARDALTRNATALKAILNDFPGAAIVIEGHCDERGSAE 204
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
NL + RA K +L+ G+ ++R ++ + + P T + Q N+R+
Sbjct: 205 YNLGLGDRRASSAKEFLVGLGIPADRLKTIS-YGKERPQCTEQNETCWQKNRRVHF 259
>gi|300716120|ref|YP_003740923.1| outer membrane protein A [Erwinia billingiae Eb661]
gi|299061956|emb|CAX59072.1| Outer membrane protein A [Erwinia billingiae Eb661]
Length = 357
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + +TD IG+ + N +S++RA
Sbjct: 230 SDVLFTFNKASLKPEGQQALDQLYTQLSSLDPKDGSVVVLGYTDRIGSDQYNQKLSEKRA 289
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR-------QNNQRIEIQI 182
+ YL+ + + IS RG P+ N D+ GR ++R+EI++
Sbjct: 290 QSVVDYLVSK-GIPSNKISARGMGESNPVTGNTCDSVKGRNALIDCLAPDRRVEIEV 345
>gi|16799769|ref|NP_470037.1| hypothetical protein lin0694 [Listeria innocua Clip11262]
gi|16413146|emb|CAC95926.1| motB [Listeria innocua Clip11262]
gi|313620085|gb|EFR91593.1| chemotaxis protein MotB [Listeria innocua FSL S4-378]
Length = 275
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 57/171 (33%), Gaps = 7/171 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A+ ++K + ++ + + + + I + + I +
Sbjct: 95 ANEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKITTKYSDEGLLITIRDDI 154
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE------R 133
F L + + I + + T+ I S + ++ S
Sbjct: 155 LFQSGSAELSADKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARA 214
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +++ + + + S RG+ P+ ND R+ N+R+EI + P
Sbjct: 215 VNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIATNREKNRRVEIMVRP 265
>gi|254254994|ref|ZP_04948311.1| Flagellar motor protein [Burkholderia dolosa AUO158]
gi|124899639|gb|EAY71482.1| Flagellar motor protein [Burkholderia dolosa AUO158]
Length = 214
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 13/158 (8%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ E L + + I+ + ++ L+ + +L+
Sbjct: 53 ARQQEAQQRKSLEQALAGPLAAGRVTLVNGRIGIS---GNVLFALNSDQLQPEGRALLKT 109
Query: 99 IATILNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSN 149
+A L + ++ + D +N +S +RA + LI GV ++
Sbjct: 110 LAGPLAAYLKTRDEILMVSGFADDQQVRAGNRLFADNWELSAKRALTVTRSLIDAGVPAS 169
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ F ++P+ +N GR N+R+EI PR +
Sbjct: 170 SVFAAA-FGSEHPVSSNADDEGRAKNRRVEIAPVPRKS 206
>gi|332665208|ref|YP_004447996.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332334022|gb|AEE51123.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 291
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 9/155 (5%)
Query: 45 SSLDKAEDEFQMQLQDTGI---VVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPMLQLI 99
+L + EFQ L + V I + + F S +E L+ I
Sbjct: 128 ETLQQIAKEFQDSLAKFPVAQYSVEVRNGKIVLALTESLLFKSGVSNRIEPNGQAALKAI 187
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNN---LLISQERADVIKSYLIQRGVSSNRFISVRG 156
T+LN P +I + HTD+ + N + RA + LI + G
Sbjct: 188 GTLLNANPVLLIQVLGHTDNQAASRKNLDSWDFTSLRAATVVRSLIDTHDLGANRVISGG 247
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI-FPRGNIKK 190
PI +N+T G+ N+R+E+ + FP ++++
Sbjct: 248 RGEFDPITSNETSEGQSRNRRVELSLFFPPEDLQR 282
>gi|78063303|ref|YP_373211.1| hypothetical protein Bcep18194_B2456 [Burkholderia sp. 383]
gi|77971188|gb|ABB12567.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 214
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 13/158 (8%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ E L + + I+ + ++ L+ +L+
Sbjct: 53 ARQQEAQQRKSLEQALAGPLAAGRVTLVNGRIGIS---GNVLFALNSDQLQPAGRDLLKT 109
Query: 99 IATILNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSN 149
+A L + ++ I D +N +S +RA + LI GV ++
Sbjct: 110 LAAPLGAYLKTRDEILMISGFADDQQVHAGNRQFTDNWELSAKRALTVTRALIDAGVPAS 169
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ F + P+ +N GR N+R+EI PR +
Sbjct: 170 SVFAAA-FGSEQPVSSNADDEGRAKNRRVEIAPVPRKS 206
>gi|89055525|ref|YP_510976.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88865074|gb|ABD55951.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 487
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 61/147 (41%), Gaps = 8/147 (5%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILN 104
+D Q ++ D + + R GD + + +F +E F+ + I L
Sbjct: 320 PIDTFIAFLQPEVDDGLVRLYREGDAVLVRVANAGAFGSGSAEIEDDFIDVFDRIGQALA 379
Query: 105 KFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ + HTD++ NN +S+ RA+ ++ L+Q + + G
Sbjct: 380 A-EDFAVTVLGHTDNVAIRTAPFPNNYFLSRARANAVRDVLLQYVDPV--RVDIEGQGPD 436
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRGN 187
PI +N T G++ N+R EI + G+
Sbjct: 437 RPIASNITPAGQEANRRTEILVREPGD 463
>gi|294140499|ref|YP_003556477.1| OmpA family protein [Shewanella violacea DSS12]
gi|293326968|dbj|BAJ01699.1| OmpA family protein [Shewanella violacea DSS12]
Length = 197
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 58/184 (31%), Gaps = 15/184 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+++ L + ++ C + ++ + E ++
Sbjct: 29 MQKTALVLITGLSLVACSTQTYVSEENLDKFAGIN-------------VEKFLIAEIVTE 75
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + H F L+ + L + ++N + I+ HTD G
Sbjct: 76 IKQILPPNKKVFISLISHFDF-DSSLLKDEDKMELDKLIALVNSL-DGKLVIKGHTDYQG 133
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N +S RA I+ YL + SV F PI + T N+R +
Sbjct: 134 SNAYNENLSMRRARTIQDYLEGQLTQGEYEYSVEHFGELQPIIESHTLQANALNRRAMVI 193
Query: 182 IFPR 185
+
Sbjct: 194 FTEK 197
>gi|156319761|ref|XP_001618159.1| hypothetical protein NEMVEDRAFT_v1g225448 [Nematostella vectensis]
gi|156197754|gb|EDO26059.1| predicted protein [Nematostella vectensis]
Length = 294
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I + +++ + K L I ++ + PS + ++SHTDS + + N +S +
Sbjct: 178 VFGIKIIYFDLNKSNIRKDAALELAKIVEVMKENPSIKVDVRSHTDSRQSAEYNEELSDK 237
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
RA ++++++ S ++ +G+ ++ ++ Q N+R E +
Sbjct: 238 RAKATVAWMVKK-GISADRLTAKGYGESQLVNKCSDGVECSEEEHQANRRSEFIVI 292
>gi|261253570|ref|ZP_05946143.1| sodium-type flagellar protein MotY precursor [Vibrio orientalis CIP
102891]
gi|260936961|gb|EEX92950.1| sodium-type flagellar protein MotY precursor [Vibrio orientalis CIP
102891]
Length = 293
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 39/109 (35%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + V L K+ L IA + + + S K+ ER
Sbjct: 180 IAFTILHYDRTSVELNKQSQKRLAQIAEYIKHNQDIDLVLVSTYTDAEDSKSASQNLSER 239
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + I V+G+ + PID N + +G+ N+R+ I +
Sbjct: 240 RAEVLQNYFKSLGLPEDRIRVQGYGKRRPIDDNASPIGKDRNRRVVISL 288
>gi|113970709|ref|YP_734502.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113885393|gb|ABI39445.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 290
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V L + L I L+ P + + ++TDS G N +S +
Sbjct: 177 IAFTVLNYDEGGTDLTRFSQQQLSRIQEYLSYDPDVELVLVDAYTDSYGGRSVNQKVSDK 236
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ +K + + G+ +R ++V G + + +N+ R N+R+ I+I
Sbjct: 237 RAESVKDFFVASGIPQDRIVTV-GHGERRHVASNEDIEERALNRRVVIRI 285
>gi|6977946|emb|CAB75338.1| OMP 16 protein [Pasteurella multocida]
Length = 130
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + +E +++ +L A LN P+T + ++ +TD GT + N+ +
Sbjct: 19 QDLQQRYNTVYFGFDKYNIEGEYVQILDAHAAFLNATPATKVVVEGNTDERGTPEYNIAL 78
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
Q RAD + + + +S + + P + N+R
Sbjct: 79 GQRRADAV-KHYLSAKGVQAGQVSTVSYGEEKPAVLGHDEAAYSKNRR 125
>gi|312961750|ref|ZP_07776248.1| phosphate transport system substrate-binding protein [Pseudomonas
fluorescens WH6]
gi|311284009|gb|EFQ62592.1| phosphate transport system substrate-binding protein [Pseudomonas
fluorescens WH6]
Length = 443
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 53/147 (36%), Gaps = 8/147 (5%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
N + E + + + ++R ++ L+ K L+
Sbjct: 302 AANGFIAQQVQAMAVEPRASMPEDYQAIARDAQRLSVNFR---FEEGSASLDNKARQDLR 358
Query: 98 LIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ L + + D+ + L+S+ RA ++ L++ GV +R
Sbjct: 359 RVVAYLKGHDKLDKQVTLVGFGDAKNDPQRAALLSKLRAMAVRRELVKNGVV---LREIR 415
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
GF + P+ N GR N+R+E+ +
Sbjct: 416 GFGAQMPVAANTADEGRIKNRRVEVWV 442
>gi|77456921|ref|YP_346426.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77380924|gb|ABA72437.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
Length = 166
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 4/139 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATIL 103
+ L+ G ++ G + V F S+V L K+ +++ I L
Sbjct: 28 APQKGLTPAQVAVLKQQGFELTDDGWE--FGLSGKVLFGSDVESLNKQSTEIVERIGKAL 85
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + HTD+ G N +S RA + + ++ I ++G + P+
Sbjct: 86 LGVGIERVRVDGHTDASGKETYNQQLSLRRAKSVSN-VLTSVGMKQENIQLQGLGSREPV 144
Query: 164 DTNDTKVGRQNNQRIEIQI 182
+NDT GR N+R+ I +
Sbjct: 145 ASNDTAAGRTENRRVSIVV 163
>gi|153873003|ref|ZP_02001734.1| outer membrane protein ompA [Beggiatoa sp. PS]
gi|152070531|gb|EDN68266.1| outer membrane protein ompA [Beggiatoa sp. PS]
Length = 301
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 42/117 (35%), Gaps = 7/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS-- 130
V S L++ LQ IA++L T++ ++ H+D+ + S
Sbjct: 184 VIVFRNLVFNTSTTTLKQASTRQLQKIASVLKMVDPTMVKVKGHSDAQPWRGRSQSESKR 243
Query: 131 -----QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ ++ +G+ P+ ++ N+R+EI++
Sbjct: 244 LNLKLSQQRAESVKNVLVNEGFPKNLTQAKGYGSNDPLVLGNSPAIWAKNRRVEIEV 300
>gi|296284884|ref|ZP_06862882.1| outer membrane protein [Citromicrobium bathyomarinum JL354]
Length = 210
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 64/188 (34%), Gaps = 21/188 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ + + + C + +D + + I V
Sbjct: 1 MIVLALGALLVACNSEEPSPAPTPTPSATGSDSPPEN-------------NSIIRPDIEV 47
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
R + L++ + L + + ++ H+D+ G +
Sbjct: 48 ERPPIALEPLRTTIPFGAGGTELDETAMAELNGLLDTDQWKQVERVILRGHSDAGGPDRV 107
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIE 179
N+ +S+ERA + +L+++ + I + F + P+ N + GR N+R+E
Sbjct: 108 NMRVSEERAQAVADWLMEQ-GLTEDQIRIIAFGAQNPVQPNLLPNGEPNERGRAANRRVE 166
Query: 180 IQIF-PRG 186
I I P+G
Sbjct: 167 ITILVPKG 174
>gi|284097464|ref|ZP_06385561.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3]
gi|283831026|gb|EFC35039.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3]
Length = 148
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + +P+L+ A +L + + + I+ H D GT++ NL + + R
Sbjct: 40 SLSDVFFGYDQYAIRSDAVPVLEEDAELLKSTYKDSAVLIEGHCDERGTVEYNLELGKRR 99
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
A +K YL+ I + + + P T + N+R
Sbjct: 100 AQAVKDYLVDL-GIEESRIRIVSYGKERPFCTESEPSCWRQNRR 142
>gi|91223761|ref|ZP_01259025.1| hypothetical protein V12G01_18492 [Vibrio alginolyticus 12G01]
gi|91191253|gb|EAS77518.1| hypothetical protein V12G01_18492 [Vibrio alginolyticus 12G01]
Length = 288
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 56/149 (37%), Gaps = 12/149 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + L T + + + + V + K++
Sbjct: 122 LNQLEQQLDYVLSQTTCTPPDDIEALRSDLNIVSDIYALLNIDNQFAVDSAEINPKYMGH 181
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L A IL P+ + + H D+ GT N ++Q RA+ +K + ++ ++ +
Sbjct: 182 LAEAAYILRDHPNLSLVVTGHADATGTPDYNQKLAQARAEQVKR-YLTVFGITSERVTTK 240
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P+ +T R N+R+ I++
Sbjct: 241 SVGDNLPLYEGETSAVRLTNRRVSIEVIS 269
>gi|89094432|ref|ZP_01167372.1| chemotaxis protein MotB [Oceanospirillum sp. MED92]
gi|89081324|gb|EAR60556.1| chemotaxis protein MotB [Oceanospirillum sp. MED92]
Length = 311
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 59/146 (40%), Gaps = 5/146 (3%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK-FLPMLQLIATILNKFP 107
+ E F +++ + V ++ + + F S L +L+ IA +L
Sbjct: 112 ELEVAFSQHIREGQLRVVGNDLWLSIELRSNYLFESGGALPNILADQLLEQIAGMLKDKS 171
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ---RGVSSNRFISVRGFAYKYPID 164
+ I ++ TD+ + + E + + +++ + + ++ G+ P
Sbjct: 172 N-PIHVEGFTDNQQISTDEFPSNWELSAARAAAVVRLLSQFGVNPEQMAAVGYGEFQPAY 230
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNIKK 190
+N T G++ N+R+ I + +++
Sbjct: 231 SNRTAEGQRLNRRVLIVVSRDEKVRR 256
>gi|323492355|ref|ZP_08097508.1| sodium-type flagellar protein MotY precursor [Vibrio brasiliensis
LMG 20546]
gi|323313402|gb|EGA66513.1| sodium-type flagellar protein MotY precursor [Vibrio brasiliensis
LMG 20546]
Length = 293
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 39/109 (35%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + V L K+ L IA + + + S K+ ER
Sbjct: 180 IAFTILHYDRTSVELNKQSQKRLAQIAEYIKHNQDIDLVLVSTYTDAEDSKSASQSLSER 239
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + I V+G+ + PID N + +G+ N+R+ I +
Sbjct: 240 RAEVLQEYFKSLGLPEDRIRVQGYGKRRPIDDNASPIGKDRNRRVVISL 288
>gi|313624928|gb|EFR94836.1| chemotaxis protein MotB [Listeria innocua FSL J1-023]
Length = 275
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 57/171 (33%), Gaps = 7/171 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A+ ++K + ++ + + + + I + + I +
Sbjct: 95 ATEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKITTKYSEEGLLITIRDDI 154
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE------R 133
F L + + I + + T+ I S + ++ S
Sbjct: 155 LFQSGSAELSADKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARA 214
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +++ + + + S RG+ P+ ND R+ N+R+EI + P
Sbjct: 215 VNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIATNREKNRRVEIMVRP 265
>gi|58617307|ref|YP_196506.1| peptidoglycan-associated lipoprotein precursor [Ehrlichia
ruminantium str. Gardel]
gi|58416919|emb|CAI28032.1| Peptidoglycan-associated lipoprotein precursor [Ehrlichia
ruminantium str. Gardel]
Length = 216
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I + + ++ +L+ + + P+T I I HTD+ GT + NL + ++RA+
Sbjct: 42 IDKVYFDLDKTVIKDSDKVLLEKLVQKAQEDPTTDIIIVGHTDTRGTDEYNLALGEQRAN 101
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYP---IDTNDT---KVGRQNNQRIEIQIFPRGN 187
++ ++I S + I+VR P + +N+ + N+R+ I +
Sbjct: 102 AVRDFIISCDKSLEKRITVRSKGKSEPAILVYSNNPKEAEDAHAKNRRVVITLVNNST 159
>gi|294673972|ref|YP_003574588.1| OmpA family protein [Prevotella ruminicola 23]
gi|294472547|gb|ADE81936.1| OmpA family protein [Prevotella ruminicola 23]
Length = 679
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I ++ L + L + +LN+ P+ I + +HTD G+ N +SQ+R
Sbjct: 519 VLIENIFYDFNKATLRPESKTALDQLVVLLNQNPNVTIELSAHTDCRGSEAYNQRLSQQR 578
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYP-------------IDTND--TKV-------- 170
A+ + +YLI + ++ +G+ P + D T+
Sbjct: 579 AESVVAYLIA-HGIAADRLTPKGYGESMPKRIKARVAEKYQFLKEGDVLTEEMINALPEE 637
Query: 171 ----GRQNNQRIEIQIF 183
Q N+R E ++
Sbjct: 638 LHEQCHQMNRRTEFKVL 654
>gi|218780334|ref|YP_002431652.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218761718|gb|ACL04184.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 387
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 14/168 (8%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI------ 68
I GC A K + T VN+ F + + + G+ +
Sbjct: 210 IGGCDAA--FDAKNLCSGAGMTQFVNQVFYNQPKAVPPKPNNDVDGDGVPNFKDRCPFTP 267
Query: 69 -----GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ I ++ ++ ++LP++ + ILN P I +Q H D+ G
Sbjct: 268 KGAAVNENGCWEIMGLTFDTNKADVKPEYLPLVYKVIPILNNNPGMKIELQGHADNRGAK 327
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
N +S+ RA+ +K L+ +GV + R +S +G+ + PI ND++
Sbjct: 328 DYNQGLSERRAESVKKILVDKGVDAGR-LSTKGWGFTKPIVPNDSEAN 374
>gi|313497453|gb|ADR58819.1| OmpA/MotB domain-containing protein [Pseudomonas putida BIRD-1]
Length = 326
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ L+ L +I + P+ + + H+D+ G N +S+
Sbjct: 172 VRQTQVGFPGGGIELDAAAKARLDVILDYMKADPTVNHVELNGHSDNSGNRLANRDLSRR 231
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + Y + I+VR +YP+ N++ R N+R+ I++
Sbjct: 232 RALAVADYFKAN-GVPDEQITVRFHGERYPLAKNNSASNRARNRRVNIEL 280
>gi|114321676|ref|YP_743359.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114228070|gb|ABI57869.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 216
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 57/193 (29%), Gaps = 17/193 (8%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-------SSLDKAEDEFQMQL 58
GL M M +SG A + V FG + +
Sbjct: 21 GLVMAGMLAVSGAAFAGGHDSGQGFLTDTRGNEVRSGFGLCWGVTWETATQPPACLDEPE 80
Query: 59 QDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSH 116
+ ++ + F L L+ + +N I + H
Sbjct: 81 PEPAPEPEPEPELERISVDSEALFGFDSDELTPGGRANLRNVIERINAMERVDSIRVNGH 140
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK------- 169
TD IG+ N +S+ RA + + + + I+ RG+ P+
Sbjct: 141 TDHIGSAAYNQELSERRAAAV-RTFMVQQGVDDNLITSRGYGEDRPVKECPDNLSGSALI 199
Query: 170 VGRQNNQRIEIQI 182
N+R+EI +
Sbjct: 200 ECLAPNRRVEIHV 212
>gi|88811687|ref|ZP_01126941.1| hypothetical protein NB231_04760 [Nitrococcus mobilis Nb-231]
gi|88791078|gb|EAR22191.1| hypothetical protein NB231_04760 [Nitrococcus mobilis Nb-231]
Length = 237
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 69/204 (33%), Gaps = 24/204 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ +F+ I+ A +E+ ++ + + + + + +D+ +
Sbjct: 29 LMMVFMFIAIALMRNAFQERDQIREIAVAYQENQVAIYNALMKEFKDDL----AHWNASI 84
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI----LNKFPST--VIAIQSHTDS 119
R P + V + +F +L+ L F + + I+ HT S
Sbjct: 85 DRDSLAFRFKSPDVLFEVGSAEIRPRFKDILEDFFPRYLGILKGFKDSIDEVRIEGHTSS 144
Query: 120 IGT--------LKNNLLISQERADVIKSYLIQRGVSS------NRFISVRGFAYKYPIDT 165
N+ +SQ R + ++ + R + GF+ PI
Sbjct: 145 TWNQRVTDTKAYFLNMELSQGRTRSVLQHVYRMPSIRGDQPWVQRQFAAVGFSSSRPILR 204
Query: 166 NDTKVGRQNNQRIEIQIFPRGNIK 189
D K R +++R+ ++ I+
Sbjct: 205 PDGKEDRAHSRRVTFRVITNAEIQ 228
>gi|32472143|ref|NP_865137.1| outer membrane protein A (OmpA) [Rhodopirellula baltica SH 1]
gi|32397515|emb|CAD72821.1| probable outer membrane protein A (OmpA) [Rhodopirellula baltica SH
1]
Length = 259
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 16/182 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSL----------DKAEDEFQMQLQDTGIVVSRIG 69
+ ++ + + D + F +S + ++ +L G+ V + G
Sbjct: 76 SDTTQQYESARIAAQDAQTQARSFQASAQMRGGATIRANTNLNQMAGRLNLGGLKVEQDG 135
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTDSIGTLK--- 124
+++ +P F L+ +L A L FP I I+ +TD+
Sbjct: 136 EVLRVVLPSDQLFAQGTGQLQPSAGAILDPTAAQLRSVFPRQRIGIEGYTDNAPMYGGAA 195
Query: 125 -NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ ++ + + +L +R + + P N T GR N+RIE+ I+
Sbjct: 196 GSAHQLTSAQTGAVLDWLTRRSGMPEQQLFTVAQGSNNPRKDNTTPAGRVANRRIELVIY 255
Query: 184 PR 185
P
Sbjct: 256 PE 257
>gi|296124309|ref|YP_003632087.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776]
gi|296016649|gb|ADG69888.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776]
Length = 275
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 55/160 (34%), Gaps = 12/160 (7%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQL 98
+ L ++ +L+ ++ F + + +LQ
Sbjct: 106 TSSSKNPLSTDANQRMEELRRKYPDFEFDPQTGVSKFQENLLFASGSDEIRPEAYALLQE 165
Query: 99 IATILN--KFPSTVIAIQSHTDSIGTLKN--------NLLISQERADVIKSYLIQRGVSS 148
A I+N + + HTD + N +S +RA+ + +++ +
Sbjct: 166 FARIMNSADSKHLKVLVVGHTDDKPISRKAVADKHPTNWHLSTDRANSVV-LALKKSGLA 224
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ + G++ P+ N RQ N+R+EI + +
Sbjct: 225 EQRMGAAGYSLFQPLAPNSDDKNRQKNRRVEIFVLAPDAV 264
>gi|197336843|ref|YP_002157778.1| chemotaxis MotB protein [Vibrio fischeri MJ11]
gi|197314095|gb|ACH63544.1| chemotaxis MotB protein [Vibrio fischeri MJ11]
Length = 213
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 73/195 (37%), Gaps = 14/195 (7%)
Query: 1 MIKEL-GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+ +++ + + ++ + K+ K IV+ + + + Q ++
Sbjct: 17 MMTYSDAITLLLAFFVLIVAVSQVNEGKLEELKDGWGKIVDTAAHLPMQELTADIQEIVE 76
Query: 60 D---TGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAI 113
+VV+ + D I + ++ L+ + ++ A + + I +
Sbjct: 77 QKNLDSVVVTAVTDGIRIDLDSENLYDSGSASLKPEGKALISEFAEAMKEVDLNGRSIIV 136
Query: 114 QSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-- 167
+ H+D + +N +S RA + LI+ V ++ + +A P
Sbjct: 137 EGHSDDLPIHTKQFDSNWELSGARAIEVTKQLIKFNVDKSQ-LRAVAYADAQPRADKALP 195
Query: 168 TKVGRQNNQRIEIQI 182
+ RQ N+R+ I I
Sbjct: 196 IEQQRQLNRRVVIYI 210
>gi|192360106|ref|YP_001981638.1| OmpA family protein [Cellvibrio japonicus Ueda107]
gi|190686271|gb|ACE83949.1| OmpA family protein [Cellvibrio japonicus Ueda107]
Length = 576
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L+ K L L+ + + + + +DS G NL +S RA V++ +
Sbjct: 477 FKDGSDQLDSKSLSDLERLVKYVEVNAPKRLQLFGFSDSEGDKHENLALSLRRAKVVEDH 536
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
LI+RG+ + +G + P+ ++DT+ GR N+R+E+ I
Sbjct: 537 LIKRGIYP---LVAKGMGDEAPLASSDTEAGRHINRRVEVWIL 576
>gi|148258147|ref|YP_001242732.1| hypothetical protein BBta_6939 [Bradyrhizobium sp. BTAi1]
gi|146410320|gb|ABQ38826.1| Putative flagellar motor protein MotB [Bradyrhizobium sp. BTAi1]
Length = 342
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 13/140 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
+ + +GD + L + L +AT L + P S
Sbjct: 205 AILGNRPDIRVVGDRFVFQ-SEVFFDTGQATLLPEGQQELNSVATALVDLDKQIPAEISW 263
Query: 110 VIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
V+ + HTD + K+N +S RA + YLI GV + R ++ GFA P+D
Sbjct: 264 VLRVDGHTDVRPINSPVFKSNWELSSARAISVVQYLISLGVPAQRLVAA-GFAEFQPLDP 322
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
+T+ + N+RIE+++ R
Sbjct: 323 GNTEDAFRRNRRIELKLTER 342
>gi|326773952|ref|ZP_08233234.1| OmpA family protein [Actinomyces viscosus C505]
gi|326636091|gb|EGE36995.1| OmpA family protein [Actinomyces viscosus C505]
Length = 199
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 62/175 (35%), Gaps = 10/175 (5%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQDTGIVVSRIGDMIT 73
++ ++ + N R ++D+ + D+ + S G
Sbjct: 25 LAAASNSATADPTTITKQPESAGPGNPRVAQTVDRVVTPVSRSSSSDSAVTYSSDGQTTV 84
Query: 74 CYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ V+F L + +L I N P + + HTDS+ +N +S++
Sbjct: 85 ASLSGDVTFDVDSSALTDRAKQVLDEIVKRWNGKPPATVTVVGHTDSVADDAHNQTLSEQ 144
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND------TKVGRQNNQRIEIQ 181
RA + YL + + + G P+ + + G+ N+ ++++
Sbjct: 145 RAKAVADYLTSK--VPSLNVQSSGKGESEPVASETNADGSVNEAGKAANRHVDVR 197
>gi|302338591|ref|YP_003803797.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301635776|gb|ADK81203.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 1410
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 58/137 (42%), Gaps = 18/137 (13%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVF-------LEKKFLPMLQLIATILNKFPSTVIAIQS 115
++V R G+++ I + ++ + ++ +L +A IL K+ S I ++
Sbjct: 1271 VLVVREGNLLKIKIASIIFQPNKAEFVEDDPEVAERNRYVLDRLAEILQKYRSYQIMVEG 1330
Query: 116 HTDSIGTLKNN----------LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
H I + +SQ RA+ + L++RG+ NR +V G P+
Sbjct: 1331 HAALINWADPVKAEREEQTELMPLSQARAEKVVEALVERGIDRNRLDAV-GVGGTKPLVP 1389
Query: 166 NDTKVGRQNNQRIEIQI 182
+ R N+R+E +
Sbjct: 1390 HSDIENRWKNRRVEFIL 1406
>gi|57239289|ref|YP_180425.1| peptidoglycan-associated lipoprotein precursor [Ehrlichia
ruminantium str. Welgevonden]
gi|58579253|ref|YP_197465.1| peptidoglycan-associated lipoprotein precursor [Ehrlichia
ruminantium str. Welgevonden]
gi|57161368|emb|CAH58291.1| hypothetical protein Erum5620 [Ehrlichia ruminantium str.
Welgevonden]
gi|58417879|emb|CAI27083.1| Peptidoglycan-associated lipoprotein precursor [Ehrlichia
ruminantium str. Welgevonden]
Length = 217
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I + + ++ +L+ + + P+T I I HTD+ GT + NL + ++RA+
Sbjct: 42 IDKVYFDLDKTVIKDSDKVLLEKLVQKAQEDPTTDIIIVGHTDTRGTDEYNLALGEQRAN 101
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYP---IDTNDT---KVGRQNNQRIEIQIFPRGN 187
++ ++I S + I+VR P + +N+ + N+R+ I +
Sbjct: 102 AVRDFIISCDKSLEKRITVRSKGKSEPAILVYSNNPKEAEDAHAKNRRVVITLVNNST 159
>gi|319951894|ref|YP_004163161.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319420554|gb|ADV47663.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 647
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + ++ K +++ + LN++P+T I I SHTD+I N +S+ R
Sbjct: 533 LNLEKIYFDFDQSYIRKDAQIIMEKVIAYLNQYPNTKIRIGSHTDAIANDAYNSRLSERR 592
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-----NDTKVGRQNNQRIEIQIF 183
A YL+++G++++R ++ +GF + N + Q N+R E +
Sbjct: 593 AKATYEYLVKKGIAASR-LTFKGFGETQLNNECKNTVNCSAEKHQLNRRSEFIVI 646
>gi|262197467|ref|YP_003268676.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262080814|gb|ACY16783.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 540
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 14/174 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
E DTD D G V+ + +
Sbjct: 363 PEESGPPENRGCPDTDADGDTIVDREDNCPTLPTDGRGKAGCPVAYVEGDQIIILDKVHF 422
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
E + P+L+ +A +L P + I+ HTD + NL +SQ R + + +
Sbjct: 423 ATDEDVILDDSKPVLEAVAQVLRTRPDIERVRIEGHTDVRASDAYNLDLSQRRVNSVMQF 482
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTND---------TKVG-R--QNNQRIEIQI 182
LI + +G+ + PI + R N+R+E I
Sbjct: 483 LID-SGVGAERLEAKGWGHTRPIIDDAHCDRPDEQLDAECTRLTSMNRRVEFHI 535
>gi|238761919|ref|ZP_04622893.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia kristensenii ATCC 33638]
gi|238700033|gb|EEP92776.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia kristensenii ATCC 33638]
Length = 169
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 52/175 (29%), Gaps = 26/175 (14%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
+ + GC + E LQ+ G ++
Sbjct: 19 ALCLLVLVGCQAKPHQ------------------------GLTPEQIAALQEQGFKLTDN 54
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
G + L + +Q I L+ + + HTD++G N
Sbjct: 55 GWEFGL-ANKVLFDSDVRKLNASGVQTVQHIGRALHNVGINHMRVDGHTDAMGEDGYNQK 113
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S ERA + + I V G P+ N T GR N+R+ + +
Sbjct: 114 LSYERASAVAD-SLAAIGIPRANIEVHGRGKLEPVADNRTSKGRAENRRVAMIVT 167
>gi|114706609|ref|ZP_01439510.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
gi|114538001|gb|EAU41124.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
Length = 344
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------ST 109
++ + +GD + L+ L +A+ + +
Sbjct: 206 EILADRENIRIVGDRFVFQ-SEVLFPSGSADLQTAGTDELDQMASAIRDLAREIPSDINW 264
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
++ + HTD+ G +N +S RA + YLI + ++ GF PI+
Sbjct: 265 IVRVDGHTDNVPLSGTGQFDDNWELSVARASSVVKYLISQ-GVQAEHLAATGFGEFQPIE 323
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
T R+ N+RIE ++ R
Sbjct: 324 EGSTPEVRRRNRRIEFKLTER 344
>gi|144897998|emb|CAM74862.1| conserved hypothetical protein, secreted [Magnetospirillum
gryphiswaldense MSR-1]
Length = 198
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 48/156 (30%), Gaps = 7/156 (4%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH------VSFVSEV 86
+ + G+ D+A+ + + P
Sbjct: 43 AGTQVVATPGSGTGADRADAKPADVFAVPEKDIQDRFGQAIKAQPRTPKSFLLYFQFQST 102
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
L + +L + + P+ ++I HTD +G K N + RA + ++
Sbjct: 103 DLTPESKALLPSVLDEVKARPAPDLSIIGHTDGMGDAKYNYELGLRRAKEV-QSMVTALG 161
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
R I V P+ G N+R+E+ +
Sbjct: 162 IEPRMIEVTSHGQSNPLVPEAKGKGEAKNRRVEVTV 197
>gi|126665323|ref|ZP_01736305.1| hypothetical protein MELB17_22060 [Marinobacter sp. ELB17]
gi|126629951|gb|EBA00567.1| hypothetical protein MELB17_22060 [Marinobacter sp. ELB17]
Length = 348
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 53/153 (34%), Gaps = 14/153 (9%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ + L + +GD + L + L +A +L
Sbjct: 199 EQYQSEFFSRLRNILAANE-NIRIVGDRFLLP-SELLFASGSALLGAEGKRELDKLAGVL 256
Query: 104 NKFPS-------TVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
++ I HTD + +N +S RA + YL + V NR +
Sbjct: 257 LDVVETIPADLEWILRIDGHTDRIPINTPQFPSNWELSTARAVAVVRYLADQSVPQNRMV 316
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ GF +P+ T Q N+RIEI++ R
Sbjct: 317 AA-GFGEFFPVADGTTPEALQENRRIEIKLTDR 348
>gi|45658882|ref|YP_002968.1| flagellar motor protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|45602127|gb|AAS71605.1| flagellar motor protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
Length = 223
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 67/207 (32%), Gaps = 27/207 (13%)
Query: 4 ELGLSMFIMTTISGCGLASR--------EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+ + +F + + C S+ E+ K+ + R L + ++E
Sbjct: 2 KFKIFIFAILFLINCVSNSKYESLLKSYEESKLENQRILGEKGDLSRSLEELKRIQEESD 61
Query: 56 MQLQD--------------TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIA 100
++Q+ + + I + + + F L ++ +
Sbjct: 62 RRIQEYKALMSTFRFLIDAGKLKIKIIDGRMVVVLSSDILFPIGSAHLSPAGTAAIKEVT 121
Query: 101 TILNKFPSTVIAIQSHTDSIG---TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
T+L I+ HTD N ++ RA + +I + IS
Sbjct: 122 TLLASLEGKRFQIEGHTDDTPTGIKGYTNWELASSRALNVLHTMI-KAGMPEVRISAASM 180
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFP 184
P N + R +N+RIEI I P
Sbjct: 181 GASRPALPNTSPENRSSNRRIEIVIVP 207
>gi|59713370|ref|YP_206145.1| flagellar motor protein MotB2 [Vibrio fischeri ES114]
gi|59481618|gb|AAW87257.1| flagellar motor protein MotB2 [Vibrio fischeri ES114]
Length = 213
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 73/195 (37%), Gaps = 14/195 (7%)
Query: 1 MIKEL-GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+ +++ + + ++ + K+ K +V+ + + + Q ++
Sbjct: 17 MMTYSDAITLLLAFFVLIVAVSQVNEGKLEELKDGWGKVVDTAAHLPMQELTADIQEIVE 76
Query: 60 D---TGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAI 113
+VV+ + D I + ++ L+ + ++ A + + I +
Sbjct: 77 QKNLDSVVVTAVTDGIRIDLNSENLYDSGSASLKPEGKALISEFAEAMKEVDLNGRSIIV 136
Query: 114 QSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-- 167
+ H+D + +N +S RA + LI+ V ++ + +A P
Sbjct: 137 EGHSDDLPIHTKQFDSNWELSGARAIEVTKQLIKFNVDKSQ-LRAVAYADAQPRADKALP 195
Query: 168 TKVGRQNNQRIEIQI 182
+ RQ N+R+ I I
Sbjct: 196 IEQQRQLNRRVVIYI 210
>gi|124266540|ref|YP_001020544.1| putative peptidoglycan-associated lipoprotein [Methylibium
petroleiphilum PM1]
gi|124259315|gb|ABM94309.1| putative peptidoglycan-associated lipoprotein precursor
[Methylibium petroleiphilum PM1]
Length = 179
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 9/165 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + + ++ GS+ ++ + V
Sbjct: 22 GCSSPVKLDEPPVESRTAAPVGGAGAGGSASGTSQSQVAN--------VDLSAQQAGALG 73
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V ++ ++ P++ + +LN + I+ HTD G + NL + Q+RA+
Sbjct: 74 KVVYFDFDSFLVKDEYRPIVDNYSKVLNSDRKKRVVIEGHTDERGGREYNLALGQKRAEA 133
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ L GV + SV + + P T + N+R E++
Sbjct: 134 VAKSLTLLGVQDGQIESVS-YGKERPAVTGSDEAAWAKNRRAELR 177
>gi|312796631|ref|YP_004029553.1| Chemotaxis motB protein [Burkholderia rhizoxinica HKI 454]
gi|312168406|emb|CBW75409.1| Chemotaxis motB protein [Burkholderia rhizoxinica HKI 454]
Length = 216
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 60/163 (36%), Gaps = 14/163 (8%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGI---VVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ N+ ++ + Q+ + V+ + I + ++ L+ +
Sbjct: 45 SAKLENEVRQRQMETQRRKTLEQVLAGPLAAGRVTLVNGRIGIS-GSVLFALNSDQLQPE 103
Query: 92 FLPMLQLIATILNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLI 142
+L+ +A L + ++ + D +N +S +RA + I
Sbjct: 104 GRELLKSLAKPLRSYLSARDEILMVSGFADDQQVRAGNRRFADNWELSAQRALTVTRAFI 163
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
GV ++ + F + P+ +N GR N+R+EI PR
Sbjct: 164 SEGVPASSVFAAA-FGSEQPVSSNADDAGRARNRRVEIAAVPR 205
>gi|26987823|ref|NP_743248.1| OmpA family outer membrane protein [Pseudomonas putida KT2440]
gi|24982522|gb|AAN66712.1|AE016299_8 outer membrane protein, OmpA family [Pseudomonas putida KT2440]
Length = 317
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ L+ L +I + P+ + + H+D+ G N +S+
Sbjct: 176 VRQTQVGFPGGGIELDAAAKARLDVILDYMKADPTVNHVELNGHSDNSGNRLTNRDLSRR 235
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + Y I+VR +YP+ N++ R N+R+ I++
Sbjct: 236 RALAVADYFKAN-GVPEEQITVRFHGERYPLAKNNSASNRARNRRVNIEL 284
>gi|46202032|ref|ZP_00053894.2| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum
MS-1]
Length = 274
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 62/185 (33%), Gaps = 16/185 (8%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF---QMQLQDTGIVVSR 67
+ + +E+K ++ L K EF ++ +
Sbjct: 88 VTAALDASEARDKEQKAQIADLGKRLNVALAGKVEELQKYRSEFFGRLRKVLGDHPGIRI 147
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLP-------MLQLIATILNKFPSTVIAIQSHTDSI 120
GD + L + + L+ IA + K + V+ I HTD
Sbjct: 148 EGDRFIFQ-SELLFATGSADLGPEGVEQVGRLAATLKDIAKTMPKGVNWVLRIDGHTDRR 206
Query: 121 GT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+N +S RA + L GV +R ++ GF P+D D + N+
Sbjct: 207 PMVSGRYPSNWELSTARAITVLRTLAANGVPKDR-LAAAGFGEFQPVDPADNEAAYAKNR 265
Query: 177 RIEIQ 181
RIEI+
Sbjct: 266 RIEIR 270
>gi|296156377|ref|ZP_06839215.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295892976|gb|EFG72756.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 215
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 57/152 (37%), Gaps = 13/152 (8%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
E L + + I+ + ++ L+ + +L+ +A
Sbjct: 58 ETQRRKTLEQALAGPLAAGRVTLVNGRIGIS---GNVLFALNSDQLQPQGRDLLKSLAGP 114
Query: 103 LNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRFIS 153
L+ + ++ + TD + +N +S +RA + LI GV ++ +
Sbjct: 115 LSAYLRANDEILMVSGFTDDQRLREGNRRFADNWELSAQRALTVTRALIDDGVPASSLFA 174
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
F P+ +N + GR N+R+EI PR
Sbjct: 175 AA-FGSGQPVSSNADEQGRAKNRRVEIAPVPR 205
>gi|220917668|ref|YP_002492972.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955522|gb|ACL65906.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 259
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 7/126 (5%)
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD--- 118
+ V G +T + F + L + L +L IA + + ++ HTD
Sbjct: 119 VSVLVEGRRLTVRLAATEFFDPGQAALRPQALALLDAIAVEIVPL-ERPLRVEGHTDETP 177
Query: 119 --SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
S G +N +S RA + YL Q + ++ G +P+ T+ T + N+
Sbjct: 178 VGSGGRWMSNWELSATRAATVVGYLEQAHAARPALLAAVGLGSAHPLSTDATPEAHERNR 237
Query: 177 RIEIQI 182
R+E+ +
Sbjct: 238 RVELVL 243
>gi|71280941|ref|YP_267837.1| flagellar motor protein MotB [Colwellia psychrerythraea 34H]
gi|71146681|gb|AAZ27154.1| sodium-driven polar flagellar protein [Colwellia psychrerythraea
34H]
Length = 314
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 6/138 (4%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
+ ++ + K ++ + Q+QD I + +G + I + SF FL+ KF P+
Sbjct: 149 EAAQEQVNELVKKIAEQLEQQIQDGAIELESLGQQVIIRIRENGSFPSGSAFLQPKFWPV 208
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRF 151
++ I +LN P I I HTD+ G N +S +RA I LI+
Sbjct: 209 IREIGELLNTVPG-EIMISGHTDNRGVDSELFSSNWDLSSKRAVAIAHQLIKVPDFDATR 267
Query: 152 ISVRGFAYKYPIDTNDTK 169
+ G A P+ N
Sbjct: 268 LVAAGHADTRPLVPNTNA 285
>gi|50119379|ref|YP_048546.1| putative porin [Pectobacterium atrosepticum SCRI1043]
gi|49609905|emb|CAG73343.1| putative porin [Pectobacterium atrosepticum SCRI1043]
Length = 506
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 68/174 (39%), Gaps = 7/174 (4%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE-----FQMQLQDTGIVVSRI 68
++G + + V + +L K E LQ +
Sbjct: 51 LVTGDAKKAVAGGLLGGAAGCALGNVWQNREEALAKIAQEENIAITTRSLQSQEKSGTET 110
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTDSIGTLKNNL 127
++ + + L L ++ IAT + + S VI + HTD+ G+ + N
Sbjct: 111 VGLVAQVQDSGMFDTNSAQLSTDGLRQVKKIATAMKEGDQSGVILVVGHTDATGSAEWNQ 170
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S++RA + ++++ S + + +G P+ N T GR +N+R+EI
Sbjct: 171 RLSEQRAQNVGR-VLEQAGLSAQKLYFQGAGSARPVADNVTITGRTSNRRVEIV 223
>gi|325529870|gb|EGD06709.1| hypothetical protein B1M_00030 [Burkholderia sp. TJI49]
Length = 214
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 13/151 (8%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ E L + + I+ + ++ L+ + +L+
Sbjct: 53 ARQQEAQQRKSLEQALAGPLAAGRVTLVNGRIGIS---GNVLFALNSDQLQPEGRDLLKT 109
Query: 99 IATILNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSN 149
+A L + ++ I D +N +S +RA + LI GV ++
Sbjct: 110 LAGPLAAYLKTRDEILMISGFADDQQVRAGNRLFADNWELSAKRALTVTRALIDAGVPAS 169
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ F + P+ +N GR N+R+EI
Sbjct: 170 SVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199
>gi|298488736|ref|ZP_07006765.1| Outer membrane protein, OmpA family [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298156809|gb|EFH97900.1| Outer membrane protein, OmpA family [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 301
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L + L P+ I + H+D+ G N +S+
Sbjct: 171 VKQAEVGFPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + Y + + I++R +YP+ N + R N+R+ + +
Sbjct: 231 RALAVMDYFKAQ-GIPEQQITLRFHGERYPLVPNTNEANRARNRRVNVHL 279
>gi|332524171|ref|ZP_08400398.1| outer membrane protein, ompa family [Rubrivivax benzoatilyticus
JA2]
gi|332107507|gb|EGJ08731.1| outer membrane protein, ompa family [Rubrivivax benzoatilyticus
JA2]
Length = 178
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 2/124 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G+ GD + + + F + L + L + L + + ++ HTD+
Sbjct: 54 QGLGFRPEGDDWQLDLSMALLFEFDADRLAPLQIERLGRLGRELAEAGIHRMHVEGHTDN 113
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+G N +S RA + + + VRG PI N + GR N+R+
Sbjct: 114 VGAASYNQALSLRRAASVAR-ALSGAGFDAAGLQVRGLGAARPIADNTNEAGRARNRRVT 172
Query: 180 IQIF 183
+ +
Sbjct: 173 LIVV 176
>gi|307726202|ref|YP_003909415.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. CCGE1003]
gi|307586727|gb|ADN60124.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. CCGE1003]
Length = 445
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 54/190 (28%), Gaps = 9/190 (4%)
Query: 5 LGLSMFIMTT--ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ + F+ ++ + S + + + Q
Sbjct: 257 VVIGAFLYFFTRLNALAEPVGAQLAAIGPGSAPPPGNAAAPKPARNSLKALLAPLEQSGA 316
Query: 63 IVVSR--IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ V G + L +P+L+ +A+ LN+ VI + HTD
Sbjct: 317 LTVDEQSDGRDTIRLAAGALFPSGGADLAPDEIPLLRRVASALNQVRGRVIVV-GHTDDQ 375
Query: 121 GTLKNNLLISQERADVIKSYLIQ---RGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQ 176
+ + + +G+ R + G P+ D R N+
Sbjct: 376 PVHSLRFKDNFALSTARAQNTLAVLAQGLDDPRRLEANGAGSSQPVATPADLPANRARNR 435
Query: 177 RIEIQIFPRG 186
R+EI P
Sbjct: 436 RVEILFIPEN 445
>gi|167839895|ref|ZP_02466579.1| hypothetical protein Bpse38_24699 [Burkholderia thailandensis
MSMB43]
Length = 215
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 13/152 (8%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
E L + + I+ + ++ L+ +L+ +A
Sbjct: 58 ESQRRKTLEQALAGPLAAGRVTLVNGRIGIS---GSVLFALNSDELQPAGRDLLKSLAGP 114
Query: 103 LNKF---PSTVIAIQSHTDS------IGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L + ++ + D +N +S +RA + I GV + +
Sbjct: 115 LAAYLDANHEILMVSGFADDLQVRTGNRRFADNWELSAKRALTVTRAFIDEGVPAASVFA 174
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
F + P+ N GR N+R+EI PR
Sbjct: 175 AA-FGSEQPVSPNSDDAGRAKNRRVEIAPVPR 205
>gi|37704616|gb|AAR01580.1| OprF [Pseudomonas sp. MFY63]
Length = 297
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 37/87 (42%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P T ++ HTDS+G N +S+ RA+ +
Sbjct: 211 DVKFDFDKSVVKPNSYADIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSERRANAV 270
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPID 164
K L + + + G+ P+
Sbjct: 271 KQVLTSQYGVESSRVQSVGYGESRPVA 297
>gi|330820825|ref|YP_004349687.1| OmpA/MotB [Burkholderia gladioli BSR3]
gi|327372820|gb|AEA64175.1| OmpA/MotB [Burkholderia gladioli BSR3]
Length = 228
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 63/190 (33%), Gaps = 15/190 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L ++ + G+ + + + D + E L +
Sbjct: 22 LMAALLGAFVLILVGVIGMQLE--ASSRLADEVRQRQVETQRRKTLEQALAGPLAAGRVT 79
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF---PSTVIAIQSHTDSI- 120
+ D + V+ L+ + +L+ +A L + ++ + D
Sbjct: 80 LV---DGRIGIAGNVLFAVNSDQLQPEGRDLLRSLAGPLTAYLHDRDQILMVSGFADDQL 136
Query: 121 -----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+N +S ERA + I GV + + F + P+ +N + GR N
Sbjct: 137 VRAGNRRFADNWELSAERALTVTRAFIDSGVPAASVFAAA-FGSEQPVSSNADEAGRARN 195
Query: 176 QRIEIQIFPR 185
+R+EI PR
Sbjct: 196 RRVEIAAVPR 205
>gi|255023068|ref|ZP_05295054.1| motility protein (flagellar motor rotation) MotB [Listeria
monocytogenes FSL J1-208]
Length = 275
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 57/171 (33%), Gaps = 7/171 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A+ ++K + ++ + + + + + + + I +
Sbjct: 95 ATEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDDI 154
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE------R 133
F L + + I + + T+ I S + ++ S
Sbjct: 155 LFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARA 214
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +++ + + + S RG+ P+ ND R+ N+R+EI + P
Sbjct: 215 VNFMEAIIQENNEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRP 265
>gi|114571128|ref|YP_757808.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
gi|114341590|gb|ABI66870.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
Length = 329
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 12/139 (8%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-------T 109
+ V +GD + L + L+ IA + +
Sbjct: 193 AILGNRTGVRIVGDRFVFE-TDVLFPSGSAALSNEGRESLRPIADAIIQLTDEIPSDLEW 251
Query: 110 VIAIQSHTDSIGT---LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
VI I HTD + +N +S RA + +++ GV SNR ++ GF YP+
Sbjct: 252 VIRIDGHTDPVPIRTTYPSNWHLSAARAISVVNWMEDLGVPSNRLVAA-GFGEHYPMVEG 310
Query: 167 DTKVGRQNNQRIEIQIFPR 185
+ N+RIE+++ R
Sbjct: 311 RSAEANARNRRIELKLTAR 329
>gi|107103038|ref|ZP_01366956.1| hypothetical protein PaerPA_01004107 [Pseudomonas aeruginosa PACS2]
Length = 314
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L L +I +L PS I + H+D+ G N +S+
Sbjct: 164 VKLAQVGFPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDNSGNRLTNRDLSRR 223
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA + ++ I+VR + +YP+ N++ R N+R+ + + ++
Sbjct: 224 RALAV-QEYLKSNGVPESQINVRFYGERYPLVANNSAANRARNRRVTVHLSREAVVE 279
>gi|217965216|ref|YP_002350894.1| chemotaxis protein MotB [Listeria monocytogenes HCC23]
gi|217334486|gb|ACK40280.1| chemotaxis protein MotB (Motility protein B) [Listeria
monocytogenes HCC23]
gi|307570225|emb|CAR83404.1| chemotaxis protein [Listeria monocytogenes L99]
Length = 275
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 58/171 (33%), Gaps = 7/171 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A+ ++K + ++ + + + + T + + + I +
Sbjct: 95 ATEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDDI 154
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE------R 133
F L + + I + + T+ I S + ++ S
Sbjct: 155 LFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARA 214
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +++ + + + S RG+ P+ ND R+ N+R+EI + P
Sbjct: 215 VNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRP 265
>gi|37704632|gb|AAR01588.1| OprF [Pseudomonas sp. MFY78]
Length = 317
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 10/152 (6%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G G +D N ++DK D + V G +
Sbjct: 172 GGGSKPAAAPAPAPVADVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEV 225
Query: 77 P----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ ++ +A + ++PST ++ HTDS+G N +S+
Sbjct: 226 VRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHTDSVGPDAYNQKLSER 285
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
RA +K L + + + G+ P+
Sbjct: 286 RASAVKQVLTGQYGVESSRVQSVGYGESRPVA 317
>gi|260062573|ref|YP_003195653.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501]
gi|88784140|gb|EAR15310.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501]
Length = 375
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 53/167 (31%), Gaps = 9/167 (5%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV---S 81
+++ + + R ++ Q + + D + +
Sbjct: 208 QRRQDSIRQAEEAAEQARLLQEQEEQRLAAQREEAARKAAEAARKDALKRELDSIGGLRF 267
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+L+ + L+ IA + + P +IQ+H DS G K N +++ RA +
Sbjct: 268 AFDSSYLDAEAKAKLEAIAAFMKRNPELTFSIQAHADSRGPEKYNQWLTERRAQRVAD-Y 326
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
+ + V G ++ T N+R + I
Sbjct: 327 LTGEGIRMERLQVEGLGESQLLNHCSDGVRCTAAEHAVNRRGVVYIL 373
>gi|294139825|ref|YP_003555803.1| OmpA family protein [Shewanella violacea DSS12]
gi|293326294|dbj|BAJ01025.1| OmpA family protein [Shewanella violacea DSS12]
Length = 210
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/184 (21%), Positives = 65/184 (35%), Gaps = 10/184 (5%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDT------DIVNKRFGSSLDKAEDEFQMQL 58
L L F IS A ++ + + D D++ G + +
Sbjct: 27 LTLLFFTGLVISPATFAWNDRDQDGVPDIKDACPNTSKDVLVDASGCDKSRLFKPICLTT 86
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
D I + + ++ + +L I L + + HTD
Sbjct: 87 TDKQIYPDTCIEADDLTLN---FEFAKAEVSYSQWQVLAQIKQFLQLN-DVDLCLIGHTD 142
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
SIG L+ N +S+ RA + L++ VRG + PI TNDT GR N+R+
Sbjct: 143 SIGNLEANQRLSEARAKSVMRILVEDYGFEPGRFIVRGMGTRSPIGTNDTPGGRTLNRRV 202
Query: 179 EIQI 182
+
Sbjct: 203 NFLV 206
>gi|262171987|ref|ZP_06039665.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus
MB-451]
gi|261893063|gb|EEY39049.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus
MB-451]
Length = 286
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
V L K L IA + ++ + ++TDS T N+ +S++RA+ +
Sbjct: 183 DSVELNKASQKRLAQIAEYVRYNSDIDLVLVSTYTDSTDTNNNSQNLSEKRAE-VLREYF 241
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 242 KSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 281
>gi|126662166|ref|ZP_01733165.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
gi|126625545|gb|EAZ96234.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
Length = 642
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + + + K + ++ ++ K P + I+SHTDS + NL +S +R
Sbjct: 527 FSIQNIYFDLDKSEINDKAEKQIAILLYVMQKNPDIKLEIKSHTDSRASKSYNLELSNKR 586
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
A + + + + IS +G+ ++ ++ Q N+R E +
Sbjct: 587 ALETSN-WLVKNGIDSSRISSKGYGESRLVNHCSDGVKCSEEEHQMNRRSEFIVI 640
>gi|71733309|ref|YP_276024.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257486625|ref|ZP_05640666.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. tabaci ATCC 11528]
gi|289624957|ref|ZP_06457911.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. aesculi str. NCPPB3681]
gi|289650466|ref|ZP_06481809.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. aesculi str. 2250]
gi|71553862|gb|AAZ33073.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|320325629|gb|EFW81691.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. glycinea str. B076]
gi|320327087|gb|EFW83101.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. glycinea str. race 4]
gi|330867247|gb|EGH01956.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330879063|gb|EGH13212.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330889567|gb|EGH22228.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. mori
str. 301020]
gi|330989530|gb|EGH87633.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331010107|gb|EGH90163.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 301
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L + L P+ I + H+D+ G N +S+
Sbjct: 171 VKQAEVGFPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + Y + + I++R +YP+ N + R N+R+ + +
Sbjct: 231 RALAVMDYFKAQ-GIPEQQITLRFHGERYPLVPNTNEANRARNRRVNVHL 279
>gi|328469328|gb|EGF40274.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus 10329]
Length = 340
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L L + + L+ T + I HTD++G NL +S+ RA +
Sbjct: 212 FQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHTDNVGPRLTNLSVSRLRAQQVAD 271
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
LI + I VR +YP+ N+T G+ N+R+ +++ R N +
Sbjct: 272 ALIA-HGVNPNIIEVRSHGDRYPVANNNTAAGQAKNRRVTLRLV-RDNER 319
>gi|319956698|ref|YP_004167961.1| ompa/motb domain protein [Nitratifractor salsuginis DSM 16511]
gi|319419102|gb|ADV46212.1| OmpA/MotB domain protein [Nitratifractor salsuginis DSM 16511]
Length = 173
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 23/169 (13%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
SGC + + + + G + Q + +GI +
Sbjct: 20 SGCA--PKTPAPGTNPGNGGSQYGTEVPGGISSTGKYTGQDGVSASGIKM---------- 67
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST----VIAIQSHTDSIGTLKNNLLISQ 131
+E LQ I + + K I I+ + D +GT + N +
Sbjct: 68 ---VYFSTDRYDVEPD---QLQRIMSDMPKIQKLASSGKIRIEGNCDEMGTDEYNHALGL 121
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+RA ++S L+ + I V + PI T + N+R+EI
Sbjct: 122 KRAKAVQSILVSN-GIPSSRIDVVSYGESNPICTGHSAPCHAKNRRVEI 169
>gi|311696332|gb|ADP99205.1| OmpA/MotB domain protein [marine bacterium HP15]
Length = 146
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
++ L+K + LQ A L + PS + I H+D+ G+ N +S+ RA+ + LI
Sbjct: 42 FNKHSLDKDDIAFLQQHAAYLKEHPSVSVRIHGHSDNFGSEDYNQFLSRLRANAVARSLI 101
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
Q GV +R + +R + P+ T R N+R+E++
Sbjct: 102 QEGVEESRIL-MRHWGSARPLA---TPEDRAANRRVELE 136
>gi|300870376|ref|YP_003785247.1| peptidoglycan-associated lipoprotein [Brachyspira pilosicoli
95/1000]
gi|300688075|gb|ADK30746.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Brachyspira pilosicoli 95/1000]
Length = 194
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 68/191 (35%), Gaps = 12/191 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + + FI+TT+ C + N + + + + ++ +
Sbjct: 1 MKKIILVLSFILTTVVACSSTPKATTPENTSGFNTELNLPDGV-----RVRETPRGKVLE 55
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
++ I + ++ L+ TILN P I ++ ++
Sbjct: 56 LYDPKAKSDVGKQTGIYEVKFQFDKAVEIGEYKQAYNLVYTILNNNPEIRIMVEGNSSKE 115
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE- 179
G N +S R+D +YLI+ G +NR + F P + N+R E
Sbjct: 116 GKAPYNYNLSVRRSDTSYNYLIKLGTKNNRLLK-NAFGEGLPEYPT-----LEANRRTEF 169
Query: 180 IQIFPRGNIKK 190
I I ++KK
Sbjct: 170 IVIMNEADLKK 180
>gi|28901394|ref|NP_801049.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus RIMD 2210633]
gi|153835953|ref|ZP_01988620.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus AQ3810]
gi|260362948|ref|ZP_05775817.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus K5030]
gi|260880235|ref|ZP_05892590.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus AN-5034]
gi|260895352|ref|ZP_05903848.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus Peru-466]
gi|28809941|dbj|BAC62882.1| putative sodium-type flagellar protein MotY precursor [Vibrio
parahaemolyticus RIMD 2210633]
gi|149750707|gb|EDM61452.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus AQ3810]
gi|308085759|gb|EFO35454.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus Peru-466]
gi|308091961|gb|EFO41656.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus AN-5034]
gi|308112265|gb|EFO49805.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus K5030]
Length = 340
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L L + + L+ T + I HTD++G NL +S+ RA +
Sbjct: 212 FQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHTDNVGPRLTNLSVSRLRAQQVAD 271
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
LI + I VR +YP+ N+T G+ N+R+ +++ R N +
Sbjct: 272 ALIA-HGVNPNIIEVRSHGDRYPVANNNTAAGQAKNRRVTLRLV-RDNER 319
>gi|126661868|ref|ZP_01732867.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38]
gi|126625247|gb|EAZ95936.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38]
Length = 274
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 64/174 (36%), Gaps = 10/174 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF---QMQLQDTGIVVSRIGDMIT 73
E +K +H + D+ + + +AE E + + +S++G I
Sbjct: 104 ATSANKAENRKAIIHYLLEKDLEKENEVLGIKEAEPEVIIPEDATLAEKVKLSKVGMKIV 163
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + L + I+ P I IQ H I K+ +S +R
Sbjct: 164 L--KNINFYQNTFATMPESQGTLYDLLFIMQNNPELKIEIQGHICCI--DKDYRNLSTDR 219
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQNNQRIEIQIFPR 185
A IK +L+ + + +GF PI T N+R+EI+I +
Sbjct: 220 AKQIKRFLVYN-GIQDYRVKTKGFGVSQPIHPIPEATPEQAAENRRVEIEILSK 272
>gi|149371838|ref|ZP_01891157.1| outer membrane protein, peptidoglycan-associated lipoprotein
[unidentified eubacterium SCB49]
gi|149354978|gb|EDM43539.1| outer membrane protein, peptidoglycan-associated lipoprotein
[unidentified eubacterium SCB49]
Length = 647
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 5/121 (4%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + + + F+ LQ + + K+P+ I ++SHTDS + N
Sbjct: 526 DDLNDILDLNMIYFDLDKDFIRADAQIELQKVIKYMKKYPNLKIDVRSHTDSRNSHAYNE 585
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQI 182
+S R +Y++ G S ++ RG+ + ++ Q N+R E I
Sbjct: 586 DLSSRRNKNTIAYIVNHGGISAARLTGRGYGETQLTNHCSDGVQCSEALHQLNRRSEFII 645
Query: 183 F 183
Sbjct: 646 V 646
>gi|126461330|ref|YP_001042444.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126102994|gb|ABN75672.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 213
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
P L + L+ A + +FP + HTD +G+ N + RA
Sbjct: 65 PTITFPFDSAALTPEAQATLRRQADWIRQFPEVRFRVYGHTDLVGSEAYNKRLGLRRAKA 124
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ +YL +G+S R ++ + P+ R N+R
Sbjct: 125 VVAYLASQGISPARLEALVSYGETRPVIPVAAPEER--NRR 163
>gi|299069861|emb|CBJ41142.1| putative transmembrane protein, OmpA/MotB motif [Ralstonia
solanacearum CMR15]
Length = 215
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 66/193 (34%), Gaps = 22/193 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE-FQMQLQDTG 62
+ L F++ +S + + + + N+ ++ + + L
Sbjct: 24 SVLLGAFVLILVS----------VIAVQLELSSRLENEVEQRQMEAQRRKTLEQALAGPL 73
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF---PSTVIAIQSH-- 116
I V F + L+ + L +L+ +A L+ + ++ +
Sbjct: 74 AAGRVTLVNGRIGISGSVLFALNSDQLQPEGLELLKSLAGPLSAYLRSRDEILMVSGFAD 133
Query: 117 ----TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+N +S +RA + LI G+ + F + P+ +N GR
Sbjct: 134 DQQVHAGNRRFADNWELSAKRALTVTRTLIDAGIPGASVFAAA-FGSEQPVSSNADDAGR 192
Query: 173 QNNQRIEIQIFPR 185
N+R+EI PR
Sbjct: 193 AKNRRVEIAPVPR 205
>gi|254506121|ref|ZP_05118265.1| outer membrane protein [Vibrio parahaemolyticus 16]
gi|219550939|gb|EED27920.1| outer membrane protein [Vibrio parahaemolyticus 16]
Length = 211
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L ++ + +S ++I + L ++ +L + ++ S+ + + HT
Sbjct: 92 LTNSEVRLSNDPEVIA----RVYFNFDQSTLTQQSEYVLTRVIRMVESN-SSNLELAGHT 146
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D++G N + +R+ ++ YLI +GV R ++ + P N + R+ N+R
Sbjct: 147 DNVGDAGYNFSLGLKRSKSVEDYLIDQGVDPKR-VTTTSYGETKPFVDNMSDENRKLNRR 205
Query: 178 IEI 180
+EI
Sbjct: 206 VEI 208
>gi|149185618|ref|ZP_01863934.1| hypothetical protein ED21_21374 [Erythrobacter sp. SD-21]
gi|148830838|gb|EDL49273.1| hypothetical protein ED21_21374 [Erythrobacter sp. SD-21]
Length = 162
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 59/170 (34%), Gaps = 15/170 (8%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ ++ C + E+ ++ + + F + VV
Sbjct: 1 MLTSALALAACQKKAPEEIPPPPIETPTPAPAPTTPAGPSVGSMEHFMQAVGQANTVV-- 58
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
++ + LQ A +++P+ I+ H D GT + NL
Sbjct: 59 ------------YFDTDRYNIDAEDSAKLQTQAQYFSQYPNVNFTIEGHADERGTREYNL 106
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ + RA+ K+YL+ G+ ++R I + + P+ + N+R
Sbjct: 107 ALGERRANAAKNYLVSLGIPASR-IRTISYGKERPVALGSNEAAWAQNRR 155
>gi|159043661|ref|YP_001532455.1| peptidoglycan-associated lipoprotein [Dinoroseobacter shibae DFL
12]
gi|157911421|gb|ABV92854.1| peptidoglycan-associated lipoprotein [Dinoroseobacter shibae DFL
12]
Length = 175
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 20/178 (11%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
L++ + +SGC A G D + Q +
Sbjct: 13 LALIVALALSGC--AGSGGLFGGGAGGGTAGSGALSSGDFGDPTSPAYFQQAIGDRV--- 67
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ V + L + ++ A L + I+ H D GT + N
Sbjct: 68 -------------LFAVDQSTLSGEAQQVVSQQARWLMDNGAYTAVIEGHADEQGTQEYN 114
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
L + RA ++ +++ +GV+ NR +V F + PI+ + N+R + +
Sbjct: 115 LALGARRASAVRDFMVSQGVADNRLSTVT-FGKERPIEVCSEERCYAQNRRA-VTVLS 170
>gi|148546371|ref|YP_001266473.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148510429|gb|ABQ77289.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 313
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ L+ L +I + P+ + + H+D+ G N +S+
Sbjct: 172 VRQTQVGFPGGGIELDAAAKARLDVILDYMKADPTVNHVELNGHSDNSGNRLTNRDLSRR 231
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + Y I+VR +YP+ N++ R N+R+ I++
Sbjct: 232 RALAVADYFKAN-GVPEEQITVRFHGERYPLAKNNSASNRARNRRVNIEL 280
>gi|262402652|ref|ZP_06079213.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC586]
gi|262351434|gb|EEZ00567.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC586]
Length = 294
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
V L K L IA + ++ + ++TDS T N+ +S++RA+ +
Sbjct: 191 DSVELNKASQKRLAQIAEYVRYNSDIDLVLVSTYTDSTDTNNNSQNLSEKRAE-VLREYF 249
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 250 KSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|187924070|ref|YP_001895712.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
gi|187715264|gb|ACD16488.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 204
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 69/192 (35%), Gaps = 16/192 (8%)
Query: 6 GLSMFIMTTISGCGLASR--------EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+ ++ +++ C + K + +S + + + +D +
Sbjct: 13 AAAFIMLASLAACSTPDKIILLPDPDGKVGAVVVRSATGEQTIDKAYAGVDVTKGGSIEP 72
Query: 58 LQDTGIVVSRIGDMIT-------CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
D+ V + + F S L + +Q + T+L +P+
Sbjct: 73 TVDSQSTVQARYGELLAARPPRPMTFTIFFLFDSATELAPESAATVQKLKTVLATWPAPQ 132
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ + HTD G+ + N +S +RA + ++LI++ + I + P+ V
Sbjct: 133 LVVVGHTDLAGSQEFNDRLSMQRAQTVAAFLIKQ-GIPAQRIETAARGKREPLVPTADGV 191
Query: 171 GRQNNQRIEIQI 182
+ N+R I I
Sbjct: 192 PHRMNRRAVITI 203
>gi|104780417|ref|YP_606915.1| OmpA/MotB family outer membrane protein [Pseudomonas entomophila
L48]
gi|95109404|emb|CAK14104.1| putative outer membrane protein, OmpA/MotB family [Pseudomonas
entomophila L48]
Length = 325
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ + L+ L ++ L PS I + H+D+ G N S+
Sbjct: 172 IRQTQVGFPGAGIELDAAGRARLDVVLDYLKADPSVNHIELDGHSDNSGNRLTNRDTSRR 231
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + ++ I+VR +YP+ N++ R N+R+ IQ+
Sbjct: 232 RALAVAE-YLKAHGVPEDQITVRFHGERYPLAKNNSAANRARNRRVNIQL 280
>gi|258622021|ref|ZP_05717050.1| sodium-type flagellar protein MotY [Vibrio mimicus VM573]
gi|258627110|ref|ZP_05721906.1| sodium-type flagellar protein MotY [Vibrio mimicus VM603]
gi|262165241|ref|ZP_06032978.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus VM223]
gi|258580628|gb|EEW05581.1| sodium-type flagellar protein MotY [Vibrio mimicus VM603]
gi|258585774|gb|EEW10494.1| sodium-type flagellar protein MotY [Vibrio mimicus VM573]
gi|262024957|gb|EEY43625.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus VM223]
Length = 294
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
V L K L IA + ++ + ++TDS T N+ +S++RA+ +
Sbjct: 191 DSVELNKASQKRLAQIAEYVRYNSDIDLVLVSTYTDSTDTNNNSQNLSEKRAE-VLREYF 249
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 250 KSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|152985175|ref|YP_001347005.1| outer membrane protein [Pseudomonas aeruginosa PA7]
gi|150960333|gb|ABR82358.1| probable outer membrane protein [Pseudomonas aeruginosa PA7]
Length = 321
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L L +I +L PS I + H+D+ G N +S+
Sbjct: 171 VKLAQVGFPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA + ++ I+VR + +YP+ N++ R N+R+ + + ++
Sbjct: 231 RALAV-QEYLKGNGVPESQINVRFYGERYPLVANNSAANRARNRRVTVHLAREAVVE 286
>gi|29423528|gb|AAO73590.1| lateral flagellar MotY-like protein [Vibrio parahaemolyticus]
Length = 340
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L L + + L+ T + I HTD++G NL +S+ RA +
Sbjct: 212 FQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHTDNVGPRLTNLSVSRLRAQQVAD 271
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
LI + I VR +YP+ N+T G+ N+R+ +++ R N +
Sbjct: 272 ALIA-HGVNPNIIEVRSHGDRYPVANNNTAAGQAKNRRVTLRLV-RDNER 319
>gi|220935429|ref|YP_002514328.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219996739|gb|ACL73341.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 427
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 14/159 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + L D + +GD + + + L
Sbjct: 269 AEEVRELSRYRSEFFGRLREVLSDVE-DIQIVGDRFRFQ-SELFFETASADIGPEGRERL 326
Query: 97 QLIATILNKFP-------STVIAIQSHTDSIGTLKNN----LLISQERADVIKSYLIQRG 145
+A + + V+ ++ HTD +S RA I +YLI R
Sbjct: 327 DRVARTIREIDARIPGDIGWVLMVEGHTDRRPIRTEQFPSNWELSSARAQSIVNYLISR- 385
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ R ++ GF +P+D T+ N+RIE+++
Sbjct: 386 GVAPRRLAAAGFGEYHPLDAGSTEAAFSRNRRIEMRLSS 424
>gi|94971347|ref|YP_593395.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
versatilis Ellin345]
gi|94553397|gb|ABF43321.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
versatilis Ellin345]
Length = 605
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 3/104 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L + L I I +TD +G+ N +S++RA +K Y
Sbjct: 496 FASGSDQPLPTSIAALNRLKDELAINSQLAIQIDGYTDDVGSDILNQPLSEKRALAVKRY 555
Query: 141 LIQ---RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
Q RF SV G + P+ N T G+ N+R+EI
Sbjct: 556 FQQTAPLSFPEMRFKSVAGHGSQNPLADNGTLQGKALNRRVEIT 599
>gi|89889605|ref|ZP_01201116.1| insulin-like peptidase, M16 family [Flavobacteria bacterium BBFL7]
gi|89517878|gb|EAS20534.1| insulin-like peptidase, M16 family [Flavobacteria bacterium BBFL7]
Length = 573
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + + L I ++ K S I +++TD+ G+ N +SQ+R
Sbjct: 459 LQINRIYFDNDKAAITTSAAKELDRIVAMMMKNSSMEILAETYTDTRGSDSYNKTLSQKR 518
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND----TKVGRQNNQRIEIQIFPR 185
AD ++ YLI + + + G P+ + T + ++R E I +
Sbjct: 519 ADAVRGYLISK-GIAANRVKAVGRGEDNPVVDCESKTCTDEEYEQSRRTEFTITKK 573
>gi|323496851|ref|ZP_08101888.1| sodium-type flagellar protein MotY [Vibrio sinaloensis DSM 21326]
gi|323318110|gb|EGA71084.1| sodium-type flagellar protein MotY [Vibrio sinaloensis DSM 21326]
Length = 293
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 50/149 (33%), Gaps = 7/149 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRI--GDMITCYIPVHVS-----FVSEVFLEKKFL 93
+ + S ++ E L + V +++ + V L K+
Sbjct: 140 QEWQSRDERVEVALSSVLFQSSYNVFSDCIANLLPYSFEDIAFTILHYDRTSVELNKQSQ 199
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L IA + + + S K+ ER + + I
Sbjct: 200 KRLAQIAEYIRHNQDIDLVLVSTYTDAEDTKSASQNLSERRAEVLQEYFKSLGLPEDRIR 259
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V+G+ + PID N + +G+ N+R+ I +
Sbjct: 260 VQGYGKRRPIDDNASPIGKDRNRRVVISL 288
>gi|27381973|ref|NP_773502.1| flagellar motor protein MotB [Bradyrhizobium japonicum USDA 110]
gi|27355143|dbj|BAC52127.1| motB [Bradyrhizobium japonicum USDA 110]
Length = 445
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 60/172 (34%), Gaps = 15/172 (8%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH- 79
E + + + +L + V ++ + + +
Sbjct: 280 KDSEPRDAAQTQQPTVKQLQSAIAEALSDIKAG-----AGPAAEVRQVEEGLLVSLTDDT 334
Query: 80 ---VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQER 133
+ V + + ++ I +L K I ++ HTD+ +N +S R
Sbjct: 335 SFGMFAVGSAEPRPELIRVIDKIGPLLMKRQGM-IIVRGHTDNRPYKSETYDNWRLSTAR 393
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
A + L++ GV + R V G+A + P ND N+RIEI I +
Sbjct: 394 AQMAYYMLVRSGVDAQRIEHVEGYADRRPKLQNDPAA--AQNRRIEILIREK 443
>gi|320355393|ref|YP_004196732.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320123895|gb|ADW19441.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
Length = 201
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 55/193 (28%), Gaps = 16/193 (8%)
Query: 5 LGLSMFIMTTISG-CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA------------- 50
L ++ ++G CG +D + R G+ ++
Sbjct: 9 LATALACTVLLAGGCGPKQVSPYAGGAGAGSDDSMGGNRMGNITEETGPGVEGLDSTGRG 68
Query: 51 -EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
R + + +P ++ L S
Sbjct: 69 GSGSLATDADQQSDAYKRAHGRSSPEFTPIYFDYDHSGIRSDQIPSMEHNGGYLKSNSSA 128
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ I+ +TD+ GT + NL + + RA + I + + P+ ++
Sbjct: 129 RVLIEGNTDNRGTNEYNLALGERRAMSA-KTYLIEFGIEESRIRTVSYGEERPLFNGGSE 187
Query: 170 VGRQNNQRIEIQI 182
+N+R + +
Sbjct: 188 DDYAHNRRDDFIL 200
>gi|237747593|ref|ZP_04578073.1| outer membrane protein A [Oxalobacter formigenes OXCC13]
gi|229378955|gb|EEO29046.1| outer membrane protein A [Oxalobacter formigenes OXCC13]
Length = 207
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 72/211 (34%), Gaps = 39/211 (18%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF------ 54
M K L + AS ++ + K + L D
Sbjct: 1 MNKLLKVIF----------AASAVVAASASAQTMTEYMAKKPYSGYLQTQRDTIVRSGTG 50
Query: 55 ----------------------QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
Q V Y + ++ +
Sbjct: 51 LCWHTGYWTPADAVPGCDGPLTQPAAAAPVAVAPVPTAEKVTYAADAFFDFDKSIVKPEG 110
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L + L+ + VI HTD IGT K N +S+ RA+ +K+YL+ +GV +N+
Sbjct: 111 KAKLDELIKALSGMDTEVIVAVGHTDWIGTDKYNQKLSERRANAVKAYLVSKGVPANKIF 170
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ G K PI +N T+ GR N+R+E+++
Sbjct: 171 T-EGKGKKQPIASNKTREGRAKNRRVEVEVV 200
>gi|119477236|ref|ZP_01617472.1| peptidoglycan-associated lipoprotein OprL [marine gamma
proteobacterium HTCC2143]
gi|119449599|gb|EAW30837.1| peptidoglycan-associated lipoprotein OprL [marine gamma
proteobacterium HTCC2143]
Length = 175
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 66/182 (36%), Gaps = 11/182 (6%)
Query: 2 IKELGL--SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K L ++ + GC + + + + A E +
Sbjct: 3 MKRTQLLGAILASVLLVGCASNDTVEDTSDADRIAAEQAADAEAAARSAAAAAEAEAVRV 62
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + + + L L +LN+ + + ++ H D
Sbjct: 63 AAEEAAANLQ-------TIFYFDFDQATLSADTREALDSQIAVLNENSN-KVRLEGHADE 114
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N+ +++ RA+ I +Y+I GV+ R +V + + P+ ++ N+R+E
Sbjct: 115 RGTREYNMALAERRANAIANYMIINGVARYRVETVS-YGEERPVSAGSSESSYSENRRVE 173
Query: 180 IQ 181
++
Sbjct: 174 LK 175
>gi|37704612|gb|AAR01578.1| OprF [Pseudomonas sp. MFY59]
gi|37704620|gb|AAR01582.1| OprF [Pseudomonas sp. MFY68]
gi|37704662|gb|AAR01603.1| OprF [Pseudomonas sp. MFY161]
Length = 318
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 10/152 (6%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G + +D N ++DK D + V G +
Sbjct: 173 GGSGGQKAAPAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEV 226
Query: 77 P----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ ++ +A + ++P T ++ HTDS+G N +S+
Sbjct: 227 VRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTTVEGHTDSVGPDAYNQKLSER 286
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
RA+ +K L Q+ + + G+ P+
Sbjct: 287 RANAVKQVLTQQYGIESSRVDSVGYGETRPVA 318
>gi|77462452|ref|YP_351956.1| OmpA/MotB family outer membrane protein [Rhodobacter sphaeroides
2.4.1]
gi|221638315|ref|YP_002524577.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
gi|332560336|ref|ZP_08414658.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
gi|77386870|gb|ABA78055.1| outer membrane protein, OmpA/MotB family [Rhodobacter sphaeroides
2.4.1]
gi|221159096|gb|ACM00076.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
gi|332278048|gb|EGJ23363.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
Length = 213
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
P L + L+ A + +FP + HTD +G+ N + RA
Sbjct: 65 PTITFPFDSAALTPEAQATLRRQADWIRQFPEVRFRVYGHTDLVGSEAYNKRLGLRRAKA 124
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ +YL +G+S R ++ + P+ R N+R
Sbjct: 125 VVAYLASQGISPARLEALVSYGETRPVIPVAAPEER--NRR 163
>gi|71909306|ref|YP_286893.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71848927|gb|AAZ48423.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 188
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
D+ I + +G ++ ++ + P L+ A L + P+ + ++ + D
Sbjct: 65 ADSAIKIDPVGLR---TQRSVYFDLNSADIKADYDPALRAHARYLAEHPNARVRVEGNAD 121
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ ++N + +RA+ ++S ++ ++ + I+++ P + N+R
Sbjct: 122 ERGSSEHNRRLGLKRAENVRSAMLSN-GAAEKQIAIKTLGEARPKLVGHDEASWSENRRA 180
Query: 179 EIQ 181
++
Sbjct: 181 DVI 183
>gi|149909537|ref|ZP_01898191.1| outer membrane protein [Moritella sp. PE36]
gi|149807442|gb|EDM67393.1| outer membrane protein [Moritella sp. PE36]
Length = 211
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I L K +L I +L + ++ ++ H D+ GT N + +R+
Sbjct: 108 IARVYFDFDNAHLTDKSKYVLDTIMQLLKLNNNNLV-VEGHADTTGTADYNFSLGLKRSR 166
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++ + PI NDT+ GRQ N+R+EI+
Sbjct: 167 SVAQ-YLKQLGVEKGRLEATSVGDTMPISDNDTEAGRQLNRRVEIK 211
>gi|85714376|ref|ZP_01045364.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
gi|85698823|gb|EAQ36692.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
Length = 154
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 1/111 (0%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
D + + L + + L+ A L + I+ H D GT + N
Sbjct: 36 SQQDFVVNVGDRVFFESDQTSLSPQAITTLEKQARWLQTYNRYSFTIEGHADERGTREYN 95
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ + RA ++S+L RG+ R ++ + + P+ + N+R
Sbjct: 96 IALGARRAQTVRSFLASRGIDPGRMRTIS-YGKERPVAVCNDISCWSQNRR 145
>gi|332702326|ref|ZP_08422414.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332552475|gb|EGJ49519.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 243
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
D + L + + + + + + + F + E L+ LP+L+ IA +L F
Sbjct: 99 DIMPSQVDRALLEENLQILARDEGVALVLSDKLLFAMGEAKLKDSALPILERIAYVL-AF 157
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ + + H+D +G + + +Q NR +SV F P+
Sbjct: 158 MTAPVNVAGHSDMVGGRSDGNYAISANRAMEVLQFLQEYGLDNRRLSVSAFGPDQPLLEG 217
Query: 167 DTKVGRQNNQRIEIQI 182
+ N+R+EI +
Sbjct: 218 NGPAVWNKNRRVEILV 233
>gi|46906937|ref|YP_013326.1| chemotaxis protein MotB [Listeria monocytogenes serotype 4b str.
F2365]
gi|226223317|ref|YP_002757424.1| motility protein (flagellar motor rotation) MotB [Listeria
monocytogenes Clip81459]
gi|254993370|ref|ZP_05275560.1| motility protein (flagellar motor rotation) MotB [Listeria
monocytogenes FSL J2-064]
gi|255522318|ref|ZP_05389555.1| motility protein (flagellar motor rotation) MotB [Listeria
monocytogenes FSL J1-175]
gi|46880203|gb|AAT03503.1| chemotaxis protein MotB [Listeria monocytogenes serotype 4b str.
F2365]
gi|225875779|emb|CAS04482.1| Putative motility protein (flagellar motor rotation) MotB [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|328467255|gb|EGF38335.1| chemotaxis protein MotB [Listeria monocytogenes 1816]
gi|328475649|gb|EGF46398.1| chemotaxis protein MotB [Listeria monocytogenes 220]
Length = 275
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 57/171 (33%), Gaps = 7/171 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A+ ++K + ++ + + + + + + + I +
Sbjct: 95 ATEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDDI 154
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE------R 133
F L + + I + + T+ I S + ++ S
Sbjct: 155 LFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARA 214
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +++ + + + S RG+ P+ ND R+ N+R+EI + P
Sbjct: 215 VNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRP 265
>gi|330819528|ref|YP_004348390.1| type IV / VI secretion system protein, DotU family [Burkholderia
gladioli BSR3]
gi|327371523|gb|AEA62878.1| type IV / VI secretion system protein, DotU family [Burkholderia
gladioli BSR3]
Length = 469
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 60/198 (30%), Gaps = 17/198 (8%)
Query: 5 LGLSMFIMTTIS----------GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
+ ++ + ++ G + ++ N + +
Sbjct: 273 VAMAAAAVILLASFLYFFTRLNGLVEPVSAQLAAIGLQNVPPPQANAAPKPAGKSLKSLL 332
Query: 55 QMQLQDTGIVVSRIGD-MITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
Q + V D T + + F + +P+L+ +A LN+ VI
Sbjct: 333 APLEQAGALAVDEQPDGRATVRLAAGLLFPSGGADIAPAEIPLLRQVAAALNQVKGRVIV 392
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSY---LIQRGVSSNRFISVRGFAYKYPIDTNDT- 168
+ HTD + + ++ +G+ R + G PI T +
Sbjct: 393 V-GHTDDQPIRSLKFKDNFALSTARAQNTLAILAQGLDDPRRLEANGAGSSQPIATPPSL 451
Query: 169 KVGRQNNQRIEIQIFPRG 186
R N+R+EI P
Sbjct: 452 PENRARNRRVEILYIPEN 469
>gi|294146707|ref|YP_003559373.1| OmpA-family protein [Sphingobium japonicum UT26S]
gi|292677124|dbj|BAI98641.1| OmpA-family protein [Sphingobium japonicum UT26S]
Length = 288
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 2/120 (1%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ L + L A + ++ + +TDS G + N
Sbjct: 165 DQYNVKSTTNVNFDTGKAVLSAQAKNDLCATAATAEGMSNALLLVVGYTDSTGDDEFNQE 224
Query: 129 ISQERADVIKSYLIQRGVSSN-RFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFPRG 186
+S++RA + +YL Q R ++ G A P+ +NDT G+ N+R+ + + +G
Sbjct: 225 LSEKRAGRVVNYLQQACGWKPYRMLTPTGMAEADPVASNDTIEGKAQNRRVAVNILVSKG 284
>gi|47091738|ref|ZP_00229534.1| chemotaxis protein MotB [Listeria monocytogenes str. 4b H7858]
gi|47020057|gb|EAL10794.1| chemotaxis protein MotB [Listeria monocytogenes str. 4b H7858]
Length = 293
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 57/171 (33%), Gaps = 7/171 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A+ ++K + ++ + + + + + + + I +
Sbjct: 113 ATEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDDI 172
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE------R 133
F L + + I + + T+ I S + ++ S
Sbjct: 173 LFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARA 232
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +++ + + + S RG+ P+ ND R+ N+R+EI + P
Sbjct: 233 VNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRP 283
>gi|269963500|ref|ZP_06177826.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831797|gb|EEZ85930.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 91
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+N +P + I ++D+ G+ N ++++RA + + G++++R +V+G P
Sbjct: 1 MNTYPQAQVEINGYSDTTGSEAYNQQLTEKRAQAVADHFQAEGIAADRM-TVKGMGEANP 59
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
+ +N+T+ GR+ N+R+E+ +
Sbjct: 60 VASNETREGREENRRVEVVV 79
>gi|46578465|ref|YP_009273.1| chemotaxis protein MotB [Desulfovibrio vulgaris str. Hildenborough]
gi|120603951|ref|YP_968351.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|46447876|gb|AAS94532.1| chemotaxis protein MotB [Desulfovibrio vulgaris str. Hildenborough]
gi|120564180|gb|ABM29924.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
gi|311232393|gb|ADP85247.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
Length = 246
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 55/134 (41%), Gaps = 3/134 (2%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPS 108
+ + + + V + + + + F + L L +L + +L
Sbjct: 105 LPPGVEARTVERDVEVLENPEGVVIALTHDLLFPQGQDRLPPASLRLLDTLTDVLAGL-D 163
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ + +HTD+ + +S RA + + +QRG+ R SV G+ P+D + +
Sbjct: 164 ADVNVSAHTDATEGGADPWDLSDRRALSVLEHFLQRGMDPAR-FSVSGYGPDRPLDASAS 222
Query: 169 KVGRQNNQRIEIQI 182
Q N+R+EI +
Sbjct: 223 PEAAQRNRRVEILV 236
>gi|88811406|ref|ZP_01126661.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
gi|88791295|gb|EAR22407.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
Length = 439
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 55/156 (35%), Gaps = 14/156 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
K + + L + +GD + L +A
Sbjct: 287 KELSYYRSEFFGRLRQVL-GDVPEIRVVGDRFMFQ-SELFFPSGSAQIAAPGKDKLDRLA 344
Query: 101 TILNKFP-------STVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSN 149
T+L + V+ + HTD N +S RA I YL+ RGV N
Sbjct: 345 TVLEEVSRRIPGDVDWVLQVDGHTDRRPIHTPRFPSNWELSTARALSIVHYLVTRGVPPN 404
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
R ++ G+ PID+ D+ N+RIE+++ R
Sbjct: 405 R-LAAAGYGQYDPIDSRDSPQALARNRRIELRLTSR 439
>gi|320577122|gb|ADW54070.1| outer membrane protein A [Sodalis glossinidius]
Length = 358
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + L + + L+ + + +TD IGT + N +SQERA
Sbjct: 231 SDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRIGTEQYNQKLSQERA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ SYL+ + + IS RG P+ N ++ GR ++R+EI++
Sbjct: 291 QSVVSYLVSK-GIPSDKISARGMGKSNPVTGNTCNSVKGRAAVISCLAPDRRVEIEV 346
>gi|157374990|ref|YP_001473590.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157317364|gb|ABV36462.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
Length = 297
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V L + + I L P + I ++TDS G N +S+E
Sbjct: 185 IAFTVLTYEFGGAELTRYAKAQIAKIQEYLAYDPEVELVLIDAYTDSYGGRSINQKVSEE 244
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD +K++ + G++ R +V G ++ + +NDT R N+R+ I+I
Sbjct: 245 RADSVKNFFLSAGITQERIHTV-GHGERHHVASNDTIDERSRNRRVVIRI 293
>gi|78484731|ref|YP_390656.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78363017|gb|ABB40982.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
Length = 248
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/209 (13%), Positives = 65/209 (31%), Gaps = 28/209 (13%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL-----------DKAEDE 53
+ F++ ++ + +K+K F+ + + + +
Sbjct: 27 TLMVFFLVMWLT--SIVDPDKRKAFVEALVGEGAGGENISADETNTPREPSIMKEDLKPV 84
Query: 54 FQMQLQDT-------GIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNK 105
++Q I + D + F + K L+ + L
Sbjct: 85 STEEIQQAMSKVNPKDIDIEDTPDYTKITLRSDSFFESGRATITDKTREQLEQLGETLAG 144
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ----RGVSSNRFISVRGFAYKY 161
I+I +TDSI +N S ++ + +++ G A
Sbjct: 145 R-DQEISITGYTDSIPI-ENLQFPSNWELSAARAATVARTFIYMGVDKNLVTISGKADND 202
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ N T GR N+R+ I + + + K+
Sbjct: 203 AVAPNATAYGRSLNRRV-IILVNKKSQKQ 230
>gi|85059008|ref|YP_454710.1| outer membrane protein A [Sodalis glossinidius str. 'morsitans']
gi|84779528|dbj|BAE74305.1| outer membrane protein A precursor [Sodalis glossinidius str.
'morsitans']
Length = 356
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + L + + L+ + + +TD IGT + N +SQERA
Sbjct: 229 SDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRIGTEQYNQKLSQERA 288
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ SYL+ + + IS RG P+ N ++ GR ++R+EI++
Sbjct: 289 QSVVSYLVSK-GIPSDKISARGMGKSNPVTGNTCNSVKGRAAVISCLAPDRRVEIEV 344
>gi|89069601|ref|ZP_01156940.1| OmpA family protein [Oceanicola granulosus HTCC2516]
gi|89044799|gb|EAR50899.1| OmpA family protein [Oceanicola granulosus HTCC2516]
Length = 176
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 53/179 (29%), Gaps = 9/179 (5%)
Query: 5 LGLSMFIMTTISGCG--LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
L F + G + ++++ + + D AE G
Sbjct: 2 TALGAFASAIVVGISLTGTPADAQEIYRPGIWIDPDGCEHWAMD-DGAEGYMSPHRTRDG 60
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V ++ + + Q +A + + I HTD +
Sbjct: 61 RPVCHRSEICGVMPNEQLFATDSYRISHANK---QRLAQFFQQANAFGYLIYGHTDERAS 117
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N+ +S+ RA R + V+GF+ P Q N+R+EI
Sbjct: 118 YEYNVRLSENRARA---VAEVAASVGARIVDVKGFSESQPRAEGSNPAAWQQNRRVEIY 173
>gi|303256189|ref|ZP_07342205.1| peptidoglycan-associated outer-membrane lipoprotein
[Burkholderiales bacterium 1_1_47]
gi|331001245|ref|ZP_08324871.1| peptidoglycan-associated lipoprotein [Parasutterella
excrementihominis YIT 11859]
gi|302860918|gb|EFL83993.1| peptidoglycan-associated outer-membrane lipoprotein
[Burkholderiales bacterium 1_1_47]
gi|329568972|gb|EGG50768.1| peptidoglycan-associated lipoprotein [Parasutterella
excrementihominis YIT 11859]
Length = 163
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 48/163 (29%), Gaps = 27/163 (16%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C +K K + E+ +
Sbjct: 22 CSTVDLDKDKAGSITDGTS-------------VEEALSSKTG-------------PLANR 55
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ +P++ A L + + ++ +TD G + NL + Q+RA+ +
Sbjct: 56 EVHFDFDSYTVSPDQMPVVTNHAQFLAAHKNLNVRLEGNTDERGGREYNLALGQKRAEAV 115
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
K + S + I + + P + N+R++I
Sbjct: 116 KERMTLL-GVSPQQIETISYGKEKPKAEGHDEAAYYENRRVDI 157
>gi|296162992|ref|ZP_06845769.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295886786|gb|EFG66627.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 248
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
L L ++ + + +TD+ G+ +NL +SQ
Sbjct: 137 LLLQGNANFATDSAMLSPIAKKNLDHFMSVNQGINLHRLTVVGYTDATGSEAHNLNLSQA 196
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA + YL G+ ++F+ RG P+ +N T GR N+R+++++F
Sbjct: 197 RAAAVVQYLRDGGLHVDQFV-ARGLGSADPVASNATAEGRMQNRRVDVRVFAE 248
>gi|294636572|ref|ZP_06714935.1| OmpA family protein [Edwardsiella tarda ATCC 23685]
gi|291090190|gb|EFE22751.1| OmpA family protein [Edwardsiella tarda ATCC 23685]
Length = 162
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Query: 69 GDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
D + + V F + L + + I L+K + +TD+ GT N
Sbjct: 46 NDGWSFGMSEKVLFGNNQFVLRPESQAHVAEIGRALSKVAILHARLDGYTDNYGTDAYNQ 105
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S +RAD + L G+ ++ RG + PI N T+ GR N+R+ I I
Sbjct: 106 QLSLKRADKVADALASGGMPRAN-LTTRGMGKRDPIADNATRQGRAENRRVAIII 159
>gi|145589655|ref|YP_001156252.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145048061|gb|ABP34688.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 163
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 61/185 (32%), Gaps = 28/185 (15%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K ++ ++ +S C + + + +
Sbjct: 1 MFKFVKVLPLAILVLFMSACSSVKLDDTNGVASVNGGSSMTYDPI--------------- 45
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV--IAIQSH 116
++ K+ + A+ L F I IQ +
Sbjct: 46 --------SDPRSSVYNKRSIYFDFDSYTIDPKYASTVSAHASYLKSFQKQKASIIIQGN 97
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD GT + NL + Q+R++ +K L+ +GVS ++ SV F + P + T Q N+
Sbjct: 98 TDDRGTAEYNLALGQKRSEAVKKALLVQGVSESQLESVS-FGKEKPANPAQTDAAFQENR 156
Query: 177 RIEIQ 181
R +
Sbjct: 157 RADFV 161
>gi|59711130|ref|YP_203906.1| outer membrane protein [Vibrio fischeri ES114]
gi|59479231|gb|AAW85018.1| outer membrane protein [Vibrio fischeri ES114]
Length = 219
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 80/214 (37%), Gaps = 36/214 (16%)
Query: 2 IKEL--GLSMFIMTTISG---------------CGLASREKKKVFLHKSN------DTDI 38
+K++ L++F +S CG S E ++
Sbjct: 1 MKKICVLLALFSANVLSAEKNNNQEFNQLLDYYCGTESVEFQEQVTIGEGKQILFHQGPF 60
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIV----------VSRIGDMITCYIPVHVSFV-SEVF 87
+ S D + F +Q + + D + + V F +
Sbjct: 61 MQVNTELSPDVIKRTFSNAMQQANLSSQCSEYLLSYAEVVEDNVEQKLFARVLFNFDQYS 120
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L ++ +LQ + L T + + HTD+ G N+ + R++ +K++L+ + +
Sbjct: 121 LTERSKYILQSVTEKLETQKDT-VLLNGHTDNKGRENYNINLGLARSNSVKAFLLAQ-GA 178
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S + F + PID N T G+ +N+R++I+
Sbjct: 179 SKEQLESYSFGEQQPIDDNTTLEGQHHNRRVDIE 212
>gi|85709689|ref|ZP_01040754.1| Photosystem I P700 chlorophyll A apoprotein A2 [Erythrobacter sp.
NAP1]
gi|85688399|gb|EAQ28403.1| Photosystem I P700 chlorophyll A apoprotein A2 [Erythrobacter sp.
NAP1]
Length = 198
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 70/184 (38%), Gaps = 15/184 (8%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+++F + +S C + + + ++ + + + + + + +
Sbjct: 9 MIALFGLGALSACQANNDNEDAGETQTAPESPLEGAQPTAPVS----ILRADIDGPPLP- 63
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
++ + L+ L L+ IA I + +H+DS G+
Sbjct: 64 ---AAPVSSFELTVGFPDGGAELDDDALAALEQIANSEQIALGGPIVLGAHSDSDGSDSA 120
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND------TKVGRQNNQRIE 179
N ++ R + +LI+RGV +R I V F + P + N + GR N+R+E
Sbjct: 121 NERAAEARGLAVAGWLIERGVDEDR-IDVIVFGEQNPAEPNALPDGSPNEEGRALNRRVE 179
Query: 180 IQIF 183
+ +
Sbjct: 180 VLVV 183
>gi|153826170|ref|ZP_01978837.1| outer membrane protein, putative [Vibrio cholerae MZO-2]
gi|149740111|gb|EDM54276.1| outer membrane protein, putative [Vibrio cholerae MZO-2]
Length = 212
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 80/204 (39%), Gaps = 19/204 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK L +F+ T + A + + H+ ++ D + + +D+ + + +
Sbjct: 3 IKSWALPLFLCTVTT---SALANQGQYTKHEGDEYDYRPTPLANQIADLQDDDRDGVINA 59
Query: 62 ---------GIVVSRIGDMITCYIPV-----HVSFVSEVFLEKKFLPMLQLIATILNKFP 107
G + G + +E FL ++ +A L +P
Sbjct: 60 RDLCPDTPKGSEIDNDGCGTFVKASQMQQLHILFANDSSSIEPAFLTQIRQMAEFLQTYP 119
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
ST I +Q + +G+ ++NL +S++R++ ++ L+ R + +++ G+
Sbjct: 120 STSIELQGYASKVGSAEHNLALSKQRSEAVRDQLL-RYGVAPERVNIVGYGDSVLEVEGT 178
Query: 168 TKVGRQNNQRIEIQIFP-RGNIKK 190
V N+R+ + +G + K
Sbjct: 179 DDVSHARNRRVTATVVGYKGEVVK 202
>gi|167035318|ref|YP_001670549.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166861806|gb|ABZ00214.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 308
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
L+ L +I + P+ I + H+D+ G N +S+
Sbjct: 172 VRQTQVGFPGGGTELDASARARLDVILDYMKADPTVNHIELDGHSDNSGNRLTNRDLSRR 231
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + Y + + I VR +YP+ N++ R N+R+ I++
Sbjct: 232 RALAVADYF-KAHGVAEEQIIVRFHGEQYPLVKNNSAANRARNRRVNIEL 280
>gi|312881847|ref|ZP_07741618.1| sodium type flagellar protein MotY precursor [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309370493|gb|EFP97974.1| sodium type flagellar protein MotY precursor [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 293
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 39/109 (35%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ S V L K+ L IA + + + + S K+ E+
Sbjct: 180 IAFTILHYDRSSVELNKQSQKRLAKIAEYIKQTKDIDLVLVSTYTDNEDSKSASQGLSEQ 239
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I V+G+ + PID N + +G+ N+R+ I +
Sbjct: 240 RAKALQRYFKSLGLPEDRIQVQGYGKRRPIDDNASPIGKDRNRRVVISL 288
>gi|218515615|ref|ZP_03512455.1| hypothetical conserved membrane protein [Rhizobium etli 8C-3]
Length = 246
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 60/166 (36%), Gaps = 3/166 (1%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
G AS + +T V+ G+ + T ++ D
Sbjct: 81 VGSTQASSIPEASANPAKQETVGVSPTPGNGPAETSPTTAAATITTPQTYWKLPDDDQVN 140
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
V +F + K PMLQ + +++ + +I I HTD+ G + N +S RA
Sbjct: 141 YRVQFAF-DSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDASGGARYNQNLSMLRAR 199
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + + G ++P+D K N+R+E Q
Sbjct: 200 EVARFFTEDCHIPPERLEAVGVGEQFPLDPQKPKAD--ENRRVEFQ 243
>gi|258611826|ref|ZP_05242458.2| chemotaxis protein MotB [Listeria monocytogenes FSL R2-503]
gi|293596186|ref|ZP_05229035.2| chemotaxis protein MotB [Listeria monocytogenes FSL J1-194]
gi|293596895|ref|ZP_05265393.2| chemotaxis protein MotB [Listeria monocytogenes HPB2262]
gi|300764498|ref|ZP_07074491.1| chemotaxis protein MotB [Listeria monocytogenes FSL N1-017]
gi|258606459|gb|EEW19067.1| chemotaxis protein MotB [Listeria monocytogenes FSL R2-503]
gi|293583586|gb|EFF95618.1| chemotaxis protein MotB [Listeria monocytogenes HPB2262]
gi|293593262|gb|EFG01023.1| chemotaxis protein MotB [Listeria monocytogenes FSL J1-194]
gi|300514852|gb|EFK41906.1| chemotaxis protein MotB [Listeria monocytogenes FSL N1-017]
gi|332311111|gb|EGJ24206.1| Chemotaxis protein MotB [Listeria monocytogenes str. Scott A]
Length = 289
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 57/171 (33%), Gaps = 7/171 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A+ ++K + ++ + + + + + + + I +
Sbjct: 109 ATEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDDI 168
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE------R 133
F L + + I + + T+ I S + ++ S
Sbjct: 169 LFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARA 228
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +++ + + + S RG+ P+ ND R+ N+R+EI + P
Sbjct: 229 VNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRP 279
>gi|284989545|ref|YP_003408099.1| OmpA/MotB domain-containing protein [Geodermatophilus obscurus DSM
43160]
gi|284062790|gb|ADB73728.1| OmpA/MotB domain protein [Geodermatophilus obscurus DSM 43160]
Length = 313
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 54/162 (33%), Gaps = 13/162 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDT------GIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ L + ++ + L + G ++ + + L
Sbjct: 123 AAEARAEYEDLSEVREQIEAALAAAGHAGAARFEIDERGLVVHIVADQVLFDAEQAVLRP 182
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRG 145
+ +L IA L P+ + ++ H + G +N +S RA + YL G
Sbjct: 183 EGRQILDAIAPTLRGLPN-SLGVEGHANHLPVTPGGIWPSNWELSAYRATTVVRYLTTGG 241
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
V R + G++ P+ N+R+++ + +
Sbjct: 242 VPGARMV-ANGYSDTRPLVPPTDPNSISVNRRVDVVVLSDAS 282
>gi|190895030|ref|YP_001985323.1| putative outer membrane lipoprotein [Rhizobium etli CIAT 652]
gi|190700691|gb|ACE94773.1| probable outer membrane lipoprotein [Rhizobium etli CIAT 652]
gi|327194360|gb|EGE61220.1| putative outer membrane lipoprotein [Rhizobium etli CNPAF512]
Length = 178
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 2/168 (1%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-TGIVVSRIGD 70
M+ I+G + + T + + + + D
Sbjct: 1 MSAITGYTSRLLAAAMLLALAACSTTEIAALEEPTAAPMTGQTNDPAPGFENVAAGSEED 60
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I L+ + L A LN+ P+ ++ +Q D G+ +S
Sbjct: 61 FILNVGRRIYFKQDSATLDSVAMATLDNQAAWLNRNPTWLLKLQGFADDSGSPSKMQTLS 120
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
Q+RAD +YL +GV R +G+ + + + N+R+
Sbjct: 121 QKRADAAMAYLASKGVDPKRMW-AKGYGNDREVRDCTDRSCKVQNRRV 167
>gi|209886430|ref|YP_002290287.1| flagellar motor protein [Oligotropha carboxidovorans OM5]
gi|209874626|gb|ACI94422.1| flagellar motor protein [Oligotropha carboxidovorans OM5]
Length = 337
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 60/160 (37%), Gaps = 14/160 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + + + +GD L + L
Sbjct: 181 AQRVQELSRYRSEFFGRLR-AILGDRPDIRIVGDRFVFQ-SEVFFDSGSSGLLPEGRGEL 238
Query: 97 QLIATIL----NKFPS---TVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRG 145
+AT + K P+ V+ + HTD + K+N +S RA + YLI RG
Sbjct: 239 DQLATAITELEKKIPAEIPWVLRVDGHTDVRPINSPQFKSNWDLSAARAISVVQYLISRG 298
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
VS R ++ GF P+DT T + N+RIE+++ R
Sbjct: 299 VSPQRLVAA-GFGEFQPLDTATTDDAYKRNRRIELKLTER 337
>gi|90417117|ref|ZP_01225045.1| outer membrane protein OprL precursor [marine gamma proteobacterium
HTCC2207]
gi|90331133|gb|EAS46389.1| outer membrane protein OprL precursor [marine gamma proteobacterium
HTCC2207]
Length = 177
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 57/165 (34%), Gaps = 19/165 (11%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC +++ DT + + +S + D + V
Sbjct: 32 GCSSNPVVEEQQTSTDIEDTSVQTGQVDTS----------AIDDAAVEVMTAD------- 74
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V + L+ + L + L P + ++ H D GT + N+ + + RA+
Sbjct: 75 TVFYFDFDKALLKPESRAALLEHSASLQNSP-RNVRLEGHADERGTREYNMALGERRANA 133
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+K +L+ + S I V + + N+R+E++
Sbjct: 134 VKEFLVLQ-GVSPGLIEVISYGEERAAAYGSNDDAWGLNRRVELK 177
>gi|332525605|ref|ZP_08401760.1| peptidoglycan-associated lipoprotein [Rubrivivax benzoatilyticus
JA2]
gi|332109170|gb|EGJ10093.1| peptidoglycan-associated lipoprotein [Rubrivivax benzoatilyticus
JA2]
Length = 180
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 56/164 (34%), Gaps = 8/164 (4%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
CG + + ++ T N ++ Q ++ +
Sbjct: 23 CGTTTDLSENKAPVETRPTADANANANATP-------QSKVATVELSARDAAAAAAAKAR 75
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ ++ P++ A L + + + HTD G + NL + Q+RA+ +
Sbjct: 76 TVYFDFDSYVVKDEYKPVIDANAKFLTLDKTVRLTAEGHTDERGGREYNLALGQKRAEAV 135
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L ++ + F + P D + N+R+E++
Sbjct: 136 VKALQV-MGAAAGQVEPVSFGKERPADPGHDEAAWSKNRRVELK 178
>gi|332283816|ref|YP_004415727.1| OmpA/MotB domain protein [Pusillimonas sp. T7-7]
gi|330427769|gb|AEC19103.1| OmpA/MotB domain protein [Pusillimonas sp. T7-7]
Length = 223
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 13/144 (9%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--- 106
E L + + + I I + ++ L+ + +L+ + L+ +
Sbjct: 65 LEQALARPLAEGSVTL--IDGRIGIS-GSVLFALNSAQLQAEGHDVLESLVAPLSDYLQS 121
Query: 107 PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
++ + TD +N +S +RA + LI G+ S+ + F +
Sbjct: 122 HDQILMVSGFTDDQQVLQGNRRFDDNWDLSAQRALTVTRALIAAGIPSSSVFAAA-FGAE 180
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFP 184
P+ +N + GR N+R+EI P
Sbjct: 181 QPVASNADEQGRAKNRRVEISPVP 204
>gi|294141706|ref|YP_003557684.1| OmpA family protein [Shewanella violacea DSS12]
gi|293328175|dbj|BAJ02906.1| OmpA family protein [Shewanella violacea DSS12]
Length = 335
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + V F + + + +L +A LN++PS + +Q +TD++G NL +S+
Sbjct: 213 VIPAMTNAVHFDFDSEVPLQTH-ILVEVARHLNQYPSASVVLQGYTDAVGPSGYNLKLSK 271
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI-----EIQIFPRG 186
RA + + +++ S+ IS+ +P N T+ R NN+R+ EI + P
Sbjct: 272 RRAVSVAA-YLKKLEVSDAQISIEALGETHPELDNITEEHRANNRRVYISIPEITVNPES 330
Query: 187 N 187
Sbjct: 331 T 331
>gi|290893982|ref|ZP_06556957.1| chemotaxis protein MotB [Listeria monocytogenes FSL J2-071]
gi|290556428|gb|EFD89967.1| chemotaxis protein MotB [Listeria monocytogenes FSL J2-071]
Length = 289
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 58/171 (33%), Gaps = 7/171 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A+ ++K + ++ + + + + T + + + I +
Sbjct: 109 ANEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYITAENLGTKMTTKYSDEGLLITIRDDI 168
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE------R 133
F L + + I + + T+ I S + ++ S
Sbjct: 169 LFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARA 228
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +++ + + + S RG+ P+ ND R+ N+R+EI + P
Sbjct: 229 VNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRP 279
>gi|288802401|ref|ZP_06407840.1| OmpA family protein [Prevotella melaninogenica D18]
gi|288334929|gb|EFC73365.1| OmpA family protein [Prevotella melaninogenica D18]
Length = 672
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 54/142 (38%), Gaps = 28/142 (19%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
G + I + L + L + +L + P+ I + +HTD +G+ N
Sbjct: 496 GINVPILIDNIFYDFDKATLRPESEKALDALVNLLKENPNVTIELSAHTDYLGSADYNKR 555
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP-------------IDTND--TKV--- 170
+SQ RAD + +YL G+ +R ++ G+ + P + ND T+
Sbjct: 556 LSQRRADAVVAYLTAHGIVRDR-LTPVGYGKERPKKIRKKVTEKYPWLKENDVLTEDFIK 614
Query: 171 ---------GRQNNQRIEIQIF 183
Q N+R E +
Sbjct: 615 KLDKEKQEIANQLNRRTEFTVL 636
>gi|206562551|ref|YP_002233314.1| hypothetical protein BCAM0690 [Burkholderia cenocepacia J2315]
gi|198038591|emb|CAR54550.1| putative outer membrane protein-OmpA family [Burkholderia
cenocepacia J2315]
Length = 214
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 11/149 (7%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF- 106
+ + L I +V F + L+ +L+ +A L +
Sbjct: 59 QQRKSLEQALAGPLAAGRVTLVNGRIGISGNVLFALNSDQLQPAGRDLLKTLAVPLATYL 118
Query: 107 --PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
++ + D +N +S +RA + LI GV ++ + F
Sbjct: 119 KTRDEILMVSGFADDQQVHAGNRLFADNWELSAKRALTVTRALIDAGVPASSVFAAA-FG 177
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ P+ +N GR N+R+EI PR +
Sbjct: 178 SEQPVSSNADDEGRAKNRRVEIAPVPRKS 206
>gi|209965120|ref|YP_002298035.1| hypothetical protein RC1_1826 [Rhodospirillum centenum SW]
gi|209958586|gb|ACI99222.1| chemotaxis MotB protein, putative [Rhodospirillum centenum SW]
Length = 344
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 14/150 (9%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ + L V +GD + V L + L +A L
Sbjct: 195 ARYRSEFFGRLREAL-GERDDVRVVGDRFVFQ-SEVLFGSGSVELGEAGKERLSRLAETL 252
Query: 104 NKFP-------STVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFI 152
+ V+ + HTDS+ +N +S RA + YLI +G+ ++R +
Sbjct: 253 KEIAARVPPEVDWVLRVDGHTDSVPIRSARFPSNWELSTARATAVVKYLIDQGIPADR-L 311
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ GF P+D + N+RIEI++
Sbjct: 312 AAAGFGQYQPLDPGTSAEALARNRRIEIKL 341
>gi|15598722|ref|NP_252216.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1]
gi|218890247|ref|YP_002439111.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|254242186|ref|ZP_04935508.1| hypothetical protein PA2G_02920 [Pseudomonas aeruginosa 2192]
gi|9949675|gb|AAG06914.1|AE004773_3 probable outer membrane protein precursor [Pseudomonas aeruginosa
PAO1]
gi|126195564|gb|EAZ59627.1| hypothetical protein PA2G_02920 [Pseudomonas aeruginosa 2192]
gi|218770470|emb|CAW26235.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
Length = 321
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L L +I +L PS I + H+D+ G N +S+
Sbjct: 171 VKLAQVGFPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA + ++ I+VR + +YP+ N++ R N+R+ + + ++
Sbjct: 231 RALAV-QEYLKSNGVPESQINVRFYGERYPLVANNSAANRARNRRVTVHLSREAVVE 286
>gi|296157423|ref|ZP_06840258.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295892195|gb|EFG71978.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 584
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 49/113 (43%), Gaps = 5/113 (4%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF----PSTVIAIQSHTDSIGTLKNNLL 128
+ V + + + L A +LN + + + ++D++G + NL
Sbjct: 470 VLNLQVINFASASARVPASAVEDLNQSAHVLNACAGNGKTARLEVAGYSDNVGGEQANLQ 529
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S++RA+ + + + + +G+ P+ +NDT GR N+RIE
Sbjct: 530 LSKQRAEAV-RAYLVKTGVPADSLIAQGYGGARPVASNDTASGRFANRRIEFV 581
>gi|260773224|ref|ZP_05882140.1| sodium-type flagellar protein MotY precursor [Vibrio metschnikovii
CIP 69.14]
gi|260612363|gb|EEX37566.1| sodium-type flagellar protein MotY precursor [Vibrio metschnikovii
CIP 69.14]
Length = 325
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ V L K L IA + ++ + ++TD+ + +S+ RA+ ++ Y
Sbjct: 222 NSVELNKASQKRLAQIADYIRYNQDIDLVLVATYTDTSEGRNESQSLSERRAESLQRYFR 281
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G+ +R I V+G+ + PI N + +GR N+R+ I +
Sbjct: 282 TLGLPEDR-IQVQGYGQRRPIADNASPIGRDKNRRVVISL 320
>gi|229515018|ref|ZP_04404478.1| outer membrane protein [Vibrio cholerae TMA 21]
gi|229347723|gb|EEO12682.1| outer membrane protein [Vibrio cholerae TMA 21]
Length = 212
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK L +F+ T + A + + H+ ++ D + + +D+ + + +
Sbjct: 3 IKSWALPLFLCTVTT---SALANQGQYTKHEGDEYDYRPTPLANQIADLQDDDRDGVINA 59
Query: 62 ---------GIVVSRIGDMITCYIPV-----HVSFVSEVFLEKKFLPMLQLIATILNKFP 107
G + G + +E FL ++ +A L +P
Sbjct: 60 RDLCPDTPKGSEIDNDGCGTFVKSSQMQQLHILFANDSSSIEPAFLTQIRQMAEFLQTYP 119
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
ST I +Q + +G+ ++NL++S++R++ ++ L+ R + +++ G+
Sbjct: 120 STSIELQGYASKVGSAEHNLVLSKQRSEAVRDQLL-RYGVAPERVNIVGYGDSVLEVEGT 178
Query: 168 TKVGRQNNQRIEIQIFP-RGNIKK 190
V N+R+ + +G + K
Sbjct: 179 DDVSHARNRRVTATVVGYKGEVVK 202
>gi|116872075|ref|YP_848856.1| chemotaxis (flagellar motor rotation) protein MotB [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|116740953|emb|CAK20073.1| chemotaxis (flagellar motor rotation) protein MotB [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 275
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 57/171 (33%), Gaps = 7/171 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A+ ++K + ++ + + + + + + + I +
Sbjct: 95 ANEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAERLGAKMTTKYSDEGLLITIRDDI 154
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE------R 133
F L + + I + + T+ I S + ++ S
Sbjct: 155 LFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARA 214
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +++ + + + S RG+ P+ ND R+ N+R+EI + P
Sbjct: 215 VNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRP 265
>gi|90577378|ref|ZP_01233189.1| putative sodium-type flagellar protein MotY precursor [Vibrio
angustum S14]
gi|90440464|gb|EAS65644.1| putative sodium-type flagellar protein MotY precursor [Vibrio
angustum S14]
Length = 298
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + + +L +A+ L + + I HTD++G+ NL IS+ RAD + S
Sbjct: 185 FQLGQRVVSSSQKQILADLASYLKHDKNVKRVLIDGHTDNVGSNVANLQISKIRADDVAS 244
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ-IFPRGNIKK 190
L + + I VR +YP+ N+T+ G+ N+R+ I+ I +K+
Sbjct: 245 ILREN-GVRSSLIEVRSHGSRYPVANNNTQHGKAKNRRVTIRAIRKEDAVKR 295
>gi|37704614|gb|AAR01579.1| OprF [Pseudomonas sp. MFY61]
Length = 316
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++P T ++ H
Sbjct: 209 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTTVEGH 268
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L Q+ + I G+ P+
Sbjct: 269 TDSVGPDAYNQKLSERRANAVKQVLTQQYGVESSRIDSVGYGETRPVA 316
>gi|89071216|ref|ZP_01158402.1| OmpA family protein [Oceanicola granulosus HTCC2516]
gi|89043258|gb|EAR49486.1| OmpA family protein [Oceanicola granulosus HTCC2516]
Length = 107
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + GD + +P + F L L +A LN +PST I + HTD+ G
Sbjct: 1 MRIDNTGDSLVVTLPQDILFDTDSATLSGSLQSDLNALARSLNNYPSTTITVIGHTDNTG 60
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
N +S+ RA + S LI GVS+ R +V G PI TN T+
Sbjct: 61 EASYNQNLSRRRAQAVTSTLISSGVSAGRINTV-GRGEDAPIATNLTE 107
>gi|103485733|ref|YP_615294.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
gi|98975810|gb|ABF51961.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
Length = 170
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 74 CYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+P + F + + + ++ IA L T ++ HTDS G+ NL +S+
Sbjct: 55 LSMPERLLFPTNESAVPAEQQERMRAIAMRLVSVGITTARVEGHTDSTGSSAYNLTLSRA 114
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA+ + + + + + G P+ NDT GRQ+N+R+ + + P
Sbjct: 115 RAEAVAAPMRAG-GMTFTADQIVGRGETLPLSGNDTAEGRQDNRRVVVIVTP 165
>gi|325954863|ref|YP_004238523.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323437481|gb|ADX67945.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 500
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 4/118 (3%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLL 128
+ + + + + +++ A ILN + I H D G N
Sbjct: 370 EVAKRLSNILFEYNSDKIVPSSYEDVRIAAQILNSEDLLANSYYIDGHADQRGRDAYNKA 429
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S +RA + + L++RG + ++ RG + T +T+ Q N+R+E + P+
Sbjct: 430 LSLKRAQALVNILVERGNVDRKRLTARGLGKTQLLCTENTEECYQRNRRVE--VLPKN 485
>gi|296387971|ref|ZP_06877446.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
PAb1]
gi|313108871|ref|ZP_07794854.1| putative outer membrane protein precursor, OmpA family [Pseudomonas
aeruginosa 39016]
gi|310881356|gb|EFQ39950.1| putative outer membrane protein precursor, OmpA family [Pseudomonas
aeruginosa 39016]
Length = 321
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L L +I +L PS I + H+D+ G N +S+
Sbjct: 171 VKLAQVGFPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA + ++ I+VR + +YP+ N++ R N+R+ + + ++
Sbjct: 231 RALAV-QEYLKSNGVPESQINVRFYGERYPLVANNSAANRARNRRVTVHLSREAVVE 286
>gi|187918041|ref|YP_001883604.1| outer membrane protein [Borrelia hermsii DAH]
gi|119860889|gb|AAX16684.1| outer membrane protein [Borrelia hermsii DAH]
Length = 385
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + + I + + + + +K L+ IA +L KF + I I+ HT
Sbjct: 263 DSIKIEKNENGIKLSLDIE-FYPDSFQIIQKEYSKLKHIANLLEKFKNNNILIEGHTAKF 321
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
T + +S++RA I +YL++ V + I +G+ K P + + + N+R+EI
Sbjct: 322 ETEQAMQELSEKRAHSIGNYLLKMKVKNKNQIFFKGWGAKKPKYASSSPLA-SKNRRVEI 380
Query: 181 QIFPR 185
I
Sbjct: 381 TILNN 385
>gi|116051525|ref|YP_789639.1| OmpA family membrane protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|115586746|gb|ABJ12761.1| putative outer membrane protein precursor, OmpA family [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 321
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L L +I +L PS I + H+D+ G N +S+
Sbjct: 171 VKLAQVGFPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA + ++ I+VR + +YP+ N++ R N+R+ + + ++
Sbjct: 231 RALAV-QEYLKSNGVPESQINVRFYGERYPLVANNSAANRARNRRVTVHLSREAVVE 286
>gi|86136016|ref|ZP_01054595.1| OmpA family protein [Roseobacter sp. MED193]
gi|85826890|gb|EAQ47086.1| OmpA family protein [Roseobacter sp. MED193]
Length = 188
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 4/134 (2%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D AE + G V R G++ + ++ L+ NK
Sbjct: 56 DGAEGYMTPHVTPNGKPVCRRGNLCGVMETDQFFATDKHYISAAGKTRLKEFFNS-NKGN 114
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I HTDS + + N+ +SQ RA+ + R +R + + P N
Sbjct: 115 VRSFVIAGHTDSRASDEYNIRLSQRRANAV---AGVAKSVGARIADIRAYGERDPRVPNT 171
Query: 168 TKVGRQNNQRIEIQ 181
+ N+R+EI
Sbjct: 172 SASNMAQNRRVEIY 185
>gi|62901665|gb|AAY18798.1| OmpA [Cronobacter sakazakii]
Length = 347
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 13/168 (7%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+ D +++ + ED + T + ++
Sbjct: 170 DAQTVGARPDNGMLSVGVSYRFGQQEDAAPVVAPAPAPAPEVQTKHFTLK-SDVLFNFNK 228
Query: 86 VFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L+ + L + + L+ + + TD IG+ N +S++RA + YLI
Sbjct: 229 ATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLIS 288
Query: 144 RGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ + IS RG P+ N D R ++R+EI++
Sbjct: 289 K-GIPSNKISARGMGESNPVTGNTCDNVKARAALIDCLGPDRRVEIEV 335
>gi|284036645|ref|YP_003386575.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283815938|gb|ADB37776.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 322
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 55/180 (30%), Gaps = 15/180 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
L ++ K ++ D + + AE VV +
Sbjct: 143 AASLTTKGVAKDLSFRTAQGDSLYGGIDFAFSGAEPAMSTDTATAPAVVKLTEPTTEKAL 202
Query: 77 PVHVSFVS--------------EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
F S + L+ + + HTDS G
Sbjct: 203 AEAEKFTSVFKPIDLYFPLAQANYLQTDETKKFFAEAVAYLSSHKDKKLVLTGHTDSSGP 262
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N+ +S++RA+ +K+ L + I VR P N T GR+ N+R+ + +
Sbjct: 263 DAVNMQLSRDRANDVKNKLR-KTGIEASQIEVRAKGETEPKADNSTISGRKANRRVSVVV 321
>gi|187919198|ref|YP_001888229.1| hypothetical protein Bphyt_4485 [Burkholderia phytofirmans PsJN]
gi|187717636|gb|ACD18859.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 215
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 57/152 (37%), Gaps = 13/152 (8%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
E L + + I+ + ++ L+ + +L+ +A
Sbjct: 58 ETQRRKTLEQALAGPLAAGRVTLVNGRIGIS---GNVLFALNSDQLQPQGRDLLKSLAGP 114
Query: 103 LNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRFIS 153
L+ + ++ + TD + +N +S +RA + LI GV ++ +
Sbjct: 115 LSAYLGANDEILMVSGFTDDQRLREGNRRFADNWELSAQRALTVTRALIDDGVPASSLFA 174
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
F P+ +N + GR N+R+EI PR
Sbjct: 175 AA-FGSGQPVSSNTDEQGRAKNRRVEIAPVPR 205
>gi|114797840|ref|YP_758889.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
gi|114738014|gb|ABI76139.1| ompA family protein [Hyphomonas neptunium ATCC 15444]
Length = 180
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ I + D + + L+ +L+ A LN +P+ + + + D
Sbjct: 54 SSITPGSLEDFRVNVGERVYFDLDQYGLDSDDQEILKRQAAWLNAYPNVRVLVAGNADER 113
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
GT + NL + + RA K YL+ GVS++R +V + + P+ N+
Sbjct: 114 GTREYNLALGERRASAAKDYLVSLGVSASRVDTVS-YGKERPVAGGSNDESWAMNR 168
>gi|327405866|ref|YP_004346704.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327321374|gb|AEA45866.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 687
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 11/118 (9%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + L + L + +L P+ I I HTD+ G N+ +S RA
Sbjct: 570 LKNVFFDLDKAILRPESFLELNKLRDLLKANPTMKIEIGGHTDTRGDAAKNMQLSDARAK 629
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTND----------TKVGRQNNQRIEIQIF 183
+K YLI + +S +GF PI T+D + Q N+R E +I
Sbjct: 630 SVKEYLIAQ-GIEASRLSSKGFGATKPIITDDVINKMATEKEKEKAHQENRRTEYKIV 686
>gi|218510720|ref|ZP_03508598.1| probable outer membrane lipoprotein [Rhizobium etli Brasil 5]
gi|218517107|ref|ZP_03513947.1| probable outer membrane lipoprotein [Rhizobium etli 8C-3]
Length = 178
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 2/168 (1%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-TGIVVSRIGD 70
M+ I+G + + T + + + + D
Sbjct: 1 MSAITGYTSRLLAAAMLLALAACSTTEIAALEEPTAAPMTGQTNDPAPGFENVAAGSEED 60
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I L+ + L A LN+ P+ ++ +Q D G+ +S
Sbjct: 61 FILNVGRRIYFKQDSATLDSVAMATLDNQAAWLNRNPTWLLKLQGFADDSGSASKMQTLS 120
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
Q+RAD +YL +GV R +G+ + + + N+R+
Sbjct: 121 QKRADAAMAYLASKGVDPKRMW-AKGYGNDREVRDCTDRSCKVQNRRV 167
>gi|260063550|ref|YP_003196630.1| OmpA family protein [Robiginitalea biformata HTCC2501]
gi|88782994|gb|EAR14168.1| OmpA family protein [Robiginitalea biformata HTCC2501]
Length = 652
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 6/116 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + + +Q + + K+PS I SHTDS G NL +SQ
Sbjct: 537 LLQLSTIYFDFDKANIRPDAEIEIQKVIAAMEKYPSLRIKANSHTDSRGPDAYNLALSQR 596
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
RAD Y+I + + + GF I+ D + + N+R E I
Sbjct: 597 RADSTVRYMISK-GIAPERLEGEGFGESRLINRCDDGVPCSAQEHELNRRSEFIIL 651
>gi|154174275|ref|YP_001408803.1| Omp18 [Campylobacter curvus 525.92]
gi|112803716|gb|EAU01060.1| Omp18 [Campylobacter curvus 525.92]
Length = 168
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 60/170 (35%), Gaps = 21/170 (12%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + E + L + Q+++
Sbjct: 18 GCSSKNPEVDMNANSNQTSDSNMGMSDADRLAALIANIESQVKN---------------- 61
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ + A I N+ + I ++ + D GT + N + +RA
Sbjct: 62 --VYFDFDKFNIKADQQGTVSANAAIFNQADAQALSIKVEGNCDEWGTDEYNYALGLKRA 119
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
K L++ GVS++R I+V F P+ T+ TK N+R E ++ P
Sbjct: 120 KSTKDALVRNGVSADR-IAVVSFGESNPVCTDKTKACDAQNRRAEFKVLP 168
>gi|149188836|ref|ZP_01867126.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1]
gi|148837256|gb|EDL54203.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1]
Length = 221
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 2/102 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L L +A L + + ++ HTD +G+ + N + RA +
Sbjct: 113 FAFDKYNLTPLAHKTLTGVAKQLAAN-NFEVTVEGHTDWVGSDEYNQALGMRRATATANE 171
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L +++ F P+ +N T GR N+R ++ I
Sbjct: 172 LASN-GVRKENTTLKTFGESEPLASNKTADGRSQNRRSDVYI 212
>gi|15641629|ref|NP_231261.1| outer membrane protein, putative [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121591817|ref|ZP_01679004.1| outer membrane protein, putative [Vibrio cholerae 2740-80]
gi|121730010|ref|ZP_01682424.1| outer membrane protein, putative [Vibrio cholerae V52]
gi|147673877|ref|YP_001217173.1| putative outer membrane protein [Vibrio cholerae O395]
gi|153214683|ref|ZP_01949543.1| outer membrane protein, putative [Vibrio cholerae 1587]
gi|153802238|ref|ZP_01956824.1| outer membrane protein, putative [Vibrio cholerae MZO-3]
gi|153819367|ref|ZP_01972034.1| outer membrane protein, putative [Vibrio cholerae NCTC 8457]
gi|153822202|ref|ZP_01974869.1| outer membrane protein, putative [Vibrio cholerae B33]
gi|227081775|ref|YP_002810326.1| putative outer membrane protein [Vibrio cholerae M66-2]
gi|229508265|ref|ZP_04397770.1| outer membrane protein [Vibrio cholerae BX 330286]
gi|229511496|ref|ZP_04400975.1| outer membrane protein [Vibrio cholerae B33]
gi|229518635|ref|ZP_04408078.1| outer membrane protein [Vibrio cholerae RC9]
gi|229520779|ref|ZP_04410202.1| outer membrane protein [Vibrio cholerae TM 11079-80]
gi|229523717|ref|ZP_04413122.1| outer membrane protein [Vibrio cholerae bv. albensis VL426]
gi|229529345|ref|ZP_04418735.1| outer membrane protein [Vibrio cholerae 12129(1)]
gi|229607839|ref|YP_002878487.1| outer membrane protein [Vibrio cholerae MJ-1236]
gi|254226120|ref|ZP_04919717.1| outer membrane protein, putative [Vibrio cholerae V51]
gi|254285433|ref|ZP_04960398.1| outer membrane protein, putative [Vibrio cholerae AM-19226]
gi|254848742|ref|ZP_05238092.1| outer membrane protein [Vibrio cholerae MO10]
gi|255744948|ref|ZP_05418898.1| outer membrane protein [Vibrio cholera CIRS 101]
gi|262161767|ref|ZP_06030785.1| outer membrane protein [Vibrio cholerae INDRE 91/1]
gi|262169640|ref|ZP_06037331.1| outer membrane protein [Vibrio cholerae RC27]
gi|262189703|ref|ZP_06048070.1| outer membrane protein [Vibrio cholerae CT 5369-93]
gi|298498295|ref|ZP_07008102.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9656135|gb|AAF94775.1| outer membrane protein, putative [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121546319|gb|EAX56596.1| outer membrane protein, putative [Vibrio cholerae 2740-80]
gi|121628244|gb|EAX60761.1| outer membrane protein, putative [Vibrio cholerae V52]
gi|124115205|gb|EAY34025.1| outer membrane protein, putative [Vibrio cholerae 1587]
gi|124122220|gb|EAY40963.1| outer membrane protein, putative [Vibrio cholerae MZO-3]
gi|125621355|gb|EAZ49692.1| outer membrane protein, putative [Vibrio cholerae V51]
gi|126510081|gb|EAZ72675.1| outer membrane protein, putative [Vibrio cholerae NCTC 8457]
gi|126520270|gb|EAZ77493.1| outer membrane protein, putative [Vibrio cholerae B33]
gi|146315760|gb|ABQ20299.1| putative outer membrane protein [Vibrio cholerae O395]
gi|150424705|gb|EDN16641.1| outer membrane protein, putative [Vibrio cholerae AM-19226]
gi|227009663|gb|ACP05875.1| putative outer membrane protein [Vibrio cholerae M66-2]
gi|227013531|gb|ACP09741.1| putative outer membrane protein [Vibrio cholerae O395]
gi|229333119|gb|EEN98605.1| outer membrane protein [Vibrio cholerae 12129(1)]
gi|229337298|gb|EEO02315.1| outer membrane protein [Vibrio cholerae bv. albensis VL426]
gi|229342334|gb|EEO07329.1| outer membrane protein [Vibrio cholerae TM 11079-80]
gi|229343324|gb|EEO08299.1| outer membrane protein [Vibrio cholerae RC9]
gi|229351461|gb|EEO16402.1| outer membrane protein [Vibrio cholerae B33]
gi|229355770|gb|EEO20691.1| outer membrane protein [Vibrio cholerae BX 330286]
gi|229370494|gb|ACQ60917.1| outer membrane protein [Vibrio cholerae MJ-1236]
gi|254844447|gb|EET22861.1| outer membrane protein [Vibrio cholerae MO10]
gi|255737419|gb|EET92814.1| outer membrane protein [Vibrio cholera CIRS 101]
gi|262021874|gb|EEY40584.1| outer membrane protein [Vibrio cholerae RC27]
gi|262028499|gb|EEY47154.1| outer membrane protein [Vibrio cholerae INDRE 91/1]
gi|262034416|gb|EEY52789.1| outer membrane protein [Vibrio cholerae CT 5369-93]
gi|297542628|gb|EFH78678.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|327484234|gb|AEA78641.1| outer membrane protein, putative [Vibrio cholerae LMA3894-4]
Length = 212
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 80/204 (39%), Gaps = 19/204 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK L +F+ T + A + + H+ ++ D + + +D+ + + +
Sbjct: 3 IKSWALPLFLCTVTT---SALANQGQYTKHEGDEYDYRPTPLANQIADLQDDDRDGVINA 59
Query: 62 ---------GIVVSRIGDMITCYIPV-----HVSFVSEVFLEKKFLPMLQLIATILNKFP 107
G + G + +E FL ++ +A L +P
Sbjct: 60 RDLCPDTPKGSEIDNDGCGTFVKSSQMQQLHILFANDSSSIEPAFLTQIRQMAEFLQTYP 119
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
ST I +Q + +G+ ++NL +S++R++ ++ L+ R + +++ G+
Sbjct: 120 STSIELQGYASKVGSAEHNLALSKQRSEAVRDQLL-RYGVAPERVNIVGYGDSVLEVEGT 178
Query: 168 TKVGRQNNQRIEIQIFP-RGNIKK 190
V N+R+ + +G + K
Sbjct: 179 DDVSHARNRRVTATVVGYKGEVVK 202
>gi|302347069|ref|YP_003815367.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
gi|302150976|gb|ADK97237.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
Length = 225
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
+DK E QL + + + + + F + L L A++
Sbjct: 74 MDKVAREAAQQLPNARVDKVTDANGLDCVKVTFDSGILFPLNGSNLSASAKNDLTKFASL 133
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ + + +AIQ +TD+ G NL +SQ RAD + SYL RGVSS + SV+GF P
Sbjct: 134 MQRNSNCDVAIQGYTDASGNDNINLPLSQRRADAVSSYLKGRGVSSRQIRSVQGFGSANP 193
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
I N T Q N+R+E+ +
Sbjct: 194 I-ENKTVS--QANRRVEVYL 210
>gi|193213735|ref|YP_001994934.1| OmpA/MotB domain-containing protein [Chloroherpeton thalassium ATCC
35110]
gi|193087212|gb|ACF12487.1| OmpA/MotB domain protein [Chloroherpeton thalassium ATCC 35110]
Length = 264
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
GD I I V+ L ML +A L + I HTDS G+ + N
Sbjct: 151 GDYIVLDIA---FPVNRTELPYSAHDMLDELAEKLLA-KRLSVEIVGHTDSKGSSRFNYN 206
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S +RA +K YLI+R ++ G PI N TK GR+ N+RIE+++
Sbjct: 207 LSVQRAAAVKKYLIRR-GVPASWLRAYGVGSNEPITRNKTKEGREKNRRIEVKVI 260
>gi|309751191|gb|ADO81175.1| Outer membrane protein P5 [Haemophilus influenzae R2866]
Length = 358
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 241 SDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 300
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 301 VANYFVAK-GVAADAISATGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAV 354
>gi|218461533|ref|ZP_03501624.1| probable outer membrane lipoprotein [Rhizobium etli Kim 5]
Length = 175
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 48/161 (29%), Gaps = 16/161 (9%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + + G + D I
Sbjct: 20 CSTTQIASLEELTAAPMTGQTNDPAPGFE---------------NVAAGSEEDFILNVGR 64
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L+ + L A LNK P+ ++ +Q D G+ +SQ+RA+
Sbjct: 65 RIYFKQDSAALDSVAMATLDSQADWLNKNPTWLLKLQGFADDSGSTSKMQTLSQKRAEAA 124
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+YL +GV R +G+ + + + N+R+
Sbjct: 125 MAYLASKGVDPKRMW-AKGYGNDREVRDCTDRSCKVQNRRV 164
>gi|37704622|gb|AAR01583.1| OprF [Pseudomonas sp. MFY69]
Length = 318
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 10/152 (6%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G + +D N ++DK D + V G +
Sbjct: 173 GGSGGQKAAPAPAPVAEVCSDSDNDGVCDNVDKCPD------TPANVTVDADGCPAVAEV 226
Query: 77 P----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++ ++ +A + ++P T ++ HTDS+G N +S+
Sbjct: 227 VRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTTVEGHTDSVGPDAYNQKLSER 286
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
RA+ +K L Q+ + + G+ P+
Sbjct: 287 RANAVKQVLTQQYGVESSRVDSVGYGETRPVA 318
>gi|16802728|ref|NP_464213.1| hypothetical protein lmo0686 [Listeria monocytogenes EGD-e]
gi|224498768|ref|ZP_03667117.1| hypothetical protein LmonF1_03321 [Listeria monocytogenes Finland
1988]
gi|224502009|ref|ZP_03670316.1| hypothetical protein LmonFR_05752 [Listeria monocytogenes FSL
R2-561]
gi|254830323|ref|ZP_05234978.1| hypothetical protein Lmon1_03142 [Listeria monocytogenes 10403S]
gi|254900078|ref|ZP_05260002.1| hypothetical protein LmonJ_09695 [Listeria monocytogenes J0161]
gi|255026595|ref|ZP_05298581.1| hypothetical protein LmonocytFSL_10100 [Listeria monocytogenes FSL
J2-003]
gi|284801016|ref|YP_003412881.1| hypothetical protein LM5578_0765 [Listeria monocytogenes 08-5578]
gi|284994158|ref|YP_003415926.1| hypothetical protein LM5923_0720 [Listeria monocytogenes 08-5923]
gi|5305456|gb|AAD41660.1| motility protein [Listeria monocytogenes]
gi|16410075|emb|CAC98764.1| motB [Listeria monocytogenes EGD-e]
gi|284056578|gb|ADB67519.1| hypothetical protein LM5578_0765 [Listeria monocytogenes 08-5578]
gi|284059625|gb|ADB70564.1| hypothetical protein LM5923_0720 [Listeria monocytogenes 08-5923]
Length = 275
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 58/171 (33%), Gaps = 7/171 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A+ ++K + ++ + + + + T + + + I +
Sbjct: 95 ANEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDDI 154
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE------R 133
F L + + I + + T+ I S + ++ S
Sbjct: 155 LFQSGSAELSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARA 214
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +++ + + + S RG+ P+ ND R+ N+R+EI + P
Sbjct: 215 VNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRP 265
>gi|325269448|ref|ZP_08136065.1| immunogenic lipoprotein PG3 [Prevotella multiformis DSM 16608]
gi|324988369|gb|EGC20335.1| immunogenic lipoprotein PG3 [Prevotella multiformis DSM 16608]
Length = 225
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
+DK E L + + + + + F + L L A +
Sbjct: 74 MDKVAREAAQALPNARVDKVTDANGLQCVKVTFDSGILFPLNGSNLNVSAKNDLTKFAGL 133
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ + + +AIQ +TD+ G N+ +SQ RA+ + SYL +GV+ + SV+GF P
Sbjct: 134 MKRNSNCDVAIQGYTDASGNDNINIPLSQRRAESVSSYLKGQGVTGRQIRSVQGFGSANP 193
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
I N T Q N+R+E+ +
Sbjct: 194 I-ENKTVS--QANRRVEVYL 210
>gi|308062136|gb|ADO04024.1| flagellar motor protein MotB [Helicobacter pylori Cuz20]
gi|308063396|gb|ADO05283.1| flagellar motor protein MotB [Helicobacter pylori Sat464]
Length = 255
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 65/208 (31%), Gaps = 33/208 (15%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + L
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYL 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIGTLKNNL---LISQERADVIKSYLIQRGVSSNRFI 152
+ IA I+ K P V I ++ TD K ++ + + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDTPLDKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL 202
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
S + PI ND+ R N R+EI
Sbjct: 203 SFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|149372159|ref|ZP_01891429.1| putative flagellar motor protein MotB [unidentified eubacterium
SCB49]
gi|149354926|gb|EDM43488.1| putative flagellar motor protein MotB [unidentified eubacterium
SCB49]
Length = 287
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ D I ++ ++ + V F L + +L +AT++N P ++ H
Sbjct: 135 MNDQDIQINVEKGVVFISLSDKVLFKSGSYNLSTRANEILGKVATVINGKPDFEALVEGH 194
Query: 117 TDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
TD++ +NL +S +RA + LI G + ++ I+ G P+ N +
Sbjct: 195 TDNVPYNGGGVLIDNLDLSAKRATAVVRQLISLGANPSQLIAA-GRGEFVPLVPNTSVEN 253
Query: 172 RQNNQRIEIQIFPR 185
+ N+R +I I P+
Sbjct: 254 KTLNRRTKIYILPK 267
>gi|94967622|ref|YP_589670.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
versatilis Ellin345]
gi|94549672|gb|ABF39596.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
versatilis Ellin345]
Length = 241
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 51/166 (30%), Gaps = 3/166 (1%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY--I 76
+ K+V +S +V K G + D + + D +
Sbjct: 75 SVDPNGSKQVTPVESTTYHLVAKGSGGTQDATARVTVSGGGASQPDEISLSDQQAFAKYV 134
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ +LQ A + P+ I+ H D G+ + NL + RA
Sbjct: 135 KDIYYDYDAYTVRAADQAVLQANANFFKQHPNIHFTIEGHCDERGSTEYNLALGDNRASA 194
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K+ I + + + + P T + Q N+R I
Sbjct: 195 AKN-AIVQAGIPASSVRTISYGKEKPFCTESNEQCWQQNRRAHFVI 239
>gi|53713187|ref|YP_099179.1| OmpA family outer membrane protein [Bacteroides fragilis YCH46]
gi|60681448|ref|YP_211592.1| OmpA family membrane protein [Bacteroides fragilis NCTC 9343]
gi|253566855|ref|ZP_04844307.1| OmpA family outer membrane protein [Bacteroides sp. 3_2_5]
gi|265763283|ref|ZP_06091851.1| OmpA family outer membrane protein [Bacteroides sp. 2_1_16]
gi|52216052|dbj|BAD48645.1| OmpA family outer membrane protein [Bacteroides fragilis YCH46]
gi|60492882|emb|CAH07657.1| putative outer membrane protein OmpA-family [Bacteroides fragilis
NCTC 9343]
gi|251944418|gb|EES84907.1| OmpA family outer membrane protein [Bacteroides sp. 3_2_5]
gi|263255891|gb|EEZ27237.1| OmpA family outer membrane protein [Bacteroides sp. 2_1_16]
gi|301162908|emb|CBW22455.1| putative outer membrane protein OmpA-family [Bacteroides fragilis
638R]
Length = 224
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 76/222 (34%), Gaps = 36/222 (16%)
Query: 1 MIKELGLSMFIMTTIS--GCGLASREKKKVFL---------------------------H 31
M K +++F+ + CG + K +
Sbjct: 1 MKKIKFMALFLSMALVFGSCGSMNNTAKGGVIGGGSGAALGAIIGGIAGKGKGAAIGAAV 60
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD--MITCYIPVHVSF-VSEVFL 88
+ G +DK E V+ + P + F + L
Sbjct: 61 GTAVGAGAGVLIGRKMDKKAAEAAKIKDAQVEQVTDNNGLAAVKVTFPSGILFAFNSSAL 120
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
L A IL + P+ +AI HTD +G+ + N +S RA +++YL GV
Sbjct: 121 SAASKQSLAEFANILKEDPTVDVAIIGHTDKVGSYEANQKVSANRAYAVENYLQACGVKP 180
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+F V G Y N+++ + N+R+EI ++ + K
Sbjct: 181 YQFKKVEGVGYSQ---YNESETP-EQNRRVEIFMYASEQMIK 218
>gi|149910946|ref|ZP_01899577.1| hypothetical protein PE36_12217 [Moritella sp. PE36]
gi|149806013|gb|EDM65997.1| hypothetical protein PE36_12217 [Moritella sp. PE36]
Length = 457
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 55/157 (35%), Gaps = 10/157 (6%)
Query: 35 DTDIVNKRFGSSLD-KAEDEFQMQLQDTGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKF 92
++ SSL K E Q ++ +VV + D I I + + +
Sbjct: 302 QPEVSAAVSASSLTLKLEQLLQTEIMRNIVVVQELSDRIRIRITSSDLFASGSDQINPAY 361
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSS 148
P+++ IA L I I HTD +N +S RA I L +
Sbjct: 362 QPIIRKIARTLESTQG-QILITGHTDKQQIISSRYPSNWHLSLARATSIADVLAKDTRLG 420
Query: 149 NRFISVRGFAYKYPIDTNDT--KVGRQNNQRIEIQIF 183
R + G P+ + T N+R+EI I
Sbjct: 421 GRLL-PEGRGSSEPLAVDPTFSHDQHALNRRVEIDIL 456
>gi|90408529|ref|ZP_01216686.1| peptidoglycan-associated lipoprotein [Psychromonas sp. CNPT3]
gi|90310348|gb|EAS38476.1| peptidoglycan-associated lipoprotein [Psychromonas sp. CNPT3]
Length = 176
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 64/170 (37%), Gaps = 24/170 (14%)
Query: 1 MIKELGLSMFIMTTISGC-------GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
MI + L M + C ++ V ++ +T +V+ + +K
Sbjct: 5 MISKSLLIALPMLALGACSSSSESDATSNETNSAVVSAETVETAVVDAMNLTDEEKLAKA 64
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ + +T I L+ ++ +L A L P+ ++ I
Sbjct: 65 YSYAILETTIQ----------------FDYDTSVLKARYTKILDAHAKFLVDHPTKLLTI 108
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ +TD GT + N+ + + RA + ++ +++ IS+ + + P+
Sbjct: 109 EGNTDERGTPEYNIALGERRAMSVS-TYLENMGVTSKQISIVSYGEEKPV 157
>gi|319944281|ref|ZP_08018557.1| outer membrane protein A [Lautropia mirabilis ATCC 51599]
gi|319742576|gb|EFV94987.1| outer membrane protein A [Lautropia mirabilis ATCC 51599]
Length = 220
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 68/214 (31%), Gaps = 32/214 (14%)
Query: 1 MIKELG-----LSMFIMTTISGCGL-----ASREKKKVFLHKSNDTDIVNKRFGSSLDKA 50
M K + + + +G G + + ++ + + K DKA
Sbjct: 1 MKKSVKLGALAATALLAACATGSGAKGPDVTADQNDTGYVTSRDGGVVTGKFGECFHDKA 60
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCY---------------------IPVHVSFVSEVFLE 89
++ +V + L+
Sbjct: 61 FKASHAIVECDPDLVPKAPPPPPPPPPPPPPPPPAAPQPTSEKVTFAADTFFGFDRAVLK 120
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ L I L+ VI HTDS+G N +S RA+ +K+YL+ +
Sbjct: 121 DEGKQKLDDIVNQLDGVALEVIVAVGHTDSVGPEAYNQRLSVRRAEAVKAYLVSK-GIEA 179
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ G P+ N TK GR N+R+EI++
Sbjct: 180 NRVYTEGKGEAQPVADNKTKEGRAKNRRVEIEVV 213
>gi|319426005|gb|ADV54079.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 289
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V L + L + L P+ + + ++TDS G N +S
Sbjct: 177 IAFTVLNYNEGGTDLTRFSKQQLTRVQEYLAYDPNVELVLVDAYTDSYGGRSVNQRVSDN 236
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ +K + + G+ +R ++V G + + +N+ R N+R+ I+I
Sbjct: 237 RAESVKEFFLSSGIPQDRILTV-GHGERRHVASNEDIDERARNRRVVIRI 285
>gi|197335718|ref|YP_002155279.1| outer membrane protein [Vibrio fischeri MJ11]
gi|197317208|gb|ACH66655.1| outer membrane protein [Vibrio fischeri MJ11]
Length = 219
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 79/214 (36%), Gaps = 36/214 (16%)
Query: 2 IKEL--GLSMFIMTTISG---------------CGLASREKKKVFLHKSN------DTDI 38
+K++ L++F +S CG E ++
Sbjct: 1 MKKICVLLALFSANVLSAEQNHNQEFNQLLDYYCGTEKVEFQEQVTIGEGKQILFHQGPF 60
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIV----------VSRIGDMITCYIPVHVSFV-SEVF 87
+ S D + F +Q + + D + + V F +
Sbjct: 61 MQVNAELSPDVIKRTFGNAMQQANLSNQCSEYLLSYAEVVEDNVEQKLFARVLFNFDQYS 120
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L ++ +LQ + L T + + HTD+ G N+ + R++ +K++L+ + +
Sbjct: 121 LTERSKYILQNVTEKLETQKDT-VLLNGHTDNKGRDNYNINLGLARSNSVKAFLLDQ-GA 178
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S + F + PID N T G+ +N+R++I+
Sbjct: 179 SKEQLESYSFGEQQPIDDNTTLEGQHHNRRVDIE 212
>gi|146292701|ref|YP_001183125.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|145564391|gb|ABP75326.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
Length = 289
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V L + L + L P+ + + ++TDS G N +S
Sbjct: 177 IAFTVLNYNEGGTDLTRFSKQQLTRVQEYLAYDPNVELVLVDAYTDSYGGRSVNQRVSDN 236
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ +K + + G+ +R ++V G + + +N+ R N+R+ I+I
Sbjct: 237 RAESVKEFFLSSGIPQDRILTV-GHGERRHVASNEDIDERARNRRVVIRI 285
>gi|124002746|ref|ZP_01687598.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123991974|gb|EAY31361.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 775
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+EK P L + L P + + ++D +G+ K N+ +S++RA +
Sbjct: 671 YFKFGSRKIEKYCHPSLDKLVNFLETNPKVKVELAGYSDELGSKKGNVGLSEDRAKAVVD 730
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
YLI++G+ +R ++ +G+ P N TK GR N+R+E ++
Sbjct: 731 YLIEKGIDFSR-LTYKGYGKVSPKHPNKTKHGRILNRRVECKVV 773
>gi|120599225|ref|YP_963799.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|120559318|gb|ABM25245.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
Length = 289
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V L + L + L P+ + + ++TDS G N +S
Sbjct: 177 IAFTVLNYNEGGTDLTRFSKQQLTRVQEYLAYDPNVELVLVDAYTDSYGGRSVNQRVSDN 236
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ +K + + G+ +R ++V G + + +N+ R N+R+ I+I
Sbjct: 237 RAESVKEFFLSSGIPQDRILTV-GHGERRHVASNEDIDERARNRRVVIRI 285
>gi|238024317|ref|YP_002908549.1| hypothetical protein bglu_2g09050 [Burkholderia glumae BGR1]
gi|237878982|gb|ACR31314.1| OmpA/MotB [Burkholderia glumae BGR1]
Length = 236
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 64/190 (33%), Gaps = 15/190 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L ++ + G+ + + + E L +
Sbjct: 22 LMAALLGAFVLILVGVIGMQLEASSRLADEIKQ--RQLETQRRKTLEQALAGPLAAGRVT 79
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF---PSTVIAIQSHTDSIG 121
+ + I + V+ L+ + +L+ +A L+ + ++ + D
Sbjct: 80 L--VDGRIGIS-GNVLFAVNSDQLQPQGRALLRSLAGPLSAYLRDRDQILMVSGFADDQQ 136
Query: 122 ------TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+N +S ERA + I+ GV + + F + P+ +N + GR N
Sbjct: 137 VHAGNARFADNWELSAERALTVTRAFIEAGVPAGSVFAAA-FGSEQPVSSNADEAGRAKN 195
Query: 176 QRIEIQIFPR 185
+R+EI PR
Sbjct: 196 RRVEIAAVPR 205
>gi|254438848|ref|ZP_05052342.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198254294|gb|EDY78608.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 743
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 53/144 (36%), Gaps = 13/144 (9%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP------ 107
+ + V GD + L + + +ATIL
Sbjct: 601 LLRNILEDVDGVRIQGDRFVFS-SEVLFEQGAAQLSGEGQREIAKVATILRDVAGDIPES 659
Query: 108 -STVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
VI + HTD++ G NN +SQ RA + Y++ ++ GF
Sbjct: 660 IDWVIRVDGHTDNVPLSGAGEFANNWELSQARALSVVLYMVNFLAIPPERLAANGFGQYQ 719
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
PI+ +T R N+RIE+++ R
Sbjct: 720 PINPANTTEARAQNRRIELKLTER 743
>gi|325927851|ref|ZP_08189076.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
perforans 91-118]
gi|325541841|gb|EGD13358.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
perforans 91-118]
Length = 368
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 38/128 (29%), Gaps = 7/128 (5%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ G + L+ +L+ +A L + P + + HTD
Sbjct: 242 VQTEGDGRSTVRLASASMFPSGSAELDADQTRLLERVAAALEQVPG-RVVVVGHTDDQPV 300
Query: 123 LKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQR 177
S RA + + L R + G PI R N+R
Sbjct: 301 RSLRFKDNFALSARRAQSVGAVLAAGLRD-PRRVQTSGAGDSQPIALPPQLPGNRARNRR 359
Query: 178 IEIQIFPR 185
+EI + P
Sbjct: 360 VEILLIPE 367
>gi|254236451|ref|ZP_04929774.1| hypothetical protein PACG_02437 [Pseudomonas aeruginosa C3719]
gi|126168382|gb|EAZ53893.1| hypothetical protein PACG_02437 [Pseudomonas aeruginosa C3719]
Length = 322
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L L +I +L PS I + H+D+ G N +S+
Sbjct: 172 VKLAQVGFPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDNSGNRLTNRDLSRR 231
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA + ++ I+VR + +YP+ N++ R N+R+ + + ++
Sbjct: 232 RALAV-QEYLKSNGVPESQINVRFYGERYPLVANNSAANRARNRRVTVHLSREAVVE 287
>gi|37704678|gb|AAR01611.1| OprF [Pseudomonas sp. MFY338]
Length = 315
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 208 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGH 267
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L + + + G+ P+
Sbjct: 268 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 315
>gi|154493612|ref|ZP_02032932.1| hypothetical protein PARMER_02952 [Parabacteroides merdae ATCC
43184]
gi|154086822|gb|EDN85867.1| hypothetical protein PARMER_02952 [Parabacteroides merdae ATCC
43184]
Length = 662
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + L + ILN P+ I + +HTD G+ + N ++Q R
Sbjct: 520 VVIENIFYDFDKATLRPESKKALDEMIKILNDNPNVTIELGAHTDRKGSEQYNERLAQRR 579
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND---------------TKV-------- 170
A + YLI + + +G+ P N T+
Sbjct: 580 AQSVVDYLIAG-GIAQDRLEAKGYGESVPKAINKRMAKNYDFLNEGDVLTEEFIERMTPE 638
Query: 171 ----GRQNNQRIEIQIF 183
Q N+R E ++
Sbjct: 639 QQEIADQINRRTEFKVL 655
>gi|288801975|ref|ZP_06407416.1| lipoprotein PG3 [Prevotella melaninogenica D18]
gi|288335410|gb|EFC73844.1| lipoprotein PG3 [Prevotella melaninogenica D18]
Length = 225
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
+DK E QL + + + + + F + L L A++
Sbjct: 74 MDKVAREAAQQLPNARVDKVTDANGLDCVKVTFDSGILFPLNGSNLSASAKNDLTKFASL 133
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ + + +AIQ +TD+ G NL +SQ RAD + SYL RGVSS + SV+GF P
Sbjct: 134 MQRNSNCDVAIQGYTDASGNDNINLPLSQRRADAVSSYLKGRGVSSRQIRSVQGFGSANP 193
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
I N T Q N+R+E+ +
Sbjct: 194 I-ENKTIS--QANRRVEVYL 210
>gi|85375193|ref|YP_459255.1| hypothetical protein ELI_11830 [Erythrobacter litoralis HTCC2594]
gi|84788276|gb|ABC64458.1| hypothetical protein ELI_11830 [Erythrobacter litoralis HTCC2594]
Length = 293
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V I + + + L+ + L A + ++ + +TD+ G+ +
Sbjct: 166 VGDIDNYLIKDTTNVYFDSGKWRLDGEAQRDLCQAAAQAEATDNALLLVVGYTDADGSEE 225
Query: 125 NNLLISQERADVIKSYLIQRGVS-SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S+ RA + +YL Q R ++ G A P N T G+ N+R+ + I
Sbjct: 226 LNQELSERRAARVTNYLQQECGWKPWRMLTPTGMAEADPAADNYTPQGKAQNRRVAVNIL 285
>gi|328542518|ref|YP_004302627.1| OmpA family protein [polymorphum gilvum SL003B-26A1]
gi|326412264|gb|ADZ69327.1| OmpA family protein [Polymorphum gilvum SL003B-26A1]
Length = 343
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------ST 109
++ + +GD + + L +A + + +
Sbjct: 205 EILSQRSDIRVVGDRFVFQ-SEVLFPSGSDEINPAGTVELGKLAEAILELEAQIPEEINW 263
Query: 110 VIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTDS G L+NN +S RA + YLI RGV R ++ GF P++
Sbjct: 264 VLRVDGHTDSRPLSGTGRLRNNWELSSARAISVVRYLIDRGVDPKRLVAA-GFGEFQPLE 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
D+ N+RIE+++ R
Sbjct: 323 DGDSPEALARNRRIELKLTER 343
>gi|326776942|ref|ZP_08236207.1| OmpA/MotB domain protein [Streptomyces cf. griseus XylebKG-1]
gi|326657275|gb|EGE42121.1| OmpA/MotB domain protein [Streptomyces cf. griseus XylebKG-1]
Length = 215
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 17/194 (8%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED------------EFQ 55
+ TT+ G + + + T + + +
Sbjct: 21 VLIAGTTLLGASPSYADDGPSVPPGTEATSEPPVPVDPNDPDLKMPEGGTLAPGRVLDIV 80
Query: 56 MQLQDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
++D G R + L + IA + K +T +
Sbjct: 81 QVVEDLGGEERREDSNADIKFALQAEVLFGKDSAKLGSAANARIAAIAAEIKKQNATKVR 140
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+ TD++G+ + ++S++RAD + L + + +RG+ +YPI +N + GR
Sbjct: 141 VFGFTDNLGSAAHGDVLSKQRADAVHGVLSKELGA-TITYEIRGYGEQYPIASNSNEEGR 199
Query: 173 QNNQRIEIQIFPRG 186
+ N+R+E+ FPRG
Sbjct: 200 KKNRRVEVS-FPRG 212
>gi|254466910|ref|ZP_05080321.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
gi|206687818|gb|EDZ48300.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
Length = 192
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 45/134 (33%), Gaps = 3/134 (2%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D AE + G V R G + ++ + L
Sbjct: 59 DGAEGFMTPHVTPDGKPVCRRGSICGVMPSDQFFATNKHQINAAGRKRLTEFFQKAQSNG 118
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I HTDS + + N+ +SQ RA+ + G N +R + + P N
Sbjct: 119 ARSFVIAGHTDSRASDEYNIGLSQRRANAVAQVARSAGAHVND---IRAYGEREPQVPNT 175
Query: 168 TKVGRQNNQRIEIQ 181
+ N+R+EI
Sbjct: 176 SAANMAKNRRVEIY 189
>gi|78356582|ref|YP_388031.1| motB protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78218987|gb|ABB38336.1| motB protein, putative [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 245
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 7/135 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIA 112
+ + I +IT +P V F + L ML+ + K I
Sbjct: 106 LNRKGVEGVIGAVFDEGVITIKVPAGVLFEKNSVDISADGLSMLEGLNDFFLKKKDQSIN 165
Query: 113 IQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I+ +TD ++N IS RA + + + + ++ G P+ N
Sbjct: 166 IRGYTDDSVPAAGSRFRDNWEISALRAVNVLRFFL-KSGIEPGRLTATGLGDLDPLFPNT 224
Query: 168 TKVGRQNNQRIEIQI 182
++ R N+R+E +
Sbjct: 225 SEENRAKNRRVEFVL 239
>gi|332969794|gb|EGK08805.1| OmpA/MotB domain protein [Psychrobacter sp. 1501(2011)]
Length = 211
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 69/191 (36%), Gaps = 14/191 (7%)
Query: 2 IKELGLSMF-----IMTTISGCGLASREKKKVFLHKSNDT---DIVNKRFGSSLDKAEDE 53
+K L + + + GC + + D D D+ +
Sbjct: 1 MKTLPVIAATFLSISLLGLVGCQTVPAPSSEAVVTTPIDPNKLDSDGDGVPDITDQCPNT 60
Query: 54 F-QMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ + G S + + + + L K++L L IA ++ K+P +
Sbjct: 61 PWNIVVDPNGCPASLLPKEGSVHAEYRGFYEEGSSQLTKEYLNELDKIAGLMEKYPDAFM 120
Query: 112 AIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
++++H +N +S R + +K+YLI + I + + PI +ND
Sbjct: 121 SLEAHISEPESKLKKNLSNQTLSLARVEGVKNYLILKHKIDPNRIRTYTYGAERPIASND 180
Query: 168 TKVGRQNNQRI 178
G + NQR+
Sbjct: 181 EVEGIRLNQRV 191
>gi|332664792|ref|YP_004447580.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332333606|gb|AEE50707.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 256
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 7/167 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ K + +++ + + + + +G+ + +
Sbjct: 77 KDLDATKGQISAVQQKLDMSQAELTKVKNEVNGIFSAYKSSGLTAEERDGRLYLMTSAPM 136
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQERA 134
+ L K + +AT L P I ++ HTDS ++N +S +R+
Sbjct: 137 DYKTGSYALSKAQREAVAQLATTLKSNPKLKILVEGHTDSDKVRGGAAYQDNWELSSKRS 196
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I LI + S ++ G P N TK G+ N+R ++
Sbjct: 197 LAICRELI-KNGVSPAQVATVGRGETMPKADNSTKEGKAANRRSDVV 242
>gi|330830247|ref|YP_004393199.1| sodium-type flagellar protein MotY [Aeromonas veronii B565]
gi|328805383|gb|AEB50582.1| Sodium-type flagellar protein MotY [Aeromonas veronii B565]
Length = 277
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
V + L L +I+ + V+ I +++DS G NL +S++
Sbjct: 163 IAFSVLTYDKNSDQLSIPSKRRLAMISEFIKADKGIDVVVIDAYSDSYGGRWPNLKLSEK 222
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
RAD IK + ISV G K + +N+T+ GR N+R+ I + G I
Sbjct: 223 RADAIKKVFVDL-GIDPGKISVEGHGEKQHVASNETEQGRAKNRRVVISMGRNGEI 277
>gi|260779363|ref|ZP_05888255.1| sodium-type flagellar protein MotY precursor [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605527|gb|EEX31822.1| sodium-type flagellar protein MotY precursor [Vibrio
coralliilyticus ATCC BAA-450]
Length = 293
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 38/109 (34%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ S V L K L IA + + + S S K+ E+
Sbjct: 180 IAFTILHYDRSSVQLNKASQKRLAQIAEYIRHNQDIDLVLVSTYTSNEESKSASQNLSEQ 239
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + I V+G+ + P+ N + +G+ N+R+ I +
Sbjct: 240 RAEVLRDYFKSLGLPEDRIQVQGYGRRRPVADNASPLGKDKNRRVVISL 288
>gi|261252913|ref|ZP_05945486.1| outer membrane protein [Vibrio orientalis CIP 102891]
gi|260936304|gb|EEX92293.1| outer membrane protein [Vibrio orientalis CIP 102891]
Length = 203
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 72/194 (37%), Gaps = 5/194 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + T A + K N D + + A D
Sbjct: 1 MNKSLLTMVIAATVFVAPLKAEDAYEYKETPKPNQVDDLLDEDKDGVINARDLCPQTPAK 60
Query: 61 TGIVVSRIGDMITCYIPVHV---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
I G I + + ++ FL ++ ++ L +PST I +Q +
Sbjct: 61 ADIDNDGCGTYIKTEEEMDLHILFQNDSSIIQPMFLAQIREMSEFLEAYPSTSIELQGYA 120
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+G + N +S+ RA+ +++ L+ S+ + + GF + D +V N++
Sbjct: 121 SKVGKAEYNQKLSERRAEAVEAALLDN-GVSSSRVRIVGFGDTRLDELGDDEVSHAMNRK 179
Query: 178 IEIQIFP-RGNIKK 190
+ + +GN+K+
Sbjct: 180 VIATVVGLKGNVKE 193
>gi|120555939|ref|YP_960290.1| hypothetical protein Maqu_3029 [Marinobacter aquaeolei VT8]
gi|120325788|gb|ABM20103.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 217
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 53/145 (36%), Gaps = 12/145 (8%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--- 106
E + L + I + ++ L+ + +L+ + L +
Sbjct: 64 LEQALEDPLTKGLVTFR--DGRIGIS-GNVLFELNSDQLQAEGEEVLESLIRPLQAYLEQ 120
Query: 107 PSTVIAIQSHTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
++ + TD + ++N +S +RA + L + G+ ++R + F +
Sbjct: 121 HDELLMVSGFTDDLPMHPGNRYQDNWGLSAQRALTVTRTLTELGLPNDRVFAAA-FGPHH 179
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRG 186
P N R N+R+EI PR
Sbjct: 180 PAVPNVDAESRAQNRRVEISTVPRA 204
>gi|47095252|ref|ZP_00232863.1| chemotaxis protein MotB [Listeria monocytogenes str. 1/2a F6854]
gi|258611605|ref|ZP_05234030.2| chemotaxis protein MotB [Listeria monocytogenes FSL N3-165]
gi|258612097|ref|ZP_05267393.2| chemotaxis protein MotB [Listeria monocytogenes F6900]
gi|293596468|ref|ZP_05261381.2| chemotaxis protein MotB [Listeria monocytogenes J2818]
gi|47016323|gb|EAL07245.1| chemotaxis protein MotB [Listeria monocytogenes str. 1/2a F6854]
gi|258601756|gb|EEW15081.1| chemotaxis protein MotB [Listeria monocytogenes FSL N3-165]
gi|258608279|gb|EEW20887.1| chemotaxis protein MotB [Listeria monocytogenes F6900]
gi|293589306|gb|EFF97640.1| chemotaxis protein MotB [Listeria monocytogenes J2818]
Length = 289
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 58/171 (33%), Gaps = 7/171 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A+ ++K + ++ + + + + T + + + I +
Sbjct: 109 ANEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDDI 168
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE------R 133
F L + + I + + T+ I S + ++ S
Sbjct: 169 LFQSGSAELSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARA 228
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +++ + + + S RG+ P+ ND R+ N+R+EI + P
Sbjct: 229 VNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRP 279
>gi|315127225|ref|YP_004069228.1| component of sodium-driven polar flagellar motor [Pseudoalteromonas
sp. SM9913]
gi|315015739|gb|ADT69077.1| component of sodium-driven polar flagellar motor [Pseudoalteromonas
sp. SM9913]
Length = 292
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ + L K L IA L PS I+I S+TDS G NNL +S++
Sbjct: 181 ISFTIMNYESNSSKLTKSSQQRLDKIAEYLKNDPSIESISIASYTDSYGGRWNNLDLSRK 240
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA IK Y++ GV + ++ GF K +DTND +GR N+R+ IQI
Sbjct: 241 RAKEIKDYMVGLGVDEAKVVT-EGFGEKRFVDTNDNILGRDKNRRLVIQI 289
>gi|254699266|ref|ZP_05161094.1| flagellar motor protein MotB [Brucella suis bv. 5 str. 513]
gi|261749708|ref|ZP_05993417.1| flagellar motor protein MotB [Brucella suis bv. 5 str. 513]
gi|261739461|gb|EEY27387.1| flagellar motor protein MotB [Brucella suis bv. 5 str. 513]
Length = 345
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 11/171 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV- 80
+ KK + D+ G A + + + V + + + V
Sbjct: 178 QAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPD-VTVVPVEGGVMIQLTDKVD 236
Query: 81 ---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERA 134
+ + + + ML+ IA ++ + P + I HTD+ +N +S RA
Sbjct: 237 YGMFTIGSAKPDARVVQMLERIAQVIARQPG-EVIISGHTDARPFKSATYDNWRLSSARA 295
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L++ G+ R + V G+A + P + ND N+RI+I I +
Sbjct: 296 QMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNA--AENRRIDIFIKSK 344
>gi|254465277|ref|ZP_05078688.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
gi|206686185|gb|EDZ46667.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
Length = 172
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 57/169 (33%), Gaps = 18/169 (10%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + +LD A + Q +
Sbjct: 19 CSNKPWNDDLNGAGGAGGAGAGAGAGAGALDPASPAYFQQTVGDRV-------------- 64
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + L LQ A L + + I+ H D GT + NL + +RA+
Sbjct: 65 --LFAIDQHTLSPAAQATLQGQARWLAQNGDYAVTIEGHADEQGTREYNLGLGAKRANAA 122
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ YLI +G+S +R I V + + P++ + N+R + + G
Sbjct: 123 REYLISQGISGSR-IKVVSYGKERPLEICSDETCYSKNRRA-VTVLAGG 169
>gi|37704676|gb|AAR01610.1| OprF [Pseudomonas sp. MFY315]
Length = 316
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 209 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGH 268
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L + + + G+ P+
Sbjct: 269 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 316
>gi|86130223|ref|ZP_01048823.1| type VI secretion system OmpA/MotB family protein [Dokdonia
donghaensis MED134]
gi|85818898|gb|EAQ40057.1| type VI secretion system OmpA/MotB family protein [Dokdonia
donghaensis MED134]
Length = 228
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 41/85 (48%)
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ +L P + I HTD++G ++N +++ IK YL R I+
Sbjct: 143 ELKELLKNNPDKKVTILGHTDNVGNARDNFSTGLKKSRQIKWYLTARRGIPRSKITATSR 202
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
+ PI +N+T GR+ N RIEI +
Sbjct: 203 GEEEPIASNNTVSGRRQNNRIEIIV 227
>gi|302346547|ref|YP_003814845.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
gi|302150388|gb|ADK96649.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
Length = 653
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 54/142 (38%), Gaps = 28/142 (19%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
G + I + L + L + +L + P+ I + +HTD +G+ N
Sbjct: 477 GINVPVLIDNIFYDFDKATLRPESEKALDALVNLLKENPNVTIELSAHTDYLGSADYNKR 536
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP-------------IDTND--TKV--- 170
+SQ RAD + +YL G+ +R ++ G+ + P + ND T+
Sbjct: 537 LSQRRADAVVAYLTAHGIVRDR-LTPVGYGKERPKKIRKKVTEKYPWLKENDVLTEDFIK 595
Query: 171 ---------GRQNNQRIEIQIF 183
Q N+R E +
Sbjct: 596 KLDKEKQEIANQLNRRTEFTVL 617
>gi|224539344|ref|ZP_03679883.1| hypothetical protein BACCELL_04249 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519039|gb|EEF88144.1| hypothetical protein BACCELL_04249 [Bacteroides cellulosilyticus
DSM 14838]
Length = 224
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 81/223 (36%), Gaps = 39/223 (17%)
Query: 2 IKELGLSMFI---MTTISGCGLASRE---------------------------KKKVFLH 31
+K++ +S+ + + C +
Sbjct: 1 MKKIKISVLLLSGAILLGSCSTMNNTAKGGVIGGGSGAAAGAIIGGLIGKGKGAAIGAAV 60
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSF-VSEVF 87
+ G +DK + +++ + + + + F +
Sbjct: 61 GAAVGTGAGVAIGHKMDK-KAAEAAKIEGAQVEKVTDTNGLAAVKVTFESGILFGFNSST 119
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L L+ +A IL + P+T IAI HTD +GT + N+ +S++RA +++YL GVS
Sbjct: 120 LSNTSKSSLRELAQILKEDPTTDIAIVGHTDKVGTYEANMKVSKDRAYTVENYLQDCGVS 179
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
++F V G Y D + N+R++I ++ + K
Sbjct: 180 PSQFKKVEGVGYNQY----DDSMSASQNRRVDIYMYASEQMIK 218
>gi|148549735|ref|YP_001269837.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148513793|gb|ABQ80653.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 162
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 4/141 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATIL 103
+ E L+ G + G + V F S+ L + +++ I L
Sbjct: 24 APPKGLTPEQIAVLKREGFTPTDEGW--AYDLSGKVLFGSDLDSLNGQSQAIVERIGKAL 81
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + H DS G N +S+ RA + + + I RG P+
Sbjct: 82 LGVGIQGVRVDGHADSSGKAAYNQQLSERRAQSVTK-ALVGIGMQAQNIQSRGLGSSQPV 140
Query: 164 DTNDTKVGRQNNQRIEIQIFP 184
N T GR N+R+ I +
Sbjct: 141 ADNRTSAGRTENRRVSIVVAS 161
>gi|255008683|ref|ZP_05280809.1| OmpA family membrane protein [Bacteroides fragilis 3_1_12]
gi|313146419|ref|ZP_07808612.1| outer membrane protein [Bacteroides fragilis 3_1_12]
gi|313135186|gb|EFR52546.1| outer membrane protein [Bacteroides fragilis 3_1_12]
Length = 224
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 74/222 (33%), Gaps = 36/222 (16%)
Query: 1 MIKELGLSMFIMTTIS--GCGLASREKKKVFL---------------------------H 31
M K +++F+ + CG + K +
Sbjct: 1 MKKIKFMALFLSMALVFGSCGSMNNTAKGGVIGGGSGAALGAIIGGIAGKGKGAAIGAAV 60
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD--MITCYIPVHVSF-VSEVFL 88
+ G +DK E V+ + P + F + L
Sbjct: 61 GTAVGAGAGVLIGRKMDKKAAEAAKIKDAQVEQVTDNNGLAAVKVTFPSGILFAFNSSAL 120
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
L A IL + P+ +AI HTD +GT + N +S RA +++YL GV
Sbjct: 121 SAASKQSLAEFANILKEDPTVDVAIIGHTDKVGTYEANQKVSSNRAYAVENYLQSCGVKP 180
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+F V G Y + +T N+R+EI ++ + K
Sbjct: 181 YQFKKVEGVGYSQ-YNEAETPE---QNRRVEIFMYASEQMIK 218
>gi|254779211|ref|YP_003057316.1| flagellar motor protein MotB [Helicobacter pylori B38]
gi|254001122|emb|CAX29077.1| Chemotaxis protein MotB (Motility protein B) [Helicobacter pylori
B38]
Length = 257
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 72/209 (34%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + L
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSNLLFENATSDAINQDMMLYL 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD+ K++ ++ RA + ++ +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDNTPLTKTRFKSHYELAANRAYRVMK-VLMQYGVDPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|119483418|ref|ZP_01618832.1| outer membrane protein F [Lyngbya sp. PCC 8106]
gi|119458185|gb|EAW39307.1| outer membrane protein F [Lyngbya sp. PCC 8106]
Length = 296
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 67 RIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
R + +P V F + L +L + L + + + +HTD G ++
Sbjct: 179 RASQGLVVTLPSDVLFATNTNSLRPGASVILDTLIADLENYKGASVRVAAHTDDTGKAQD 238
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
NL +S ++A+ I +YL S ++++ G+ P ND+ +Q N+RIE+ I P
Sbjct: 239 NLSLSLQQAEAIVAYLSTAIGSEYHWVAI-GYGEGQPTVENDSTTNKQLNRRIEVAIAP 296
>gi|184216035|gb|ACC77464.1| outer membrane protein [Lawsonia intracellularis]
Length = 340
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 2/109 (1%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + + ++ P + + TDS G NL +SQE
Sbjct: 231 VVVLRGVNFAFDSFALDDTAKAISEETVRLIRANPDFNVRLLGWTDSTGPDAYNLRLSQE 290
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RAD +K+ + + + + +G Y N TK GR N+R E+
Sbjct: 291 RADAVKN-FLVKMGIPSNRLFAKGMGKSYQ-YNNATKEGRYMNRRTELV 337
>gi|186471185|ref|YP_001862503.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184197494|gb|ACC75457.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 215
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 55/154 (35%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + I+ + ++ L+ + +L+ +A
Sbjct: 56 QMEAQRRKTLEQALAGPLAAGRVTLVNGRIGIS---GNVLFALNSDQLQPQGRDLLKSLA 112
Query: 101 TILNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRF 151
L+ + ++ + D +N +S +RA + I G+ ++
Sbjct: 113 APLSAYLRSHDEILMVSGFADDQQVRAGNRRFADNWELSAQRALTVTRAFIDSGIPASSV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+ +N GR N+R+EI PR
Sbjct: 173 FAAA-FGSEQPVSSNADSEGRAKNRRVEIAAVPR 205
>gi|296536326|ref|ZP_06898436.1| outer membrane protein [Roseomonas cervicalis ATCC 49957]
gi|296263348|gb|EFH09863.1| outer membrane protein [Roseomonas cervicalis ATCC 49957]
Length = 368
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L + ++ A ++ +T I + H D G+ + N +SQ RAD +
Sbjct: 265 VFFDFDRADLTDRARQIIAEAAQNSSRVQATRIEVAGHADRAGSPQYNQRLSQRRADAVA 324
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L+ R + I+V+ F P+ V N+R+EI +
Sbjct: 325 AELV-RLGVARSAITVQAFGESRPLVPTADGVREPQNRRVEIVL 367
>gi|161621187|ref|YP_001595073.1| flagellar motor protein MotB [Brucella canis ATCC 23365]
gi|254702390|ref|ZP_05164218.1| flagellar motor protein MotB [Brucella suis bv. 3 str. 686]
gi|260568709|ref|ZP_05839178.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261752951|ref|ZP_05996660.1| flagellar motor protein MotB [Brucella suis bv. 3 str. 686]
gi|161337998|gb|ABX64302.1| Protein mbhA [Brucella canis ATCC 23365]
gi|260155374|gb|EEW90455.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261742704|gb|EEY30630.1| flagellar motor protein MotB [Brucella suis bv. 3 str. 686]
Length = 366
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 11/171 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV- 80
+ KK + D+ G A + + + V + + + V
Sbjct: 199 QAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPD-VTVVPVEGGVMIQLTDKVD 257
Query: 81 ---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERA 134
+ + + + ML+ IA ++ + P + I HTD+ +N +S RA
Sbjct: 258 YGMFTIGSAKPDARVVQMLERIAQVIARQPG-EVIISGHTDARPFKSATYDNWRLSSTRA 316
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L++ G+ R + V G+A + P + ND N+RI+I I +
Sbjct: 317 QMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNA--AENRRIDIFIKSK 365
>gi|323528476|ref|YP_004230628.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323385478|gb|ADX57568.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 217
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 58/152 (38%), Gaps = 13/152 (8%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
E+ L + + I+ + ++ L+ + +L+ +A
Sbjct: 61 ETQRRKTLEEALAGPLAAGRVTLVNGRIGIS---GNVLFALNSDQLQPQGRDLLKSLAGP 117
Query: 103 LNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRFIS 153
L+ + ++ + TD + +N +S +RA + LI GV ++ +
Sbjct: 118 LSAYLRANDQLLMVSGFTDDQRLREGNRRFADNWELSAQRALTVTRALIDAGVPASSVFA 177
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
F P+ +N + GR N+R+EI PR
Sbjct: 178 AA-FGSAQPVSSNADEQGRARNRRVEIAPVPR 208
>gi|119478742|ref|ZP_01618600.1| Flagellar motor protein [marine gamma proteobacterium HTCC2143]
gi|119448371|gb|EAW29625.1| Flagellar motor protein [marine gamma proteobacterium HTCC2143]
Length = 130
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 103 LNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ I+IQ HTD+ ++N +S RA + L + + + R + V GFA
Sbjct: 1 MLATKKGAISIQGHTDNNPIKTTRFRSNWELSTSRAVSVAHALFEGNILNPRRVEVSGFA 60
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
P+ +NDT GR N+R+EI I
Sbjct: 61 ETRPLSSNDTVEGRAKNRRVEIVI 84
>gi|37704636|gb|AAR01590.1| OprF [Pseudomonas sp. MFY80]
gi|37704642|gb|AAR01593.1| OprF [Pseudomonas sp. MFY106]
gi|37704646|gb|AAR01595.1| OprF [Pseudomonas sp. MFY116]
gi|37704648|gb|AAR01596.1| OprF [Pseudomonas sp. MFY122]
Length = 316
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 209 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGH 268
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L + + + G+ P+
Sbjct: 269 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 316
>gi|37704658|gb|AAR01601.1| OprF [Pseudomonas sp. MFY152]
gi|37704674|gb|AAR01609.1| OprF [Pseudomonas sp. MFY314]
Length = 316
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 209 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGH 268
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L + + + G+ P+
Sbjct: 269 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 316
>gi|319639245|ref|ZP_07993996.1| outer membrane protein class 4 [Neisseria mucosa C102]
gi|317399429|gb|EFV80099.1| outer membrane protein class 4 [Neisseria mucosa C102]
Length = 253
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 74/213 (34%), Gaps = 32/213 (15%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF------GSSLDKAEDE 53
M K+L L ++F+ SG +AS K S+ + + + S DKA
Sbjct: 1 MTKQLKLSALFVALVASGTAMASEAHTKHGYTVSSQSQEIVRNNYGECWKNSYFDKATQG 60
Query: 54 FQMQLQDTGIVVSRIG----DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ + D + + L + L +A L+
Sbjct: 61 RVECGDREAVAPVQQAPEYVDETVSLSTKTLFGFDKDNLRPEAQENLDALAQRLSNESVQ 120
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ ++ HTD +G+ + N +S+ RA+V+ +YL+ ++ IS G T +
Sbjct: 121 TVRVEGHTDFMGSEQYNQALSERRANVVANYLVG-HGVASSKISAVGLGESQARMTATCE 179
Query: 170 VGRQN--------------------NQRIEIQI 182
++R++++I
Sbjct: 180 AEVAKLGKKVSKAKKRAALIACIEPDRRVDVKI 212
>gi|254452952|ref|ZP_05066389.1| OmpA/MotB [Octadecabacter antarcticus 238]
gi|198267358|gb|EDY91628.1| OmpA/MotB [Octadecabacter antarcticus 238]
Length = 668
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 13/133 (9%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHT 117
V GD + L + +A IL VI + HT
Sbjct: 537 VRIEGDRFVFS-SEVLFEQGAARLSADGQREIAKVAAILRDVAGDIPESIDWVIRVDGHT 595
Query: 118 DSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
D++ G NN +SQ RA + Y++ ++ GF PI+ DT R
Sbjct: 596 DNVPLSGAGEFANNWELSQARALSVVLYMVNFLAIPPDRLAANGFGQYQPINLEDTTEAR 655
Query: 173 QNNQRIEIQIFPR 185
N+RIE+++ R
Sbjct: 656 AQNRRIELKLTER 668
>gi|163800821|ref|ZP_02194721.1| putative outer membrane protein [Vibrio sp. AND4]
gi|159175170|gb|EDP59967.1| putative outer membrane protein [Vibrio sp. AND4]
Length = 204
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 68/197 (34%), Gaps = 12/197 (6%)
Query: 2 IKELGLSMFIMTTIS---GCG----LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
+K + + T ++ + K + D D L A EF
Sbjct: 1 MKATKILFVLGTILTTQHALAEDEYDYAETPKAEQVADLQDDDNDGVINARDLCPATPEF 60
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
D + + + I + ++ + + ++ LN++PST I ++
Sbjct: 61 SEINNDGCEEYIKSSERMEVRI---LFSNDSDDVDTVYRRQIGELSEFLNEYPSTSIELR 117
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ +G ++NL +S+ RA + + + + G + +V
Sbjct: 118 GYASKVGGSEHNLDLSKRRASNV-RTALLGYGIDPARVRIVGLGDTHLEQQGTDEVSHAL 176
Query: 175 NQRIEIQIFP-RGNIKK 190
N+R+ + +G IKK
Sbjct: 177 NRRVTASVIGYKGEIKK 193
>gi|146281586|ref|YP_001171739.1| outer membrane protein [Pseudomonas stutzeri A1501]
gi|145569791|gb|ABP78897.1| probable outer membrane protein [Pseudomonas stutzeri A1501]
Length = 343
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
S+V L+ L +I L PS I + H+D+ G N +S+
Sbjct: 217 LRQSQIGFPSSDVALDALGRAKLDIILQYLRADPSVNRIQLDGHSDNSGNRLVNRDLSRR 276
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
RA ++ YLI + I+VR +YP+ N ++ R N+R+
Sbjct: 277 RALAVQEYLIAN-GVPEQQITVRFHGERYPLVANSSEANRAKNRRV 321
>gi|254509401|ref|ZP_05121484.1| sodium-type flagellar protein MotY (Polar flagellum motorprotein)
[Vibrio parahaemolyticus 16]
gi|219547675|gb|EED24717.1| sodium-type flagellar protein MotY (Polar flagellum motorprotein)
[Vibrio parahaemolyticus 16]
Length = 168
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 39/109 (35%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + V L K+ L IA + + + S K+ ER
Sbjct: 55 IAFTILHYDRTSVELNKQSQKRLAQIAEYIRHNQDIDLVLVSTYTDAEDSKSASQNLSER 114
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + I V+G+ + P+D N + +G+ N+R+ I +
Sbjct: 115 RAEVLQDYFKSLGLPEDRIRVQGYGKRRPVDDNASPIGKDRNRRVVISL 163
>gi|332993983|gb|AEF04038.1| sodium-type flagellar protein MotY [Alteromonas sp. SN2]
Length = 292
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L K L +I L + + + +TDS G NN +S RA+ +
Sbjct: 188 YQKNSTELTKYSQKRLTMIGEYLKEDSDLELVLLDGYTDSYGGRWNNEQLSIRRANEV-K 246
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + I + G K I NDT+ R N+R+ +++
Sbjct: 247 SYLTTIGVPDDRIQLTGHGEKRHIANNDTRESRAQNRRVVVRL 289
>gi|329296508|ref|ZP_08253844.1| outer membrane protein A [Plautia stali symbiont]
Length = 356
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ + N +S++RA
Sbjct: 229 SDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRIGSDQYNQKLSEKRA 288
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR-------QNNQRIEIQI 182
+ YL+ + IS RG P+ N D+ GR ++R+EI +
Sbjct: 289 QSVVDYLVSK-GIPANKISARGMGESNPVTGNTCDSVKGRNALIDCLAPDRRVEIDV 344
>gi|37704666|gb|AAR01605.1| OprF [Pseudomonas sp. MFY220]
gi|37704668|gb|AAR01606.1| OprF [Pseudomonas sp. MFY222]
Length = 315
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 208 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGH 267
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L + + + G+ P+
Sbjct: 268 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 315
>gi|315186730|gb|EFU20488.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578]
Length = 826
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 55/148 (37%), Gaps = 19/148 (12%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVS------FVSE--VFLEKKFLPMLQLIATILN 104
L T + V +P + + + ++ L L +A +L
Sbjct: 674 AKASALVVTDVYVVIKDGGAYISVPDIHFAPFTADYTDKVPSEIREENLRTLDEVAAMLK 733
Query: 105 KFPSTVIAIQSHTDSIGTLKNNL----------LISQERADVIKSYLIQRGVSSNRFISV 154
KFP + ++ H S+ +S+ RA+ ++ LI RGV +R +S+
Sbjct: 734 KFPQYTVQLEGHAVSLLWFDPERAKVEHQEVLVPLSRARAEAVRKALISRGVDPSR-LSI 792
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G+ PI R N+R+E +
Sbjct: 793 VGYGGSRPIVPFSDLKKRWVNRRVEFLL 820
>gi|332877818|ref|ZP_08445556.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684113|gb|EGJ56972.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 680
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ L L + T++ P+ I + SH D G + N+ +SQ R
Sbjct: 516 VLVDNVFYAFDSAELTDSSTLALDSLVTLMEDNPNITIELSSHCDYRGRDEYNIRLSQRR 575
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPID-------------TNDT------------ 168
A+ + YLI GV+++R ++ G+ P NDT
Sbjct: 576 AESVVKYLIAHGVATDR-LTPIGYGETRPKVIRKRLTERYPFLHENDTLTEAFIKKLPEE 634
Query: 169 --KVGRQNNQRIEIQIF 183
++ N+R E ++
Sbjct: 635 QQEICNALNRRTEFRVL 651
>gi|330998288|ref|ZP_08322113.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
gi|329568677|gb|EGG50478.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
Length = 673
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ L L + T++ P+ I + SH D G + N+ +SQ R
Sbjct: 516 VLVDNVFYAFDSAELTDSSTLALDSLVTLMEDNPNITIELSSHCDYRGRDEYNIRLSQRR 575
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPID-------------TNDT------------ 168
A+ + YLI GV+++R ++ G+ P NDT
Sbjct: 576 AESVVKYLIAHGVATDR-LTPIGYGETRPKVIRKRLTERYPFLHENDTLTEAFIKKLPEE 634
Query: 169 --KVGRQNNQRIEIQIF 183
++ N+R E ++
Sbjct: 635 QQEICNALNRRTEFRVL 651
>gi|315127296|ref|YP_004069299.1| chemotaxis protein [Pseudoalteromonas sp. SM9913]
gi|315015810|gb|ADT69148.1| putative chemotaxis protein [Pseudoalteromonas sp. SM9913]
Length = 320
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 62/156 (39%), Gaps = 7/156 (4%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE-KKFLPMLQL 98
K S L K + +++ + D + + + F S + K +++
Sbjct: 120 GKPLDSLLAKLQSSLIDEIRSGEASLELSQDWLVIELNSGLLFASGSAVAHNKAKEIVKK 179
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI----QRGVSSNRFISV 154
I I+ + I ++ +TD+ N + S V ++ I +R + +++
Sbjct: 180 IEAIIASVDNY-IRVRGYTDNETIR-NEIFRSNWELSVARATSILVELERLGIESARMAI 237
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
G+ P N+T+ GR N+++ I + G + K
Sbjct: 238 EGYGQYSPFADNNTEAGRAENRKVVIALSKYGLVPK 273
>gi|229525621|ref|ZP_04415026.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae bv.
albensis VL426]
gi|297578614|ref|ZP_06940542.1| sodium-type flagellar protein MotY [Vibrio cholerae RC385]
gi|229339202|gb|EEO04219.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae bv.
albensis VL426]
gi|297536208|gb|EFH75041.1| sodium-type flagellar protein MotY [Vibrio cholerae RC385]
Length = 294
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ V L K L IA + ++ + ++TDS T N+ +S++RA+ +
Sbjct: 191 TSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAE-VLREYF 249
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 250 KSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|91779292|ref|YP_554500.1| hypothetical protein Bxe_B0804 [Burkholderia xenovorans LB400]
gi|91691952|gb|ABE35150.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 215
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 57/152 (37%), Gaps = 13/152 (8%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
E L + + I+ + ++ L+ + +L+ +A
Sbjct: 58 ETQRRKTLEQALAGPLAAGRVTLVNGRIGIS---GNVLFALNSDQLQPQGRDLLKSLAGP 114
Query: 103 LNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRFIS 153
L+ + ++ + TD + +N +S +RA + LI GV ++ +
Sbjct: 115 LSAYLRANDEILMVSGFTDDQRLREGNRRFADNWELSAQRALTVTRALIDDGVPASSLFA 174
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
F P+ +N + GR N+R+EI PR
Sbjct: 175 AA-FGSGQPVSSNADEQGRARNRRVEIAPVPR 205
>gi|153829514|ref|ZP_01982181.1| sodium-type flagellar protein MotY [Vibrio cholerae 623-39]
gi|148874974|gb|EDL73109.1| sodium-type flagellar protein MotY [Vibrio cholerae 623-39]
Length = 294
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ V L K L IA + ++ + ++TDS T N+ +S++RA+ +
Sbjct: 191 TSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAE-VLREYF 249
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 250 KSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|239816213|ref|YP_002945123.1| hypothetical protein Vapar_3239 [Variovorax paradoxus S110]
gi|239802790|gb|ACS19857.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
Length = 218
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 55/148 (37%), Gaps = 14/148 (9%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF--- 106
+ + L + I V F + L+ + +L+ +A + +
Sbjct: 62 REALEQALAGPLAAGRVTLNNGRIGISGSVLFAFNSAELQPEGRQVLKSLAAPVASYLRA 121
Query: 107 PSTVIAIQSHTDSIGTLK---------NNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
V+ + TD + +N +S +RA + LI+ GV S+ + F
Sbjct: 122 RDEVLMVSGFTDDRQMRQSKDGNRPFADNWELSAQRALTVTRALIEEGVPSSSVFAAA-F 180
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + +N GR N+R+E+ PR
Sbjct: 181 GSEQAVASNADAEGRAKNRRVEMAPTPR 208
>gi|189463929|ref|ZP_03012714.1| hypothetical protein BACINT_00263 [Bacteroides intestinalis DSM
17393]
gi|189438502|gb|EDV07487.1| hypothetical protein BACINT_00263 [Bacteroides intestinalis DSM
17393]
Length = 666
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 47/137 (34%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I L + L + +LN P+ I + +H D G NL +SQ R
Sbjct: 526 VLIENIFYEFDRADLTPESTVALDELIQLLNDNPNVTIELSAHCDYKGNDDYNLRLSQRR 585
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYP---------------IDTNDTKV-------- 170
A+ + YLI +G + ++ +G+ + P + T+
Sbjct: 586 AESVVRYLI-KGGIDSERLTPKGYGEQQPKTVTNFTLKSAPFLKVGDVLTEEFIKNLPLE 644
Query: 171 ----GRQNNQRIEIQIF 183
N+R E ++
Sbjct: 645 QQEICNAINRRTEFKVL 661
>gi|254428132|ref|ZP_05041839.1| OmpA family protein [Alcanivorax sp. DG881]
gi|196194301|gb|EDX89260.1| OmpA family protein [Alcanivorax sp. DG881]
Length = 212
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 51/145 (35%), Gaps = 11/145 (7%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILN---KFPS 108
+ L D I V F + L+ + +L + L
Sbjct: 63 ALEEALADPLASGRVTFHNGRIGISGSVLFQLNSDQLQPEGEALLSDLVKPLQVFLSQHD 122
Query: 109 TVIAIQSH------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
++ + G +N +S +RA + LI++G+ +++ + F P
Sbjct: 123 DMLMVSGFTDDLPINRGNGRYADNWGLSAQRALTVTRTLIEQGMPADQVFAAA-FGDNQP 181
Query: 163 IDTNDTKVGRQNNQRIEIQIFPRGN 187
+ ND R N+R+E+ PR +
Sbjct: 182 VAPNDDADSRARNRRVELTTVPRQS 206
>gi|158318969|ref|YP_001511477.1| OmpA/MotB domain-containing protein [Frankia sp. EAN1pec]
gi|158114374|gb|ABW16571.1| OmpA/MotB domain protein [Frankia sp. EAN1pec]
Length = 200
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 67/191 (35%), Gaps = 13/191 (6%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN-KRFGSSLDKAEDEFQMQLQDT- 61
L L + ++G D R LD A + D+
Sbjct: 10 RLALVTAALWVLAGAESPGALGATSAPPPPADVPAEEITRSVRPLDAAGSVLTIDPADSV 69
Query: 62 --GIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ R GD +T I V F L + + +A + + + + HTD
Sbjct: 70 LPLVTEERSGDRVTVTISADVLFAFDSDDLTEAARTEIATLAGRVGP-ATRTVTVLGHTD 128
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGR 172
S+GT N+++SQ RA+ + L S R +S G P+ N D GR
Sbjct: 129 SLGTPAYNVILSQRRANAVADLLRPAVPSGTR-VSATGRGGADPVAPNTRPDGSDDAAGR 187
Query: 173 QNNQRIEIQIF 183
N+R++I
Sbjct: 188 ALNRRVQISFL 198
>gi|325915597|ref|ZP_08177905.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas vesicatoria ATCC 35937]
gi|325538157|gb|EGD09845.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas vesicatoria ATCC 35937]
Length = 439
Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 73 TCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + F + + + +L +A L K + + ++ HTD+ G N +S+
Sbjct: 324 LITLNDRILFDFDKSDIRPDAVRVLDTLAAALGKVTTQQMEVRGHTDAKGDDAYNQALSE 383
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQI 182
RA + + L RG + G P+ N D GRQ N+R+EI +
Sbjct: 384 RRAHAVLAALRTRGAAQGAGAKGYG--ESQPVAPNTVNGQDNPGGRQLNRRVEIFL 437
>gi|241759220|ref|ZP_04757326.1| outer membrane Protein p.iii [Neisseria flavescens SK114]
gi|241320356|gb|EER56653.1| outer membrane Protein p.iii [Neisseria flavescens SK114]
Length = 253
Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 75/213 (35%), Gaps = 32/213 (15%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF------GSSLDKAEDE 53
M K+L L ++F+ SG +AS K S+ + + + S DKA
Sbjct: 1 MTKQLKLSALFVALVASGTAMASEAHTKHGYTVSSQSQEIVRNNYGECWKNSYFDKATQG 60
Query: 54 FQMQLQDTGIVVSRIG----DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ + D + + L + L +A L+
Sbjct: 61 RVECGDREAVAPVQQAPEYVDETVSLSTKTLFGFDKDNLRPEAQENLDALAQRLSNKNVE 120
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ ++ HTD +G+ + N +S+ RA+V+ +YL+ R ++ IS G T +
Sbjct: 121 TVRVEGHTDFMGSEQYNQALSERRANVVANYLVGR-GVASSKISAVGLGESQARMTATCE 179
Query: 170 VGRQN--------------------NQRIEIQI 182
++R++++I
Sbjct: 180 AEVAKLGKKVSKAKKRAALIACIEPDRRVDVKI 212
>gi|163745845|ref|ZP_02153204.1| OmpA family protein [Oceanibulbus indolifex HEL-45]
gi|161380590|gb|EDQ05000.1| OmpA family protein [Oceanibulbus indolifex HEL-45]
Length = 231
Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 8/174 (4%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + ++ C S + ++ + + +FG+ A + + V
Sbjct: 14 LIAGTAALAGLTACA-PSNDPVYTQFYREAGSVVDTGQFGN----ATLHNRQVMTGEERV 68
Query: 65 VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + + V+F + L+ +L+ A + +FP + HTD +G+
Sbjct: 69 TFDLANRFANEVGSTVTFAFNSAQLDATAQAVLRQQAGWIRQFPEIRFRVYGHTDLVGSQ 128
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
N + RA + YL G+S +R +V + P+ + R N+R
Sbjct: 129 AYNRALGMRRAQAVVGYLSTLGISPSRLEAVVSYGETQPLIVTQGRERR--NRR 180
>gi|15641023|ref|NP_230654.1| sodium-type flagellar protein MotY [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|227081182|ref|YP_002809733.1| sodium-type flagellar protein MotY [Vibrio cholerae M66-2]
gi|229505393|ref|ZP_04394903.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae BX
330286]
gi|229510937|ref|ZP_04400416.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae B33]
gi|229518058|ref|ZP_04407502.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae RC9]
gi|229608412|ref|YP_002879060.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae
MJ-1236]
gi|254848138|ref|ZP_05237488.1| sodium-type flagellar protein MotY [Vibrio cholerae MO10]
gi|255744790|ref|ZP_05418741.1| sodium-type flagellar protein MotY precursor [Vibrio cholera CIRS
101]
gi|298498879|ref|ZP_07008686.1| sodium-type flagellar protein MotY [Vibrio cholerae MAK 757]
gi|9655471|gb|AAF94169.1| sodium-type flagellar protein MotY [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|227009070|gb|ACP05282.1| sodium-type flagellar protein MotY [Vibrio cholerae M66-2]
gi|229344773|gb|EEO09747.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae RC9]
gi|229350902|gb|EEO15843.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae B33]
gi|229357616|gb|EEO22533.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae BX
330286]
gi|229371067|gb|ACQ61490.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae
MJ-1236]
gi|254843843|gb|EET22257.1| sodium-type flagellar protein MotY [Vibrio cholerae MO10]
gi|255737821|gb|EET93215.1| sodium-type flagellar protein MotY precursor [Vibrio cholera CIRS
101]
gi|297543212|gb|EFH79262.1| sodium-type flagellar protein MotY [Vibrio cholerae MAK 757]
Length = 294
Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ V L K L IA + ++ + ++TDS T N+ +S++RA+ +
Sbjct: 191 TSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAE-VLREYF 249
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 250 KSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|297579202|ref|ZP_06941130.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297536796|gb|EFH75629.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 212
Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 75/191 (39%), Gaps = 18/191 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK L +F+ T + A + + H+ ++ D + + +D+ + + +
Sbjct: 3 IKSWALPLFLCTVTT---SALANQGQYTKHEGDEYDYRPTPLANQIADLQDDDRDGVINA 59
Query: 62 ---------GIVVSRIGDMITCYIPV-----HVSFVSEVFLEKKFLPMLQLIATILNKFP 107
G + G + +E FL ++ +A L +P
Sbjct: 60 RDLCPDTPKGSEIDNDGCGTFVKSSQMQQLHILFANDSSSIEPAFLTQIRQMAEFLQTYP 119
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
ST I +Q + +G+ ++NL +S++R++ ++ L+ R + +++ G+
Sbjct: 120 STSIELQGYASKVGSAEHNLALSKQRSEAVRDQLL-RYGVAPERVNIVGYGDSVLEAEGT 178
Query: 168 TKVGRQNNQRI 178
V N+R+
Sbjct: 179 DDVSHARNRRV 189
>gi|254522358|ref|ZP_05134413.1| OmpA domain protein [Stenotrophomonas sp. SKA14]
gi|219719949|gb|EED38474.1| OmpA domain protein [Stenotrophomonas sp. SKA14]
Length = 432
Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 2/111 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQE 132
L + +A+ L P + + +HTDS G+ N +SQ
Sbjct: 322 LNRTTLKFHAGTATLTGDSRQTIGAVASALRAVPAGARVEVAAHTDSAGSATTNQQLSQL 381
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ + L ++ + + G+ + PI N + GR N+RI ++
Sbjct: 382 RAEAVAQALQEQ-GVGSAALVPTGYGQEQPIADNRSDHGRALNRRISYRLL 431
>gi|17549701|ref|NP_523041.1| hypothetical protein RS03061 [Ralstonia solanacearum GMI1000]
gi|17431956|emb|CAD18633.1| putative outer membrane transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 215
Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 54/154 (35%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + I+ + ++ L+ + L +L+ +A
Sbjct: 56 QMEAQRRKTLEQALAGPLAAGRVTLVNGRIGIS---GSVLFALNSDQLQPEGLELLKSLA 112
Query: 101 TILNKF---PSTVIAIQSH------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L+ + ++ + +N +S +RA + LI G+
Sbjct: 113 GPLSAYLRSRDEILMVSGFADDQQVHAGNRRFADNWELSAKRALTVTRALIDAGIPGASV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+ +N GR N+R+EI PR
Sbjct: 173 FAAA-FGSEQPVSSNADDAGRAKNRRVEIAPVPR 205
>gi|322433237|ref|YP_004210458.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
gi|321165629|gb|ADW71331.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
Length = 438
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 39/117 (33%), Gaps = 1/117 (0%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
T +++ + + + + ++ L + P + I+ + D
Sbjct: 316 TPAEIAKSDVIFHENVQDALFDYDSAEIRPDAKVAIEHAGKFLTEHPDIQVLIEGYADDR 375
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ + NL + +RA + + + + + + T+ Q N+R
Sbjct: 376 GSAEYNLGLGAQRAS-AARTALMEQGIPPERLKIISYGKEAQVCVQQTEQCWQQNRR 431
>gi|91217237|ref|ZP_01254198.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
gi|91184580|gb|EAS70962.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
Length = 616
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
++ I +V ++ + L + IL + + I + SHTD G+
Sbjct: 494 EMTSTEAKILILQERIFFDYDKVNIKPEAAFELDKLIEILKENENINIQVVSHTDERGSG 553
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN---DTKVGRQNNQRIEI 180
N+ +SQ+RA +YLI+ GV R +S G I ++ + N+R E
Sbjct: 554 AYNMKLSQDRAGSTVAYLIENGVDPER-LSSEGKGKSELIKDCISGCSEEEHEENRRSEF 612
Query: 181 QIF 183
+I
Sbjct: 613 KIV 615
>gi|329124105|ref|ZP_08252652.1| outer membrane protein A [Haemophilus aegyptius ATCC 11116]
gi|327467530|gb|EGF13028.1| outer membrane protein A [Haemophilus aegyptius ATCC 11116]
Length = 348
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I +++ S + + +TD IG+ N+ +SQ+RAD
Sbjct: 231 SDVTFAFGKANLKPQAQATLDSIYGQMSQVKSAKVVVAGYTDRIGSDAFNVKLSQKRADS 290
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 291 VANYFVAK-GVAADAISATGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAV 344
>gi|315586519|gb|ADU40900.1| flagellar motor protein MotB [Helicobacter pylori 35A]
Length = 255
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 72/209 (34%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + L
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDSINQDMMLYL 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD K++ ++ RA + LI + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLI-QYGVNPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|24213198|ref|NP_710679.1| flagellar motor protein [Leptospira interrogans serovar Lai str.
56601]
gi|24193917|gb|AAN47697.1| flagellar motor protein [Leptospira interrogans serovar Lai str.
56601]
Length = 223
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 5/131 (3%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + + I + + + F L ++ + T+L I+ H
Sbjct: 78 IDAGKLKIKIIDGRMVVVLSSDILFPIGSAHLSPAGTAAIKEVTTLLASLEGKRFQIEGH 137
Query: 117 TDSIG---TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
TD N ++ RA + +I + IS P N + R
Sbjct: 138 TDDTPTGIKGYTNWELASSRALNVLHTMI-KAGMPEVRISAASMGASRPALPNTSPENRS 196
Query: 174 NNQRIEIQIFP 184
+N+RIEI I P
Sbjct: 197 SNRRIEIVIVP 207
>gi|78047693|ref|YP_363868.1| OmpA family protein [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|78036123|emb|CAJ23814.1| OmpA family membrane protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 438
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 38/128 (29%), Gaps = 7/128 (5%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ G + L+ +L+ +A L + P + + HTD
Sbjct: 312 VQTEGDGRSTVRLASASMFPSGSAELDADQTRLLERVAAALEQVPG-RVVVVGHTDDQPV 370
Query: 123 LKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQR 177
S RA + + L R + G PI R N+R
Sbjct: 371 RSLRFKDNFALSARRAQSVGAVLAAGLRD-PRRVQTSGAGDSQPIALPPQLPGNRARNRR 429
Query: 178 IEIQIFPR 185
+EI + P
Sbjct: 430 VEILLIPE 437
>gi|330814393|ref|YP_004358632.1| 18K peptidoglycan-associated outer membrane lipoprotein [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487488|gb|AEA81893.1| 18K peptidoglycan-associated outer membrane lipoprotein [Candidatus
Pelagibacter sp. IMCC9063]
Length = 155
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 34/178 (19%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L + + IS C +++ KV + D +
Sbjct: 4 ILKNTFLVVILGIFISACSTTAKKAGKV------------GDVYTGTDTVK--------- 42
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + V F + L L A + + I+ H D
Sbjct: 43 ----------YLATGVADRVFFATNSTGLTSAAKTTLTKQAGYIKS-SKIYVVIEGHADE 91
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + NL + + RA+ + YL+ + + I V + + P +T+ +K+ N+R
Sbjct: 92 RGTREYNLALGERRANAARDYLMAK-GVAKSSIKVISYGKERPANTDSSKLAWSQNRR 148
>gi|147674163|ref|YP_001216480.1| sodium-type flagellar protein MotY [Vibrio cholerae O395]
gi|229529898|ref|ZP_04419288.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae
12129(1)]
gi|146316046|gb|ABQ20585.1| sodium-type flagellar protein MotY [Vibrio cholerae O395]
gi|227012825|gb|ACP09035.1| sodium-type flagellar protein MotY [Vibrio cholerae O395]
gi|229333672|gb|EEN99158.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae
12129(1)]
Length = 294
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ V L K L IA + ++ + ++TDS T N+ +S++RA+ +
Sbjct: 191 TSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAE-VLREYF 249
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 250 KSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|37704638|gb|AAR01591.1| OprF [Pseudomonas sp. MFY81]
gi|37704640|gb|AAR01592.1| OprF [Pseudomonas sp. MFY82]
Length = 316
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 209 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGH 268
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L + + + G+ P+
Sbjct: 269 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 316
>gi|260467043|ref|ZP_05813223.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
gi|259029152|gb|EEW30448.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
Length = 343
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + + ++ +A + + P +
Sbjct: 205 EILADRENIRIVGDRFVFQ-SEVLFPTGSEVINDAGKVEMKKLADAIIELQKEIPPEINW 263
Query: 110 VIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S R+ + +LI+ GV +NR ++ GF P+D
Sbjct: 264 VLRVDGHTDNKPLSGTGRYRDNWELSTARSTSVVKFLIENGVPANRLVAA-GFGEFQPLD 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
DT+ R N+RIE+++ R
Sbjct: 323 PADTEEARNKNRRIELKLTER 343
>gi|144900188|emb|CAM77052.1| conserved hypothetical protein, secreted [Magnetospirillum
gryphiswaldense MSR-1]
Length = 196
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 71/197 (36%), Gaps = 17/197 (8%)
Query: 1 MIKELGLSMFIMTTISGCG---------LASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
MIK + +M ++ + C A ++ + + ++ + +S+ A
Sbjct: 1 MIKRVF-AMALLVATAACAPQSTVVLIPDADGHVGRIQVEGAGGAVLLEQLNTASIASAG 59
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVH------VSFVSEVFLEKKFLPMLQLIATILNK 105
++ + + +P L + ++ + K
Sbjct: 60 EKPSPAKPLDEARIKQTWADALAAMPDRPVTFQLYFSSGTADLLPEAAELVVQAVDLAKK 119
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P I I H D++G+ + N IS+ RA+V+++ +++R R I + P+
Sbjct: 120 RPHVFIMIAGHADAVGSDEVNDRISRRRAEVVRNLVVER-GLPPRAIVASSHGKRNPLVP 178
Query: 166 NDTKVGRQNNQRIEIQI 182
V N+R+ + +
Sbjct: 179 TKDGVAEPRNRRVTLTL 195
>gi|258591277|emb|CBE67574.1| OmpA/MotB domain protein precursor [NC10 bacterium 'Dutch
sediment']
Length = 214
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/201 (10%), Positives = 60/201 (29%), Gaps = 24/201 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD-----------------------IVN 40
+ ++GC + V + + V
Sbjct: 11 STMTVAVMALFLTGCPKRPDVVETVPRPSAQQGEVGRPVPPPAPKVAAPEEKFPAEVAVQ 70
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ + ++ + + + + + + ++
Sbjct: 71 PPDTRPTAETGAVPEAKIAEAEVGQEAAAAVQARELKDIYFDFDQSAIRDDSKKLMDENV 130
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ + + I+ H+D G+ + NL + + RA + YL+ G+++NR ++ F +
Sbjct: 131 EWFRQHSAARVTIEGHSDERGSSEYNLALGERRARAARDYLVAAGIAANRIGTIS-FGKE 189
Query: 161 YPIDTNDTKVGRQNNQRIEIQ 181
P + + + N+R
Sbjct: 190 RPFVSGHDESTWRWNRRAHFV 210
>gi|330991015|ref|ZP_08314969.1| hypothetical protein SXCC_00923 [Gluconacetobacter sp. SXCC-1]
gi|329761836|gb|EGG78326.1| hypothetical protein SXCC_00923 [Gluconacetobacter sp. SXCC-1]
Length = 320
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 53/155 (34%), Gaps = 13/155 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ + + +QD V +GD + L + + ++++A
Sbjct: 169 EQLQQYRSEFFGRLRSVMQDHK-GVQIVGDRFVFQ-SEVLFPPGGADLSPEGVQEIRVLA 226
Query: 101 TILNKFPS-------TVIAIQSHTDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNR 150
L + ++ + H D +N +S RA + LI
Sbjct: 227 KTLRQVAQQIPADVPWILRVDGHADRQPIHSAFPSNWELSSARAITVVKLLIAE-GIDPH 285
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ GF+ P+D T N+RIE ++ R
Sbjct: 286 HLAATGFSDYQPLDKGTTPEAFARNRRIEFRLTDR 320
>gi|294852974|ref|ZP_06793646.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026]
gi|294818629|gb|EFG35629.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026]
Length = 366
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 11/171 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV- 80
+ KK + D+ G A + + + V + + + V
Sbjct: 199 QAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPD-VTVVPVEGGVMIQLTDKVD 257
Query: 81 ---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERA 134
+ + + + ML+ IA ++ + P + I HTD+ +N +S RA
Sbjct: 258 YGMFTIGSAKPDARVVQMLERIAQVIARQPG-EVIISGHTDARPFKSATYDNWRLSSARA 316
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L++ G+ R + V G+A + P + ND N+RI+I I +
Sbjct: 317 QMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNA--AENRRIDIFIKSK 365
>gi|332140722|ref|YP_004426460.1| sodium-type flagellar protein MotY [Alteromonas macleodii str.
'Deep ecotype']
gi|327550744|gb|AEA97462.1| sodium-type flagellar protein MotY [Alteromonas macleodii str.
'Deep ecotype']
Length = 290
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L K L +I L + + + +TDS G NN +S RA+ +KS
Sbjct: 186 YQNNSTELTKYSQKRLTMIGEYLKEDSELELVLLDGYTDSYGGRWNNEQLSIRRANEVKS 245
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YL GV +R I + G K I NDT+ R N+R+ +++
Sbjct: 246 YLTTLGVPEDR-IQLTGHGEKRHIAPNDTRESRAQNRRVVVRL 287
>gi|103488202|ref|YP_617763.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
gi|98978279|gb|ABF54430.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
Length = 294
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 2/141 (1%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D+ E + V I V + L + L A
Sbjct: 150 DQRFAEQTAATEALRSRVGDIDQYNVKNTTNVNFDVGKAVLSAQAKADLCATAAAAEAMD 209
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN-RFISVRGFAYKYPIDTN 166
+ ++ + +TDS G+ + N ++S++RA + ++L Q R ++ G A P N
Sbjct: 210 NALLLVVGYTDSTGSQEFNQMLSEKRAGAVVNHLQQACGWKPYRMLTPTGMAEADPAADN 269
Query: 167 DTKVGRQNNQRIEI-QIFPRG 186
+T G+ N+R+ + + +G
Sbjct: 270 ETPEGKAQNRRVAVNVLVSKG 290
>gi|217034137|ref|ZP_03439557.1| hypothetical protein HP9810_868g30 [Helicobacter pylori 98-10]
gi|216943421|gb|EEC22877.1| hypothetical protein HP9810_868g30 [Helicobacter pylori 98-10]
Length = 255
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 72/209 (34%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + L
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYL 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD K++ ++ RA + LI + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLI-QYGVNPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|182680245|ref|YP_001834391.1| OmpA/MotB domain-containing protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182636128|gb|ACB96902.1| OmpA/MotB domain protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 345
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 67/187 (35%), Gaps = 18/187 (9%)
Query: 14 TISGCGLASRE-KKKVFLHKSNDTDIVNKRFGS---SLDKAEDEFQMQLQDTGIVVSRIG 69
T+S +E + ++ S + ++ + L + +G
Sbjct: 162 TLSASETRDQESRAQIADLGSRLNVALAQKVQELAHYRSDFFGRLRQVL-GERPDLRIVG 220
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-------TVIAIQSHTDSIGT 122
D + + L L +AT LN V+ + HTD
Sbjct: 221 DRFVFQ-SELLFDSGQARLNPIGRQELDTLATALNDLVKTIPADLPWVMRVDGHTDKKQI 279
Query: 123 LK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+N +S RA + YL +GV +R ++ GF P+D D++ + N+RI
Sbjct: 280 KSVQFPSNWELSVARALAVVHYLTDKGVPPDR-LAAAGFGSFQPLDPGDSEEALKRNRRI 338
Query: 179 EIQIFPR 185
E++I +
Sbjct: 339 ELKITEK 345
>gi|308126356|ref|ZP_07663725.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
gi|308109333|gb|EFO46873.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
Length = 290
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L L + + L+ T + I H D++G NL +S+ RA +
Sbjct: 162 FQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHADNVGPRLTNLSVSRLRAQQVAD 221
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
LI + I VR +YP+ N+T G+ N+R+ +++
Sbjct: 222 ALIA-HGVNPNIIEVRSHGDRYPVANNNTAAGQAKNRRVTLRLV 264
>gi|23500858|ref|NP_700298.1| flagellar motor protein MotB [Brucella suis 1330]
gi|163845462|ref|YP_001623117.1| flagellar motor protein MotB [Brucella suis ATCC 23445]
gi|225628433|ref|ZP_03786467.1| Protein mbhA [Brucella ceti str. Cudo]
gi|254711223|ref|ZP_05173034.1| flagellar motor protein MotB [Brucella pinnipedialis B2/94]
gi|254711824|ref|ZP_05173635.1| flagellar motor protein MotB [Brucella ceti M644/93/1]
gi|254714893|ref|ZP_05176704.1| flagellar motor protein MotB [Brucella ceti M13/05/1]
gi|256015903|ref|YP_003105912.1| flagellar motor protein [Brucella microti CCM 4915]
gi|256030148|ref|ZP_05443762.1| flagellar motor protein MotB [Brucella pinnipedialis M292/94/1]
gi|256059799|ref|ZP_05449994.1| flagellar motor protein MotB [Brucella neotomae 5K33]
gi|256158327|ref|ZP_05456231.1| flagellar motor protein MotB [Brucella ceti M490/95/1]
gi|256252739|ref|ZP_05458275.1| flagellar motor protein MotB [Brucella ceti B1/94]
gi|260166800|ref|ZP_05753611.1| flagellar motor protein MotB [Brucella sp. F5/99]
gi|261216582|ref|ZP_05930863.1| flagellar motor protein MotB [Brucella ceti M13/05/1]
gi|261219818|ref|ZP_05934099.1| flagellar motor protein MotB [Brucella ceti B1/94]
gi|261318815|ref|ZP_05958012.1| flagellar motor protein MotB [Brucella pinnipedialis B2/94]
gi|261319452|ref|ZP_05958649.1| flagellar motor protein MotB [Brucella ceti M644/93/1]
gi|261323779|ref|ZP_05962976.1| flagellar motor protein MotB [Brucella neotomae 5K33]
gi|261756178|ref|ZP_05999887.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99]
gi|265987178|ref|ZP_06099735.1| flagellar motor protein MotB [Brucella pinnipedialis M292/94/1]
gi|265996841|ref|ZP_06109398.1| flagellar motor protein MotB [Brucella ceti M490/95/1]
gi|23464523|gb|AAN34303.1| chemotaxis motB protein [Brucella suis 1330]
gi|163676185|gb|ABY40295.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225616279|gb|EEH13327.1| Protein mbhA [Brucella ceti str. Cudo]
gi|255998563|gb|ACU50250.1| flagellar motor protein [Brucella microti CCM 4915]
gi|260918402|gb|EEX85055.1| flagellar motor protein MotB [Brucella ceti B1/94]
gi|260921671|gb|EEX88239.1| flagellar motor protein MotB [Brucella ceti M13/05/1]
gi|261292142|gb|EEX95638.1| flagellar motor protein MotB [Brucella ceti M644/93/1]
gi|261298038|gb|EEY01535.1| flagellar motor protein MotB [Brucella pinnipedialis B2/94]
gi|261299759|gb|EEY03256.1| flagellar motor protein MotB [Brucella neotomae 5K33]
gi|261736162|gb|EEY24158.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99]
gi|262551138|gb|EEZ07299.1| flagellar motor protein MotB [Brucella ceti M490/95/1]
gi|264659375|gb|EEZ29636.1| flagellar motor protein MotB [Brucella pinnipedialis M292/94/1]
Length = 366
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 11/171 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV- 80
+ KK + D+ G A + + + V + + + V
Sbjct: 199 QAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPD-VTVVPVEGGVMIQLTDKVD 257
Query: 81 ---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERA 134
+ + + + ML+ IA ++ + P + I HTD+ +N +S RA
Sbjct: 258 YGMFTIGSAKPDARVVQMLERIAQVIARQPG-EVIISGHTDARPFKSATYDNWRLSSARA 316
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L++ G+ R + V G+A + P + ND N+RI+I I +
Sbjct: 317 QMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNA--AENRRIDIFIKSK 365
>gi|224584423|ref|YP_002638221.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224468950|gb|ACN46780.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 358
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 231 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLISK-GIPSNKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 346
>gi|156977089|ref|YP_001447995.1| hypothetical protein VIBHAR_05874 [Vibrio harveyi ATCC BAA-1116]
gi|156528683|gb|ABU73768.1| hypothetical protein VIBHAR_05874 [Vibrio harveyi ATCC BAA-1116]
Length = 1211
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 62/170 (36%), Gaps = 17/170 (10%)
Query: 29 FLHKSNDTDIVNKRFGSSLDKAED--EFQMQL-----QDTGIVVSRIGDMITCYIPVHVS 81
S D G+ + + ++ ++ + + + + + + +
Sbjct: 208 ATTASVQADKAQAFQGTEEKYQNAVNQLRNEMPDLFVEEGSVSLDQRVEDVLLRLNMTFF 267
Query: 82 FVSEVFLEKKF--LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ +K + L P I I HT ++G+ NL +S++RA +K
Sbjct: 268 EFDSYQVTEKGSVHKRIAEQLQALISNP-FEIVITGHTCNMGSEAYNLALSEKRAVSVKE 326
Query: 140 YLIQRGVSSNR-------FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ R I +G+A P +TN T R N+R+EI +
Sbjct: 327 AILDAMSPDARSVWSPLFKIVAKGYAVSLPGNTNRTIEERVKNRRVEIYL 376
>gi|62179592|ref|YP_216009.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62127225|gb|AAX64928.1| putative hydrogenase, membrane component [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|322714061|gb|EFZ05632.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 350
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 223 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 283 QSVVDYLISK-GIPSNKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 338
>gi|307293378|ref|ZP_07573224.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
gi|306881444|gb|EFN12660.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
Length = 291
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 2/120 (1%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ L + L A+ + ++ + +TDS G + N
Sbjct: 168 DQYNVKSTTNVNFDTGKAVLSAQAKNDLCATASTAEGMSNALLLVVGYTDSTGGDEFNQE 227
Query: 129 ISQERADVIKSYLIQRGVSSN-RFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFPRG 186
+S++RA + +YL Q R ++ G A P+ +NDT G+ N+R+ + + +G
Sbjct: 228 LSEKRAGRVVNYLQQACGWKPYRMLTPTGMAKADPLASNDTAEGKAQNRRVAVNILVSKG 287
>gi|261211744|ref|ZP_05926031.1| outer membrane protein [Vibrio sp. RC341]
gi|260839094|gb|EEX65726.1| outer membrane protein [Vibrio sp. RC341]
Length = 212
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 77/201 (38%), Gaps = 13/201 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE----FQMQ 57
IK L +F+ T + E K + + + L +++ +
Sbjct: 3 IKSWALPLFLCTVTTSAFANQGEYIKHEGDEYDYRATPLADQIADLKDDDNDGVINARDL 62
Query: 58 LQDT--GIVVSRIGDMITCYIPV-----HVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
DT G + G + +E FL ++ +A L +PST
Sbjct: 63 CPDTPRGSEIDNDGCGTFIKASQMQQLHILFANDSSAIEPAFLTQIRQMAEFLQGYPSTS 122
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I +Q + +G NL +S++R++ ++ LI+ G+ +R +++ G+ + +
Sbjct: 123 IELQGYASKVGRADYNLALSKQRSEAVRDQLIRDGIDPSR-VNIVGYGDSVLEAEGEDDI 181
Query: 171 GRQNNQRIEIQIFP-RGNIKK 190
N+R+ + +G + K
Sbjct: 182 SHARNRRVTATVVGYKGEVVK 202
>gi|259908883|ref|YP_002649239.1| outer membrane protein A [Erwinia pyrifoliae Ep1/96]
gi|224964505|emb|CAX56015.1| Outer membrane protein A [Erwinia pyrifoliae Ep1/96]
gi|283478876|emb|CAY74792.1| Outer membrane protein A precursor [Erwinia pyrifoliae DSM 12163]
Length = 355
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + +TD IG+ + N +S++RA
Sbjct: 228 SDVLFTFNKANLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRIGSEQYNQKLSEKRA 287
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YL+ + + IS RG P+ N D+ GR ++R+EIQ+
Sbjct: 288 QSVVDYLVSK-GIPSNKISARGEGESNPVTGNTCDSVKGRAALIDCLSPDRRVEIQV 343
>gi|170693231|ref|ZP_02884391.1| type IV / VI secretion system protein, DotU family [Burkholderia
graminis C4D1M]
gi|170141761|gb|EDT09929.1| type IV / VI secretion system protein, DotU family [Burkholderia
graminis C4D1M]
Length = 446
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 45/142 (31%), Gaps = 8/142 (5%)
Query: 52 DEFQMQLQDTG---IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
L+ +G + G + L +P+L+ +A+ LN+
Sbjct: 306 KALLAPLEQSGALAVDEQADGRDTIRLAAGALFPSGGADLLPDEIPLLRRVASALNQVRG 365
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ---RGVSSNRFISVRGFAYKYPID- 164
VI + HTD + + + +G+ R + G PI
Sbjct: 366 RVIVV-GHTDDQPVHSLRFKDNFALSTARAQNTLAVLAQGLDDPRRLEANGAGSSQPIAT 424
Query: 165 TNDTKVGRQNNQRIEIQIFPRG 186
D R N+R+EI P
Sbjct: 425 PADLPANRARNRRVEILFIPEN 446
>gi|13472147|ref|NP_103714.1| hypothetical protein mlr2348 [Mesorhizobium loti MAFF303099]
gi|14022892|dbj|BAB49500.1| mlr2348 [Mesorhizobium loti MAFF303099]
Length = 442
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 8/167 (4%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
K+ + + +A + L T + +I + S
Sbjct: 277 PKQDAPAPEPPQPVDFALLPAFKAEAPASLKDALSGT--ESVSLAKLIIQSSNPELFQSS 334
Query: 85 EVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + + P++Q IA ++ I I HTD++ ++N L S +R ++ I
Sbjct: 335 RPTLSQGYEPLIQSIAKVILANQELIGNITIVGHTDNVRLQRSNPLASNQRLSEARAQTI 394
Query: 143 Q----RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ I G A P+ N T+ GR N+R+E+ + R
Sbjct: 395 ADLLVQAGVPQERIHSEGRADSDPVADNSTREGRALNRRVEVLVEKR 441
>gi|89094682|ref|ZP_01167618.1| sodium-type flagellar protein MotY, putative [Oceanospirillum sp.
MED92]
gi|89081028|gb|EAR60264.1| sodium-type flagellar protein MotY, putative [Oceanospirillum sp.
MED92]
Length = 285
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ ++ L L LIA + S I I H+DS G N +S+
Sbjct: 174 VARTAVLFPSAQWRLSDASRERLDLIALYVKNDDSVKGIYIDGHSDSQGRRLMNRDMSKR 233
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ + +YLI I+ R +YP+ N++K R N+R+ I++
Sbjct: 234 RAEEVTAYLIS-IGLDPNMITTRYHGERYPVVPNNSKKNRDRNRRVTIRL 282
>gi|323697552|ref|ZP_08109464.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323457484|gb|EGB13349.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 248
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 7/132 (5%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + + +IT +P V F +V L K ++ + K I I +TD
Sbjct: 114 EGLVSANFEDGVITLRVPGDVMFQSGQVELTPKGAQLVADLKDFFIKHKDQNIKIVGYTD 173
Query: 119 S-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ K+N IS RA + L+ + + ++ G AY P+ N ++ R
Sbjct: 174 NVRPGGNSRFKDNWEISAMRAVNVLRELL-KLGLESTRLTATGLAYLNPLYPNTSEEYRA 232
Query: 174 NNQRIEIQIFPR 185
N+R+E + R
Sbjct: 233 KNRRVEFILEKR 244
>gi|289665938|ref|ZP_06487519.1| OmpA family membrane protein [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 438
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 49/152 (32%), Gaps = 9/152 (5%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM--ITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ + + + V GD + L+ +L+
Sbjct: 288 AVRPATTPALAPLLAAEQRAGLLTVQTEGDGRSTVRLASASMFPSGSAELDADQTSLLER 347
Query: 99 IATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+A L + P + + HTD K+N +S RA+ + + L R +
Sbjct: 348 VAAALEQVPG-RVVVVGHTDDQPVRSLSFKDNFALSARRAESVGAVLAAGLRDR-RRVQT 405
Query: 155 RGFAYKYPID-TNDTKVGRQNNQRIEIQIFPR 185
G PI R N+R+EI + P
Sbjct: 406 SGAGDSQPIALPPQLPGNRARNRRVEILLIPE 437
>gi|241767706|ref|ZP_04765331.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
gi|241361321|gb|EER57865.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
Length = 219
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 58/157 (36%), Gaps = 14/157 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ E + L + V I+ + L + +L+ +
Sbjct: 59 QQEEQRRMALEKALAIPLASGRVTVHNGRIGIS---GSVLFATGSDELRPEGRQLLKSLV 115
Query: 101 TILNKF---PSTVIAIQSHTDS-------IGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L + ++ + TD+ +NL +S +RA + LI G+ S++
Sbjct: 116 PPLQVYLRERDEMLMVSGFTDNTTLLRGPHQRFADNLELSAQRALTVARALIDEGMPSSQ 175
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ F + P+ N + GR N+R+E+ PR +
Sbjct: 176 VFAAA-FGAEQPVADNADEKGRAQNRRVEMAPVPRAS 211
>gi|312892475|ref|ZP_07751968.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311295055|gb|EFQ72231.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 724
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 56/173 (32%), Gaps = 6/173 (3%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A+++ IV+ + + + Q Q D + I
Sbjct: 536 SATKDGYSTDEGTVTTKGIVSDTTLTITLRISKKAQDQQFDGPKKILCDSLRELFSIGKI 595
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + F+ L + +LN +P + + SH D+ ++ N+ +SQ R+
Sbjct: 596 YYDLDKSFIRPDAEGALNHLINLLNSYPGLKVIVASHCDTRASIDYNIGLSQRRSLSA-R 654
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPRGN 187
+ S I + F + T+ Q N+R E + G
Sbjct: 655 AYLLAHGVSENRIQMEYFGKSRLANKCADGVPCTEADHQLNRRTEFVLLKNGK 707
>gi|260582095|ref|ZP_05849889.1| outer membrane protein P5 [Haemophilus influenzae NT127]
gi|260094727|gb|EEW78621.1| outer membrane protein P5 [Haemophilus influenzae NT127]
Length = 350
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L + +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 233 SDVTFAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 292
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 293 VANYFVAK-GVAADAISATGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAV 346
>gi|189219864|ref|YP_001940505.1| Flagellar motor protein [Methylacidiphilum infernorum V4]
gi|189186722|gb|ACD83907.1| Flagellar motor protein [Methylacidiphilum infernorum V4]
Length = 311
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 12/150 (8%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATIL 103
K F ++Q V + I + + + +L+ + T L
Sbjct: 129 EMAQKLNALFAEEIQKGESWVIQNPQNIVIRFSKSALFSYGGIKISNSGKALLEKLITAL 188
Query: 104 NKF----PSTVIAIQSHTDSIGT-------LKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+ I + ++TD+ N IS R+ + LIQ
Sbjct: 189 KPYLDNSKEAKIEVCAYTDNDPPALEVQNVYPTNWEISAMRSAAVIRTLIQLSQLPEDIF 248
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S+ PI N + G++ N+R+EI +
Sbjct: 249 SLAAGGATKPIADNSFQEGKEKNRRVEITL 278
>gi|167035658|ref|YP_001670889.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166862146|gb|ABZ00554.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 163
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 4/141 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATIL 103
+ E L+ G + G + V F S+ L + +++ I L
Sbjct: 25 APPKGLTPEQIAVLKREGFTPTDEGW--AYDLSGKVLFGSDLDSLNGQSQSIVERIGKAL 82
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + H D+ G N +S+ RA + + + I RG P+
Sbjct: 83 LSVGIQGVRVDGHADASGKAAYNQQLSERRAQSVTK-ALVGVGMQPQNIQSRGLGSTQPV 141
Query: 164 DTNDTKVGRQNNQRIEIQIFP 184
N T GR N+R+ I +
Sbjct: 142 ADNRTSAGRTENRRVSIVVAS 162
>gi|37704610|gb|AAR01577.1| OprF [Pseudomonas sp. MFY57]
Length = 316
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++P T ++ H
Sbjct: 209 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGH 268
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L Q+ + + G+ P+
Sbjct: 269 TDSVGPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSVGYGETRPVA 316
>gi|84393403|ref|ZP_00992162.1| sodium-type flagellar protein MotY precursor [Vibrio splendidus
12B01]
gi|84376012|gb|EAP92901.1| sodium-type flagellar protein MotY precursor [Vibrio splendidus
12B01]
Length = 293
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ + L K L IA + ++ + ++TDS+ + + +S+
Sbjct: 180 ISFTILHYDRNSDQLNKSSRKRLSQIADYVRYNQDIDLVLVATYTDSVDSKGISQNLSER 239
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ ++ Y G+ +R I V+G+ + PI N++ +G+ N+R+ I +
Sbjct: 240 RAESLREYFKSLGLPEDR-IQVQGYGKRRPIADNNSPIGKDKNRRVVISL 288
>gi|37704628|gb|AAR01586.1| OprF [Pseudomonas sp. MFY72]
Length = 322
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 61/159 (38%), Gaps = 7/159 (4%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLH-KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
++ + G A+ + V +D D V D + +
Sbjct: 170 MAGLGVGFNFGGSKAAPAPEPVADVCSDSDNDGVCDNVDKCPDTPANVTVDANGCPAV-- 227
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+++ + V F + +++ ++ +A + ++PST ++ HTDS+GT
Sbjct: 228 ---AEVVRVQLDVKFDF-DKSKVKENSYADIKNLADFMKQYPSTSTTVEGHTDSVGTDAY 283
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
N +S+ RA+ ++ L+ ++ G+ P+
Sbjct: 284 NQKLSERRANAVRDVLVNEYGVEGGRVNAVGYGESRPVA 322
>gi|148244623|ref|YP_001219317.1| peptidoglycan-associated lipoprotein [Candidatus Vesicomyosocius
okutanii HA]
gi|146326450|dbj|BAF61593.1| peptidoglycan-associated lipoprotein [Candidatus Vesicomyosocius
okutanii HA]
Length = 189
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 2/102 (1%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ K + + A + P+ + ++ HTD GT + NL + + RA +K
Sbjct: 88 YFSDDGTEINKTSIKQIIKHANFMRNNPTLKLRLEGHTDERGTREYNLALGENRALNVKE 147
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I + I V F + P+ + Q N+R+E
Sbjct: 148 --ILGLYDLSSRIEVISFGEEKPMTQQHDEDAWQKNRRVEFV 187
>gi|78061843|ref|YP_371751.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77969728|gb|ABB11107.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 404
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 60/180 (33%), Gaps = 12/180 (6%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
+ + + G + ++ + + E + + ++ + + R
Sbjct: 229 LIVALLLGAGGYVAADRWVRTNEGLRASQLDVLARN-----LEQQLRDEVAAGNVELIRD 283
Query: 69 GDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTDSIG----T 122
+ + E + ++ + + + + DS
Sbjct: 284 SGRNALTLRFSGMFGPGEATVAPWGASVVASAGREIAAVTKGATLRVAGYADSTPISSTR 343
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N ++S RA + L+ GVS+ R ISV G + N T GR N+R+E+ I
Sbjct: 344 QASNQVLSDVRARHVAQILVAAGVSAPR-ISVEGNGDADSLADNGTASGRARNRRVEVTI 402
>gi|283853198|ref|ZP_06370451.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
gi|283571456|gb|EFC19463.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
Length = 245
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 68/212 (32%), Gaps = 34/212 (16%)
Query: 4 ELGLSMFIMTTISGCG------LASREKKKVFLHKSNDTDIVNKRFGSSLDKA--EDEFQ 55
+ L F + S S + + L + G + + +
Sbjct: 29 SMLLMTFFILLFSMSTLDVKKFSDSFDSVQNALGSKGKSKQAAPVSGQEMSALVEQARIK 88
Query: 56 MQLQDTGIVV-------------------SRIGDMITCYIPVHVSFV-SEVFLEKKFLPM 95
++ V + IT +P V F V L +
Sbjct: 89 QRIIGEQRRVFENFRSFVSQKGLEGVLGATLESGTITISLPTGVLFPKDGVDLTDEGKVR 148
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNR 150
L+ + L K I I+ TD + +N +S RA + Y++ G++ NR
Sbjct: 149 LRTLHEFLIKTAGERINIRGFTDDLPPAAGSRFRDNWEVSSLRAVAVLRYMLSLGMAPNR 208
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ G A P+ N T R NQR+E +
Sbjct: 209 -LTATGLADLEPLYPNTTPEHRARNQRVEFVL 239
>gi|58038715|ref|YP_190679.1| hypothetical protein GOX0240 [Gluconobacter oxydans 621H]
gi|58001129|gb|AAW60023.1| Flagellar motor protein [Gluconobacter oxydans 621H]
Length = 333
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 50/150 (33%), Gaps = 13/150 (8%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
+ + L+D V+ +GD + L + + +A +
Sbjct: 187 YRSEFFGRLRDLLKDQK-GVNVVGDRFVFQ-SEILFPQGSADLTPEGRKEITTLAHTFKQ 244
Query: 106 FPS-------TVIAIQSHTDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNRFISVR 155
S ++ + H D +N +S ERA + LI ++
Sbjct: 245 VASTIPTDLPWILRVDGHADRQPIHSAFPSNWELSSERAITVVKLLIAE-GVDPHHLAAT 303
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
GFA P+D T N+RIE ++ R
Sbjct: 304 GFADYQPLDAASTPAAYARNRRIEFRLTDR 333
>gi|84687276|ref|ZP_01015156.1| OmpA family protein [Maritimibacter alkaliphilus HTCC2654]
gi|84664709|gb|EAQ11193.1| OmpA family protein [Rhodobacterales bacterium HTCC2654]
Length = 222
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 54/161 (33%), Gaps = 9/161 (5%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ + + ++GC + + + + L +Q
Sbjct: 8 KIVATTSALALMAGCA-TDKTYLGEAGAIPARAEFGSATENNYL--------IQTGQKSY 58
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
VV + L+ + +L A+ + +FP + HTD +G+
Sbjct: 59 VVDLAERFNREVPDTVNFEFNSAVLDGQARQILARQASFIRQFPEVHFRVYGHTDKVGSN 118
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
N + RA + +Y +G+S +R +V + P+
Sbjct: 119 AYNRQLGLRRAQAVVNYFASQGISRSRVEAVVTYGETQPLV 159
>gi|319776591|ref|YP_004139079.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3047]
gi|317451182|emb|CBY87415.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3047]
Length = 348
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I +++ S +A+ +TD IG+ + N+ +SQ+RAD
Sbjct: 231 SDVTFAFGKANLKPQAQATLDSIYGQMSQVKSAKVAVAGYTDRIGSDEFNVKLSQKRADS 290
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 291 VANYFVAK-GVAADAISATGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAV 344
>gi|188575822|ref|YP_001912751.1| OmpA family membrane protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520274|gb|ACD58219.1| OmpA family membrane protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 438
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 9/153 (5%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM--ITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+++ + + + V GD + L+ +L+
Sbjct: 287 AAVRAATIPALAPLLAAEQRAGLLTVHTDGDGRSTVRLASASMFPSGSAELDADQTHLLE 346
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFIS 153
+A L + P + + HTD S RA+ + + L R +
Sbjct: 347 RVAAALEQVPG-RVVVVGHTDDQPVRSLRFKDNFALSARRAESVGAVLAAGLRDR-RRVQ 404
Query: 154 VRGFAYKYPID-TNDTKVGRQNNQRIEIQIFPR 185
G PI R N+R+EI + P
Sbjct: 405 TSGAGDSQPIALPPQLPGNRARNRRVEILLIPE 437
>gi|149372358|ref|ZP_01891546.1| outer membrane protein, peptidoglycan-associated lipoprotein
[unidentified eubacterium SCB49]
gi|149354748|gb|EDM43311.1| outer membrane protein, peptidoglycan-associated lipoprotein
[unidentified eubacterium SCB49]
Length = 631
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 6/120 (5%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
G I + + F+ LQ I ++LN++P I ++SHTDS NL
Sbjct: 512 GTDIGLLFNPIYFDLDKSFIRSDAAIELQKIISLLNQYPQMKIDVRSHTDSRADDAYNLD 571
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTND---TKVGRQNNQRIEIQIF 183
+S RA +YLI + + +S RG+ I +N T + Q N+R E I
Sbjct: 572 LSDRRAKATIAYLI-KNGIDSSRLSGRGYGETQLINGCSNGVDCTSIEHQLNRRSEFIIV 630
>gi|225686890|ref|YP_002734862.1| flagellar motor protein MotB [Brucella melitensis ATCC 23457]
gi|256261973|ref|ZP_05464505.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str.
63/9]
gi|225642995|gb|ACO02908.1| Protein mbhA [Brucella melitensis ATCC 23457]
gi|263091457|gb|EEZ15993.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str.
63/9]
gi|326411308|gb|ADZ68372.1| flagellar motor protein MotB [Brucella melitensis M28]
gi|326554597|gb|ADZ89236.1| flagellar motor protein MotB [Brucella melitensis M5-90]
Length = 366
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 9/170 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD---MITCYIPV 78
+ KK + D+ G A + + VV G +T +
Sbjct: 199 QAQPKKAETQEELIADLKKAAIGEPAPNAGKAAKPEPMPDVTVVPVEGGVMSQLTDKVDY 258
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERAD 135
+ + + + + ML+ IA ++ + P + I HTD+ +N +S RA
Sbjct: 259 GMFTIGSAKPDARVVQMLERIAQVIARQPG-EVIISGHTDARPFKSATYDNWRLSSARAQ 317
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L++ G+ R + V G+A + P + ND N+RI+I I +
Sbjct: 318 MAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNA--AENRRIDIFIKSK 365
>gi|254361857|ref|ZP_04977991.1| lipoprotein PlpD [Mannheimia haemolytica PHL213]
gi|3283200|gb|AAC32565.1| lipoprotein Plp4 [Mannheimia haemolytica]
gi|153093396|gb|EDN74387.1| lipoprotein PlpD [Mannheimia haemolytica PHL213]
Length = 284
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G+ + + L K ++ +A L + + + +TD +G+ NL
Sbjct: 134 NGNSSFALTGDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRLGSAAYNL 193
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN------NQRIEI 180
+SQ R++ +K+ L+Q+GV++ I G+ + D + G+ N+R+EI
Sbjct: 194 DLSQRRSNTVKARLVQQGVTAQ--IEAVGYGKANQVKACDGETGQALKDCLRPNRRVEI 250
>gi|218708964|ref|YP_002416585.1| sodium type flagellar protein MotY precursor [Vibrio splendidus
LGP32]
gi|218321983|emb|CAV17990.1| Sodium type flagellar protein MotY precursor [Vibrio splendidus
LGP32]
Length = 293
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ + L K L IA + ++ + ++TDS+ + + +S+
Sbjct: 180 ISFTILHYDRNSDQLNKSSRKRLSQIADYVRYNQDIDLVLVATYTDSVDSKGISQNLSER 239
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ ++ Y G+ +R I V+G+ + PI N++ +G+ N+R+ I +
Sbjct: 240 RAESLREYFKSLGLPEDR-IQVQGYGKRRPIADNNSPIGKDKNRRVVISL 288
>gi|297180147|gb|ADI16369.1| flagellar motor protein [uncultured bacterium HF130_12L15]
Length = 343
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + + + +A + + P +
Sbjct: 205 EILSDRENIRIVGDRFVFQ-SEVLFPSGSEVINDAGRTEMAKLAEAIIDLQKEIPPEINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + YLI +GV ++R ++ GF P+
Sbjct: 264 VLRVDGHTDNVPLSGTGRYRDNWELSSARATSVVKYLISQGVPASRLVAA-GFGEFQPLV 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
DT R N+RIE+++ R
Sbjct: 323 EGDTPDARNKNRRIELKLTER 343
>gi|288957797|ref|YP_003448138.1| chemotaxis protein [Azospirillum sp. B510]
gi|288910105|dbj|BAI71594.1| chemotaxis protein [Azospirillum sp. B510]
Length = 464
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 58/176 (32%), Gaps = 16/176 (9%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGS---SLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
++ +K ++ + + + + + L V +GD
Sbjct: 289 ASADQKVQIAELGARLNQALAAKVQDLARYKSEFFGRVREAL-GNRPDVRIVGDRFVFQ- 346
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDSIG---TLKNN 126
+ LE+ L +A L + + V+ + HTD +N
Sbjct: 347 SELLFPSGSATLEEAGKQRLADLARTLIEIGKVIPPDINWVLRVDGHTDIKPVRFQFSSN 406
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S RA + +LI + ++ F PID + N+RIEI++
Sbjct: 407 WELSSARALSVVKFLIDQ-GIPAERLAAAAFGEFQPIDPGTSDEALAKNRRIEIKL 461
>gi|208434727|ref|YP_002266393.1| flagellar motor rotation protein [Helicobacter pylori G27]
gi|208432656|gb|ACI27527.1| flagellar motor rotation protein [Helicobacter pylori G27]
Length = 257
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 71/209 (33%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P + F + + + + L
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLYL 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD+ K++ ++ RA + LI +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDNTPLTKTRFKSHYELAANRAYRVMKVLI-QYGVDPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|239905381|ref|YP_002952120.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
gi|239795245|dbj|BAH74234.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
Length = 234
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 5/124 (4%)
Query: 65 VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI--- 120
VS + + V F + ++ +A IL F + ++ H D
Sbjct: 99 VSNDSSGVLMQVNNSVMFKPGSAEITPAAAKIMDGVAKILRDFK-INLTVRGHADDDEGS 157
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + +S RA YL ++ + + G A P+ + + N+RIE
Sbjct: 158 GPYPSKWELSAARAAAAVRYLSEKAGIPSTRLRAVGLADSQPLVPPTSAENKSRNRRIEF 217
Query: 181 QIFP 184
Sbjct: 218 FYTS 221
>gi|70731289|ref|YP_261030.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
gi|68345588|gb|AAY93194.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 460
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 53/147 (36%), Gaps = 8/147 (5%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
N ++ Q+ + ++R +T L+ K L
Sbjct: 319 AANGFIAQTVQAMRVAPGPQMPEAYQALTRQAQRLTVNFR---FEEGSASLDNKARQDLN 375
Query: 98 LIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ L + + + + D+ L+S+ RA ++ L++ GV +R
Sbjct: 376 RVLDYLRQHGKMNRQVTLAGFGDAKNDPARAALLSKLRAMAVRRELVKSGVVFR---EIR 432
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
GF + P+ N GR N+R+E+ +
Sbjct: 433 GFGAELPVAANSADEGRIKNRRVEVWV 459
>gi|315185632|gb|EFU19400.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578]
Length = 1337
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 55/135 (40%), Gaps = 13/135 (9%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFL----EKKFL---PMLQLIATILNKFPSTVIAIQS 115
++V R GD + I ++ L ++ +++ + I K+ I I+
Sbjct: 1204 VLVIREGDKLKIKISSIHFPPNKADLILDESEEGRKNRAIIERLVQIFTKYRRYKIRIEG 1263
Query: 116 HTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
H + + + +S RA+ +K L+ G+ R I+ G ++PI + +
Sbjct: 1264 HAVNLSGTEREEREELVPLSLARAEAVKQALVAMGLDPGR-ITTAGMGGRFPIVPHTDEK 1322
Query: 171 GRQNNQRIEIQIFPR 185
R N+R+E +
Sbjct: 1323 NRWKNRRVEFILLKE 1337
>gi|311103960|ref|YP_003976813.1| peptidoglycan-associated lipoprotein [Achromobacter xylosoxidans
A8]
gi|310758649|gb|ADP14098.1| peptidoglycan-associated lipoprotein [Achromobacter xylosoxidans
A8]
Length = 166
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 1/114 (0%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
I + ++ +++ A L I I+ +TD G + NL
Sbjct: 51 NPQSILAQQRSVYFDFDSYTVSDQYRSLVETHAKYLASHQQQTIKIEGNTDERGGAEYNL 110
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ Q RAD ++ + S+ I F + P T ++ N+R +I
Sbjct: 111 ALGQRRADAVRRMMTLL-GVSDNQIETISFGKEKPKSTGTSEADFAENRRADIV 163
>gi|307718765|ref|YP_003874297.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
gi|306532490|gb|ADN02024.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
Length = 1337
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 55/135 (40%), Gaps = 13/135 (9%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFL----EKKFL---PMLQLIATILNKFPSTVIAIQS 115
++V R GD + I ++ L ++ +++ + I K+ I I+
Sbjct: 1204 VLVIREGDKLKIKISSIHFPPNKADLILDESEEGRKNRAIIERLVQIFTKYRRYKIRIEG 1263
Query: 116 HTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
H + + + +S RA+ +K L+ G+ R I+ G ++PI + +
Sbjct: 1264 HAVNLSGTEREEREELVPLSLARAEAVKQALVAMGLDPGR-ITTAGMGGRFPIVPHTDEK 1322
Query: 171 GRQNNQRIEIQIFPR 185
R N+R+E +
Sbjct: 1323 NRWKNRRVEFILLKE 1337
>gi|182436312|ref|YP_001824031.1| putative secreted protein [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178464828|dbj|BAG19348.1| putative secreted protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 219
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 17/194 (8%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED------------EFQ 55
+ TT+ G + + + T + + +
Sbjct: 25 VLIAGTTLLGASPSYADDGPSVPPGTEATSEPPVPVDPNDPDLKMPEGGTLAPGRVLDIV 84
Query: 56 MQLQDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
++D G R + L + IA + K +T +
Sbjct: 85 QVVEDLGGEERREDSNADIKFALQAEVLFGKDSAKLGSAANARIAAIAAEIKKQNATKVR 144
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+ TD++G+ + ++S++RAD + L + + +RG+ +YPI +N + GR
Sbjct: 145 VFGFTDNLGSAAHGDVLSKQRADAVHGVLSKELGA-TITYEIRGYGEQYPIASNSNEEGR 203
Query: 173 QNNQRIEIQIFPRG 186
+ N+R+E+ FPRG
Sbjct: 204 KKNRRVEVS-FPRG 216
>gi|73537739|ref|YP_298106.1| hypothetical protein Reut_B3905 [Ralstonia eutropha JMP134]
gi|72121076|gb|AAZ63262.1| OmpA/MotB [Ralstonia eutropha JMP134]
Length = 215
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 71/193 (36%), Gaps = 18/193 (9%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ L F++ + G A E ++ +R S E L +
Sbjct: 25 VVLGAFVLILL-GVIGAQMELTARLEKEAKQRQEEMQRRES----LEKALAAPLAAGRVT 79
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF---PSTVIAIQSHTDSIG 121
+ I + ++ L+ + +L+ +A L+ + ++ + TD
Sbjct: 80 LVNGRIGIN---GSVLFAINSDQLQPQGRDVLKSLAGPLSAYLRSRDEILMVSGFTDDQQ 136
Query: 122 TLKNN------LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ N +S +RA + LI G+ + S F + P+ +N + GR N
Sbjct: 137 VRERNRRFADNWELSAQRALTVTRALIDAGIPAASVFSAA-FGAEQPVTSNADEAGRARN 195
Query: 176 QRIEIQIFPRGNI 188
+R+EI PR ++
Sbjct: 196 RRVEIAPVPRVSM 208
>gi|27904776|ref|NP_777902.1| peptidoglycan-associated lipoprotein precursor [Buchnera aphidicola
str. Bp (Baizongia pistaciae)]
gi|46396115|sp|Q89AJ5|PAL_BUCBP RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
Precursor
gi|27904174|gb|AAO27007.1| peptidoglycan-associated lipoprotein precursor [Buchnera aphidicola
str. Bp (Baizongia pistaciae)]
Length = 173
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 67/181 (37%), Gaps = 15/181 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ K L L + ++TT S C + + + + ++ ++ + QL +
Sbjct: 6 IFKILTLLLPMITTFS-CSFPKNK-------------LNSNNVDTFYEQETNKSKQQLTN 51
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + K+ L +A L + I I+ HTDS
Sbjct: 52 FSEDNFDETLEKLKKGNTIYFPFNNHQVNSKYAKNLNDLAQFLCHHSNQKIMIEGHTDSR 111
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT K N+ + Q+RAD + ++ SN+ I+ + P+ + + N+R I
Sbjct: 112 GTNKYNMYLGQKRADSV-KLYLESKGVSNQQITTVSYGSSKPVAHGNKENSYSKNRRSVI 170
Query: 181 Q 181
Sbjct: 171 I 171
>gi|260914347|ref|ZP_05920816.1| outer membrane protein A [Pasteurella dagmatis ATCC 43325]
gi|260631448|gb|EEX49630.1| outer membrane protein A [Pasteurella dagmatis ATCC 43325]
Length = 341
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G +V + V+F + L+ + +L I + + S +A+ +TD
Sbjct: 206 GQGAMVVPEVISKKFTLNSDVTFAFDKANLKPEAQGVLDGIYGEIAQLQSASVAVAGYTD 265
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR---- 172
+G+ NL +SQ RAD + +YL+ + + + IS G P+ N D+ GR
Sbjct: 266 RLGSDAYNLKLSQRRADTVANYLVSK-GVAPQAISATGMGESSPVTGNKCDSVKGRKALI 324
Query: 173 ---QNNQRIEIQIFPRGN 187
+++R+EI + +GN
Sbjct: 325 ACLADDRRVEISV--KGN 340
>gi|170692926|ref|ZP_02884087.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170141924|gb|EDT10091.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 218
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 72/194 (37%), Gaps = 19/194 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+ + L F++ ++ G+ K+ + E+ L
Sbjct: 25 MM-SVLLGAFMLILVAVIGVQLELSNKLE-----QEVKQRQVETQRRKTLEEALAGPLAA 78
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF---PSTVIAIQSHT 117
+ + I+ + ++ L+ + +L+ +A L+ + ++ + T
Sbjct: 79 GRVTLVNGRIGIS---GNVLFALNSDQLQPQGRDLLKSLAGPLSAYLRASDQILMVSGFT 135
Query: 118 DSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
D + +N +S +RA + LI+ GV + + F P+ +N + G
Sbjct: 136 DDQRLREGNRRFADNWELSAQRALTVTRALIEAGVPAPSLFAAA-FGSGQPVSSNADEQG 194
Query: 172 RQNNQRIEIQIFPR 185
R N+R+EI PR
Sbjct: 195 RARNRRVEIAPVPR 208
>gi|17861366|gb|AAK61593.1| OmpA [Pasteurella multocida]
Length = 348
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 62/162 (38%), Gaps = 22/162 (13%)
Query: 45 SSLDKAEDEFQMQLQ----------DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
D +F+ + + V + + L+
Sbjct: 189 EYADGQYADFRPDIGSVTAGLSYRFGQSVYVPEVVSKTFTLNTDVTFGFDKADLKPAAQN 248
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+L I + + S +A+ +TD +G+ NL +SQ RAD + +YL+ + + IS
Sbjct: 249 VLDGIYGEIAQLKSASVAVAGYTDCLGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISA 307
Query: 155 RGFAYKYPIDTN--DTKVGR-------QNNQRIEIQIFPRGN 187
G P+ N D+ GR +++R+EI + +GN
Sbjct: 308 TGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAV--KGN 347
>gi|315609087|ref|ZP_07884056.1| OmpA family protein [Prevotella buccae ATCC 33574]
gi|315249157|gb|EFU29177.1| OmpA family protein [Prevotella buccae ATCC 33574]
Length = 755
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + L + +LN+ P+ I + +H D G+++ N +SQ R
Sbjct: 584 VLIDNIFYEFDKANLTPESTKALDELVKLLNENPNVTIELSAHCDYKGSMEYNKRLSQRR 643
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYP---------------------------IDTN 166
A+ + +YL+ + ++ G+ + P +D
Sbjct: 644 AEAVVAYLVG-HGIARDRLTPVGYGKERPKTIRRKVAAKYPWLKEGDVLTEDFIHHLDAG 702
Query: 167 DTKVGRQNNQRIEIQIF 183
+V Q N+R E +
Sbjct: 703 KQEVCNQLNRRTEFTVL 719
>gi|163781627|ref|ZP_02176627.1| flagellar motor protein MotB [Hydrogenivirga sp. 128-5-R1-1]
gi|159882847|gb|EDP76351.1| flagellar motor protein MotB [Hydrogenivirga sp. 128-5-R1-1]
Length = 235
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 9/145 (6%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIAT 101
+ L K + + +L GI + + + + + + + +
Sbjct: 89 AELKKEITKIKEELLSMGIEADYLVTGTCMKLRVNTNRLYPLGSEEPYPQAKELFLNMCS 148
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
L F S I + +TD++ N +S RA + I +S G+
Sbjct: 149 RLKPF-SLPITFEGYTDNMPISNPRFPSNWELSAMRAVSVLRLFIT-CGYPQELLSAVGY 206
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
+PI NDT R+ N+RIE I
Sbjct: 207 GEHHPIAPNDTPANRERNRRIEFCI 231
>gi|309973370|gb|ADO96571.1| Outer membrane protein P5 [Haemophilus influenzae R2846]
Length = 359
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L + +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 242 SDVTFAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 301
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 302 VANYFVAK-GVAADAISATGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAV 355
>gi|319897366|ref|YP_004135562.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3031]
gi|317432871|emb|CBY81237.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3031]
Length = 348
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I +++ S +A+ +TD IG+ + N+ +SQ+RAD
Sbjct: 231 SDVTFAFGKANLKPQAQATLDSIYGQMSQVKSAKVAVAGYTDRIGSDEFNVKLSQKRADS 290
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 291 VANYFVAK-GVAADAISATGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAV 344
>gi|282879247|ref|ZP_06287997.1| OmpA family protein [Prevotella buccalis ATCC 35310]
gi|281298640|gb|EFA91059.1| OmpA family protein [Prevotella buccalis ATCC 35310]
Length = 703
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 36/153 (23%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ I + L + L + +LN+ + I + +H D G+ + N ++Q
Sbjct: 529 VPVLIDNIFYDFDKATLRPESKQALDELVKLLNENGNVTIELSAHCDYKGSKEYNKQLAQ 588
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYP---------------------------ID 164
RA+ + YLI + +S G+ + P +D
Sbjct: 589 RRAESVVQYLIAG-GIAKDRLSPVGYGKEKPKVVRKKLTERYPWLKEDDVLTEAFIKKLD 647
Query: 165 TNDTKVGRQNNQRIEIQIF--------PRGNIK 189
++ Q N+R E ++ +GN+K
Sbjct: 648 PEKQEICNQLNRRTEFKVLRTTYGLFDEKGNLK 680
>gi|117619075|ref|YP_857151.1| sodium-type flagellar protein MotY [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560482|gb|ABK37430.1| sodium-type flagellar protein MotY [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 287
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
V + L L +I + S V+ I +++DS G N +S++
Sbjct: 173 IAFSVLTYDKNSDELSLASKRRLAMIGEYVKVDKSIDVVVIDAYSDSYGGRWPNQKLSEK 232
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
RAD IK + ISV G K I +N+T+ GR N+R+ I
Sbjct: 233 RADAIKKVFMDL-GIEPGKISVEGHGEKQHIASNETEDGRAKNRRVVI 279
>gi|258648579|ref|ZP_05736048.1| OmpA family protein [Prevotella tannerae ATCC 51259]
gi|260851358|gb|EEX71227.1| OmpA family protein [Prevotella tannerae ATCC 51259]
Length = 691
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I + + + L +A +L P I + S+ D GT N +S
Sbjct: 514 NIPVLVRNVFYQFDKAAITDSSKVALDRLAALLKDNPHITIELSSNCDYRGTDAYNDRLS 573
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYP-------------IDTNDT--------- 168
Q+RA+ + YLI +G+ + R ++ +G+ K P + DT
Sbjct: 574 QQRAENVVHYLISQGIPAAR-LTPKGYGKKNPKIVSKKLAETYTFLKEGDTLTTAYIMKL 632
Query: 169 -----KVGRQNNQRIEIQIF 183
++ N+R E ++
Sbjct: 633 PPKEQEICNALNRRTEFRVL 652
>gi|284038953|ref|YP_003388883.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283818246|gb|ADB40084.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 285
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 67 RIGDMITCYIPVHVSFVSEVF---LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
R I + P+ + F + + ++ T L P+ + I HTDS GT
Sbjct: 165 RHQKYIDLFHPLQLYFPTGSTEHIVTPDNEQFVREAITYLYNHPTERLTITGHTDSTGTE 224
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
NL +S+ RA V++ LI++ +S R+I V K PI N+ GR+ N+R+ + +
Sbjct: 225 AFNLKLSRLRAMVVRDKLIKQ-GASKRWIQVIAMGNKLPIAPNNLPEGREANRRVTLLVK 283
Query: 184 PR 185
R
Sbjct: 284 KR 285
>gi|134292796|ref|YP_001116532.1| hypothetical protein Bcep1808_4087 [Burkholderia vietnamiensis G4]
gi|134135953|gb|ABO57067.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
Length = 214
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 11/149 (7%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF- 106
+ + L I +V F + L+ +L+ +A L +
Sbjct: 59 QQRASLEQALAGPLAAGRVTLVNGRIGISGNVLFALNSDQLQPAGRDLLKTLAGPLAAYL 118
Query: 107 --PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
++ + D +N +S +RA + LI GV + + F
Sbjct: 119 KTRDEILMVSGFADDQQVRAGNRLFADNWELSAKRALTVTRALIDAGVPAPSVFAAA-FG 177
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ P+ +N GR N+R+EI PR +
Sbjct: 178 SQQPVSSNADDEGRAKNRRVEIAPVPRKS 206
>gi|1171900|sp|P45996|OMP53_HAEIN RecName: Full=Outer membrane protein P5; Short=OMP P5; AltName:
Full=Fimbrin; Flags: Precursor
gi|305373|gb|AAA24959.1| fimbrial protein [Haemophilus influenzae]
Length = 359
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L + +++ S +A+ +T+ IG+ N+ +SQERAD
Sbjct: 242 SDVTFAFGKANLKPQAQATLDSVYGEISQVKSRKVAVAGYTNRIGSDAFNVKLSQERADS 301
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 302 VANYFVAK-GVAADAISATGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAV 355
>gi|317503691|ref|ZP_07961708.1| OmpA family protein [Prevotella salivae DSM 15606]
gi|315665212|gb|EFV04862.1| OmpA family protein [Prevotella salivae DSM 15606]
Length = 683
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 51/137 (37%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I ++ L + L + +LN+ P I I +H D G+ + NL +SQ+R
Sbjct: 515 VLIDNIFYDFNKATLRPESTAALDDLVALLNENPHVTIEISAHCDYRGSAEYNLRLSQQR 574
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYP---------------------------IDTN 166
A+ + YLI + S ++ G+ + P ++
Sbjct: 575 AENVVRYLISK-GISADRLTAVGYGKQRPKVIRKKLTEKYTWLKEGDKLTSAFIEKLNKE 633
Query: 167 DTKVGRQNNQRIEIQIF 183
++ Q N+R E +
Sbjct: 634 QQEICNQLNRRTEFSVL 650
>gi|307719340|ref|YP_003874872.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
gi|306533065|gb|ADN02599.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
Length = 826
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 55/148 (37%), Gaps = 19/148 (12%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV--------FLEKKFLPMLQLIATILN 104
L T + V +P + ++ L L +A +L
Sbjct: 674 AKASALVVTDVYVVIKDGGAYISVPDIHFAPFTADYTDKVPPEIREENLRTLDEVAAMLK 733
Query: 105 KFPSTVIAIQSHTDS----------IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
KFP + ++ H S I + + +S+ RA+ ++ LI RGV +R +S+
Sbjct: 734 KFPQYTVQLEGHAVSLLWFDPERAKIEHQEVLIPLSRARAEAVRKALISRGVDPSR-LSI 792
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G+ PI R N+R+E +
Sbjct: 793 VGYGGSRPIVPFSDLKKRWVNRRVEFLL 820
>gi|208780419|ref|ZP_03247760.1| OmpA family protein [Francisella novicida FTG]
gi|208743787|gb|EDZ90090.1| OmpA family protein [Francisella novicida FTG]
Length = 201
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 58/194 (29%), Gaps = 25/194 (12%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ M ++ C + + K D SS + +L +
Sbjct: 3 LAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSS----QIYGSDKLSSDQVE- 57
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+++ + L A L P I + +TD G+ K
Sbjct: 58 QMKKELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPRGSEKY 117
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-------------ND----- 167
N + Q+RA+ + +YL+ + + I V + P ND
Sbjct: 118 NFNLGQKRAEAVYNYLLGK-NVNKDQICVVSYGKLKPAAEPTQFYDEFCKDGVNDACMYK 176
Query: 168 -TKVGRQNNQRIEI 180
++ ++R EI
Sbjct: 177 ASEKAFYLDRRTEI 190
>gi|330447940|ref|ZP_08311588.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492131|dbj|GAA06085.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 298
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + + L +A+ L + + I HTD++G+ NL IS+ RAD + S
Sbjct: 185 FNLGQRVVSSSQKQTLVDLASYLKHDKNIKRVLIDGHTDNVGSSVANLQISKVRADDVAS 244
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ-IFPRGNIKK 190
L + + + +R +YP+ N+T+ G+ N+R+ I+ I +K+
Sbjct: 245 ILREN-GVRSSLMEIRSHGSRYPVANNNTQQGKAKNRRVTIRAIRKEEAVKR 295
>gi|313828793|gb|EFS66507.1| OmpA family protein [Propionibacterium acnes HL063PA2]
Length = 115
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + ++ ++ A L S I + +TDS G+ +NL +S+ RA
Sbjct: 8 SVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDSSGSASHNLDLSRRRAAS 67
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L + ++ G P+ +ND++ GR+ N+R+ I +
Sbjct: 68 VAKVLGSQLSKGITLVTA-GKGEADPVTSNDSEAGRRLNRRVTITV 112
>gi|260911408|ref|ZP_05917999.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295]
gi|260634455|gb|EEX52554.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295]
Length = 686
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 58/152 (38%), Gaps = 36/152 (23%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + + L + L + +LN+ P+ I + +H D GT + N ++Q R
Sbjct: 516 VLIDNIFYDLDKYTLRPESKQALDELVKLLNENPNVTIELSAHCDYRGTPEYNKTLAQHR 575
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYP---------------------------IDTN 166
A+ + YLI+ + + ++ G+ + P +D +
Sbjct: 576 ANAVVHYLIEA-GIAPQRLTPMGYGKEKPKTIRKKLTERYKWLKEGDVLTEDFITKLDKD 634
Query: 167 DTKVGRQNNQRIEIQIFP--------RGNIKK 190
++ Q N+R E + +GN+KK
Sbjct: 635 KQEICNQLNRRTEFVVQRTTYGLLDDKGNLKK 666
>gi|37704644|gb|AAR01594.1| OprF [Pseudomonas sp. MFY107]
Length = 316
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 209 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGH 268
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L + + + G+ P+
Sbjct: 269 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESARVQSVGYGESRPVA 316
>gi|171061026|ref|YP_001793375.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170778471|gb|ACB36610.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 558
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 62/162 (38%), Gaps = 6/162 (3%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
++ G D +E R + V++ FV+
Sbjct: 381 AASDEAQRIADAQGFIGQLPDASEPGAAAVAVADLPPAYRALTDGGRRLSVNLRFVAGAE 440
Query: 88 -LEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L+ K + I +L + + + +D++G N +SQ+RA + + L
Sbjct: 441 GLDNKARRDMGRIVRLLERRLKQDERVMLLGFSDALGGDCANQRLSQQRATAVATELATY 500
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
GV R V GF PI +N+T GR+ N+R+E+ + +
Sbjct: 501 GV---RPAVVHGFGSAAPIASNETGAGRERNRRVEVWLTSKA 539
>gi|37704652|gb|AAR01598.1| OprF [Pseudomonas sp. MFY140]
Length = 320
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 40/108 (37%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 213 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGH 272
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ A+ +K L + + G+ P+
Sbjct: 273 TDSVGPDAYNQKLSERLANAVKQVLTNQYGVEASRVQSVGYGESRPVA 320
>gi|159163741|pdb|2AIZ|P Chain P, Solution Structure Of Peptidoglycan Associated Lipoprotein
From Haemophilus Influenza Bound To
Udp-N-Acetylmuramoyl-L-
Alanyl-D-Glutamyl-Meso-2,6-Diaminopimeloyl-D-Alanyl-D-
Alanine
Length = 134
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + + +++ +L A LN P+ + ++ +TD GT + N+ + Q
Sbjct: 25 LQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQ 84
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
RAD +K YL +GV + + +V + + P + N+R
Sbjct: 85 RRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 129
>gi|110679377|ref|YP_682384.1| peptidoglycan-associated lipoprotein, putative [Roseobacter
denitrificans OCh 114]
gi|109455493|gb|ABG31698.1| peptidoglycan-associated lipoprotein, putative [Roseobacter
denitrificans OCh 114]
Length = 170
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ V E + L+ A L I+ H D GT + N+ + RA+
Sbjct: 60 DRVLFAVDESSINPAGQTTLEGQAQWLLANTDYTAVIEGHADEQGTREYNVALGARRANA 119
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++ YLI RGV+ NR +V + + PI+ ++ N+R +
Sbjct: 120 VREYLISRGVAGNRLQTVS-YGKERPIEICSSEECYAKNRRAVTVLAS 166
>gi|313500575|gb|ADR61941.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 162
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 4/141 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATIL 103
+ E L+ G + G + V F S+ L + +++ I L
Sbjct: 24 APPKGLTPEQIAVLKREGFTPTDEGW--AYDLSGKVLFGSDLDSLNGQSQAIVERIGKAL 81
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + H DS G N +S+ RA + + + I RG P+
Sbjct: 82 LGVGIQGVRVDGHADSSGKAAYNQQLSERRAQSVTK-ALVGVGMQAQNIQSRGLGSSQPV 140
Query: 164 DTNDTKVGRQNNQRIEIQIFP 184
N T GR N+R+ I +
Sbjct: 141 ADNRTSAGRTENRRVSIVVAS 161
>gi|299138485|ref|ZP_07031664.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
gi|298599731|gb|EFI55890.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
Length = 256
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 38/108 (35%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ L + A+ LN P+ + I + D G+ + N+ + + RA
Sbjct: 148 NVQDLFYDYDSFDLRPDAQSSVMHAASYLNAHPAIKVLIGGYCDDRGSAEYNITLGENRA 207
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + S + V + + T + + Q N+R + +
Sbjct: 208 NAA-KTALVSAGVSANRLRVVSYGKEKQFCTEENESCWQQNRRAQFTL 254
>gi|126173969|ref|YP_001050118.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|153000261|ref|YP_001365942.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
gi|160874894|ref|YP_001554210.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|217973710|ref|YP_002358461.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
gi|304409838|ref|ZP_07391458.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307304194|ref|ZP_07583947.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|125997174|gb|ABN61249.1| OmpA/MotB domain protein [Shewanella baltica OS155]
gi|151364879|gb|ABS07879.1| OmpA/MotB domain protein [Shewanella baltica OS185]
gi|160860416|gb|ABX48950.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|217498845|gb|ACK47038.1| OmpA/MotB domain protein [Shewanella baltica OS223]
gi|304352356|gb|EFM16754.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306913092|gb|EFN43515.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|315267131|gb|ADT93984.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 289
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V L + L + L P + + ++TDS G N +S +
Sbjct: 177 IAFTVLNYDEGGTDLTRFSQQQLSRVQEYLAYDPLVELVLVDAYTDSYGGRSVNQKVSDK 236
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ +K + + G+ +R ++V G + + +ND R N+R+ I+I
Sbjct: 237 RAESVKDFFVASGIPQDRIVTV-GHGERRHVASNDDMDERARNRRVVIRI 285
>gi|172063966|ref|YP_001811617.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171996483|gb|ACB67401.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 170
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 15/185 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K + I G + + + + + L+
Sbjct: 1 MMKSSL-PVSIGRLCVGSAVLLCLLLGGCKTPPLHRGLTHTQVTA------------LKS 47
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G + G P + L+ +++ I L + + ++D
Sbjct: 48 AGFQETGQGFEFGSSGP-ILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDE 106
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT+ + +S+ RA+V+ L+ + ++V G P+ N T GR N+R I
Sbjct: 107 GTVAYDRELSRRRAEVVAIELVD-VGLDGKRVAVIGKGKSDPVGDNRTPTGRAQNRRAAI 165
Query: 181 QIFPR 185
+ PR
Sbjct: 166 VVSPR 170
>gi|308050039|ref|YP_003913605.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307632229|gb|ADN76531.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 296
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLKNNLL 128
+T + L + L IA + P T + + HTD++G NL
Sbjct: 175 RHVTLSYRSGQLLPNTAQLNQ-----LSDIAAYVAADPRITEVLVDGHTDNVGDHLANLA 229
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+S++RAD + + L+ S I VRG +YP+ +N+ GRQ+N+R+ I++ G +
Sbjct: 230 LSRDRADEVGA-LLHERGISRDRIQVRGHGERYPLLSNNNAQGRQHNRRVTIRLVRDGQV 288
Query: 189 KK 190
++
Sbjct: 289 QE 290
>gi|187925731|ref|YP_001897373.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
gi|187716925|gb|ACD18149.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 584
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 10/148 (6%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
V + ++ V + + V + + + L+
Sbjct: 440 AVADANENFRSAIKNLLAPDSSCAAADVVK-----VLNLQVINFASASAHVPASAVDDLK 494
Query: 98 LIATILNKF----PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
A +LN + + + ++D++G + NL +S++RA+ + + + +
Sbjct: 495 QSARVLNACAGNGKTARLEVAGYSDNVGGEQANLQLSKQRANAV-RAYLVKTGVPADSLL 553
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+G+ P+ +NDT GR N+RIE
Sbjct: 554 AQGYGQARPVASNDTASGRFANRRIEFV 581
>gi|86157810|ref|YP_464595.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85774321|gb|ABC81158.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 259
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 7/126 (5%)
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI- 120
+ V G +T + F + L + L ML IA L + + ++ HTD
Sbjct: 119 VSVLVEGRRLTVRLAATEFFDPGQAALRPQALAMLDAIAAELVPL-ARPLRVEGHTDETP 177
Query: 121 ----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
G +N +S RA + YL Q + +S G +P+ T+ T + N+
Sbjct: 178 VGGGGRWISNWELSAARAATVVGYLEQAHAARPAGLSAVGLGSAHPLSTDATPEAHERNR 237
Query: 177 RIEIQI 182
R+E+ +
Sbjct: 238 RVELVL 243
>gi|313610144|gb|EFR85455.1| chemotaxis protein MotB [Listeria monocytogenes FSL F2-208]
Length = 170
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 52/151 (34%), Gaps = 7/151 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
++ + + + + T + + + I + F L + + I
Sbjct: 10 EKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAKEI 69
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE------RADVIKSYLIQRGVSSNRFIS 153
+ + T+ I S + ++ S + +++ + + + S
Sbjct: 70 GELFXQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFS 129
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RG+ P+ ND R+ N+R+EI + P
Sbjct: 130 ARGYGEFRPVAKNDIAANREKNRRVEIMVRP 160
>gi|254440083|ref|ZP_05053577.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198255529|gb|EDY79843.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 720
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLIS 130
S V L+ + + +A ++ + I HTDS G N +S
Sbjct: 601 ILERGQIEFLSSSVRLDATSIRTINALAAVILPCVAADLTLDIGGHTDSSGDEPTNKALS 660
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
Q+RA+ +++ LI R + ++ GF PI N+T GR N+R +I F +G ++
Sbjct: 661 QDRANAVRAALIAR-GVPDVAMTAFGFGQTQPIADNETPEGRAANRRTDITWFAQGALR 718
>gi|289433964|ref|YP_003463836.1| chemotaxis protein MotB [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|315301919|ref|ZP_07872930.1| chemotaxis protein MotB [Listeria ivanovii FSL F6-596]
gi|289170208|emb|CBH26748.1| chemotaxis protein MotB [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|313629715|gb|EFR97837.1| chemotaxis protein MotB [Listeria ivanovii FSL F6-596]
gi|313634398|gb|EFS00987.1| chemotaxis protein MotB [Listeria seeligeri FSL N1-067]
Length = 275
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 52/151 (34%), Gaps = 7/151 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
++ + + + Q + T + + + I + F L + + I
Sbjct: 115 EKIEAFKKQIDSYIQAEKLGTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAKEI 174
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE------RADVIKSYLIQRGVSSNRFIS 153
+ + T+ I S + + S + +++ + + + S
Sbjct: 175 GDLFAQGKGTMEGIVSGHTDNVPISTSTYSSNWELSVARAVNFMEAIIQENNEVNPGEFS 234
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RG+ P+ ND R+ N+R+EI + P
Sbjct: 235 ARGYGEFKPVAKNDVATNREKNRRVEIMVRP 265
>gi|327313465|ref|YP_004328902.1| OmpA family protein [Prevotella denticola F0289]
gi|326946064|gb|AEA21949.1| OmpA family protein [Prevotella denticola F0289]
Length = 697
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 62/166 (37%), Gaps = 28/166 (16%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ ++ + ++ + G + I + L + L + +L
Sbjct: 497 NHKEEIKVSPVEASKEHTLQFPLAGLHVPVLIDNIFYDFDKATLRPESEKALNELVKLLE 556
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP-- 162
+ P+ I + +HTD IG+ + N +SQ RAD + +YL G+ +R ++ G+ + P
Sbjct: 557 ENPNVTIELSAHTDYIGSAEYNKRLSQRRADAVVAYLTSHGIVRDR-LTPVGYGKERPKK 615
Query: 163 -----------IDTND--TKV------------GRQNNQRIEIQIF 183
+ ND T+ Q N+R E +
Sbjct: 616 IRRKLTEKYPWLKENDILTEDFIKKLDKEKQEIANQLNRRTEFTVL 661
>gi|325860329|ref|ZP_08173451.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
gi|325482208|gb|EGC85219.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
Length = 697
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 62/166 (37%), Gaps = 28/166 (16%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ ++ + ++ + G + I + L + L + +L
Sbjct: 497 NHKEEIKVSPVEASKEHTLQFPLAGLHVPVLIDNIFYDFDKATLRPESEKALNELVKLLE 556
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP-- 162
+ P+ I + +HTD IG+ + N +SQ RAD + +YL G+ +R ++ G+ + P
Sbjct: 557 ENPNVTIELSAHTDYIGSAEYNKRLSQRRADAVVAYLTSHGIVRDR-LTPVGYGKERPKK 615
Query: 163 -----------IDTND--TKV------------GRQNNQRIEIQIF 183
+ ND T+ Q N+R E +
Sbjct: 616 IRRKLTEKYPWLKENDILTEDFIKKLDKEKQEIANQLNRRTEFTVL 661
>gi|281423524|ref|ZP_06254437.1| OmpA family protein [Prevotella oris F0302]
gi|281402344|gb|EFB33175.1| OmpA family protein [Prevotella oris F0302]
Length = 683
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 51/137 (37%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I ++ L + L + T+LN+ P I + +H D G+ + NL +SQ+R
Sbjct: 515 VLIDNIFYDFNKATLRPESTAALDELVTLLNENPHVTIELAAHCDYRGSAEYNLRLSQQR 574
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYP---------------------------IDTN 166
A+ + YLI + + ++ G+ + P +D
Sbjct: 575 AENVVRYLISK-GIATDRLTAVGYGKQRPKTIRKKLTEKYTWLKEGDQLTPAFIEKLDKE 633
Query: 167 DTKVGRQNNQRIEIQIF 183
+ Q N+R E +
Sbjct: 634 QQETCNQLNRRTEFSVL 650
>gi|213646608|ref|ZP_03376661.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
Length = 358
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 231 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 346
>gi|213161917|ref|ZP_03347627.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213425902|ref|ZP_03358652.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213622699|ref|ZP_03375482.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|289826790|ref|ZP_06545725.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
Length = 369
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 242 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 302 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 357
>gi|194450606|ref|YP_002045072.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|197265555|ref|ZP_03165629.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|194408910|gb|ACF69129.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|197243810|gb|EDY26430.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|321223685|gb|EFX48748.1| Outer membrane protein A precursor [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|326622756|gb|EGE29101.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 358
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 231 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 346
>gi|194443312|ref|YP_002040273.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|200390100|ref|ZP_03216711.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205357270|ref|ZP_02346426.2| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|194401975|gb|ACF62197.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|199602545|gb|EDZ01091.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205322778|gb|EDZ10617.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 358
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 231 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 346
>gi|168233443|ref|ZP_02658501.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194472870|ref|ZP_03078854.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197248715|ref|YP_002145940.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|194459234|gb|EDX48073.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197212418|gb|ACH49815.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205332492|gb|EDZ19256.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 371
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 244 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 304 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 359
>gi|168243859|ref|ZP_02668791.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|198244081|ref|YP_002215003.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|197938597|gb|ACH75930.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205337186|gb|EDZ23950.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|312912061|dbj|BAJ36035.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|323129338|gb|ADX16768.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326627270|gb|EGE33613.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 369
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 242 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 302 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 357
>gi|161614736|ref|YP_001588701.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168821824|ref|ZP_02833824.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|238911107|ref|ZP_04654944.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|161364100|gb|ABX67868.1| hypothetical protein SPAB_02488 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|205341689|gb|EDZ28453.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320085284|emb|CBY95068.1| Outer membrane protein A Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 369
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 242 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 302 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 357
>gi|56413933|ref|YP_151008.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362856|ref|YP_002142493.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56128190|gb|AAV77696.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094333|emb|CAR59845.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 350
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 223 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 283 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 338
>gi|16759951|ref|NP_455568.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142277|ref|NP_805619.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|68052784|sp|Q8Z7S0|OMPA_SALTI RecName: Full=Outer membrane protein A; Flags: Precursor
gi|25298549|pir||AI0626 outer membrane protein A STY1091 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502245|emb|CAD08196.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137907|gb|AAO69468.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 350
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 223 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 283 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 338
>gi|16764429|ref|NP_460044.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|205352225|ref|YP_002226026.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856415|ref|YP_002243066.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|20141670|sp|P02936|OMPA_SALTY RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane major heat-modifiable protein; AltName:
Full=Outer membrane protein 33K; Flags: Precursor
gi|16419585|gb|AAL20003.1| putative membrane component hydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|146760785|gb|ABQ44512.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|205272006|emb|CAR36850.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708218|emb|CAR32518.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261246287|emb|CBG24095.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992822|gb|ACY87707.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157614|emb|CBW17106.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|332987964|gb|AEF06947.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 350
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 223 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 283 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 338
>gi|319781002|ref|YP_004140478.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166890|gb|ADV10428.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 343
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + + ++ +A + + P +
Sbjct: 205 EILADRENIRIVGDRFVFQ-SEVLFPTGSEVINDAGKVEMKKLADAIIELQKEIPPEINW 263
Query: 110 VIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S R+ + +LI+ GV +NR ++ GF P+D
Sbjct: 264 VLRVDGHTDNKPLSGTGRYRDNWELSTARSTSVVKFLIENGVPANRLVAA-GFGEFQPLD 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
DT+ R N+RIE+++ R
Sbjct: 323 PADTEEARNKNRRIELKLTER 343
>gi|269219690|ref|ZP_06163544.1| OmpA family protein [Actinomyces sp. oral taxon 848 str. F0332]
gi|269210932|gb|EEZ77272.1| OmpA family protein [Actinomyces sp. oral taxon 848 str. F0332]
Length = 212
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 8/129 (6%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
V G T V L + +L + + K I+I HTD
Sbjct: 84 DGAETTVEGEGKTTTTLSSDVNFEVDSANLTPRAREVLDGLVSKWRKKKPKEISITGHTD 143
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND------TKVGR 172
S+ +N +S++RA ++SY+ + + I V G K P + + G+
Sbjct: 144 SVADDDHNQKLSEDRAKAVRSYVAPKVSGVS--IEVEGKGEKEPAASETNEDGSPNEAGK 201
Query: 173 QNNQRIEIQ 181
N+R+ I
Sbjct: 202 AANRRVVIV 210
>gi|254294751|ref|YP_003060774.1| peptidoglycan-associated lipoprotein [Hirschia baltica ATCC 49814]
gi|254043282|gb|ACT60077.1| peptidoglycan-associated lipoprotein [Hirschia baltica ATCC 49814]
Length = 181
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 56/171 (32%), Gaps = 10/171 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L+ SGC E V T + + + I
Sbjct: 9 ALTFSAAALASGCASTVEEPAPVPTPTPVATPAPVPTPTPT--------PVVVPQGPIPG 60
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
S + V + L+ +L A LN +P I I + D GT +
Sbjct: 61 SLEDFNVNVG-SKIFYDVDQYSLDDADRQVLARQAAWLNTYPGVSILIAGNCDERGTREY 119
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
N+ + + RA K YL+ GVS+ R +V + + P D T N+
Sbjct: 120 NIALGERRAAAAKDYLMGLGVSAARIETVS-YGKERPTDPRSTTEAWSVNR 169
>gi|58582662|ref|YP_201678.1| hypothetical protein XOO3039 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58427256|gb|AAW76293.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 438
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 9/153 (5%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM--ITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+++ + + + V GD + L+ +L+
Sbjct: 287 AAVRAATIPALAPLLAAEQRAGLLTVHTDGDGRSTVRLASASMFPSGSAELDADQTHLLE 346
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFIS 153
+A L + P + + HTD S RA+ + + L R +
Sbjct: 347 RVAAALEQVPG-RVVVVGHTDDQPVRSLRFKDNFALSARRAESVGAVLAAGLRDR-RRVQ 404
Query: 154 VRGFAYKYPID-TNDTKVGRQNNQRIEIQIFPR 185
G PI R N+R+EI + P
Sbjct: 405 TSGAGDSQPIALPPQLPGNRARNRRVEILLIPE 437
>gi|325287507|ref|YP_004263297.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324322961|gb|ADY30426.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 393
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 66/172 (38%), Gaps = 11/172 (6%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ-----MQLQDTGIVVSRIGDMITCY 75
+++ + + + + L K ++ + +
Sbjct: 220 KEQQRVADSIAAAKKQEEEARLLAERLKKEQEALRLAEVEKEKAAAEKQRREDLQAKINS 279
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
++ +L+ + L IA +L + P+ + + ++TDS GT K NL +SQ R
Sbjct: 280 FGSINFALNSSYLDSRTKKTLNSIAELLQENPTVTVKLGAYTDSRGTDKYNLWLSQRRMQ 339
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQI 182
+L+ + S+ ++ F + ++ + T+ + N+RIEI +
Sbjct: 340 RSLDFLVSK-GVSSEKVNATAFGEEELLNNCEDGVYCTEQEHKINRRIEITV 390
>gi|315634557|ref|ZP_07889842.1| outer membrane protein P5 [Aggregatibacter segnis ATCC 33393]
gi|315476784|gb|EFU67531.1| outer membrane protein P5 [Aggregatibacter segnis ATCC 33393]
Length = 354
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
Q +V + + + L+ + +L I + + S + + +TD
Sbjct: 219 QGAPVVAPEVVNKTFNLNSDVTFAFGKADLKPQAQGVLDGIYGEIAQVKSANVKVAGYTD 278
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR---- 172
IG+ N +SQ+RA+ + +YL+ + S IS G+ P+ N GR
Sbjct: 279 RIGSDAYNQKLSQKRAETVANYLVAK-GVSQNAISATGYGKANPVTGNKCDAVKGRKALI 337
Query: 173 ---QNNQRIEIQI 182
+++R+EI +
Sbjct: 338 ACLADDRRVEIAV 350
>gi|195874240|ref|ZP_02701347.2| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195630051|gb|EDX48703.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 358
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 231 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 346
>gi|171060730|ref|YP_001793079.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170778175|gb|ACB36314.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 200
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 54/179 (30%), Gaps = 10/179 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ-MQLQDTGIV 64
L++ ++ ++ + + N +V + +
Sbjct: 25 ALALLGAGVLAAQAQSAADTTVLRGQDVNPDKLVELLTPDPEPVLTRGLKVDREASLPAA 84
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGT 122
V R + + L L +A L + ++ H D G
Sbjct: 85 VRRPSASLLIT-----FETNSARLTPSSRQQLDTVAAALKSNQLQAYGFNLEGHADPRGQ 139
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N +SQ RA+ ++ YL+ ++ G P++T D N+R+ I
Sbjct: 140 ASTNRQLSQMRAESVRDYLVATHGIPVDRLAPIGKGDTEPLNTRDVAA--PENRRVTIV 196
>gi|323700324|ref|ZP_08112236.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323460256|gb|EGB16121.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 174
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Query: 80 VSFVSEVFLE-KKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + ++ L + L + I HTDS+G+ NL +S++RA
Sbjct: 69 YFATNSAVITGEQSFRQLDELGRALTSSALRGARMEIGGHTDSVGSDAYNLQLSRKRAQA 128
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ YL ++ + +V G+ P+ +N+T GR N+R+ I
Sbjct: 129 VSDYLNKKYGFTA--AAVTGYGESAPVASNETAEGRAGNRRVVIT 171
>gi|77361038|ref|YP_340613.1| component of sodium-driven polar flagellar motor [Pseudoalteromonas
haloplanktis TAC125]
gi|76875949|emb|CAI87171.1| putative Component of sodium-driven polar flagellar motor
[Pseudoalteromonas haloplanktis TAC125]
Length = 292
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V + L K L IA L PS I I S+TDS G NNL +S+
Sbjct: 181 ISFTVMNYQSNSSKLTKSSQQRLDKIAEYLKNDPSIESINIASYTDSYGGRWNNLDLSKT 240
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA IK Y+I + G K +DTNDT +GR N+R+ IQI
Sbjct: 241 RAKAIKDYMISL-GVDETKVHTDGLGEKRFVDTNDTILGRNKNRRLVIQI 289
>gi|110635517|ref|YP_675725.1| hypothetical protein Meso_3188 [Mesorhizobium sp. BNC1]
gi|110286501|gb|ABG64560.1| OmpA/MotB [Chelativorans sp. BNC1]
Length = 343
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + + ++ +A + + P +
Sbjct: 205 EILSDREDIRIVGDRFVFQ-SEVLFASGATEINPNGQEEMRKLAGAILELQREIPPEINW 263
Query: 110 VIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+I G ++N +S RA + +LI+ GV + R ++ GF P+D
Sbjct: 264 VLRVDGHTDNIPLSGTGRFRDNWELSTARAVAVVKFLIESGVPAERLVAA-GFGEFQPLD 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
+T R N+RIE+++ R
Sbjct: 323 PENTTEARSRNRRIELKLTER 343
>gi|146338211|ref|YP_001203259.1| hypothetical protein BRADO1110 [Bradyrhizobium sp. ORS278]
gi|146191017|emb|CAL75022.1| Putative flagellar motor protein MotB [Bradyrhizobium sp. ORS278]
Length = 342
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 13/140 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
+ + +GD + L + L +AT L + P S
Sbjct: 205 AILGNRPDIRVVGDRFVFQ-SEVFFDTGQATLLPEGQQELNSVATALIDLDKQIPAEISW 263
Query: 110 VIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
V+ + HTD + K+N +S RA + YLI GV + R ++ GFA P+DT
Sbjct: 264 VLRVDGHTDVRPINSPVFKSNWELSSARAISVVQYLISLGVPAQRLVAA-GFAEFQPLDT 322
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
+T + N+RIE+++ R
Sbjct: 323 ANTDEAFRRNRRIELKLTER 342
>gi|170727083|ref|YP_001761109.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169812430|gb|ACA87014.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 289
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V L + + + L+ P + I ++TDS G N IS+E
Sbjct: 177 IAFTVLTYEFGGKELTRYAKAQIAKVQEYLSYDPEVELVLIDAYTDSYGGRSINQKISEE 236
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RAD +K + I G++ R +V G ++ + +N T R N+R+ I+I
Sbjct: 237 RADSVKEFFISAGITQERIHTV-GHGERHHVASNATIDERARNRRVVIRIT 286
>gi|317178824|dbj|BAJ56612.1| flagellar motor protein MotB [Helicobacter pylori F30]
Length = 255
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 73/209 (34%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD + K++ ++ RA + LI + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDMPLTKTRFKSHYELAANRAYRVMKVLI-QYGVNPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|238022763|ref|ZP_04603189.1| hypothetical protein GCWU000324_02674 [Kingella oralis ATCC 51147]
gi|237865966|gb|EEP67102.1| hypothetical protein GCWU000324_02674 [Kingella oralis ATCC 51147]
Length = 230
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 32/212 (15%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-----SLDKAEDEFQ 55
M K++ LS I+ ++ G A + ++V +G LDKA +
Sbjct: 1 MTKQIKLSALIVALMASTG-AMAHSVHGYTTSQGSGEVVRNNYGECWENTYLDKATNGLV 59
Query: 56 M----QLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTV 110
V T + F + L + + L ++ L++
Sbjct: 60 ECGDKAPDAPAPQVVTEQAHETISLQSEFLFGFDKYNLRPEAITTLNDLSAKLSQSNVQS 119
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ ++ +TD +G+ K N +S+ RA+ + +YL+Q+GV ++R IS G T +
Sbjct: 120 VRVEGNTDFMGSDKYNQALSERRANTVANYLVQQGVPADR-ISAVGLGETQAKMTEQCQA 178
Query: 171 GRQN--------------------NQRIEIQI 182
++R++IQ+
Sbjct: 179 EVAKLGKKVSKAKKRSALIACIEPDRRVDIQV 210
>gi|150024426|ref|YP_001295252.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
JIP02/86]
gi|150025241|ref|YP_001296067.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
JIP02/86]
gi|149770967|emb|CAL42434.1| Probable outer membrane protein, OmpA family [Flavobacterium
psychrophilum JIP02/86]
gi|149771782|emb|CAL43256.1| Probable outer membrane protein, OmpA family [Flavobacterium
psychrophilum JIP02/86]
Length = 644
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Query: 60 DTGIVVSRIGDMIT--CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
I V ++G I I + +++ + K L I T+LN P+ I I+SHT
Sbjct: 513 AKKIRVIKVGSDIAKALSIKMIYFDLNKSVIRKDASVELAKILTVLNLNPTIKIDIRSHT 572
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-----NDTKVGR 172
DS T N+ +S RA +L+Q+ S ++ RG+ ++ N T
Sbjct: 573 DSRQTAAYNMSLSDRRAKSTIEWLVQK-GISPDRLTGRGYGESQLVNECSDGVNCTGEQH 631
Query: 173 QNNQRIEIQIFP 184
Q N+R E I
Sbjct: 632 QLNRRSEFIIIS 643
>gi|91975364|ref|YP_568023.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91681820|gb|ABE38122.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 464
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Query: 49 KAEDEFQMQLQDTGI--VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + ++ + + V + + ++K +L + +
Sbjct: 329 TVKADLSVKPAASPVDATVCQQLFNDLLGKSTVRFDSASASIDKDSAGLLDRLIETAMRC 388
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
P I + HTDS G +N +S+ RA + Y++ R S G+ K P++ N
Sbjct: 389 PGAAIEVAGHTDSAGEAGSNQALSERRARAVVDYMV-RAGLSPERFRAFGYGSKIPLEGN 447
Query: 167 DTKVGRQNNQRIEIQI 182
+T G+ N+RI+ I
Sbjct: 448 ETDAGKAKNRRIDFMI 463
>gi|37704604|gb|AAR01574.1| OprF [Pseudomonas sp. MFY32]
Length = 316
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 209 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGH 268
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L + + + G+ P+
Sbjct: 269 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESARVQSVGYGESRPVA 316
>gi|37704602|gb|AAR01573.1| OprF [Pseudomonas sp. MFY31]
Length = 316
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 209 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGH 268
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L + + + G+ P+
Sbjct: 269 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESARVQSVGYGESRPVA 316
>gi|319954672|ref|YP_004165939.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319423332|gb|ADV50441.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 638
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 5/126 (3%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + + + + + + L+ + +L +FP+ I I+SHTD+ G
Sbjct: 513 IVKDNGVEKIKVEPIYFDYDKYDITVRAEIELEKVLFVLREFPAIKIKIESHTDARGKDA 572
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIE 179
NL +S RA + YLI +G+ +NR S G+ + ++ N+R +
Sbjct: 573 YNLKLSDNRAKATRDYLILKGIVANRIESANGYGEYQLKNECSNGVSCSEQKHLINRRSD 632
Query: 180 IQIFPR 185
I +
Sbjct: 633 FIIISK 638
>gi|188581568|ref|YP_001925013.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
gi|179345066|gb|ACB80478.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
Length = 337
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 13/140 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---T 109
Q+ + V +GD + L+ + P L IA + + P+
Sbjct: 200 QIIGSRTDVRIVGDRFVLQ-SEVLFAAGSAALKPEAGPELDRIAGAILDIAKEIPADIPW 258
Query: 110 VIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
V+ + HTD+ +N +S RA + YL +G+ R + F P+D+
Sbjct: 259 VLRVDGHTDARPIQSAQFPSNWALSAARAIAVVQYLRTKGIPPQRLL-AGAFGEFQPLDS 317
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
++ N+RIE+++ R
Sbjct: 318 GTSEDAYARNRRIEMKLTER 337
>gi|170769190|ref|ZP_02903643.1| outer membrane protein A [Escherichia albertii TW07627]
gi|170121842|gb|EDS90773.1| outer membrane protein A [Escherichia albertii TW07627]
Length = 358
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 231 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 346
>gi|114769425|ref|ZP_01447051.1| flagellar motor protein [alpha proteobacterium HTCC2255]
gi|114550342|gb|EAU53223.1| flagellar motor protein [alpha proteobacterium HTCC2255]
Length = 638
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 15/162 (9%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
K + + + ++ V +GD + V +L + +
Sbjct: 479 ADEAKDLKKFRSEFFGKLREVMEGKE-GVRIVGDRFVFS-SEVLFSVGSAYLGSRGKTEI 536
Query: 97 QLIATILNKFPS-------TVIAIQSHTDSIGT------LKNNLLISQERADVIKSYLIQ 143
+A I+N+ ++ + HTD I K+N +SQ RA + YL+
Sbjct: 537 SKVADIINQIADEIPTGIDWILRVDGHTDRIPFSGFGNDYKDNWELSQARALSVVRYLMD 596
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ GF PID DT + N+RIE++ +
Sbjct: 597 DLDIPANRLAANGFGEFQPIDNRDTPEAYKTNRRIELKFTEK 638
>gi|167624709|ref|YP_001675003.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167354731|gb|ABZ77344.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 321
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
K + E T I VS+ ++ F S + + L + +
Sbjct: 194 KKKVELLDATSTTAITVSK---PVSISAKSLFGFDSSKLVATEA---LAEVLKNVIASKD 247
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
T I I ++TDS+G + NL +S++RA+ +SY I GV +R I V P+ TN T
Sbjct: 248 TEICITAYTDSLGAKEYNLTLSKQRAEATRSYFISNGVEPSR-IHVDWKGEASPVATNRT 306
Query: 169 KVGRQNNQRIEIQI 182
GR N+R++I++
Sbjct: 307 AEGRALNRRVKIEL 320
>gi|237751470|ref|ZP_04581950.1| lipoprotein [Helicobacter bilis ATCC 43879]
gi|229372836|gb|EEO23227.1| lipoprotein [Helicobacter bilis ATCC 43879]
Length = 170
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 44/145 (30%), Gaps = 2/145 (1%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC-YIPVHVSFVSEVFLEKKFLPML 96
N + + + + + GD I + + +
Sbjct: 25 ADNNAGENGMSGNSNGDTEEEYAGNNEGTAYGDAIKVDSLTTIYFDFDRYDIRSDMKDYV 84
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ A + + + +Q +TD G + N + +RA ++ L+ + S
Sbjct: 85 RANADFIKEKNIKAVVLQGNTDEFGGDEYNTALGLKRAISVRDALVLQ-GLPRNMFSTIS 143
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ P+ T N+R +I
Sbjct: 144 YGMHKPVCREKTAECYAKNRRTDIV 168
>gi|254473145|ref|ZP_05086543.1| OmpA/MotB [Pseudovibrio sp. JE062]
gi|211957866|gb|EEA93068.1| OmpA/MotB [Pseudovibrio sp. JE062]
Length = 344
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 15/161 (9%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + L + +GD + + + + L
Sbjct: 187 AQRVQELSRYRSDFFGRLREILAQRS-DIEVVGDRFVFQ-SEVLFSSGDEEVNPQGRNQL 244
Query: 97 QLIATILNKFP-------STVIAIQSHTD-----SIGTLKNNLLISQERADVIKSYLIQR 144
++A+ + + + V+ + HTD G L++N +S RA + YLI +
Sbjct: 245 DILASAILELEGQIPDEINWVLRVDGHTDARPLSGTGRLRDNWELSAARAISVVKYLISK 304
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
GV +R ++ GF P++ T N+RIE+++ R
Sbjct: 305 GVEPDRLVAA-GFGEFQPLEEGTTDEAYAKNRRIELKLTQR 344
>gi|145633105|ref|ZP_01788837.1| Outer membrane protein P5 [Haemophilus influenzae 3655]
gi|144986331|gb|EDJ92910.1| Outer membrane protein P5 [Haemophilus influenzae 3655]
Length = 359
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L + +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 242 SDVTFAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 301
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 302 VANYFVAK-GVAADAISATGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAV 355
>gi|16273088|ref|NP_439322.1| outer membrane protein P5 [Haemophilus influenzae Rd KW20]
gi|1171899|sp|P43840|OMP51_HAEIN RecName: Full=Outer membrane protein P5; Short=OMP P5; Flags:
Precursor
gi|1574091|gb|AAC22819.1| outer membrane protein P5 (ompA) [Haemophilus influenzae Rd KW20]
Length = 353
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 236 SDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 295
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 296 VANYFVAK-GVAADAISATGYGKANPVTGATCDQVKGRKALIACFAPDRRVEIAV 349
>gi|315110066|gb|EFT82042.1| OmpA family protein [Propionibacterium acnes HL030PA2]
Length = 120
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + ++ ++ A L S I + +TDS G+ +NL +S+ RA
Sbjct: 13 SVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDSSGSASHNLDLSRRRAAS 72
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L + ++ G P+ +ND++ GR+ N+R+ I +
Sbjct: 73 VAKVLGSQLSKGITLVTA-GKGEADPVTSNDSEAGRRLNRRVTITV 117
>gi|308182972|ref|YP_003927099.1| flagellar motor protein MotB [Helicobacter pylori PeCan4]
gi|308065157|gb|ADO07049.1| flagellar motor protein MotB [Helicobacter pylori PeCan4]
Length = 255
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 65/208 (31%), Gaps = 33/208 (15%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIGTLKNNL---LISQERADVIKSYLIQRGVSSNRFI 152
+ IA I+ K P V I ++ TD K ++ + + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDTPLDKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL 202
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
S + PI ND+ R N R+EI
Sbjct: 203 SFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|170681860|ref|YP_001744213.1| outer membrane protein A [Escherichia coli SMS-3-5]
gi|170519578|gb|ACB17756.1| outer membrane protein A [Escherichia coli SMS-3-5]
Length = 358
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 231 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 346
>gi|193227219|gb|ACF16394.1| outer membrane protein P6 [Pasteurella pneumotropica]
Length = 156
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + +E +++ +L A LN P++ + ++ +TD GT + N+ +
Sbjct: 45 EDLQQRYNTVYFGFDKYNIEGEYVQILDAHAAYLNATPASKVIVEGNTDERGTPEYNIAL 104
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
Q RAD +KS+L + +S + + P + N+R
Sbjct: 105 GQRRADAVKSFLAGK-GVEGSKVSTVSYGEEKPAVLGHDEAAYSKNRR 151
>gi|168237123|ref|ZP_02662181.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194734413|ref|YP_002114070.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|194709915|gb|ACF89136.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197289811|gb|EDY29172.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|322616444|gb|EFY13353.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322619695|gb|EFY16570.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322622609|gb|EFY19454.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629758|gb|EFY26533.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632520|gb|EFY29266.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636985|gb|EFY33688.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641475|gb|EFY38113.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646058|gb|EFY42574.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649640|gb|EFY46071.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654059|gb|EFY50382.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658591|gb|EFY54853.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663448|gb|EFY59650.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322670184|gb|EFY66324.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671420|gb|EFY67542.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676776|gb|EFY72843.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682700|gb|EFY78719.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686380|gb|EFY82362.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323195127|gb|EFZ80309.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323199809|gb|EFZ84898.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202802|gb|EFZ87838.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209073|gb|EFZ94010.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323213664|gb|EFZ98452.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323217967|gb|EGA02682.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221999|gb|EGA06386.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226572|gb|EGA10777.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323229768|gb|EGA13891.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323232993|gb|EGA17089.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240728|gb|EGA24770.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243044|gb|EGA27065.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249793|gb|EGA33695.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252735|gb|EGA36573.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323259149|gb|EGA42793.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259972|gb|EGA43600.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323268028|gb|EGA51507.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323269876|gb|EGA53325.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 369
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 242 SDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 302 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 357
>gi|153830883|ref|ZP_01983550.1| putative outer membrane protein [Vibrio cholerae 623-39]
gi|148873634|gb|EDL71769.1| putative outer membrane protein [Vibrio cholerae 623-39]
Length = 212
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 56/136 (41%), Gaps = 7/136 (5%)
Query: 61 TGIVVSRIGDMITCYIPV-----HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
G + G + +E FL ++ +A L +PST I +Q
Sbjct: 68 KGSEIDNDGCGTFVKSSQMQQLHILFANDSSSIEPAFLTQIRQMAEFLQTYPSTSIELQG 127
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ +G+ ++NL +S++R++ ++ L+ R + +++ G+ V N
Sbjct: 128 YASKVGSAEHNLALSKQRSEAVRDQLL-RYGVAPERVNIVGYGDSVLEVEGTDDVSHARN 186
Query: 176 QRIEIQIFP-RGNIKK 190
+R+ + +G + K
Sbjct: 187 RRVTATVVGYKGEVVK 202
>gi|119775227|ref|YP_927967.1| OmpA/MotB [Shewanella amazonensis SB2B]
gi|119767727|gb|ABM00298.1| OmpA/MotB [Shewanella amazonensis SB2B]
Length = 289
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V L + L + L+ P I I ++TDS G N +S +
Sbjct: 177 IAFTVLNYESGGTELTRFSKAQLARVQEYLSLDPDVELILINAYTDSHGGRNLNQKVSDK 236
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RAD +K + + + I G + +N RQ N+R+ IQI
Sbjct: 237 RADSVKDFFVSK-GIPADRIQTEGHGETRHVASNQGADERQRNRRVVIQIT 286
>gi|37704626|gb|AAR01585.1| OprF [Pseudomonas sp. MFY71]
Length = 321
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++P+T ++ H
Sbjct: 214 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYADIKNLADFMKQYPATHTTVEGH 273
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L Q+ + G+ P+
Sbjct: 274 TDSVGPDAYNQKLSERRANAVKQVLTQQYGVETARVQSIGYGESRPVA 321
>gi|329755848|gb|AEC04321.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 12/137 (8%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + + L+ +L I + + S +A+ +TD
Sbjct: 224 GQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDR 283
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR----- 172
+G+ NL +SQ RAD + +YL+ + + IS G P+ N D+ GR
Sbjct: 284 LGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISATGHGEANPVTGNKCDSVKGRKALIA 342
Query: 173 --QNNQRIEIQIFPRGN 187
+++R+EI + +GN
Sbjct: 343 CLADDRRVEIAV--KGN 357
>gi|329755832|gb|AEC04313.1| outer membrane protein A [Pasteurella multocida]
gi|329755834|gb|AEC04314.1| outer membrane protein A [Pasteurella multocida]
gi|329755836|gb|AEC04315.1| outer membrane protein A [Pasteurella multocida]
gi|329755838|gb|AEC04316.1| outer membrane protein A [Pasteurella multocida]
gi|329755844|gb|AEC04319.1| outer membrane protein A [Pasteurella multocida]
gi|329755850|gb|AEC04322.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 12/137 (8%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + + L+ +L I + + S +A+ +TD
Sbjct: 224 GQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDR 283
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR----- 172
+G+ NL +SQ RAD + +YL+ + + IS G P+ N D+ GR
Sbjct: 284 LGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISATGHGEANPVTGNKCDSVKGRKALIA 342
Query: 173 --QNNQRIEIQIFPRGN 187
+++R+EI + +GN
Sbjct: 343 CLADDRRVEIAV--KGN 357
>gi|329755830|gb|AEC04312.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 12/137 (8%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + + L+ +L I + + S +A+ +TD
Sbjct: 224 GQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDR 283
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR----- 172
+G+ NL +SQ RAD + +YL+ + + IS G P+ N D+ GR
Sbjct: 284 LGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISATGHGEANPVTGNKCDSVKGRKALIA 342
Query: 173 --QNNQRIEIQIFPRGN 187
+++R+EI + +GN
Sbjct: 343 CLADDRRVEIAV--KGN 357
>gi|327479764|gb|AEA83074.1| outer membrane protein [Pseudomonas stutzeri DSM 4166]
Length = 297
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
S+V L+ L +I L PS I + H+D+ G N +S+
Sbjct: 171 VRQSQIGFPSSDVALDALGRAKLDIILQYLRADPSVNRIQLDGHSDNSGNRLVNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
RA ++ YLI + I+VR +YP+ N ++ R N+R+
Sbjct: 231 RALAVQEYLIAN-GVPEQQITVRFHGERYPLVANSSEANRAKNRRV 275
>gi|260581134|ref|ZP_05848955.1| outer membrane protein P5 [Haemophilus influenzae RdAW]
gi|260092263|gb|EEW76205.1| outer membrane protein P5 [Haemophilus influenzae RdAW]
Length = 353
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 236 SDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 295
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 296 VANYFVAK-GVAADAISATGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAV 349
>gi|255622212|ref|XP_002540262.1| conserved hypothetical protein [Ricinus communis]
gi|223497476|gb|EEF22121.1| conserved hypothetical protein [Ricinus communis]
Length = 160
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT- 117
+ + P + + + + L ++ ++ ++ + + I HT
Sbjct: 30 EGEAFKPKTQEKATMKFTPRILFQANSAIILPESYADLDIVYDVVKEWGNDKVEIAGHTD 89
Query: 118 -DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+ K NL++S++RA + YL+++G+ + R + V+G+ + PI ND G N+
Sbjct: 90 KRNTSKEKYNLVLSEKRAKAVADYLVKKGMDAQRLV-VKGYGFSQPIAENDPVSGNDANR 148
Query: 177 RIEIQ 181
R+E+
Sbjct: 149 RVEVI 153
>gi|62548381|gb|AAX86828.1| outer membrane protein [Pasteurella multocida]
Length = 358
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 12/137 (8%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + + L+ +L I + + S +A+ +TD
Sbjct: 224 GQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDR 283
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR----- 172
+G+ NL +SQ RAD + +YL+ + + IS G P+ N D+ GR
Sbjct: 284 LGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISATGHGEANPVTGNKCDSVKGRKALIA 342
Query: 173 --QNNQRIEIQIFPRGN 187
+++R+EI + +GN
Sbjct: 343 CLADDRRVEIAV--KGN 357
>gi|49182350|gb|AAT57677.1| OmpA [Pasteurella multocida]
Length = 351
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 12/137 (8%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + + L+ +L I + + S +A+ +TD
Sbjct: 217 GQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDR 276
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR----- 172
+G+ NL +SQ RAD + +YL+ + + IS G P+ N D+ GR
Sbjct: 277 LGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISATGHGEANPVTGNKCDSVKGRKALIA 335
Query: 173 --QNNQRIEIQIFPRGN 187
+++R+EI + +GN
Sbjct: 336 CLADDRRVEIAV--KGN 350
>gi|49182356|gb|AAT57680.1| OmpA [Pasteurella multocida]
Length = 353
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 12/137 (8%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + + L+ +L I + + S +A+ +TD
Sbjct: 219 GQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDR 278
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR----- 172
+G+ NL +SQ RAD + +YL+ + + IS G P+ N D+ GR
Sbjct: 279 LGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISATGHGEANPVTGNKCDSVKGRKALIA 337
Query: 173 --QNNQRIEIQIFPRGN 187
+++R+EI + +GN
Sbjct: 338 CLADDRRVEIAV--KGN 352
>gi|15602651|ref|NP_245723.1| hypothetical protein PM0786 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721089|gb|AAK02870.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 353
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 12/137 (8%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + + L+ +L I + + S +A+ +TD
Sbjct: 219 GQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDR 278
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR----- 172
+G+ NL +SQ RAD + +YL+ + + IS G P+ N D+ GR
Sbjct: 279 LGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISATGHGEANPVTGNKCDSVKGRKALIA 337
Query: 173 --QNNQRIEIQIFPRGN 187
+++R+EI + +GN
Sbjct: 338 CLADDRRVEIAV--KGN 352
>gi|327393374|dbj|BAK10796.1| outer membrane protein A precursor OmpA [Pantoea ananatis AJ13355]
Length = 363
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ + N +S++RA
Sbjct: 236 SDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRIGSEQYNQKLSEKRA 295
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR-------QNNQRIEIQI 182
+ YL+ + IS RG P+ N D+ GR ++R+EI +
Sbjct: 296 QSVVDYLVSK-GIPANKISARGMGESNPVTGNTCDSVKGRKALIDCLAPDRRVEIDV 351
>gi|324009900|gb|EGB79119.1| outer membrane protein A [Escherichia coli MS 57-2]
Length = 354
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 227 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 286
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 287 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 342
>gi|320196555|gb|EFW71178.1| Outer membrane protein A precursor [Escherichia coli WV_060327]
gi|330910729|gb|EGH39239.1| outer membrane protein A precursor [Escherichia coli AA86]
Length = 358
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 231 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 346
>gi|312968985|ref|ZP_07783192.1| outer membrane protein A [Escherichia coli 2362-75]
gi|312286387|gb|EFR14300.1| outer membrane protein A [Escherichia coli 2362-75]
Length = 346
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 219 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 278
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 279 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 334
>gi|307627623|gb|ADN71927.1| outer membrane protein A [Escherichia coli UM146]
Length = 365
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 238 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 297
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 298 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 353
>gi|307552789|gb|ADN45564.1| outer membrane protein A [Escherichia coli ABU 83972]
Length = 350
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 223 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 283 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 338
>gi|312945470|gb|ADR26297.1| outer membrane protein A [Escherichia coli O83:H1 str. NRG 857C]
Length = 365
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 238 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 297
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 298 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 353
>gi|306812596|ref|ZP_07446789.1| outer membrane protein A [Escherichia coli NC101]
gi|305853359|gb|EFM53798.1| outer membrane protein A [Escherichia coli NC101]
Length = 365
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 238 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 297
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 298 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 353
>gi|281178081|dbj|BAI54411.1| outer membrane protein OmpA [Escherichia coli SE15]
gi|323190770|gb|EFZ76039.1| outer membrane protein A [Escherichia coli RN587/1]
Length = 350
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 223 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 283 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 338
>gi|227884084|ref|ZP_04001889.1| OOP family OmpA-OmpF porin [Escherichia coli 83972]
gi|300978356|ref|ZP_07174229.1| outer membrane protein A [Escherichia coli MS 45-1]
gi|301047785|ref|ZP_07194839.1| outer membrane protein A [Escherichia coli MS 185-1]
gi|227838836|gb|EEJ49302.1| OOP family OmpA-OmpF porin [Escherichia coli 83972]
gi|300300348|gb|EFJ56733.1| outer membrane protein A [Escherichia coli MS 185-1]
gi|300409701|gb|EFJ93239.1| outer membrane protein A [Escherichia coli MS 45-1]
gi|315291176|gb|EFU50536.1| outer membrane protein A [Escherichia coli MS 153-1]
Length = 358
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 231 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 346
>gi|218688793|ref|YP_002397005.1| outer membrane protein A [Escherichia coli ED1a]
gi|218426357|emb|CAR07182.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli ED1a]
Length = 346
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 219 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 278
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 279 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 334
>gi|218700524|ref|YP_002408153.1| outer membrane protein A [Escherichia coli IAI39]
gi|331646217|ref|ZP_08347320.1| outer membrane protein A [Escherichia coli M605]
gi|218370510|emb|CAR18317.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI39]
gi|331044969|gb|EGI17096.1| outer membrane protein A [Escherichia coli M605]
Length = 374
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 247 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 306
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 307 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 362
>gi|215486075|ref|YP_002328506.1| outer membrane protein A [Escherichia coli O127:H6 str. E2348/69]
gi|215264147|emb|CAS08491.1| outer membrane protein A (3a; II*; G; d) [Escherichia coli O127:H6
str. E2348/69]
Length = 346
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 219 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 278
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 279 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 334
>gi|117623167|ref|YP_852080.1| outer membrane protein A [Escherichia coli APEC O1]
gi|115512291|gb|ABJ00366.1| OmpA [Escherichia coli APEC O1]
Length = 370
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 243 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 302
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 303 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 358
>gi|110641146|ref|YP_668876.1| outer membrane protein A [Escherichia coli 536]
gi|331657022|ref|ZP_08357984.1| outer membrane protein A [Escherichia coli TA206]
gi|110342738|gb|ABG68975.1| outer membrane protein A [Escherichia coli 536]
gi|222032681|emb|CAP75420.1| Outer membrane protein A [Escherichia coli LF82]
gi|331055270|gb|EGI27279.1| outer membrane protein A [Escherichia coli TA206]
Length = 346
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 219 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 278
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 279 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 334
>gi|91210052|ref|YP_540038.1| outer membrane protein A [Escherichia coli UTI89]
gi|237707059|ref|ZP_04537540.1| outer membrane protein A [Escherichia sp. 3_2_53FAA]
gi|91071626|gb|ABE06507.1| outer membrane protein A precursor [Escherichia coli UTI89]
gi|226898269|gb|EEH84528.1| outer membrane protein A [Escherichia sp. 3_2_53FAA]
Length = 375
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 248 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 307
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 308 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 363
>gi|218557855|ref|YP_002390768.1| outer membrane protein A [Escherichia coli S88]
gi|7188818|gb|AAF37887.1|AF234269_1 outer membrane protein A [Escherichia coli RS218]
gi|218364624|emb|CAR02310.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli S88]
gi|294493105|gb|ADE91861.1| outer membrane protein A [Escherichia coli IHE3034]
gi|323953341|gb|EGB49207.1| OmpA transmembrane domain-containing protein [Escherichia coli
H252]
gi|323958256|gb|EGB53965.1| OmpA transmembrane domain-containing protein [Escherichia coli
H263]
Length = 346
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 219 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 278
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 279 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 334
>gi|26246978|ref|NP_753018.1| outer membrane protein A [Escherichia coli CFT073]
gi|26107378|gb|AAN79561.1|AE016758_165 Outer membrane protein A precursor [Escherichia coli CFT073]
Length = 379
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 252 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 311
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 312 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 367
>gi|291616946|ref|YP_003519688.1| OmpA [Pantoea ananatis LMG 20103]
gi|291151976|gb|ADD76560.1| OmpA [Pantoea ananatis LMG 20103]
Length = 367
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ + N +S++RA
Sbjct: 240 SDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRIGSEQYNQKLSEKRA 299
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR-------QNNQRIEIQI 182
+ YL+ + IS RG P+ N D+ GR ++R+EI +
Sbjct: 300 QSVVDYLVSK-GIPANKISARGMGESNPVTGNTCDSVKGRKALIDCLAPDRRVEIDV 355
>gi|260779320|ref|ZP_05888212.1| putative sodium-type flagellar protein MotY precursor [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605484|gb|EEX31779.1| putative sodium-type flagellar protein MotY precursor [Vibrio
coralliilyticus ATCC BAA-450]
Length = 303
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L + L + T L + + I +TD++G+ NL IS++RAD++
Sbjct: 181 FDLGQRHLTVQQTNTLGALYTYLRADKNISKVLIDGYTDNVGSNVANLTISKQRADLVAK 240
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ-------IFPRGNIK 189
+++ I VR +YPI +N T G+ N+R+ ++ + P+ NIK
Sbjct: 241 -ALKKSGVEAARIEVRSHGSRYPIASNSTPEGQAKNRRVTLRLVRNDEAVVPKQNIK 296
>gi|145627861|ref|ZP_01783662.1| Outer membrane protein P5 [Haemophilus influenzae 22.1-21]
gi|144979636|gb|EDJ89295.1| Outer membrane protein P5 [Haemophilus influenzae 22.1-21]
Length = 358
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 241 SDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 300
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 301 VANYFVAK-GVAADAISATGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAV 354
>gi|99082187|ref|YP_614341.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99038467|gb|ABF65079.1| OmpA family protein [Ruegeria sp. TM1040]
Length = 207
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 58/178 (32%), Gaps = 19/178 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K + + + C + A L
Sbjct: 1 MLKYAAI-LGLALATGACAYK---------------EAGEPLDPKYFGSANANNTAVLSG 44
Query: 61 TGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
++ +P + L+ + +L A + +FP + HTD+
Sbjct: 45 DRSYRVQLATRFANEVPSTINFDFDSARLDGEARRVLDTQAKWIRQFPEVRFRVYGHTDA 104
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+G+ N + RA +YL+ RG+S +R +V F P+ D + R N+R
Sbjct: 105 VGSQTYNKRLGLRRARAAVNYLVSRGISRSRLEAVASFGETQPLIVTDQRERR--NRR 160
>gi|315287600|gb|EFU47006.1| outer membrane protein A [Escherichia coli MS 110-3]
Length = 354
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 227 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 286
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 287 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 342
>gi|300982950|ref|ZP_07176384.1| outer membrane protein A [Escherichia coli MS 200-1]
gi|300307039|gb|EFJ61559.1| outer membrane protein A [Escherichia coli MS 200-1]
gi|315296266|gb|EFU55573.1| outer membrane protein A [Escherichia coli MS 16-3]
gi|324012909|gb|EGB82128.1| outer membrane protein A [Escherichia coli MS 60-1]
Length = 354
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 227 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRA 286
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 287 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 342
>gi|127512450|ref|YP_001093647.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
gi|126637745|gb|ABO23388.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 286
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V L + + + L+ P + I ++TDS G N +S++
Sbjct: 173 IAFTVLTYEFGGSELTRYSKAQIAKVQEYLSYDPEVELVLIDAYTDSFGGRSVNKKVSEK 232
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ +K + N I G + + +NDT R N+R+ I++
Sbjct: 233 RANSVKQLFLSA-GIPNERIHTYGHGERRHVASNDTIDERARNRRVVIRL 281
>gi|323494859|ref|ZP_08099951.1| OmpA family protein [Vibrio brasiliensis LMG 20546]
gi|323310823|gb|EGA63995.1| OmpA family protein [Vibrio brasiliensis LMG 20546]
Length = 296
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 22/177 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M L + + ++ C DT + + D ++F L
Sbjct: 1 MKLNTLLVIGMALGLTACST--------------DTYVSKENIDKFGDPQVEKF---LIR 43
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
IV R I + H F + L+++ + + + K I+I HTD
Sbjct: 44 ECIVPERD---IRIAMASHFDF-DKSELKEQDKQSIDQLMASIGKLHG-QISIVGHTDYQ 98
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ N+ +S RA+ +K+Y+ + +S V+ + P+ +K N+R
Sbjct: 99 GSDDYNVKLSLRRAEAVKAYMQSKLDASRYDWEVKYYGESKPLVEGVSKQANAENRR 155
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 40/123 (32%), Gaps = 2/123 (1%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + L L A+ L + I HTD G++ N
Sbjct: 176 EPERKVYVAMTSHFDFDKAQLNPADKASLDEFASNLTGLNG-RVLIAGHTDYQGSISYNE 234
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++Q RA+ + YL + S V+ F P+ N+R +F G
Sbjct: 235 KLAQLRAESVMQYLQTKLDPSQFVWEVKSFGELNPVTQEQDLDANALNRRA-FVVFKEGE 293
Query: 188 IKK 190
+ +
Sbjct: 294 LPE 296
>gi|225075466|ref|ZP_03718665.1| hypothetical protein NEIFLAOT_00471 [Neisseria flavescens
NRL30031/H210]
gi|224953284|gb|EEG34493.1| hypothetical protein NEIFLAOT_00471 [Neisseria flavescens
NRL30031/H210]
Length = 253
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 75/213 (35%), Gaps = 32/213 (15%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKK-VFLHKSNDTDIVNKRFGS-----SLDKAEDE 53
M K+L L ++F+ SG +AS K + S +IV +G DKA
Sbjct: 1 MTKQLKLSALFVALVASGTAMASEAHTKHGYTVSSKSQEIVRNNYGECWKNSYFDKATQG 60
Query: 54 FQMQLQDTGIVVSRIG----DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ + D + + L + L +A L+
Sbjct: 61 RVECGDREAVAPVQQAPEYVDETVSLSTKTLFGFDKDNLRPEAQENLDALAQRLSNKDVQ 120
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ ++ HTD +G+ + N +S+ RA+V+ +YL+ ++ IS G T +
Sbjct: 121 TVRVEGHTDFMGSEQYNQALSERRANVVANYLVG-HGVASSKISAVGLGESQAQMTATCE 179
Query: 170 VGRQN--------------------NQRIEIQI 182
++R++++I
Sbjct: 180 AEVAKLGKKVSKAKKRAALIACIEPDRRVDVKI 212
>gi|297539675|ref|YP_003675444.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301]
gi|297259022|gb|ADI30867.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301]
Length = 191
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 57/167 (34%), Gaps = 5/167 (2%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA---EDEFQMQLQDTGIVVSRIGDMITC 74
C K V + + + + D + E D+G + + I
Sbjct: 23 CKSTPMNTKPVTVEDKSPAQVTKPAENTGADTSAVKEVAIDGNATDSGNNPLKDPNNI-L 81
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
++ +F P+++ A L S + +Q +TD GT + NL + Q R+
Sbjct: 82 SKRNVYFDFDSDAVKAEFRPLIEAHAKYLLAHTSAKVILQGNTDERGTREYNLSLGQRRS 141
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+K + + I F + + + N+R+++
Sbjct: 142 VAVKK-SLNLLGVQDAQIETVSFGEEKATEGCADDACSKQNRRVDVV 187
>gi|148977601|ref|ZP_01814177.1| sodium-type flagellar protein MotY precursor [Vibrionales bacterium
SWAT-3]
gi|145963116|gb|EDK28384.1| sodium-type flagellar protein MotY precursor [Vibrionales bacterium
SWAT-3]
Length = 284
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ + L K L IA + ++ + ++TDS + + +S+
Sbjct: 171 ISFTILHYDRNSDQLNKSSRKRLSQIAEYVRYNQDIDLVLVATYTDSADSKGISQNLSER 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ ++ Y G+ +R I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 231 RAESLREYFKSLGLPEDR-IQVQGYGKRRPIADNSSPIGKDKNRRVVISL 279
>gi|332664542|ref|YP_004447330.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332333356|gb|AEE50457.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 226
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 61/175 (34%), Gaps = 14/175 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI------- 72
+ N+T + K + +D+ + L+ +G+ +
Sbjct: 50 SPEEDPLGAIEDMVNETKALAKEEAARVDEKTQKALESLRSVKFDPETVGEKLYQAILAG 109
Query: 73 ------TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ + P L +A I+ FP I +HT +G N
Sbjct: 110 KDLKMEVFLFKTLNFVPEQADVLPAMKPELTQLANIMAAFPEFKFQIAAHTAGVGDHILN 169
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L +S RA I +++ + + RG+ + PI + GR+ NQRIE+
Sbjct: 170 LTLSHHRATSIVE-ALEKMGVAKSRMKARGYGDELPIADHTMPEGREANQRIELT 223
>gi|329755860|gb|AEC04327.1| outer membrane protein A [Pasteurella multocida]
gi|329755868|gb|AEC04331.1| outer membrane protein A [Pasteurella multocida]
gi|329755870|gb|AEC04332.1| outer membrane protein A [Pasteurella multocida]
gi|329755872|gb|AEC04333.1| outer membrane protein A [Pasteurella multocida]
Length = 348
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 62/162 (38%), Gaps = 22/162 (13%)
Query: 45 SSLDKAEDEFQMQLQ----------DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
D +F+ + + V + + L+
Sbjct: 189 EYADGQYADFRPDIGSVTAGLSYRFGQSVYVPEVVSKTFTLNTDVTFGFDKADLKPAAQN 248
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+L I + + S +A+ +TD +G+ NL +SQ RAD + +YL+ + + IS
Sbjct: 249 VLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISA 307
Query: 155 RGFAYKYPIDTN--DTKVGR-------QNNQRIEIQIFPRGN 187
G P+ N D+ GR +++R+EI + +GN
Sbjct: 308 TGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAV--KGN 347
>gi|315281340|ref|ZP_07869986.1| chemotaxis protein MotB [Listeria marthii FSL S4-120]
gi|313615016|gb|EFR88514.1| chemotaxis protein MotB [Listeria marthii FSL S4-120]
Length = 275
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 59/171 (34%), Gaps = 7/171 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A+ ++K + ++ + + + + T + + + I +
Sbjct: 95 ANEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDDI 154
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE------R 133
F L + + I + + T+ I S + ++ S
Sbjct: 155 LFQSGSAELSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARA 214
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +++ + + + S RG+ P+ ND V R+ N+R+EI + P
Sbjct: 215 VNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAVNREKNRRVEIMVRP 265
>gi|258620771|ref|ZP_05715806.1| Outer membrane protein A [Vibrio mimicus VM573]
gi|258586969|gb|EEW11683.1| Outer membrane protein A [Vibrio mimicus VM573]
Length = 213
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 62/189 (32%), Gaps = 24/189 (12%)
Query: 2 IKELGLSMFIMTTISGCGLASREKK------KVFLHKS---------NDTDIVNKRFGSS 46
+K + + ++GCG + ++ V +
Sbjct: 1 MK--FWVLCVAFLLTGCGSLATDRMFNDNLLDVAPKGDFDVRYPEWGMAPQLNTAGVQGP 58
Query: 47 LDKAE----DEFQMQLQDTGIVVSRI-GDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIA 100
L + + + L + GI + GD + + + + L +A
Sbjct: 59 LKQVRTSSYEALRQFLLNNGIDHEIMPGDYPMIKLKNTIKFDTGSAKVSVQSKQWLDRMA 118
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L I ++ HTD+ G K N +S++RA + + + + I RG+
Sbjct: 119 QFLASESGIDIVLEGHTDNTGAQKFNDTLSEKRASSV-KTALVQRQVAQNAIYTRGYGEH 177
Query: 161 YPIDTNDTK 169
P TN TK
Sbjct: 178 VPACTNKTK 186
>gi|289165851|ref|YP_003455989.1| lipoprotein [Legionella longbeachae NSW150]
gi|288859024|emb|CBJ12952.1| putative lipoprotein [Legionella longbeachae NSW150]
Length = 239
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 71/208 (34%), Gaps = 29/208 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREK-----------KKVFLHKSNDTDIVNKRFGSSL--- 47
+++ FI +S C + + +L
Sbjct: 7 KRKIIYCGFITCLLSSCVHPPYNNFKPVHPMPKRVVTGAVVGTAVGAATTGTVAGALVGT 66
Query: 48 -------------DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFL 93
+ +L + I + GD +T +PV F+ E L +
Sbjct: 67 AAGGVAGAVVGFSKTSSRSIIKELNNENIEFVQYGDTMTLIVPVDKYFMFESPRLNEICY 126
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
P L I +L +P + + + TD +GT + +SQ +A+ + ++L + +
Sbjct: 127 PGLINIVRLLKFYPLSPVYVAGFTDDVGTRYHKRSLSQAQAETMLTFLWAN-NIPAQLLK 185
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G+ K + N G N+RIEIQ
Sbjct: 186 AEGYGDKNDVGDNKLIHGSAFNRRIEIQ 213
>gi|270159328|ref|ZP_06187984.1| OmpA family outer membrane protein [Legionella longbeachae D-4968]
gi|269987667|gb|EEZ93922.1| OmpA family outer membrane protein [Legionella longbeachae D-4968]
Length = 249
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 71/208 (34%), Gaps = 29/208 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREK-----------KKVFLHKSNDTDIVNKRFGSSL--- 47
+++ FI +S C + + +L
Sbjct: 17 KRKIIYCGFITCLLSSCVHPPYNNFKPVHPMPKRVVTGAVVGTAVGAATTGTVAGALVGT 76
Query: 48 -------------DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFL 93
+ +L + I + GD +T +PV F+ E L +
Sbjct: 77 AAGGVAGAVVGFSKTSSRSIIKELNNENIEFVQYGDTMTLIVPVDKYFMFESPRLNEICY 136
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
P L I +L +P + + + TD +GT + +SQ +A+ + ++L + +
Sbjct: 137 PGLINIVRLLKFYPLSPVYVAGFTDDVGTRYHKRSLSQAQAETMLTFLWAN-NIPAQLLK 195
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G+ K + N G N+RIEIQ
Sbjct: 196 AEGYGDKNDVGDNKLIHGSAFNRRIEIQ 223
>gi|154252545|ref|YP_001413369.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans
DS-1]
gi|154156495|gb|ABS63712.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1]
Length = 338
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 16/164 (9%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ + + + + +GD +
Sbjct: 179 AALAQKVQELAKYRSEFFGRLR-AILGDRQDIEIVGDRFAMQ-SEIFFESGSADINPSGK 236
Query: 94 PMLQLIATILNKFPS-------TVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLI 142
L IAT + + + V+ + HTD+ +N +S RA + +YL+
Sbjct: 237 EQLDKIATAVREIAAEIPDDIPWVLRVDGHTDANPIATAQFPSNWYLSSARAIAVVNYLV 296
Query: 143 QRGVSSNRFISVRGFAYKYPIDTND-TKVGRQNNQRIEIQIFPR 185
+RGV NR ++ GF +P+ T R N+RIE ++ R
Sbjct: 297 ERGVPQNRLVAA-GFGQYHPLADGRGTAENR-RNRRIEFKLTER 338
>gi|152965627|ref|YP_001361411.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
gi|151360144|gb|ABS03147.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
Length = 342
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 58/171 (33%), Gaps = 10/171 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI--P 77
A + + L + + + +D + + D + +
Sbjct: 111 AAQTAQTQEDLKAAQEEVQDYREIAKQID---AALTAKGDQDQVTYRITSDGLVVGLVAD 167
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ +E+K +L +IA IL + P+ IA+Q HT+S+
Sbjct: 168 NVFFANASAEVEEKGREVLDVIAPILAQLPN-DIAVQGHTNSLSLSATTRYRDNWDLSAA 226
Query: 138 KSYLIQRG----VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++ + + +S G+A P+ N+ N+R+++ +
Sbjct: 227 RAMTVVQRFTAAGIPGNHLSGTGYADSRPLYPNEDPKALTGNRRVDLVVAS 277
>gi|317402072|gb|EFV82666.1| hypothetical protein HMPREF0005_00359 [Achromobacter xylosoxidans
C54]
Length = 495
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 46/158 (29%), Gaps = 18/158 (11%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
K + +D + G ++ L + + +A
Sbjct: 67 KVADTQVDPLATPKPQGGGSADAAKTTAGLSVSIIDKGEQFAPGSAILTPQAAKAMADLA 126
Query: 101 TILNK-----------------FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ I + HTD G+ + N +S+ RA + +
Sbjct: 127 DTYRDVAAASASAKDRDAVNARNNAMRILLVGHTDDTGSSQLNADLSEARARAVAKIFVS 186
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
R I +G PI N + GR N+R+E+
Sbjct: 187 R-GFRADQIFYQGAGETLPIADNHSAAGRARNRRVEVV 223
>gi|269128089|ref|YP_003301459.1| OmpA/MotB domain-containing protein [Thermomonospora curvata DSM
43183]
gi|268313047|gb|ACY99421.1| OmpA/MotB domain protein [Thermomonospora curvata DSM 43183]
Length = 365
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 2/123 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTD 118
T I + + + V F L L + L + + + + HTD
Sbjct: 71 TPIEETTEKGRKSFTLQADVLFKTGSADLSAAAEKYLADVVAKLKEANVTGEVQVVGHTD 130
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+G ++NL +S+ RA+ + + + ++ + G P + + RQ N+R+
Sbjct: 131 DVGEPEDNLALSKRRAEAVVQAMQPQLANTGITLIPEGKGESEPREKGTSPQARQRNRRV 190
Query: 179 EIQ 181
I
Sbjct: 191 SIL 193
>gi|145631210|ref|ZP_01786983.1| Outer membrane protein P5 [Haemophilus influenzae R3021]
gi|144983137|gb|EDJ90632.1| Outer membrane protein P5 [Haemophilus influenzae R3021]
Length = 314
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 197 SDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 256
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 257 VANYFVAK-GVAADAISATGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAV 310
>gi|73541910|ref|YP_296430.1| OmpA/MotB [Ralstonia eutropha JMP134]
gi|72119323|gb|AAZ61586.1| OmpA/MotB [Ralstonia eutropha JMP134]
Length = 186
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 2/134 (1%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
LQ G + +G + + V F + + + ++ + +L
Sbjct: 53 LTPAQVAVLQQEGFTETDVGWELGRPLKVLFGFDEDA-IPPDRIADIRRLGGVLLGVGID 111
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ + HTD G+ + NL +S RA+ + L+ I +RG P+ N T
Sbjct: 112 HVRVDGHTDHTGSTEYNLRLSLRRAEAVARVLVTA-GFEPANIELRGMGKGRPVADNRTA 170
Query: 170 VGRQNNQRIEIQIF 183
GR N+R I +
Sbjct: 171 AGRAENRRASIVVT 184
>gi|218262635|ref|ZP_03477017.1| hypothetical protein PRABACTJOHN_02696 [Parabacteroides johnsonii
DSM 18315]
gi|218223264|gb|EEC95914.1| hypothetical protein PRABACTJOHN_02696 [Parabacteroides johnsonii
DSM 18315]
Length = 663
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + L + +LN P+ I + +HTD G+ + N ++Q R
Sbjct: 521 VVIENIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDRKGSEQYNERLAQRR 580
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND---------------TKV-------- 170
A + YLI + + +G+ P N T+
Sbjct: 581 AQSVVDYLIAG-GIAQDRLEAKGYGESVPKTINKKMAKNYDFLNEGDVLTEEFIDKLTPE 639
Query: 171 ----GRQNNQRIEIQIF 183
Q N+R E ++
Sbjct: 640 QQEIADQINRRTEFKVL 656
>gi|145641242|ref|ZP_01796822.1| Outer membrane protein P5 [Haemophilus influenzae R3021]
gi|145274079|gb|EDK13945.1| Outer membrane protein P5 [Haemophilus influenzae 22.4-21]
Length = 358
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 241 SDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 300
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 301 VANYFVAK-GVAADAISATGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAV 354
>gi|305664380|ref|YP_003860667.1| OmpA family protein [Maribacter sp. HTCC2170]
gi|88708397|gb|EAR00633.1| OmpA family protein [Maribacter sp. HTCC2170]
Length = 646
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + + +Q + + K+PS I + SHTDS G NL +SQ+
Sbjct: 531 LLQLSTIYFDFDKYNIRSDSEIEIQKVIAAMEKYPSLKIKVNSHTDSRGRDAYNLWLSQK 590
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV-----GRQNNQRIEIQIF 183
RA+ +Y+I +G+ +R + GF I+ V + N+R E I
Sbjct: 591 RAESTVNYMISKGILESRLLG-EGFGETKLINKCANGVRCFGIEHEKNRRSEFIIL 645
>gi|145639315|ref|ZP_01794921.1| Outer membrane protein P5 [Haemophilus influenzae PittII]
gi|145271618|gb|EDK11529.1| Outer membrane protein P5 [Haemophilus influenzae PittII]
Length = 361
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 244 SDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 303
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 304 VANYFVAK-GVAADAISATGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAV 357
>gi|758341|emb|CAA26037.1| outer membrane protein (ompA) [Salmonella enterica subsp. enterica
serovar Typhimurium]
Length = 350
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + L+ + + TD IG+ N +S++RA
Sbjct: 223 SDVLFNFNKSTLKPEGQQALDQLYIQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 283 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 338
>gi|330807377|ref|YP_004351839.1| lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327375485|gb|AEA66835.1| Putative lipoprotein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 167
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 4/140 (2%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATIL 103
+ L+ G ++ D + V F S+V L +++ I L
Sbjct: 29 APQKGLTPAQIAVLKQQGFELT--DDGWAFGLSGKVLFGSDVENLNPASTEIVERIGKAL 86
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + HTD+ G+ N +S RA + ++ + +RG P+
Sbjct: 87 LGAGIQRVRVDGHTDASGSQAYNEQLSMRRAASVSK-VLTAVGMREENVQLRGLGSSKPV 145
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
+NDT GR N+R+ I +
Sbjct: 146 ASNDTASGRTENRRVAIVVI 165
>gi|156934557|ref|YP_001438473.1| outer membrane protein A [Cronobacter sakazakii ATCC BAA-894]
gi|156532811|gb|ABU77637.1| hypothetical protein ESA_02391 [Cronobacter sakazakii ATCC BAA-894]
Length = 358
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 13/168 (7%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+ D +++ + ED + T + ++
Sbjct: 181 DAQTVGARPDNGMLSVGVSYRFGQQEDAAPVVAPAPAPAPEVQTKHFTLK-SDVLFNFNK 239
Query: 86 VFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L+ + L + + L+ + + TD IG+ N +S++RA + YLI
Sbjct: 240 ATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLIS 299
Query: 144 RGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ + IS RG P+ N D R ++R+EI++
Sbjct: 300 K-GIPSNKISARGMGESNPVTGNTCDNVKPRAALIECLGPDRRVEIEV 346
>gi|329755856|gb|AEC04325.1| outer membrane protein A [Pasteurella multocida]
Length = 354
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ +L I + + S +A+ +TD +G+ NL +SQ RAD
Sbjct: 237 SDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRRADT 296
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR-------QNNQRIEIQIFPRGN 187
+ +YL+ + + IS G P+ N D+ GR +++R+EI + +GN
Sbjct: 297 VANYLVAK-GVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAV--KGN 353
>gi|320156464|ref|YP_004188843.1| outer membrane protein SypB [Vibrio vulnificus MO6-24/O]
gi|319931776|gb|ADV86640.1| outer membrane protein SypB [Vibrio vulnificus MO6-24/O]
Length = 280
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 56/152 (36%), Gaps = 12/152 (7%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPMLQ 97
+ E + L T V R D + + V+ + K++ L
Sbjct: 121 QLEQQLDYVLSHTRCVPPRDEDAFRFQLDIVNELYDILNIDNQFAVNSAEINPKYMGHLA 180
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
A IL + + + + H D+ G N ++ +RA+ +K YL I+
Sbjct: 181 KAANILREHTALTLTVTGHADATGNEAYNEKLAMDRAEQVKRYLAI-FGLDPNRITTYSL 239
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
K P+ ++ R N+R+ I+I N +
Sbjct: 240 GEKLPLFDGESAAVRLTNRRVSIEIQSPANTE 271
>gi|283484404|gb|ADB23432.1| OmpA [Cronobacter sakazakii]
Length = 347
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 13/168 (7%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+ D +++ + ED + T + ++
Sbjct: 170 DAQTVGARPDNGMLSVGVSYRFGQQEDAAPVVAPAPAPAPEVQTKHFTLK-SDVLFNFNK 228
Query: 86 VFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L+ + L + + L+ + + TD IG+ N +S++RA + YLI
Sbjct: 229 ATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLIS 288
Query: 144 RGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ + IS RG P+ N D R ++R+EI++
Sbjct: 289 K-GIPSNKISARGMGESNPVTGNTCDNVKPRAALIECLGPDRRVEIEV 335
>gi|284036230|ref|YP_003386160.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283815523|gb|ADB37361.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 757
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ +++ F+ L + IL ++P I ++SHTDS T N+ +S+
Sbjct: 640 VFQLKNIYYDLNKFFIRADAAQELDHVLEILKEYPQMQIELRSHTDSRATDTYNIRLSES 699
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-----NDTKVGRQNNQRIEIQIF 183
RA YL+ RG+S++R I RG+ I+ N T+ Q N+R E +I
Sbjct: 700 RARAAMDYLVARGISASRLI-ARGYGESEIINGCIDGVNCTEGEHQQNRRTEFKIV 754
>gi|170741264|ref|YP_001769919.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
gi|168195538|gb|ACA17485.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
Length = 337
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 13/140 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---T 109
Q+ + +GD + + L + L IA + + P
Sbjct: 200 QILGNRSDIRIVGDRFVLQ-SEVLFAAGQATLRPEAGAELDRIAVAIIELGRQIPPDIPW 258
Query: 110 VIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
V+ + HTD+ +N +S R+ + Y++ RG+ R + F P+DT
Sbjct: 259 VLRVDGHTDARPISSATFPSNWALSAARSIAVVQYMVGRGIPPQRLL-AGAFGEFQPLDT 317
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
T+ N+RIE+++ R
Sbjct: 318 GTTEEAYARNRRIELKLTER 337
>gi|27365951|ref|NP_761479.1| outer membrane protein [Vibrio vulnificus CMCP6]
gi|27362100|gb|AAO11006.1| Outer membrane protein [Vibrio vulnificus CMCP6]
Length = 280
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 56/152 (36%), Gaps = 12/152 (7%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPMLQ 97
+ E + L T V R D + + V+ + K++ L
Sbjct: 121 QLEQQLDYVLSHTRCVPPRDEDAFRFQLDIVNELYDILNIDNQFAVNSAEINPKYMGHLA 180
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
A IL + + + + H D+ G N ++ +RA+ +K YL I+
Sbjct: 181 KAANILREHTALTLTVTGHADATGNEAYNEKLAMDRAEQVKRYLAI-FGLDPNRITTYSL 239
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
K P+ ++ R N+R+ I+I N +
Sbjct: 240 GEKLPLFDGESAAVRLTNRRVSIEIQSPANTE 271
>gi|37679816|ref|NP_934425.1| outer membrane protein [Vibrio vulnificus YJ016]
gi|37198561|dbj|BAC94396.1| outer membrane protein [Vibrio vulnificus YJ016]
Length = 348
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 56/152 (36%), Gaps = 12/152 (7%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPMLQ 97
+ E + L T V R D + + V+ + K++ L
Sbjct: 189 QLEQQLDYVLSHTRCVPPRDEDAFRFQLDIVNELYDILNIDNQFAVNSAEINPKYMGHLA 248
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
A IL + + + + H D+ G N ++ +RA+ +K YL I+
Sbjct: 249 KAANILREHTALTLTVTGHADATGNEAYNEKLAMDRAEQVKRYLAI-FGLDPNRITTYSL 307
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
K P+ ++ R N+R+ I+I N +
Sbjct: 308 GEKLPLFDGESAAVRLTNRRVSIEIQSPANTE 339
>gi|317048541|ref|YP_004116189.1| DotU family type IV / VI secretion system protein [Pantoea sp.
At-9b]
gi|316950158|gb|ADU69633.1| type IV / VI secretion system protein, DotU family [Pantoea sp.
At-9b]
Length = 404
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 4/134 (2%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ + VS IP + + + +L +A+ + TV
Sbjct: 258 QRLNDVIAAGQLEVSDGAFGSKVIIPADKLFAADGTVVNQVGRALLAHVASAMKTVKGTV 317
Query: 111 IAIQSHTDSI--GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ +S G ++ S RA I L + ++ + G P+ ND+
Sbjct: 318 LVSVYTDNSPVDGRFVSSYEFSFARARAIAQLLNPQ-LAEGHSVKAEGRGDSNPLLPNDS 376
Query: 169 KVGRQNNQRIEIQI 182
R N+R+EI +
Sbjct: 377 NENRARNRRVEITL 390
>gi|34556728|ref|NP_906543.1| motility protein MotB [Wolinella succinogenes DSM 1740]
gi|34482442|emb|CAE09443.1| MOTB PROTEIN [Wolinella succinogenes]
Length = 255
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEK-KFLPMLQLIATI 102
+S+ E + + D IP + F + + + L+ A
Sbjct: 93 ASMITEYSEMTKISDGPAVKMEEAEDGFILSIPSELLFESGSATITNKEGILFLKRTALE 152
Query: 103 LNK-FPSTVIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+NK I + HTD+ T K+N +S R + L++ V+ R IS G
Sbjct: 153 INKLSNDMHIKVIGHTDNDRLRPTATYKDNWELSIARGVNVAKMLLEERVNPAR-ISAGG 211
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFP----RGNIKK 190
P+ +N T G+ N+R+++ F IKK
Sbjct: 212 NGEFDPVASNATPEGKAKNRRVDLYFFSVSKNEEEIKK 249
>gi|89076780|ref|ZP_01163047.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
gi|89047578|gb|EAR53193.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
Length = 139
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L ++ LQ + L ++PS + +T + G+ NL +S++RA + L+
Sbjct: 26 DSKHLTEEDKHRLQPMIQRLTRYPSATAEVTGYTSNTGSEAYNLKLSEKRAKNVAE-LLS 84
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ V+ I+ +G I TNDT GR N+R+EI
Sbjct: 85 QYVADANQITSKGIGEANSIATNDTAKGRAENRRVEIY 122
>gi|37679367|ref|NP_933976.1| sodium-type flagellar protein MotY precursor [Vibrio vulnificus
YJ016]
gi|37198110|dbj|BAC93947.1| sodium-type flagellar protein MotY precursor [Vibrio vulnificus
YJ016]
Length = 295
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ + L K L IA + ++ + ++TDS + +S+
Sbjct: 182 ISFTILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSER 241
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ ++ Y G+ +R I V+G+ + PI N T +G+ N+R+ I +
Sbjct: 242 RAESLRDYFKALGLPEDR-IQVQGYGKRRPIADNATPIGKDKNRRVVISL 290
>gi|329954289|ref|ZP_08295383.1| OmpA family protein [Bacteroides clarus YIT 12056]
gi|328527995|gb|EGF54981.1| OmpA family protein [Bacteroides clarus YIT 12056]
Length = 224
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 77/222 (34%), Gaps = 40/222 (18%)
Query: 2 IKELGLSMFIMTTISGCGLASREKK---------------------------KVFLHKSN 34
+K + + CG + K +
Sbjct: 4 MKITAFLLSGAILLGSCGTMNNTTKGGIIGGGSGAAAGAIIGGLFGKGKGAAIGAAVGAA 63
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSF-VSEVFLEK 90
G +DK + +++ + V + + + + F + L
Sbjct: 64 VGTGAGVAIGHKMDK-KAAEAAKIEGAQVEVVKDANNLDAVKVTFDSGILFAFNSSTLSN 122
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L+ +A IL + +T IAI HTD +GT + N+ +S+ RA +++YL GVS ++
Sbjct: 123 DAKASLRDLAKILKEDTTTDIAIIGHTDKVGTYEANMKVSKNRAYAVENYLQDCGVSPSQ 182
Query: 151 FISVRGFAYKYPIDTNDTKVGR--QNNQRIEIQIFPRGNIKK 190
F V G Y N+ N+R+ I ++ + K
Sbjct: 183 FKQVEGVGY------NEYDESLSAAQNRRVVIFMYASEQMIK 218
>gi|317009174|gb|ADU79754.1| flagellar motor protein MotB [Helicobacter pylori India7]
Length = 257
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 66/208 (31%), Gaps = 33/208 (15%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIGTLKNNL---LISQERADVIKSYLIQRGVSSNRFI 152
+ IA I+ K P V I ++ TD+ K ++ + + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDNTPLAKTRFKSHYELAANRAYRVMKVLMQYGVNPNQL 202
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
S + PI ND+ R N R+EI
Sbjct: 203 SFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|147886295|gb|ABQ52380.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin]
Length = 229
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 102 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 161
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 162 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 217
>gi|19881377|gb|AAM00931.1|AF491823_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + +L I + + S + + +TD IG+ NL +SQ RAD
Sbjct: 227 SDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRRADT 286
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +YL+ + + IS G+ P+ DT GR +++R+EI +
Sbjct: 287 VANYLVSK-GVAQEVISSTGYGEANPVTGAKCDTVKGRKALIACLADDRRVEISV 340
>gi|229846196|ref|ZP_04466308.1| Outer membrane protein P5 [Haemophilus influenzae 7P49H1]
gi|229811200|gb|EEP46917.1| Outer membrane protein P5 [Haemophilus influenzae 7P49H1]
Length = 359
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 242 SDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 301
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 302 VANYFVAK-GVAADAISATGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAV 355
>gi|19881365|gb|AAM00925.1|AF491817_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + +L I + + S + + +TD IG+ NL +SQ RAD
Sbjct: 227 SDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRRADT 286
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +YL+ + + IS G+ P+ DT GR +++R+EI +
Sbjct: 287 VANYLVSK-GVAQEVISSTGYGEANPVTGAKCDTVKGRKALIACLADDRRVEISV 340
>gi|310767218|gb|ADP12168.1| outer membrane protein A [Erwinia sp. Ejp617]
Length = 355
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + +TD IG+ + N +S++RA
Sbjct: 228 SDVLFTFNKANLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRIGSEQYNQKLSEKRA 287
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YL+ + + IS RG P+ N D+ GRQ ++R+EIQ+
Sbjct: 288 QSVVDYLVSK-GIPSNKISARGEGESNPVTGNTCDSVKGRQALIDCLSPDRRVEIQV 343
>gi|298374715|ref|ZP_06984673.1| OmpA family protein [Bacteroides sp. 3_1_19]
gi|298269083|gb|EFI10738.1| OmpA family protein [Bacteroides sp. 3_1_19]
Length = 658
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 45/137 (32%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + L + +LN P+ I + +HTD GT + N ++Q R
Sbjct: 516 VVIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDRKGTDQYNERLAQRR 575
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND---------------TKV-------- 170
A + YLI + +G+ P N T+
Sbjct: 576 AQSVVDYLIAG-GIEAARLEAKGYGESVPKTINKKMAKQFDFLKEGDVLTEEFILALPPE 634
Query: 171 ----GRQNNQRIEIQIF 183
Q N+R E ++
Sbjct: 635 QQEIADQINRRTEFKVL 651
>gi|330446461|ref|ZP_08310113.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490652|dbj|GAA04610.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 166
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 61/177 (34%), Gaps = 20/177 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQD 60
+K+ + ++ +GC DT + + D + +L+
Sbjct: 1 MKKSLFVLCLLALFTGCST--------------DTYVSQENINKFDDLTVKKFLIAELKP 46
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I I + H F + L+ + + L ++ I I HTD
Sbjct: 47 KAIA---EDKKIYLSLISHFDF-DKAVLKPEDIKELDDFIAKIHSLSG-DILIAGHTDYQ 101
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ N +S R+ I+SYL R S+ V+ F K PI + N+R
Sbjct: 102 GSDSYNEALSLRRSHAIESYLKARIDESHYQFEVKYFGEKNPIVKGHSLKANALNRR 158
>gi|207092500|ref|ZP_03240287.1| flagellar motor protein MotB [Helicobacter pylori HPKX_438_AG0C1]
Length = 260
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 70/209 (33%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P + F + + + + L
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSSLLFENATSDAINQDMMLYL 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD K++ ++ RA + LI +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLI-QYGVDPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|330814653|ref|YP_004362828.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3]
gi|327374645|gb|AEA65996.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3]
Length = 421
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 61/156 (39%), Gaps = 7/156 (4%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKK 91
++ + + ++ + ++ + + + T + + +V +
Sbjct: 265 ADQSAQASSPIDRLGAALGEQLRDEIAAGNVELIKDTAADTVTLRFNGMYASGDVTVAPW 324
Query: 92 FLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNL----LISQERADVIKSYLIQRGV 146
+ ++ + + P+T + I +TD++ + +S RA + GV
Sbjct: 325 WASVMASVGRAIASSPATTHVLITGYTDNLPASPAHQGSNHALSTARAQQVAQIFAVAGV 384
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
R ISV G + P+ N +K GR N+R+E+ +
Sbjct: 385 PKER-ISVVGQSDADPLADNVSKEGRARNRRVEVTV 419
>gi|307727249|ref|YP_003910462.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307587774|gb|ADN61171.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 219
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 57/152 (37%), Gaps = 13/152 (8%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
E+ L + + I+ + ++ L+ + +L+ +A
Sbjct: 61 ETQRRKTLEEALAGPLAAGRVTLVNGRIGIS---GNVLFALNSDQLQPQGRDLLKSLAGP 117
Query: 103 LNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRFIS 153
L+ + ++ + TD + +N +S +RA + LI GV + +
Sbjct: 118 LSAYLRANDEMLMVSGFTDDQRLREGNRRFADNWELSAQRALTVTRALIDAGVPVSSVFA 177
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
F P+ +N + GR N+R+EI PR
Sbjct: 178 AA-FGSGQPVSSNADEQGRARNRRVEIAPVPR 208
>gi|256112172|ref|ZP_05453093.1| flagellar motor protein MotB [Brucella melitensis bv. 3 str. Ether]
gi|265993598|ref|ZP_06106155.1| flagellar motor protein MotB [Brucella melitensis bv. 3 str. Ether]
gi|262764468|gb|EEZ10500.1| flagellar motor protein MotB [Brucella melitensis bv. 3 str. Ether]
Length = 366
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 9/170 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD---MITCYIPV 78
+ KK + D+ G A + + VV G +T +
Sbjct: 199 QAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVVPVEGGVMSQLTDKVDY 258
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERAD 135
+ + + + + ML+ IA ++ + P + I HTD+ +N +S RA
Sbjct: 259 GMFTIGSAKPDARVVQMLERIAQVIARQPG-EVIISGHTDARPFKSATYDNWRLSSARAQ 317
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L++ G+ R + V G+A + P + ND N+RI+I I +
Sbjct: 318 MAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNA--AENRRIDIFIKSK 365
>gi|209550830|ref|YP_002282747.1| hypothetical protein Rleg2_3254 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536586|gb|ACI56521.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 343
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + L + + +A L + P +
Sbjct: 205 EILSDRENIRIVGDRFVFQ-SEVLFPSGGADLNPEGQTEMGKLAAALLDLAKEIPPEINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI +GV ++R ++ GF PI
Sbjct: 264 VLRVDGHTDNVPLAGTGRYRDNWELSSARAISVVKFLIAQGVPADRLVAA-GFGEFQPIA 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
+T R N+RIE+++ +
Sbjct: 323 PGETPDARATNRRIELKLTEK 343
>gi|94500736|ref|ZP_01307265.1| chemotaxis MotB protein [Oceanobacter sp. RED65]
gi|94427058|gb|EAT12039.1| chemotaxis MotB protein [Oceanobacter sp. RED65]
Length = 226
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 62/194 (31%), Gaps = 18/194 (9%)
Query: 6 GLSMFIMTTISGCGLASREKKK-VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD---- 60
+++ + + ++ + K L + + ++ + + E +
Sbjct: 31 AITLLLAFFVMILSVSDLNQGKIESLKEGLAGVLTGEKVVTPFSDIKKELDQIINQHNMQ 90
Query: 61 TGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHT 117
+ V + + + + LP+L + ++ + ++ ++ HT
Sbjct: 91 ENVSVVIDKKGVKVEFSDFSLYDSGSAAIRPQALPVLNEVTKVIESSVHKTHLVEVEGHT 150
Query: 118 DSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-----DT 168
D + N +S RA + YL+ + + G+A P
Sbjct: 151 DDVPISTEKFPSNWELSAARASNVVKYLLGK-GVKKEQLKASGYADSRPKSAPIEGQVMD 209
Query: 169 KVGRQNNQRIEIQI 182
R N+R+ I +
Sbjct: 210 AQQRAENRRVVIYV 223
>gi|17988498|ref|NP_541131.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. 16M]
gi|256042871|ref|ZP_05445817.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. Rev.1]
gi|260564108|ref|ZP_05834593.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
16M]
gi|265989306|ref|ZP_06101863.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. Rev.1]
gi|17984289|gb|AAL53395.1| chemotaxis motb protein [Brucella melitensis bv. 1 str. 16M]
gi|260151751|gb|EEW86844.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
16M]
gi|262999975|gb|EEZ12665.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. Rev.1]
Length = 366
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 9/170 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD---MITCYIPV 78
+ KK + D+ G A + + VV G +T +
Sbjct: 199 QAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVVPVEGGVMSQLTDKVDY 258
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERAD 135
+ + + + + ML+ IA ++ + P + I HTD+ +N +S RA
Sbjct: 259 GMFTIGSAKPDARVVQMLERIAQVIARQPG-EVIISGHTDARPFKSATYDNWRLSSARAQ 317
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L++ G+ R + V G+A + P + ND N+RI+I I +
Sbjct: 318 MAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNA--AENRRIDIFIKSK 365
>gi|217032687|ref|ZP_03438173.1| hypothetical protein HPB128_202g21 [Helicobacter pylori B128]
gi|216945617|gb|EEC24268.1| hypothetical protein HPB128_202g21 [Helicobacter pylori B128]
Length = 157
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 5/160 (3%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+ K V S T + E+ Q +V + I
Sbjct: 2 DNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEP---APVVEEKPAIESGTIIASIYFDF 58
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ +++ L I + + ++ +TD G+ + N + +R +K+ L+
Sbjct: 59 DKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVI 117
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ I F P T+ + N+R+++++
Sbjct: 118 K-GVEKDMIKTISFGETKPKCAQKTRECYKENRRVDVKLV 156
>gi|152997425|ref|YP_001342260.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
gi|150838349|gb|ABR72325.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
Length = 272
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 66/162 (40%), Gaps = 5/162 (3%)
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVF 87
+ + + + E++F I V+ D ++ + + F E
Sbjct: 102 AAPPTIEESNSSAVYALLSQVVENQFSGLHASGQISVTESADWVSLELKSGLLFGQGEYD 161
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL---IQR 144
L + + +L L+A +L PS VI ++ +TD + L+ + + + S + +
Sbjct: 162 LTNEAVALLILVANVLKAHPS-VILVEGNTDDLPVNSRRLISNWHLSSLRSSSVVDELVY 220
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ I+ GF+ ++P N RQ N+R+ ++I R
Sbjct: 221 RGVDPKMIAPIGFSSEHPKVRNTNDYARQQNRRVILRISKRE 262
>gi|261867947|ref|YP_003255869.1| Plp4 [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413279|gb|ACX82650.1| Plp4 [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 274
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L K ++ +A L + + + + +TD +G+ N+ +SQ RAD +
Sbjct: 142 DFLFDFDKDTLTVKGREVVDKVAAQLKESKAQEVKVAGYTDRLGSKVYNMDLSQRRADRV 201
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK------VGRQNNQRIEIQ---IFPRGNI 188
K+ LI++G+ I+ G+ + + + + N+R+EI I P+
Sbjct: 202 KNRLIEQGIDVQ--INAVGYGEAHQVQACNNVKSSQLISCLRPNRRVEISSSGITPKDES 259
Query: 189 KK 190
K+
Sbjct: 260 KQ 261
>gi|88798977|ref|ZP_01114558.1| OmpA/MotB [Reinekea sp. MED297]
gi|88778204|gb|EAR09398.1| OmpA/MotB [Reinekea sp. MED297]
Length = 300
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 8/156 (5%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ + + +D I + G + + + + L
Sbjct: 145 QTSATQASVSTELSTELAAQLSSYDRDISITTAADGTTLINIPLTLLFANTNLDLANDAE 204
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGT-------LKNNLLISQERADVIKSYLIQRGV 146
+L ++ +L + P + + H D+ N +S RA + ++LI +GV
Sbjct: 205 TVLTSLSEVLKQHPDRRVQVIGHADARPIVSDLAQTYPTNWELSSARASRVVTFLIDQGV 264
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S +R + G A P+ + N+RIE+QI
Sbjct: 265 SDHRLL-ASGRAANQPVRDGANEEDWSVNRRIEVQI 299
>gi|288926326|ref|ZP_06420250.1| OmpA family protein [Prevotella buccae D17]
gi|288336931|gb|EFC75293.1| OmpA family protein [Prevotella buccae D17]
Length = 684
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + L + +LN+ P+ I + +H D G+++ N +SQ R
Sbjct: 513 VLIDNIFYEFDKANLTPESTKALDELVKLLNENPNVTIELSAHCDYKGSMEYNKRLSQRR 572
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYP---------------------------IDTN 166
A+ + +YL+ + ++ G+ + P +D
Sbjct: 573 AEAVVAYLVG-HGIARDRLTPAGYGKERPKTIRRKVAAKYPWLKEGDVLTEDFIHHLDAG 631
Query: 167 DTKVGRQNNQRIEIQIF 183
++ Q N+R E +
Sbjct: 632 KQEICNQLNRRTEFTVL 648
>gi|113460409|ref|YP_718471.1| peptidoglycan-associated outer membrane lipoprotein (outer membrane
protein P6) [Haemophilus somnus 129PT]
gi|112822452|gb|ABI24541.1| peptidoglycan-associated outer membrane lipoprotein (outer membrane
protein P6) [Haemophilus somnus 129PT]
Length = 135
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ ++ ++ +L + L P++ + ++ H D GT + N+ +
Sbjct: 26 LQQRYNTVYFEFDSYDVQGEYAQILDAHSAYLKSTPASKVLVEGHADERGTPEYNMALGL 85
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
RAD +K++L+ + +S + + P + + N+R
Sbjct: 86 RRADAVKNFLLNK-GVQASQLSTLSYGEEKPAELGHNEAAYSKNRR 130
>gi|19881375|gb|AAM00930.1|AF491822_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + +L I + + S + + +TD IG+ NL +SQ RAD
Sbjct: 227 SDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRRADT 286
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +YL+ + + IS G+ P+ DT GR +++R+EI +
Sbjct: 287 VANYLVSK-GVAQEVISSTGYGEANPVTGAKCDTVKGRKALIACLADDRRVEISV 340
>gi|323495647|ref|ZP_08100718.1| outer membrane protein [Vibrio sinaloensis DSM 21326]
gi|323319282|gb|EGA72222.1| outer membrane protein [Vibrio sinaloensis DSM 21326]
Length = 211
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 76/215 (35%), Gaps = 43/215 (20%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH--------------------------KSND 35
+K + + +S CG+A+ ++ + L
Sbjct: 1 MKNKLIPITTALFLS-CGVANADELQDPLALYCNQDGVEFEHSIQVHPSIKVHNHQGQFQ 59
Query: 36 TDIVNKRFGSSLDKAEDEFQM----------QLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+VN LD E L ++ I S ++I +
Sbjct: 60 QVVVNTDETPVLDWLSKELAQIGLSLNCSEYLLTNSAIEFSNSPEVIA----RVYFNFDD 115
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L ++ +L + L + + I + HTD++G N + R+ ++ YL++RG
Sbjct: 116 STLTQQSEYVLTRVMR-LIESQARNIELAGHTDNVGDAGYNFSLGLRRSKAVEDYLVERG 174
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
V + R I+ F P N + R+ N+R+E+
Sbjct: 175 VDTKR-ITTTSFGENKPFVDNMSDENRKLNRRVEV 208
>gi|320156881|ref|YP_004189260.1| sodium-type flagellar protein motY [Vibrio vulnificus MO6-24/O]
gi|319932193|gb|ADV87057.1| sodium-type flagellar protein motY precursor [Vibrio vulnificus
MO6-24/O]
Length = 254
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ + L K L IA + ++ + ++TDS + +S+
Sbjct: 141 ISFTILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSER 200
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ ++ Y + + I V+G+ + PI N T +G+ N+R+ I +
Sbjct: 201 RAESLRDYF-KALGLTEDRIQVQGYGKRRPIADNATPIGKDKNRRVVISL 249
>gi|119502996|ref|ZP_01625081.1| conserved hypothetical OmpA family protein [marine gamma
proteobacterium HTCC2080]
gi|119461342|gb|EAW42432.1| conserved hypothetical OmpA family protein [marine gamma
proteobacterium HTCC2080]
Length = 297
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 11/185 (5%)
Query: 5 LGLSMFIMTTISGCGL-------ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+ I + G G A+ ++ +V +T + LDK + ++
Sbjct: 100 TAAAGPIGFVLGGIGADWMVNQVAAADELQVTEQALLNTQADLALAYTELDKVNADLEIV 159
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
++ + + + + ++ L L L+A+ L + + + I+ +
Sbjct: 160 QEEQQRFAKLALEQLQLEM---LFKTNDSRLTAGGEDRLSLLASFLTRNENLSVRIEGYA 216
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D G +N+ +S RA+ + LI GV++NR +V + + ++R
Sbjct: 217 DPRGDSASNMALSLARAERVAQQLIDSGVAANRM-TVSAHGESQALAGDGDIDAYALDRR 275
Query: 178 IEIQI 182
+ I +
Sbjct: 276 VHIAL 280
>gi|19881369|gb|AAM00927.1|AF491819_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + +L I + + S + + +TD IG+ NL +SQ RAD
Sbjct: 227 SDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRRADT 286
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +YL+ + + IS G+ P+ DT GR +++R+EI +
Sbjct: 287 VANYLVSK-GVAQEVISSTGYGEANPVTGAKCDTVKGRKALIACLADDRRVEISV 340
>gi|58200723|gb|AAW66611.1| hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + +L I + + S + + +TD IG+ NL +SQ RAD
Sbjct: 227 SDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRRADT 286
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +YL+ + + IS G+ P+ DT GR +++R+EI +
Sbjct: 287 VANYLVSK-GVAQEVISSTGYGEANPVTGAKCDTVKGRKALIACLADDRRVEISV 340
>gi|51246716|ref|YP_066600.1| peptidoglycan-associated lipoprotein [precursor] [Desulfotalea
psychrophila LSv54]
gi|50877753|emb|CAG37593.1| related to peptidoglycan-associated lipoprotein [Precursor]
[Desulfotalea psychrophila LSv54]
Length = 177
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 62/177 (35%), Gaps = 12/177 (6%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L + T++GC + ++ + E+ + GI
Sbjct: 11 ALVGLSVLTLAGCTCVKP-------GEECADPVLMTEVVEEVVVIEEPLDTVVVPLGIGE 63
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+R + + + + P +Q+ A ++ ++ I+ +TDS GT +
Sbjct: 64 ARTTEG----MLPVYFNFDSSAVGEDQKPRVQVNADFMDANVDYMVRIEGNTDSRGTDEY 119
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N+ + + RA + YL+ ++ + + + ++ N+R + +
Sbjct: 120 NMALGERRALSAQQYLMDL-GVEEARLTTVSYGKERLLLNGQSEDAWSQNRRCDFVV 175
>gi|150010324|ref|YP_001305067.1| outer membrane protein OmpA family protein [Parabacteroides
distasonis ATCC 8503]
gi|255012413|ref|ZP_05284539.1| outer membrane protein OmpA family protein [Bacteroides sp. 2_1_7]
gi|262382396|ref|ZP_06075533.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B]
gi|149938748|gb|ABR45445.1| outer membrane protein OmpA family protein [Parabacteroides
distasonis ATCC 8503]
gi|262295274|gb|EEY83205.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B]
Length = 658
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 45/137 (32%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + L + +LN P+ I + +HTD GT + N ++Q R
Sbjct: 516 VVIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDRKGTDQYNERLAQRR 575
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND---------------TKV-------- 170
A + YLI + +G+ P N T+
Sbjct: 576 AQSVVDYLIAG-GIEAARLEAKGYGESVPKTINKKMAKQFDFLKEGDVLTEEFILALPPE 634
Query: 171 ----GRQNNQRIEIQIF 183
Q N+R E ++
Sbjct: 635 QQEIADQINRRTEFKVL 651
>gi|49182352|gb|AAT57678.1| OmpA [Pasteurella multocida]
Length = 348
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 62/162 (38%), Gaps = 22/162 (13%)
Query: 45 SSLDKAEDEFQMQLQ----------DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
D +F+ + + V + + L+
Sbjct: 189 EYADGQYADFRPDIGSVTAGLSYRFGQSVYVPEVVSKTFTLNTDVTFGFDKADLKPAAQN 248
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+L I + + S +A+ +TD +G+ NL +SQ RAD + +YL+ + + IS
Sbjct: 249 VLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISA 307
Query: 155 RGFAYKYPIDTN--DTKVGR-------QNNQRIEIQIFPRGN 187
G P+ N D+ GR +++R+EI + +GN
Sbjct: 308 TGRGEANPVTGNKCDSVKGRKALIACLADDRRVEIAV--KGN 347
>gi|301308400|ref|ZP_07214354.1| OmpA family protein [Bacteroides sp. 20_3]
gi|300833870|gb|EFK64486.1| OmpA family protein [Bacteroides sp. 20_3]
Length = 658
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 45/137 (32%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + L + +LN P+ I + +HTD GT + N ++Q R
Sbjct: 516 VVIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDRKGTDQYNERLAQRR 575
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND---------------TKV-------- 170
A + YLI + +G+ P N T+
Sbjct: 576 AQSVVDYLIAG-GIEAARLEAKGYGESVPKTINKKMAKQFDFLKEGDVLTEEFILALPPE 634
Query: 171 ----GRQNNQRIEIQIF 183
Q N+R E ++
Sbjct: 635 QQEIADQINRRTEFKVL 651
>gi|259415649|ref|ZP_05739570.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259348879|gb|EEW60641.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 136
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 45/139 (32%), Gaps = 6/139 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D AE + G V R G + + LQ N P
Sbjct: 3 DGAEGYMTTHMTPDGKPVCRRGQLCGMMPTDQFFATDGSTVNAAGRKRLQEWFR--NAMP 60
Query: 108 STV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
T + HTDS + + N+ +SQ RAD + R VR + + P N
Sbjct: 61 GTRSFVVAGHTDSRASDEYNMALSQRRADAVAQIGRS---VGARIKDVRAYGERSPRVPN 117
Query: 167 DTKVGRQNNQRIEIQIFPR 185
N+R+EI R
Sbjct: 118 RGAANLAQNRRVEIYCIRR 136
>gi|254561554|ref|YP_003068649.1| flagellar motor protein MotB [Methylobacterium extorquens DM4]
gi|254268832|emb|CAX24793.1| flagellar motor protein MotB [Methylobacterium extorquens DM4]
Length = 337
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 57/160 (35%), Gaps = 14/160 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + + V +GD + L+ + P L
Sbjct: 181 AQRVQELARYRSDFFGRLRQVI-GSRTDVRIVGDRFVLQ-SEVLFAAGSAALKPEAGPEL 238
Query: 97 QLIATIL----NKFPS---TVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRG 145
IA + + P+ V+ + HTD+ +N +S RA + YL +G
Sbjct: 239 DRIAGAILDIAREIPADIPWVLRVDGHTDARPIQSAQFPSNWALSASRAIAVVQYLRSKG 298
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ R + F P+D+ ++ N+RIE+++ R
Sbjct: 299 LPPQRLL-AGAFGEFQPLDSGTSEEAYSRNRRIEMKLTER 337
>gi|6119896|gb|AAF04276.1|AF181881_2 PAL [Helicobacter pylori]
Length = 157
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 5/160 (3%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+ K V S T + E+ Q +V + I
Sbjct: 2 DNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEP---APVVEEKPAVESGTIIASIYFDF 58
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ +++ L I + + ++ +TD G+ + N + +R +K+ L+
Sbjct: 59 DKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVI 117
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ I F P T+ + N+R+++++
Sbjct: 118 K-GVEKDMIKTISFGETKPKCAQKTRECYKENRRVDVKLV 156
>gi|585614|sp|P38368|OMP52_HAEIN RecName: Full=Outer membrane protein P5; Short=OMP P5; Flags:
Precursor
gi|388301|gb|AAA03346.1| outer membrane protein P5 [Haemophilus influenzae]
gi|301169904|emb|CBW29508.1| outer membrane protein A (3a;II*;G;d) [Haemophilus influenzae
10810]
Length = 353
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 236 SDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 295
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 296 VANYFVAK-GVAADAISATGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAV 349
>gi|332673379|gb|AEE70196.1| flagellar motor protein MotB [Helicobacter pylori 83]
Length = 255
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 72/209 (34%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD K++ ++ RA + LI + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLI-QYGVNPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|325577896|ref|ZP_08148129.1| outer membrane protein P5 [Haemophilus parainfluenzae ATCC 33392]
gi|325160326|gb|EGC72453.1| outer membrane protein P5 [Haemophilus parainfluenzae ATCC 33392]
Length = 366
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I + + + +A+ +TD IG NL +SQ RAD
Sbjct: 249 SDVTFAFGKANLKPQAKATLDGIYGEIAQINNANVAVAGYTDRIGKDAPNLKLSQRRADS 308
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +YL+ + + IS G P+ T D GR ++R+EI +
Sbjct: 309 VANYLVAK-GVPAQNISAVGHGKANPVTGSTCDAVKGRKALIACLAPDRRVEIAV 362
>gi|145635014|ref|ZP_01790720.1| outer membrane protein P5 [Haemophilus influenzae PittAA]
gi|145267622|gb|EDK07620.1| outer membrane protein P5 [Haemophilus influenzae PittAA]
Length = 355
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 238 SDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 297
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 298 VANYFVAK-GVAADAISATGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAV 351
>gi|312963035|ref|ZP_07777521.1| OmpA/MotB [Pseudomonas fluorescens WH6]
gi|311282804|gb|EFQ61399.1| OmpA/MotB [Pseudomonas fluorescens WH6]
Length = 163
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 53/137 (38%), Gaps = 4/137 (2%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKF 106
L+ G ++ G + V F S+V L ++Q I L
Sbjct: 28 KGLTPAQVAVLKQQGFELTDEGW--AFGLSGKVLFGSDVETLNPPSTEIVQRIGKALLGV 85
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ + HTD+ G N +S RA + + ++ + + +RG P+ +N
Sbjct: 86 GIERVRVDGHTDASGKEIYNQQLSLRRAKSV-ATVLTGVGMKEQNVQLRGLGSGEPVASN 144
Query: 167 DTKVGRQNNQRIEIQIF 183
DT GR N+R+ I +
Sbjct: 145 DTAAGRTENRRVSIVVI 161
>gi|119470009|ref|ZP_01612814.1| putative chemotaxis protein [Alteromonadales bacterium TW-7]
gi|119446719|gb|EAW27992.1| putative chemotaxis protein [Alteromonadales bacterium TW-7]
Length = 319
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 67/182 (36%), Gaps = 10/182 (5%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIV-----NKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
+ G + E+ L ++T + K S L K + +++D +
Sbjct: 89 LLYGESINKEEQGPELLDGQSETSNIQQKYLGKPLDSLLTKLQSALIDEIRDGEANLELN 148
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D + + + F S + + I + I ++ +TD T+KN +
Sbjct: 149 QDWLIIELSSGMLFSSGSAVAHSRAKQVVKIVKDIIAPVDNYIRVRGYTDDE-TIKNEIF 207
Query: 129 ISQERADVIKSYLI----QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
S V ++ I + ++ +++ G+ P NDT GR N+++ I +
Sbjct: 208 RSNWELSVARATSILVELEALGINSARMAIEGYGQYSPFAPNDTDEGRAENRKVVIALSK 267
Query: 185 RG 186
G
Sbjct: 268 YG 269
>gi|127512084|ref|YP_001093281.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
gi|126637379|gb|ABO23022.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 234
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 58/153 (37%), Gaps = 5/153 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ + ++++ ++ + + QD + S + + +
Sbjct: 87 APEGELLSFCEPAAQKAQYGQARQNKQDEQVKRSIGESNVV----RVYFAFASAEVSIDQ 142
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
P L + L+ + + HTD+IG+ NL +S++RA+ +K +Q +
Sbjct: 143 WPQLAKVRDFLSA-SDARLTLVGHTDNIGSEAVNLSLSRQRAERVKQIFVQDYGVKAERL 201
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
S+ P+ N R N+R+E + R
Sbjct: 202 SIVAKGASQPVTDNFGPGERALNRRVEFIVEAR 234
>gi|227824065|ref|YP_002828038.1| putative outer membrane protein, OmpA/MotB domain protein
[Sinorhizobium fredii NGR234]
gi|227343067|gb|ACP27285.1| putative outer membrane protein, OmpA/MotB domain protein
[Sinorhizobium fredii NGR234]
Length = 189
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 55/146 (37%), Gaps = 3/146 (2%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ DT + + + + ++ ++ +V D I L+
Sbjct: 36 TTDTAALEEPTAAPITGQTNDPAPGFEN--VVAGSEEDFILNVGRRTYFTQDSATLDAVA 93
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L AT LN ++ +Q D G+ +SQ+RAD +YL+ +GV NR
Sbjct: 94 KATLDKQATWLNSNQRWLVKLQGFADDSGSASKMATLSQQRADAAMAYLVSKGVDPNRLW 153
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRI 178
+G+ + + + N+R+
Sbjct: 154 -AKGYGNDREVRDCTDRSCKVQNRRV 178
>gi|109947291|ref|YP_664519.1| flagellar motor protein MotB [Helicobacter acinonychis str. Sheeba]
gi|109714512|emb|CAJ99520.1| flagellar motor rotation protein MotB [Helicobacter acinonychis
str. Sheeba]
Length = 253
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 74/209 (35%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL---------------------------HKSNDTDI 38
LS+ + I+ +++ K KV +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGQEEEQT 82
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
++ + E + + + G V+ +I +P ++ F + + + + +
Sbjct: 83 ASESSKPASQNTESKITITRKGEGSVLEQIDQGSILKLPSNLLFENAVSDAINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD+ K++ ++ RA + ++ +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDNTPLIKTRFKSHYELAANRAYRVMK-VLMQYGVDPDQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|312148404|gb|ADQ31063.1| outer membrane protein [Borrelia burgdorferi JD1]
Length = 381
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + + +K + LIA +L KF I I+ HT+ G + +S++RA I +Y
Sbjct: 278 FYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSEKRARAIGNY 337
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
LI+ V I +G+ + P + + + N+R+EI I
Sbjct: 338 LIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEITILNN 381
>gi|241113057|ref|YP_002972892.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240861265|gb|ACS58931.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 184
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 49/161 (30%), Gaps = 16/161 (9%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C + + G + + D I
Sbjct: 29 CSTTDIASVEEPAAAPMTGQTNDPAPGFE---------------NVAMGSEEDFILNVGR 73
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L+ + L A LN+ PS ++ +Q D G+ +SQ+RAD
Sbjct: 74 RIYFKQDSATLDPVAMATLDNQAAWLNRNPSWLLKLQGFADDSGSAAKMETLSQKRADAA 133
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+YL+ + R + +G+ + + + N+R+
Sbjct: 134 MAYLVSK-GVDARRMWAKGYGNDREVRDCTERSCKVQNRRV 173
>gi|239906204|ref|YP_002952943.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
gi|239796068|dbj|BAH75057.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
Length = 250
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 41/122 (33%), Gaps = 6/122 (4%)
Query: 65 VSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS---- 119
+S + + + F L ++ ++ + ++ + +I I+ H D+
Sbjct: 117 ISSDDVGVLLRLQNGMLFAPGSAELTEQAKKLMAEVVDVMKTYNVFLI-IRGHADAAEAA 175
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G +N +S RA +I G + + P+ N+R+E
Sbjct: 176 KGHFASNWELSGARAAAAARAVIAGGGIQASRVRAVAYGDSRPLMPETNPEAAAANRRVE 235
Query: 180 IQ 181
Sbjct: 236 FY 237
>gi|332293191|ref|YP_004431800.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332171277|gb|AEE20532.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 236
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ +L K P + I HTD++G+ K+N + + +K YL R I+
Sbjct: 151 ELKALLKKHPEKKVTILGHTDNVGSSKDNFDQGLKMSRQVKWYLTARRGIPRHKITATSR 210
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
+ PI N + GRQ N RIEI +
Sbjct: 211 GEEEPIANNKSLSGRQENNRIEIIV 235
>gi|145637084|ref|ZP_01792747.1| Outer membrane protein P5 [Haemophilus influenzae PittHH]
gi|145269738|gb|EDK09678.1| Outer membrane protein P5 [Haemophilus influenzae PittHH]
Length = 358
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 241 SDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 300
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 301 VANYFVAK-GVAADAISATGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAV 354
>gi|297380015|gb|ADI34902.1| flagellar motor protein MotB [Helicobacter pylori v225d]
Length = 255
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 72/209 (34%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD K++ ++ RA + LI + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDTPLIKTRFKSHYELAANRAYRVMKVLI-QYGVNPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|289668951|ref|ZP_06490026.1| OmpA family protein [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 200
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 38/128 (29%), Gaps = 7/128 (5%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ G + L+ +L+ +A L + P + + HTD
Sbjct: 74 VQTEGDGRSTVRLASASMFPSGSAELDADQTRLLERVAAALEQVPG-RVVVVGHTDDQPV 132
Query: 123 LKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQR 177
S RA + + L R + G PI R N+R
Sbjct: 133 RSLRFKDNFALSARRAQSVGAVLAAGLRD-PRRVQTSGAGDSQPIALPPQLPGNRARNRR 191
Query: 178 IEIQIFPR 185
+EI + P
Sbjct: 192 VEILLIPE 199
>gi|251792474|ref|YP_003007200.1| Plp4 [Aggregatibacter aphrophilus NJ8700]
gi|247533867|gb|ACS97113.1| Plp4 [Aggregatibacter aphrophilus NJ8700]
Length = 278
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L +K ++ +A L + + + + +TD +G+ N+ +SQ RA+ +
Sbjct: 142 DFLFDFDKDTLTEKGKEVVDKVAAQLKESKAQEVKVAGYTDRLGSESYNMDLSQRRANRV 201
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN------NQRIEI 180
K+ L ++GV + IS G + + + G + N+R+EI
Sbjct: 202 KARLTEQGVDAQ--ISAVGHGEAHQVKACSNEKGNKLISCLRPNRRVEI 248
>gi|229523201|ref|ZP_04412608.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae TM
11079-80]
gi|229339564|gb|EEO04579.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae TM
11079-80]
Length = 294
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ V L K L IA + ++ + ++TDS T N+ +S++RA+ +
Sbjct: 191 TSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAE-VLREYF 249
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I V+G+ + PID N + +G+ N+R+ I +
Sbjct: 250 KSIGLPEDRIQVQGYGKRRPIDDNASPIGKDKNRRVVISL 289
>gi|217032506|ref|ZP_03437997.1| hypothetical protein HPB128_180g5 [Helicobacter pylori B128]
gi|216945784|gb|EEC24407.1| hypothetical protein HPB128_180g5 [Helicobacter pylori B128]
Length = 247
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 72/214 (33%), Gaps = 35/214 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P + F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD+ K++ ++ RA + LI +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLI-QYGVDPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S + PI ND+ R N R+EI R
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSNR 235
>gi|124002133|ref|ZP_01686987.1| outer membrane protein OmpA family [Microscilla marina ATCC 23134]
gi|123992599|gb|EAY31944.1| outer membrane protein OmpA family [Microscilla marina ATCC 23134]
Length = 617
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + KK LP + + T L P I + HTD +G+ NN+ +SQ+RA+V+
Sbjct: 509 VFFMYKKAEMHKKSLPAAKALLTFLKNNPGVSIEVSGHTDDVGSNSNNVALSQQRANVVY 568
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++L+ +G+ R + +G+ K PI N+T R N+R + ++
Sbjct: 569 NWLVSKGIEKERLVK-KGYGAKVPIIPNETNYARIVNRRTDFRVVS 613
>gi|27366370|ref|NP_761898.1| sodium-type flagellar protein motY [Vibrio vulnificus CMCP6]
gi|27362571|gb|AAO11425.1| Sodium-type flagellar protein motY precursor [Vibrio vulnificus
CMCP6]
Length = 293
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ + L K L IA + ++ + ++TDS + +S+
Sbjct: 180 ISFTILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSER 239
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ ++ Y + + I V+G+ + PI N T +G+ N+R+ I +
Sbjct: 240 RAESLRDYF-KALGLTEDRIQVQGYGKRRPIADNATPIGKDKNRRVVISL 288
>gi|229844879|ref|ZP_04465017.1| outer membrane protein P5 [Haemophilus influenzae 6P18H1]
gi|229812260|gb|EEP47951.1| outer membrane protein P5 [Haemophilus influenzae 6P18H1]
Length = 355
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L + +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 238 SDVTFAFGKANLKPQAQATLNSVYGEISQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 297
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 298 VANYFVAK-GVAADAISATGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAV 351
>gi|188527339|ref|YP_001910026.1| flagellar motor protein MotB [Helicobacter pylori Shi470]
gi|188143579|gb|ACD47996.1| flagellar motor protein MotB [Helicobacter pylori Shi470]
Length = 255
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 65/208 (31%), Gaps = 33/208 (15%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIGTLKNNL---LISQERADVIKSYLIQRGVSSNRFI 152
+ IA I+ K P V I ++ TD K ++ + + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDTPLDKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL 202
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
S + PI ND+ R N R+EI
Sbjct: 203 SFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|77459872|ref|YP_349379.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77383875|gb|ABA75388.1| phosphate ABC transporter substrate-binding protein, PhoT family
[Pseudomonas fluorescens Pf0-1]
Length = 444
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 50/147 (34%), Gaps = 8/147 (5%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
N ++ + + +SR +T L+ K L
Sbjct: 303 AANGFIAQTVQAIAVTPNALMPEGYQSLSRHAQRLTVNFR---FEEGSASLDNKARQDLA 359
Query: 98 LIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ + + + D+ L+S+ RA ++ L++ GV VR
Sbjct: 360 RVFDYIKHHDKTDRAVTLVGFGDAKDDPARADLLSKLRAMAVRRELVKNGVV---LREVR 416
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
GF P+ TN GR N+R+E+ +
Sbjct: 417 GFGALMPVATNSGDEGRIKNRRVEVWV 443
>gi|91978797|ref|YP_571456.1| hypothetical protein RPD_4338 [Rhodopseudomonas palustris BisB5]
gi|91685253|gb|ABE41555.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 341
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 13/159 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + + + +GD + L + L
Sbjct: 186 AQRVQELSRYRSEFFGRLR-AILGDRPDIRIVGDRFVFQ-SEVFFDTGQALLLPEGRAEL 243
Query: 97 QLIATIL----NKFP---STVIAIQSHTDSI---GTLKNNLLISQERADVIKSYLIQRGV 146
+A L K P + V+ + HTD G K+N +S RA + YL+ GV
Sbjct: 244 DKLAPALTELDKKIPPEIAWVLRVDGHTDRRPITGAFKSNWELSSARAISVVQYLVSLGV 303
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ R ++ GFA P+D +T + N+RIE+++ R
Sbjct: 304 PAQRLVAA-GFAEFQPLDIANTDDAYKRNRRIELKLTER 341
>gi|237800676|ref|ZP_04589137.1| OmpA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331023535|gb|EGI03592.1| OmpA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 446
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 59/155 (38%), Gaps = 11/155 (7%)
Query: 33 SNDTDIVNKRFG---SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
S D + R G ++ + + Q+ ++R D ++ L+
Sbjct: 297 SADGQAIVARSGFVAQTVQALKVQPTAQMPADYQALTRKADRLSVNFR---FAQGSARLD 353
Query: 90 KKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
K L+ +A L + + D+ L+S+ RA ++ L++ GV+
Sbjct: 354 NKAQQDLKRVADYLKAQDKLDQHVTLVGFGDAKSDPARATLLSRLRAMAVRRELLKSGVT 413
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G + P+ ND GR N+R+E+ +
Sbjct: 414 FREIL---GLGDEMPVANNDIDDGRIKNRRVEVWV 445
>gi|129134|sp|P24016|OMPA_CITFR RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|144442|gb|AAA23095.1| outer membrane protein II [Citrobacter freundii]
Length = 238
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 120 SDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 179
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YLI + + IS RG P+ N D R ++R+EI++
Sbjct: 180 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEV 235
>gi|332342400|gb|AEE55734.1| outer membrane protein OmpA [Escherichia coli UMNK88]
Length = 350
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 223 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 283 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 338
>gi|332279861|ref|ZP_08392274.1| outer membrane protein A [Shigella sp. D9]
gi|332102213|gb|EGJ05559.1| outer membrane protein A [Shigella sp. D9]
Length = 374
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 247 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 306
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 307 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 362
>gi|332093647|gb|EGI98705.1| outer membrane protein A [Shigella boydii 3594-74]
Length = 346
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 219 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 278
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 279 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 334
>gi|331651979|ref|ZP_08352998.1| outer membrane protein A (Outer membrane protein II) [Escherichia
coli M718]
gi|331050257|gb|EGI22315.1| outer membrane protein A (Outer membrane protein II) [Escherichia
coli M718]
Length = 375
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 248 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 307
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 308 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 363
>gi|331641486|ref|ZP_08342621.1| outer membrane protein A [Escherichia coli H736]
gi|331038284|gb|EGI10504.1| outer membrane protein A [Escherichia coli H736]
Length = 370
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 243 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 302
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 303 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 358
>gi|323967204|gb|EGB62628.1| OmpA transmembrane domain-containing protein [Escherichia coli
M863]
gi|323976664|gb|EGB71752.1| OmpA transmembrane domain-containing protein [Escherichia coli
TW10509]
gi|327253749|gb|EGE65378.1| outer membrane protein A [Escherichia coli STEC_7v]
Length = 350
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 223 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 283 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 338
>gi|323462898|pdb|3NB3|A Chain A, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
gi|323462899|pdb|3NB3|B Chain B, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
gi|323462900|pdb|3NB3|C Chain C, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
Length = 346
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 219 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 278
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 279 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 334
>gi|320192555|gb|EFW67196.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
EC1212]
gi|320202354|gb|EFW76925.1| Outer membrane protein A precursor [Escherichia coli EC4100B]
gi|323165436|gb|EFZ51223.1| outer membrane protein A [Shigella sonnei 53G]
Length = 337
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 210 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 269
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 270 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 325
>gi|315619153|gb|EFU99733.1| outer membrane protein A [Escherichia coli 3431]
Length = 346
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 219 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 278
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 279 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 334
>gi|309701236|emb|CBJ00536.1| outer membrane protein A [Escherichia coli ETEC H10407]
Length = 346
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 219 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 278
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 279 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 334
>gi|307637795|gb|ADN80245.1| peptidoglycan associated lipoprotein precursor [Helicobacter pylori
908]
gi|325996393|gb|ADZ51798.1| peptidoglycan associated lipoprotein precursor [Helicobacter pylori
2018]
gi|325997981|gb|ADZ50189.1| putative peptidoglycan associated lipoprotein [Helicobacter pylori
2017]
Length = 152
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 52/153 (33%), Gaps = 5/153 (3%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQ-MQLQDTGIVVSRIGDMIT--CYIPVHVSFVSEVFLEK 90
D+ K ++ E + + + V I I + +++
Sbjct: 1 MAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPVVEEKPAIESGTIIASIYFDFDKYEIKE 60
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L I + + ++ +TD G+ + N + +R +K+ L+ +
Sbjct: 61 SDQETLDEIVQKAKEN-HMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVIK-GVEKD 118
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
I F P T+ + N+R+++++
Sbjct: 119 MIKTISFGETKPKCVQKTRECYRENRRVDVKLV 151
>gi|300819200|ref|ZP_07099401.1| outer membrane protein A [Escherichia coli MS 107-1]
gi|300528219|gb|EFK49281.1| outer membrane protein A [Escherichia coli MS 107-1]
Length = 353
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 226 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 285
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 286 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 341
>gi|300824154|ref|ZP_07104273.1| outer membrane protein A [Escherichia coli MS 119-7]
gi|300925361|ref|ZP_07141248.1| outer membrane protein A [Escherichia coli MS 182-1]
gi|301327213|ref|ZP_07220475.1| outer membrane protein A [Escherichia coli MS 78-1]
gi|309795053|ref|ZP_07689473.1| outer membrane protein A [Escherichia coli MS 145-7]
gi|300418528|gb|EFK01839.1| outer membrane protein A [Escherichia coli MS 182-1]
gi|300523330|gb|EFK44399.1| outer membrane protein A [Escherichia coli MS 119-7]
gi|300846194|gb|EFK73954.1| outer membrane protein A [Escherichia coli MS 78-1]
gi|308121357|gb|EFO58619.1| outer membrane protein A [Escherichia coli MS 145-7]
Length = 358
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 231 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 346
>gi|300921002|ref|ZP_07137390.1| outer membrane protein A [Escherichia coli MS 115-1]
gi|300412048|gb|EFJ95358.1| outer membrane protein A [Escherichia coli MS 115-1]
Length = 358
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 231 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 346
>gi|300902879|ref|ZP_07120825.1| outer membrane protein A [Escherichia coli MS 84-1]
gi|301302427|ref|ZP_07208558.1| outer membrane protein A [Escherichia coli MS 124-1]
gi|300405092|gb|EFJ88630.1| outer membrane protein A [Escherichia coli MS 84-1]
gi|300842266|gb|EFK70026.1| outer membrane protein A [Escherichia coli MS 124-1]
gi|315258005|gb|EFU37973.1| outer membrane protein A [Escherichia coli MS 85-1]
Length = 358
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 231 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 346
>gi|293414237|ref|ZP_06656886.1| OOP family OmpA-OmpF porin [Escherichia coli B185]
gi|291434295|gb|EFF07268.1| OOP family OmpA-OmpF porin [Escherichia coli B185]
Length = 350
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 223 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 283 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 338
>gi|281600319|gb|ADA73303.1| Outer membrane protein A [Shigella flexneri 2002017]
Length = 356
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 229 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 288
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 289 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 344
>gi|256018784|ref|ZP_05432649.1| outer membrane protein A [Shigella sp. D9]
Length = 369
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 242 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 302 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 357
>gi|238055498|sp|B7LNW7|OMPA_ESCF3 RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
Length = 351
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 224 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 283
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 284 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 339
>gi|237730913|ref|ZP_04561394.1| outer membrane protein A [Citrobacter sp. 30_2]
gi|226906452|gb|EEH92370.1| outer membrane protein A [Citrobacter sp. 30_2]
Length = 356
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 229 SDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 288
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YLI + + IS RG P+ N D R ++R+EI++
Sbjct: 289 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEV 344
>gi|218553544|ref|YP_002386457.1| outer membrane protein A [Escherichia coli IAI1]
gi|331676747|ref|ZP_08377443.1| outer membrane protein A [Escherichia coli H591]
gi|218360312|emb|CAQ97862.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI1]
gi|331075436|gb|EGI46734.1| outer membrane protein A [Escherichia coli H591]
Length = 374
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 247 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 306
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 307 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 362
>gi|218548466|ref|YP_002382257.1| outer membrane protein A [Escherichia fergusonii ATCC 35469]
gi|218356007|emb|CAQ88623.1| outer membrane protein A (3a;II*;G;d) [Escherichia fergusonii ATCC
35469]
Length = 375
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 248 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 307
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 308 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 363
>gi|189010293|ref|ZP_02805910.2| outer membrane protein A [Escherichia coli O157:H7 str. EC4076]
gi|208815928|ref|ZP_03257107.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045]
gi|208822372|ref|ZP_03262691.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042]
gi|209397392|ref|YP_002269625.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115]
gi|217325746|ref|ZP_03441830.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588]
gi|291281957|ref|YP_003498775.1| OmpA domain protein transmembrane region-containing protein
precursor [Escherichia coli O55:H7 str. CB9615]
gi|293433254|ref|ZP_06661682.1| OOP family OmpA-OmpF porin [Escherichia coli B088]
gi|300929657|ref|ZP_07145117.1| outer membrane protein A [Escherichia coli MS 187-1]
gi|300949672|ref|ZP_07163655.1| outer membrane protein A [Escherichia coli MS 116-1]
gi|300955388|ref|ZP_07167765.1| outer membrane protein A [Escherichia coli MS 175-1]
gi|301022508|ref|ZP_07186383.1| outer membrane protein A [Escherichia coli MS 196-1]
gi|301643481|ref|ZP_07243528.1| outer membrane protein A [Escherichia coli MS 146-1]
gi|189001311|gb|EDU70297.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4076]
gi|208732576|gb|EDZ81264.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045]
gi|208737857|gb|EDZ85540.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042]
gi|209158792|gb|ACI36225.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115]
gi|217321967|gb|EEC30391.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588]
gi|290761830|gb|ADD55791.1| OmpA domain protein transmembrane region-containing protein
precursor [Escherichia coli O55:H7 str. CB9615]
gi|291324073|gb|EFE63495.1| OOP family OmpA-OmpF porin [Escherichia coli B088]
gi|299881205|gb|EFI89416.1| outer membrane protein A [Escherichia coli MS 196-1]
gi|300317723|gb|EFJ67507.1| outer membrane protein A [Escherichia coli MS 175-1]
gi|300450941|gb|EFK14561.1| outer membrane protein A [Escherichia coli MS 116-1]
gi|300462395|gb|EFK25888.1| outer membrane protein A [Escherichia coli MS 187-1]
gi|301078120|gb|EFK92926.1| outer membrane protein A [Escherichia coli MS 146-1]
gi|320187167|gb|EFW61868.1| Outer membrane protein A precursor [Shigella flexneri CDC 796-83]
gi|324019104|gb|EGB88323.1| outer membrane protein A [Escherichia coli MS 117-3]
gi|326338147|gb|EGD61976.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
1125]
Length = 354
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 227 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 286
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 287 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 342
>gi|170020642|ref|YP_001725596.1| outer membrane protein A [Escherichia coli ATCC 8739]
gi|256023341|ref|ZP_05437206.1| outer membrane protein A [Escherichia sp. 4_1_40B]
gi|307137587|ref|ZP_07496943.1| outer membrane protein A [Escherichia coli H736]
gi|169755570|gb|ACA78269.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli ATCC 8739]
gi|320637825|gb|EFX07617.1| outer membrane protein A [Escherichia coli O157:H7 str. G5101]
gi|320642950|gb|EFX12151.1| outer membrane protein A [Escherichia coli O157:H- str. 493-89]
gi|320653723|gb|EFX21797.1| outer membrane protein A [Escherichia coli O55:H7 str. 3256-97 TW
07815]
Length = 365
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 238 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 297
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 298 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 353
>gi|158536391|gb|ABW72720.1| outer membrane protein A [Escherichia coli]
gi|158536395|gb|ABW72722.1| outer membrane protein A [Escherichia coli]
gi|158536397|gb|ABW72723.1| outer membrane protein A [Escherichia coli]
Length = 358
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 231 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 346
>gi|158536385|gb|ABW72717.1| outer membrane protein A [Escherichia coli]
gi|158536387|gb|ABW72718.1| outer membrane protein A [Escherichia coli]
gi|158536389|gb|ABW72719.1| outer membrane protein A [Escherichia coli]
gi|158536393|gb|ABW72721.1| outer membrane protein A [Escherichia coli]
gi|158536399|gb|ABW72724.1| outer membrane protein A [Escherichia coli]
gi|158536401|gb|ABW72725.1| outer membrane protein A [Escherichia coli]
Length = 358
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 231 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 346
>gi|110804972|ref|YP_688492.1| outer membrane protein A [Shigella flexneri 5 str. 8401]
gi|110614520|gb|ABF03187.1| outer membrane protein 3a [Shigella flexneri 5 str. 8401]
Length = 348
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 221 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 280
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 281 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKRRAALIDCLAPDRRVEIEV 336
>gi|38000008|gb|AAP74760.2| outer membrane protein A precursor [Shigella flexneri 2a]
Length = 327
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 200 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 259
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 260 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 315
>gi|82776247|ref|YP_402596.1| outer membrane protein A [Shigella dysenteriae Sd197]
gi|81240395|gb|ABB61105.1| outer membrane protein 3a [Shigella dysenteriae Sd197]
Length = 350
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 223 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 283 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 338
>gi|51235578|gb|AAT98590.1| outer membrane protein A [Escherichia coli]
Length = 346
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 219 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 278
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 279 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 334
>gi|30062494|ref|NP_836665.1| outer membrane protein A [Shigella flexneri 2a str. 2457T]
gi|56479781|ref|NP_706879.2| outer membrane protein A [Shigella flexneri 2a str. 301]
gi|82544719|ref|YP_408666.1| outer membrane protein A [Shigella boydii Sb227]
gi|30040740|gb|AAP16471.1| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str.
2457T]
gi|56383332|gb|AAN42586.2| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str. 301]
gi|81246130|gb|ABB66838.1| outer membrane protein 3a [Shigella boydii Sb227]
gi|313650796|gb|EFS15197.1| outer membrane protein A [Shigella flexneri 2a str. 2457T]
gi|332759051|gb|EGJ89361.1| outer membrane protein A [Shigella flexneri 4343-70]
gi|332759932|gb|EGJ90233.1| outer membrane protein A [Shigella flexneri 2747-71]
gi|332762738|gb|EGJ93001.1| outer membrane protein A [Shigella flexneri K-671]
gi|332767750|gb|EGJ97941.1| outer membrane protein 3a [Shigella flexneri 2930-71]
gi|333001202|gb|EGK20770.1| outer membrane protein A [Shigella flexneri VA-6]
gi|333006193|gb|EGK25702.1| outer membrane protein A [Shigella flexneri K-218]
gi|333008941|gb|EGK28401.1| outer membrane protein A [Shigella flexneri K-272]
gi|333020097|gb|EGK39368.1| outer membrane protein A [Shigella flexneri K-304]
gi|333020253|gb|EGK39523.1| outer membrane protein A [Shigella flexneri K-227]
Length = 348
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 221 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 280
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 281 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 336
>gi|309786688|ref|ZP_07681308.1| outer membrane protein A [Shigella dysenteriae 1617]
gi|129143|sp|P02935|OMPA_SHIDY RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
gi|46945|emb|CAA24638.1| unnamed protein product [Shigella dysenteriae]
gi|308925381|gb|EFP70868.1| outer membrane protein A [Shigella dysenteriae 1617]
Length = 351
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 224 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 283
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 284 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 339
>gi|157159269|ref|YP_001462189.1| outer membrane protein A [Escherichia coli E24377A]
gi|331667340|ref|ZP_08368205.1| outer membrane protein A [Escherichia coli TA271]
gi|51235576|gb|AAT98589.1| outer membrane protein A [Escherichia coli]
gi|157081299|gb|ABV21007.1| outer membrane protein A [Escherichia coli E24377A]
gi|331065696|gb|EGI37589.1| outer membrane protein A [Escherichia coli TA271]
Length = 350
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 223 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 283 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 338
>gi|15800816|ref|NP_286832.1| outer membrane protein A [Escherichia coli O157:H7 EDL933]
gi|15830295|ref|NP_309068.1| outer membrane protein A [Escherichia coli O157:H7 str. Sakai]
gi|16128924|ref|NP_415477.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. MG1655]
gi|74311514|ref|YP_309933.1| outer membrane protein A [Shigella sonnei Ss046]
gi|89107807|ref|AP_001587.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. W3110]
gi|157160478|ref|YP_001457796.1| outer membrane protein A [Escherichia coli HS]
gi|170080615|ref|YP_001729935.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. DH10B]
gi|187730326|ref|YP_001880845.1| outer membrane protein A [Shigella boydii CDC 3083-94]
gi|188493530|ref|ZP_03000800.1| outer membrane protein P5 [Escherichia coli 53638]
gi|209918209|ref|YP_002292293.1| outer membrane protein A [Escherichia coli SE11]
gi|218694432|ref|YP_002402099.1| outer membrane protein A [Escherichia coli 55989]
gi|238900215|ref|YP_002926011.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952]
gi|253774014|ref|YP_003036845.1| outer membrane protein A [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254161071|ref|YP_003044179.1| outer membrane protein A [Escherichia coli B str. REL606]
gi|254792157|ref|YP_003076994.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14359]
gi|260843206|ref|YP_003220984.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009]
gi|260854249|ref|YP_003228140.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368]
gi|260867129|ref|YP_003233531.1| outer membrane protein A [Escherichia coli O111:H- str. 11128]
gi|261227460|ref|ZP_05941741.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK2000]
gi|261256117|ref|ZP_05948650.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK966]
gi|307311656|ref|ZP_07591296.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli W]
gi|312971089|ref|ZP_07785268.1| outer membrane protein A [Escherichia coli 1827-70]
gi|71159604|sp|P0A911|OMPA_ECO57 RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II*; Flags: Precursor
gi|71159605|sp|P0A910|OMPA_ECOLI RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II*; Flags: Precursor
gi|12514142|gb|AAG55443.1|AE005286_2 outer membrane protein 3a (II*;G;d) [Escherichia coli O157:H7 str.
EDL933]
gi|42161|emb|CAA23588.1| ompA protein [Escherichia coli]
gi|1651465|dbj|BAA35715.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K12
substr. W3110]
gi|1787191|gb|AAC74043.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. MG1655]
gi|13360501|dbj|BAB34464.1| outer membrane protein 3a [Escherichia coli O157:H7 str. Sakai]
gi|32329155|gb|AAP74759.1| outer membrane protein A precursor [Shigella sonnei]
gi|73854991|gb|AAZ87698.1| outer membrane protein 3a (II*;G;d) [Shigella sonnei Ss046]
gi|157066158|gb|ABV05413.1| outer membrane protein A [Escherichia coli HS]
gi|169888450|gb|ACB02157.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. DH10B]
gi|187427318|gb|ACD06592.1| outer membrane protein A [Shigella boydii CDC 3083-94]
gi|188488729|gb|EDU63832.1| outer membrane protein P5 [Escherichia coli 53638]
gi|209774438|gb|ACI85531.1| outer membrane protein 3a [Escherichia coli]
gi|209774440|gb|ACI85532.1| outer membrane protein 3a [Escherichia coli]
gi|209774442|gb|ACI85533.1| outer membrane protein 3a [Escherichia coli]
gi|209774444|gb|ACI85534.1| outer membrane protein 3a [Escherichia coli]
gi|209774446|gb|ACI85535.1| outer membrane protein 3a [Escherichia coli]
gi|209911468|dbj|BAG76542.1| outer membrane protein OmpA [Escherichia coli SE11]
gi|218351164|emb|CAU96868.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli 55989]
gi|238861958|gb|ACR63956.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952]
gi|242376772|emb|CAQ31485.1| outer membrane protein 3a (II*;G;d) [Escherichia coli BL21(DE3)]
gi|253325058|gb|ACT29660.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972972|gb|ACT38643.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli B str.
REL606]
gi|253977186|gb|ACT42856.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BL21(DE3)]
gi|254591557|gb|ACT70918.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli O157:H7
str. TW14359]
gi|257752898|dbj|BAI24400.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368]
gi|257758353|dbj|BAI29850.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009]
gi|257763485|dbj|BAI34980.1| outer membrane protein A [Escherichia coli O111:H- str. 11128]
gi|260449897|gb|ACX40319.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli DH1]
gi|306908211|gb|EFN38710.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli W]
gi|310336850|gb|EFQ02017.1| outer membrane protein A [Escherichia coli 1827-70]
gi|315060242|gb|ADT74569.1| outer membrane protein A [Escherichia coli W]
gi|315135605|dbj|BAJ42764.1| OmpA domain protein transmembrane region-containing protein
precursor [Escherichia coli DH1]
gi|320648407|gb|EFX17062.1| outer membrane protein A [Escherichia coli O157:H- str. H 2687]
gi|320659566|gb|EFX27129.1| outer membrane protein A [Escherichia coli O55:H7 str. USDA 5905]
gi|320664337|gb|EFX31488.1| outer membrane protein A [Escherichia coli O157:H7 str. LSU-61]
gi|323157149|gb|EFZ43272.1| outer membrane protein A [Escherichia coli EPECa14]
gi|323159587|gb|EFZ45567.1| outer membrane protein A [Escherichia coli E128010]
gi|323174936|gb|EFZ60551.1| outer membrane protein A [Escherichia coli LT-68]
gi|323175416|gb|EFZ61011.1| outer membrane protein A [Escherichia coli 1180]
gi|323185333|gb|EFZ70697.1| outer membrane protein A [Escherichia coli 1357]
gi|323379198|gb|ADX51466.1| OmpA/MotB domain protein [Escherichia coli KO11]
gi|323938062|gb|EGB34324.1| OmpA transmembrane domain-containing protein [Escherichia coli
E1520]
gi|323942872|gb|EGB39037.1| OmpA transmembrane domain-containing protein [Escherichia coli
E482]
gi|323947254|gb|EGB43262.1| OmpA transmembrane domain-containing protein [Escherichia coli
H120]
gi|323962843|gb|EGB58418.1| OmpA transmembrane domain-containing protein [Escherichia coli
H489]
gi|323973167|gb|EGB68359.1| OmpA transmembrane domain-containing protein [Escherichia coli
TA007]
gi|324117179|gb|EGC11087.1| OmpA transmembrane domain-containing protein [Escherichia coli
E1167]
Length = 346
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 219 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 278
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 279 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 334
>gi|332286925|ref|YP_004418836.1| peptidoglycan-associated lipoprotein [Pusillimonas sp. T7-7]
gi|330430878|gb|AEC22212.1| peptidoglycan-associated lipoprotein [Pusillimonas sp. T7-7]
Length = 165
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ ++++ A+ L I I+ + D+ G + NL + Q R++
Sbjct: 59 RSVYFDFDSYTVPDQYRSLVEMHASYLASHAQQNILIEGNADARGGSEYNLALGQRRSEA 118
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + I F + P T +T+ N+R +I
Sbjct: 119 VARMMTLL-GVNAGQIEAISFGKERPKATGNTEADYAENRRADIV 162
>gi|163851783|ref|YP_001639826.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens
PA1]
gi|218530589|ref|YP_002421405.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
gi|240138946|ref|YP_002963421.1| flagellar motor protein MotB [Methylobacterium extorquens AM1]
gi|163663388|gb|ABY30755.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1]
gi|218522892|gb|ACK83477.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
gi|240008918|gb|ACS40144.1| flagellar motor protein MotB [Methylobacterium extorquens AM1]
Length = 337
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 57/160 (35%), Gaps = 14/160 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + + V +GD + L+ + P L
Sbjct: 181 AQRVQELARYRSDFFGRLRQVI-GSRTDVRIVGDRFVLQ-SEVLFAAGSAALKPEAGPEL 238
Query: 97 QLIATIL----NKFPS---TVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRG 145
IA + + P+ V+ + HTD+ +N +S RA + YL +G
Sbjct: 239 DRIAGAILDIAREIPADIPWVLRVDGHTDARPIQSAQFPSNWALSASRAIAVVQYLRSKG 298
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ R + F P+D+ ++ N+RIE+++ R
Sbjct: 299 LPPQRLL-AGAFGEFQPLDSGTSEEAYSRNRRIEMKLTER 337
>gi|24216275|ref|NP_713756.1| flagellar motor protein MotB [Leptospira interrogans serovar Lai
str. 56601]
gi|24197541|gb|AAN50774.1| flagellar motor protein MotB [Leptospira interrogans serovar Lai
str. 56601]
Length = 275
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 59/186 (31%), Gaps = 16/186 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-PV 78
R ++ +S + K S A + F+ +++ + ++ + +
Sbjct: 66 SKGRLEEMGMNIESLPSQTTGKALSKSKQLATELFKPEVEAGKVKITEDERGLIISLVSA 125
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI------------GTLKNN 126
L L+ A+ L K + + ++ H D+ NN
Sbjct: 126 DYFNPGSAILTDSIKIALRK-ASSLIKNLNRFVRVEGHCDANAVNPGVAPGKEERAYINN 184
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQNNQRIEIQIFP 184
++ RA Y+I + F P+ T + N+RI+I I
Sbjct: 185 WDLAGARAINSTDYIINVEKLDPSWFQAVSFGAFRPLVVEYAGTPEAKAYNRRIDIVIMT 244
Query: 185 RGNIKK 190
+ K+
Sbjct: 245 EKSTKR 250
>gi|317012627|gb|ADU83235.1| flagellar motor protein MotB [Helicobacter pylori Lithuania75]
Length = 257
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 72/209 (34%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD K++ ++ RA + LI + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLI-QYGVNPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|313639080|gb|EFS04061.1| chemotaxis protein MotB [Listeria seeligeri FSL S4-171]
Length = 275
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 53/151 (35%), Gaps = 7/151 (4%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
++ + + + Q + T ++ + + I + F L + + I
Sbjct: 115 EKIEAFKKQIDSYIQAEKLGTKMMTKYSDEGLLITIRDDILFQSGSAELSAGKREIAKEI 174
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE------RADVIKSYLIQRGVSSNRFIS 153
+ + T+ I S + + S + +++ + + + S
Sbjct: 175 GDLFAQGKGTMEGIVSGHTDNVPISTSTYSSNWELSVARAVNFMEAIIQENNEVNPGEFS 234
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RG+ P+ ND R+ N+R+EI + P
Sbjct: 235 ARGYGEFKPVAKNDIATNREKNRRVEIMVRP 265
>gi|308184601|ref|YP_003928734.1| flagellar motor protein MotB [Helicobacter pylori SJM180]
gi|308060521|gb|ADO02417.1| flagellar motor protein MotB [Helicobacter pylori SJM180]
Length = 257
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 72/209 (34%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD+ K++ ++ RA + LI +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDNTPLIKTRFKSHYELAANRAYRVMKVLI-QYGVDPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|296282485|ref|ZP_06860483.1| hypothetical protein CbatJ_02635 [Citromicrobium bathyomarinum
JL354]
Length = 305
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 1/146 (0%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ E + V+ I + E L + L
Sbjct: 150 TAAMIQRGTEQGFAEQTAATEALRGRVADIDNYNVKGTTNVYFDTGEYKLSGQAQAELCS 209
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN-RFISVRGF 157
A ++ + ++ + +TDS G+ + N +S++RA+ + +YL Q+ R ++ G
Sbjct: 210 AAAQADQMDNALLLVVGYTDSTGSYEINQELSEKRAERVVNYLQQQCGWKPYRMLTPTGM 269
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIF 183
A P+ N T G+Q N+R+ + I
Sbjct: 270 AQADPVADNSTDYGKQQNRRVAVNIL 295
>gi|37704672|gb|AAR01608.1| OprF [Pseudomonas sp. MFY245]
Length = 314
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + +++ ++ +A + ++PST ++ H
Sbjct: 207 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKENSYGDIKNLADFMKQYPSTTTTVEGH 266
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L + + + G+ P+
Sbjct: 267 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 314
>gi|317011033|gb|ADU84780.1| flagellar motor protein MotB [Helicobacter pylori SouthAfrica7]
Length = 257
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 63/208 (30%), Gaps = 33/208 (15%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVLVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P + F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSSLLFENATSDTINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIGTLKNNL---LISQERADVIKSYLIQRGVSSNRFI 152
+ IA I+ K P V I ++ TD K ++ + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDTPLAKTRFKSHYELAANRAYRVMKVLMQYGVDPNQL 202
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
S + PI ND+ R N R+EI
Sbjct: 203 SFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|144900280|emb|CAM77144.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Magnetospirillum gryphiswaldense MSR-1]
Length = 319
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++ + + ++ K +T + + H D G K N+ +S +RA+ +K
Sbjct: 216 VFFDFNKSDITPEASKVITQAVDTAKKGKTTRVDLTGHADRSGPDKYNMALSLKRANAVK 275
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++++ ISV G P+ V N+R+EI +
Sbjct: 276 AAMVKQ-GIPADQISVVGKGEAVPLVQTPDGVREPQNRRVEIVL 318
>gi|259417968|ref|ZP_05741887.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259346874|gb|EEW58688.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 207
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 61/178 (34%), Gaps = 19/178 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K ++F + I+G + A + L
Sbjct: 1 MLKH--AAIFGLALITG--------------ACAYQEAGAPLGSQYFGAANENNTAVLSG 44
Query: 61 TGIVVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
++ +P + L+ +L A + +FP + HTD+
Sbjct: 45 DRSYRIQLATRFANEVPTTINFDFDSARLDGNARQVLDAQADWIRQFPEVRFRVYGHTDA 104
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+G+ N + RA +YL+ RG++ NR +V F P+ D + R N+R
Sbjct: 105 VGSQSYNKRLGLRRARAAVNYLVARGIARNRLEAVASFGETQPLVLTDQRERR--NRR 160
>gi|163800953|ref|ZP_02194853.1| hypothetical protein 1103602000593_AND4_01783 [Vibrio sp. AND4]
gi|159175302|gb|EDP60099.1| hypothetical protein AND4_01783 [Vibrio sp. AND4]
Length = 252
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + K++ L A IL P + + H D+ GT + N ++Q RA+ +
Sbjct: 132 DNQFAIDSAEINPKYMGHLAEAAYILRDHPYLSLVVTGHADATGTPEYNSQLAQNRAEQV 191
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
K + ++ + + P+ T R N+R+ I++
Sbjct: 192 KR-YLTVFGITSDRVQTKSVGESLPLYEGQTPGVRLTNRRVSIEVLS 237
>gi|239995434|ref|ZP_04715958.1| sodium-type flagellar protein MotY [Alteromonas macleodii ATCC
27126]
Length = 118
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L K L +I L + + + +TDS G NN +S RA+ +KS
Sbjct: 14 YQNNSTELTKYSQKRLTMIGEYLKEDGELELVLLDGYTDSYGGRYNNEQLSIRRANEVKS 73
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YL GV +R I + G K I NDT+ R N+R+ +++
Sbjct: 74 YLTTLGVPEDR-IQLTGHGEKRHIAPNDTRESRAQNRRVVVRL 115
>gi|302186190|ref|ZP_07262863.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
Length = 447
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 58/157 (36%), Gaps = 8/157 (5%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ + + ++ + + Q+ ++R + ++
Sbjct: 296 AQSAEGQEIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERLSVNFR---FAQGSAR 352
Query: 88 LEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ K L+ +A L + + D+ + L+S+ RA ++ L+ +
Sbjct: 353 LDNKAQQDLKRVADYLKSSDKLDRHVTLVGFGDAKSDPERAALLSRLRAMAVRRELL-KS 411
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ R I G + P+ TND GR N+R+E+ +
Sbjct: 412 GVTFRDI--VGLGDEMPVATNDIDDGRIKNRRVEVWV 446
>gi|256839169|ref|ZP_05544679.1| outer membrane protein OmpA family protein [Parabacteroides sp.
D13]
gi|256740088|gb|EEU53412.1| outer membrane protein OmpA family protein [Parabacteroides sp.
D13]
Length = 658
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 45/137 (32%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + L + +LN P+ I + +HTD GT + N ++Q R
Sbjct: 516 VVIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDRKGTDQYNERLAQRR 575
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND---------------TKV-------- 170
A + YLI + +G+ P N T+
Sbjct: 576 AQSVVDYLIAG-GIEAARLEAKGYGESVPKMINKKMAKQFDFLKEGDVLTEEFILALPPE 634
Query: 171 ----GRQNNQRIEIQIF 183
Q N+R E ++
Sbjct: 635 QQEIADQINRRTEFKVL 651
>gi|225620699|ref|YP_002721957.1| outer membrane protein [Brachyspira hyodysenteriae WA1]
gi|225215519|gb|ACN84253.1| outer membrane protein [Brachyspira hyodysenteriae WA1]
Length = 203
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 65/194 (33%), Gaps = 11/194 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L M ++ + C A T+ N+ + +
Sbjct: 1 MKKIFLLMSVVIIAAACKSAPVATGPEDTSGFKTTEANNQNAKGLNLPDGATVRETPRGK 60
Query: 62 GIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+V+ P + L+ I+N P I ++ ++
Sbjct: 61 VLVLHDPKSKTDVGKPGSTYEVKFGFDNTIEIGTYKEAYNLVYQIINNNPGVRIMVEGNS 120
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G N +SQ R+D +Y+I+ GV +++ + F P + N+R
Sbjct: 121 SKEGPAPYNYKLSQRRSDKSFNYIIKLGVENSKLLK-NAFGEALPEYPTLKE-----NRR 174
Query: 178 IE-IQIFPRGNIKK 190
E I I ++KK
Sbjct: 175 SEFIIIMTEDDLKK 188
>gi|219870352|ref|YP_002474727.1| 18K peptidoglycan-associated outer membrane lipoprotein PalA
[Haemophilus parasuis SH0165]
gi|219690556|gb|ACL31779.1| 18K peptidoglycan-associated outer membrane lipoprotein, precursor
PalA [Haemophilus parasuis SH0165]
Length = 153
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 55/179 (30%), Gaps = 33/179 (18%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K ++ + ++ C ++ + T
Sbjct: 1 MKKLAKVLMIAAPAFVLAACSSSNDNASANASANAGQTF--------------------- 39
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G+ V + L+ + +L A L + + H D
Sbjct: 40 --GGMSVQD----LQTRYNTVYFDFDSYTLKAEDQQLLDAHAQYLVASKG-KVTVAGHAD 92
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RAD +K +L +G S+ ++ + + P ++ N+R
Sbjct: 93 ERGTPEYNIALGQRRADAVKDFLATKGASN---VATVSYGEEKPAVLGHSEADYSKNRR 148
>gi|129138|sp|P24754|OMPA_ESCHE RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|146987|gb|AAA24234.1| outer membrane protein II [Escherichia hermannii]
gi|146995|gb|AAA24238.1| outer membrane protein II [Escherichia hermannii]
Length = 243
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + TD IG+ N +S++RA
Sbjct: 125 SDVLFNFNKATLKPEGQQALDQMYTQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 184
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 185 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 240
>gi|331672486|ref|ZP_08373276.1| outer membrane protein A [Escherichia coli TA280]
gi|331070392|gb|EGI41757.1| outer membrane protein A [Escherichia coli TA280]
Length = 370
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 243 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 302
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 303 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 358
>gi|330960958|gb|EGH61218.1| OmpA family protein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 447
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 55/157 (35%), Gaps = 8/157 (5%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ ++ + + Q+ ++R + ++
Sbjct: 296 AQSPEGQAIVAQEGFVAQTVQALKVQPTAQMPADYQALTRKAERLSVNFR---FAQGSAR 352
Query: 88 LEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ K L+ + L + + D+ L+S+ RA ++ L++ G
Sbjct: 353 LDNKAQQDLKRVVDYLKANDRLDQHVTLVGFGDAKSDPARAALLSRLRAMAVRRELLKSG 412
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V+ + G + P+ TND GR N+R+E+ +
Sbjct: 413 VTFRDIL---GLGDEMPVATNDIDDGRIKNRRVEVWV 446
>gi|331662369|ref|ZP_08363292.1| outer membrane protein A [Escherichia coli TA143]
gi|331682461|ref|ZP_08383080.1| outer membrane protein A [Escherichia coli H299]
gi|331060791|gb|EGI32755.1| outer membrane protein A [Escherichia coli TA143]
gi|331080092|gb|EGI51271.1| outer membrane protein A [Escherichia coli H299]
Length = 346
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 219 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 278
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 279 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 334
>gi|300937693|ref|ZP_07152496.1| outer membrane protein A [Escherichia coli MS 21-1]
gi|301023085|ref|ZP_07186892.1| outer membrane protein A [Escherichia coli MS 69-1]
gi|300397206|gb|EFJ80744.1| outer membrane protein A [Escherichia coli MS 69-1]
gi|300457294|gb|EFK20787.1| outer membrane protein A [Escherichia coli MS 21-1]
Length = 358
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 231 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 346
>gi|300896337|ref|ZP_07114879.1| outer membrane protein A [Escherichia coli MS 198-1]
gi|300359748|gb|EFJ75618.1| outer membrane protein A [Escherichia coli MS 198-1]
Length = 354
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 227 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 286
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 287 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 342
>gi|293409335|ref|ZP_06652911.1| outer membrane protein A [Escherichia coli B354]
gi|291469803|gb|EFF12287.1| outer membrane protein A [Escherichia coli B354]
Length = 350
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 223 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 283 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 338
>gi|284920801|emb|CBG33864.1| outer membrane protein A [Escherichia coli 042]
Length = 350
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 223 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 283 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 338
>gi|158536383|gb|ABW72716.1| outer membrane protein A [Escherichia coli]
Length = 354
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 227 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 286
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 287 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 342
>gi|218704380|ref|YP_002411899.1| outer membrane protein A [Escherichia coli UMN026]
gi|293404256|ref|ZP_06648250.1| outer membrane protein A [Escherichia coli FVEC1412]
gi|298380040|ref|ZP_06989645.1| outer membrane protein A [Escherichia coli FVEC1302]
gi|51235574|gb|AAT98588.1| outer membrane protein A [Escherichia coli]
gi|218431477|emb|CAR12355.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli UMN026]
gi|291428842|gb|EFF01867.1| outer membrane protein A [Escherichia coli FVEC1412]
gi|298279738|gb|EFI21246.1| outer membrane protein A [Escherichia coli FVEC1302]
Length = 346
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 219 SDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 278
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 279 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 334
>gi|326346124|gb|EGD69862.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
1044]
Length = 273
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 146 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 205
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 206 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 261
>gi|309244379|gb|ADO52194.1| OprL [Pseudomonas cichorii]
gi|309244381|gb|ADO52195.1| OprL [Pseudomonas cichorii]
Length = 156
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 21/157 (13%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + N N E + I
Sbjct: 21 GCSSKGGDNAGAGAVDPNAGYGANTGAVDGSLSEEAALRA-------------------I 61
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + L L + A L + ++ +TD GT + N+ + + RA
Sbjct: 62 TTFYFEYDSSDLKPEALRALDVHAKDLKAN-GARVVLEGNTDERGTREYNMALGERRAKA 120
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
++ YL+ + S + + + + P+ T +
Sbjct: 121 VQRYLVLQ-GVSPAQLELVSYGEERPVATGNDXQSWA 156
>gi|148260706|ref|YP_001234833.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|326403901|ref|YP_004283983.1| hypothetical protein ACMV_17540 [Acidiphilium multivorum AIU301]
gi|146402387|gb|ABQ30914.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
gi|325050763|dbj|BAJ81101.1| hypothetical protein ACMV_17540 [Acidiphilium multivorum AIU301]
Length = 342
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 56/155 (36%), Gaps = 14/155 (9%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ + + L D + +GD + L K + +A
Sbjct: 189 QSLEQYRSEFFGVLRKALADQK-DIKVVGDRFVFE-SAVLFPSDSARLSAKGKAEIAKVA 246
Query: 101 TILNKFP-------STVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ + V+++ + D + G K+N +S RA + LI GV N
Sbjct: 247 QAIEAIAPKIPDKINWVLSVTGYADKEAITGGPYKDNFDLSAARALSVLHLLIADGVPKN 306
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
R ++ GF +PI T +T N+RIE ++
Sbjct: 307 RVVAA-GFGADHPIATGNTPQDLAQNRRIEFRLTS 340
>gi|86130772|ref|ZP_01049371.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85818183|gb|EAQ39343.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 293
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 6/133 (4%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
I + ++ I + F + K+ +L+ IA ++N P+ + ++ HT
Sbjct: 149 ASQDINIDIDDTVVQISISDKMLFRSGSYRVSKEADDLLKRIAAVVNSEPAVEVMVEGHT 208
Query: 118 DSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
DS LK+N +S +RA I L + G + P+ N++K
Sbjct: 209 DSRTVKKGSYLKDNWDLSVQRATAIVRELQNNHNVDPAKLIASGRSSYVPLVENNSKENM 268
Query: 173 QNNQRIEIQIFPR 185
N+R I I P
Sbjct: 269 SRNRRTRILILPN 281
>gi|293603403|ref|ZP_06685830.1| peptidoglycan-associated lipoprotein [Achromobacter piechaudii ATCC
43553]
gi|292818176|gb|EFF77230.1| peptidoglycan-associated lipoprotein [Achromobacter piechaudii ATCC
43553]
Length = 166
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 1/113 (0%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
I + ++ +++ A L + I+ +TD G + NL
Sbjct: 51 NPQSILAQQRSVYFDFDSYTVSDQYRGLVETHARYLASHQQQKVKIEGNTDERGGAEYNL 110
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ Q RAD ++ + S+ I F + P T ++ N+R +I
Sbjct: 111 ALGQRRADAVRRMMTLL-GVSDNQIETISFGKEKPKSTGTSEADFAENRRADI 162
>gi|218674466|ref|ZP_03524135.1| probable outer membrane lipoprotein [Rhizobium etli GR56]
Length = 178
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ + + + + + ++ ++ + D I L+
Sbjct: 24 STTEIASLEEPTAAPMTGQTNDPAPGFEN--VAAGSEEDFILNVGRRIYFKQDSATLDSV 81
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ L A LN+ P+ ++ +Q D G+ +SQ+RAD +YL +GV R
Sbjct: 82 AMATLDNQAAWLNRNPTWLLKLQGFADDSGSASQMETLSQKRADAAMAYLASKGVDPKRM 141
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+G+ + + + N+R+
Sbjct: 142 W-AKGYGNDREVRDCTDRSCKVQNRRV 167
>gi|257095753|ref|YP_003169394.1| peptidoglycan-associated lipoprotein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048277|gb|ACV37465.1| peptidoglycan-associated lipoprotein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 176
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 46/161 (28%), Gaps = 9/161 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
C K + E G+
Sbjct: 16 ACSSTPDSSDKAGGAPVETRGGSGGVTTVTTGGVESR--------GLPAVLTDPTSILSK 67
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ ++ ++ A L + IQ +TD G+ + NL + Q+RAD
Sbjct: 68 RSVYFDFDSYEVKSEYKDLVTAHAKFLTDNRQFKMLIQGNTDERGSREYNLALGQKRADA 127
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
++ L G ++ SV + P + + N+R
Sbjct: 128 VRKMLTLLGAREDQLESVS-LGEEKPKNEGHDESAWAQNRR 167
>gi|167855462|ref|ZP_02478226.1| lipoprotein Plp4 [Haemophilus parasuis 29755]
gi|167853391|gb|EDS24641.1| lipoprotein Plp4 [Haemophilus parasuis 29755]
Length = 281
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G+ + + + L K ++ +A L + + + + D +G+ + NL
Sbjct: 131 NGNSSFNLVGDFLFDFDKDILTTKGREVVDNVAEQLKSSGAEKVKLVGYADRLGSEEYNL 190
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN------NQRIEIQ 181
+SQ RA+++K+ L+++G+ I G+ + D + G+ N+R+EI
Sbjct: 191 DLSQRRANMVKARLVEQGIKVP--IEAVGYGKANQVKACDGESGQALRDCLRPNRRVEIT 248
>gi|331007308|ref|ZP_08330507.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC1989]
gi|330418870|gb|EGG93337.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC1989]
Length = 434
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 9/145 (6%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
LDK E + + + + G + + L + L L+A L +F
Sbjct: 271 LDKTNAELSSE-KSRLVQQFKDGTTLIRLEDTILFSSGSASLNARGQKTLSLVADTLAEF 329
Query: 107 PSTVIAIQSHTDSIGT-------LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
P+ +I+I+ HTD N +S RA +L+++ + GFA
Sbjct: 330 PNHLISIEGHTDHRPIVSTLAEKYPTNWELSAARASFAIRHLMEK-GLPAKQFQAVGFAN 388
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIFP 184
PI + ++ N+RIEI + P
Sbjct: 389 TRPIAMDVDYASQKKNRRIEILLHP 413
>gi|254450200|ref|ZP_05063637.1| OmpA domain protein [Octadecabacter antarcticus 238]
gi|198264606|gb|EDY88876.1| OmpA domain protein [Octadecabacter antarcticus 238]
Length = 656
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 3/119 (2%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLIS 130
S L+ + + +A ++ + + HTDS G N +S
Sbjct: 537 ILEGGQIGFLSSSARLDATSIRTINALAAVVLPCAAADLTLEVGGHTDSSGDELTNNALS 596
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
Q+RA+ +++ LI R ++ GF PI N T GR N+R +I F G ++
Sbjct: 597 QDRANAVRAALIVR-GVPENAMTAFGFGPTQPITDNATPEGRAANRRTDITWFAAGALR 654
>gi|148554094|ref|YP_001261676.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
gi|148499284|gb|ABQ67538.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
Length = 295
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 1/146 (0%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ D+ +E + + I + L + L
Sbjct: 142 TATMIRNATDQRFEEQTAATESLRGALGDIDKYNIKSTTNVHFDTGKTELSAEDKAHLCS 201
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN-RFISVRGF 157
A+ + ++ + +TDS G+ N +S++RA+ + +YL Q R ++ G
Sbjct: 202 TASTAEATENALMLVVGYTDSTGSDDFNQELSEKRANRVINYLQQACGWKPYRMLTPTGM 261
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIF 183
A P TNDT G+ N+R+ + I
Sbjct: 262 AKADPAATNDTPEGKAQNRRVAVNIL 287
>gi|153207149|ref|ZP_01945928.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
'MSU Goat Q177']
gi|161831560|ref|YP_001596059.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
RSA 331]
gi|165918434|ref|ZP_02218520.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
RSA 334]
gi|120576810|gb|EAX33434.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
'MSU Goat Q177']
gi|161763427|gb|ABX79069.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
RSA 331]
gi|165917940|gb|EDR36544.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
RSA 334]
Length = 182
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 66/183 (36%), Gaps = 10/183 (5%)
Query: 1 MIKELGLSMFIMTTI--SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
++K GL++ + T+ SGC + + +Q QL
Sbjct: 4 LVKNSGLAVIALATLNLSGCKHHP------AGANAATGLSDGTGAQAYALAEGKGYQGQL 57
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ I ++ + L L +++ A L + + ++ +TD
Sbjct: 58 KKDS-EGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYLATHSTAKVRLEGNTD 116
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ G+ + N+ + R + ++++ + + I + + + P + + + N+R+
Sbjct: 117 NRGSREYNIGLGWRRDQAVAR-ILEQEGVAPKQIDMVSYGKERPAVMGNNENAWRLNRRV 175
Query: 179 EIQ 181
+
Sbjct: 176 NLI 178
>gi|324113719|gb|EGC07694.1| OmpA transmembrane domain-containing protein [Escherichia
fergusonii B253]
gi|325496887|gb|EGC94746.1| outer membrane protein A [Escherichia fergusonii ECD227]
Length = 359
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 232 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 291
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 292 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 347
>gi|317177353|dbj|BAJ55142.1| flagellar motor protein MotB [Helicobacter pylori F16]
Length = 255
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 72/209 (34%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVLVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDSINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD K++ ++ RA + ++ + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDTPLIKTRFKSHYELAANRAYRVMK-VLMQYGVNPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|289640922|ref|ZP_06473092.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata]
gi|289509237|gb|EFD30166.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata]
Length = 394
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
L + L IA +L + + + H D+ G N +S
Sbjct: 284 VVATGRITFATDSSELTEADRVHLDRIAAVLRE-SELSVLLAGHADARGPGVLNETLSLA 342
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
RA +YL + S + GFA ++P+ TN T+ GR N+R+EI
Sbjct: 343 RARAAAAYLADQ-GVSADHLRAAGFASEHPVATNATEAGRAANRRVEI 389
>gi|71907729|ref|YP_285316.1| hypothetical protein Daro_2103 [Dechloromonas aromatica RCB]
gi|71847350|gb|AAZ46846.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 214
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 58/154 (37%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ E L + ++ I+ + ++ L+ + +L+ ++
Sbjct: 55 QQEEQRRMALEKALAGPLASGRVTLTNGKIGIS---GNVLFALNSDQLQPEGKQLLKSLS 111
Query: 101 TILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ + ++ + TD + +N +S +RA + LI GV ++
Sbjct: 112 QPIAAYLGASEQMLMVSGFTDDMPVRGSNRQFADNWELSAQRALTVTRTLIDDGVPASSI 171
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+ N GR N+R+E+ P+
Sbjct: 172 FAAA-FGAQQPVADNAAAEGRARNRRVEMAPVPK 204
>gi|325269973|ref|ZP_08136582.1| OmpA family protein [Prevotella multiformis DSM 16608]
gi|324987696|gb|EGC19670.1| OmpA family protein [Prevotella multiformis DSM 16608]
Length = 697
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 50/142 (35%), Gaps = 28/142 (19%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
G + I + L + L + +L++ P+ I + +HTD IG+ + N
Sbjct: 521 GLHVPVLIDNIFYDFDKATLRPESEKALNELVKLLDENPNVTIELSAHTDYIGSAEYNKR 580
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP-------------------------- 162
+SQ RAD + + + + ++ G+ + P
Sbjct: 581 LSQRRADAVVA-YLTAHGIARDRLTPVGYGKERPKKIRKKLTEKYPWLKENDVLTEDFIR 639
Query: 163 -IDTNDTKVGRQNNQRIEIQIF 183
+D + Q N+R E +
Sbjct: 640 KLDKEKQETANQLNRRTEFTVL 661
>gi|224536108|ref|ZP_03676647.1| hypothetical protein BACCELL_00973 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522279|gb|EEF91384.1| hypothetical protein BACCELL_00973 [Bacteroides cellulosilyticus
DSM 14838]
Length = 667
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + L + +LN P+ I + +H D G NL +SQ R
Sbjct: 527 VLIENIFYEFDKADLTSESTVALDELIELLNDNPNVTIELSAHCDYKGNDDYNLRLSQRR 586
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND---------------TKV-------- 170
A+ + YLI +G ++ +G+ + P T+
Sbjct: 587 AESVVRYLI-KGGIDPERLTPKGYGEQQPKTVTKFTLKSAPFLKEGDVLTEEFIKNLPPE 645
Query: 171 ----GRQNNQRIEIQIF 183
N+R E ++
Sbjct: 646 QQEICNAINRRTEFKVL 662
>gi|89889840|ref|ZP_01201351.1| OmpA family protein [Flavobacteria bacterium BBFL7]
gi|89518113|gb|EAS20769.1| OmpA family protein [Flavobacteria bacterium BBFL7]
Length = 625
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + L + + + K+P + +++ D G+ NL ++Q R
Sbjct: 511 IILNKIYFDLDASNIRPDAALELDRLVSFMKKYPELEVMAETYADIRGSDSYNLALTQRR 570
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND----TKVGRQNNQRIEIQIFPR 185
A+ I +Y++ +GV ++R ++ G P+ T + ++R E I R
Sbjct: 571 AESIVAYVVSQGVDASR-LTAVGRGEANPVMDCASQKCTSAEYELSRRSEFTITKR 625
>gi|293390339|ref|ZP_06634673.1| lipoprotein PlpD [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290950873|gb|EFE00992.1| lipoprotein PlpD [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 274
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L K ++ +A L + + + + +TD +G+ N+ +SQ RAD +
Sbjct: 142 DFLFDFDKDTLTVKGREVVDKVAAQLKESKAQEVKVAGYTDRLGSKVYNMDLSQRRADRV 201
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK------VGRQNNQRIEIQ---IFPRGNI 188
K+ LI++G+ I+ G+ + + + + N+R+EI I P+
Sbjct: 202 KNRLIEQGIDVQ--INTVGYGEAHQVQACNNVKSSQLISCLRPNRRVEISSSGITPKDES 259
Query: 189 KK 190
K+
Sbjct: 260 KQ 261
>gi|219870536|ref|YP_002474911.1| lipoprotein Plp4/outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Haemophilus
parasuis SH0165]
gi|219690740|gb|ACL31963.1| lipoprotein Plp4/outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Haemophilus
parasuis SH0165]
Length = 281
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G+ + + + L K ++ +A L + + + + D +G+ + NL
Sbjct: 131 NGNSSFNLVGDFLFDFDKDILTTKGREVVDDVAEQLKSSGAEKVKLVGYADRLGSEEYNL 190
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN------NQRIEIQ 181
+SQ RA+++K+ L+++G+ I G+ + D + G+ N+R+EI
Sbjct: 191 DLSQRRANMVKARLVEQGIKVP--IEAVGYGKANQVKACDGESGQALRDCLRPNRRVEIT 248
>gi|161503852|ref|YP_001570964.1| outer membrane protein A [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160865199|gb|ABX21822.1| hypothetical protein SARI_01940 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 358
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + LN + + TD IG+ N +S++RA
Sbjct: 231 SDVLFTFNKDNLKPEGKQALDQLYNQLNNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ +YLI + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVNYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 346
>gi|209546851|ref|YP_002278769.1| OmpA/MotB domain-containing protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538095|gb|ACI58029.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 184
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 16/162 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + + G + D I
Sbjct: 28 GCSTTEVASLEEPTAAPMTGQTNDPAPGFE---------------NVAAGSEEDFILNVG 72
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + L A LN+ P+ ++ +Q D G+ +SQ+RAD
Sbjct: 73 RRIYFKQDSAALDSVAMATLDNQANWLNRNPTWLLKLQGFADDSGSASKMETLSQKRADA 132
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+YL +GV + R +G+ + + + N+R+
Sbjct: 133 AMAYLASKGVDTKRMW-AKGYGNDREVRDCTERSCKVQNRRV 173
>gi|37704600|gb|AAR01572.1| OprF [Pseudomonas sp. MFY30]
gi|37704670|gb|AAR01607.1| OprF [Pseudomonas sp. MFY234]
Length = 314
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 207 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMTQYPSTTTTVEGH 266
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L + + + G+ P+
Sbjct: 267 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 314
>gi|37704650|gb|AAR01597.1| OprF [Pseudomonas sp. MFY138]
Length = 314
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 207 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMTQYPSTTTTVEGH 266
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L + + + G+ P+
Sbjct: 267 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 314
>gi|83594657|ref|YP_428409.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
gi|9408182|emb|CAB99313.1| porin-assoziated protein (PAP) [Rhodospirillum rubrum]
gi|83577571|gb|ABC24122.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
Length = 273
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 60/176 (34%), Gaps = 9/176 (5%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++T + +S + T + D+ + + Q+ I ++ +G
Sbjct: 100 ALVTALGAGAPSS----NPTVAAKAQTSFDCWAEEAEEDRQPEHIRECKQNFEIAMNALG 155
Query: 70 DM----ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + L + L ++ + + + D+ G
Sbjct: 156 GAPAPAVVSEGFKVFFALDSARLSPESEATLDRVSQAFLSGSPASVMVVGYADTSGPADY 215
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N+L+SQ RA+ + + + ++ +++ + + V Q N+R+E+
Sbjct: 216 NILLSQRRAEAVAR-GLAQRGIASEVLTLEAYGEERLAVPTADGVVEQQNRRVEVV 270
>gi|119896572|ref|YP_931785.1| hypothetical protein azo0281 [Azoarcus sp. BH72]
gi|119668985|emb|CAL92898.1| conserved hypothetical outer membrane protein [Azoarcus sp. BH72]
Length = 214
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 55/153 (35%), Gaps = 13/153 (8%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+ E + L + + + + ++ L+ +L+ +A
Sbjct: 56 VEEQRREALEKALAVPLASGRVTL---ANGRIGISGSVLFALNSDELQPDGRQLLKSLAP 112
Query: 102 ILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L + ++ + TD +N +S +RA + L++ GV S
Sbjct: 113 PLAAYLASHDEMLMVSGFTDDRPVRDSNRQFADNWELSAQRALTVTRVLVEEGVPSAAVF 172
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+ +N GR N+R+E+ PR
Sbjct: 173 AAA-FGQEQPVASNADADGRARNRRVEMAPVPR 204
>gi|114776885|ref|ZP_01451928.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
gi|114552971|gb|EAU55402.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
Length = 200
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 58/199 (29%), Gaps = 30/199 (15%)
Query: 14 TISGCGL------ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM---QLQDTGIV 64
+S C S + N++ G+ + E + + D
Sbjct: 1 MLSSCSTINAIFGPSEPESTAAPAGDQQLASENEQLGAEVAALRAELKQVNQDIADKKAQ 60
Query: 65 VSRIGDMITCYIPVHV------SFVSEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHT 117
+ PV + L ++ L +A P I ++ +T
Sbjct: 61 ATASPKPERVATPVDRLWVTVSFRSGYMELTRESRKALSRLAKKFLSKPREQSIEVRGYT 120
Query: 118 DSIG-------------TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
D K N+ +S RA + LI N + GF +
Sbjct: 121 DDEPIGGYPGHRHKPHHPYKTNMALSHARATNVAQALIDAC-IPNDSVRALGFGASNYVA 179
Query: 165 TNDTKVGRQNNQRIEIQIF 183
N T GRQ N+R EI +
Sbjct: 180 DNATAEGRQRNRRAEIHLV 198
>gi|329755842|gb|AEC04318.1| outer membrane protein A [Pasteurella multocida]
gi|329755852|gb|AEC04323.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 10/130 (7%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + + L+ +L I + + S +A+ +TD
Sbjct: 224 GQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDR 283
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR----- 172
+G+ NL +SQ RAD + +YL+ + + IS G P+ N D+ GR
Sbjct: 284 LGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISATGHGEANPVTGNKCDSVKGRKALIA 342
Query: 173 --QNNQRIEI 180
+++R+EI
Sbjct: 343 CLADDRRVEI 352
>gi|325107821|ref|YP_004268889.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305]
gi|324968089|gb|ADY58867.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305]
Length = 280
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 10/158 (6%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQL 98
+ + + +L + F L P+L+
Sbjct: 114 ARTQQNPMSNEATRKFQELARKYPDFEFDPYTGVSKFHADILFSSGSAELRDTAKPLLRD 173
Query: 99 IATILNK--FPSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNR 150
+A I+N + + HTD N +S RA+ + ++ S
Sbjct: 174 LAAIMNDGDARGLNLLVVGHTDDQPIASARGTHPTNWHLSTNRANSVV-LALKNSGISEH 232
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ G++ P+ N RQ N+R+EI + +
Sbjct: 233 RMGAAGYSLNQPLVPNTNDHSRQRNRRVEIFVLAPDAV 270
>gi|37704608|gb|AAR01576.1| OprF [Pseudomonas sp. MFY52]
gi|37704630|gb|AAR01587.1| OprF [Pseudomonas sp. MFY76]
Length = 316
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 209 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKTNSYGDIKNLADFMKQYPSTTTTVEGH 268
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L + + + G+ P+
Sbjct: 269 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 316
>gi|330953391|gb|EGH53651.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 447
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 57/157 (36%), Gaps = 8/157 (5%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ + ++ + + Q+ ++R + ++
Sbjct: 296 AQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERLSVNFR---FAQGSAR 352
Query: 88 LEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ K L+ +A L + + D+ + L+S+ RA ++ L+ +
Sbjct: 353 LDNKAQQDLKRVADYLKSSDKLDRHVTLVGFGDAKSDPERAALLSRLRAMAVRRELL-KS 411
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ R I G + P+ TND GR N+R+E+ +
Sbjct: 412 GVTFRDI--VGLGDEMPVATNDIDDGRIKNRRVEVWV 446
>gi|289625126|ref|ZP_06458080.1| OmpA family protein [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289648705|ref|ZP_06480048.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 2250]
gi|330867997|gb|EGH02706.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 447
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 5/152 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
S + + + G + + L+ K
Sbjct: 298 SAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFRFAQGSAKLDNKA 357
Query: 93 LPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L+ +A L + + + D+ L+S+ RA ++ L++ GV+
Sbjct: 358 QQDLKRVAEYLKTSNQLNQHVTLVGFGDAKSDPARAALLSRLRAMAVRRELLKSGVTFRD 417
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G + P+ TND GR N+R+E+ +
Sbjct: 418 ---IVGLGDEMPVATNDIDDGRIKNRRVEVWV 446
>gi|170697803|ref|ZP_02888889.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria IOP40-10]
gi|170137305|gb|EDT05547.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria IOP40-10]
Length = 404
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 60/181 (33%), Gaps = 12/181 (6%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
+ + + G A+ ++ + E + ++ + + R
Sbjct: 229 LAVALLLGAGGYAAADRWVRTKETRRALPLDALARN-----LEQRLRDEVAAGNVELIRA 283
Query: 69 GDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTL--- 123
+ + + + ++ + S + + + DS
Sbjct: 284 PGSDALTLRFGGLFAPGDAAVAPWGASVVASAGREIAVLTGSATVHVAGYADSTSARSTR 343
Query: 124 -KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S+ RA + L+ GVS+ R ISV G + N T GR N+R+E+ I
Sbjct: 344 QASNQALSEARARHVAQILVSAGVSAPR-ISVEGNGEADSLADNGTAAGRARNRRVEVTI 402
Query: 183 F 183
Sbjct: 403 T 403
>gi|95930151|ref|ZP_01312890.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
gi|95133845|gb|EAT15505.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
Length = 629
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L+ + L L + +++ + + D+IG N ++S++R +
Sbjct: 526 FKSGSTELDNRALRDLDRLVDFMHQGRNRYRPLMLFGFADNIGENDVNQVLSEKRTRKVS 585
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L RG+++ V G P+ N T GR+ N+R+E+ I
Sbjct: 586 TALQSRGLNAK---VVMGLGEAMPVADNATSAGREKNRRVEVWI 626
>gi|259417580|ref|ZP_05741499.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259346486|gb|EEW58300.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 166
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ V + + + +L A L P+ V+ I+ H D GT + NL + RA+
Sbjct: 56 DRVLFLVDQSSISPEAQGILDGQARWLTANPAYVVTIEGHADERGTREYNLALGARRANS 115
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ YLI +GV+++R +V + + PI+ + N+R + + G +
Sbjct: 116 AREYLISQGVAASRIQTVS-YGKERPIEICSEQSCYNKNRRA-VTVLAGGAV 165
>gi|261837954|gb|ACX97720.1| flagellar motor rotation protein [Helicobacter pylori 51]
Length = 255
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 65/208 (31%), Gaps = 33/208 (15%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIGTLKNNL---LISQERADVIKSYLIQRGVSSNRFI 152
+ IA I+ K P V I ++ TD K ++ + + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDTPLAKTRFKSHYELAANRAYRVMKVLMQYGVNPNQL 202
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
S + PI ND+ R N R+EI
Sbjct: 203 SFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|327402922|ref|YP_004343760.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327318430|gb|AEA42922.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 321
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 13/153 (8%)
Query: 44 GSSLDKAEDEFQMQLQD---TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLI 99
++ + + L+ G+ V I + + F +E + L +
Sbjct: 164 DDAMKQLKTRVSAALKGFENKGLTVVEKNGKIYVSLEAKLLFASGSTTVEAEGKKALVDL 223
Query: 100 ATILNKFPSTVIAIQSHTD-----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
A +L I ++ HTD S K+N +S R+ + +I + +
Sbjct: 224 AKVLENEKDLEIIVEGHTDTDKLASTAHPKSNWELSVLRSTAVVEIMIGNSKMNPMQLMA 283
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
G +P+ + N+RIE+ I P N
Sbjct: 284 AGRGEYHPV----DAKDKAKNRRIEVIISPNLN 312
>gi|260768773|ref|ZP_05877707.1| putative sodium-type flagellar protein MotY precursor [Vibrio
furnissii CIP 102972]
gi|260616803|gb|EEX41988.1| putative sodium-type flagellar protein MotY precursor [Vibrio
furnissii CIP 102972]
Length = 254
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L + L+ I+ ++ P + I H+DS G NL +S+ RAD + +Y +
Sbjct: 156 ALTQNQRSQLEAISELVLFDPKIKTVRITGHSDSHGDTVVNLSVSRRRADDV-AYWMMMA 214
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ +RG +YP+ N T+ GR N+R+EI++ R
Sbjct: 215 GVPTEMMEIRGQGGRYPVANNATEEGRLANRRVEIELVRR 254
>gi|254522020|ref|ZP_05134075.1| OmpA/MotB domain protein [Stenotrophomonas sp. SKA14]
gi|219719611|gb|EED38136.1| OmpA/MotB domain protein [Stenotrophomonas sp. SKA14]
Length = 513
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + L + +L P+ ++I+ HTD G + +N +S++RA + +
Sbjct: 412 FATDKAQILPASELQLAQVLQLLQGDPALKLSIEGHTDDSGAVAHNRSLSEDRARSVVA- 470
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + GF P+ N ++ G+ N+R+E+
Sbjct: 471 ALTAKGIAADRLQAAGFGADKPVADNGSEEGKARNRRVELV 511
>gi|220924409|ref|YP_002499711.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219949016|gb|ACL59408.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
Length = 337
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 13/140 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-------T 109
Q+ + +GD + + L + P L IAT + +
Sbjct: 200 QILGNRSDIRIVGDRFVLQ-SEVLFAAGQASLRAEAGPELDRIATAIRELNRQIPSDIPW 258
Query: 110 VIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
V+ + HTD+ + N +S RA + YL+ R + + F PIDT
Sbjct: 259 VLRVDGHTDARPISSSAFPSNWALSAARAIAVVQYLVGR-GIPPQHLLAGAFGEFQPIDT 317
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
+ N+RIE+++ R
Sbjct: 318 GTSDEAYARNRRIELKLTER 337
>gi|329755858|gb|AEC04326.1| outer membrane protein A [Pasteurella multocida]
Length = 348
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 20/155 (12%)
Query: 45 SSLDKAEDEFQMQLQ----------DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
D +F+ + + V + + L+
Sbjct: 189 EYADGQYADFRPDIGSVTAGLSYRFGQSVYVPEVVSKTFTLNTDVTFGFDKADLKPAAQN 248
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+L I + + S +A+ +TD +G+ NL +SQ RAD + +YL+ + + IS
Sbjct: 249 VLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISA 307
Query: 155 RGFAYKYPIDTN--DTKVGR-------QNNQRIEI 180
G P+ N D+ GR +++R+EI
Sbjct: 308 TGHGEANPVTGNKCDSVKGRKALIACLADDRRVEI 342
>gi|209364239|ref|YP_001425325.2| peptidoglycan-associated lipoprotein [Coxiella burnetii Dugway
5J108-111]
gi|207082172|gb|ABS76935.2| peptidoglycan-associated lipoprotein [Coxiella burnetii Dugway
5J108-111]
Length = 195
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 66/183 (36%), Gaps = 10/183 (5%)
Query: 1 MIKELGLSMFIMTTI--SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
++K GL++ + T+ SGC + + +Q QL
Sbjct: 17 LVKNSGLAVIALATLNLSGCKHHP------AGANAATGLSDGTGAQAYALAEGKGYQGQL 70
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ I ++ + L L +++ A L + + ++ +TD
Sbjct: 71 KKDS-EGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYLATHSTAKVRLEGNTD 129
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ G+ + N+ + R + ++++ + + I + + + P + + + N+R+
Sbjct: 130 NRGSREYNIGLGWRRDQAVAR-ILEQEGVAPKQIDMVSYGKERPAVMGNNENAWRLNRRV 188
Query: 179 EIQ 181
+
Sbjct: 189 NLI 191
>gi|86359103|ref|YP_470995.1| hypothetical protein RHE_CH03512 [Rhizobium etli CFN 42]
gi|86283205|gb|ABC92268.1| probable outer membrane protein [Rhizobium etli CFN 42]
Length = 343
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN----KFP---ST 109
++ + +GD + L + +A L + P +
Sbjct: 205 EILSDRENIRIVGDRFVFQ-SEVLFPSGGADLNPDGQTEMAKLAAALLDLAKEIPPEINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S ERA + +LI +GV ++R ++ GF PI
Sbjct: 264 VLRVDGHTDNVPLAGTGRYRDNWELSSERAISVVKFLIGQGVPADRLVAA-GFGEFQPIA 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
DT R N+RIE+++ +
Sbjct: 323 PGDTPDARATNRRIELKLTEK 343
>gi|89053189|ref|YP_508640.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88862738|gb|ABD53615.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 195
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 11/183 (6%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--- 60
LG++ + + ++++ + + G A+ + ++
Sbjct: 16 SLGMTALGVGAFVVTATPAAAQQQIIITGQVQPGLWVDPDGCLHWVADGGIEGYMEGRVN 75
Query: 61 --TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G+ V + + L LQ + AI HTD
Sbjct: 76 PENGMPVCLDVNPCGVANTDTMFQSGSARLTGSGRQYLQQ---FFAGAGAYAYAIYGHTD 132
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S + + N+ +S+ RA + + G R I G+ + P+ ND+ Q N+R+
Sbjct: 133 SRASDEYNMRLSERRAAAVANVARSVGARVAREI---GYGERRPVAPNDSAANMQRNRRV 189
Query: 179 EIQ 181
EI
Sbjct: 190 EIV 192
>gi|269976278|ref|ZP_06183274.1| flagellar motor protein MotD [Mobiluncus mulieris 28-1]
gi|269935607|gb|EEZ92145.1| flagellar motor protein MotD [Mobiluncus mulieris 28-1]
Length = 325
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/189 (10%), Positives = 50/189 (26%), Gaps = 14/189 (7%)
Query: 12 MTTISGCGLA-------SREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQDTGI 63
+ +SG A + + + + + E Q +
Sbjct: 73 LGLLSGSTSAVNLGSMMGNDTTTAAGQPERIQAMAEASHLNQIKQQVEQALAAAGQTGAL 132
Query: 64 VVSRIGDMITCYI--PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + + ++ +L +A +L P +AI+ + D
Sbjct: 133 QMRITEKGLVLGMVASDTYFKPGDAEVQPTAQAVLAALAPVLAGTPE-DVAIEGYADPNP 191
Query: 122 TLKNNLLISQERADVIKSYLI---QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ A ++ + G + + + + N+R+
Sbjct: 192 QYSAKYPSNYHLAAGRAIEVLIHLRNGGVPGSKLRTISYGADHQTQVEAGQDAWSLNRRV 251
Query: 179 EIQIFPRGN 187
+I I R
Sbjct: 252 DIVIMSRAK 260
>gi|260432019|ref|ZP_05785990.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415847|gb|EEX09106.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 518
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + +Q +A L ++ + +D G ++N I+ RA ++
Sbjct: 411 FEPGSSRPDAQSRSNIQQLAQALEAGQYDGRKLVFVGFSDGDGPAESNARIALRRAQTVR 470
Query: 139 SYL---IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + +Q V + ISV GF P+ +DT GR+ N+R+EI +
Sbjct: 471 NAVLAAVQTSVPDSVGISVEGFGEAMPLACDDTDWGRKANRRVEIWV 517
>gi|170719951|ref|YP_001747639.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169757954|gb|ACA71270.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 163
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 68 IGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ + V F S+V L + +++ I L + + H D+ G N
Sbjct: 46 TDEGWAFDLSGKVLFGSDVDSLNGQSQAIVERIGKALLGVGIQGVRVDGHADASGKAAYN 105
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S+ RA + LI + I RG P+ N T +GR N+R+ I +
Sbjct: 106 QQLSERRAHSVAKVLIG-IGMPTQNIQTRGLGSTQPVADNRTSLGRTENRRVSIVVAS 162
>gi|146983|gb|AAA24232.1| outer membrane protein II [Escherichia fergusonii]
Length = 243
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 125 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 184
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 185 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 240
>gi|152979448|ref|YP_001345077.1| peptidoglycan-associated lipoprotein [Actinobacillus succinogenes
130Z]
gi|150841171|gb|ABR75142.1| Peptidoglycan-associated lipoprotein [Actinobacillus succinogenes
130Z]
Length = 152
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 3/108 (2%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + +E ++ +L A L P+ + ++ + D GT + N+ +
Sbjct: 43 EDLQQRYNTVYFAFDRYDIEGEYQQLLDAHAAYLTATPAAKVLVEGNADERGTPEYNIAL 102
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
Q RAD +K+YL + IS + + P + N+R
Sbjct: 103 GQRRADAVKNYLSAK---GANNISTVSYGEEKPAVLGHDEAAYAKNRR 147
>gi|115358236|ref|YP_775374.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115283524|gb|ABI89040.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 404
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 60/181 (33%), Gaps = 12/181 (6%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
+ + + G A+ ++ + E + ++ + + R
Sbjct: 229 LAVALLLGAGGYAAADRWVRTKETRRALPLDALARN-----LEQRLRDEVAAGNVELIRA 283
Query: 69 GDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTL--- 123
+ + + + ++ + S + + + DS
Sbjct: 284 PGSDALTLRFGGLFAPGDAAVAPWGASVVASAGREIAVLTGSATVHVAGYADSTSARSTR 343
Query: 124 -KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S+ RA + L+ GVS+ R ISV G + N T GR N+R+E+ I
Sbjct: 344 QASNQALSEARARHVAQILVSAGVSAPR-ISVEGNGEADSLADNGTAAGRARNRRVEVTI 402
Query: 183 F 183
Sbjct: 403 T 403
>gi|166712215|ref|ZP_02243422.1| hypothetical protein Xoryp_12360 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 438
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 43/143 (30%), Gaps = 9/143 (6%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDM--ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + + V GD + L+ +L+ +A L + P
Sbjct: 297 LAPLLAAEQRAGLLTVHTDGDGRSTVRLASASMFPSGSAELDADQTHLLERVAAALEQVP 356
Query: 108 STVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + HTD S RA+ + + L R + G PI
Sbjct: 357 G-RVVVVGHTDDQPVRSLRFKDNFALSARRAESVGAVLAAGLRDR-RRVQTSGAGDSQPI 414
Query: 164 D-TNDTKVGRQNNQRIEIQIFPR 185
R N+R+EI + P
Sbjct: 415 ALPPQLPGNRARNRRVEILLIPE 437
>gi|114778405|ref|ZP_01453252.1| outer membrane protein A precursor [Mariprofundus ferrooxydans
PV-1]
gi|114551368|gb|EAU53925.1| outer membrane protein A precursor [Mariprofundus ferrooxydans
PV-1]
Length = 360
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L + L L + + +TD IGT + N +S+ RA+ +
Sbjct: 240 NSLFGFNRSTLRNEGKRALDKFVESLKGASFETMVVTGYTDRIGTDEYNQKLSERRANAV 299
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN---------QRIEIQIF 183
+ YL++ G I+ RG P+ + G+ N +R+E+++
Sbjct: 300 RDYLVKFGGIPADKITARGAGESNPVTKREDCAGKSGNPLITCLAPDRRVEVEVT 354
>gi|37704606|gb|AAR01575.1| OprF [Pseudomonas sp. MFY33]
Length = 316
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + +++ ++ +A + ++PST ++ H
Sbjct: 209 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKENSYGDIKNLADFMKQYPSTSTTVEGH 268
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L + + + G+ P+
Sbjct: 269 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESTRVQSVGYGESRPVA 316
>gi|269965970|ref|ZP_06180062.1| sodium-type flagellar protein MotY [Vibrio alginolyticus 40B]
gi|269829366|gb|EEZ83608.1| sodium-type flagellar protein MotY [Vibrio alginolyticus 40B]
Length = 293
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 87 FLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L K L IA + ++ + ++TDS + +S+ RA+ ++ Y G
Sbjct: 193 QLTKASKKRLSQIADYIRHNQDIDLVLVATYTDSTDGKSASQSLSERRAESLRDYFQSLG 252
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +R I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 253 LPEDR-IQVQGYGKRRPIADNGSPIGKDKNRRVVISL 288
>gi|193885262|pdb|2ZF8|A Chain A, Crystal Structure Of Moty
Length = 278
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 87 FLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L K L IA + ++ + ++TDS + +S+ RA+ ++ Y G
Sbjct: 172 QLTKASKKRLSQIADYIRHNQDIDLVLVATYTDSTDGKSASQSLSERRAESLRDYFQSLG 231
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +R I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 232 LPEDR-IQVQGYGKRRPIADNGSPIGKDKNRRVVISL 267
>gi|91781366|ref|YP_556573.1| putative flagellar motor protein (MotB) [Burkholderia xenovorans
LB400]
gi|91694026|gb|ABE37223.1| putative flagellar motor protein (MotB) [Burkholderia xenovorans
LB400]
Length = 230
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 6/134 (4%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ I +S+ + I + F + L + +LQ IA +L I
Sbjct: 96 LAPLRDNHRITISQTPQAVEIAINARILFNSGDARLLPESFAVLQQIAAVLRDRAKNNIL 155
Query: 113 IQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++ HTDS+ ++N +S RA + + R ++ G A +P+ +
Sbjct: 156 VEGHTDSLPISTAKYESNWELSSARAGAVVRFFADR-GIEGHRMAAIGRADNFPLIIGND 214
Query: 169 KVGRQNNQRIEIQI 182
V N+R+ I +
Sbjct: 215 AVANAANRRVTILV 228
>gi|262393713|ref|YP_003285567.1| sodium-type flagellar protein MotY [Vibrio sp. Ex25]
gi|1550618|dbj|BAA12313.1| component of sodium-driven polar flagellar motor [Vibrio
alginolyticus]
gi|262337307|gb|ACY51102.1| sodium-type flagellar protein MotY precursor [Vibrio sp. Ex25]
Length = 293
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 87 FLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L K L IA + ++ + ++TDS + +S+ RA+ ++ Y G
Sbjct: 193 QLTKASKKRLSQIADYIRHNQDIDLVLVATYTDSTDGKSASQSLSERRAESLRDYFQSLG 252
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +R I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 253 LPEDR-IQVQGYGKRRPIADNGSPIGKDKNRRVVISL 288
>gi|309244383|gb|ADO52196.1| OprL [Pseudomonas sp. AF23]
gi|309244387|gb|ADO52198.1| OprL [Pseudomonas sp. AF33]
gi|309244389|gb|ADO52199.1| OprL [Pseudomonas sp. AF70]
gi|309244391|gb|ADO52200.1| OprL [Pseudomonas sp. AF76]
gi|309244393|gb|ADO52201.1| OprL [Pseudomonas sp. BcB122]
gi|309244395|gb|ADO52202.1| OprL [Pseudomonas sp. BcB153]
Length = 156
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 21/157 (13%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + N N E + I
Sbjct: 21 GCSSKGGDNAGEGAVDPNAGYGANTGAVDGSLSEEAALRA-------------------I 61
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + + ++ +TD GT + N+ + + RA
Sbjct: 62 TTFYFEYDSSDLKPEAMRALDVHAKDLKANGN-RVTLEGNTDERGTREYNMALGERRAKA 120
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
++ YL+ + S + + + + P+ T +
Sbjct: 121 VQRYLVLQ-GVSPAQLELVSYGEERPVATGNDXQSWA 156
>gi|262275459|ref|ZP_06053269.1| lipoprotein precursor OmpA family [Grimontia hollisae CIP 101886]
gi|262220704|gb|EEY72019.1| lipoprotein precursor OmpA family [Grimontia hollisae CIP 101886]
Length = 223
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 5/135 (3%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E L V + + + + L +L I + ST
Sbjct: 86 LNKECAELLVRETPKVEQGSGGLVAKV---HFGFDKASLTPTGKKILAGIVDSI-TTSST 141
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ I HTDS+G+ NL + +RA+ +K YL+ G ++ + +V P+ TN+T
Sbjct: 142 PLTITGHTDSVGSHAYNLTLGLKRAESVKGYLVDAGKNNAQIKTVSA-GETKPVTTNETA 200
Query: 170 VGRQNNQRIEIQIFP 184
GR N+R+++ P
Sbjct: 201 KGRAENRRVDVVAVP 215
>gi|227876751|ref|ZP_03994860.1| flagellar motor protein B [Mobiluncus mulieris ATCC 35243]
gi|306817698|ref|ZP_07451440.1| OmpA/MotB domain protein [Mobiluncus mulieris ATCC 35239]
gi|227842648|gb|EEJ52848.1| flagellar motor protein B [Mobiluncus mulieris ATCC 35243]
gi|304649512|gb|EFM46795.1| OmpA/MotB domain protein [Mobiluncus mulieris ATCC 35239]
Length = 325
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/189 (10%), Positives = 50/189 (26%), Gaps = 14/189 (7%)
Query: 12 MTTISGCGLA-------SREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQDTGI 63
+ +SG A + + + + + E Q +
Sbjct: 73 LGLLSGSTSAVNLGSMMGNDTTTAAGQPERIQAMAEASHLNQIKQQVEQALAAAGQTGAL 132
Query: 64 VVSRIGDMITCYI--PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + + ++ +L +A +L P +AI+ + D
Sbjct: 133 QMRITEKGLVLGMVASDTYFKPGDAEVQPTAQAVLAALAPVLAGTPE-DVAIEGYADPNP 191
Query: 122 TLKNNLLISQERADVIKSYLI---QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ A ++ + G + + + + N+R+
Sbjct: 192 QYSAKYPSNYHLAAGRAIEVLIHLRNGGVPGSKLRTISYGADHQTQVEAGQDAWSLNRRV 251
Query: 179 EIQIFPRGN 187
+I I R
Sbjct: 252 DIVIMSRAK 260
>gi|119472858|ref|ZP_01614765.1| putative Component of sodium-driven polar flagellar motor
[Alteromonadales bacterium TW-7]
gi|119444690|gb|EAW25997.1| putative Component of sodium-driven polar flagellar motor
[Alteromonadales bacterium TW-7]
Length = 292
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V + L K L IA L + I+I S+TDS G NNL +S++
Sbjct: 181 ISFTVMNYQSNSSKLTKSSQQRLDKIAEYLKNDSTIESISIDSYTDSYGGRWNNLDLSRK 240
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA IK Y++ + GF K +DTND +GR N+R+ IQI
Sbjct: 241 RAKAIKDYMVSL-GVDENKVKTTGFGEKRFVDTNDNILGRDKNRRLVIQI 289
>gi|189466239|ref|ZP_03015024.1| hypothetical protein BACINT_02610 [Bacteroides intestinalis DSM
17393]
gi|189434503|gb|EDV03488.1| hypothetical protein BACINT_02610 [Bacteroides intestinalis DSM
17393]
Length = 224
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/223 (18%), Positives = 81/223 (36%), Gaps = 39/223 (17%)
Query: 2 IKELGLSMFI---MTTISGCGLASRE---------------------------KKKVFLH 31
+K++ +S+ + + C +
Sbjct: 1 MKKMKISVLLLSGAILLGSCSTMNNTAKGGVIGGGSGAAAGAIIGGLIGKGKGAAIGAAV 60
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSF-VSEVF 87
+ G +DK + +++ + + + + F +
Sbjct: 61 GAAVGTGAGVAIGHKMDK-KAAEAAKIEGAQVEKVTDTNGLAAVKVTFESGILFGFNSSA 119
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L L+ +A IL + P+T IAI HTD +GT + N+ +S++RA +++YL GVS
Sbjct: 120 LSNTSKASLRELAQILKEDPTTDIAIVGHTDKVGTYEANMKVSKDRAYTVENYLQDCGVS 179
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+F V G Y D + T N+R++I ++ + K
Sbjct: 180 PAQFKQVEGVGYNQ-YDDSMTA---SQNRRVDIYMYASEQMIK 218
>gi|49182348|gb|AAT57676.1| OmpA [Pasteurella multocida]
Length = 349
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 12/137 (8%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + + L+ +L I + + S +A+ +TD
Sbjct: 215 GQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDR 274
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR----- 172
+G+ NL +SQ RAD + +YL+ + + IS G P+ N D+ GR
Sbjct: 275 LGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISATGHGEANPVTGNKCDSVKGRKALIA 333
Query: 173 --QNNQRIEIQIFPRGN 187
+++R+EI + +GN
Sbjct: 334 CLADDRRVEIAV--KGN 348
>gi|305665970|ref|YP_003862257.1| OmpA domain-containing protein [Maribacter sp. HTCC2170]
gi|88710745|gb|EAR02977.1| OmpA domain protein [Maribacter sp. HTCC2170]
Length = 301
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 49/142 (34%), Gaps = 13/142 (9%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
D+ + +++ I + + L + I+
Sbjct: 172 ANRAEDADEQLADIYQRIKGNPISLEFNTAEASIN------------LRAEQRQKFANIS 219
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L+K V I HTD+ G N+ + QERAD + R I+
Sbjct: 220 RYLDKEDDAVANIVGHTDNTGQRDANIKLGQERADFA-KSYLMRNGIPESRINATSKGPD 278
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
PI +NDT+ GR N+R I +
Sbjct: 279 EPIASNDTEEGRAKNRRTVITL 300
>gi|327398736|ref|YP_004339605.1| OmpA/MotB domain-containing protein [Hippea maritima DSM 10411]
gi|327181365|gb|AEA33546.1| OmpA/MotB domain protein [Hippea maritima DSM 10411]
Length = 287
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 8/137 (5%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ E + ++ G I + + + LE +L ++A L +
Sbjct: 151 KKELLQYRNQIKMEITEEGLRIVIFDKNKRPMFYPGSDKLEPWAKEVLDIVAKQLADISN 210
Query: 109 TVIAIQSHTDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
I I+ HTD+ + +N +S RA+ + + GVS +RF S+ G+ P+
Sbjct: 211 -KITIEGHTDANPYVIGGLSNWDLSTMRANAARREIQTNGVSVSRFDSIVGYGDTRPVPG 269
Query: 166 NDTKVGRQNNQRIEIQI 182
D K N+RI I +
Sbjct: 270 TDPKD--PINRRIVILV 284
>gi|317182128|dbj|BAJ59912.1| flagellar motor protein MotB [Helicobacter pylori F57]
Length = 255
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 72/209 (34%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD K++ ++ RA + ++ + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDTPLIKTRFKSHYELAANRAYRVMK-VLMQYGVNPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|229485743|sp|P0C8Z2|OMPA_ESCFE RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|146991|gb|AAA24236.1| outer membrane protein II [Escherichia fergusonii]
gi|146999|gb|AAA24240.1| outer membrane protein II [Escherichia fergusonii]
Length = 243
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 125 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 184
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 185 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 240
>gi|261365210|ref|ZP_05978093.1| OmpA family protein [Neisseria mucosa ATCC 25996]
gi|288566472|gb|EFC88032.1| OmpA family protein [Neisseria mucosa ATCC 25996]
Length = 253
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 76/221 (34%), Gaps = 34/221 (15%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR------FGSSLDKAEDE 53
M K+L L ++F+ SG +AS K S+ + V + S DK
Sbjct: 1 MTKQLKLSALFVALVASGTAMASEPHTKHGYVVSSQSQEVVRNNYGECWRNSYFDKETQG 60
Query: 54 FQMQLQDTGIVVSRIG----DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ + D + + L + L +A L+
Sbjct: 61 RVECGDREAVAAVQQAPEYVDETVSLSSKTLFGFDKDNLRPEAQENLDALAQRLSNENVQ 120
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ ++ HTD +G+ + N +S+ RA+V+ +YL+ R + +S G T +
Sbjct: 121 TVRVEGHTDFMGSEEYNQALSERRANVVANYLVGR-GVPSSKVSAVGLGESQAQMTATCE 179
Query: 170 VGRQN--------------------NQRIEIQIFPRGNIKK 190
++R++++I R + K
Sbjct: 180 AEVAKLGKKVSKAKKRAALIACIEPDRRVDVKI--RSTVTK 218
>gi|192360398|ref|YP_001983048.1| putative sodium-type flagellar protein MotY [Cellvibrio japonicus
Ueda107]
gi|190686563|gb|ACE84241.1| putative sodium-type flagellar protein MotY [Cellvibrio japonicus
Ueda107]
Length = 392
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
L K L +A L + + +H+D + ++ S+ +A+++
Sbjct: 202 YQRDASQLSNKAKGELDKVARYSLADKNVLGVIVDAHSDKRDEAEQSMDASRTQAELVSQ 261
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YLI +G++ + I+ R KYP +N T+ GR N+R+ +++
Sbjct: 262 YLIAKGMNVAQ-ITSRWHGDKYPAASNATEQGRAQNRRVTVRL 303
>gi|49182354|gb|AAT57679.1| OmpA [Pasteurella multocida]
Length = 353
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 10/132 (7%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + + L+ +L I + + S +A+ +TD
Sbjct: 219 GQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDR 278
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR----- 172
+G+ NL +SQ RAD + +YL+ + + IS G P+ N D+ GR
Sbjct: 279 LGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISATGHGEANPVTGNKCDSVKGRKALIA 337
Query: 173 --QNNQRIEIQI 182
+++R+EI +
Sbjct: 338 CLADDRRVEIAV 349
>gi|292487869|ref|YP_003530744.1| outer membrane protein A [Erwinia amylovora CFBP1430]
gi|292899094|ref|YP_003538463.1| outer membrane protein A [Erwinia amylovora ATCC 49946]
gi|291198942|emb|CBJ46052.1| outer membrane protein A [Erwinia amylovora ATCC 49946]
gi|291553291|emb|CBA20336.1| Outer membrane protein A precursor [Erwinia amylovora CFBP1430]
gi|312171991|emb|CBX80248.1| Outer membrane protein A precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 355
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + +TD IG+ + N +S++RA
Sbjct: 228 SDVLFTFNKSTLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRIGSEQYNQKLSEKRA 287
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR-------QNNQRIEIQI 182
+ YL+ + + IS RG P+ N D+ GR ++R+EIQ+
Sbjct: 288 QSVVDYLVSK-GIPSNKISARGEGKSNPVTGNTCDSVKGRKALIDCLAPDRRVEIQV 343
>gi|259090543|gb|ACV91894.1| OprL [Pseudomonas fluorescens]
gi|259090577|gb|ACV91911.1| OprL [Pseudomonas fluorescens]
gi|259090579|gb|ACV91912.1| OprL [Pseudomonas fluorescens]
Length = 156
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 46/157 (29%), Gaps = 21/157 (13%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + N N E + I
Sbjct: 21 GCSSKGGDNAGEGAVDPNAGYGANTGAVDGSLSEEAALRA-------------------I 61
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + ++ +TD GT + N+ + + RA
Sbjct: 62 TTFYFEYDSSDLKPEAMRALDVHAKDLKAN-GARVVLEGNTDERGTREYNMALGERRAKA 120
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
++ YL+ + S + + + + P+ T +
Sbjct: 121 VQRYLVLQ-GVSPAQLELVSYGEERPVATGNDXQSWA 156
>gi|195940407|ref|ZP_03085789.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4024]
Length = 267
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 140 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 199
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 200 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 255
>gi|86361201|ref|YP_473088.1| outer membrane lipoprotein [Rhizobium etli CFN 42]
gi|86285303|gb|ABC94361.1| probable outer membrane lipoprotein [Rhizobium etli CFN 42]
Length = 178
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 1/118 (0%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ D I L+ + L A LNK P+ ++ +Q D
Sbjct: 51 ESVAPGSEEDFILSVGRRIYFKQDSAALDSVAMATLDNQAAWLNKNPTWLLKLQGFADDS 110
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+ +SQ+RAD +YL +GV R +G+ + + + N+R+
Sbjct: 111 GSAAQMQTLSQKRADAAMAYLTSKGVDPKRMW-AKGYGNDREVRDCTERSCKVQNRRV 167
>gi|226944839|ref|YP_002799912.1| flagellar motor protein [Azotobacter vinelandii DJ]
gi|226719766|gb|ACO78937.1| Flagellar motor protein [Azotobacter vinelandii DJ]
Length = 275
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 9/155 (5%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQ 97
K S+ D + QL I V ++ I + F S + L L +LQ
Sbjct: 119 DEKDVDSTGDPLQGLPVDQL-GKDIEVIVKEGTVSFRISSEILFSSAQADLSLDGLRVLQ 177
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFIS 153
+ +LN I + HTDS+ N +S RA + ++ + + +
Sbjct: 178 QLVPVLNS-SRHDIVVVGHTDSLPIRSTRFPSNWELSGARAGSVVR-YLEANGVARQRMR 235
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI-FPRGN 187
G A P+ N + GR N+R+E+ + P+
Sbjct: 236 AVGLADTRPLLENSSPEGRAGNRRVELILETPQAK 270
>gi|225873020|ref|YP_002754479.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
gi|225791412|gb|ACO31502.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
Length = 446
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 1/110 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I ++ L + A+ L P I I D GT + N+ + +RA
Sbjct: 332 NIQDAFFDYNQYNLRPDAQSAIAHDASYLESHPDIHITIAGFADERGTAEYNIWLGLQRA 391
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++ L + G+ R +V + + ++ T Q N+R + P
Sbjct: 392 LAVRRALAKDGIDMGRM-NVLSYGKEKQFCSDQTPACFQQNRRAHFMMDP 440
>gi|296103033|ref|YP_003613179.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295057492|gb|ADF62230.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 359
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + TD IG+ N +S++RA
Sbjct: 232 SDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRIGSDAYNQKLSEKRA 291
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YLI + IS RG P+ N D R ++R+EI++
Sbjct: 292 QSVVDYLISK-GIPANKISPRGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEV 347
>gi|291085616|ref|ZP_06353500.2| outer membrane protein A [Citrobacter youngae ATCC 29220]
gi|291070418|gb|EFE08527.1| outer membrane protein A [Citrobacter youngae ATCC 29220]
Length = 360
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 233 SDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 292
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YLI + IS RG P+ N D R ++R+EI++
Sbjct: 293 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEV 348
>gi|114327023|ref|YP_744180.1| outer membrane protein A [Granulibacter bethesdensis CGDNIH1]
gi|114315197|gb|ABI61257.1| outer membrane protein A [Granulibacter bethesdensis CGDNIH1]
Length = 361
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L + ++ A + +T I + +TD GT + N +S RA +
Sbjct: 258 VFFDWDRADLTARAREIVAEAARASTQVQATRIEVNGYTDKSGTPQYNQRLSVRRAQSVA 317
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L+ + I + GF +P+ V N+R+EI +
Sbjct: 318 AELV-KDGVPRNVIFIHGFGETHPLVPTAQGVREPQNRRVEIIL 360
>gi|119714995|ref|YP_921960.1| OmpA/MotB domain-containing protein [Nocardioides sp. JS614]
gi|119535656|gb|ABL80273.1| OmpA/MotB domain protein [Nocardioides sp. JS614]
Length = 302
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/177 (12%), Positives = 63/177 (35%), Gaps = 7/177 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-- 76
+ E+++ + + KR + + + + + + +
Sbjct: 107 AAVTAEERRRLQAQYAEAAAEAKRLEAVRKQLMKALRAAGLAKDVQATIDDRGLVVSLVS 166
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQE 132
V L + ++ ++ +L P+ + I HT+ + +S
Sbjct: 167 RHVVFEPDIAQLSARGERVVDTLSRVLRDVPNA-LRIDGHTNQEPVKPRFFATDWDLSAA 225
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA + L + G + +S+ F + P+ T ++ N+R++I + P+ + +
Sbjct: 226 RAVTVLRRLNEHGDVPKKRLSLSAFGNERPLVDPATPGSQEINKRVDIVVLPQTSYE 282
>gi|261380050|ref|ZP_05984623.1| OmpA family protein [Neisseria subflava NJ9703]
gi|284797260|gb|EFC52607.1| OmpA family protein [Neisseria subflava NJ9703]
Length = 253
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 76/213 (35%), Gaps = 32/213 (15%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF------GSSLDKAEDE 53
M K+L L ++F+ SG +AS K S+ + + + S DKA +
Sbjct: 1 MTKQLKLSALFVALVASGTAMASEAHTKHGYTVSSQSQEIVRNNYGECWKNSYFDKATEG 60
Query: 54 FQMQLQDTGIVVSRIG----DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ + D + + L + L +A L+
Sbjct: 61 RVECGDREAVAPVQQAPEYVDETVSLSSKTLFGFDKDNLRPEAQENLNALAQRLSNESVQ 120
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ ++ HTD +G+ + N +S+ RA+V+ +YL+ R ++ IS G T +
Sbjct: 121 TVRVEGHTDFMGSEQYNQALSERRANVVANYLVGR-GVASSKISAVGLGESQAQMTATCE 179
Query: 170 VGRQN--------------------NQRIEIQI 182
++R++++I
Sbjct: 180 AEVAKLGKKVSKAKKRAALIACIEPDRRVDVKI 212
>gi|94500908|ref|ZP_01307434.1| hypothetical protein RED65_11730 [Oceanobacter sp. RED65]
gi|94427027|gb|EAT12009.1| hypothetical protein RED65_11730 [Oceanobacter sp. RED65]
Length = 2033
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 7/146 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
S +A + + + + + L + + ++ + L
Sbjct: 806 DSPSEANQRTPVAITSALLSLVPENKEVHKPEEAPKFSSFSRDLSQADINAMKSVLEQLR 865
Query: 105 KFPSTVIAIQSHTDSIGTLK-------NNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
I + HTD++ K NN +S RA YL++ +++ G+
Sbjct: 866 GLEDLRIEVAGHTDNVPIAKRSRHIFNNNYELSLARARSAADYLMRELELGPEQVTISGY 925
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ P+ N + R N+R+E+ I
Sbjct: 926 GSQRPVTNNGNEQSRALNRRVEVNIL 951
>gi|90022072|ref|YP_527899.1| putative outer membrane protein [Saccharophagus degradans 2-40]
gi|89951672|gb|ABD81687.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 322
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 88 LEKKFLPMLQLIATILNKFPSTVI-AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
L L I ++ + I HTDS G NL +S+ RA+++ ++R
Sbjct: 193 LSPGLQRQLDKILALVKHDNKLRMFYIDGHTDSNGDRAENLELSKTRAELVS-TYLKRRG 251
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+I +R +YP+ +N T GR N+R+ +++
Sbjct: 252 IPEDWIVIRWHGERYPVASNATVNGRARNRRVTVRL 287
>gi|71907621|ref|YP_285208.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71847242|gb|AAZ46738.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 195
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 69/195 (35%), Gaps = 14/195 (7%)
Query: 1 MIKELG-LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL- 58
M K + +++ +S C + + + L++ + +L
Sbjct: 1 MNKTILCVALAGSLVLSACTTERVVLLPSADGGQSAVVVRDPAGEVLLNQPYAAVKRRLD 60
Query: 59 -----QDTGIVVSRIGDMITCYIPVH------VSFVSEVFLEKKFLPMLQLIATILNKFP 107
Q + V + P L ++ L I + +
Sbjct: 61 SNVGYQSSPEEVRERYANVLAAQPARPRSYVLYFEAGGNILTQESKAALVNIRKEIAERA 120
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
++ + + HTD +G+++ N +S +RA+ ++ LI+ S + G + P+
Sbjct: 121 ASEVMVIGHTDRVGSVEGNDKLSLQRAEGLRDLLIE-SGISAEKMEAVGRGERDPLVPTA 179
Query: 168 TKVGRQNNQRIEIQI 182
+V N+R+EI +
Sbjct: 180 DEVDEPKNRRVEINV 194
>gi|329894132|ref|ZP_08270117.1| OmpA/MotB domain protein [gamma proteobacterium IMCC3088]
gi|328923304|gb|EGG30624.1| OmpA/MotB domain protein [gamma proteobacterium IMCC3088]
Length = 228
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 70/219 (31%), Gaps = 38/219 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKK---------VFLHKSNDTDIVNKRFGS------ 45
M K++ + + + + S A+ +K + + V G+
Sbjct: 1 MKKQIVMGLIVASMASAGADAAEKKLNSPENIGFGSGLVAGAAIGGPVGGMIGALGGILL 60
Query: 46 ----SLDKAEDEFQMQLQD----------TGIVVSRIGDMITCYIP--------VHVSFV 83
+ +K E Q L D + I + + + +
Sbjct: 61 GNSITTEKTIAELQASLADNESALAAERASRIALEKRNAQLAASMERSRLELAMNVQFRT 120
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
LE + L+ + +L K S + + + D G N +S +R ++
Sbjct: 121 GSSELEPLYQQSLENMVELLKKDSSLQVTLSGYADRRGDEAFNEQLSAQRVAAVQQVFR- 179
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G I R F + P+D + G ++R+ I++
Sbjct: 180 NGGIHLNRIKTREFGERSPVDPTVSMDGHAFDRRVAIEV 218
>gi|329849879|ref|ZP_08264725.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19]
gi|328841790|gb|EGF91360.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19]
Length = 268
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 3/135 (2%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-ST 109
E L G + + F + L + ++ + +L + P
Sbjct: 134 EPAPAKPLNRAGQRCQDRINSAVAGGGIGYRF-NAYELTPQGERTMREVHRVLKRCPAEV 192
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ I +TD++G + N +S RA + + + ++ G P+ +N T
Sbjct: 193 KLTITGYTDNVGADEVNKSLSAGRAVDAMN-ALTAAGWPDDKVTAVGAGSADPVASNATA 251
Query: 170 VGRQNNQRIEIQIFP 184
GR+ N+R+ +
Sbjct: 252 AGRKKNRRVVFTLSS 266
>gi|322641772|gb|EFY38406.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
Length = 178
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 58/161 (36%), Gaps = 13/161 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K L +++ +M I+ C K S + G + + +
Sbjct: 6 VLKGLMIALPVM-AIAACSS----NKNASNDGSEGGMLNGAGTGMDANGNGNMSSEEQAR 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + +++ + + + F ML A L PS + ++ H D
Sbjct: 61 LQMQQLQQNNIV-------YFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER 113
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
GT + N+ + + RA+ + +Q S IS+ + K
Sbjct: 114 GTPEYNISLGERRANAV-KMYLQGKGVSADQISIVSYGKKN 153
>gi|212219430|ref|YP_002306217.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuK_Q154]
gi|215918885|ref|NP_819143.2| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
RSA 493]
gi|206583770|gb|AAO89657.2| peptidoglycan-associated lipoprotein [Coxiella burnetii RSA 493]
gi|212013692|gb|ACJ21072.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuK_Q154]
Length = 195
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 66/183 (36%), Gaps = 10/183 (5%)
Query: 1 MIKELGLSMFIMTTI--SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
++K GL++ + T+ SGC + + +Q QL
Sbjct: 17 LVKNSGLAVIALATLNLSGCKHHP------AGANAATGLSDGTGAQAYALAEGKGYQGQL 70
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ I ++ + L L +++ A L + + ++ +TD
Sbjct: 71 KKDS-EGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYLATHSTAKVRLEGNTD 129
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ G+ + N+ + R + ++++ + + I + + + P + + + N+R+
Sbjct: 130 NRGSREYNIGLGWRRDQAVAR-ILEQEGVAPKQIDMVSYGKERPAVMGNNENAWRLNRRV 188
Query: 179 EIQ 181
+
Sbjct: 189 NLI 191
>gi|46812309|gb|AAT02227.1| outer membrane protein A precursor [Shigella boydii]
Length = 346
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 219 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 278
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 279 QSVVDYLISK-GIPVDKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 334
>gi|317180579|dbj|BAJ58365.1| flagellar motor protein MotB [Helicobacter pylori F32]
Length = 257
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 72/209 (34%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P + F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD+ K++ ++ RA + LI + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDNTPLTKTRFKSHYELAANRAYRVMKVLI-QYGVNPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|304397573|ref|ZP_07379450.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB]
gi|304354745|gb|EFM19115.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB]
Length = 405
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 55/191 (28%), Gaps = 17/191 (8%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKS------------NDTDIVNKRFGSSLDKAEDEFQ 55
+ ++ + GC + S ++ T +L
Sbjct: 202 ACAMLVALIGCLIYSGLNWRLGNAAEPLLRAIYQTPLPQITAGRRPSSPQALLDLRQRLN 261
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + VS IP F + + +L ++ + T I +
Sbjct: 262 DVIAAGQLEVSDGAFGSKVIIPADKLFAEQGTVINPVGRALLARVSNAMKDVKGT-ILVS 320
Query: 115 SHTDSIGTLKNNLLIS---QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
TD + S + L+Q ++ + G P+ ND+
Sbjct: 321 VFTDDHPVDNSRFASSYEFSFARARTITQLLQVQLNDGHTVRSEGRGDSDPLLPNDSSEN 380
Query: 172 RQNNQRIEIQI 182
R N+R+EI +
Sbjct: 381 RTRNRRVEITL 391
>gi|163854962|ref|YP_001629260.1| peptidoglycan-associated lipoprotein [Bordetella petrii DSM 12804]
gi|163258690|emb|CAP40989.1| peptidoglycan-associated lipoprotein [Bordetella petrii]
Length = 167
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 1/114 (0%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + ++ +++ A L + IQ +TD G + NL
Sbjct: 52 NPQSVLAQQRSVYFDFDSYTVPDQYRGLVETHARYLASHQQQRVQIQGNTDERGGAEYNL 111
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ Q RAD ++ + S+ I F + P T T+ N+R +I+
Sbjct: 112 ALGQRRADAVRRMMTLL-GVSDAQIETISFGKEKPRATGTTEADFAENRRADIE 164
>gi|240948744|ref|ZP_04753116.1| lipoprotein Plp4 [Actinobacillus minor NM305]
gi|240296960|gb|EER47538.1| lipoprotein Plp4 [Actinobacillus minor NM305]
Length = 282
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L K ++ +A L + + + +TD +G++ NL +SQ RA+++
Sbjct: 142 DFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAQQVKVAGYTDRLGSVNYNLDLSQRRANMV 201
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN------NQRIEI 180
K+ L+Q+GV++ I G+ + D + G+ N+R+EI
Sbjct: 202 KARLVQQGVTAQ--IEAVGYGKANQVKACDGESGQALRDCLRPNRRVEI 248
>gi|89053467|ref|YP_508918.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88863016|gb|ABD53893.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 172
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 2/113 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ V + L +L A L P I+ H D GT + NL + R
Sbjct: 59 VVGDRVLFAVDQSTLSSGAQSVLAGQAQWLLSNPEFTALIEGHADEQGTREYNLALGARR 118
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
A ++ YL+ +GV R ++ + + P+ + N+R + + G
Sbjct: 119 AAAVREYLVSQGVPDARLRTIS-YGKERPLQICSDEACYSQNRRA-VTVISAG 169
>gi|84624549|ref|YP_451921.1| hypothetical protein XOO_2892 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84368489|dbj|BAE69647.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 438
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 43/143 (30%), Gaps = 9/143 (6%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDM--ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + + V GD + L+ +L+ +A L + P
Sbjct: 297 LAPLLAAEQRAGLLTVHTDGDGRSTVRLASASMFPSGSAELDADQTYLLERVAAALEQVP 356
Query: 108 STVIAIQSHTDSIGTLKNNLLI----SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + HTD S RA+ + + L R + G PI
Sbjct: 357 G-RVVVVGHTDDQPVRSLRFKDNFALSARRAESVGAVLAAGLRDR-RRVQTSGAGDSQPI 414
Query: 164 D-TNDTKVGRQNNQRIEIQIFPR 185
R N+R+EI + P
Sbjct: 415 ALPPQLPGNRARNRRVEILLIPE 437
>gi|89889916|ref|ZP_01201427.1| hypothetical protein BBFL7_01736 [Flavobacteria bacterium BBFL7]
gi|89518189|gb|EAS20845.1| hypothetical protein BBFL7_01736 [Flavobacteria bacterium BBFL7]
Length = 318
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 12/137 (8%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV---FLEKKFLPMLQLIATILNK 105
K+ + +L + + P+ + F + L + + + L+
Sbjct: 190 KSAALLENELDNLAADIRAN--------PLILHFATGASTINLSNEQREKISKMVHYLDA 241
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P + HTD+ G+ N IS RA+ KSYL++ S+ I G PI T
Sbjct: 242 RPQASLISVGHTDNTGSRSTNTTISANRAEFAKSYLVEN-GISSSRIESSGKGPDEPIAT 300
Query: 166 NDTKVGRQNNQRIEIQI 182
NDT+ G++ N+R+ + +
Sbjct: 301 NDTEEGKEQNRRVVVTL 317
>gi|312795445|ref|YP_004028367.1| outer membrane protein [Burkholderia rhizoxinica HKI 454]
gi|312167220|emb|CBW74223.1| Outer membrane protein [Burkholderia rhizoxinica HKI 454]
Length = 243
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + V+ +TD IG+ K N +S RA +
Sbjct: 102 DTLFDFDKAVLKPAGKEKLDDLASKIQDLNLEVVVATGYTDKIGSDKYNDHLSLRRAQAV 161
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIF 183
K+YL+ + + +NR I G + P+ T+ + R N+R+E+++
Sbjct: 162 KAYLVSKDIPANR-IYTEGKGKRNPVVTDCNQKNRKALIACLAPNRRVEVEVV 213
>gi|254695098|ref|ZP_05156926.1| flagellar motor protein MotB [Brucella abortus bv. 3 str. Tulya]
gi|261215449|ref|ZP_05929730.1| flagellar motor protein MotB [Brucella abortus bv. 3 str. Tulya]
gi|260917056|gb|EEX83917.1| flagellar motor protein MotB [Brucella abortus bv. 3 str. Tulya]
Length = 366
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 9/170 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD---MITCYIPV 78
+ KK + D+ G A + + VV G +T +
Sbjct: 199 QAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVVPVEGGVMSQLTDKVDY 258
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERAD 135
+ + + + + ML+ IA ++ + P + I HTD+ +N +S RA
Sbjct: 259 GMFTIGSAKPDARVVQMLERIAQVIARQPG-EVIISGHTDARPFKSATYDNWRLSSARAQ 317
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L++ G+ R + V G+A ++P + ND N+RI+I I +
Sbjct: 318 MAYYMLVRGGLDEKRVLRVEGYADRHPKNPNDPNA--AENRRIDIFIKSK 365
>gi|148653764|ref|YP_001280857.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148572848|gb|ABQ94907.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1]
Length = 213
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 65/173 (37%), Gaps = 11/173 (6%)
Query: 17 GCGL--ASREKKKVFLHKSNDTDIVNKRFGSSLDKAED----EFQMQLQDTGIVVSRIGD 70
GC S + K + + + ++ D ++ M + G S +
Sbjct: 21 GCQTVLTSTDSPKQIVTTAIEASQLDSDEDGVPDINDECPNTPQNMVVDPNGCPASLLPK 80
Query: 71 MITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KN 125
+ + + ++ K+ L A ++++P + I++H +
Sbjct: 81 EGSVRAEFRAFYDTNSSEIKSKYREELDRWAKKMDEYPDAYMLIEAHISEPEARLEENAS 140
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ ++ R + IK+YLIQ+ I ++ + PI ND G + NQR+
Sbjct: 141 HQTLALSRVEGIKNYLIQKHNIDPNRIRTYTYSAERPIAPNDDAEGIKLNQRV 193
>gi|15645435|ref|NP_207609.1| flagellar motor protein MotB [Helicobacter pylori 26695]
gi|3024164|sp|P56427|MOTB_HELPY RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
MotB
gi|2313948|gb|AAD07865.1| flagellar motor rotation protein (motB) [Helicobacter pylori 26695]
Length = 257
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 72/209 (34%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD K++ ++ RA + LI + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLI-QYGVNPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|308186600|ref|YP_003930731.1| type VI secretion system, core protein [Pantoea vagans C9-1]
gi|308057110|gb|ADO09282.1| Putative type VI secretion system, core protein [Pantoea vagans
C9-1]
Length = 405
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 55/191 (28%), Gaps = 17/191 (8%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKS------------NDTDIVNKRFGSSLDKAEDEFQ 55
+ ++ + GC + S ++ T +L
Sbjct: 202 ACAMLVALIGCLIYSGLNWRLGNAAEPLLRTIYQTPLPQITAGRRPSSPQALLDLRQRLN 261
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + VS IP F + + +L ++T + T I +
Sbjct: 262 DVIAAGQLEVSDGAFGSKVIIPADKLFAEQGTVINPVGRALLARVSTAMKDVKGT-ILVS 320
Query: 115 SHTDSIGTLKNNLLIS---QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
TD + S + L+Q + + G P+ ND+
Sbjct: 321 VFTDDHPVDNSRFASSYEFSFARARAITQLLQLQLEDGHTVRSEGRGDSDPLLPNDSSEN 380
Query: 172 RQNNQRIEIQI 182
R N+R+EI +
Sbjct: 381 RTRNRRVEITL 391
>gi|327393665|dbj|BAK11087.1| flagellar motor protein YiaD [Pantoea ananatis AJ13355]
Length = 405
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 42/137 (30%), Gaps = 5/137 (3%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPS 108
+ + VS IP F + + +L +++ +
Sbjct: 256 LRQRLNDVIAAGQLEVSDGAFGSKVIIPADKLFAEQGTVINPVGRAILARVSSAMKDVKG 315
Query: 109 T---VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
T + ++ S RA + L + ++ I G P+
Sbjct: 316 TILVSVFTDDKPVDGSRFASSYEFSFARARSVSQLLQVQLADTH-VIRSEGRGDSDPLLP 374
Query: 166 NDTKVGRQNNQRIEIQI 182
ND+ R N+R+EI +
Sbjct: 375 NDSSENRTRNRRVEITL 391
>gi|309244385|gb|ADO52197.1| OprL [Pseudomonas sp. AF32]
Length = 156
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 46/157 (29%), Gaps = 21/157 (13%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + N N E + I
Sbjct: 21 GCSSKGGDNAGEGAVDPNAGYGANTGAVDGSLSEEAALRA-------------------I 61
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + ++ +TD GT + N+ + + RA
Sbjct: 62 TTFYFEYDSSDLKPEAMRSLDVHAKDLKAN-GARVVLEGNTDERGTREYNMALGERRAKA 120
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
++ YL+ + S + + + + P+ T +
Sbjct: 121 VQRYLVLQ-GVSPAQLELVSYGEERPVATGNDXQSWA 156
>gi|152978942|ref|YP_001344571.1| SmpA/OmlA domain-containing protein [Actinobacillus succinogenes
130Z]
gi|150840665|gb|ABR74636.1| SmpA/OmlA domain protein [Actinobacillus succinogenes 130Z]
Length = 282
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L + ++ +A+ L + +++ +TD +G+ NL +SQ RAD +
Sbjct: 148 DFLFDFDKDTLTTEGKKVVDNVASQLKSSEAKEVSVAGYTDRLGSDAYNLDLSQRRADRV 207
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN------NQRIEIQ 181
K+ LI++GV + I+ G+ + + + G+ N+R+EI+
Sbjct: 208 KNRLIEQGV--SAQITATGYGKANQVKACEGERGQALINCLHPNRRVEIK 255
>gi|157146352|ref|YP_001453671.1| outer membrane protein A [Citrobacter koseri ATCC BAA-895]
gi|157083557|gb|ABV13235.1| hypothetical protein CKO_02111 [Citrobacter koseri ATCC BAA-895]
Length = 356
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 229 SDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 288
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YLI + IS RG P+ N D R ++R+EI++
Sbjct: 289 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEV 344
>gi|147001|gb|AAA24241.1| outer membrane protein II [Escherichia vulneris]
Length = 244
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 126 SDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 185
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 186 QSVVDYLISK-GIPSNKISARGMGESNPVTGNTCDNVKARPALIDCLAPDRRVEIEV 241
>gi|88858085|ref|ZP_01132727.1| putative chemotaxis protein [Pseudoalteromonas tunicata D2]
gi|88819702|gb|EAR29515.1| putative chemotaxis protein [Pseudoalteromonas tunicata D2]
Length = 321
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 7/148 (4%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK-KFLPMLQL 98
S + + ++ V D +T + + F S + +++
Sbjct: 119 GSPLESLNQELKTALFDHIEAGEAKVELDQDWLTIELSSGLLFGSGSAVATLNAKKVVKD 178
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY----LIQRGVSSNRFISV 154
I I+ + I I+ TD N L S + V ++ ++R + +++
Sbjct: 179 IYEIVKSVDNY-IRIRGFTDDRPI-NNELFSSNWQLSVARATEMLLQLERLGINPAQMAI 236
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G+ P +N+T+ GR N+++ I +
Sbjct: 237 EGYGEHSPTSSNETEEGRAANRKVVIAL 264
>gi|323436025|ref|ZP_01049805.2| peptidoglycan-associated lipoprotein [Dokdonia donghaensis MED134]
gi|321496340|gb|EAQ39777.2| peptidoglycan-associated lipoprotein [Dokdonia donghaensis MED134]
Length = 306
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ + E + Q L + + +I V L + L I L+
Sbjct: 174 AQAAEDEAKAQEDLANMAEAIKADPLVIYFDYSEA-----SVNLNAQQRKKLGNITRYLD 228
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
K + I ++ HTDS G++ N + ERA+ K YL G++ + +V + PI
Sbjct: 229 KVEGSSITVEGHTDSQGSMATNDRLGLERAEFGKQYLQNNGIAGAKIKTVT-KGERNPIA 287
Query: 165 TNDTKVGRQNNQRIEIQI 182
TNDT+ GR N+R I I
Sbjct: 288 TNDTEEGRTQNRRAVITI 305
>gi|90424373|ref|YP_532743.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
gi|90106387|gb|ABD88424.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 218
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 6/163 (3%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ + + + G+ LD E + +LQ G+ ++ D + +
Sbjct: 55 SGGDSVAEAGKAAVVCGVAGAVVGAQLDAYEQQLLNELQVAGVKMNVQQDARILEMEEPI 114
Query: 81 SF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
F ++ L L + I KF + I H+ S + L ++ +K
Sbjct: 115 LFSRADARLSSTSANRLIAVGKIFQKFNQRQVDIIGHSASDEADEVALARAKVVTSRLKE 174
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
R R P+ N T+ GR N+R+ I +
Sbjct: 175 MTGGRLPLRMR-----SKGSSEPVGDNRTETGRDRNRRVTIFV 212
>gi|332304548|ref|YP_004432399.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332171877|gb|AEE21131.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 368
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 66/177 (37%), Gaps = 14/177 (7%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK-AEDEFQMQLQDTGIVVSRIGDMITCY 75
GC LA+ + + D N S DK A ++ TG + +
Sbjct: 203 GCALAAT---------AVEADSDNDGVVDSQDKCANTPSSDKVDATGCSIFTEVE--VEE 251
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + + ++ A + +FPST I+ + + G N +S+ERA
Sbjct: 252 TLRILFANNSSEIANRANSDIRDFAAFMKRFPSTDTVIEGYASAPGESDYNQWLSEERAK 311
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI--FPRGNIKK 190
++ LI+ I+ G+ +D K + N+RI ++ R + K
Sbjct: 312 AVRMVLIEDYDIKPARITAVGYGESKLLDAPTAKEANKINRRIVARVSASKREKVTK 368
>gi|210135015|ref|YP_002301454.1| flagellar motor protein MotB [Helicobacter pylori P12]
gi|210132983|gb|ACJ07974.1| flagellar motor rotation protein MotB [Helicobacter pylori P12]
Length = 257
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 72/209 (34%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P + F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD+ K++ ++ RA + LI + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLI-QYGVNPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|269102192|ref|ZP_06154889.1| sodium-type flagellar protein MotY precursor [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162090|gb|EEZ40586.1| sodium-type flagellar protein MotY precursor [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 297
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L + L IA + ++ + ++TDS GT N +S+
Sbjct: 185 ISFTILHYDNDSEELNELSRKRLMQIADFVRAAKDVDLVLVATYTDSFGTKNENQDLSER 244
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ + Y I G+ +R I V+ F + I N+T +GR N+R+ I +
Sbjct: 245 RANKLHEYFISLGLPPDR-IKVQAFGERREIADNNTPIGRNLNRRVVISL 293
>gi|260597356|ref|YP_003209927.1| outer membrane protein A [Cronobacter turicensis z3032]
gi|260216533|emb|CBA29736.1| Outer membrane protein A [Cronobacter turicensis z3032]
Length = 355
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 13/168 (7%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+ D +++ + ED + T + ++
Sbjct: 178 DAQTVGARPDNGMLSVGVSYRFGQQEDAAPVVAPAPAPAPEVQTKHFTLK-SDVLFNFNK 236
Query: 86 VFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L+ + L + + L+ + + TD IG+ N +S++RA + YLI
Sbjct: 237 ATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDSYNQGLSEKRAQSVVDYLIS 296
Query: 144 RGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ + IS RG P+ N D R ++R+EI++
Sbjct: 297 K-GIPSNKISARGMGESNPVTGNTCDNVKPRAALIECLGPDRRVEIEV 343
>gi|254449145|ref|ZP_05062596.1| OmpA family protein [gamma proteobacterium HTCC5015]
gi|198261259|gb|EDY85553.1| OmpA family protein [gamma proteobacterium HTCC5015]
Length = 397
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN-LLISQERADVIKS 139
E L+ K L + + L K P + + +D+ ++S ER+D + +
Sbjct: 297 FKPREYQLDNKALQDVDRLVDFLQKNPQYKVVLAGFSDAAEEAAWRSYILSMERSDFVAN 356
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
LI++G+ + VRGF + +N ++ GR N+R+E+ +
Sbjct: 357 QLIKKGIVPS---VVRGFGSTLQVASNHSEKGRDKNRRVEVWV 396
>gi|330828822|ref|YP_004391774.1| OmpA family protein [Aeromonas veronii B565]
gi|328803958|gb|AEB49157.1| OmpA family protein [Aeromonas veronii B565]
Length = 306
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 72/178 (40%), Gaps = 11/178 (6%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL----QDTGIVVSRIG 69
+S + + + + G++L K + + Q + + +++
Sbjct: 80 AVSASPSLLESPASPSPSLAPISGVPVLQDGATLAKLDMQLQQSMGSLVDAGIVKLTQDE 139
Query: 70 DMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LK 124
+ +T + + F FL P++ +++IL + + ++ +TD+ +
Sbjct: 140 NWLTVELSSGLLFGSGSAFLGPNAAPVINTLSSILKPVDNY-VRVRGYTDNQQINNEIYR 198
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S RA+ + + LI + + ++ + P N ++ GR N+++ + I
Sbjct: 199 SNWALSAARAEAVLNGLIA-DGIAPQRLAFEAYGEFSPFADNGSEQGRLQNRKVVVAI 255
>gi|291617209|ref|YP_003519951.1| YiaD [Pantoea ananatis LMG 20103]
gi|291152239|gb|ADD76823.1| YiaD [Pantoea ananatis LMG 20103]
Length = 405
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 42/137 (30%), Gaps = 5/137 (3%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPS 108
+ + VS IP F + + +L +++ +
Sbjct: 256 LRQRLNDVIAAGQLEVSDGAFGSKVIIPADKLFAEQGTVINPVGRAILARVSSAMKDVKG 315
Query: 109 T---VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
T + ++ S RA + L + ++ I G P+
Sbjct: 316 TILVSVFTDDKPVDGSRFASSYEFSFARARSVSQLLQVQLADTH-VIRSEGRGDSDPLLP 374
Query: 166 NDTKVGRQNNQRIEIQI 182
ND+ R N+R+EI +
Sbjct: 375 NDSSENRTRNRRVEITL 391
>gi|68249712|ref|YP_248824.1| outer membrane protein P5 [Haemophilus influenzae 86-028NP]
gi|68057911|gb|AAX88164.1| Outer membrane protein P5 [Haemophilus influenzae 86-028NP]
Length = 359
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L + +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 242 SDVTFAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 301
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 302 VANYFVAK-GVAADAISATGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAV 355
>gi|15611819|ref|NP_223470.1| flagellar motor protein MotB [Helicobacter pylori J99]
gi|298736519|ref|YP_003729045.1| chemotaxis protein MotB [Helicobacter pylori B8]
gi|12229872|sp|Q9ZL29|MOTB_HELPJ RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
MotB
gi|4155316|gb|AAD06331.1| FLAGELLAR MOTOR PROTEIN [Helicobacter pylori J99]
gi|298355709|emb|CBI66581.1| chemotaxis protein MotB [Helicobacter pylori B8]
Length = 257
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 71/209 (33%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P + F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD+ K++ ++ RA + LI +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLI-QYGVDPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|307637506|gb|ADN79956.1| Flagellar motor rotation protein [Helicobacter pylori 908]
gi|325996095|gb|ADZ51500.1| Flagellar motor rotation protein [Helicobacter pylori 2018]
gi|325997691|gb|ADZ49899.1| Flagellar motor rotation protein [Helicobacter pylori 2017]
Length = 257
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 71/209 (33%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P + F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD+ K++ ++ RA + LI +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDNTPLIKTRFKSHYELAANRAYRVMKVLI-QYGVDPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|162451691|ref|YP_001614058.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161162273|emb|CAN93578.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 632
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 16/164 (9%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVS-RIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
D DK D+ G ++ GD I + + +
Sbjct: 355 DTDGDGVFDRDDKCPDKPAGPHGKDGCPLAFIRGDEIVIT-EQVHFATDKDIILEDSNST 413
Query: 96 LQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L+ +A +L P + I+ HTD T N+ +SQ R + +YLI + + +
Sbjct: 414 LEAVAQVLIDNPDIREVRIEGHTDVRATDLYNMALSQRRVASVMAYLIAK-GVESSRLQA 472
Query: 155 RGFAYKYPIDTND---------TKVGR---QNNQRIEIQIFPRG 186
G+ + PI + + + N+R+ +I G
Sbjct: 473 VGYGHTQPIYDDTGCQGPDDQLSPDCQFMTSKNRRVVFRILRYG 516
>gi|323136170|ref|ZP_08071252.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
gi|322398244|gb|EFY00764.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
Length = 288
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 65/176 (36%), Gaps = 30/176 (17%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
V + L + + + D +V+S D + + L ++
Sbjct: 87 AAVANQRERILKDLQSKLKADFPDLQVVISEEMDALRFK-GDGLFKTGSSELRPDKRRIV 145
Query: 97 QLIATILNKF-------PSTV--------------IAIQSHTDSIGTLKNNLLISQERAD 135
+ IAT L + P + + ++ HTDS G +N+ +S RA+
Sbjct: 146 ESIATRLGEVLPCYTLGPRSSWNSRCNAAGAVIEAVLVEGHTDSDGQDNSNITLSTNRAN 205
Query: 136 VIKSYLIQRGVSSNRF--------ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + F +SV G+ P+ N T+ G+ N+RI+++I
Sbjct: 206 ETFFAMTKHEPALVDFRNDRAQPVLSVAGYGRMRPVADNATQEGKATNRRIDLRII 261
>gi|319793801|ref|YP_004155441.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315596264|gb|ADU37330.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 215
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 58/154 (37%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
K L E L + + I+ + ++ L+ + +L+ +A
Sbjct: 56 KVEAERLQTLEQALAGPLAAGRVTLDNGRIGIS---GSVLFALNSAELQPEGRQLLKSLA 112
Query: 101 TILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L + + ++ + TD +N +S +RA + LI+ G+ S+
Sbjct: 113 APLAAYLQARNEMLMVSGFTDDRQVRGGNKQFADNWELSAQRALTVTRALIEEGIPSSSV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + + +N GR N+R+E+ P+
Sbjct: 173 FAAA-FGAEQAVASNADADGRSKNRRVEMAPTPK 205
>gi|307699909|ref|ZP_07636960.1| OmpA family protein [Mobiluncus mulieris FB024-16]
gi|307614947|gb|EFN94165.1| OmpA family protein [Mobiluncus mulieris FB024-16]
Length = 325
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 19/189 (10%), Positives = 50/189 (26%), Gaps = 14/189 (7%)
Query: 12 MTTISGCGLA-------SREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQDTGI 63
+ +SG A + + + + + E Q +
Sbjct: 73 LGLLSGSTSAVNLGSMMGNDTTTAAGQPERIQAMAEASHLNQIKQQVEQALAAAGQTGAL 132
Query: 64 VVSRIGDMITCYI--PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + + ++ +L +A +L P +AI+ + D
Sbjct: 133 QMRITEKGLVLGMVASDTYFKPGDAEVQPTAQAVLAALAPVLTGTPE-DVAIEGYADPNP 191
Query: 122 TLKNNLLISQERADVIKSYLI---QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ A ++ + G + + + + N+R+
Sbjct: 192 QYSAKYPSNYHLAAGRAIEVLIHLRNGGVPGSKLRTISYGADHQTQVEAGQDAWSLNRRV 251
Query: 179 EIQIFPRGN 187
+I I R
Sbjct: 252 DIVIMSRAK 260
>gi|90408691|ref|ZP_01216841.1| putative outer membrane protein OmpA [Psychromonas sp. CNPT3]
gi|90310205|gb|EAS38340.1| putative outer membrane protein OmpA [Psychromonas sp. CNPT3]
Length = 415
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + V+ + P L + + I I ++D++G++K N IS++RA
Sbjct: 292 VTNALFSVNSSQFKTN--PDLIDLIMKSLQSKEGNIIITGYSDNLGSVKYNQWISEKRAK 349
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
V+ +Y+I G+SS+R I V+ YP+ +N T GR N+R+E++
Sbjct: 350 VVANYIISEGISSSRLI-VKSEGEFYPVASNKTATGRAENRRVELK 394
>gi|146993|gb|AAA24237.1| outer membrane protein II [Escherichia vulneris]
Length = 244
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 126 SDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 185
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 186 QSVVDYLISK-GIPSNKISARGMGESNPVTGNTCDNVKARPALIDCLAPDRRVEIEV 241
>gi|262066235|ref|ZP_06025847.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
33693]
gi|291380091|gb|EFE87609.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
33693]
Length = 82
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 51/81 (62%)
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ + + ++ HTDSIG+ + N+ +S+ RA+ +K+ LI+ G++ R + + +YP+
Sbjct: 2 EQNNYEVTLEGHTDSIGSNQYNIGLSRRRAEAVKAKLIEFGLAEERIVGIEAKGEEYPVA 61
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
TN+T GR N+R+E ++ R
Sbjct: 62 TNETPEGRLQNRRVEFRLVQR 82
>gi|257092162|ref|YP_003165803.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044686|gb|ACV33874.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 176
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 63/175 (36%), Gaps = 12/175 (6%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
L + + +S C + + + ++ + + + D
Sbjct: 10 LCLACVLVLSACATTDKAPPGDSGQAAAAREQPSRVPATPVRVGSAKAPTPFADDE---- 65
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
V E ++ + +L+ A L + P V+ + HTD++G+ N
Sbjct: 66 --------TRRVVYFAFGETMIDSESADILRQNAQKLKEDPQLVVTLVGHTDNLGSAAYN 117
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L ++ +R + + L GV ++ + + + D++ R+ +R+E+
Sbjct: 118 LAVADKRIEAVSDRLRSLGVPRSQIRRLPVGSEQSSKQACDSEACRRTMRRVELV 172
>gi|126725971|ref|ZP_01741813.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
gi|126705175|gb|EBA04266.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
Length = 224
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 68/183 (37%), Gaps = 20/183 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE------DEF 54
M K+ + I+T+++ CG T NK GS LD+ +
Sbjct: 3 MFKKTF-TFIILTSVAACGSQQ-----------LITSNFNKPIGSELDEGRFGNPTMNNM 50
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + IP + L+ LQ AT + +FP +
Sbjct: 51 LIHSGQKSATFDLAQRFDSEVIPTVNFAFNSAKLDGAAQATLQQQATWIRQFPEVRFRVY 110
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
HTD +G + N + RA + ++ I +G+ +R +V F + PI T+ +
Sbjct: 111 GHTDLVGGNRFNKRLGLRRAQSVVNFFISQGIGRDRLEAVASFGEEQPIVFTQTEE--RQ 168
Query: 175 NQR 177
N+R
Sbjct: 169 NRR 171
>gi|256828444|ref|YP_003157172.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256577620|gb|ACU88756.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 198
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 60/199 (30%), Gaps = 19/199 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASRE-----------KKKVFLHKSNDTDIVNKRFGSSLDK 49
MI + L + + +GC + + + + +
Sbjct: 1 MIARILLLILCLAF-AGCATKGTTVVLLEDLDGSVGQVQVSTPAGTQHLSAAGHSTRVSD 59
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVH------VSFVSEVFLEKKFLPMLQLIATIL 103
+ + R + +P L + P+ +I +
Sbjct: 60 SSATPDALRTLDQKKIEREYGPVLQAMPTPPETFLLYFEFGRSELTAESKPVPPMIIEAI 119
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ S + I H+D+IG ++N +S ERA+ + LI + + V +
Sbjct: 120 TRRNSRDVRINGHSDTIGQREDNARLSLERAEGARDILI-KEGIDPSIMQVFSHGEGNLL 178
Query: 164 DTNDTKVGRQNNQRIEIQI 182
N+R+E+ +
Sbjct: 179 IPTADDTPEPRNRRVEVLV 197
>gi|307823763|ref|ZP_07653991.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307735057|gb|EFO05906.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 322
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 58/177 (32%), Gaps = 14/177 (7%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ +S T + + Q + G + + PV +
Sbjct: 144 PTQSPIDEGSQSAITQPQGEVTPDQAKGLTESAQPAGDSGFPTPAAEGKRSSQHEPVSLL 203
Query: 82 -----FVSEVFLEKKF--LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
F S + + + I ++ P + ++ H D + +
Sbjct: 204 VLGGGFFSSGQITPRANIQDAIDNIIPLIQTRPLDNVVVEGHADKWVPFGASPAQVSKLN 263
Query: 135 DVI-------KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I + ++++ ++ I V G P+ +N T GR N+R+EI++ P
Sbjct: 264 ENISLRRANAIAQVLKKKGIASDRIIVHGLGDTVPLASNLTYDGRMKNRRVEIKLLP 320
>gi|262274549|ref|ZP_06052360.1| sodium-type flagellar protein MotY precursor [Grimontia hollisae
CIP 101886]
gi|262221112|gb|EEY72426.1| sodium-type flagellar protein MotY precursor [Grimontia hollisae
CIP 101886]
Length = 292
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
V + L K + L IA + P ++ + ++TD+ G N +S+
Sbjct: 179 IAFTVLHYDENGAELNKASMARLAQIAEFVRYSPDIDLVLMATYTDNRGAKVANQRLSEI 238
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA +++Y + G+ +R I V + + PI N++ +GR N+R+ I +
Sbjct: 239 RAQKLEAYFMSLGLPKDR-IQVEAYGERRPIAENESPIGRNKNRRVVISL 287
>gi|212213380|ref|YP_002304316.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuG_Q212]
gi|212011790|gb|ACJ19171.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuG_Q212]
Length = 195
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 66/183 (36%), Gaps = 10/183 (5%)
Query: 1 MIKELGLSMFIMTTI--SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
++K GL++ + T+ SGC + + +Q QL
Sbjct: 17 LVKNSGLAVIALATLNLSGCKHHP------AGANAATGLSDGTGAQAYALAEGKGYQGQL 70
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ I ++ + L L +++ A L + + ++ +TD
Sbjct: 71 KKDS-EGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYLATHSTAKVRLEGNTD 129
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ G+ + N+ + R + ++++ + + I + + + P + + + N+R+
Sbjct: 130 NRGSREYNIGLGWRRDQAVAR-ILEQEGVAPKQIDMVSYGKERPAVIGNNENAWRLNRRV 188
Query: 179 EIQ 181
+
Sbjct: 189 NLI 191
>gi|162448918|ref|YP_001611285.1| ompA-family exported protein [Sorangium cellulosum 'So ce 56']
gi|161159500|emb|CAN90805.1| ompA-family exported protein [Sorangium cellulosum 'So ce 56']
Length = 195
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 63/188 (33%), Gaps = 14/188 (7%)
Query: 1 MIK----ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K L +S + +GCG + V + + E
Sbjct: 14 MTKLPALILVVSAPLAAFAAGCGSDPQPPANVASDVAPPPVAKTAAPPAPKQDTEKPTSG 73
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP--STVIAIQ 114
++ ++ GD +P +E + L +A P + +
Sbjct: 74 SIRIDDKILKACGD-----LPTARFAFDSTSIEGEAAGALDALARCFVSGPLKGKGMKLI 128
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
H D G + NL + Q+RA + YL ++G+ R I+ T + G
Sbjct: 129 GHADPRGETEYNLGLGQKRAGSVAEYLGKKGLDQGR-IATSSKGEFE--ATGTDEEGWAR 185
Query: 175 NQRIEIQI 182
+++++I +
Sbjct: 186 DRKVDILL 193
>gi|307826489|ref|ZP_07656672.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307732463|gb|EFO03357.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 238
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 58/177 (32%), Gaps = 14/177 (7%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ +S T + + Q + G + + PV +
Sbjct: 60 PTQSPIDEGSQSAITQPQGEVTPDQAKGLTESAQPAGDSGFPTPAAEGKRSSQHEPVSLL 119
Query: 82 -----FVSEVFLEKKF--LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
F S + + + I ++ P + ++ H D + +
Sbjct: 120 VLGGGFFSSGQITPRANIQDAIDNIIPLIQTRPLDNVVVEGHADKWVPFGASPAQVSKLN 179
Query: 135 DVI-------KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I + ++++ ++ I V G P+ +N T GR N+R+EI++ P
Sbjct: 180 ENISLRRANAIAQVLKKKGIASDRIIVHGLGDTVPLASNLTYDGRMKNRRVEIKLLP 236
>gi|261839369|gb|ACX99134.1| flagellar motor protein MotB [Helicobacter pylori 52]
Length = 255
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 73/209 (34%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + +
Sbjct: 83 ASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD K++ ++ RA + LI + ++
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLI-QYGANPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|326794724|ref|YP_004312544.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326545488|gb|ADZ90708.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 304
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ + L + L L+A +N PS I I HTD+IG+ ++N +S++
Sbjct: 181 IARTAALFPTNGADLTDRIKHRLDLVALYVNNDPSIQYIYIDGHTDTIGSRRDNRELSKK 240
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ I +YL+++GV ++ +S R +YP+ ++ T GR+ N+R+ I++
Sbjct: 241 RAEKITAYLLEQGVPADMIVS-RYHGERYPVASSRTNQGRERNRRVTIRL 289
>gi|306841271|ref|ZP_07473982.1| flagellar motor protein MotB [Brucella sp. BO2]
gi|306845424|ref|ZP_07477998.1| flagellar motor protein MotB [Brucella sp. BO1]
gi|306274167|gb|EFM55983.1| flagellar motor protein MotB [Brucella sp. BO1]
gi|306288673|gb|EFM60004.1| flagellar motor protein MotB [Brucella sp. BO2]
Length = 366
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 65/171 (38%), Gaps = 11/171 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV- 80
+ KK + D+ G A + + + V + + + V
Sbjct: 199 QAQPKKAETQEELIADLKKAATGEPAQNAGKAAKPEPMPD-VTVVPVEGGVMIQLTDKVD 257
Query: 81 ---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERA 134
+ + + + ML+ IA ++ + P + I HTD+ +N +S RA
Sbjct: 258 YGMFTIGSAKPDARVVQMLERIAQVIARQPG-EVIISGHTDARPFKSATYDNWRLSSARA 316
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L++ G+ R + V G+A + P N T N+RI+I I +
Sbjct: 317 QMAYYMLVRGGLDEKRVLRVEGYADRQPK--NPTDPNAAENRRIDIFIKSK 365
>gi|254447387|ref|ZP_05060853.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015]
gi|198262730|gb|EDY87009.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015]
Length = 204
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 53/150 (35%), Gaps = 10/150 (6%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL 103
+ + + L D I ++ F + L+ +LQ +A L
Sbjct: 48 EAEKQRRQALERALADPLASGRITFQDGRIGISGNLLFRINSADLQSGGNQVLQDLAEPL 107
Query: 104 NKF---PSTVIAIQSHT-----DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ ++ + T ++N +S +RA + L+++G+ +R +
Sbjct: 108 KVYLSQHDELLMVSGFTDDLSLHEDNLYRDNWGLSAQRALTVTRTLVEQGLPQDRLFAAA 167
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
F P N R N+R+EI PR
Sbjct: 168 -FGANAPTVPNRDAASRAKNRRVEISTVPR 196
>gi|94499552|ref|ZP_01306089.1| hypothetical protein RED65_00925 [Oceanobacter sp. RED65]
gi|94428306|gb|EAT13279.1| hypothetical protein RED65_00925 [Oceanobacter sp. RED65]
Length = 1644
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 5/146 (3%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK-FLPML 96
+V S + E ++ ++ + V + D + V +F +
Sbjct: 568 VVRTEVSDSEKQKAKEKIIEFKNQHVYVEKKPDGDVYNLFVTFAF-DRSQFKPDNSFEDF 626
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ + L ST + + HT SIGT + NL +S RA+ ++ L S R V G
Sbjct: 627 KELFNSLPS--STKLTLIGHTCSIGTAEYNLGLSLRRAESVRKALGFSDKDSERVF-VEG 683
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
P N T+ GRQ N+R+ QI
Sbjct: 684 RGMTDPAYDNSTEAGRQKNRRVVAQI 709
>gi|31747683|gb|AAO38325.1| Lfe140p2 [Leptospirillum ferrooxidans]
Length = 94
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A + P + I+ + + G+ + N +S+ RA+ + ++ + + +RG
Sbjct: 1 LAQFMRNAPKRNVIIEGYAYNTGSGEYNDTLSRRRAESV-REVLLNDGINPERMRIRGLG 59
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+YP+ T+ T GRQ N+R+EI + +
Sbjct: 60 SRYPVATDKTSAGRQANRRVEIIVSDKN 87
>gi|115523189|ref|YP_780100.1| flagellar motor protein MotB [Rhodopseudomonas palustris BisA53]
gi|115517136|gb|ABJ05120.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 423
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 15/151 (9%)
Query: 44 GSSLDKAEDEFQMQLQDTGI-----VVSRIGDMITCYIPVH----VSFVSEVFLEKKFLP 94
SS K + L G V + + + + +
Sbjct: 271 QSSASKLQAAINAALASLGAAHPATEVRETSEGLLINLTDDANYGMFANGSAEPTPGLVR 330
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGT---LKNNLLISQERADVIKSYLIQRGVSSNRF 151
L I ++++ VI ++ HTD +N +S RA + LI+ G+ + R
Sbjct: 331 TLDKITPLISQQRGLVI-VRGHTDDRPYRSADYDNWRLSTARAHMAFHMLIRGGLDAKRI 389
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G+A + P ND N+RIEI I
Sbjct: 390 ERIEGYADRRPKTPNDPSA--PQNRRIEILI 418
>gi|317153788|ref|YP_004121836.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316944039|gb|ADU63090.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 247
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 7/132 (5%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + + +IT +P V F +V L K + ++ + + I I +TD
Sbjct: 113 EGLVSANFEDGLITIRVPGDVMFGSGQVNLSPKGVELVTALKDFFIQHRDQNIKIIGYTD 172
Query: 119 SIGTLKN-----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+I KN N IS RA + L+ + ++ G AY PI N ++ R
Sbjct: 173 NISPGKNSRFLDNWEISALRAVNVLRELLG-MGIESTRLTATGLAYLNPIYPNTSEEFRA 231
Query: 174 NNQRIEIQIFPR 185
N+R+E + R
Sbjct: 232 KNRRVEFVLEKR 243
>gi|332533102|ref|ZP_08408971.1| flagellar motor rotation protein MotB [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037384|gb|EGI73838.1| flagellar motor rotation protein MotB [Pseudoalteromonas
haloplanktis ANT/505]
Length = 319
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 59/159 (37%), Gaps = 10/159 (6%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
K S L K + +++D + D + + + F S + + I
Sbjct: 120 GKPLDSLLIKLQSALIDEIRDGEASLELNQDWLIIELSSGMLFSSGSSVAHSRAKQVVKI 179
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI----QRGVSSNRFISVR 155
+ + ++ +TD N + S V ++ I + ++ +++
Sbjct: 180 VKDIIAPVDNYVRVRGYTDDESIR-NEIFRSNWELSVARATSILVELEALGINSARMAIE 238
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF-----PRGNIK 189
G+ P +NDT+ GR N+++ I + P+ +K
Sbjct: 239 GYGQYSPFASNDTEQGRAENRKVVIALSKYGLPPKQEVK 277
>gi|261492650|ref|ZP_05989203.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261494601|ref|ZP_05991082.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261309713|gb|EEY10935.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311809|gb|EEY12959.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 268
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G+ + + L K ++ +A L + + + +TD +G+ NL
Sbjct: 118 NGNSSFTLTGDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRLGSAAYNL 177
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN------NQRIEI 180
+SQ R++ +K+ L+Q+GV++ I G+ + D + G++ N+R+EI
Sbjct: 178 DLSQRRSNTVKARLVQQGVTAQ--IEAVGYGKANQVKACDGETGQELKDCLRPNRRVEI 234
>gi|329943865|ref|ZP_08292136.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328531571|gb|EGF58407.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 183
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 59/175 (33%), Gaps = 9/175 (5%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
+ A+ + + + + + + D+ + S G
Sbjct: 9 VAAATKSATADPTTIVKQPGSAGPGNPRVAQTVDRVVTPVSRSSSSDSAVTYSSDGQTTV 68
Query: 74 CYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ V+F L + +L I T N P + + HTDS+ N +S+
Sbjct: 69 ASLSGDVTFDVDSATLTDRAKQVLDEIVTRWNGKPPATVTVVGHTDSVADDAYNQTLSER 128
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND------TKVGRQNNQRIEIQ 181
RA + YL + ++ + G P+ + + G+ N+ ++++
Sbjct: 129 RAKAVADYLTSK--VASLNVQSSGKGESEPVASETNEDGSVNEAGKAANRHVDVR 181
>gi|319763679|ref|YP_004127616.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
gi|317118240|gb|ADV00729.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
Length = 217
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 53/156 (33%), Gaps = 15/156 (9%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
L E L + + D + + L+ + +L+ ++
Sbjct: 60 AEQARRLTTLEQALAGPLAAGRVTLQ---DGRIGISGSVLFAFNSDELQPEGRQLLRSLS 116
Query: 101 TILNKF---PSTVIAIQSHTDSIGTL--------KNNLLISQERADVIKSYLIQRGVSSN 149
L + ++ + TD +N +S +RA + LI G+ S
Sbjct: 117 APLAAYLRERGEILMVSGFTDDRPMRGGGGNARFADNWELSAQRALTVTRALIDEGIPSA 176
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + F + + +N GR N+R+E+ PR
Sbjct: 177 QVFAAA-FGAEQAVASNADAEGRARNRRVEMAPMPR 211
>gi|325287672|ref|YP_004263462.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324323126|gb|ADY30591.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 285
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 9/133 (6%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L D I +S ++ I + F + + +L +A ++N P ++ H
Sbjct: 138 LDDEDIEISVEKGVVFVSISDKLLFSSGSYNVATRAKEVLGKVAQVVNNKPDFEFMVEGH 197
Query: 117 TDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD++ K +N +S +RA + L + ++ G + P+ + D +
Sbjct: 198 TDAVPYRKGVLLDNWDLSVKRATAVVRILQNEYGVDPKRMTAAGRSQYIPVSSTD----K 253
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 254 ARNRRTRIVVLPK 266
>gi|170751735|ref|YP_001757995.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170658257|gb|ACB27312.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 337
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 13/140 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---T 109
Q+ + +GD + L+ + P L IA + + P+
Sbjct: 200 QILGNRPDIRVVGDRFVLQ-SEVLFPAGSATLKPEAGPELDRIAGAVSELAKQIPADLPW 258
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG----VSSNRFISVRGFAYKYPIDT 165
V+ + HTD+ + S ++ + + + + F P++
Sbjct: 259 VLRVDGHTDARPI-STSQFPSNWSLSAARAIAVVQFLAGKGIPPQHLLAGAFGEFQPLEA 317
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
T+ N+RIE+++ R
Sbjct: 318 GATEEAYARNRRIEMKLTER 337
>gi|167949850|ref|ZP_02536924.1| sodium-type flagellar protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 285
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ +L+ +A LN+ + I+ H D G K NL +S+ RA +K+YL+++G
Sbjct: 188 DLDASAKALLKELADYLNRDERVKSVRIEGHADDQGRRKYNLKLSERRAMAVKAYLVEQG 247
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V R ++ + P + ++ R N+R+ I +
Sbjct: 248 VEQAR-LATFHYGESRPKVRSRSQKARAKNRRVAILL 283
>gi|213967029|ref|ZP_03395179.1| OmpA family protein [Pseudomonas syringae pv. tomato T1]
gi|301385214|ref|ZP_07233632.1| OmpA family protein [Pseudomonas syringae pv. tomato Max13]
gi|302059607|ref|ZP_07251148.1| OmpA family protein [Pseudomonas syringae pv. tomato K40]
gi|302130155|ref|ZP_07256145.1| OmpA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213928351|gb|EEB61896.1| OmpA family protein [Pseudomonas syringae pv. tomato T1]
Length = 447
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 5/154 (3%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+S + + + G + + L+
Sbjct: 296 TQSAEGQAIVAQSGFVSQTVQALKVPPTAQMPADYQALARKAERLSVNFRFAQGSAKLDN 355
Query: 91 KFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
K L+ +A L + + + D+ L+S+ RA ++ LI+ GV+
Sbjct: 356 KAQQDLKRVAEYLKASGKLNQQVTLVGFGDAKSDPARAALLSRLRAMAVRRELIKSGVTF 415
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G + P+ TND GR N+R+E+ +
Sbjct: 416 RDIL---GLGDEMPVATNDIDDGRIKNRRVEVWV 446
>gi|254437176|ref|ZP_05050670.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198252622|gb|EDY76936.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 189
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 6/134 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D AE + G + + + E + Q + +
Sbjct: 59 DGAEGYMSPRRNRDGSPICMRSQICGVIPTDTLFANDEDRIANSDK---QRLMAFFQQAD 115
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I HTDS + + N+ +S RA ++ G R + +RGF + P TN
Sbjct: 116 AFGFLIYGHTDSNASDEYNIDLSNRRASMVAGVAQDAG---TRVVDIRGFGERRPAATNA 172
Query: 168 TKVGRQNNQRIEIQ 181
T+ GR N+R+E+
Sbjct: 173 TQDGRAQNRRVEVY 186
>gi|148553776|ref|YP_001261358.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
gi|148498966|gb|ABQ67220.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
Length = 373
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + + +L A + + H D G+ + N+ +SQ RAD +K
Sbjct: 267 VFFDWDKSDITAEAASILDNAANAYATTGQARVQLAGHADKSGSDQYNVGLSQRRADAVK 326
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+YL + + I+ F P+ V N+R+EI
Sbjct: 327 AYLAGK-GVPDSAITTEAFGESRPLVDTADGVREPQNRRVEIT 368
>gi|323700140|ref|ZP_08112052.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323460072|gb|EGB15937.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 273
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 35/129 (27%), Gaps = 12/129 (9%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ---------SHTDSIG 121
I + L + L +L + ++ G
Sbjct: 109 QILSINASLLFGPDGYTLSPEGRATLDRFLPLLEQVKYPLLLAGHTSDLRDELGMNYQPG 168
Query: 122 TLKNNLLISQERADV---IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
N +S + + + S + V GF P DT R N+R+
Sbjct: 169 DDSRNPDLSWKLSLNRTLAIYRYLLDKGMSPDMLRVEGFGKYRPHYPPDTPENRARNRRV 228
Query: 179 EIQIFPRGN 187
+I + R +
Sbjct: 229 DIVLDKRSS 237
>gi|309244377|gb|ADO52193.1| OprL [Pseudomonas cichorii]
Length = 156
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 21/157 (13%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + N N E + I
Sbjct: 21 GCSSKGGDNAGAGAVDPNAGYGANTGAVDGSLSEEAALRA-------------------I 61
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + L L + A L + ++ +TD GT + N+ + + RA
Sbjct: 62 TTFYFEYDSSDLKPEALRSLDVHAKDLKAN-GARVVLEGNTDERGTREYNIALGERRAKA 120
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
++ YL+ + S + + + + P+ T +
Sbjct: 121 VQRYLVLQ-GVSPAQLELVSYGEERPVATGNDXQSWA 156
>gi|223040101|ref|ZP_03610381.1| OmpA/MotB [Campylobacter rectus RM3267]
gi|222878578|gb|EEF13679.1| OmpA/MotB [Campylobacter rectus RM3267]
Length = 256
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 68/195 (34%), Gaps = 14/195 (7%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM------ 56
K+L ++ ++ G + + +D NK E +
Sbjct: 45 KKLEAAIGSLSGALGILESGVKPDAGAEQNQDDHATSNKERTGVKSNFEQTLRSINELLH 104
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFL-EKKFLPMLQLIATILNKFP-STVIAI 113
+ +P ++ F L L L+ IA ++ K P V +
Sbjct: 105 ASGSPEVTFEESESGFVIRLPANLLFDKDSARLQNDDALLFLKRIAMVIAKLPPDVVANV 164
Query: 114 QSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
HTDS K+N +S RA + + LI + + ++ A P TN T+
Sbjct: 165 IGHTDSEQPGSAEFKDNWQLSSARAISVVTELI-KDGVDPKKLTASAKAEFEPFATNFTE 223
Query: 170 VGRQNNQRIEIQIFP 184
GR+ N+R+EI
Sbjct: 224 QGREKNRRVEIHFVS 238
>gi|294787834|ref|ZP_06753078.1| OmpA family protein [Simonsiella muelleri ATCC 29453]
gi|294484127|gb|EFG31810.1| OmpA family protein [Simonsiella muelleri ATCC 29453]
Length = 229
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 76/214 (35%), Gaps = 34/214 (15%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-----SLDKAEDEFQ 55
M K+L LS ++ ++ G A + + +V +G LDKA +
Sbjct: 1 MTKQLKLSAMMVALLASTG-AMAQGVHGYTTSEQSGSVVRNNYGECWQNTYLDKANNSLT 59
Query: 56 M-------QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ T ++ + + + + + L + + L A L
Sbjct: 60 ECGGKPAPAPEPTVETITENKEEVISFQSNFLFGFDKSTLRSEAVAKLNETAAKLRGTEV 119
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTN 166
+ ++ HTD +G N +S+ RA+V+ +YL + IS G+ +
Sbjct: 120 QSVRVEGHTDFMGKDTYNQALSERRANVVANYLANQ-GVPAGKISAVGYGESQARMTASC 178
Query: 167 DTKVGR------------------QNNQRIEIQI 182
+V R + ++R++I++
Sbjct: 179 QAEVARMGKKVSAAKKRAALIACIEPDRRVDIRV 212
>gi|161520471|ref|YP_001583898.1| DotU family type IV/VI secretion system protein [Burkholderia
multivorans ATCC 17616]
gi|189353338|ref|YP_001948965.1| putative OmpA/MotB family outer membrane protein [Burkholderia
multivorans ATCC 17616]
gi|160344521|gb|ABX17606.1| type IV / VI secretion system protein, DotU family [Burkholderia
multivorans ATCC 17616]
gi|189337360|dbj|BAG46429.1| putative OmpA/MotB family outer membrane protein [Burkholderia
multivorans ATCC 17616]
Length = 405
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 58/183 (31%), Gaps = 12/183 (6%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+++ + G A+ ++ V + E + ++ + +
Sbjct: 227 VVAITAALLLGAAGYAAVDRWVVSREAQRLSPFDALARN-----LERRLRDEVAAGNVEL 281
Query: 66 SRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIG-- 121
R + FV + ++ + V+ + + DS
Sbjct: 282 IRDPARHVLTLRFAGMFVPGAVTVAPWGASVVASAGREIASIAEGMVVRVVGYADSAPAG 341
Query: 122 --TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+N +S+ RA+ + L+ + V G + N T+ GR N+R+E
Sbjct: 342 SARQVSNQALSEARAEDVARILVAA-GVPAHGLRVEGRGDADALADNGTESGRARNRRVE 400
Query: 180 IQI 182
+ +
Sbjct: 401 VIV 403
>gi|73539729|ref|YP_294249.1| OmpA [Ralstonia eutropha JMP134]
gi|72117142|gb|AAZ59405.1| OmpA [Ralstonia eutropha JMP134]
Length = 591
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 52/171 (30%), Gaps = 27/171 (15%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ T + GS+++ A + + V G L +
Sbjct: 125 GLDVTMVDIAADGSAMEPANRASEQGGIGLSVSVRDSGAG-----ANGQFASGSSVLTPE 179
Query: 92 FLPMLQLIATI---------------------LNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
IA + S I + HTD G+ + N +S
Sbjct: 180 ARVAFTEIAQQYAYPVQSRQLGPQSTPQDRQAVEGLKSRRILLIGHTDDTGSSRLNADLS 239
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++RA + + + + +G P+ N + GR N+R+EI
Sbjct: 240 EQRARAVAALFRDA-GVAESQLYYQGAGETMPLADNRDEAGRAKNRRVEIV 289
>gi|326796443|ref|YP_004314263.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326547207|gb|ADZ92427.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 280
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 57/140 (40%), Gaps = 6/140 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
+ +F Q + +S I+ + + F E L + + +L +I+ ILN +
Sbjct: 128 EVISSQFSSLTQSGKVSISENESWISLELKSGLLFGEGEYELTNEAVALLIVISNILNSY 187
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ----RGVSSNRFISVRGFAYKYP 162
PS + ++ +TD S +++ + + + I+ GF+ ++P
Sbjct: 188 PS-PVLVEGNTDDQPVSGAAPFSSNWSLSSLRASAVVDELVFRGVNPKLIAPIGFSSEHP 246
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
N R N+R+ ++I
Sbjct: 247 KVRNRNDDSRAQNRRVTLKI 266
>gi|89068018|ref|ZP_01155435.1| OmpA family protein [Oceanicola granulosus HTCC2516]
gi|89046257|gb|EAR52314.1| OmpA family protein [Oceanicola granulosus HTCC2516]
Length = 218
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 60/152 (39%), Gaps = 3/152 (1%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSE 85
+ + D + + S A D V + +P V+F
Sbjct: 18 TATVQTTLDAEAGSTYLASDFGAATVNNIAVQADGTNYVLILAQRFADEVPSMVNFAFDS 77
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L + +L + A+ +N+FP ++ HTD +G+ N + + RA + +YL RG
Sbjct: 78 ANLGPEARAILDVQASWINQFPELRFSVYGHTDLVGSDAYNRRLGERRARAVVAYLASRG 137
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
VS++R ++ F P+ R N+R
Sbjct: 138 VSTDRLEALVSFGETQPLVLTQDPE-RA-NRR 167
>gi|303325924|ref|ZP_07356367.1| putative chemotaxis MotB protein [Desulfovibrio sp. 3_1_syn3]
gi|302863840|gb|EFL86771.1| putative chemotaxis MotB protein [Desulfovibrio sp. 3_1_syn3]
Length = 235
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 43/131 (32%), Gaps = 6/131 (4%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ + +S + + V F V + +L + IL ++ + +
Sbjct: 93 MADAVPQSSSGISADDVGVQLRVNSDVMFKAGSVDFLPEGEKVLGSVLQILKEY-NLYLV 151
Query: 113 IQSHTDS---IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
++ H DS + +S RA + + + + + P+ +
Sbjct: 152 VRGHADSTEARPPYASAWELSGARAAAVL-HYLADHGVKPTRLRGVAYGDTRPLKPGIDE 210
Query: 170 VGRQNNQRIEI 180
R N+R+E
Sbjct: 211 ESRAVNRRVEF 221
>gi|260769131|ref|ZP_05878064.1| outer membrane protein [Vibrio furnissii CIP 102972]
gi|260614469|gb|EEX39655.1| outer membrane protein [Vibrio furnissii CIP 102972]
Length = 208
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 71/199 (35%), Gaps = 10/199 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVF-----LHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M L + ++S LA+ E +N D + + A D+
Sbjct: 1 MNIRTLLLAVMAVSLSRPLLANEEPNPDVYDYIQTPVANQMDDLLDDDNDGVINARDKCP 60
Query: 56 MQLQDTGIVVSRIGDMIT---CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ I G I + + + F+ ++ +A L +P I
Sbjct: 61 DTPAASQIDNEGCGTAIKSSHLQKLHILFANNSSTIPPVFMNQIRQMADFLKLYPEASIE 120
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+Q + +G +NL +S++R++ + + R + + I + G+ + +V
Sbjct: 121 LQGYASKVGKADHNLALSKQRSEAV-RLQLLRFGVTPKRIRIVGYGDTVLAVNGEDQVSH 179
Query: 173 QNNQRIEIQIFP-RGNIKK 190
N+R+ + +G I K
Sbjct: 180 AQNRRVTASVVGFKGEIVK 198
>gi|213961779|ref|ZP_03390045.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
gi|213955568|gb|EEB66884.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
Length = 330
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
Query: 67 RIGDMI--TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
GD + I + K L I L P+ I ++ HTDS G K
Sbjct: 208 NKGDNLANIFNIDNIYFDFGHTNIRKDASVQLAKIVAFLEDNPTLKIIVKVHTDSRGNDK 267
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIE 179
N +++ +A I+ +LI + ++ I +G+ ++ + T+ Q N+R+E
Sbjct: 268 YNRELTETQAKSIEQWLI-KRGIASHRIIAKGYGATQLVNGCEKGVPCTEEEHQANKRVE 326
Query: 180 IQI 182
+
Sbjct: 327 FIV 329
>gi|317047599|ref|YP_004115247.1| OmpA domain-containing protein transmembrane region-containing
protein [Pantoea sp. At-9b]
gi|316949216|gb|ADU68691.1| OmpA domain protein transmembrane region-containing protein
[Pantoea sp. At-9b]
Length = 356
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ + N +S++RA
Sbjct: 229 SDVLFNFNKATLKPEGQQALDQLYSQLSSLDPKDGSVVVLGFTDRIGSEQYNQKLSEKRA 288
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR-------QNNQRIEIQI 182
+ YL+ + IS RG P+ N D+ GR ++R+EI +
Sbjct: 289 QSVVDYLVSK-GIPANKISARGMGKSNPVTGNTCDSVKGRNALIDCLAPDRRVEIDV 344
>gi|313835693|gb|EFS73407.1| OmpA family protein [Propionibacterium acnes HL037PA2]
gi|314928364|gb|EFS92195.1| OmpA family protein [Propionibacterium acnes HL044PA1]
gi|314970216|gb|EFT14314.1| OmpA family protein [Propionibacterium acnes HL037PA3]
Length = 115
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + ++ ++ + S I + +TD+ G++ +NL +S+ RA
Sbjct: 8 SVLFDLDSDVVKPAGRQIIDRMVKQFVARKVSGKIGVTGYTDNSGSVAHNLDLSRRRAVS 67
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L + ++ G P+ +ND++ GR+ N+R+ I +
Sbjct: 68 VARLLGLQLSKGVTLVTA-GKGEADPVASNDSEAGRRLNRRVTITV 112
>gi|283784777|ref|YP_003364642.1| outer membrane protein A [Citrobacter rodentium ICC168]
gi|282948231|emb|CBG87798.1| outer membrane protein A [Citrobacter rodentium ICC168]
Length = 351
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 224 SDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDTYNQGLSEKRA 283
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YLI + IS RG P+ T D R ++R+EI++
Sbjct: 284 QSVVDYLISK-GIPADKISARGMGESNPVTGSTCDNVKARAALIDCLAPDRRVEIEV 339
>gi|330971267|gb|EGH71333.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 447
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 59/157 (37%), Gaps = 8/157 (5%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ + ++ + + Q+ ++R + ++
Sbjct: 296 AQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERLSVNFR---FAQGSAR 352
Query: 88 LEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ K L+ +A L + + D+ + L+S+ RA ++ L++RG
Sbjct: 353 LDNKAQQDLKRVADYLKSSDKLDRHVTLVGFGDAKSDPERAALLSRLRAMAVRRELLKRG 412
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V+ + G + P+ TN+ GR N+R+E+ +
Sbjct: 413 VTFRD---IVGLGDEMPVATNEIDDGRIKNRRVEVWV 446
>gi|167855024|ref|ZP_02477798.1| outer membrane protein precursor PalA [Haemophilus parasuis 29755]
gi|167853872|gb|EDS25112.1| outer membrane protein precursor PalA [Haemophilus parasuis 29755]
Length = 153
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 55/179 (30%), Gaps = 33/179 (18%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K ++ + ++ C ++ + T
Sbjct: 1 MKKLAKVLMIAAPAFVLAACSSSNDNASANASANAGQTF--------------------- 39
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G+ V + ++ + +L A L + + H D
Sbjct: 40 --GGMSVQD----LQTRYNTVYFDFDSYTVKAEDQQLLDAHAQYLVASKG-KVTVAGHAD 92
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RAD +K +L +G S+ ++ + + P ++ N+R
Sbjct: 93 ERGTPEYNIALGQRRADAVKDFLATKGASN---VATVSYGEEKPAVLGHSEADYSKNRR 148
>gi|66045711|ref|YP_235552.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|63256418|gb|AAY37514.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
Length = 447
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 59/157 (37%), Gaps = 8/157 (5%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ + ++ + + Q+ ++R + ++
Sbjct: 296 AQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERLSVNFR---FAQGSAR 352
Query: 88 LEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ K L+ +A L + + D+ + L+S+ RA ++ L++RG
Sbjct: 353 LDNKAQQDLKRVADYLKSSDKLDRHVTLVGFGDAKSDPERAALLSRLRAMAVRRELLKRG 412
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V+ + G + P+ TN+ GR N+R+E+ +
Sbjct: 413 VTFRD---IVGLGDEMPVATNEIDDGRIKNRRVEVWV 446
>gi|89073378|ref|ZP_01159902.1| hypothetical protein SKA34_20552 [Photobacterium sp. SKA34]
gi|89050865|gb|EAR56339.1| hypothetical protein SKA34_20552 [Photobacterium sp. SKA34]
Length = 166
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 61/177 (34%), Gaps = 20/177 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQD 60
+K+ + ++ +GC DT + + D + +L+
Sbjct: 1 MKKSLFVLCLLALFTGCST--------------DTYVSQENINKFDDLTVKKFLIAELKP 46
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I I + H F + L+ + + L ++ I I HTD
Sbjct: 47 KTIA---EDKKIYLSLISHFDF-DKAVLKPEDIKELDDFIAKIHSLSG-DILIAGHTDYQ 101
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ N +S R+ I+SYL R S+ V+ F K PI + N+R
Sbjct: 102 GSDSYNEALSLRRSHAIESYLKARIDESHYHFEVKYFGEKNPIVKGHSLKSNALNRR 158
>gi|317014225|gb|ADU81661.1| flagellar motor protein MotB [Helicobacter pylori Gambia94/24]
Length = 257
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 75/209 (35%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL--------------HKSNDTDIVNKRFGSSLDKA- 50
LS+ + I+ +++ K KV ++ +V ++
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 51 ------------EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
E + + + G V+ +I +P + F + + + + +
Sbjct: 83 ASESSKPASQNTETKTTIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD+ K++ ++ RA + LI +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLI-QYGVDPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|218459695|ref|ZP_03499786.1| hypothetical protein RetlK5_09429 [Rhizobium etli Kim 5]
Length = 91
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 99 IATILNKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+A + + V+ + HTD+ G ++N +S RA + +LI +GV ++R ++
Sbjct: 1 LAKEIPPEINWVLRVDGHTDNVPLGGTGRYRDNWELSSARATSVVKFLIGQGVPADRLVA 60
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
GF PI DT R N+RIE+++ +
Sbjct: 61 A-GFGEFQPIAPGDTPEARATNRRIELKLTEK 91
>gi|146311126|ref|YP_001176200.1| outer membrane protein A [Enterobacter sp. 638]
gi|145318002|gb|ABP60149.1| OmpA domain protein transmembrane region-containing protein
[Enterobacter sp. 638]
Length = 351
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + +TD IG+ N +S++RA
Sbjct: 224 SDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSEKRA 283
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + IS RG P+ T D R ++R+EI++
Sbjct: 284 QSVVDYLVSK-GIPANKISPRGMGESNPVTGATCDNVKPRAALIDCLAPDRRVEIEV 339
>gi|127512720|ref|YP_001093917.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
gi|126638015|gb|ABO23658.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 251
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 66/184 (35%), Gaps = 10/184 (5%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF---QMQLQDTGIVVS 66
I+ +G + + + T + +L + + Q + Q+ + ++
Sbjct: 61 AIIGAFTGGMIGQTVANDSEIKQQQATLAEQESRMMALKQQNEALLTVQQEYQEAKVELA 120
Query: 67 RIGDMITCYIPV------HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
++ + +E F L +A + P + + + D
Sbjct: 121 QLRQHQGTRLEELALGLNVQFKTGSSTVEPHFQSQLNEVADAMAISPQLKLDLTGYADRR 180
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G N +S++R ++SYL+ +GV R + + + P+ + ++R+ I
Sbjct: 181 GDSSYNQALSEQRVAEVRSYLVSKGVDEAR-LDAKAYGASAPVKDEQSFENDFFDRRVTI 239
Query: 181 QIFP 184
++ P
Sbjct: 240 KLLP 243
>gi|319795926|ref|YP_004157566.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315598389|gb|ADU39455.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 207
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 61/196 (31%), Gaps = 20/196 (10%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV--NKRFGSSLDKAEDEFQMQLQDTG 62
L + I ++ C + + +V K L K + +G
Sbjct: 13 LLSTALITALLAACSTPGTRVVLLPQADGKPSAVVVRAKDGEEVLSKPYQRATAAVGASG 72
Query: 63 IVVSRIGDMITCYIPVH---------------VSFVSEVFLEKKFLPML-QLIATILNKF 106
V D V L ++ + +A L +
Sbjct: 73 APVVDQADAAKVQAENKPLFDMRPPPPQRYTVFFEVGGTTLTPASQQIMTEALAAALAR- 131
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
I + HTD+ G ++N +S+ RA + +++ +NR + G +
Sbjct: 132 SGGDIVVTGHTDTKGNGESNDQLSRRRAQEVVQLFVEQRFPANR-VEAVGRGERDLAVPT 190
Query: 167 DTKVGRQNNQRIEIQI 182
+V N+R+ I++
Sbjct: 191 ADEVDEPRNRRVTIEV 206
>gi|251792331|ref|YP_003007056.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
gi|247533723|gb|ACS96969.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
Length = 346
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + +L I + + + + I + +TD IG+ N +SQ RA+
Sbjct: 229 SDVTFAFGKANLKPQAQSVLDGIYSEIAQVNNADIKVSGYTDRIGSDAYNQKLSQRRAET 288
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +YL+ + + IS G+ P+ D GR +++R+EI +
Sbjct: 289 VANYLVSK-GVAQNAISAAGYGKANPVTGTKCDAVKGRKALIACLADDRRVEIAV 342
>gi|116329294|ref|YP_799014.1| flagellar motor protein MotB [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330099|ref|YP_799817.1| flagellar motor protein MotB [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116122038|gb|ABJ80081.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116123788|gb|ABJ75059.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 275
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 59/186 (31%), Gaps = 16/186 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-PV 78
R ++ +S + K S A + F+ +++ + ++ + +
Sbjct: 66 SKGRLEEMGMNIESLPSQTTGKALSKSKKLATELFKPEVEAGKVKITEDERGLIISLVSA 125
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI------------GTLKNN 126
L L+ ++++ + + ++ H D+ NN
Sbjct: 126 DYFNPGSAILTDSIKITLRKASSLIKEL-DRFVRVEGHCDANALNPGVAPGKEERAYINN 184
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQNNQRIEIQIFP 184
++ RA Y+I + F P+ T + N+RI+I +
Sbjct: 185 WDLAGARAINATDYIINVEKLDPSWFQAVSFGAFRPLVIEYAGTPEAKAYNRRIDIVVMT 244
Query: 185 RGNIKK 190
+ K+
Sbjct: 245 EKSTKR 250
>gi|108563226|ref|YP_627542.1| flagellar motor protein MotB [Helicobacter pylori HPAG1]
gi|107836999|gb|ABF84868.1| flagellar motor rotation protein [Helicobacter pylori HPAG1]
Length = 257
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 73/209 (34%), Gaps = 35/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-------------------------HKSNDTDIVN 40
LS+ + I+ +++ K KV S +
Sbjct: 23 FLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQM 82
Query: 41 KRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPML 96
S E + + G V+ +I +P ++ F + + + + +
Sbjct: 83 ASESSKPASQNTETKAIIARKGEGSVLEQIDQGSILKLPSNLLFENATSDSINQDMMLYI 142
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ IA I+ K P V I ++ TD+ K++ ++ RA + LI + +
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDNTPLVKTRFKSHYELAANRAYRVMKVLI-QYGVNPNQ 201
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI ND+ R N R+EI
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEI 230
>gi|297538334|ref|YP_003674103.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
gi|297257681|gb|ADI29526.1| OmpA/MotB domain protein [Methylotenera sp. 301]
Length = 377
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 45/111 (40%), Gaps = 8/111 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADV 136
+ + L+ P+L + L + + + +TD IG+ N +S+ RA+
Sbjct: 254 EKLFGFDKSKLQDGAKPILDGVVAKLKEHSEFKLVMVTGYTDRIGSEAYNQKLSEHRANE 313
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR------QNNQRIEIQ 181
+K Y++ +G+ + R + G + G+ N+R+ I
Sbjct: 314 VKDYIVSQGIDAGR-LQAVGKGESEAVVDCKGIKGKKLISCLAPNRRVVIL 363
>gi|218676771|ref|YP_002395590.1| hypothetical protein VS_II1010 [Vibrio splendidus LGP32]
gi|218325039|emb|CAV26876.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 751
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTDSIGT 122
V + + S +K L + IL++ I I+ HT S G+
Sbjct: 582 EVKKGQHIFELRSTTFAFDRSNSD-NRKARDSLIELGGILSQIHRPIPITIKGHTCSRGS 640
Query: 123 LKNNLLISQERADVIKSYLIQ----RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
++ N +S+ERA I+ +++ + I G + P+ ND++ R+ N+R+
Sbjct: 641 IEYNQTLSEERAIYIRECILEGITSNQAAWKTCIRTIGLGERDPLVPNDSEDQRRRNRRV 700
Query: 179 EIQI 182
++ +
Sbjct: 701 DLLL 704
>gi|37704660|gb|AAR01602.1| OprF [Pseudomonas sp. MFY160]
Length = 316
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 61 TGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 209 ANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKTNSYGDIKNLADFMKQYPSTTTTVEGH 268
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+G N +S+ RA+ +K L + + + G+ P+
Sbjct: 269 TDSVGPDAYNQKLSERRANAVKQVLTNQYGVESARVQSVGYGESRPVA 316
>gi|225849650|ref|YP_002729884.1| OmpA family protein [Persephonella marina EX-H1]
gi|225646341|gb|ACO04527.1| OmpA family protein [Persephonella marina EX-H1]
Length = 235
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 55/137 (40%), Gaps = 4/137 (2%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ ++ + L + I + I + + L +K L+ +A L
Sbjct: 79 EIKNRIKRILPMHAYQIEAIENYIVVRLFNDVIFKPDSAELTEKSKKALRGVANALKALD 138
Query: 108 S--TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+ + I H + + +S +RA V+ YLI+ + I+V G+ P+ T
Sbjct: 139 KAYSEVLINGHAYVVTKGIDPWKLSIKRAVVVAQYLIE-HGVNPEKIAVTGYGNTKPVYT 197
Query: 166 NDTKVGRQNNQRIEIQI 182
+ + ++ N R+EI I
Sbjct: 198 WNHPLLKRRNDRVEIFI 214
>gi|217978313|ref|YP_002362460.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
gi|217503689|gb|ACK51098.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
Length = 337
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 18/187 (9%)
Query: 14 TISGCGLASRE-KKKVFLHKSNDTDIVNKRFGS---SLDKAEDEFQMQLQDTGIVVSRIG 69
+S + E + K+ S + ++ + + VS +G
Sbjct: 154 ALSASEKSGAESQAKIADLGSRLNIALAQKVQELARYRSDFFGRLRQ-ILGDRPGVSVVG 212
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-------TVIAIQSHTDSIG- 121
D + S+ L+ L +A+ L + +I + HTD
Sbjct: 213 DRFIFQ-SEVLFESSQAVLDTAGRAELDKLASALIELEHEIPPDIPWIIRVDGHTDKKPI 271
Query: 122 ---TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+N +S RA + YL+ + S + ++ GF P+D + + N+RI
Sbjct: 272 QSSQYPSNWSLSAARAIAVVQYLVSK-GVSPQRLAAAGFGEFQPLDPGEGDDANRRNRRI 330
Query: 179 EIQIFPR 185
E++I +
Sbjct: 331 ELKITEK 337
>gi|313683568|ref|YP_004061306.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994]
gi|313156428|gb|ADR35106.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994]
Length = 412
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 7/102 (6%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT------LKNNLLISQERADVIKSY 140
L + L+ A + + I +TD+I N ++S+ RA ++ Y
Sbjct: 311 ALSEVGKERLREWAQLFKAGGYKSVTINGYTDNIPPQRLKALYATNAILSEARAQMVADY 370
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + I V G P+ N+T+ GR N+RIE +
Sbjct: 371 LVS-IGVDSSAIKVNGRGDVDPVAPNETEEGRSKNRRIEFIL 411
>gi|242277509|ref|YP_002989638.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242120403|gb|ACS78099.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 241
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 65/190 (34%), Gaps = 24/190 (12%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ--------DTGIVVSRI 68
+ K + + D+ + F+MQL+ + +
Sbjct: 56 ASAMGVDVPPKGANDTYEGAPVARRVIS---DQQRNIFEMQLEMARLVGRESDALKIKMR 112
Query: 69 GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN- 126
D + + F + L +L IA L K P + ++ H+D+I
Sbjct: 113 PDSVAIVLKGGFFFPSGQADLTSGARRVLGKIAPTLAKSP-YQVVVEGHSDNIPIRSKQF 171
Query: 127 ---LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ------NNQR 177
+S RA + YL+ G S +R I V G A P N+ G N+R
Sbjct: 172 PSNWELSSARASAVARYLLDNGFSKDR-IKVLGMADTAPAYPNEDDNGNAIPANQKRNRR 230
Query: 178 IEIQIFPRGN 187
+ + ++P N
Sbjct: 231 VVLLVYPPKN 240
>gi|332667957|ref|YP_004450745.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332336771|gb|AEE53872.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 279
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + D PV+ + + K L+ +A + K + + HTD+ G
Sbjct: 163 TVEEVADGAIIRFPVNSTEKDY---DPKVDAYLEKLAKRVAKT-EERVELTGHTDNDGEA 218
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
NL + RA I+ L+ + IS P+ N T R NN+R+E+++
Sbjct: 219 DYNLKLGASRARQIRD-LLVKLGVKADLISTASKGETLPVAPNTTDENRHNNRRVEVRLI 277
Query: 184 PR 185
+
Sbjct: 278 KK 279
>gi|330446492|ref|ZP_08310144.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490683|dbj|GAA04641.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 279
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
V + L K L IA + ++ + S DS+ + +S+
Sbjct: 165 IAFSVLHYDENSDTLNKISQQRLAKIADFVRYSDDVDLVLVASFNDSLAGTTESQDMSEH 224
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ ++ Y G+ +R + + + + PI N T +GR N+R+ I +
Sbjct: 225 RAENLRKYFKSLGLPEDR-VQIEAYGKRRPIADNSTPIGRSLNRRVVISL 273
>gi|70732179|ref|YP_261935.1| OmpA family outer membrane protein [Pseudomonas fluorescens Pf-5]
gi|68346478|gb|AAY94084.1| outer membrane protein, OmpA family [Pseudomonas fluorescens Pf-5]
Length = 304
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ L+ + LQ++ + P+ + + H+D+ G N +S+
Sbjct: 171 VKQAEIGFPGGGIDLDARAKAKLQVMVDFIKADPTVNHVELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + + + I VR +YP+ N R N+R+ + +
Sbjct: 231 RALAVMEFFKAN-GLAENQIVVRFHGERYPLAPNTNAANRAKNRRVNVHL 279
>gi|308186299|ref|YP_003930430.1| Outer membrane protein A precursor [Pantoea vagans C9-1]
gi|308056809|gb|ADO08981.1| Outer membrane protein A precursor [Pantoea vagans C9-1]
Length = 356
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ + N +S++RA
Sbjct: 229 SDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRIGSEQYNQKLSEKRA 288
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR-------QNNQRIEIQI 182
+ YL+ + + IS RG P+ N D+ GR ++R+EI +
Sbjct: 289 QSVVDYLVSK-GIPSNKISARGMGKSNPVTGNTCDSVKGRNALIDCLSPDRRVEIDV 344
>gi|304397112|ref|ZP_07378991.1| OmpA domain protein transmembrane region-containing protein
[Pantoea sp. aB]
gi|304355261|gb|EFM19629.1| OmpA domain protein transmembrane region-containing protein
[Pantoea sp. aB]
Length = 356
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ + N +S++RA
Sbjct: 229 SDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRIGSEQYNQKLSEKRA 288
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR-------QNNQRIEIQI 182
+ YL+ + + IS RG P+ N D+ GR ++R+EI +
Sbjct: 289 QSVVDYLVSK-GIPSNKISARGMGKSNPVTGNTCDSVKGRNALIDCLSPDRRVEIDV 344
>gi|296410000|gb|ADH15776.1| OmpP6 [Haemophilus haemolyticus]
Length = 137
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 58/166 (34%), Gaps = 31/166 (18%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
+ ++ C ++ + + G S+ +
Sbjct: 3 SVAALAACSSSNND--------AAGNGAGQTFGGYSVSDLQQ------------------ 36
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ +E +++ +L A LN P+ + ++ +TD GT + N+ +
Sbjct: 37 ----RYNTVYFGFDKYNIEGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALG 92
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
Q RAD +K YL +GV + + +V + + P + N+
Sbjct: 93 QRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNR 137
>gi|260431085|ref|ZP_05785056.1| OmpA family protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260414913|gb|EEX08172.1| OmpA family protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 209
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 63/163 (38%), Gaps = 15/163 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ + +++ + ++GC + +I FG++ +L
Sbjct: 1 MNKWIITLGLSVAVAGC------------TREAGYEIDQGAFGNATLNNIQVMNGELTYG 48
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
I+ R + I L+ +L A + +FP + HTD++G
Sbjct: 49 QILAQRFAAEVPSQIN---FAFDSAQLDASAQRILLQQANWIKQFPEARFRVYGHTDAVG 105
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ N + RA+ + ++L+Q+G+S +R ++ F P+
Sbjct: 106 SQSYNYNLGLRRANAVVNFLVQQGISRSRLEALVSFGKTRPLV 148
>gi|83647690|ref|YP_436125.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83635733|gb|ABC31700.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 274
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 60/164 (36%), Gaps = 10/164 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + ++ T+ + D + + + P
Sbjct: 94 AGTPTDSTTTEVTSASTTEGNDMTVLVLDDATAAALEKEYGGA-----NQFAGVEPPQPR 148
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + L ++ + L+ A L+ P+ I I HTD+ G N +S+ERA +
Sbjct: 149 VIFYPLEKSNLNQEDMAALKQHADFLSVHPNYQIQIHGHTDASGQATYNERLSEERALRV 208
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
YL+ + + V G+ + P+ T + N+R+E+
Sbjct: 209 ADYLLNN-GARPEQVEVFGWGSREPLL---TSSHHEKNRRVELI 248
>gi|114764947|ref|ZP_01444120.1| OmpA family protein [Pelagibaca bermudensis HTCC2601]
gi|114542659|gb|EAU45683.1| OmpA family protein [Roseovarius sp. HTCC2601]
Length = 221
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
V +G+ +P V+F + L+ L+ A + +FP + HT
Sbjct: 54 NGDRRYVIDLGERFAEEVPTMVTFAFNSAQLDNGARATLREQANWIRQFPEVRFRVYGHT 113
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D +G+ N + RA + SYL +G+S R +V + P+ T + N+R
Sbjct: 114 DLVGSPAYNKRLGMARAQAVVSYLAAQGISRERLEAVVSYGETQPLIV--TSERERRNRR 171
>gi|325285434|ref|YP_004261224.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324320888|gb|ADY28353.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 645
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ +++ + +Q + + KFPS I + SHTDS G NL +SQ+
Sbjct: 530 LLQLSTIYFDLNKFDIRPDAEIEIQKVIVAMEKFPSLKIKVNSHTDSRGKDSYNLWLSQK 589
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
RA+ +Y+I +G+ ++R + GF ++ + T Q N+R E I
Sbjct: 590 RAEATVNYMISKGIDASR-LQGEGFGETKLVNKCENGVPCTVKEHQLNRRSEFIII 644
>gi|13473358|ref|NP_104925.1| hypothetical protein mlr3926 [Mesorhizobium loti MAFF303099]
gi|14024107|dbj|BAB50711.1| mlr3926 [Mesorhizobium loti MAFF303099]
Length = 343
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFP---ST 109
++ + +GD + + ++ +A + + P +
Sbjct: 205 EILADRENIRIVGDRFVFQ-SEVLFPTGSEVINDAGKVEMKKLADAIIELQKEIPPEINW 263
Query: 110 VIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S R+ + +LI+ GV +NR ++ GF P+D
Sbjct: 264 VLRVDGHTDNKPLSGTGRFRDNWELSTARSTSVVKFLIENGVPANRLVAA-GFGEFQPLD 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
DT R N+RIE+++ R
Sbjct: 323 PADTDEARNKNRRIELKLTER 343
>gi|330965346|gb|EGH65606.1| OmpA family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 451
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 5/154 (3%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+S + + + G + + L+
Sbjct: 300 TQSAEGQAIVAKSGFVSQTVQALKVPPTAQMPADYQALARKAERLSVNFRFAQGSARLDN 359
Query: 91 KFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
K L+ +A L + + + D+ L+S+ RA ++ LI+ GV+
Sbjct: 360 KAQQDLKRVAEYLKASGKLNQQVTLVGFGDAKSDPARAALLSRLRAMAVRRELIKSGVTF 419
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G + P+ TND GR N+R+E+ +
Sbjct: 420 RDIL---GLGDEMPVATNDIDDGRIKNRRVEVWV 450
>gi|330875090|gb|EGH09239.1| OmpA family protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 447
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 5/154 (3%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+S + + + G + + L+
Sbjct: 296 TQSAEGQAIVAQSGFVSQTVQALKVPPTAQMPADYQALARKAERLSVNFRFAQGSARLDN 355
Query: 91 KFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
K L+ +A L + + + D+ L+S+ RA ++ LI+ GV+
Sbjct: 356 KAQQDLKRVAEYLKASGKLNQQVTLVGFGDAKSDPARAALLSRLRAMAVRRELIKSGVTF 415
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G + P+ TND GR N+R+E+ +
Sbjct: 416 RDIL---GLGDEMPVATNDIDDGRIKNRRVEVWV 446
>gi|78485864|ref|YP_391789.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78364150|gb|ABB42115.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2]
Length = 248
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 7/137 (5%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVI 111
E Q + + + + P +SF E L+ F L+ + ++ + ++
Sbjct: 100 EKSQQESNIEVTIDEERQQVKVSFPERISFPTGEADLKPGFSVQLRKLKNLI--DNTILV 157
Query: 112 AIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
HTD ++N +S RA + LI + + V G A +P+D +
Sbjct: 158 KAIGHTDKRPISSDRFRSNWELSSARAAAVIQQLIDDKIITPDQAEVIGVADTHPVDEQE 217
Query: 168 TKVGRQNNQRIEIQIFP 184
N+R+E+ + P
Sbjct: 218 NDAAYALNRRVEVVLIP 234
>gi|301156596|emb|CBW16067.1| outer membrane protein A (3a;II*;G;d) [Haemophilus parainfluenzae
T3T1]
Length = 361
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I + + + +A+ +TD IG N+ +SQ RAD
Sbjct: 244 SDVTFAFGKANLKPQAKATLDGIYGEIAQINNANVAVAGYTDRIGKDAPNVKLSQRRADS 303
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +YL+ + + IS G P+ T D GR ++R+EI +
Sbjct: 304 VANYLVAK-GVPAQSISAVGHGKANPVTGSTCDAVKGRKALIACLAPDRRVEIAV 357
>gi|171319658|ref|ZP_02908751.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria MEX-5]
gi|171095111|gb|EDT40119.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria MEX-5]
Length = 404
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 66/184 (35%), Gaps = 14/184 (7%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
GL++ ++ G +A R + ++ D + + E + ++ + +
Sbjct: 228 GLAVALLLGAGGYAVADRWVRTKAPRRALPLDALARN-------LEQRLRDEVAAGNVEL 280
Query: 66 SRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTL 123
R T + + + + ++ + S + + + DS
Sbjct: 281 IRAPGSDTLTLRFGGMFAPGDAAVAPWGASVVASAGREIAVLTNSATVHVAGYADSTSAR 340
Query: 124 ----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+N +S+ RA + L+ VS+ ISV G + N T GR N+R+E
Sbjct: 341 STRQASNQALSEARARHVAQILVSADVSAPH-ISVEGNGDADSLADNGTAAGRARNRRVE 399
Query: 180 IQIF 183
+ I
Sbjct: 400 VTIT 403
>gi|90410854|ref|ZP_01218869.1| Putative sodium-type flagellar protein MotY [Photobacterium
profundum 3TCK]
gi|90328485|gb|EAS44783.1| Putative sodium-type flagellar protein MotY [Photobacterium
profundum 3TCK]
Length = 296
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
V + L K L I + ++ + +++DS G K N +S+
Sbjct: 183 IAFTVLHYDMDSDELNKPSQRRLAQITDFVRYSDDIDLVLLATYSDSTGGTKVNQSLSER 242
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA ++ Y + I V + + PI NDT +GR N+R+ I +
Sbjct: 243 RAKKLEEYFMSL-GLPKNRIQVEAYGKRRPIADNDTPIGRNKNRRVVISL 291
>gi|4579742|dbj|BAA75215.1| OmpA-like outer membrane protein [Aggregatibacter
actinomycetemcomitans]
Length = 346
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I + + + + + +TD IG+ N +SQ RA+
Sbjct: 229 SDVTFAFGKANLKPQAQNTLDGIYGEIAQVNNANVQVAGYTDRIGSDAYNQKLSQRRAET 288
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ +YL+ + S + IS G P+ N +++R+EI +
Sbjct: 289 VANYLVSK-GVSQQAISATGHGKANPVTGNKCDVVKGRKALIACLADDRRVEIAV 342
>gi|221196013|ref|ZP_03569060.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
gi|221202687|ref|ZP_03575706.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221176621|gb|EEE09049.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221182567|gb|EEE14967.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
Length = 405
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 58/183 (31%), Gaps = 12/183 (6%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+++ + G A+ ++ V + E + ++ + +
Sbjct: 227 VVAITAALLLGAAGYAAVDRWVVSREAQRLSPFDALARN-----LERRLRDEVAAGNVEL 281
Query: 66 SRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIG-- 121
R + FV + ++ + V+ + + DS
Sbjct: 282 IRDPAHHVLTLRFAGMFVPGAVTVAPWGASVVASAGREIASIAEGAVVRVVGYADSAPAG 341
Query: 122 --TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+N IS+ RA+ + L+ + V G + N T+ GR N+R+E
Sbjct: 342 SARQISNQAISEARAEDVARILVAA-GVPAHGLRVEGRGDADALADNGTESGRARNRRVE 400
Query: 180 IQI 182
+ +
Sbjct: 401 VIV 403
>gi|322435205|ref|YP_004217417.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
gi|321162932|gb|ADW68637.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
Length = 281
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 37/107 (34%), Gaps = 1/107 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + L AT +++ P+ I + + D G+ + NL + + RA+
Sbjct: 174 VQDVFFDYDSIELRPDGQTAAVQAATYMSQHPNLHILVGGYCDERGSAEYNLALGENRAN 233
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + I + + T + Q N+R + I
Sbjct: 234 -AAKTALVNAGVAANRIRTISYGKEKQFCTEANEACWQQNRRAQFSI 279
>gi|170748097|ref|YP_001754357.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170654619|gb|ACB23674.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 401
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 55/169 (32%), Gaps = 10/169 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A S + + K + V + + + +
Sbjct: 231 AEGPPVNGPSQASGQGVASAAALKAEIAKIFPPPAPGTSGPRVEVQGTPEGLLINVTDDL 290
Query: 81 SFV----SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQER 133
+F + + ++ +A L P I ++ HTDS +N +S R
Sbjct: 291 NFSMFAVGSAEPRPETVRAMERLAKALAARPG-RIVVRGHTDSRPFRSEVYDNWRLSTAR 349
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A + L + G+ R V G A + P + D K N+RIEI +
Sbjct: 350 AHMASYMLTRAGIDEARIWRVEGAADRMPRNAADPKA--PENRRIEILL 396
>gi|114765941|ref|ZP_01444955.1| OmpA/MotB domain protein [Pelagibaca bermudensis HTCC2601]
gi|114541755|gb|EAU44793.1| OmpA/MotB domain protein [Roseovarius sp. HTCC2601]
Length = 248
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 53/169 (31%), Gaps = 10/169 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE-------FQMQLQDTGIVVSRIGDMI 72
A + + +S D A D +V ++ +
Sbjct: 80 TAPQVATTAPELAAPSGSGQGVSISASSDSAPQRPADPNRPLLAAASDAPMVFGQLAPEL 139
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + F + P LQ + L I I HTDS G+ N +S
Sbjct: 140 QVNLHIEFGF-DSAAISDDQKPKLQTVCMALMAADVGKIRIVGHTDSAGSDAYNETLSVL 198
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA + LI+ + G ++P + + + N+R+E Q
Sbjct: 199 RAKEVARNLIEECGLPPSRLETVGMGERFPFNEANPRAD--ENRRVEFQ 245
>gi|261868235|ref|YP_003256157.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|2828561|gb|AAC00068.1| outer membrane protein 34 [Aggregatibacter actinomycetemcomitans]
gi|261413567|gb|ACX82938.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 346
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I + + + + + +TD IG+ N +SQ RA+
Sbjct: 229 SDVTFAFGKANLKPQAQNTLDGIYGEIAQVNNANVQVAGYTDRIGSDAYNQKLSQRRAET 288
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ +YL+ + S + IS G P+ N +++R+EI +
Sbjct: 289 VANYLVSK-GVSQQAISATGHGKANPVTGNKCDAVKGRKALIACLADDRRVEIAV 342
>gi|322832273|ref|YP_004212300.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
gi|321167474|gb|ADW73173.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
Length = 358
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ + N +S++RA
Sbjct: 231 SDVLFNFNKATLKPEGQQALDQLYSQLSSIDPKDGSVIVLGYTDRIGSEQYNQKLSEQRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + IS +G P+ T D+ GR ++R+EI++
Sbjct: 291 QSVVDYLVSK-GIPANKISAQGQGKSNPVTGSTCDSVKGRAALIDCLAPDRRVEIEV 346
>gi|332297504|ref|YP_004439426.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
gi|332180607|gb|AEE16295.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
Length = 1044
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 60/146 (41%), Gaps = 27/146 (18%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP---------------MLQLIATILNKFP 107
++V R+GD++ +P + + K + +++ IA ILNKF
Sbjct: 898 VLVIRVGDVLKIQVPSIIFRSDNADFKGKDVEPKNGLDQAIIDNNIRVIKRIAEILNKFK 957
Query: 108 STVIAIQSHTDSIGTLKNNL-----------LISQERADVIKSYLIQRGVSSNRFISVRG 156
+ I+ H +++ + +S+ RA +K LI+ GV +R ++ G
Sbjct: 958 DYTVRIEGHANNVTGTEAEETSTANGNIPLVPLSEARAQTVKKMLIEFGVDGSR-LTTVG 1016
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ P+ K N+R+E +
Sbjct: 1017 IGGRQPVVPRSDKDNWWKNRRVEFIL 1042
>gi|325287615|ref|YP_004263405.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324323069|gb|ADY30534.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 366
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 55/171 (32%), Gaps = 14/171 (8%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
K S V K + K + + +V I
Sbjct: 204 TKTVLDKDAFTTSVSVPAVTKTITKEVLKQKGGLTTWSEVECSLVQYQALPINWN----- 258
Query: 81 SFVSEVFLEKKFLPMLQ-LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
L + ++ + +LN+ P + I SHTDS G +N +S+ RA +
Sbjct: 259 --TGSSTLTAEAKRIIDSRLMPVLNQNPGVKLEIASHTDSRGNSVSNQSLSERRAKSVAD 316
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
YLI + ++ + G+ + T+ N+R E ++
Sbjct: 317 YLISK-GVNSSLLVANGYGENKLKNRCKDGVSCTEREHAANRRTEFRLINN 366
>gi|288957826|ref|YP_003448167.1| peptidoglycan-associated lipoprotein [Azospirillum sp. B510]
gi|288910134|dbj|BAI71623.1| peptidoglycan-associated lipoprotein [Azospirillum sp. B510]
Length = 155
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 32/167 (19%)
Query: 18 CGLASRE--KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
C + + + R GS+ D V +GD +
Sbjct: 17 CESTPNDAANS------AATGAQQSIRPGSAED---------------FVVNVGDRV--- 52
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L + L A L + S + ++ H D GT + NL + + RA+
Sbjct: 53 ----FFGLDRFDLSPEARATLDRQAKWLQTYGSVTVTVEGHADERGTREYNLALGERRAN 108
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IEIQ 181
+K+YL +G+ ++R ++V + + P + N+R + +
Sbjct: 109 SVKNYLAAKGIPASR-VNVVSYGKERPAVVGSNEAAWSQNRRGVTVV 154
>gi|148826224|ref|YP_001290977.1| outer membrane protein P5 [Haemophilus influenzae PittEE]
gi|148716384|gb|ABQ98594.1| Outer membrane protein P5 [Haemophilus influenzae PittEE]
Length = 238
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I +++ S +A+ +TD IG+ N+ +SQERAD
Sbjct: 121 SDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADS 180
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + + IS G+ P+ T D GR ++R+EI +
Sbjct: 181 VANYFVAK-GVAADAISATGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAV 234
>gi|37704624|gb|AAR01584.1| OprF [Pseudomonas sp. MFY70]
gi|37704664|gb|AAR01604.1| OprF [Pseudomonas sp. MFY162]
Length = 298
Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P+T + + HTDS+G N +SQ RAD +
Sbjct: 213 DVKFDFDKAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLSQRRADAV 272
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPID 164
K ++ + + ++ G+ P+
Sbjct: 273 KQ-VLVKDGVAPSRVTAVGYGESRPVA 298
>gi|254497974|ref|ZP_05110737.1| flagellar motor protein MotB [Legionella drancourtii LLAP12]
gi|254352751|gb|EET11523.1| flagellar motor protein MotB [Legionella drancourtii LLAP12]
Length = 293
Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 72/190 (37%), Gaps = 21/190 (11%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRI 68
K + + ++ L++ + E + +Q+ + V
Sbjct: 104 STTKMNDSKDAKPQDIEVIQSSQTQTQKLEELKSEINLSIQNDPSLNGLKDRMLMEVVHD 163
Query: 69 GDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN- 125
G I + V L +F P+ I+ +LN P+ + IQ +TD+
Sbjct: 164 GLRIQLIDNQKNPMFDVGSEKLNPQFEPIFTKISKLLNGVPN-KVTIQGYTDAHPYHNPD 222
Query: 126 -----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
N +S +RA+ + LI+ G+ N+ + V GF+ P+D D N+RI I
Sbjct: 223 ELEYTNWELSTQRANAARRALIKAGLDENKVMKVSGFSSTMPLDKKDPF--NAINRRISI 280
Query: 181 QIFPRGNIKK 190
+ G + K
Sbjct: 281 IVMKPGAVDK 290
>gi|257487833|ref|ZP_05641874.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|331008545|gb|EGH88601.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 447
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 5/152 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
S + + + G + + L+ K
Sbjct: 298 SAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFRFAQGSAKLDNKA 357
Query: 93 LPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L+ +A L + + + D+ L+S+ RA ++ L+ + + R
Sbjct: 358 QQDLKRVAEYLKTSNQLNQHVTLVGFGDAKSDPARAALLSRLRAMAVRRELL-KSGVTFR 416
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I G + P+ TN+ GR N+R+E+ +
Sbjct: 417 DI--VGLGDEMPVATNEIDDGRIKNRRVEVWV 446
>gi|152990728|ref|YP_001356450.1| hypothetical protein NIS_0983 [Nitratiruptor sp. SB155-2]
gi|151422589|dbj|BAF70093.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 225
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 10/116 (8%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV---IAIQSHTDS------IGTLKNN 126
V + L + L+ IA +L K P I I + + +
Sbjct: 106 FNDIVFKDTSYQLTDRAKQTLKEIAQVLKKLPKNQKFYIKINGYATIKDASKLPPDIVDA 165
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S +RA+ + YL+++G+ +RF + G+ PI + + + + N R+EI I
Sbjct: 166 WDLSIKRAEAVAFYLMKQGIDPSRFF-ISGYGDTRPIYSWNNPLLNRRNDRVEIYI 220
>gi|331014336|gb|EGH94392.1| OmpA family protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 447
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 5/154 (3%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+S + + + G + + S L+
Sbjct: 296 TQSAEGQAIVAQSGFVSQTVQALKVPPTAQMPADYQALARKAERLSVNFRFAQSSARLDN 355
Query: 91 KFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
K L+ +A L + + + D+ L+S+ RA ++ LI+ GV+
Sbjct: 356 KAQQDLKRVAEYLKASGKLNQQVTLVGFGDAKSDPARAALLSRLRAMAVRRELIKSGVTF 415
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G + P+ TND GR N+R+E+ +
Sbjct: 416 RDIL---GLGDEMPVATNDIDDGRIKNRRVEVWV 446
>gi|254706492|ref|ZP_05168320.1| flagellar motor protein MotB [Brucella pinnipedialis M163/99/10]
Length = 284
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 11/171 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV- 80
+ KK + D+ G A + + + V + + + V
Sbjct: 117 QAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPD-VTVVPVEGGVMIQLTDKVD 175
Query: 81 ---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI---SQERA 134
+ + + + ML+ IA ++ + P + I HTD+ S RA
Sbjct: 176 YGMFTIGSAKPDARVVQMLERIAQVIARQPG-EVIISGHTDARPFKSATYDNRRLSSARA 234
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L++ G+ R + V G+A ++P + ND N+RI+I I +
Sbjct: 235 QMAYYMLVRGGLDEKRVLRVEGYADRHPKNPNDPNA--AENRRIDIFIKSK 283
>gi|330824057|ref|YP_004387360.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
K601]
gi|329309429|gb|AEB83844.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
Length = 912
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 53/156 (33%), Gaps = 15/156 (9%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
L E L + + D + + L+ + +L+ ++
Sbjct: 755 AEQARRLTTLEQALAGPLAAGRVTLQ---DGRIGISGSVLFAFNSDELQPEGRQLLRSLS 811
Query: 101 TILNKF---PSTVIAIQSHTDSIGTL--------KNNLLISQERADVIKSYLIQRGVSSN 149
L + ++ + TD +N +S +RA + LI G+ S
Sbjct: 812 APLAAYLRERGEILMVSGFTDDRPMRGGGGNARFADNWELSAQRALTVTRALIDEGIPSA 871
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + F + + +N GR N+R+E+ PR
Sbjct: 872 QVFAAA-FGAEQAVASNADAEGRARNRRVEMAPMPR 906
>gi|297518161|ref|ZP_06936547.1| outer membrane protein A [Escherichia coli OP50]
Length = 171
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 44 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 103
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 104 QSVVDYLISK-GIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 159
>gi|153840578|ref|ZP_01993245.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus AQ3810]
gi|149745760|gb|EDM56890.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus AQ3810]
Length = 245
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 87 FLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L K L IA + ++ + ++TDS + +S+ RA+ +++Y G
Sbjct: 145 QLTKASKKRLAQIADYVRHNQDIDLVLVATYTDSTDGKSESQSLSERRAESLRTYFESLG 204
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +R I V+G+ + PI N T +G+ N+R+ I +
Sbjct: 205 LPEDR-IQVQGYGKRRPIADNGTPIGKDKNRRVVISL 240
>gi|261313945|ref|ZP_05953142.1| flagellar motor protein MotB [Brucella pinnipedialis M163/99/10]
gi|261302971|gb|EEY06468.1| flagellar motor protein MotB [Brucella pinnipedialis M163/99/10]
Length = 283
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 11/171 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV- 80
+ KK + D+ G A + + + V + + + V
Sbjct: 116 QAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPD-VTVVPVEGGVMIQLTDKVD 174
Query: 81 ---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI---SQERA 134
+ + + + ML+ IA ++ + P + I HTD+ S RA
Sbjct: 175 YGMFTIGSAKPDARVVQMLERIAQVIARQPG-EVIISGHTDARPFKSATYDNRRLSSARA 233
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L++ G+ R + V G+A ++P + ND N+RI+I I +
Sbjct: 234 QMAYYMLVRGGLDEKRVLRVEGYADRHPKNPNDPNA--AENRRIDIFIKSK 282
>gi|260428375|ref|ZP_05782354.1| peptidoglycan-binding domain 1 protein [Citreicella sp. SE45]
gi|260422867|gb|EEX16118.1| peptidoglycan-binding domain 1 protein [Citreicella sp. SE45]
Length = 817
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 54/150 (36%), Gaps = 11/150 (7%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ D + L + E+ Q + + + L+ +
Sbjct: 192 EGEDDAATAEPAAPLSRQEEIALSQSSPGRVTATLRPFRFVLE----NFAIDSARLKDEH 247
Query: 93 LPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+L + ++ + + + I H D G +N +S RA +++ L + V+
Sbjct: 248 RAVLAELRRLIAVAEPGALRVVIVGHADESGPELHNSGLSVRRARAVRTALGRASVAG-- 305
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ GF P+D D+ R N+R+EI
Sbjct: 306 ---IAGFGEAAPLDPADSVEARSRNRRVEI 332
>gi|158314079|ref|YP_001506587.1| OmpA/MotB domain-containing protein [Frankia sp. EAN1pec]
gi|158109484|gb|ABW11681.1| OmpA/MotB domain protein [Frankia sp. EAN1pec]
Length = 407
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 39/116 (33%), Gaps = 2/116 (1%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+R V + L L +A L + + HTDS G
Sbjct: 290 TRAALRAALDGTALTFPVGDTVLGASTRSGLDKVARALLP-GDLTVIVGGHTDSTGPRAL 348
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N +S +RA + + I GF PI N + GR N+R+++
Sbjct: 349 NQALSIDRAR-VAREYLVMRGVPAERIRAAGFGPDQPIADNASTSGRAANRRVDVT 403
>gi|45656521|ref|YP_000607.1| flagellar motor protein MotB [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599756|gb|AAS69244.1| sodium translocating Bacterial Flagellar Motor protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 275
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 59/186 (31%), Gaps = 16/186 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-PV 78
R ++ +S + K S A + F+ +++ + ++ + +
Sbjct: 66 SKGRLEEMGMNIESLPSQTTGKALSKSKQLATELFKPEVEAGKVKITEDERGLIISLVSA 125
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI------------GTLKNN 126
L L+ A+ L K + + ++ H D+ NN
Sbjct: 126 DYFNPGSAILTDSIKIALRK-ASSLIKDLNRFVRVEGHCDANAVNPGVAPGKEERAYINN 184
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQNNQRIEIQIFP 184
++ RA Y+I + F P+ T + N+RI+I I
Sbjct: 185 WDLAGARAINSTDYIINVEKLDPSWFQAVSFGAFRPLVVEYAGTPEAKAYNRRIDIVIMT 244
Query: 185 RGNIKK 190
+ K+
Sbjct: 245 EKSTKR 250
>gi|46201524|ref|ZP_00054848.2| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 114
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L K +L +A L + + + H D G+ + NL + + RA+ +K+Y
Sbjct: 11 FDSDRLDLNAKAKAILDGVAEELKRNSTLTAILAGHADDRGSREYNLALGERRAEAVKTY 70
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L G R + + + P DT+ TK R N+R+ +++
Sbjct: 71 LAVHGAPVERM-AAISYGKEQPRDTSGTKAARAANRRVVVRL 111
>gi|330719944|gb|EGG98406.1| General secretion pathway protein A [gamma proteobacterium
IMCC2047]
Length = 141
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
L + L L LI + + + HTDS G ++N+ +S++
Sbjct: 30 IERSTIFYASGRTKLAPEVLEQLDLIIRYVKADKRIKRVVVDGHTDSAGDKESNIRVSKQ 89
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+++ +Y ++ S++ I +R +YP NDT G+ N+R+ I++
Sbjct: 90 RANLVVAYF-KKAGISSKRIVMRWHGDRYPTAANDTDEGQARNRRVTIRL 138
>gi|262277489|ref|ZP_06055282.1| OmpA family protein [alpha proteobacterium HIMB114]
gi|262224592|gb|EEY75051.1| OmpA family protein [alpha proteobacterium HIMB114]
Length = 155
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 59/177 (33%), Gaps = 35/177 (19%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
I+ L + +S C +++ +
Sbjct: 6 IRNFALVAVLGFLVSACATGGKKRS--------------------------------AND 33
Query: 62 GIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + +P V F ++ L L A + + ++ H D
Sbjct: 34 WYTGTDTVKFLAAGVPDRVFFATNKSGLHTASKSTLNKQAAYIKS-SGISVVVEGHADER 92
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + NL + + RA+ ++ YL+ + S ++V + + P++ +++ N+R
Sbjct: 93 GTREYNLALGERRANAVRDYLMSQ-GVSGSNVTVISYGKERPVNPESSRLAWSQNRR 148
>gi|225159124|ref|ZP_03725430.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2]
gi|224802279|gb|EEG20545.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2]
Length = 199
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/191 (12%), Positives = 53/191 (27%), Gaps = 14/191 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKK-KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ + +GC + L G + D L +
Sbjct: 10 FIIAGSAVIFAAGCKKKPVRPDPQSTLIGQTPGGNDTHSSGLNTTPFGDLTPSPLPAGLV 69
Query: 64 VVS-----------RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ G+ I + + + ++ +Q LN P +
Sbjct: 70 SDTGSGLQLGTTDASHGNQIRDAVQSVYFAFDQSAVRQEERAKIQDAQNYLNAHPDQRVL 129
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
++ D GT + NL + RA+ ++ YL + I + N
Sbjct: 130 LEGRCDWRGTAEYNLGLGDRRANSVRQYLQDL-GIAANRIEILSKGDLE-AVENADAATA 187
Query: 173 QNNQRIEIQIF 183
++R++
Sbjct: 188 AKDRRVDFVFI 198
>gi|116253762|ref|YP_769600.1| hypothetical protein RL4023 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258410|emb|CAK09513.1| putative chemotaxis protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 343
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN----KFP---ST 109
++ + +GD + L + + +A L + P +
Sbjct: 205 EILSDRENIRIVGDRFVFQ-SEVLFPSGGADLNPEGQTEMAKLAAALLDLAKEIPPEINW 263
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD+ G ++N +S RA + +LI +GV ++R ++ GF PI
Sbjct: 264 VLRVDGHTDNVPLGGTGRYRDNWELSSARAISVVKFLIAQGVPADRLVAA-GFGEFQPIA 322
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
DT R N+RIE+++ +
Sbjct: 323 PGDTPDARSTNRRIELKLTEK 343
>gi|283853398|ref|ZP_06370644.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
gi|283571211|gb|EFC19225.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
Length = 301
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 57/164 (34%), Gaps = 15/164 (9%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEK 90
++ T K + + + + + + + + F + ++
Sbjct: 142 EAERTGPTKKSLEDIRKELAGKLD--ITSGAVEILPRENGVELNLRGAAFFDAASADIKS 199
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGV 146
LP+L+ IA L+ P + ++ HTD+ N +S RA + LI
Sbjct: 200 GGLPLLRDIAATLSGTP-YRVTVEGHTDNRPIESWLYPSNWELSSARASRVARLLIDG-G 257
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGR------QNNQRIEIQIFP 184
+ V G A P+ N GR N+R+ I + P
Sbjct: 258 VPAGHMRVEGLADTQPVAPNTDPAGRSIAENQARNRRVVILVSP 301
>gi|28898885|ref|NP_798490.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus RIMD
2210633]
gi|1170999|sp|P46233|MOTY_VIBPA RecName: Full=Sodium-type flagellar protein motY; Flags: Precursor
gi|497129|gb|AAA21574.1| MotY [Vibrio parahaemolyticus]
gi|28807104|dbj|BAC60374.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus RIMD
2210633]
gi|328474556|gb|EGF45361.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus 10329]
Length = 293
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 87 FLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L K L IA + ++ + ++TDS + +S+ RA+ +++Y G
Sbjct: 193 QLTKASKKRLAQIADYVRHNQDIDLVLVATYTDSTDGKSESQSLSERRAESLRTYFESLG 252
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +R I V+G+ + PI N T +G+ N+R+ I +
Sbjct: 253 LPEDR-IQVQGYGKRRPIADNGTPIGKDKNRRVVISL 288
>gi|332300857|ref|YP_004442778.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
gi|332177920|gb|AEE13610.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
Length = 665
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 44/136 (32%), Gaps = 28/136 (20%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I L + L + T+L + P + + SHTD G+ N +SQ RA
Sbjct: 530 QIHDIYYDFDRASLRPEGKKSLDYLITLLEQNPDVRLELSSHTDRKGSQAYNQKLSQRRA 589
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI-----------------------DTNDTKV- 170
+ YLI + + + RG+ + P T+
Sbjct: 590 QSVVDYLIAK-GIAADRLEARGYGKERPYVVTKGMAARFDWLPEGQELTAEWVDTLTEEQ 648
Query: 171 ---GRQNNQRIEIQIF 183
Q N+R E +
Sbjct: 649 QIVCDQLNRRTEFTVI 664
>gi|313203560|ref|YP_004042217.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312442876|gb|ADQ79232.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 778
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 11/150 (7%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
S+D + + + + + ++ + P L + T+L
Sbjct: 600 SIDVTSGAMKDLISNKQELEVND----RWKLNNIHYNFNKWDIRPDATPTLDSLITLLKI 655
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+P I + S+TDS GT + N +SQ+RA+ + +YL++ G+ NR I+V G + ++
Sbjct: 656 YP-IKIELGSYTDSRGTSQYNDTLSQKRAESVVAYLVKHGIDRNRLIAV-GHGERNILNR 713
Query: 166 N-----DTKVGRQNNQRIEIQIFPRGNIKK 190
++ Q N+R E+++ GN+ K
Sbjct: 714 CIDGVSCSENEHQVNRRTEVKVISNGNLLK 743
>gi|145588969|ref|YP_001155566.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145047375|gb|ABP34002.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 163
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 56/184 (30%), Gaps = 27/184 (14%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K ++ + ++ C + + + +
Sbjct: 1 MKFFKICILAIFAVLVAACSTGVKLDDNNRVATVSAGSPLT------------------- 41
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHT 117
++ K+ ++ A+ L F I IQ +T
Sbjct: 42 ---YDPISDPRSSVYGKRSIYFEFDSYSIDPKYASIISAHASYLKSFERQKASIIIQGNT 98
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + NL + Q R++ +K L+ S + F + P + T+ + N+R
Sbjct: 99 DDRGTAEYNLALGQRRSEAVKKALLAL-GVSESQVEAVSFGKEKPENPAQTEAAFKENRR 157
Query: 178 IEIQ 181
+I
Sbjct: 158 ADIV 161
>gi|259090537|gb|ACV91891.1| OprL [Pseudomonas fluorescens]
gi|259090541|gb|ACV91893.1| OprL [Pseudomonas fluorescens]
Length = 156
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 45/157 (28%), Gaps = 21/157 (13%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + N N E + I
Sbjct: 21 GCSSKGGDNAGEGAVDPNAGYGANTGAVDGSLSEEAALRA-------------------I 61
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + ++ +TD GT + N+ + + RA
Sbjct: 62 TTFYFEYDSSDLKPEAMRALDVHAKDLKAN-GARVVLEGNTDERGTREYNMALGERRAKA 120
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
++ YL+ + S + + + + P+ T
Sbjct: 121 VQRYLVLQ-GVSPAQLELVSYGKERPVATGHDXQSWA 156
>gi|154149070|ref|YP_001406274.1| Omp18 [Campylobacter hominis ATCC BAA-381]
gi|153805079|gb|ABS52086.1| Omp18 [Campylobacter hominis ATCC BAA-381]
Length = 154
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 61/185 (32%), Gaps = 37/185 (20%)
Query: 2 IKELGL--SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K L L ++ +SGC + E VN +L + Q ++
Sbjct: 1 MKHLVLLSAVVAALMVSGCSKKTPE--------------VNSNSADALATLASKIQSEVN 46
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHT 117
+ ++ + A + N+ S + I+ +
Sbjct: 47 ------------------TVYFDFDKFNIKTSEQSKISNNAALFNQAGAESLTVKIEGNC 88
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D GT + N + +RA K + + + +SV + + T+ TK N+R
Sbjct: 89 DEWGTDEYNYALGLKRATAAKD-ALVKQGVAENRLSVVSYGESNLVCTDKTKACDAQNRR 147
Query: 178 IEIQI 182
E ++
Sbjct: 148 DEFKV 152
>gi|114327745|ref|YP_744902.1| hypothetical protein GbCGDNIH1_1081 [Granulibacter bethesdensis
CGDNIH1]
gi|114315919|gb|ABI61979.1| chemotaxis motB protein [Granulibacter bethesdensis CGDNIH1]
Length = 350
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 14/151 (9%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL-- 103
+ + + L + +GD + L ++ ++ IA L
Sbjct: 203 YRSEFFGKLREVLAGRP-GIQVVGDRFVFQ-SDVLFPSGNADLTEQGRQQVKDIAAALIQ 260
Query: 104 --NKFP---STVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
KFP + ++ + H D G +N +S +RA + LI++ +S
Sbjct: 261 LSKKFPPNVNWLLRVDGHADRQKMVNGKFASNWELSAQRAINVARLLIEQ-GVPGNHVSA 319
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
FA P+ D++ N+RIE+++ R
Sbjct: 320 DAFADYQPVSQGDSEADLAKNRRIELRLTDR 350
>gi|325525950|gb|EGD03642.1| putative OmpA/MotB family outer membrane protein [Burkholderia sp.
TJI49]
Length = 405
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 59/184 (32%), Gaps = 12/184 (6%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + + + G AS + V F S E + ++ +
Sbjct: 226 VVVGITGALLLGAAGYASVDYWLVSRQ-----AQRMSPFDSLARDLEQRLRDEVAAGNVE 280
Query: 65 VSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIG- 121
+ R + FV + ++ + TV+ + + DS
Sbjct: 281 LIRDPGRHALTLRFVGMFVPGAVTVAPWGASVVASAGREIASIAEGTVVRVVGYADSAPA 340
Query: 122 ---TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+N +S+ RA+ + L+ + V G + N T+ GR N+R+
Sbjct: 341 GSARQVSNQALSEARAENVARILVAA-GIPAHGLRVEGRGDADALADNGTESGRARNRRV 399
Query: 179 EIQI 182
E+ +
Sbjct: 400 EVIV 403
>gi|255322336|ref|ZP_05363482.1| OmpA/MotB [Campylobacter showae RM3277]
gi|255300709|gb|EET79980.1| OmpA/MotB [Campylobacter showae RM3277]
Length = 256
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 66/195 (33%), Gaps = 14/195 (7%)
Query: 3 KELGLSMF----IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE--DEFQM 56
K+L ++ + + G ++ + + +E
Sbjct: 45 KKLEAAIGSLSGALGVLEGGAKPDVSAEQNQDDHATSNKERTGVKSNFEQTLRSINELLH 104
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFL-EKKFLPMLQLIATILNKFP-STVIAI 113
+ +P ++ F L L L+ IA ++ K P V +
Sbjct: 105 ASGSPEVTFEESESGFVIRLPANLLFAKDSAKLQNDDALLFLKRIAMVIAKLPPDVVANV 164
Query: 114 QSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
HTDS K+N +S RA + S LI + + ++ A P TN T+
Sbjct: 165 IGHTDSEQPASTEFKDNWQLSSARAISVVSELI-KDGVDPKKLTASAKAEFEPFVTNFTE 223
Query: 170 VGRQNNQRIEIQIFP 184
GR+ N+R+EI
Sbjct: 224 QGREKNRRVEIHFVS 238
>gi|126668189|ref|ZP_01739150.1| OmpA/MotB [Marinobacter sp. ELB17]
gi|126627338|gb|EAZ97974.1| OmpA/MotB [Marinobacter sp. ELB17]
Length = 465
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 10/172 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI--PVH 79
+ + + N + + ++ D + Q + +VSR+ D T
Sbjct: 278 QQARSQSATETINVLEARMAQEKAATDNLQSRLQSLSHEKESLVSRLEDGTTVIKLPESI 337
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-------LKNNLLISQE 132
V + K L L+A L FP +I+IQ H+DS N +S
Sbjct: 338 VFNSGSARIGKAGQHTLTLLADALKSFPDHLISIQGHSDSRSIAPALQSLYPTNWELSAS 397
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA L + G+ +R +V GFA P+ V R+ N+RIE+ ++P
Sbjct: 398 RAASAVRVLREAGIDPSRMQAV-GFADARPLVKEIDTVSRRKNRRIEVLLYP 448
>gi|46579053|ref|YP_009861.1| chemotaxis protein PomB [Desulfovibrio vulgaris str. Hildenborough]
gi|120603363|ref|YP_967763.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|46448466|gb|AAS95120.1| chemotaxis protein PomB [Desulfovibrio vulgaris str. Hildenborough]
gi|120563592|gb|ABM29336.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
gi|311232899|gb|ADP85753.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
Length = 257
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 62/171 (36%), Gaps = 7/171 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + +V + + D + + + K Q ++ I+ + G +
Sbjct: 84 AFSPTTESQVLITEKLDAAEQEQLEVARMLKELVNEQAEIAKNAIISAEEGGINLRVNSR 143
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERA 134
+ L +++L+ TIL K + ++ HT S + +S RA
Sbjct: 144 ALFEPGSARLLPDGEAVIRLVHTILLKHK-YDLIVEGHTGSREPFSSQFPTHWELSAARA 202
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ +++ S R + G+ P+ + G + N+R+E P+
Sbjct: 203 VTLVRHILSL-GVSPRRLKAVGYGDTRPLVPENDDTG-ELNRRVEFFFRPQ 251
>gi|304393260|ref|ZP_07375188.1| OmpA/MotB domain protein [Ahrensia sp. R2A130]
gi|303294267|gb|EFL88639.1| OmpA/MotB domain protein [Ahrensia sp. R2A130]
Length = 343
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 14/140 (10%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---TV 110
+ + +GD + L + L + +A L + P V
Sbjct: 206 ILGARDDIRVVGDRFVFQ-SEVLFPSGGATLNEAGLGEMAKLANALIELGEEIPDEIDWV 264
Query: 111 IAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+ + HTD+I G +N +S RA + YLI +GV + R ++ GF P++
Sbjct: 265 LRVDGHTDNIPLSGSGRYADNWELSSGRATSVVKYLITQGVPAERLVAA-GFGEFQPLED 323
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
DT+ R N+RIE+++ +
Sbjct: 324 VDTQEARDRNRRIELKLTEK 343
>gi|229496999|ref|ZP_04390704.1| immunogenic 75 kDa protein PG4 [Porphyromonas endodontalis ATCC
35406]
gi|229316101|gb|EEN82029.1| immunogenic 75 kDa protein PG4 [Porphyromonas endodontalis ATCC
35406]
Length = 691
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 49/163 (30%), Gaps = 28/163 (17%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + + I + +++ L + L IA IL P
Sbjct: 507 FESDVATEDAVYAIDFTLASSVVSEVFQDIFYAFDSADLLPESKVALDQIAKILQDNPEV 566
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP------- 162
V+ + SH D +G+ NL +S RA + ++ + +G+ P
Sbjct: 567 VVELSSHADRVGSDAYNLGLSDRRARAVVD-YLKGKGIPADQLQPKGYGKSRPRVISSAL 625
Query: 163 --------------------IDTNDTKVGRQNNQRIEIQIFPR 185
+ D K+ N+R E + R
Sbjct: 626 HVLYPQFPEGTILDEAFVTALSEEDKKIADALNRRTEFIVIDR 668
>gi|77460739|ref|YP_350246.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77384742|gb|ABA76255.1| putative exported flagellar protein [Pseudomonas fluorescens Pf0-1]
Length = 302
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ LQ++ + P+ I + H+D+ G N +S+ RA + +
Sbjct: 184 ELDAAAKAKLQVMLEYMKADPTVNHIELDGHSDNSGNRLTNRELSRRRALAVVDFFKAN- 242
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I+VR +YP+ N R N+R+ + +
Sbjct: 243 GIQESQITVRFHGERYPLVPNTNAANRAKNRRVNVHL 279
>gi|329915272|ref|ZP_08276241.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium
IMCC9480]
gi|327544948|gb|EGF30290.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium
IMCC9480]
Length = 212
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 13/153 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ E + L I + + I V F + L+ + +L +
Sbjct: 55 QAEEQRRMTLEKALAIPLATGRITL----NNGRIGISGQVLFGLNSDQLQPEGRQLLTTL 110
Query: 100 ATILNKF---PSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L + ++ + TD I G +N +S +RA + LI + +
Sbjct: 111 VKPLQAYLTTRDELLMVSGFTDDISIRGGRFADNWELSAQRALTVTRALIDE-GMPSAMV 169
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
F + P+ N R N+R+E+ P+
Sbjct: 170 FAAAFGAEQPVSPNTDDAARAQNRRVEMAPVPK 202
>gi|42528870|gb|AAS18468.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum]
Length = 319
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 198 SDVLVNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 257
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + + IS RG P+ N ++R+EI++
Sbjct: 258 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 313
>gi|292491797|ref|YP_003527236.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
gi|291580392|gb|ADE14849.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
Length = 202
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 74/197 (37%), Gaps = 20/197 (10%)
Query: 1 MIKELGL-----SMFIMTTISGCGLASREKKKVFL-HKSNDTDIVNKRFGSSLDKAEDE- 53
M K++ +F + ++ L ++V L K D + +K +
Sbjct: 1 MTKKMFFKLAFWGVFPLIVMAALSLRMAAAEEVKLFTKPPSADEMGALLFPEKEKVSPKP 60
Query: 54 --------FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN- 104
T V + +P+ ++ + + P L + +LN
Sbjct: 61 QFKTRSLVMTPAPSATPQPVEEKKKSVGIALPIQ-FALNSFEILDETRPYLDEVGRLLNM 119
Query: 105 -KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+F I I+ HTD+ G+ N +SQERA +K+YL+ + V G + P+
Sbjct: 120 EQFKEERIIIEGHTDAQGSENYNNWLSQERAKSVKNYLVSSFRVDPERLMVVGRGEREPL 179
Query: 164 DTNDTKVGRQNNQRIEI 180
+ G N+R+E+
Sbjct: 180 PDLNPNNG--LNRRVEL 194
>gi|288549451|ref|ZP_05967142.2| hypothetical protein ENTCAN_05522 [Enterobacter cancerogenus ATCC
35316]
gi|288319143|gb|EFC58081.1| outer membrane protein A [Enterobacter cancerogenus ATCC 35316]
Length = 358
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + TD IG+ N +S++RA
Sbjct: 231 SDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YL+ + IS RG P+ N ++R+EI++
Sbjct: 291 QSVVDYLVSK-GIPANKISPRGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 346
>gi|78484705|ref|YP_390630.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78362991|gb|ABB40956.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2]
Length = 230
Score = 67.4 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 58/177 (32%), Gaps = 31/177 (17%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTG-IVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLP 94
V K S LD A + Q+ D + +SR + I+ I L
Sbjct: 39 SQVQKWAESQLDTAYAQLTTQMADAEYVSLSRTANGISVNISHPEAFVKGGYNLSSALES 98
Query: 95 MLQLIATILNKFP------------------------STVIAIQSHTDSIGTL-----KN 125
L + L + +++ +TD +N
Sbjct: 99 ELTQLGKALQSLKIFHLERSDVPIHILRIADADSLSWRSEVSVAGYTDDDQIDPQSPLRN 158
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S RA + L Q V G+ P+ +N+T+ G+ N+R+++ I
Sbjct: 159 NWFLSTMRAQNVMKSLYQSSELKQSQFGVTGYGKYRPVASNETREGKAKNRRVQVMI 215
>gi|332827935|gb|EGK00657.1| hypothetical protein HMPREF9455_02931 [Dysgonomonas gadei ATCC
BAA-286]
Length = 661
Score = 67.4 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 47/140 (33%), Gaps = 32/140 (22%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + L + L + +LN P+ I + +HTD G+ + N +SQ R
Sbjct: 519 VVLENIFYDFDKATLRPESKEELDGLIDLLNLNPNVTIELSAHTDRKGSDEYNNRLSQRR 578
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV----------------------- 170
A+ + +YLI + ++ G P N TK
Sbjct: 579 AESVVNYLIT-HGIAKDRLTAVGKGKAQPK--NVTKAVVKKYDFLKEGEVLTEQFIQELP 635
Query: 171 ------GRQNNQRIEIQIFP 184
Q N+R E ++
Sbjct: 636 PEQQDMADQVNRRTEFRVLS 655
>gi|91786415|ref|YP_547367.1| hypothetical protein Bpro_0505 [Polaromonas sp. JS666]
gi|91695640|gb|ABE42469.1| OmpA/MotB [Polaromonas sp. JS666]
Length = 220
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 55/148 (37%), Gaps = 12/148 (8%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF---PS 108
+ L + I V F + L +L+ + L +
Sbjct: 66 ALEKALAIPLATGRVTLNNGRIGISGSVLFPLNSDQLRPDGRLLLKSLVPPLQVYLGERD 125
Query: 109 TVIAIQSHTDSIGTLKNNLLI------SQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
++ + TD + N S +RA + LI+ G+ S+R + F + P
Sbjct: 126 ELLMVSGFTDDKPIQEGNQRFADNLALSAQRALTVTRALIEEGMPSSRAFAAA-FGAEQP 184
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR-GNIK 189
+ +N + GR N+R+E+ P+ N+K
Sbjct: 185 VASNTDEKGRALNRRVEMAPVPKSANVK 212
>gi|152968039|ref|YP_001363823.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
gi|151362556|gb|ABS05559.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
Length = 180
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 59/185 (31%), Gaps = 16/185 (8%)
Query: 5 LGLSMFIMTTISGCGL-ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L L++ + ++ A + V V LD + +
Sbjct: 3 LPLALAGILLLTATPSPAPSVQPWVGDPADGPAGRVLAVAPRVLDV------GPRVEDVV 56
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
G+ IT V +F L L I + + T I ++ HTD IG
Sbjct: 57 QPVPEGESITVGADVLFAF-GSADLPASAAGQLAGIGARIGRGHPTAIRVEGHTDGIGDD 115
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG------RQNNQR 177
N +S+ RA + + L + GF P+ T G R N+R
Sbjct: 116 AANQSLSERRAAAVAAALSAAAAGVP--VQQEGFGETRPLRPETTASGEDDPAARAANRR 173
Query: 178 IEIQI 182
+ + +
Sbjct: 174 VTVVL 178
>gi|113461178|ref|YP_719247.1| hemagglutinin antigen [Haemophilus somnus 129PT]
gi|112823221|gb|ABI25310.1| hemagglutinin antigen [Haemophilus somnus 129PT]
Length = 355
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 56/132 (42%), Gaps = 10/132 (7%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
++ + + + ++ L+ + L + + + + +++ +TD
Sbjct: 221 QKPVMAPEVVNKVFSLNSDVNFAFAKDTLKPEAQQTLDGVYGEIAQLKTAQVSVAGYTDR 280
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR----- 172
IG+ +NL +SQ RAD + +YL+ + + IS G+ P+ D GR
Sbjct: 281 IGSDASNLKLSQRRADTVANYLVSK-GVAQDAISAVGYGEANPVTGAKCDAVKGRKALIA 339
Query: 173 --QNNQRIEIQI 182
++R+EI +
Sbjct: 340 CLAEDRRVEISV 351
>gi|303237216|ref|ZP_07323786.1| OmpA family protein [Prevotella disiens FB035-09AN]
gi|302482603|gb|EFL45628.1| OmpA family protein [Prevotella disiens FB035-09AN]
Length = 704
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 71/180 (39%), Gaps = 36/180 (20%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ ++ + E + ++ + + I + L + L + +LN
Sbjct: 504 NHKEELKVEPVKETKEYTLQFPLASIRVPVMIDNIFYDFDKATLRPESEAALDNLVKLLN 563
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP-- 162
+ P+ I + +HTD +G + N ++Q RAD + +YLI++GVS++R +S G+ P
Sbjct: 564 ENPNVTIELSAHTDYLGRAEYNKNLAQRRADAVVAYLIKKGVSADR-LSPVGYGEGKPKT 622
Query: 163 ----IDT---------------------NDTKVGRQNNQRIEIQIF--------PRGNIK 189
+ + ++ Q N+R E + +GN+K
Sbjct: 623 IRKKVAEKYPWLKEGQVLTEEFIKSLPKDKQEIANQMNRRTEFVVLRTTYGMFDEKGNLK 682
>gi|282891235|ref|ZP_06299738.1| hypothetical protein pah_c048o071 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498928|gb|EFB41244.1| hypothetical protein pah_c048o071 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 238
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Query: 76 IPVHVSFVSEVFLE-KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ ++ L L+ +A L K + I+ H D G NL + R+
Sbjct: 129 FESVRFPYNSNLIKGEENLLALRKVANYLKKHDRVYVFIEGHCDERGAEAYNLALGSRRS 188
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ ++ LI+ GV+ ++ + + P+ + + N+R E +I+ R
Sbjct: 189 NAVREILIKEGVNPENLFTIS-YGKERPLFLDHNEESWGQNRRAEFKIYQR 238
>gi|255067169|ref|ZP_05319024.1| OmpA family protein [Neisseria sicca ATCC 29256]
gi|255048537|gb|EET44001.1| OmpA family protein [Neisseria sicca ATCC 29256]
Length = 253
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 80/222 (36%), Gaps = 36/222 (16%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF------GSSLDK---- 49
M K+L L ++F+ SG +AS K S+ + V + S DK
Sbjct: 1 MTKQLKLSALFVALVASGTAMASEAHTKHGYTVSSQSQEVVRNNYGECWKNSYFDKETQG 60
Query: 50 -AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
E + + + + ++ F + L + L +A L+
Sbjct: 61 RVECGDREAVAAVQQAPEYVDETVSLSAKTLFGF-DKDILRPEAQENLNSLAQRLSNENV 119
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ I+ HTD +G+ + N +S+ RA+V+ +YL+ R + +S G T
Sbjct: 120 QTVRIEGHTDFMGSEEYNQNLSERRANVVANYLVGR-GVPSSKVSATGLGESQAQMTATC 178
Query: 169 KVGRQN--------------------NQRIEIQIFPRGNIKK 190
+ ++R++++I R + K
Sbjct: 179 EAEVAKLGKKVSKAKKRAALIACIEPDRRVDVKI--RSTVTK 218
>gi|329850857|ref|ZP_08265702.1| ompA family protein [Asticcacaulis biprosthecum C19]
gi|328841172|gb|EGF90743.1| ompA family protein [Asticcacaulis biprosthecum C19]
Length = 263
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 63/165 (38%), Gaps = 5/165 (3%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI-GDMITCYIPVH 79
A+ + L ++ +D I V+R D I+ +
Sbjct: 96 AAANPSALKLPTEVIKGEKATTIVATNSNLPAVAGDNARDAAIEVARSCDDRISAAMGKR 155
Query: 80 VSFV--SEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADV 136
L P+L ++ ++ P + I +TD+ G K N LIS RA
Sbjct: 156 RLEYRFGTYELIGDSEPLLDELSKVVADCPADVKLIIAGYTDATGDAKANQLISLARAQT 215
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L++RGV + R I V+G P+ N T GR N+RI I+
Sbjct: 216 AADGLVKRGVDAGR-IQVQGMGGAAPVADNATPEGRAANRRIVIR 259
>gi|28869933|ref|NP_792552.1| OmpA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|28853178|gb|AAO56247.1| OmpA family protein [Pseudomonas syringae pv. tomato str. DC3000]
Length = 451
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 51/154 (33%), Gaps = 5/154 (3%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+S + + G + + L+
Sbjct: 300 TQSAKGQAIVAQSGFVSQTVQALKVPPTAQMPADYQALARKAERLSVNFRFAQGSARLDN 359
Query: 91 KFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
K L+ +A L + + + D+ L+S+ RA ++ LI+ GV+
Sbjct: 360 KAQQDLKRVAEYLKASGKLNQQVTLVGFGDAKSDPARAALLSRLRAMAVRRELIKSGVTF 419
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G + P+ TND GR N+R+E+ +
Sbjct: 420 RDIL---GLGDEMPVATNDIDDGRIKNRRVEVWV 450
>gi|171060501|ref|YP_001792850.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6]
gi|170777946|gb|ACB36085.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6]
Length = 182
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 44/114 (38%), Gaps = 1/114 (0%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ E + + P+++L L P+ + I+ + D G+ + NL
Sbjct: 68 DPNHAISKQRSVFFDFDEFVIRTQDRPVVELHGKYLASTPALKVVIEGNADERGSREYNL 127
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +RA + + +++ + + + P+D + N+R +++
Sbjct: 128 ALGNKRAQAVVQSF-KLLGAADGQMEAISYGEERPMDAGHDEAAWAKNRRADVR 180
>gi|153011513|ref|YP_001372727.1| flagellar motor protein MotB [Ochrobactrum anthropi ATCC 49188]
gi|151563401|gb|ABS16898.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 371
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 10/169 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
E K + + K K E + + V + + + +
Sbjct: 202 KPEETAKPAETQEQLIADLKKAAEGEAAKEGAEAKKAEPMPDVTVVPVDGGVMIQLTDKI 261
Query: 81 ----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQER 133
+ + + + ML+ IA ++++ P + I HTD+ +N +S R
Sbjct: 262 DYGMFTIGSAKPDARVVQMLERIAQVISRQPG-EVIISGHTDARPFKSATYDNWRLSSAR 320
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A + L++ G+ R + V G+A + P N + N+RI+I +
Sbjct: 321 AQMAYYMLVRGGLDEKRVLRVEGYADRQPK--NASDPNAAENRRIDIFL 367
>gi|307822249|ref|ZP_07652481.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307736815|gb|EFO07660.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 100
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ P + I+ HTD++G+ + +S RA + + S+ I RG+A YP+
Sbjct: 14 KRQPD-KVLIEGHTDNVGSNSTHQGLSDRRAYAVW-TALNDMGISSDRIRTRGYADAYPV 71
Query: 164 DTNDTKVGRQNNQRIEIQI 182
NDT GRQ N+R+EI +
Sbjct: 72 AGNDTTAGRQLNRRVEIIL 90
>gi|322418514|ref|YP_004197737.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320124901|gb|ADW12461.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 450
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
S + + L A ++ + I+ HTDS+G ++NL +SQ+RA +K+
Sbjct: 344 FLFSSPAVRPIYQAQLAAFAALMKANEESSALIEGHTDSVGDRQSNLNLSQQRAQNVKNE 403
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L+ + + ++++G+ + P +N T VGRQ N+R + +
Sbjct: 404 LL-KHGVAPAKVAIKGYGFSKPRASNKTNVGRQKNRRAVVTLT 445
>gi|307568444|pdb|3OON|A Chain A, The Structure Of An Outer Membrance Protein From Borrelia
Burgdorferi B31
Length = 123
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ I V + I + S L+K++ + LIA +L KF I I+ HT+
Sbjct: 1 NAAIEVEKNNKGINLSFDIEFYPNSFQILQKEYKKI-DLIAKLLEKFKKNNILIEGHTEQ 59
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G + +S++RA I +YLI+ V I +G+ + P + + + N+R+E
Sbjct: 60 FGLEEEXHELSEKRARAIGNYLIKXKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVE 118
Query: 180 IQIFP 184
I I
Sbjct: 119 ITILN 123
>gi|209809438|ref|YP_002264976.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
gi|208011000|emb|CAQ81413.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
Length = 307
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/176 (22%), Positives = 67/176 (38%), Gaps = 24/176 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L L F ++ GC + K+ +DK ++ Q L
Sbjct: 6 MKSLLLG-FGFFSLFGCSTDTYVSKEN------------------IDKYDERVQKFLIAE 46
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+V R M + L++ L + +F IAI HTD G
Sbjct: 47 CLVPQREIQMAV----AEHFEFDKSELKETDYASLNQFVNSIKRFKG-RIAIVGHTDYQG 101
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
++ N +S++RA+ IK+YL ++ V SN V+ + K P + N+R
Sbjct: 102 SVSYNEELSRQRAESIKAYLSEKLVVSNYEWEVKYYGEKRPFIKGRSLEANAANRR 157
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 51/141 (36%), Gaps = 4/141 (2%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E +L + + + H +F + L+ L +A L
Sbjct: 162 FEQTIDKELNPACLPPEPK-RKVYVTMASHFAF-DKDELQNTDKVELDELALKLTGLTG- 218
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I I HTD G+ N +++ER+ +++YL + S ++ F PI +
Sbjct: 219 RILIAGHTDYQGSQSYNEQLAKERSMAVQNYLKTKVDPSQFIWEIKSFGEDSPIIEERSL 278
Query: 170 VGRQNNQRIEIQIFPRGNIKK 190
N+R +F G + K
Sbjct: 279 KANAANRRA-FVVFKEGPLPK 298
>gi|145298369|ref|YP_001141210.1| flagellar motor protein MotB [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851141|gb|ABO89462.1| Flagellar motor protein MotB [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 305
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 68/168 (40%), Gaps = 7/168 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A ++ + + + ++ ++ + ++ + +T +
Sbjct: 90 SARQDSPSIAPISGVPIKQDGTTLATIDTQLQENMGSLVEAGVVKLTLDDNWLTVELSSG 149
Query: 80 VSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERA 134
+ F F+ P+L +++IL + + ++ +TD+ ++N +S RA
Sbjct: 150 LLFGSGSAFMSTNAEPVLNTLSSILKPVDNY-VRVRGYTDNQQINNEIFRSNWTLSAARA 208
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + LI + + + ++ + P ND++ GR N+++ + I
Sbjct: 209 EAVLTALIAK-GVAPQRLAYEAYGEFSPFAGNDSEQGRLQNRKVVVAI 255
>gi|114799403|ref|YP_759662.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
gi|114739577|gb|ABI77702.1| ompA family protein [Hyphomonas neptunium ATCC 15444]
Length = 282
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 3/129 (2%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHV--SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
L + V + LP++ + I + I I
Sbjct: 152 ANLTGQLTTIESCQAAFDVTSKDRVIQFGAGNANISPVSLPLIDALGGIAALCRAFEIEI 211
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+HTD+ G N +SQERAD I++YL+ + + ++ G+ PIDT T
Sbjct: 212 GAHTDTRGADDYNQRVSQERADAIRAYLLGKE-LAEETLTAVGYGETQPIDTGSTAEAHA 270
Query: 174 NNQRIEIQI 182
N+R +
Sbjct: 271 RNRRTVFTV 279
>gi|71909209|ref|YP_286796.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71848830|gb|AAZ48326.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 193
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
L L + + K T I + HTD++G+ ++N +++ RA +++
Sbjct: 91 YFLEGTSELTADSKKELDGVFDEIKKRKVTDIVVIGHTDTVGSQESNDRLAEARAKAMQA 150
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ I V G + P+ +V N+R+EIQ+
Sbjct: 151 E-LEHLGVDAGSIKVSGRGEREPLVKTADEVAEPLNRRVEIQV 192
>gi|92114381|ref|YP_574309.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
gi|91797471|gb|ABE59610.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
Length = 830
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 11/123 (8%)
Query: 70 DMITCYIPVHVSFV--SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNN 126
+ I +F L++ L +A L I I H D IG N
Sbjct: 705 ETIVLESDTLFAFGRGDYAGLQQAGQQELDKLAERLLNTQDLGQILITGHADPIGNEAAN 764
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIE 179
+S +RA ++ YLI + I +G + P+ T D R N+R+E
Sbjct: 765 QQLSLQRAMTVRQYLIGK-GVPAGLIEAKGAGSERPLVTCDDDQPRAQLIECLAPNRRVE 823
Query: 180 IQI 182
I++
Sbjct: 824 IEV 826
>gi|107024169|ref|YP_622496.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116688504|ref|YP_834127.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105894358|gb|ABF77523.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116646593|gb|ABK07234.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
Length = 85
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A L K + + I HTD+ G +N+ +SQ RAD +K YLI + + ++ G
Sbjct: 1 MAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKS-IPPQQMTTTGVG 59
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
PI NDT GR N+RIE ++
Sbjct: 60 PDQPIAPNDTADGRARNRRIEFRV 83
>gi|322380701|ref|ZP_08054840.1| flagellar motor protein MotB [Helicobacter suis HS5]
gi|321146869|gb|EFX41630.1| flagellar motor protein MotB [Helicobacter suis HS5]
Length = 258
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 34/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKV-----------------------FLHKSNDTDIVNKR 42
LS+ + I+ ++ K KV D
Sbjct: 25 FLSLLLALFIALYAISVVNKSKVKALKKEFLKIFDYAPRPDSMQPVITIPPAPGDTQTSM 84
Query: 43 FGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIPVHVSFVSEVF--LEKKFLPML 96
S E+ + Q+ G ++ +I + +P + F + + +
Sbjct: 85 ETESSKANENSNRSQVSITKIGQGAILEQIAQGVVLKLPSSLLFENSYDDTINATMREYI 144
Query: 97 QLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR----GVSSNRF 151
IA I++ P I ++ TD+ N+ ++Y + + +
Sbjct: 145 HRIAKIIHALPDQIRIDVRGFTDNTPLPSNSRFKDHYALAASRAYKVMKVLLSDGIDPQK 204
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI N++ R +N R+EI
Sbjct: 205 LSFTSYGKNDPIAPNNSLEERLHNNRVEI 233
>gi|310814990|ref|YP_003962954.1| OmpA domain protein [Ketogulonicigenium vulgare Y25]
gi|308753725|gb|ADO41654.1| OmpA domain protein [Ketogulonicigenium vulgare Y25]
Length = 299
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 46/133 (34%), Gaps = 3/133 (2%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
L + + G + I L +A L P+ +
Sbjct: 167 APIAEALPSWAMTLEVEGHAV---IDGLAFETGSAAPLPGADVALGALADWLRADPARRV 223
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I HTD+ G+L N+ ISQ RA+ + L + G Y P ND + G
Sbjct: 224 LIVGHTDASGSLAANMTISQARAEAVAQRLRSEFAVPAAQLQAAGAGYMAPRAPNDDEAG 283
Query: 172 RQNNQRIEIQIFP 184
R N+R+E P
Sbjct: 284 RALNRRVEAVRLP 296
>gi|62317962|ref|YP_223815.1| flagellar motor protein MotB [Brucella abortus bv. 1 str. 9-941]
gi|83269939|ref|YP_419230.1| flagellar motor protein MotB [Brucella melitensis biovar Abortus
2308]
gi|189023213|ref|YP_001932954.1| flagellar motor protein MotB [Brucella abortus S19]
gi|237817509|ref|ZP_04596499.1| Protein mbhA [Brucella abortus str. 2308 A]
gi|254691605|ref|ZP_05154859.1| flagellar motor protein MotB [Brucella abortus bv. 6 str. 870]
gi|254698194|ref|ZP_05160022.1| flagellar motor protein MotB [Brucella abortus bv. 2 str. 86/8/59]
gi|254731639|ref|ZP_05190217.1| flagellar motor protein MotB [Brucella abortus bv. 4 str. 292]
gi|256256793|ref|ZP_05462329.1| flagellar motor protein MotB [Brucella abortus bv. 9 str. C68]
gi|260544147|ref|ZP_05819968.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038]
gi|260757237|ref|ZP_05869585.1| flagellar motor protein MotB [Brucella abortus bv. 6 str. 870]
gi|260759398|ref|ZP_05871746.1| flagellar motor protein MotB [Brucella abortus bv. 4 str. 292]
gi|260762641|ref|ZP_05874973.1| flagellar motor protein MotB [Brucella abortus bv. 2 str. 86/8/59]
gi|260883041|ref|ZP_05894655.1| flagellar motor protein MotB [Brucella abortus bv. 9 str. C68]
gi|297250146|ref|ZP_06933847.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196]
gi|62198155|gb|AAX76454.1| MotB, chemotaxis protein [Brucella abortus bv. 1 str. 9-941]
gi|82940213|emb|CAJ13269.1| OmpA/MotB domain [Brucella melitensis biovar Abortus 2308]
gi|189021787|gb|ACD74508.1| OmpA/MotB domain protein [Brucella abortus S19]
gi|237787264|gb|EEP61482.1| Protein mbhA [Brucella abortus str. 2308 A]
gi|260097418|gb|EEW81292.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038]
gi|260669716|gb|EEX56656.1| flagellar motor protein MotB [Brucella abortus bv. 4 str. 292]
gi|260673062|gb|EEX59883.1| flagellar motor protein MotB [Brucella abortus bv. 2 str. 86/8/59]
gi|260677345|gb|EEX64166.1| flagellar motor protein MotB [Brucella abortus bv. 6 str. 870]
gi|260872569|gb|EEX79638.1| flagellar motor protein MotB [Brucella abortus bv. 9 str. C68]
gi|297174015|gb|EFH33379.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196]
Length = 366
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 65/170 (38%), Gaps = 9/170 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD---MITCYIPV 78
+ KK + D+ G A + + VV G +T +
Sbjct: 199 QAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVVPVEGGVMSQLTDKVDY 258
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI---SQERAD 135
+ + + + + ML+ IA ++ + P + I HTD+ S RA
Sbjct: 259 GMFTIGSAKPDARVVQMLERIAQVIARQPG-EVIISGHTDARPFKSATYDNRRLSSARAQ 317
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L++ G+ R + V G+A ++P + ND N+RI+I I +
Sbjct: 318 MAYYMLVRGGLDEKRVLRVEGYADRHPKNPNDPNA--AENRRIDIFIKSK 365
>gi|331004882|ref|ZP_08328299.1| OmpA/MotB [gamma proteobacterium IMCC1989]
gi|330421336|gb|EGG95585.1| OmpA/MotB [gamma proteobacterium IMCC1989]
Length = 232
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 42/144 (29%), Gaps = 11/144 (7%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--- 106
E L + + D + + L++ +L + L +
Sbjct: 63 LEQALSDPLATGRVTLR---DGRIGISGNVLFANNSSTLQENGRELLNTLVAPLKIYLSE 119
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKS-----YLIQRGVSSNRFISVRGFAYKY 161
++ + TD NL S + + + + F +
Sbjct: 120 REQLLMVSGFTDDKPIQTGNLNFSDNWDLSAQRALTVTRALIEEGMPSSMVFAAAFGAQQ 179
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
P+ N + R N+R+E+ PR
Sbjct: 180 PVVPNTDRASRAKNRRVEMAPVPR 203
>gi|322379332|ref|ZP_08053708.1| flagellar motor protein MotB [Helicobacter suis HS1]
gi|321148245|gb|EFX42769.1| flagellar motor protein MotB [Helicobacter suis HS1]
Length = 258
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 34/209 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKV-----------------------FLHKSNDTDIVNKR 42
LS+ + I+ ++ K KV D
Sbjct: 25 FLSLLLALFIALYAISVVNKSKVKALKKEFLKIFDYAPRPDSMQPVITIPPAPGDTQTSM 84
Query: 43 FGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIPVHVSFVSEVF--LEKKFLPML 96
S E+ + Q+ G ++ +I + +P + F + + +
Sbjct: 85 ETESSKANENSNRSQVSITKIGQGAILEQIAQGVVLKLPSSLLFENSYDDTINATMREYI 144
Query: 97 QLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR----GVSSNRF 151
IA I++ P I ++ TD+ N+ ++Y + + +
Sbjct: 145 HRIAKIIHALPDQIRIDVRGFTDNTPLPSNSRFRDHYALAASRAYKVMKVLLSDGIDPQK 204
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S + PI N++ R +N R+EI
Sbjct: 205 LSFTSYGKNDPIAPNNSLEERLHNNRVEI 233
>gi|218507201|ref|ZP_03505079.1| putative outer membrane protein, OmpA family [Rhizobium etli Brasil
5]
Length = 208
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 7/133 (5%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIA 112
L + + + + L+ +A +L K PS
Sbjct: 69 SLDEVKYSARIRDKVRRIDLDTITFATGSAEIPMTQARTLRKVADAISQVLKKDPSETFL 128
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD++G+ ++NL++S +RA+ + + L ++ +G+ +Y
Sbjct: 129 IEGHTDAVGSDQSNLVLSDQRAESVANVLSDVYGIPPENMATQGYGERYLKVNTAGPE-- 186
Query: 173 QNNQRIEI-QIFP 184
Q N+R+ I ++ P
Sbjct: 187 QENRRVTIRRVTP 199
>gi|171912007|ref|ZP_02927477.1| OmpA/MotB domain protein [Verrucomicrobium spinosum DSM 4136]
Length = 1122
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F+ L+ + + + + L ++ H DSIGT +N+ +S+ RA + +
Sbjct: 1020 FFIGAPTLDDEEKRIDRKRRSDL--LIQYRFVLEGHADSIGTEASNMRLSERRARTV-AT 1076
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
I+ +S++ F P+D N + GR N+R+EI++ P
Sbjct: 1077 FIESMGVDRSKLSIKWFGESLPVDDNSVEAGRYKNRRVEIRLVPN 1121
>gi|309779564|ref|ZP_07674325.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
gi|308921805|gb|EFP67441.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
Length = 217
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 56/154 (36%), Gaps = 13/154 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E L + + I + ++ L+ + +++ +A
Sbjct: 56 EAEAQRRKTLEQALAGPLAAGRVTLVNGRIGIN---GNVLFAINSDQLQPEGRALMKSLA 112
Query: 101 TILNKF---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRF 151
L + ++ + +D +N +S +RA + LI G+ ++
Sbjct: 113 GPLAAYLTSREEILMVSGFSDDQQVRAGNRLFADNWELSAKRALTVTRALIDEGIPASSV 172
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ F + P+ +N VGR N+R+EI PR
Sbjct: 173 FAAA-FGSQQPVSSNADDVGRAKNRRVEIAPVPR 205
>gi|288959500|ref|YP_003449841.1| ompA/MotB domain protein [Azospirillum sp. B510]
gi|288911808|dbj|BAI73297.1| ompA/MotB domain protein [Azospirillum sp. B510]
Length = 416
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 57/141 (40%), Gaps = 7/141 (4%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
+ + +++ + V D + IP F ++ + +++ + L
Sbjct: 277 RITGQLAPEIRTGAVEVLAGEDGALVIRIPAAAMFATGGDAVKARHRAIVERVGQTLAAE 336
Query: 107 PSTVIAI---QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
P V+ + + + G L ++ RA+ ++ + +S G + P+
Sbjct: 337 PGGVLVVAHTDDQSPTTGRLPTGQALTDARAEAVRR--LLERSIPPARLSAEGHGDQEPV 394
Query: 164 DTNDTKVGRQNNQRIEIQIFP 184
NDT GR N+RI+I+++P
Sbjct: 395 ALNDTPAGRDANRRIDIRLYP 415
>gi|2499351|sp|Q99124|OMPA_ESCBL RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|146989|gb|AAA24235.1| outer membrane protein II [Escherichia blattae]
Length = 241
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + +TD IG+ N +SQ+RA
Sbjct: 123 SDVLFNFNKSTLKPEGQQALDQLYTQLSNLDPKDGAVVVLGYTDRIGSDAYNQRLSQQRA 182
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YL+ + I+ +G P+ N ++R+EI++
Sbjct: 183 QSVVDYLVSK-GIPAGKITAQGQGESNPVTGNTCDNVKKRAALIDCLAPDRRVEIEV 238
>gi|86138174|ref|ZP_01056749.1| OmpA/MotB domain protein [Roseobacter sp. MED193]
gi|85825201|gb|EAQ45401.1| OmpA/MotB domain protein [Roseobacter sp. MED193]
Length = 194
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 59/193 (30%), Gaps = 14/193 (7%)
Query: 1 MIKELGLSMFIMTTIS-------GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
M++ ++ F+ + + + + + S A
Sbjct: 1 MVRVSIIAAFMCSALLLPTSGLHAQASSEGQSVEEITKILQQQKTRGLVIAPSSAAAPAP 60
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPS 108
Q+T V + D + L P L + +
Sbjct: 61 QASDAQETATVATANTDYSPVDRQSQINLQISFDFDSATLRPDQQPKLVNMCASMQALQG 120
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
TV I HTDS G+ + N +S RA ++ +LI + G P ++ +
Sbjct: 121 TVFQIIGHTDSSGSARYNERLSLLRAQEVRRHLISNCGIDEDMLKAIGMGEAAPYNSANP 180
Query: 169 KVGRQNNQRIEIQ 181
+ N+R+E Q
Sbjct: 181 RAD--ENRRVEFQ 191
>gi|3915781|sp|P24017|OMPA_KLEPN RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
gi|3201545|emb|CAA04450.1| outer membrane protein A [Klebsiella pneumoniae]
Length = 344
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + +TD IG+ N +S++RA
Sbjct: 217 SDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRIGSEAYNQQLSEKRA 276
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YL+ + IS RG P+ N D R ++R+EI++
Sbjct: 277 QSVVDYLVAK-GIPAGKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEV 332
>gi|224371370|ref|YP_002605534.1| MotB4 [Desulfobacterium autotrophicum HRM2]
gi|223694087|gb|ACN17370.1| MotB4 [Desulfobacterium autotrophicum HRM2]
Length = 425
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 16/186 (8%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF---QMQLQDTGIVVSRIGD 70
+S ++EK + + +I R + L+K + EF ++ V GD
Sbjct: 242 ALSLANTQTQEKDEKIVDLGKQLNIALARKVNELEKYQSEFFGRLRKILGNNPAVQIEGD 301
Query: 71 MITCYIPVHVSFVSEVFLEKKFL-------PMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ L + L IA + + ++ I HTD +
Sbjct: 302 RFVLQA-GLLFESGSAVLGDQGRIHLTTLAETLMDIAKKIPDDINWILRIDGHTDRVPIN 360
Query: 124 K----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+N +S RA + + + + ++ GF+ +PID DT Q N+RIE
Sbjct: 361 NAAFPSNWELSAARAVAVVR-FLSQRGVPEKRMAAAGFSKYHPIDRADTPAAYQRNRRIE 419
Query: 180 IQIFPR 185
I++ +
Sbjct: 420 IKLTRQ 425
>gi|170717767|ref|YP_001784833.1| OmpA domain-containing protein [Haemophilus somnus 2336]
gi|168825896|gb|ACA31267.1| OmpA domain protein transmembrane region-containing protein
[Haemophilus somnus 2336]
Length = 342
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
++ + + + ++ L+ + L + + + + +++ +TD
Sbjct: 208 QKPVMAPEVVNKVFSLNSDVNFAFAKDTLKPEAQQTLDGVYGEIAQLKTAQVSVAGYTDR 267
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGR----- 172
IG+ +NL +SQ RAD + +YL+ + + IS G+ P+ D+ GR
Sbjct: 268 IGSDASNLKLSQRRADTVANYLVSK-GVAQDAISAVGYGEANPVTGMKCDSVKGRKALIA 326
Query: 173 --QNNQRIEIQI 182
++R+EI +
Sbjct: 327 CLAEDRRVEISV 338
>gi|315181670|gb|ADT88583.1| outer membrane protein, hypothetical [Vibrio furnissii NCTC 11218]
Length = 208
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 71/199 (35%), Gaps = 10/199 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVF-----LHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M L + ++S LA+ E +N D + + A D+
Sbjct: 1 MNIRTLLLAVMAVSLSRPLLANEEPNPDVYDYIQTPVANQMDDLLDDDNDGVINARDKCP 60
Query: 56 MQLQDTGIVVSRIGDMIT---CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ I G I + + + F+ ++ +A L FP I
Sbjct: 61 DTPAASQIDNEGCGTAIKSSHLQKLHILFANNSSTIPPVFMNQIRQMADFLKLFPEASIE 120
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+Q + +G +NL +S++R++ + + R + + I + G+ + +V
Sbjct: 121 LQGYASKVGKADHNLALSKQRSEAV-RLQLLRFGVTPKRIRIVGYGDTVLAVNGEDQVSH 179
Query: 173 QNNQRIEIQIFP-RGNIKK 190
N+R+ + +G I K
Sbjct: 180 AQNRRVTASVVGFKGEIVK 198
>gi|148979316|ref|ZP_01815448.1| hypothetical protein VSWAT3_05151 [Vibrionales bacterium SWAT-3]
gi|145961856|gb|EDK27148.1| hypothetical protein VSWAT3_05151 [Vibrionales bacterium SWAT-3]
Length = 322
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 59/183 (32%), Gaps = 24/183 (13%)
Query: 1 MIKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M +GL + ++GC + ++ N+ + LD ++ L
Sbjct: 1 MKITIGLVSGVISALLLAGCATDTYVSQE------------NRDKFAGLDVSKFLISECL 48
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ I H +F + L L + I I HTD
Sbjct: 49 APE--------REVHIAIAEHFAF-DKYKLRDLDKINLDTFVEEIRGLKG-RITIVGHTD 98
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+L+ N +SQ RA + YL +N V+ P+ T R N+R
Sbjct: 99 YKGSLEYNQRLSQRRAKSVADYLKAYLDPTNYDWEVKHLGETQPLLLGKTDKDRAENRRA 158
Query: 179 EIQ 181
I
Sbjct: 159 FIV 161
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 2/108 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ + L L A+ L+ I + HTD G++ N +++ RA+ + Y
Sbjct: 191 FDFDKSVLKPEDLTQLDDFASQLSGLQG-NIMVAGHTDQAGSVSYNEKLAERRAETVVKY 249
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
L + V+ F P ++ N+R +F +I
Sbjct: 250 LKTKLNPKQFIWEVKSFGKLQPAINERSEKADALNRRA-FIVFKESDI 296
>gi|119478304|ref|ZP_01618335.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [marine gamma proteobacterium HTCC2143]
gi|119448644|gb|EAW29889.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [marine gamma proteobacterium HTCC2143]
Length = 300
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
++ L + L + + S I HTDSIG NL +S++
Sbjct: 187 INRSRVHFITAKFELTRDAKTQLDDVVRYVKADSSVTGFYIDGHTDSIGRRLYNLELSKQ 246
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
RA+ + YL+ I+ R +YP+ N + R N+R+ +++ RG++
Sbjct: 247 RAEAVTKYLVSN-GVDEAMITTRYHGERYPVIDNSSAKNRYANRRVTLRL-ERGDL 300
>gi|37704634|gb|AAR01589.1| OprF [Pseudomonas sp. MFY79]
Length = 296
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P T ++ HTDS+G N +SQ RAD +
Sbjct: 211 DVKFDFDKSVVKPNSYADVKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSQRRADAV 270
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPID 164
K L++ G+ + R SV G+ P+
Sbjct: 271 KQVLVKDGIDAGRVSSV-GYGESRPVA 296
>gi|321472579|gb|EFX83548.1| hypothetical protein DAPPUDRAFT_239461 [Daphnia pulex]
Length = 193
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 44/141 (31%), Gaps = 1/141 (0%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
D+A Q + +G D +T L + +
Sbjct: 38 GAEWATCECGDSDEATTSGQGCMDVSGPTPGTAADFVTNVEDRVFYGFDRYDLAPESRAV 97
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L+ A L K+P + + D GT++ N + Q RAD + + +S
Sbjct: 98 LEKQAAWLLKYPEREAEVAGYCDVRGTVEYNDKLGQRRADAARD-YLTSLGVHAGRLSTI 156
Query: 156 GFAYKYPIDTNDTKVGRQNNQ 176
+ + + T+ N+
Sbjct: 157 SYGKRITLVPGHTEEIYAQNR 177
>gi|260901886|ref|ZP_05910281.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
gi|308108170|gb|EFO45710.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
Length = 1580
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 15/149 (10%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV---FLEKK---FLPMLQLIAT 101
DK E + +G + I + + + F L+ F + +A
Sbjct: 573 DKLEQALKDARDQSGNQIDAILVNSSRGAGIKIEFAFNSREKELKDHASIFKQLAASLAN 632
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+L P+ + I+ H +GT K N+ +S ERA+ K L++ + +S+ F
Sbjct: 633 VLEDEPNLRVEIEGHACQVGTEKANMQVSAERAEYAKKLLMKEFPVFDGRVSIAAFGESK 692
Query: 162 PI--------DTNDTKVGRQNNQRIEIQI 182
P+ + R N+R+ I+I
Sbjct: 693 PVYVPKQGEKVDRNNPNLR-QNRRVVIRI 720
>gi|170698906|ref|ZP_02889966.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170136159|gb|EDT04427.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 85
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A L+K + + I HTD+ G +++ +SQ RAD +K YLI + + ++ G
Sbjct: 1 MAAALSKLQNRTVDIIGHTDNSGNRTSHIALSQARADAVKGYLITKS-IPPQQMTTTGVG 59
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI 182
PI NDT GR N+RI+ ++
Sbjct: 60 PDQPIAPNDTADGRARNRRIDFRV 83
>gi|28898164|ref|NP_797769.1| hypothetical protein VP1390 [Vibrio parahaemolyticus RIMD 2210633]
gi|260366463|ref|ZP_05778902.1| OmpA family protein [Vibrio parahaemolyticus K5030]
gi|260878509|ref|ZP_05890864.1| OmpA family protein [Vibrio parahaemolyticus AN-5034]
gi|260897090|ref|ZP_05905586.1| OmpA family protein [Vibrio parahaemolyticus Peru-466]
gi|28806378|dbj|BAC59653.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308087682|gb|EFO37377.1| OmpA family protein [Vibrio parahaemolyticus Peru-466]
gi|308091128|gb|EFO40823.1| OmpA family protein [Vibrio parahaemolyticus AN-5034]
gi|308113073|gb|EFO50613.1| OmpA family protein [Vibrio parahaemolyticus K5030]
Length = 1580
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 15/149 (10%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV---FLEKK---FLPMLQLIAT 101
DK E + +G + I + + + F L+ F + +A
Sbjct: 573 DKLEQALKDARDQSGNQIDAILVNSSRGAGIKIEFAFNSREKELKDHASIFKQLAASLAN 632
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+L P+ + I+ H +GT K N+ +S ERA+ K L++ + +S+ F
Sbjct: 633 VLEDEPNLRVEIEGHACQVGTEKANMQVSAERAEYAKKLLMKEFPVFDGRVSIAAFGESK 692
Query: 162 PI--------DTNDTKVGRQNNQRIEIQI 182
P+ + R N+R+ I+I
Sbjct: 693 PVYVPKQGEKVDRNNPNLR-QNRRVVIRI 720
>gi|330502362|ref|YP_004379231.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328916648|gb|AEB57479.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 313
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ L +I + P+ I H D+ G N +S+
Sbjct: 176 IRQAQIGFPGGGIDLDPMAKAKLDIILDFVKADPTINSFQIDGHADNSGNRLTNRDLSRR 235
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA ++ YL+ I++R +YP+ N+ + R N+R +++
Sbjct: 236 RALAVQEYLVAG-GIPVEQITMRFHGERYPLVPNNNEANRAKNRRATLRL 284
>gi|257091687|ref|YP_003165328.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044211|gb|ACV33399.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 202
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/202 (14%), Positives = 64/202 (31%), Gaps = 21/202 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M L + ++ G A+ +++ D + + + + + +
Sbjct: 1 MKTNLYRVALVAAFVTLTGGATVLPAAAADDETSSLDELRRAMTEPSEAPKKKRTRAIVF 60
Query: 61 TGIVVSRIGDMITCYIPVHV-------------------SFVSEVFLEKKFLPMLQLIAT 101
G + + L IA
Sbjct: 61 DGDSAQAPASAAPAAAGGALDCAALPPDVRATAVQFPIQFRPGSANITPASGNTLIEIAK 120
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
IL+ P I ++ HTD+ G N+ +S++RA+ + ++ +G R + G
Sbjct: 121 ILSLTPDRCIIVEGHTDAEGNADRNMALSRDRANSVVKFISDKGAVERRRLVPVGKGSTD 180
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
P+ D + R N+R+ ++
Sbjct: 181 PLKDLDPRDSR--NRRVVFKVV 200
>gi|330982164|gb|EGH80267.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 447
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 57/157 (36%), Gaps = 8/157 (5%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ + ++ + + Q+ ++R + ++
Sbjct: 296 AQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERLSVNFR---FAQGSAR 352
Query: 88 LEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ K L+ +A L + + D+ + L+S+ RA ++ L+ +
Sbjct: 353 LDNKAQQDLKRVADYLKTSGKLDQHVTLVGFGDAKSDPERAALLSRLRAMAVRRELL-KS 411
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ R I G + P+ TN+ GR N+R+E+ +
Sbjct: 412 GVTFRDI--VGLGDEMPVATNEIDDGRIKNRRVEVWV 446
>gi|332285773|ref|YP_004417684.1| lipoprotein PlpD [Pusillimonas sp. T7-7]
gi|330429726|gb|AEC21060.1| lipoprotein PlpD [Pusillimonas sp. T7-7]
Length = 266
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADV 136
L L ++ +AT L + +A+ HTD IG N +SQ+RA+
Sbjct: 152 DVGFAFGSAVLTTAGLSTVRDVATQLKQLSKLEQVAVAGHTDRIGDAGANQRLSQQRAES 211
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT------NDTKVGRQNNQRIEIQI 182
+++ L+ + + + +G+ P ND N+R++I++
Sbjct: 212 VRNALVAQ-GIPSSAVRAQGYGESRPAVQCDQQDRNDLIACLAPNRRVDIEV 262
>gi|315179667|gb|ADT86581.1| OmpA family protein [Vibrio furnissii NCTC 11218]
Length = 344
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATIL-NKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ L L+ + + + +T + I HTD++G+ NL +S+ R
Sbjct: 216 RDTSLYFASGQQSLSGAQQHTLRDLISYVVRDKRATHLLIDGHTDNVGSRLANLSVSRSR 275
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A+ + + +++ + I +R +YP+ +N T+ GR N+R+ I++
Sbjct: 276 AEQVAA-VLETLGVAADKIQIRAHGSRYPVASNATESGRAQNRRVVIRLV 324
>gi|289673872|ref|ZP_06494762.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
Length = 447
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 57/157 (36%), Gaps = 8/157 (5%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ + ++ + + Q+ ++R + ++
Sbjct: 296 AQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERLSVNFR---FAQGSAR 352
Query: 88 LEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ K L+ +A L + + D+ + L+S+ RA ++ L+ +
Sbjct: 353 LDNKAQQDLKRVADYLKTSGKLDQHVTLVGFGDAKSDPERAALLSRLRAMAVRRELL-KS 411
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ R I G + P+ TN+ GR N+R+E+ +
Sbjct: 412 GVTFRDI--VGLGDEMPVATNEIDDGRIKNRRVEVWV 446
>gi|152969543|ref|YP_001334652.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238894012|ref|YP_002918746.1| outer membrane protein A [Klebsiella pneumoniae NTUH-K2044]
gi|7442975|pir||JC6558 outer membrane protein A precursor - Klebsiella pneumoniae
gi|150954392|gb|ABR76422.1| outer membrane protein 3a (II*;G;d) [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238546328|dbj|BAH62679.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 356
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + +TD IG+ N +S++RA
Sbjct: 229 SDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRIGSEAYNQQLSEKRA 288
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YL+ + IS RG P+ N D R ++R+EI++
Sbjct: 289 QSVVDYLVAK-GIPAGKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEV 344
>gi|240950110|ref|ZP_04754405.1| lipoprotein Plp4/outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Actinobacillus
minor NM305]
gi|240295411|gb|EER46180.1| lipoprotein Plp4/outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Actinobacillus
minor NM305]
Length = 164
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 62/188 (32%), Gaps = 34/188 (18%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K +L + + GC + ++LD +
Sbjct: 1 MKLVKLATVSALAALLVGCAQS-----------------------NNLDAQAPAVVPSVP 37
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
V+ T + + L + L IA + + + + + +TD
Sbjct: 38 VKEASVTAPAKEFTLS-GDFLFDFDKSVLSAQGKSTLNGIAKEIKEAGAKNVTVTGYTDR 96
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN----- 174
+G+ N +SQ RA K+YL +GVS+N I G + + G+
Sbjct: 97 LGSAAYNQKLSQARAATTKAYLQSQGVSAN--IKAVGRGAANQVKACKGETGQALKDCLK 154
Query: 175 -NQRIEIQ 181
N+R+ I
Sbjct: 155 PNRRVHII 162
>gi|86739073|ref|YP_479473.1| OmpA/MotB [Frankia sp. CcI3]
gi|86565935|gb|ABD09744.1| OmpA/MotB [Frankia sp. CcI3]
Length = 187
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 62/177 (35%), Gaps = 17/177 (9%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ + ++GC + + F T I L
Sbjct: 27 VVMTAALGLVAGCSSSGGDTA-SFTPAPRATRIAPAVAADPLPPLSKFITQP-------- 77
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
G +T ++ + L ++ + L I + + P IA+ ++D +G ++
Sbjct: 78 --DGSQVTTVSADYLFDSNSSELRREAVTALGQILPSIREHPG-HIAVIGYSDGLGRTED 134
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NL +SQ+RA ++S+L + + V G + R +R+EI +
Sbjct: 135 NLRLSQDRAKAVESWLATQ-GIPGSVLEVEGKGEE-GAQDGVADASR---RRVEIVL 186
>gi|300114849|ref|YP_003761424.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113]
gi|299540786|gb|ADJ29103.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113]
Length = 280
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFL-EKKFLP 94
+D + + + + +D+ Q ++ + I + I D I I SF S + ++F P
Sbjct: 112 SDAPIQDTEAEVAELQDKLQHEIDEGLITIETIKDRIIIRIQEKGSFPSGSAIFSREFKP 171
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNR 150
L I IL K + + HTD ++N +S RA + YL+ S
Sbjct: 172 ALDKIRAILKKIEG-KLIVAGHTDDRPIQTSRFRSNWELSTARAVSVVHYLLATHEISPG 230
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ G+A P+ N+ R N+RIEI + P
Sbjct: 231 RFVLEGYADTQPLAPNENAANRARNRRIEITVLP 264
>gi|270339898|ref|ZP_06203472.1| OmpA family protein [Prevotella bergensis DSM 17361]
gi|270333364|gb|EFA44150.1| OmpA family protein [Prevotella bergensis DSM 17361]
Length = 694
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 46/136 (33%), Gaps = 29/136 (21%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I + L L + T+LN+ P+ I + +H D G N +SQ RA+
Sbjct: 523 IDNIFYDFDKATLRDTSKVALDRLVTMLNENPNITIELSAHADYKGASTYNKRLSQRRAE 582
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTND---------------TKV---------- 170
+ +YLI + ++ G+ + P N ++
Sbjct: 583 SVVNYLIA-HGIAADRLTPMGYGKEKPKTVNRKVAEKYNWLKAGDVLSEEFIKAMKDEKK 641
Query: 171 ---GRQNNQRIEIQIF 183
Q N+R E +
Sbjct: 642 QEICNQLNRRTEFLVL 657
>gi|163781628|ref|ZP_02176628.1| predicted inner membrane protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159882848|gb|EDP76352.1| predicted inner membrane protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 224
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 8/141 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFP 107
K + Q L + D + + V F L K L +A +L K P
Sbjct: 78 KIKRRVQKVLPPWAFQIVITADFVKLRLFDKVFFEDGTYQLTPKAREALVEVANVLKKLP 137
Query: 108 STV-IAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
I ++ H S +++ +S RA + +L + +S G+
Sbjct: 138 ENSFIRVEGHVSSLVEVRGRVVRDKWELSVRRATEVVRFLQAQ-GVEPTKLSAAGYGDIK 196
Query: 162 PIDTNDTKVGRQNNQRIEIQI 182
P+ T + + N R+EI I
Sbjct: 197 PLYTWRQPILMERNNRVEIYI 217
>gi|71280451|ref|YP_270642.1| ompA family protein [Colwellia psychrerythraea 34H]
gi|71146191|gb|AAZ26664.1| ompA family protein [Colwellia psychrerythraea 34H]
Length = 278
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 57/152 (37%), Gaps = 8/152 (5%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQL----QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ + ++ + L + E +Q QL D + + +
Sbjct: 111 SNEQIQSQYQAKLQRLEASYQQQLVALETQQHDSGQLQADNLLMSLQ---FSTGSSDIAP 167
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+ + +A ILN P I + +TDSIG N +SQ R + + L+ +
Sbjct: 168 HYQEQVAALAQILNSSPEMKIDLSGYTDSIGEQSLNQTLSQARVESV-RTLLMAQGVEEQ 226
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I+ F + P+ N+ ++R+ +++
Sbjct: 227 QIATFAFGEESPVVANNESEVSFYDRRVVLKL 258
>gi|255263090|ref|ZP_05342432.1| OmpA domain protein [Thalassiobium sp. R2A62]
gi|255105425|gb|EET48099.1| OmpA domain protein [Thalassiobium sp. R2A62]
Length = 521
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 54/164 (32%), Gaps = 13/164 (7%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--------SFVSEV 86
+ +++ D + + G V + + V
Sbjct: 356 AGFVDQAGVPTAIKGQGDRLATAILNAGEEVPLTELQRMMRVLGKLERLSMTFRFEVGST 415
Query: 87 FLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L+ + +A L + +D+ G N +S RA+ ++ +
Sbjct: 416 RLDAQSRSNAARMARDLRAGVHRDQRLIFVGFSDARGPASENRKLSSARAEAVQRRVNVA 475
Query: 145 GV---SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
S+ + F P+ +DT+ GRQ N+R+E+ + PR
Sbjct: 476 LGETELSDFTLETEAFGEALPMACDDTEWGRQVNRRVEVWVGPR 519
>gi|148555193|ref|YP_001262775.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
gi|148500383|gb|ABQ68637.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
Length = 373
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + + +L A + + H D G+ + N+ +SQ RAD +K
Sbjct: 268 VFFDWDKSDITAEAASILDNAANAYATTGQARVQLAGHADKSGSDQYNVGLSQRRADSVK 327
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+YL + + I+ F P+ V N+R+EI
Sbjct: 328 AYLAGK-GVPDSAITTEAFGESRPLVETADGVREPQNRRVEIT 369
>gi|48249486|gb|AAT40989.1| hemagglutinin antigen [Avibacterium paragallinarum]
Length = 345
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + +L I + + S + + +TD IG+ NL +SQ RAD
Sbjct: 228 SDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRRADT 287
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQIFPRGN 187
+ +YL+ + + IS G+ P+ D GR +++R+EI + +GN
Sbjct: 288 VANYLVSK-GVAQEVISSTGYGEANPVTGAKCDAVKGRKALIACLADDRRVEISV--KGN 344
>gi|54309732|ref|YP_130752.1| putative sodium-type flagellar protein MotY [Photobacterium
profundum SS9]
gi|46914170|emb|CAG20950.1| Putative sodium-type flagellar protein MotY [Photobacterium
profundum SS9]
Length = 296
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
V + L K L I + ++ + +++DS G N +S+
Sbjct: 183 IAFTVLHYDMDNDELNKPSQRRLAQITDFVRYSDDIDLVLLATYSDSTGGTNVNQSLSER 242
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA ++ Y + I V + + PI NDT +GR N+R+ I +
Sbjct: 243 RAKKLEEYFMSL-GLPKNRIQVEAYGKRRPIADNDTPIGRNKNRRVVISL 291
>gi|170741408|ref|YP_001770063.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
gi|168195682|gb|ACA17629.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
Length = 441
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 17/181 (9%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-------DTGIVVSRIGDM 71
A + K D ++L + + E +Q + V R G+
Sbjct: 262 AEAKPAEVKPAAVAPVDAKAAEPGENAALAELKAEVLKAVQPLATGAPAPKVEVRRTGEG 321
Query: 72 ITCYIPVHVSFV----SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK--- 124
I ++F + K + L+ IA +L+ P I ++ HTD+
Sbjct: 322 TLISITDELNFSMFNVGSAEPQAKVVKALERIAKVLSSRPG-QIVLRGHTDARPFKSESY 380
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+N +S RA + LI+ GV+ R + + G A + P + +D N+RIEI +
Sbjct: 381 DNWRLSSARAQMAAYMLIRGGVAERRIVRIEGHADRQPRNPSDPMA--AENRRIEILLRE 438
Query: 185 R 185
+
Sbjct: 439 K 439
>gi|158523264|ref|YP_001531134.1| hypothetical protein Dole_3254 [Desulfococcus oleovorans Hxd3]
gi|158512090|gb|ABW69057.1| conserved repeat domain [Desulfococcus oleovorans Hxd3]
Length = 2118
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 7/113 (6%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI-------SQE 132
+ L + ++ + L I + HTD+ + I S
Sbjct: 915 LFASFGTQLTENDKEQVRALRQSLAGRRIKRIIVTGHTDNQPIRARSRHIFADNDALSLG 974
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA + +YL I G + P+ +N T+ GR N+R+ + +
Sbjct: 975 RAQSVATYLQTILNLPPERIEAEGKGDREPVASNATEAGRAENRRVAVAVVSE 1027
>gi|37498966|gb|AAQ86765.2| hemagglutinin antigen [Avibacterium paragallinarum]
gi|48249488|gb|AAT40990.1| hemagglutinin antigen [Avibacterium paragallinarum]
Length = 345
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + +L I + + S + + +TD IG+ NL +SQ RAD
Sbjct: 228 SDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRRADT 287
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQIFPRGN 187
+ +YL+ + + IS G+ P+ D GR +++R+EI + +GN
Sbjct: 288 VANYLVSK-GVAQEVISSTGYGEANPVTGAKCDAVKGRKALIACLADDRRVEISV--KGN 344
>gi|319955259|ref|YP_004166526.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319423919|gb|ADV51028.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 283
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 9/133 (6%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L D I +S ++ I + F + + +L +A ++N P ++ H
Sbjct: 136 LDDEDIQISVEKGVVFVSISDKLLFSSGSYNVTNRAKEVLGKVAKVVNNKPDFDFMVEGH 195
Query: 117 TDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD + +N +S +RA I L + ++ + P+ T D +
Sbjct: 196 TDDVPYNGGILLDNWDLSAKRATAIVRILQNDYNVDPKRMTAAARSSYVPVSTTD----K 251
Query: 173 QNNQRIEIQIFPR 185
N+R I + P+
Sbjct: 252 AKNRRTRIVVLPK 264
>gi|260767963|ref|ZP_05876897.1| putative sodium-type flagellar protein MotY precursor [Vibrio
furnissii CIP 102972]
gi|260615993|gb|EEX41178.1| putative sodium-type flagellar protein MotY precursor [Vibrio
furnissii CIP 102972]
Length = 227
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQER 133
+ L L+ + + + + T + I HTD++G+ NL +S+ R
Sbjct: 99 RDTSLYFASGQQSLSAAQQRTLRDLISYVARDKRVTHLLIDGHTDNVGSRLANLSVSRSR 158
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A+ + + +++ + I +R +YP+ +N T+ GR N+R+ I++
Sbjct: 159 AEQVAA-VLETLGVAADKIQIRAHGSRYPVASNATESGRAQNRRVVIRLV 207
>gi|257464737|ref|ZP_05629108.1| lipoprotein Plp4 [Actinobacillus minor 202]
gi|257450397|gb|EEV24440.1| lipoprotein Plp4 [Actinobacillus minor 202]
Length = 282
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L K ++ +A L + + + +TD +G++ NL +SQ RA+++
Sbjct: 142 DFLFDFDKDTLTTKGKEVVDNVAAQLKSSKAQQVKVAGYTDRLGSVNYNLDLSQRRANMV 201
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN------NQRIEI 180
K+ L+Q+GV++ I G+ + D + G+ N+R+E+
Sbjct: 202 KARLVQQGVTAQ--IEAVGYGKANQVKACDGESGQALRDCLRPNRRVEV 248
>gi|226227699|ref|YP_002761805.1| putative outer membrane protein [Gemmatimonas aurantiaca T-27]
gi|226090890|dbj|BAH39335.1| putative outer membrane protein [Gemmatimonas aurantiaca T-27]
Length = 233
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 71/194 (36%), Gaps = 25/194 (12%)
Query: 16 SGCGLA--------------SREKKKVFLHKSNDTDIVNKRFGS------SLDKAEDEFQ 55
S C S E+ + + + V GS L+ + Q
Sbjct: 29 SACATKGFVRRGLEEQRVALSTERTERTTADNALQNDVRGVRGSVDSLRTDLNALRTDLQ 88
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQ 114
+ G ++ + + +PVH F + + ++ L+ A + +P I ++
Sbjct: 89 TLRTEYGAKITALEGAVKFAMPVHFGF-DDAAVRQEDQAALEKFAQVAQSHYPGATITVE 147
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND--TKVGR 172
+D G+ NL +S+ERAD ++ +L+ + + G+ + + G
Sbjct: 148 GFSDPAGSAAYNLRLSRERADAVRDFLVTK-GMDGAALRTVGYGKARLVRPGAKGDESGA 206
Query: 173 QNNQRIEIQIFPRG 186
+ N+R+ I G
Sbjct: 207 ELNRRVTFVIESSG 220
>gi|320531947|ref|ZP_08032850.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
gi|320135840|gb|EFW27885.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
Length = 227
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/168 (14%), Positives = 60/168 (35%), Gaps = 9/168 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A+ + + + +++ + + D+ + S G + V
Sbjct: 60 ATPDPTPTLKPQESSGSGESRQVQPLDRRVVPVSRSSSSDSAVTYSSDGQTTVASLSGDV 119
Query: 81 SFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+F L + +L I N P + + HTDS+ +N +S++RA +
Sbjct: 120 TFDVDSSALTDRAKQVLDDIVKRWNGKPPATVTVVGHTDSVADDAHNQTLSEQRAKAVAD 179
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTND------TKVGRQNNQRIEIQ 181
YL + + + G P+ + + G+ N+ ++++
Sbjct: 180 YLTSK--VPSLNVQSSGKGESEPVASETNADGSVNEAGKAANRHVDVR 225
>gi|52425273|ref|YP_088410.1| OmpA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307325|gb|AAU37825.1| OmpA protein [Mannheimia succiniciproducens MBEL55E]
Length = 368
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 11/134 (8%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
Q V+ T + V+F + L+ + L I + + S +++ +
Sbjct: 232 QGVAAPVAEEVVSKTFTLNSDVTFAFGKATLKPEASASLDNIYGEIAQVQSPAVSVAGYA 291
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR--- 172
D IG NL +SQ RA+ + +YL+ + + I+ G+ P+ N GR
Sbjct: 292 DRIGKEAANLKLSQRRAETVANYLVSK-GVAQNAITATGYGEANPVTGNTCDAVKGRKAL 350
Query: 173 ----QNNQRIEIQI 182
++R+E+ +
Sbjct: 351 IACLAPDRRVEVSV 364
>gi|218130801|ref|ZP_03459605.1| hypothetical protein BACEGG_02395 [Bacteroides eggerthii DSM 20697]
gi|317474322|ref|ZP_07933598.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
gi|217987145|gb|EEC53476.1| hypothetical protein BACEGG_02395 [Bacteroides eggerthii DSM 20697]
gi|316909632|gb|EFV31310.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
Length = 225
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 77/222 (34%), Gaps = 40/222 (18%)
Query: 2 IKELGLSMFIMTTISGCGLASREKK---------------------------KVFLHKSN 34
+K + + CG + K +
Sbjct: 4 MKFTAFLLSGTILLGSCGTMNNTTKGGIIGGGSGAAAGAIIGGLFGKGKGAAIGAAVGAA 63
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSF-VSEVFLEK 90
G +DK + +++ + V + + + + F + L
Sbjct: 64 VGTGAGVAIGHKMDK-KAAEAAKIEGAQVEVVKDANNLDAVKVTFDSGILFAFNSSTLSN 122
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L+ +A IL + +T IAI HTD +GT + N+ +S+ RA +++YL GVS ++
Sbjct: 123 DAKASLRDLAKILKEDTTTDIAIIGHTDKVGTYEANMKVSKNRAYAVENYLQDCGVSPSQ 182
Query: 151 FISVRGFAYKYPIDTNDTKVGR--QNNQRIEIQIFPRGNIKK 190
F V G Y N+ N+R+ I ++ + K
Sbjct: 183 FKQVEGVGY------NEYDESLSASQNRRVVIFMYASEQMIK 218
>gi|146306425|ref|YP_001186890.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145574626|gb|ABP84158.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 315
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ L +I + PS I H D+ G N +S+
Sbjct: 176 IRQAQIGFPGGGIELDAMAKAKLDIILDFVKADPSINSFQIDGHADNSGNRLTNRDLSRR 235
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA ++ YL+ I+VR +YP+ N+ + R N+R +++
Sbjct: 236 RALAVQEYLVAG-GVPAEQITVRFHGERYPLVPNNNEANRAKNRRATLRL 284
>gi|89072281|ref|ZP_01158860.1| putative sodium-type flagellar protein MotY precursor
[Photobacterium sp. SKA34]
gi|89051813|gb|EAR57265.1| putative sodium-type flagellar protein MotY precursor
[Photobacterium sp. SKA34]
Length = 250
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + + +L +A+ L + + I HTD++G+ NL IS+ RAD + S
Sbjct: 137 FRLGQRVVSSSQNEILADLASYLKYDKNVKRVLIDGHTDNVGSNVTNLQISKVRADDVAS 196
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ-IFPRGNIKK 190
L + + + +R +YP+ N+T+ G+ N+R+ I+ I +K+
Sbjct: 197 ILREN-GVRSSLMEIRSHGSRYPVANNNTQDGKAKNRRVTIRAIRKEDAVKR 247
>gi|332092496|gb|EGI97569.1| outer membrane protein A [Shigella boydii 5216-82]
gi|332095872|gb|EGJ00879.1| outer membrane protein A [Shigella dysenteriae 155-74]
Length = 351
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 224 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 283
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 284 QSVVDYLISK-GIPADKISARGIGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 339
>gi|320179525|gb|EFW54477.1| Outer membrane protein A precursor [Shigella boydii ATCC 9905]
Length = 342
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 215 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 274
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YLI + IS RG P+ N ++R+EI++
Sbjct: 275 QSVVDYLISK-GIPADKISARGIGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV 330
>gi|288919975|ref|ZP_06414296.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
gi|288348628|gb|EFC82884.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
Length = 212
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 63/192 (32%), Gaps = 20/192 (10%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN------KRFGSSLDKAEDEFQMQLQ 59
+ + G G + T + LD A + L
Sbjct: 19 LAVCALACVLVGPGSPRALGATADPSAAGPTRSADVPDEHLTASVRGLDTAVSVLPIDLA 78
Query: 60 DTGIVV---SRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPST-VIAIQ 114
D + R D + I V F L + +A + P T + +
Sbjct: 79 DAVSPLHTEERRDDQVVVTISADVLFAFDSADLTDVARAEITKLAPRVR--PGTETVTVL 136
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DT 168
HTD +GT N+++SQ RAD + L + R +S G P+ N D
Sbjct: 137 GHTDKLGTPAYNVMLSQRRADAVAGVLRSLLPAGTR-VSATGRGGADPVTPNSHPDGSDD 195
Query: 169 KVGRQNNQRIEI 180
GR N+R++I
Sbjct: 196 PDGRALNRRVQI 207
>gi|156976199|ref|YP_001447105.1| hypothetical protein VIBHAR_04970 [Vibrio harveyi ATCC BAA-1116]
gi|156527793|gb|ABU72878.1| hypothetical protein VIBHAR_04970 [Vibrio harveyi ATCC BAA-1116]
Length = 350
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L + L + + ++ T I + HTD++G+ NL +S++RA+ +
Sbjct: 212 FQFGQKTLSRSQQSTLAALYSYISVDDRVTKILVDGHTDNVGSQLANLNVSRQRAEQVAE 271
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
LIQ+GV + I VR +YPI +N+T+ G+ N+R+ +++ R N +
Sbjct: 272 ALIQQGVDRS-LIEVRAHGSRYPIASNNTQAGQAKNRRVTLRLV-RDNER 319
>gi|330901158|gb|EGH32577.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 451
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 58/157 (36%), Gaps = 8/157 (5%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ + ++ + + Q+ ++R + ++
Sbjct: 300 AQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERLSVNFR---FAQGSAR 356
Query: 88 LEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ K L+ +A L + + + D+ + L+S+ RA ++ L+ +
Sbjct: 357 LDNKAQQDLKRVADYLKTSGKLNQHVTLVGFGDAKSDPERAALLSRLRAMAVRRELL-KS 415
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ R I G + P+ TN+ GR N+R+E+ +
Sbjct: 416 GVTFRDI--VGLGDEMPVATNEIDDGRIKNRRVEVWV 450
>gi|77164352|ref|YP_342877.1| flagellar motor protein MotB [Nitrosococcus oceani ATCC 19707]
gi|254433318|ref|ZP_05046826.1| OmpA family protein [Nitrosococcus oceani AFC27]
gi|76882666|gb|ABA57347.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|207089651|gb|EDZ66922.1| OmpA family protein [Nitrosococcus oceani AFC27]
Length = 280
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFL-EKKFLP 94
+D + + + + +D+ Q ++ + I + I D I I SF S + ++F P
Sbjct: 112 SDAPTQDTEAEVAELQDKLQHEIDEGLITIETIKDRIIIRIREKGSFPSGSAIFSQEFKP 171
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNR 150
L I IL K + + HTD++ ++N +S RA + YL+ S R
Sbjct: 172 ALDKIRAILKKIEG-KLIVAGHTDNMPIQTTRFRSNWELSTARAVSVVHYLLATHEISPR 230
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ G+A P+ N+ R N+RIEI + P
Sbjct: 231 RFVLEGYADTQPLAPNENAANRARNRRIEITVLP 264
>gi|332703401|ref|ZP_08423489.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332553550|gb|EGJ50594.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 249
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 7/120 (5%)
Query: 72 ITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-----TDSIGTLKN 125
IT +P V F +V L + + +L+ + +L K I I+ K+
Sbjct: 128 ITLRVPSDVMFAPGQVELTTQGVAVLRDLKDLLIKHADQRINIRGFTDDVRPSGNSRFKD 187
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N IS R+ + L+ ++ G A P+ N++ R N+RIEI + R
Sbjct: 188 NWEISAMRSVNVLRVLMSL-GMEPTRLTATGLADLEPLFPNNSTENRARNRRIEITLEKR 246
>gi|124516387|gb|EAY57895.1| putative outer membrane protein, OmpA/MotB family [Leptospirillum
rubarum]
Length = 179
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 54/176 (30%), Gaps = 19/176 (10%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + + GC + + ++ + +
Sbjct: 10 LSILFAGILVTGGCASTN-------------GAGAGTQSNTTESTPAPAPAPAPEASNAS 56
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
++ + + F + L + +L+ A ILN P+ + I H D GT
Sbjct: 57 STQSDIESSLSRDITYGF-DKSVLTSEDRRILKKDAAILNANPTVHVVIAGHADERGTDT 115
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK----YPIDTNDTKVGRQNNQ 176
N+++ Q+RA + I + + + Y + ++ + N+
Sbjct: 116 YNIVLGQKRAKAAM-MYLVNLGIKKNRIKIVSYGKRTIPGYDLCSDHNEQCWSKNR 170
>gi|330447679|ref|ZP_08311327.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328491870|dbj|GAA05824.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 508
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 3/116 (2%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T + L L+ A L +P I ++ HT G N +S +
Sbjct: 391 TLKTRPVIFSSGSDQLTANGKQQLRQTAESLTHYPKFRILVEGHTGLRGDKALNEQLSAQ 450
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ-NNQ--RIEIQIFPR 185
RA +K YL+ R I G K P++ + R+ N+ R+EI +
Sbjct: 451 RAKAVKHYLVNELGFEARRIHAIGKGSKEPLERLSGESQRRYANRLMRVEIALLSE 506
>gi|298528936|ref|ZP_07016339.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298510372|gb|EFI34275.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 223
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 11/189 (5%)
Query: 5 LGLSMFIMTTISGCGLASRE--KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
L L MFI+ + + V + + N+ L + + +L G
Sbjct: 34 LMLVMFILFLVLFVFHTRETLVRVPVNQDGHWNQAVQNQSSSLQLQGLYTQAREKLSTPG 93
Query: 63 IVV----SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
V + G ++ L + LQ IA + + + TD
Sbjct: 94 APVSVKMTEQGSVLISLFGEVFFSPGSADLNPESNKYLQQIAE-IVSLAQGQVKVAGFTD 152
Query: 119 SIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
S ++ IS RA I L + + ++G P ++ VG +
Sbjct: 153 SRENSVQGDRSIFEISAMRAARIGEELTRSRGLRQENLVIQGHGTPRPQVPENSPVGSEM 212
Query: 175 NQRIEIQIF 183
N+R+EI+I
Sbjct: 213 NRRVEIRIV 221
>gi|77359764|ref|YP_339339.1| chemotaxis protein [Pseudoalteromonas haloplanktis TAC125]
gi|76874675|emb|CAI85896.1| putative chemotaxis protein [Pseudoalteromonas haloplanktis TAC125]
Length = 319
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 64/165 (38%), Gaps = 5/165 (3%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+ + ++ K S L K + +++D + D + + + F S
Sbjct: 106 DGQSDTSNIEQKLLGKPLDSLLAKLQSSLIDEIRDGEASLELSQDWLIIELSSGMLFSSG 165
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYL 141
+ + + I + I ++ +TD+ ++N +S RA +
Sbjct: 166 SSVAQVRAKQVVKIIKDIIAPVDNYIRVRGYTDNQTIGNEMYRSNWELSVARATAVLVE- 224
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
++ ++ +++ G+ P TNDTK GR N+++ I + G
Sbjct: 225 LESLGINSARMAIEGYGQYSPFATNDTKQGRAENRKVVIALSKYG 269
>gi|58584412|ref|YP_197985.1| Outer membrane protein, pal-like [Wolbachia endosymbiont strain TRS
of Brugia malayi]
gi|58418728|gb|AAW70743.1| Outer membrane protein, pal-like [Wolbachia endosymbiont strain TRS
of Brugia malayi]
Length = 159
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 39/109 (35%), Gaps = 7/109 (6%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + + L + +L P+ + + HTD+ G+ + N+ + RAD K
Sbjct: 44 VFFDYDKSDISEAGADTLLDVMEVLQDDPNVKVTLIGHTDNRGSYEYNVALGARRADAAK 103
Query: 139 SYLIQRGVSSNRFISVRGFAYKYP---IDTNDT----KVGRQNNQRIEI 180
++++ I P + + + N+R+E
Sbjct: 104 NFMVSCTPYLENRIKTASKGETEPLVYVADDSKNSKYEKEHAKNRRVEF 152
>gi|86132811|ref|ZP_01051403.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85816765|gb|EAQ37951.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 368
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 54/158 (34%), Gaps = 7/158 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
D + ++ D E Q ++ + L
Sbjct: 212 KDATTTEEVVAATFDTVSKEVLKQKGGLTTWREVECALVEYQALPINWNTNSATLTPAAK 271
Query: 94 PMLQ-LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
++ + +L + P + I SHTDS G +N +S+ RA + +YLI + +N +
Sbjct: 272 NIIDTRLMPLLAENPGVKLEIASHTDSRGAASSNQDLSERRAQSVANYLISK-GVNNSLL 330
Query: 153 SVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
GF + + T+ N+R E ++
Sbjct: 331 VANGFGERKLKNRCADGVSCTERQHAANRRTEFRLINN 368
>gi|288801512|ref|ZP_06406964.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039]
gi|288331593|gb|EFC70079.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039]
Length = 674
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 53/137 (38%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + L + +LN+ P+ I + +HTD G+ + N +SQ+R
Sbjct: 502 VLIDNIFYDFDKATLRPESTTSLDELVKLLNENPNVTIELSAHTDYRGSEEYNKKLSQKR 561
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFA------------YKYPIDTNDT------------- 168
A+ + +YLI S+ ++ G+ KYP D+
Sbjct: 562 AEAVVNYLIA-HGISSERLTPVGYGKEKPKKIKKKLTEKYPWLKEDSALTESFIQSLDKE 620
Query: 169 --KVGRQNNQRIEIQIF 183
++ Q N+R E +
Sbjct: 621 KQEICNQLNRRTEFIVL 637
>gi|330985312|gb|EGH83415.1| OmpA family protein [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 447
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 5/152 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
S + + + G + + L+ K
Sbjct: 298 SAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFRFAQGSARLDNKA 357
Query: 93 LPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L+ +A L + + + D+ L+S+ RA ++ L++ GV+
Sbjct: 358 QQDLKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAALLSRLRAMAVRRELLKSGVTFRD 417
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G + P+ TN+ GR N+R+E+ +
Sbjct: 418 ---IVGLGDEMPVATNEIDDGRIKNRRVEVWV 446
>gi|296130809|ref|YP_003638059.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
gi|296022624|gb|ADG75860.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
Length = 198
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 46/125 (36%), Gaps = 9/125 (7%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
++R +T + L + +A L + +A+ HTD +G
Sbjct: 77 ELAREAQGVTTLTSDLLFAFDSAELAPGAAGKIGELAAALPQ--GAAVAVDGHTDGLGGD 134
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-----KVGRQNNQRI 178
N+ +SQ RA + L ++V G P+ T GR N+R+
Sbjct: 135 AVNVPLSQARAQAVADALTAARPDL--VLTVTGHGSAQPVAEETTDGLDDPSGRALNRRV 192
Query: 179 EIQIF 183
E+++
Sbjct: 193 EVRVT 197
>gi|332291485|ref|YP_004430094.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332169571|gb|AEE18826.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 293
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 6/120 (5%)
Query: 72 ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI-----GTLKN 125
+ I + F + K+ +L+ IA ++N P+ + ++ HTDS LK+
Sbjct: 162 VQISISDKMLFRSGSYRVSKEADALLRRIAAVVNSEPAVEVMVEGHTDSRTVKKGSYLKD 221
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA I L + + G + P+ ND+K N+R I I P
Sbjct: 222 NWDLSVQRATAIVRELQTKHNVDPSKLIASGRSSYVPLVENDSKENMSRNRRTRILILPN 281
>gi|319776072|ref|YP_004138560.1| Outer membrane protein, OmpA/MotB [Haemophilus influenzae F3047]
gi|319896881|ref|YP_004135076.1| outer membrane protein, ompa/motb [Haemophilus influenzae F3031]
gi|329123235|ref|ZP_08251803.1| lipoprotein PlpD [Haemophilus aegyptius ATCC 11116]
gi|317432385|emb|CBY80740.1| Outer membrane protein, OmpA/MotB [Haemophilus influenzae F3031]
gi|317450663|emb|CBY86883.1| Outer membrane protein, OmpA/MotB [Haemophilus influenzae F3047]
gi|327471444|gb|EGF16892.1| lipoprotein PlpD [Haemophilus aegyptius ATCC 11116]
Length = 284
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L +K ++ ++ L + I I +TD +GT NL +SQ RA+ +
Sbjct: 149 DFLFDFDKDTLSEKGKKIIDKVSYQLKSNGAKDIKIAGYTDRLGTDSYNLELSQRRANSV 208
Query: 138 KSYLIQRGVSSNRFISVRGFAYK-YPIDTNDTKVGRQN------NQRIEIQ 181
K++L++ GV++ I+ G+ ND G+ N+R+EI
Sbjct: 209 KNHLVKDGVTAQ--ITAIGYGKNPQIKSCNDVPQGKALKDCLHPNRRVEII 257
>gi|270723293|ref|ZP_06223417.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270315265|gb|EFA27588.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 149
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L +K ++ ++ L + I I +TD +GT NL +SQ RA+ +
Sbjct: 34 DFLFDFDKDTLSEKGKKIIDKVSYQLKSNGAKDIKIAGYTDRLGTDSYNLELSQRRANSV 93
Query: 138 KSYLIQRGVSSNRFISVRGFAYK-YPIDTNDTKVGRQN------NQRIEIQ 181
K++L++ GV++ I+ G+ ND G+ N+R+EI
Sbjct: 94 KNHLVKDGVTAQ--ITAIGYGKNPQIKSCNDVPQGKALKDCLHPNRRVEII 142
>gi|320324614|gb|EFW80691.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. B076]
Length = 447
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 5/152 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
S + + + G + + L+ K
Sbjct: 298 SAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFRFAQGSARLDNKA 357
Query: 93 LPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L+ +A L + + + D+ L+S+ RA ++ L++ GV+
Sbjct: 358 QQDLKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAALLSRLRAMAVRRELLKSGVTFRD 417
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G + P+ TN+ GR N+R+E+ +
Sbjct: 418 ---IVGLGDEMPVATNEIDDGRIKNRRVEVWV 446
>gi|315180476|gb|ADT87390.1| hypothetical protein vfu_A02253 [Vibrio furnissii NCTC 11218]
Length = 271
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L + L+ I+ ++ P + I H+DS G NL +S+ RAD + +Y +
Sbjct: 173 ALTQNQRSQLEAISELVLFDPKIKTVRITGHSDSHGDTVVNLSVSRRRADDV-AYWMMMA 231
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ +RG +YP+ N T+ GR N+R+EI++ R
Sbjct: 232 GVPTEMMEIRGQGGRYPVGNNATEEGRLANRRVEIELVRR 271
>gi|238020123|ref|ZP_04600549.1| hypothetical protein VEIDISOL_02007 [Veillonella dispar ATCC 17748]
gi|237863647|gb|EEP64937.1| hypothetical protein VEIDISOL_02007 [Veillonella dispar ATCC 17748]
Length = 366
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + P L N++ I + + D+ T + N+ +S+ R
Sbjct: 259 VQSIYFDSDQDVARADQYPNLTAAVNAANQYSQDQIKLLGNADTDATPQYNVGLSERRVQ 318
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL+ GVS++RFI + P+ TN T G+ N+R+++ I
Sbjct: 319 YVAQYLVNNGVSADRFIGIA-NGDTKPVATNSTAAGKAENRRVDVYI 364
>gi|206890444|ref|YP_002248653.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206742382|gb|ACI21439.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 252
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 76/172 (44%), Gaps = 11/172 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-- 76
A +++ K + +S ++ KRF K +E +L+D I++ + + I
Sbjct: 78 SSAIQQEVKTSVQESTPSETRAKRFEEQFKKTIEEKLKELKD-HIMIDTVEGGVRIQIVD 136
Query: 77 --PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL---KNNLLISQ 131
+ +S +K +L+++A + P +A++ HTD++ N +S
Sbjct: 137 LEGEPMFPLSSAEPTEKAREILKVVAENIKDEP-ARVAVEGHTDAVPFRGGKTTNWELST 195
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + + + GV+ + V G+A P+ +D K R N+RI I +
Sbjct: 196 ARASSARREIERYGVAPEKIARVVGYADTLPLIKDDPKDPR--NRRISIILM 245
>gi|146282539|ref|YP_001172692.1| OmpA family protein [Pseudomonas stutzeri A1501]
gi|145570744|gb|ABP79850.1| OmpA family protein [Pseudomonas stutzeri A1501]
Length = 457
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 53/152 (34%), Gaps = 5/152 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
S + +R G E Q L D ++ L+ K
Sbjct: 308 SKAGQTIVERSGYVAQHVEAIRQTALADMPAFYQQLASEAQRLTVNFRFEEGSAQLDNKA 367
Query: 93 LPMLQLIATILNKFPSTV--IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L+ + L A+ D+ G L+S+ RA ++ L +RGV
Sbjct: 368 QRDLERVVEYLRDNGKLTDSAALVGFGDATGDPARAALLSKLRAMTVRRELNKRGVFLK- 426
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G + P+ +ND GR N+R+E+ +
Sbjct: 427 --EINGMGSELPVASNDAGSGRVKNRRVEVWV 456
>gi|262039986|ref|ZP_06013251.1| outer membrane protein A [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042654|gb|EEW43660.1| outer membrane protein A [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 364
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + +TD IG+ N +S++RA
Sbjct: 237 SDVLFNFNKATLKPEGQQALDQLYTQLSNIDPKDGSAVVLGYTDRIGSEAYNQQLSEKRA 296
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YL+ + IS RG P+ N D R ++R+EI++
Sbjct: 297 QSVVDYLVAK-GIPAGKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEV 352
>gi|89073344|ref|ZP_01159868.1| Putative sodium-type flagellar protein MotY [Photobacterium sp.
SKA34]
gi|89050831|gb|EAR56305.1| Putative sodium-type flagellar protein MotY [Photobacterium sp.
SKA34]
Length = 285
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
V + L K L IA + ++ + + DSI + +S+
Sbjct: 171 IAFSVLHYSENSDTLNKISQQRLAQIADFVRYSDDIDLVLVAAFNDSISGTTESQEMSER 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ ++ Y + + V + + PI N T +GR N+R+ I +
Sbjct: 231 RAEKLRQYFQSL-GLPDERVQVEAYGKRRPIADNSTPMGRNLNRRVVISL 279
>gi|302343736|ref|YP_003808265.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
gi|301640349|gb|ADK85671.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
Length = 260
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 7/158 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV-SRIGDMITCYIPVHVSFVS 84
+ S+ D + + G +
Sbjct: 65 TTQTMQSSSAVVAAMNPIDEDYVVLRGMVFENRLDDQVRLLRSQGMRTVVINADMLFAPG 124
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSY 140
L LP L +A ++ + +++ HTD ++N +S +RA + ++
Sbjct: 125 SAKLSPNILPFLDEVAAVIKDR-AYPLSVYGHTDDEPWRGKGGQDNWTLSAQRALSVVAH 183
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
L+ RGVS++R ++ G A PI +N T GR+ N R+
Sbjct: 184 LVSRGVSASR-LAAFGLAGTQPIASNTTAEGRRQNNRV 220
>gi|126736197|ref|ZP_01751940.1| OmpA domain protein [Roseobacter sp. CCS2]
gi|126714363|gb|EBA11231.1| OmpA domain protein [Roseobacter sp. CCS2]
Length = 564
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 48/138 (34%), Gaps = 8/138 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFP 107
E +Q+ + ++ L+ K L + ++ +
Sbjct: 429 QPREIGRAVQNQIATELPGANRLSLTFR---FPTDVFVLDSKGQRDLDRLVEFMSRPENA 485
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV---SSNRFISVRGFAYKYPID 164
+ + DS+G N +S++RA + + + +S G + P+
Sbjct: 486 NRELIFVGFADSVGQYVYNTQLSRDRAQQVLQQVRNHPNAGPLRSTRMSTVGLSEAAPVS 545
Query: 165 TNDTKVGRQNNQRIEIQI 182
ND GR N+R+E+ +
Sbjct: 546 CNDDAYGRSRNRRVEVWV 563
>gi|162451716|ref|YP_001614084.1| hypothetical protein sce3444 [Sorangium cellulosum 'So ce 56']
gi|161162298|emb|CAN93603.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
Length = 357
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 56/168 (33%), Gaps = 11/168 (6%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + + + G D + V G+ +
Sbjct: 80 GCKSTDPDGDGLVADADKCPTEAEVKNGYKDDDGCPDVPP--------VVLDGNEVKLN- 130
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERAD 135
+ E +L +A IL P + + ++++ +G + ++++RA+
Sbjct: 131 EKIAFVAGKPEFEPASQGLLANVAQILKDHPQIQFVEVAAYSEKVGNDAATVTLTKKRAE 190
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + G+ D +T+ ++ N+R+EI+I
Sbjct: 191 AVVK-ALTALGVEKNRVRAAGYGAHCATDPGETEEAKEKNRRVEIKIM 237
>gi|110086793|gb|ABG49460.1| hemagglutinin antigen [Avibacterium paragallinarum]
Length = 345
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + +L I + + S + + +TD IG+ NL +SQ RAD
Sbjct: 228 SDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRRADT 287
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQIFPRGN 187
+ +YL+ + + IS G+ P+ D GR +++R+EI + +GN
Sbjct: 288 VANYLVSK-GVAQEVISSTGYGEANPVTGAKCDAVKGRKALIACLADDRRVEISV--KGN 344
>gi|71734119|ref|YP_274824.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71554672|gb|AAZ33883.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 447
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 5/152 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
S + + + G + + L+ K
Sbjct: 298 SAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFRFAQGSARLDNKA 357
Query: 93 LPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L+ +A L + + + D+ L+S+ RA ++ L++ GV+
Sbjct: 358 QQDLKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAALLSRLRAMAVRRELLKSGVTFRD 417
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G + P+ TN+ GR N+R+E+ +
Sbjct: 418 ---IVGLGDEMPVATNEIDDGRIKNRRVEVWV 446
>gi|330010302|ref|ZP_08306729.1| outer membrane protein A [Klebsiella sp. MS 92-3]
gi|328534592|gb|EGF61172.1| outer membrane protein A [Klebsiella sp. MS 92-3]
Length = 364
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + +TD IG+ N +S++RA
Sbjct: 237 SDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRIGSEAYNQQLSEKRA 296
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YL+ + IS RG P+ N D R ++R+EI++
Sbjct: 297 QSVVDYLVAK-GIPAGKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEV 352
>gi|163802824|ref|ZP_02196713.1| sodium-type flagellar protein MotY [Vibrio sp. AND4]
gi|159173364|gb|EDP58187.1| sodium-type flagellar protein MotY [Vibrio sp. AND4]
Length = 293
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 87 FLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L K L IA + ++ + ++TDS + +S+ RA+ + +
Sbjct: 193 QLTKTSKKRLAQIADYVRHNQDIDLVLVSTYTDSTDGKSTSQNLSERRAESL-RTYFESL 251
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 252 GLSEDRIQVQGYGKRRPIADNGSPIGKDKNRRVVISL 288
>gi|283856455|ref|YP_163089.2| OmpA/MotB domain-containing protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|283775459|gb|AAV89978.2| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 366
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + + +L +A+ + + + +TD+ G K N+ +SQ RAD +K
Sbjct: 258 VFFDFDKYNITPEAASILDNVASSYAQTGQARVVVAGYTDTAGPAKYNMGLSQRRADSVK 317
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+YL+ + + ++ + + + V N+R+EI
Sbjct: 318 AYLVGK-GVPDDAMATEAYGKTHLLVQTADGVREPQNRRVEIT 359
>gi|241761684|ref|ZP_04759771.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241373992|gb|EER63525.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 363
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + + +L +A+ + + + +TD+ G K N+ +SQ RAD +K
Sbjct: 255 VFFDFDKYNITPEAASILDNVASSYAQTGQARVVVAGYTDTAGPAKYNMGLSQRRADSVK 314
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+YL+ + + ++ + + + V N+R+EI
Sbjct: 315 AYLVGK-GVPDDAMATEAYGKTHLLVQTADGVREPQNRRVEIT 356
>gi|327480795|gb|AEA84105.1| OmpA family protein [Pseudomonas stutzeri DSM 4166]
Length = 457
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 53/152 (34%), Gaps = 5/152 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
S + +R G E Q L D ++ L+ K
Sbjct: 308 SKAGQTIVERSGYVAQHVEAIRQTALADMPAFYQQLASEAQRLTVNFRFEEGSAQLDNKA 367
Query: 93 LPMLQLIATILNKFPSTV--IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L+ + L A+ D+ G L+S+ RA ++ L +RGV
Sbjct: 368 QRDLERVVEYLRDNGKLTDSAALVGFGDATGDPARAALLSKLRAMTVRRELNKRGVFLK- 426
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G + P+ +ND GR N+R+E+ +
Sbjct: 427 --EINGMGSELPVASNDAGSGRVKNRRVEVWV 456
>gi|325285003|ref|YP_004260793.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324320457|gb|ADY27922.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 647
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + + F+ +Q + L ++P VI ++SHTD+ T + NL +S
Sbjct: 531 YLKLDPIYFDLDKSFIRIDGQITMQQVFAYLKEYPEVVIEVRSHTDARATNEYNLALSNR 590
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
RA YL+ + +S +GF + D ++ Q N+R E +
Sbjct: 591 RAKETVKYLLDN-GIAPERVSGKGFGESELTNNCDSNSKCSEEEHQKNRRSEFIVV 645
>gi|170696031|ref|ZP_02887168.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170139023|gb|EDT07214.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 646
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 10/175 (5%)
Query: 15 ISGCGLASREKKKVFLHK--SNDTDIVNKRFGSSLDKAEDEFQMQLQD---TGIVVSRIG 69
+SG ++ + L D+ ++++A F+ ++
Sbjct: 469 LSGAAANAKLGWQSALKSLFGASYDVGAFDPEHAVEQATANFRSAVKALLTGNPTCVAAD 528
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS----TVIAIQSHTDSIGTLKN 125
+ V S + L A +LN + + ++D++G +
Sbjct: 529 IAKVLNLQVINFGSSSARVPAAANEDLGQSARVLNACARNGRVAKLEVAGYSDNVGGEQA 588
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
NL +S+ERA+ + + + + +G+ +PI NDT GR N+RIE
Sbjct: 589 NLQLSKERAEAV-RSYLVKAGVPGDSLRAQGYGQAHPIAGNDTASGRFANRRIEF 642
>gi|330890787|gb|EGH23448.1| OmpA family protein [Pseudomonas syringae pv. mori str. 301020]
Length = 447
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 5/152 (3%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
S + + + G + + L+ K
Sbjct: 298 SAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFRFAQGSARLDNKA 357
Query: 93 LPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L+ +A L + + + D+ L+S+ RA ++ L++ GV+
Sbjct: 358 QQDLKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAALLSRLRAMAVRRELLKSGVTFRD 417
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G + P+ TN+ GR N+R+E+ +
Sbjct: 418 ---IVGLGDEMPVATNEIDDGRIKNRRVEVWV 446
>gi|82523947|emb|CAI78669.1| OmpA protein [uncultured delta proteobacterium]
Length = 408
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++E+ + + L L++ + I I+ HTD G NL S ERA
Sbjct: 305 FGMNELAMNEAALAELKVFYNKVKDASG-KIVIEGHTDGHGDSAANLKASLERAVNTWRK 363
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
L G+S + +RG P+ N+T+ GR N+R+E+ P
Sbjct: 364 LQSMGLSDKIKVELRGVGGSKPVADNNTQEGRDKNRRVELTFTP 407
>gi|19881379|gb|AAM00932.1|AF491824_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + +L I + + S + + +TD IG+ NL +SQ RAD
Sbjct: 227 SDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDLAGYTDRIGSEAANLKLSQRRADT 286
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQIFPRGN 187
+ +YL+ + + IS G+ P+ D GR +++R+EI + +GN
Sbjct: 287 VANYLVSK-GVAQEVISSTGYGEANPVTGAKCDAVKGRKALIACLADDRRVEISV--KGN 343
>gi|146997|gb|AAA24239.1| outer membrane protein II [Escherichia blattae]
Length = 241
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + +TD IG+ N +SQ+RA
Sbjct: 123 SDVLFNFNKSTLKPEGQQALDQLYTQLSNLDPKDGAVVVLGYTDRIGSDAYNQRLSQQRA 182
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + I+ +G P+ T D R ++R+EI++
Sbjct: 183 QSVVDYLVSK-GIPAGKITAQGQGESNPVTGSTCDNVKQRAALIDCLAPDRRVEIEV 238
>gi|294792911|ref|ZP_06758057.1| outer membrane protein OprF [Veillonella sp. 6_1_27]
gi|294455856|gb|EFG24220.1| outer membrane protein OprF [Veillonella sp. 6_1_27]
Length = 345
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + P L N++ + + + D+ + N+ +S+ R
Sbjct: 238 VQSIYFDSDQDVARADQYPNLTAAVNAANQYSQDQVKLMGNADTDANPQYNIALSERRVQ 297
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL+ GVS++R I + P+ TN T G+ N+R+++ I
Sbjct: 298 HVAQYLVNHGVSADRLIGIA-NGDVKPVATNSTAAGKAENRRVDVYI 343
>gi|282848786|ref|ZP_06258180.1| OmpA family protein [Veillonella parvula ATCC 17745]
gi|294795118|ref|ZP_06760253.1| outer membrane porin F (Root adhesin) [Veillonella sp. 3_1_44]
gi|282581500|gb|EFB86889.1| OmpA family protein [Veillonella parvula ATCC 17745]
gi|294454480|gb|EFG22854.1| outer membrane porin F (Root adhesin) [Veillonella sp. 3_1_44]
Length = 345
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + P L N++ + + + D+ + N+ +S+ R
Sbjct: 238 VQSIYFDSDQDVARADQYPNLTAAVNAANQYSQDQVKLMGNADTDANPQYNIALSERRVQ 297
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL+ GVS++R I + P+ TN T G+ N+R+++ I
Sbjct: 298 HVAQYLVNHGVSADRLIGIA-NGDVKPVATNSTAAGKAENRRVDVYI 343
>gi|260364262|ref|ZP_05776961.1| flagellar motor protein MotB [Vibrio parahaemolyticus K5030]
gi|308113750|gb|EFO51290.1| flagellar motor protein MotB [Vibrio parahaemolyticus K5030]
Length = 278
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + ++ +++ + ++ + + +++ I V +G I +
Sbjct: 134 STQSNQSAESDMQQQQSEEMSQEMETLMESIKKALEREIEQGAIEVENLGQQIVIRMREK 193
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERA 134
+F FL+ KF P+++ IA ++ P + I HTD+ ++N +S +RA
Sbjct: 194 GAFPEGSAFLQPKFRPLVRQIAELVKDVPGI-VRISGHTDNQRLDSELYRSNWDLSSQRA 252
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYK 160
+ + + S++ + VRG A
Sbjct: 253 VSVAQEMEKVRGFSHQRLRVRGMADT 278
>gi|269797531|ref|YP_003311431.1| OmpA/MotB domain protein [Veillonella parvula DSM 2008]
gi|269094160|gb|ACZ24151.1| OmpA/MotB domain protein [Veillonella parvula DSM 2008]
Length = 345
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + P L N++ + + + D+ + N+ +S+ R
Sbjct: 238 VQSIYFDSDQDVARADQYPNLTAAVNAANQYSQDQVKLMGNADTDANPQYNIALSERRVQ 297
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL+ GVS++R I + P+ TN T G+ N+R+++ I
Sbjct: 298 HVAQYLVNHGVSADRLIGIA-NGDVKPVATNSTAAGKAENRRVDVYI 343
>gi|311280141|ref|YP_003942372.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
gi|308749336|gb|ADO49088.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
Length = 362
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S +RA
Sbjct: 235 SDVLFNFNKATLKPEGKQALDQLYSQLSNLDPKDGSVVVLGYTDRIGSEAYNQKLSTQRA 294
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + IS RG P+ T + R ++R+EI++
Sbjct: 295 QSVVDYLVSK-GIPANKISARGMGKSDPVTGSTCNNVKARAALIDCLAPDRRVEIEV 350
>gi|294140555|ref|YP_003556533.1| sodium-type flagellar protein MotY [Shewanella violacea DSS12]
gi|293327024|dbj|BAJ01755.1| sodium-type flagellar protein MotY [Shewanella violacea DSS12]
Length = 289
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V L + + + L + I ++TDS G N +S++
Sbjct: 177 IAFTVLTYESGGSELTRFSKSQIAKVQEYLAYDSEVELVLIDAYTDSYGGRSINQKVSEQ 236
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD +K++ + G++ +R +V G + + +N T R N+R+ I+I
Sbjct: 237 RADSVKNFFLSAGINQDRIYTV-GHGERRHVASNATIDERGRNRRVVIRI 285
>gi|259090535|gb|ACV91890.1| OprL [Pseudomonas fluorescens]
gi|259090539|gb|ACV91892.1| OprL [Pseudomonas fluorescens]
gi|259090545|gb|ACV91895.1| OprL [Pseudomonas fluorescens]
gi|259090553|gb|ACV91899.1| OprL [Pseudomonas fluorescens]
gi|259090561|gb|ACV91903.1| OprL [Pseudomonas fluorescens]
gi|259090573|gb|ACV91909.1| OprL [Pseudomonas fluorescens]
gi|259090575|gb|ACV91910.1| OprL [Pseudomonas fluorescens]
gi|259090581|gb|ACV91913.1| OprL [Pseudomonas fluorescens]
Length = 157
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/176 (13%), Positives = 53/176 (30%), Gaps = 24/176 (13%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKK-KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K + ++ GC + + N N E +
Sbjct: 3 MLKFGKFAALALALSVAVGCSSKGGDNAGEGAAVDPNAGYGANTGAVDGSLSEEAALRA- 61
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
I L+ + + L + A L + ++ +T
Sbjct: 62 ------------------ITTFYFEYDSSDLKPEAMRALDVHAKDLKGN-GARVVLEGNT 102
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
D GT + N+ + + RA ++ YL+ + S + + + + P+ T +
Sbjct: 103 DERGTREYNMALGERRAKAVQRYLVLQ-GVSPAQLELVSYGEERPVATGNDXQSWA 157
>gi|183598397|ref|ZP_02959890.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827]
gi|188020575|gb|EDU58615.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827]
Length = 357
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 13/132 (9%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDS 119
+ + + + + V F ++ L+ + L + L+ T + + TD
Sbjct: 215 VEPAPVVENKRFTLRSDVLFNFNKATLKPEGQQALNELYNELSSIDPTQGRVLVVGFTDR 274
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN--- 174
IG+ NL +SQ+RA + YL+ + I+ G + P+ N D GR
Sbjct: 275 IGSQNYNLPLSQKRAQSVVDYLVAK-GVPASAIAAEGRGKEDPVTGNKCDNVKGRAALIE 333
Query: 175 ----NQRIEIQI 182
++R+EI+I
Sbjct: 334 CLAPDRRVEIEI 345
>gi|19881371|gb|AAM00928.1|AF491820_1 hemagglutinin antigen [Avibacterium paragallinarum]
gi|19881381|gb|AAM00933.1|AF491825_1 hemagglutinin antigen [Avibacterium paragallinarum]
gi|19881383|gb|AAM00934.1|AF491826_1 hemagglutinin antigen [Avibacterium paragallinarum]
gi|38385761|gb|AAR19399.1| hemagglutinin antigen [Avibacterium paragallinarum]
gi|89147814|gb|ABD62756.1| hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + +L I + + S + + +TD IG+ NL +SQ RAD
Sbjct: 227 SDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDLAGYTDRIGSEAANLKLSQRRADT 286
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQIFPRGN 187
+ +YL+ + + IS G+ P+ D GR +++R+EI + +GN
Sbjct: 287 VANYLVSK-GVAQEVISSTGYGEANPVTGAKCDAVKGRKALIACLADDRRVEISV--KGN 343
>gi|284048599|ref|YP_003398938.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731]
gi|283952820|gb|ADB47623.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731]
Length = 235
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 63/166 (37%), Gaps = 25/166 (15%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
++ + LQ G+ V IP V F E ++++ + +
Sbjct: 51 TGNTELRNQLLKDVGKDLQAQGLQVRIDTKQGVLRIPESVLFESGEANIKEQGQAAVGKL 110
Query: 100 ATILNKFPST--------VIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQ---- 143
+ L K + + I+ HTD++ ++N +S +RA + +
Sbjct: 111 SQSLLKTMTRPEYREALETVFIEGHTDNVPIHNEFFQSNWELSTQRAINTWNLMRNDVPE 170
Query: 144 -RGVSSNR---FISVRGFAYKYPIDTN----DTKVGRQNNQRIEIQ 181
+ + R S G+A P+ N +++ GR N+RI+I+
Sbjct: 171 FNWLVNPRGEPIFSCSGYAETRPVRENGLDPNSEEGRAANRRIDIR 216
>gi|124004158|ref|ZP_01689004.1| immunogenic 75 kDa protein PG4 [Microscilla marina ATCC 23134]
gi|123990228|gb|EAY29727.1| immunogenic 75 kDa protein PG4 [Microscilla marina ATCC 23134]
Length = 660
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV--FLEKKFLPMLQ-LIA 100
G D+ + +++ + D + + + Y + F + L +
Sbjct: 513 GREADQDDPKYKKAVNDIHLQTTVYLKPVLGYEFEAIIFYDFARWEIRPDAAKELDERVL 572
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
T L P ++ + SHTD+ GT +NNL++SQ+RA YLI +G+ +R I +G+
Sbjct: 573 TFLKNNPKLIVELGSHTDARGTDQNNLILSQKRAKSAVDYLISKGIDPDR-IKAKGYGET 631
Query: 161 YP-IDTNDTKVGRQNNQRIEIQIF 183
I T+ Q N+R +++
Sbjct: 632 DLKIKEAKTEEEHQANRRTTVKVL 655
>gi|46398701|gb|AAS92036.1| IcmN protein [Legionella pneumophila]
Length = 170
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 62/172 (36%), Gaps = 9/172 (5%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
+ +S C + N+ + R + D + L GI V+ +G
Sbjct: 1 FLLLLSAC-------NRSGYIPENEVPKLPCRVDGACDATIIKMMTDLNKKGIKVASVGQ 53
Query: 71 MITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
IP F + L +L IA L +F I + S++ ++K +
Sbjct: 54 NYLISIPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSVKRERAL 113
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ R+ V+ YL + +R I +G PI + R N R+EI
Sbjct: 114 TLARSRVVSEYLWSQ-GVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEIT 164
>gi|260752248|ref|YP_003225141.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258551611|gb|ACV74557.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 366
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + + +L +A+ ++ + + +TD+ G K N+ +SQ RAD +K
Sbjct: 258 VFFDFDKYNITPEAASILDNVASSYSQTGQARVVVAGYTDTAGPAKYNMGLSQRRADSVK 317
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+YL+ + + ++ + + + V N+R+EI
Sbjct: 318 AYLVGK-GVPDDAMATEAYGKTHLLVQTADGVREPQNRRVEIT 359
>gi|126664571|ref|ZP_01735555.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
gi|126630897|gb|EBA01511.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
Length = 147
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 44/130 (33%), Gaps = 4/130 (3%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ G + ++ L + ML L + +
Sbjct: 10 ELLARATLAEGFQPDSCAESHKPRQLKFHYGYNKHQLSAADMDMLTRHGHYLRRNVHLHV 69
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ H+D+ GT +S+ RA + +LI+ + + G+ P+ T+
Sbjct: 70 RVHGHSDAFGTDDYGHFLSRMRASAVVRFLIEE-GVEEQRLKAVGWGSDRPLA---TRAD 125
Query: 172 RQNNQRIEIQ 181
N+R+E++
Sbjct: 126 HAANRRVELE 135
>gi|109896581|ref|YP_659836.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
gi|109698862|gb|ABG38782.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
Length = 368
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 57/167 (34%), Gaps = 1/167 (0%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G + + T+ + G K + I +
Sbjct: 192 GTAPGVKVDAMGCALAAAMTESDSDNDGVVDSKDKCANTPSTDQVDATGCSIFTEVEVEE 251
Query: 77 PVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + F + + + ++ A + +FPST I+ + + G N +S+ERA
Sbjct: 252 TLRILFANNSAEIANRANSDIRDFAAFMKRFPSTDTVIEGYASAPGESDYNQWLSEERAK 311
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ LI+ I+ GF +D K + N+RI ++
Sbjct: 312 AVRMVLIEDYDIKPARITAVGFGESKLLDAPTAKEANKINRRIVARV 358
>gi|290955106|ref|YP_003486288.1| lipoprotein [Streptomyces scabiei 87.22]
gi|260644632|emb|CBG67717.1| putative lipoprotein [Streptomyces scabiei 87.22]
Length = 393
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 54/161 (33%), Gaps = 7/161 (4%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKK 91
+ + + Q + + + T +P V+F + L
Sbjct: 228 AASGAASCTVRDDDVPRLPSASQRPVPVVPVGATPTSCKGTYVVPASVTFTADDARLAPG 287
Query: 92 FLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L+ +A L + V+ I HT +G + +S RA + L++ GVS
Sbjct: 288 ADRYLRPVADSLERCGTDVVVTITGHTARVGAGASGFALSGRRARAVSERLVRLGVSPAL 347
Query: 151 FISVRGFAYKYPIDTNDT----KVGRQ-NNQRIEIQIFPRG 186
SV G P N N+R+EI + P+
Sbjct: 348 IGSVEGVGSTRPRVDNMPGGVFAERLARQNRRVEITVTPKE 388
>gi|209964330|ref|YP_002297245.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
gi|209957796|gb|ACI98432.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
Length = 309
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 43/136 (31%), Gaps = 9/136 (6%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTV 110
+ + + I + V F LE +L + +L + P T
Sbjct: 166 QALEAAGLPPDVGFTVEDRRIAIELRDRVLFRSGSAALETAGTAVLDRLVPMLARMPGT- 224
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG----VSSNRFISVRGFAYKYPIDTN 166
I ++ HTD + S ++ + R + + G A P+ T
Sbjct: 225 ITVEGHTDPVAI-ATTRFPSNWELSAARAAAVVRHLVAAGVPAQRLRATGLADSRPLTT- 282
Query: 167 DTKVGRQNNQRIEIQI 182
N+R+EI I
Sbjct: 283 -DPARWAMNRRVEIVI 297
>gi|91224838|ref|ZP_01260098.1| hypothetical protein V12G01_01555 [Vibrio alginolyticus 12G01]
gi|91190384|gb|EAS76653.1| hypothetical protein V12G01_01555 [Vibrio alginolyticus 12G01]
Length = 1581
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 57/149 (38%), Gaps = 15/149 (10%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV---FLE---KKFLPMLQLIAT 101
+K E + +G + I + + + F L+ F + +A
Sbjct: 574 EKLEQALKDARDQSGNQIDAILVNSSRGAGIKIEFAFNSREKELKDHAPIFKQLAASLAN 633
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+L P+ + I+ H +GT K N+ +S ERA+ K L++ +SV F
Sbjct: 634 VLENEPNLRVEIEGHACQVGTEKANMQVSAERAEYAKKLLMKEFPVFEGRVSVAAFGESK 693
Query: 162 PI--------DTNDTKVGRQNNQRIEIQI 182
P+ + R N+R+ I+I
Sbjct: 694 PVYVPKQGEKVDRNNPNLR-QNRRVVIRI 721
>gi|19881367|gb|AAM00926.1|AF491818_1 hemagglutinin antigen [Avibacterium paragallinarum]
gi|19881373|gb|AAM00929.1|AF491821_1 hemagglutinin antigen [Avibacterium paragallinarum]
gi|19881385|gb|AAM00935.1|AF491827_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 341
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + +L I + + S + + +TD IG+ NL +SQ RAD
Sbjct: 224 SDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDLAGYTDRIGSEAANLKLSQRRADT 283
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQIFPRGN 187
+ +YL+ + + IS G+ P+ D GR +++R+EI + +GN
Sbjct: 284 VANYLVSK-GVAQEVISSTGYGEANPVTGAKCDAVKGRKALIACLADDRRVEISV--KGN 340
>gi|117925108|ref|YP_865725.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1]
gi|117608864|gb|ABK44319.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1]
Length = 322
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+G + L+ K L +L + + + + +Q HTDS N
Sbjct: 207 VGKNGCWSVNSIHFNTGSWELDAKALSVLNAAVATMKQHAAIRVEVQGHTDSRADDTFNK 266
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S +RA+ + Y+ ++G++ +RF++ F + +++ R N+R+E+ P
Sbjct: 267 KLSLKRAESVIWYMTKQGLARDRFVAAA-FGEQKLLNSEKNSDERLVNRRVELHRIP 322
>gi|242240116|ref|YP_002988297.1| outer membrane protein A [Dickeya dadantii Ech703]
gi|242132173|gb|ACS86475.1| OmpA domain protein transmembrane region-containing protein
[Dickeya dadantii Ech703]
Length = 354
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + TD +G+ + N +S +RA
Sbjct: 227 SDVLFNFNKATLKPEGQRSLDQLYTQLSTIDPKDGSVVVLGFTDRLGSDQYNQTLSTKRA 286
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + IS RG P+ T R ++R+EI++
Sbjct: 287 QSVVDYLVHK-GVPANKISARGMGKANPVSGATCANVKARAALIDCLAPDRRVEIEV 342
>gi|149908775|ref|ZP_01897435.1| hypothetical protein PE36_21279 [Moritella sp. PE36]
gi|149808049|gb|EDM67990.1| hypothetical protein PE36_21279 [Moritella sp. PE36]
Length = 284
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQE 132
L + + I ++ T + I H++SIG NNLL+SQ+
Sbjct: 170 VRDRNLYYSGGSYLLNTQQKQEMAAIVKYISLDGLVTKVLIDGHSNSIGNTVNNLLLSQQ 229
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RAD + + S + + VR +YP+ ++ T GR+ N+R+ ++I R
Sbjct: 230 RADDVY-MYLMEAGISTKLMEVRSHGDRYPLKSDRTASGREKNRRVNLRIIRR 281
>gi|330722438|gb|EGH00277.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC2047]
Length = 130
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 105 KFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
K I+++ HTDS+ ++N +S RA + L + GV ++ V GFA
Sbjct: 9 KNVEGKISVEGHTDSVPIATSVFRSNWDLSSARALSVAHELFKGGVLNSNRFMVTGFADA 68
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
P+ ND R N+R+EI I
Sbjct: 69 KPLVANDNAANRAKNRRVEIII 90
>gi|153831593|ref|ZP_01984260.1| OmpA family protein [Vibrio harveyi HY01]
gi|148872103|gb|EDL70920.1| OmpA family protein [Vibrio harveyi HY01]
Length = 350
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L + L + + ++ T I + HTD++G+ NL +S++RA+ +
Sbjct: 212 FQFGQKTLSRSQQSTLAALYSYISVDDRVTKILVDGHTDNVGSQLANLNVSRQRAEQVAE 271
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L+Q+GV + I VR +YPI +N+T+ G+ N+R+ +++
Sbjct: 272 ALVQQGVDRS-LIEVRAHGSRYPIASNNTQAGQAKNRRVTLRLV 314
>gi|152978717|ref|YP_001344346.1| OmpA domain-containing protein [Actinobacillus succinogenes 130Z]
gi|150840440|gb|ABR74411.1| OmpA domain protein transmembrane region-containing protein
[Actinobacillus succinogenes 130Z]
Length = 356
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 52/122 (42%), Gaps = 12/122 (9%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ L+ + L I + + + S +A+ + D IG NL +SQ RA+
Sbjct: 235 SDVTFGFNKSTLKPEAASTLDGIYSEIAQVSSPAVAVNGYADRIGKDAANLKLSQRRAET 294
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQIFPRGN 187
+ +YL+ + + I+ G+ P+ N ++R+E+Q+ +GN
Sbjct: 295 VANYLVSK-GVDSNAITATGYGSANPVTGNTCDAVKGRKALIACLAPDRRVEVQV--QGN 351
Query: 188 IK 189
+
Sbjct: 352 KQ 353
>gi|254467600|ref|ZP_05081009.1| OmpA/MotB domain protein [Rhodobacterales bacterium Y4I]
gi|206684348|gb|EDZ44832.1| OmpA/MotB domain protein [Rhodobacterales bacterium Y4I]
Length = 191
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 58/188 (30%), Gaps = 11/188 (5%)
Query: 2 IKELGLSMFIMTTISG--------CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
+K + S+ + S E+ K +V + + +
Sbjct: 4 LKGIFASVLGTGLMFAPLAQAQSNGSELSVEEITEAFKKQKTRGLVIVPSSTDQSQDTAQ 63
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ + + + + F L P L + + TV I
Sbjct: 64 ETATVAAAAEEYNPVDQQTQINVQISFDF-DSAALRADQAPKLANMCESMKLMGGTVFQI 122
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
HTDS G+ N +S RA ++ +LI + G P + ++ +
Sbjct: 123 IGHTDSSGSASYNERLSLLRAQEVRRHLISSCGVPEDMLKAIGMGETAPFNQDNPRAD-- 180
Query: 174 NNQRIEIQ 181
N+R+E Q
Sbjct: 181 ENRRVEFQ 188
>gi|313201413|ref|YP_004040071.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
gi|312440729|gb|ADQ84835.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
Length = 356
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQL-IATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERA 134
+ + L+++ +L + + P + I HTD IG N +S+ RA
Sbjct: 237 SEVLFGFDKDNLKEEGKKVLNADVVEKMKAHPEVELVLITGHTDRIGDEAYNQKLSERRA 296
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR------QNNQRIEIQI 182
+ +K YL+ +G+ ++R +V G P+ G+ Q N+R+ ++I
Sbjct: 297 NAVKKYLVSQGIEASRLHAV-GKGEAEPVVDCQGVRGKKAIACLQPNRRVVVEI 349
>gi|253999390|ref|YP_003051453.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4]
gi|253986069|gb|ACT50926.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4]
Length = 356
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQL-IATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERA 134
+ + L+++ +L + + P + I HTD IG N +S+ RA
Sbjct: 237 SEVLFGFDKDNLKEEGKKVLNADVVEKMKAHPEVELVLITGHTDRIGDEAYNQKLSERRA 296
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR------QNNQRIEIQI 182
+ +K YL+ +G+ ++R +V G P+ G+ Q N+R+ ++I
Sbjct: 297 NAVKKYLVSQGIEASRLHAV-GKGEAEPVVDCQGVRGKKAIACLQPNRRVVVEI 349
>gi|51595793|ref|YP_069984.1| outer membrane protein A [Yersinia pseudotuberculosis IP 32953]
gi|108806724|ref|YP_650640.1| outer membrane protein A [Yersinia pestis Antiqua]
gi|108812705|ref|YP_648472.1| outer membrane protein A [Yersinia pestis Nepal516]
gi|145598823|ref|YP_001162899.1| outer membrane protein A [Yersinia pestis Pestoides F]
gi|149366590|ref|ZP_01888624.1| putative outer membrane porin A protein [Yersinia pestis CA88-4125]
gi|162418551|ref|YP_001607555.1| outer membrane protein A [Yersinia pestis Angola]
gi|165924613|ref|ZP_02220445.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165940134|ref|ZP_02228667.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011945|ref|ZP_02232843.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211728|ref|ZP_02237763.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167402334|ref|ZP_02307802.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419876|ref|ZP_02311629.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424140|ref|ZP_02315893.1| outer membrane protein A [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170024855|ref|YP_001721360.1| outer membrane protein A [Yersinia pseudotuberculosis YPIII]
gi|186894876|ref|YP_001871988.1| outer membrane protein A [Yersinia pseudotuberculosis PB1/+]
gi|218928581|ref|YP_002346456.1| outer membrane protein A [Yersinia pestis CO92]
gi|229841410|ref|ZP_04461569.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843520|ref|ZP_04463663.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. India 195]
gi|229894379|ref|ZP_04509562.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis Pestoides A]
gi|270486903|ref|ZP_06203977.1| outer membrane protein A [Yersinia pestis KIM D27]
gi|294503419|ref|YP_003567481.1| putative outer membrane porin A protein [Yersinia pestis Z176003]
gi|55976558|sp|Q8ZG77|OMPA_YERPE RecName: Full=Outer membrane protein A; Flags: Precursor
gi|55977792|sp|P38399|OMPA_YERPS RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
gi|51589075|emb|CAH20693.1| putative outer membrane porin A protein [Yersinia
pseudotuberculosis IP 32953]
gi|108776353|gb|ABG18872.1| outer membrane porin A protein [Yersinia pestis Nepal516]
gi|108778637|gb|ABG12695.1| putative outer membrane porin A protein [Yersinia pestis Antiqua]
gi|115347192|emb|CAL20086.1| putative outer membrane porin A protein [Yersinia pestis CO92]
gi|145210519|gb|ABP39926.1| outer membrane porin A protein [Yersinia pestis Pestoides F]
gi|149290964|gb|EDM41039.1| putative outer membrane porin A protein [Yersinia pestis CA88-4125]
gi|162351366|gb|ABX85314.1| outer membrane protein A [Yersinia pestis Angola]
gi|165911957|gb|EDR30601.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
IP275]
gi|165923673|gb|EDR40805.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989112|gb|EDR41413.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207499|gb|EDR51979.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962617|gb|EDR58638.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048300|gb|EDR59708.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056989|gb|EDR66752.1| outer membrane protein A [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169751389|gb|ACA68907.1| OmpA domain protein transmembrane region-containing protein
[Yersinia pseudotuberculosis YPIII]
gi|186697902|gb|ACC88531.1| OmpA domain protein transmembrane region-containing protein
[Yersinia pseudotuberculosis PB1/+]
gi|229689128|gb|EEO81191.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697776|gb|EEO87823.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229703777|gb|EEO90793.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis Pestoides A]
gi|262361462|gb|ACY58183.1| putative outer membrane porin A protein [Yersinia pestis D106004]
gi|262365389|gb|ACY61946.1| putative outer membrane porin A protein [Yersinia pestis D182038]
gi|270335407|gb|EFA46184.1| outer membrane protein A [Yersinia pestis KIM D27]
gi|294353878|gb|ADE64219.1| putative outer membrane porin A protein [Yersinia pestis Z176003]
gi|320015699|gb|ADV99270.1| outer membrane protein A [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 353
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 49/144 (34%), Gaps = 12/144 (8%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--P 107
ED + T + + ++ L+ + L + L+
Sbjct: 199 QEDAAAPIVAPTPAPAPIVDTKRFTLKSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPK 258
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ + D IG NL +SQ RAD ++ YL+ + I+ RG P+ N
Sbjct: 259 DGSVVVLGFADRIGQPAPNLALSQRRADSVRDYLVSK-GIPADKITARGEGQANPVTGNT 317
Query: 168 TK---------VGRQNNQRIEIQI 182
++R+EI++
Sbjct: 318 CDNVKPRAALIECLAPDRRVEIEV 341
>gi|91975492|ref|YP_568151.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91681948|gb|ABE38250.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 217
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 63/193 (32%), Gaps = 18/193 (9%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ------- 57
+ L++ +SG + + + D + SL A +
Sbjct: 17 ISLALAAFVLVSGLAINPNAAQAGEVSAQQIRDQLKGAKTRSLSGARAAVSPEELATVKR 76
Query: 58 -------LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL--NKFPS 108
++ I + L + P L+ + L +
Sbjct: 77 ISQIRSLSAGDREQMAAIAAKRPAIDLEINFDYNSAALTPRAEPQLKSLGDALISSDLKD 136
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+++ + HTD+ G N +S+ RA+ +K YLI R + G+ K D
Sbjct: 137 SIVMLAGHTDAKGGDDYNQTLSERRAESVKRYLIDRYSIRPDHLVAVGYGKKQLKDP-SD 195
Query: 169 KVGRQNNQRIEIQ 181
+G N+R++I
Sbjct: 196 PLG-AENRRVQIV 207
>gi|119385186|ref|YP_916242.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119374953|gb|ABL70546.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
Length = 197
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 63/190 (33%), Gaps = 14/190 (7%)
Query: 4 ELGLSMFIMT-TISGCGLASREKKKVFLHK-----SNDTDIVNKRFGSSLDKA------E 51
GL++ ++G ++ L + + + LD E
Sbjct: 7 RTGLAILCGICLLAGSAQGQDLTEEQILQRFEAQREMYRATLQGQKTRGLDMISVTQGGE 66
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ +G VV + P L+ + + + + +
Sbjct: 67 QGATEATEPSGTVVFGEFAPELQVNIAIRFAFDSASIAPDQRPALERMCSAMRQSDVGLF 126
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I HTD+ G+ N +S+ RA+ ++ +L+Q + + G ++ + D
Sbjct: 127 RIVGHTDAKGSDSYNETLSKLRAEEVRRWLVQDCGITASRLEALGMGKRFLANPADPAA- 185
Query: 172 RQNNQRIEIQ 181
N+R+E Q
Sbjct: 186 -AENRRVEFQ 194
>gi|313886427|ref|ZP_07820146.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
gi|312924108|gb|EFR34898.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
Length = 647
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 28/136 (20%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I L + L + T+L + P + + S+TD G+ N +SQ RA
Sbjct: 512 QIHDIYYDFDRASLRPEGKKSLDYLITLLEQNPEVRLELSSNTDRKGSQAYNQKLSQRRA 571
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI-----------------------DTNDTKV- 170
+ YLI + + + RG+ + P T+
Sbjct: 572 QSVVDYLIAK-GIAADRLEARGYGKERPYVVTKGMAARFDWLPEGQELTAEWVDTLTEEQ 630
Query: 171 ---GRQNNQRIEIQIF 183
Q N+R E +
Sbjct: 631 QIVCDQLNRRTEFTVI 646
>gi|288959276|ref|YP_003449617.1| outer membrane protein [Azospirillum sp. B510]
gi|288911584|dbj|BAI73073.1| outer membrane protein [Azospirillum sp. B510]
Length = 146
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++ + +L +A ++ +T I HTD++G NL +S+ RA + Y
Sbjct: 44 FDFNSAVIKPESRAVLDKVAAVMTTAGTTRFRIVGHTDAVGGDAANLALSKRRAAAVVEY 103
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L R + V G + + + N+R+EI
Sbjct: 104 LASRHRIQRDRLEVSGMGARELLLPDQPTA--AANRRVEII 142
>gi|220905442|ref|YP_002480754.1| OmpA/MotB domain-containing protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869741|gb|ACL50076.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 235
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 15/131 (11%), Positives = 46/131 (35%), Gaps = 6/131 (4%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIA 112
+ + +S + + + F L + +L + +++ ++ + +
Sbjct: 93 MADSVPQSASGISADDVGVQLRVNSDIMFKPGTVELLPEGDKVLSSVLSLMEEY-NLYLV 151
Query: 113 IQSHTDSI---GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
++ H DS+ + +S RA + + + + + + P+ +
Sbjct: 152 VRGHADSVEAAPPYASAWELSGARAAAMVN-YLAQRGIKATRMRAVSYGDTRPLKPGIDE 210
Query: 170 VGRQNNQRIEI 180
R N+R+E
Sbjct: 211 QSRAMNRRVEF 221
>gi|87119461|ref|ZP_01075358.1| flagellar motor protein [Marinomonas sp. MED121]
gi|86164937|gb|EAQ66205.1| flagellar motor protein [Marinomonas sp. MED121]
Length = 281
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIA 112
Q+ I ++ I + + F E L + + +L I+ +L ++ S I
Sbjct: 136 LGEYQQNGLISINESELWIEIELKAGLLFSSGEFELTNEAVAVLMSISEVLKRY-SYPIV 194
Query: 113 IQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++ HTD++ +N +S RA + L+ G + + I+V G + + P N
Sbjct: 195 VEGHTDNLPVSSNKYTSNWQLSSARASSVVDELV-NGGINPQLIAVLGLSSEKPKVRNSN 253
Query: 169 KVGRQNNQRIEIQI 182
R N+R+ ++I
Sbjct: 254 DFSRARNRRVTLKI 267
>gi|326794029|ref|YP_004311849.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326544793|gb|ADZ90013.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 272
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 3/134 (2%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L + V + I + + P+L +A L P + + HT
Sbjct: 123 LGEAHDDVLADILPLLERISRTNFASASAAMPDAMPPLLDELAKWLILNPHYKVTLVGHT 182
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
DS G+++ N ++ +RA I YLI V +++ + G PI N ++ R+ N+R
Sbjct: 183 DSQGSIEENEHLALDRAATISRYLIAHNVDAHQ-LRCNGEGPWNPISHNASEQSRKYNRR 241
Query: 178 IEIQI--FPRGNIK 189
+E+ + IK
Sbjct: 242 VEVDVSRIEEDTIK 255
>gi|161525435|ref|YP_001580447.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|171316170|ref|ZP_02905394.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|189349827|ref|YP_001945455.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616]
gi|221201252|ref|ZP_03574292.1| OmpA family protein [Burkholderia multivorans CGD2M]
gi|221206294|ref|ZP_03579307.1| OmpA family protein [Burkholderia multivorans CGD2]
gi|221213575|ref|ZP_03586549.1| OmpA family protein [Burkholderia multivorans CGD1]
gi|254252935|ref|ZP_04946253.1| OmpA/MotB [Burkholderia dolosa AUO158]
gi|124895544|gb|EAY69424.1| OmpA/MotB [Burkholderia dolosa AUO158]
gi|160342864|gb|ABX15950.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
gi|171098679|gb|EDT43474.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|189333849|dbj|BAG42919.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616]
gi|221166364|gb|EED98836.1| OmpA family protein [Burkholderia multivorans CGD1]
gi|221173603|gb|EEE06037.1| OmpA family protein [Burkholderia multivorans CGD2]
gi|221179102|gb|EEE11509.1| OmpA family protein [Burkholderia multivorans CGD2M]
Length = 222
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + + V+ +TD IG+ K N +S RA +
Sbjct: 98 DALFDFDKATLKPLGKQKLDELASKIQGMNTEVVVATGYTDRIGSDKYNDRLSLRRAQAV 157
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIFPRGNIKK 190
KSYL+ + I G + P+ T + R ++R+E+++ ++K
Sbjct: 158 KSYLVSK-GVPANKIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTQEVQK 216
>gi|83950067|ref|ZP_00958800.1| OmpA family protein [Roseovarius nubinhibens ISM]
gi|83837966|gb|EAP77262.1| OmpA family protein [Roseovarius nubinhibens ISM]
Length = 220
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 3/122 (2%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + G V + + V+F + L+ L+ A + +FP +
Sbjct: 50 AMTNEGAYVYNLSHRFANEVATTVNFAFNSAQLDAGARDTLREQAHWIRQFPEVRFRVYG 109
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD +G+ N + RA + +YL +G+S++R +V F P+ T+ + N
Sbjct: 110 HTDKVGSHGYNKALGMARARAVVAYLASQGISTSRLEAVASFGETQPLIV--TEGRERRN 167
Query: 176 QR 177
+R
Sbjct: 168 RR 169
>gi|146301688|ref|YP_001196279.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146156106|gb|ABQ06960.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 653
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 66/162 (40%), Gaps = 9/162 (5%)
Query: 31 HKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDTGIVVSRIGDMI--TCYIPVHVSFVSEVF 87
+ V + LD E E ++ I +IG + T I + + +
Sbjct: 492 PAKESSFAVTTSIDNKLDFTLEKEKIAAIEIPEIKAIKIGTDLGKTLNISMIYFDLGKWN 551
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
+ L I ++ ++P I I+SHTDS + K+NL++S +RA I ++L+ +
Sbjct: 552 ITDAAAVELGKILAVMQEYPKMRIDIRSHTDSRSSAKSNLVLSDKRAKSIMAWLVSK-GI 610
Query: 148 SNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFP 184
+ + +G+ ++ ++ N+R E I
Sbjct: 611 DAKRLRGKGYGESQLLNRCKDGVKCSEEEHLKNRRSEFMIIS 652
>gi|152995560|ref|YP_001340395.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
gi|150836484|gb|ABR70460.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
Length = 296
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ + V L + L L+A ++ PS I I HTD IG+ ++N +S+
Sbjct: 181 IARTAALFPTNGVNLTDRIKARLDLVALYVSSDPSVEYIYIDGHTDVIGSRRDNRELSKV 240
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ + SYL+++GV + + IS R +YP TN+T GR+ N+R+ I++
Sbjct: 241 RAEKVTSYLLEKGVPAGKIIS-RYHGERYPSTTNNTAQGRERNRRVTIRL 289
>gi|115350969|ref|YP_772808.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|170698423|ref|ZP_02889496.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|172059974|ref|YP_001807626.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|115280957|gb|ABI86474.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
gi|170136676|gb|EDT04931.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|171992491|gb|ACB63410.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 222
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + + V+ +TD IG+ K N +S RA +
Sbjct: 98 DALFDFDKATLKPLGKQKLDELASKIQGMNTEVVVATGYTDRIGSDKYNDRLSLRRAQAV 157
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIFPRGNIKK 190
KSYL+ + I G + P+ T + R ++R+E+++ ++K
Sbjct: 158 KSYLVSK-GVPANKIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTQEVQK 216
>gi|126661869|ref|ZP_01732868.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
gi|126625248|gb|EAZ95937.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
Length = 295
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 8/132 (6%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE-KKFLPMLQLIATILNKFPSTVIAIQS 115
+L T +++GD + ++ F + + LP+++ + + P I IQ
Sbjct: 169 ELHQTPYDTAKVGDKLVMN---NLYFYDRSGIFVPESLPVMEELLEFMIAHPKVKIEIQG 225
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQ 173
H ++ I+ RA + +YL+ + R + + F P+ + R
Sbjct: 226 HIC-CQLGEDPEDIALIRAIAVHNYLVANDIDDKRLMY-KSFGSTQPLHKIPEKNEKERN 283
Query: 174 NNQRIEIQIFPR 185
N+R+EI I
Sbjct: 284 ENRRVEILILEN 295
Score = 40.8 bits (94), Expect = 0.096, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 45/115 (39%), Gaps = 14/115 (12%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ-SHTDSIGTLKNNLLISQERAD 135
+ K + T LNK + I I + D GT N ++ +R +
Sbjct: 18 ESFYFDFDQDKFNPKQNEL---FLTWLNKDENREILIINGYCDWYGTFDYNDTLAYKRIN 74
Query: 136 VIKSYLIQR---GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ--IFPR 185
I++ L + + + I ++G+ + T+ R+ N+R+++ + P
Sbjct: 75 TIQNELQTKENATIFFSDKIIIKGYGERV-----QTRKERRFNRRVDVFYNVLPN 124
>gi|117621479|ref|YP_855927.1| ompA family protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117562886|gb|ABK39834.1| ompA family protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 308
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 72/177 (40%), Gaps = 11/177 (6%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL----QDTGIVVSRIGD 70
+S + + + + G +L K + + Q + + ++ +
Sbjct: 81 VSAASSVLESATARSPSLAPISVVPIAQDGMTLAKIDTQLQESMGSLVDAGVVKLTLNDN 140
Query: 71 MITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKN 125
+T + + F F+ P+L +++IL + + + ++ +TD+ ++
Sbjct: 141 WLTVELSSGLLFGSGSAFMSTNADPVLNTLSSILKQVDNY-VRVRGYTDNQQINNEIFRS 199
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S RA+ + + LI + + + ++ + P N T+ GR N+++ + I
Sbjct: 200 NWTLSAARAEAVLTALIAK-GIAPQRLAYEAYGEFSPFTDNSTEQGRLQNRKVVVAI 255
>gi|147003|gb|AAA24242.1| outer membrane protein II [Escherichia blattae]
Length = 240
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + +TD IG+ N +SQ+RA
Sbjct: 122 SDVLFNFNKSTLKPEGQQALDQLYTQLSNLDPKDGAVVVLGYTDRIGSDAYNQRLSQQRA 181
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + I+ +G P+ T D R ++R+EI++
Sbjct: 182 QSVVDYLVSK-GIPAGKITAQGQGESNPVTGSTCDNVKQRAALIDCLAPDRRVEIEV 237
>gi|148259380|ref|YP_001233507.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|326402601|ref|YP_004282682.1| outer membrane lipoprotein Omp16 [Acidiphilium multivorum AIU301]
gi|146401061|gb|ABQ29588.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
gi|325049462|dbj|BAJ79800.1| outer membrane lipoprotein Omp16 [Acidiphilium multivorum AIU301]
Length = 167
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 24/159 (15%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C A + + +E + V+ +GD
Sbjct: 18 CSNAPKTTAMATGSGATAAQSGPAP------GSEQQL----------VADVGDR------ 55
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ L L A+ L K+P+ + I + D GT NL + RA
Sbjct: 56 -AFFGFNKSNLTGADKATLDRQASWLAKYPNVDVLIAGNADPRGTEAYNLALGARRAHAA 114
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+ YL+ +GV+++R +V + + +T+ ++
Sbjct: 115 RDYLVAKGVAASRIQTVS-YGKSCLVSPGNTEQDYAQDR 152
>gi|269962899|ref|ZP_06177239.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832453|gb|EEZ86572.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 305
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 45/121 (37%), Gaps = 2/121 (1%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
D E L+ + L L L I + HTD IG+L N +
Sbjct: 180 DRKIYMAMTPHFDFDESELKPEDLAKLDSFTDKLQGLQG-SILVAGHTDQIGSLLYNEKL 238
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+Q RA + YL + S V+ F P+ +K N+R +F G+I+
Sbjct: 239 AQRRASEVVKYLKTKIDPSQFLWEVKSFGELQPVINERSKEANALNRRA-FIVFKEGSIE 297
Query: 190 K 190
+
Sbjct: 298 Q 298
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 26/189 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K L + I+GC + ++ N+ + LD ++ L
Sbjct: 1 MKTTLRLLGGVVGTLLIAGCATDTYVSQE------------NRDKFTDLDVSKFLISECL 48
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I + H +F + + L + I I HTD
Sbjct: 49 APE--------REIHIAVAEHFAF-DKYNIRDVDATSLNAFVHEIEGLSG-RITIVGHTD 98
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G+L+ N +S RA ++S+L ++ + V+ F P+ T R N+R
Sbjct: 99 YKGSLEYNEALSLRRAQSVESFLKEKLDPDHYDWEVKYFGETQPLALGKTDEDRAENRRA 158
Query: 179 EIQIFPRGN 187
+F
Sbjct: 159 -FVVFEEAQ 166
>gi|313677243|ref|YP_004055239.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312943941|gb|ADR23131.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 771
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 6/111 (5%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
V + K+ LQ I + I I + + G + N +S +RA + +
Sbjct: 667 YFDVGASEFDAKYNEQLQEIYQKIKGNEQLGIQISGYASAEGDPEFNRKLSNKRAIEVVN 726
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + R I +G+ N+R+E+QI NI +
Sbjct: 727 FFNYK-GIVRRRIIAKGYGSTR--ADTKDA---AENRRVEVQIVDLNNIDR 771
>gi|114765063|ref|ZP_01444210.1| Possible outer membrane protein, OmpA family [Pelagibaca
bermudensis HTCC2601]
gi|114542610|gb|EAU45635.1| Possible outer membrane protein, OmpA family [Roseovarius sp.
HTCC2601]
Length = 452
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 6/117 (5%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV--IAIQSHTDSIGTLKNNLLI 129
+ V ++ + + P++ IA ++ + + + HTDSI +N
Sbjct: 332 VIQATQPEVFRSAKADINDVYSPLVGSIAQVIRDNIEFIGAVRVVGHTDSIPVQTSNPFR 391
Query: 130 SQERADVIKSYLIQRG----VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S + ++ I +S G A + PI N T+ GR N+R+E+ +
Sbjct: 392 SNQGLSEARAKTIADMLRAQGVPAELVSSEGRAAEDPIADNGTRDGRARNRRVEVIL 448
>gi|91775931|ref|YP_545687.1| OmpA/MotB [Methylobacillus flagellatus KT]
gi|91709918|gb|ABE49846.1| OmpA/MotB [Methylobacillus flagellatus KT]
Length = 363
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQL-IATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERA 134
+ + L+++ L + + P + I HTD IG N +S+ RA
Sbjct: 244 SEVLFGFDKDNLKEEGKAKLNADVVEKMKAHPEVELVLITGHTDRIGDETYNQKLSERRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK------VGRQNNQRIEIQI 182
+ +K YLI +G+ +R +V G P+ Q N+R+ ++I
Sbjct: 304 NTVKQYLISQGIEESRLHAV-GKGESEPVVECAGVRGKKAIECLQPNRRVVVEI 356
>gi|251792544|ref|YP_003007270.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
gi|247533937|gb|ACS97183.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
Length = 363
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 11/134 (8%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
Q +V+ + V+F ++ L L I + + K +A+ +T
Sbjct: 227 QGAAPIVAPEVATKVFTLKSDVTFAFNKANLRPNAQATLDGIYSEIAKVNKPNVAVSGYT 286
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK-------- 169
D IG+ N +SQ+RA+ + +YL+ + + IS G+ P+ N
Sbjct: 287 DRIGSDAYNQKLSQKRAETVANYLVSK-GVAQDTISATGYGKANPVTGNQCNAVKGRKAL 345
Query: 170 -VGRQNNQRIEIQI 182
+++R+EI +
Sbjct: 346 IACLADDRRVEIAV 359
>gi|157373221|ref|YP_001471821.1| hypothetical protein Ssed_0080 [Shewanella sediminis HAW-EB3]
gi|157315595|gb|ABV34693.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
Length = 304
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQ 131
L L+ IA + + I + +H D+ G NL++S+
Sbjct: 175 YVRRVDIQFESGTSKLTAAHEVDLEAIAQYVQADATVKEILVDAHADASGEHLANLVLSK 234
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
ERAD + S + + I VR + PI +N++ GR+ N+R+ I++
Sbjct: 235 ERADEVAS-RLFELGIQKQKIQVRHHGARSPIVSNNSPEGREINRRVTIRLI 285
>gi|330830616|ref|YP_004393568.1| putative porin [Aeromonas veronii B565]
gi|328805752|gb|AEB50951.1| putative porin [Aeromonas veronii B565]
Length = 512
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+L+ A ++ + V + ++ + + L + L ++ +A +
Sbjct: 96 EENLNIATEKLTVAEPSAVTGVPQDAGLVAQIPDSGMFAIGSAQLTESGLRVVTKLAQLY 155
Query: 104 NK------FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+K + I + H+D+ G + NL +S++RA + ++ FI +G
Sbjct: 156 SKPAAADASNARRILLVGHSDATGPAELNLRLSEQRARAVGK-ILVASGIPASFIYYQGA 214
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQ 181
PI N + R N+R+EI
Sbjct: 215 GSSRPIADNSDPLLRGQNRRVEIV 238
>gi|116249010|ref|YP_764851.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115253660|emb|CAK12053.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 184
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 44/116 (37%), Gaps = 1/116 (0%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ D I L+ + L A L+K P+ ++ +Q D G+
Sbjct: 59 VAAGSEEDFILNVGRRIYFAQDSATLDSVAMATLDNQAAWLSKNPTWLLKLQGFADDSGS 118
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ +SQ+RAD +YL + R + +G+ + + + N+R+
Sbjct: 119 ASSMETLSQKRADAAMAYLASK-GVEARRMWAKGYGNDREVRDCTERSCKVQNRRV 173
>gi|198282220|ref|YP_002218541.1| peptidoglycan-associated lipoprotein [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218667535|ref|YP_002424585.1| peptidoglycan-associated lipoprotein, putative [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198246741|gb|ACH82334.1| peptidoglycan-associated lipoprotein [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218519748|gb|ACK80334.1| peptidoglycan-associated lipoprotein, putative [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 192
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 57/166 (34%), Gaps = 3/166 (1%)
Query: 18 CGLA--SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
C S ++ G ++ + +S
Sbjct: 21 CAHNVGSGAPTTAGAVAPANSAATAGLAGEGINGQNLNANGPIGGGSSGLSAAELAALPQ 80
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ ++ + + A + P + ++ +TD GT + NL + ++RA+
Sbjct: 81 NLRVHFAFNSGAMDAQAQQIAAQNAQFMVAHPHVQVRLEGNTDDRGTQEYNLALGEQRAE 140
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+K +L +GVS+ R IS F P+ T + N+R++
Sbjct: 141 TVKQFLQSQGVSAAR-ISTVSFGKDNPLCTTNDSACWARNRRVDFV 185
>gi|86748026|ref|YP_484522.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86571054|gb|ABD05611.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 208
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 20/199 (10%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
MI+ + L++ + + G G++ + + D + SL
Sbjct: 2 MIRQIKFSLALAAVVLVGGSGISMTAAEAGEVSSQQIRDQLKTSKTRSLSGTRAAMSPDD 61
Query: 59 QDTGIVVSRI-----GDMITCYIP---------VHVSFVSEVFLEKKFLPMLQLIATIL- 103
T VSR GD + L + P L+ + L
Sbjct: 62 LATIKRVSRTRSLSAGDREQIAAIAAKRPTIDLEINFDYNSATLSPRAEPQLKSLGDALT 121
Query: 104 -NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ ++++ + HTD+ G N +S+ RA+ +K YLI+R + G+ K
Sbjct: 122 SSDLKNSIVMLAGHTDAKGGDDYNQSLSERRAEAVKRYLIERYRIQPDNLVAVGYGEKQL 181
Query: 163 IDTNDTKVGRQNNQRIEIQ 181
+ + N+R++I
Sbjct: 182 KSSAEPLA--AENRRVQIV 198
>gi|298293019|ref|YP_003694958.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
gi|296929530|gb|ADH90339.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
Length = 344
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 50/140 (35%), Gaps = 13/140 (9%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPS---T 109
+ V +GD + L +P L +A L + PS
Sbjct: 207 AILGDRPDVRIVGDRFVFQ-SEIFFDRASADLRPDAMPALDKLAEALVALEKEIPSDISW 265
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG----VSSNRFISVRGFAYKYPIDT 165
V+ + HTD+ L S + +S + + S + + GF PID
Sbjct: 266 VLRVDGHTDNRPI-ATPLFPSNWQLSAARSIAVVQYLAGKGVSPQHLVAAGFGEYQPIDD 324
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
D+ R N+RIE+++ R
Sbjct: 325 ADSDDARARNRRIELKLTER 344
>gi|260221771|emb|CBA30668.1| hypothetical protein Csp_C24700 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 214
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 13/156 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ E + LQ + ++ I+ + V+ L +L+ +
Sbjct: 58 QQEEQRRMALEKALAIPLQSGRVTLNNGRIGIS---GSVLFAVNSDQLRADGRQLLKSLV 114
Query: 101 TILNKF---PSTVIAIQSHTDS------IGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L + ++ + TD+ +NL +S +R+ + LI+ G+ ++R
Sbjct: 115 PPLQVYLGERDEMLMVSGFTDNVAVSGANRHFADNLELSAQRSLTVTRALIEEGMPASRV 174
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ F + P+ +N + GR N+R+E+ P+G
Sbjct: 175 FAAA-FGAQQPVASNQNESGRALNRRVEMAPVPKGT 209
>gi|268590120|ref|ZP_06124341.1| outer membrane protein P5 [Providencia rettgeri DSM 1131]
gi|291314389|gb|EFE54842.1| outer membrane protein P5 [Providencia rettgeri DSM 1131]
Length = 363
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + L+ T + + TD IG+ NL +SQ+RA
Sbjct: 236 SDVLFNFNKASLKPEGQQALNELYNELSSIDPTQGRVLVVGFTDRIGSQNYNLPLSQKRA 295
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YL+ + I+ G + P+ N D GR ++R+EI+I
Sbjct: 296 QSVVDYLVSK-GVPASAIAAEGRGKEDPVTGNKCDNVKGRAALIECLAPDRRVEIEI 351
>gi|300310619|ref|YP_003774711.1| OmpA protein [Herbaspirillum seropedicae SmR1]
gi|300073404|gb|ADJ62803.1| OmpA protein [Herbaspirillum seropedicae SmR1]
Length = 190
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 16/190 (8%)
Query: 8 SMFIMTTISGCGL---------ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ ++GC + K+ + +S++ A + L
Sbjct: 1 MAALAVLLAGCAGPRERFLLLPQPDGSASSIVVKTATGETALATPYASVETAGGKVDKTL 60
Query: 59 QDTGIVVSRIGDMITCYIP------VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
V + + +P + + L L+ + FP+
Sbjct: 61 TVAPADVEKRYADVLGSLPARPRSYDLLFELGTDRLTPASQDALKKAIAEIKDFPAGEFV 120
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+ H D+IG+ NN +S RA +I+ L R I V G + P V
Sbjct: 121 LTGHADNIGSETNNDALSLRRARLIERELR-RADVKALSIEVIGKGARDPRVPQKRGVAE 179
Query: 173 QNNQRIEIQI 182
N+ +EI+I
Sbjct: 180 PRNRFVEIKI 189
>gi|149286|gb|AAA25119.1| outer membrane protein II [Klebsiella pneumoniae]
Length = 243
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + +TD IG+ N +S++RA
Sbjct: 125 SDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRIGSEAYNQQLSEKRA 184
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YL+ + IS RG P+ N D R ++R+EI++
Sbjct: 185 QSVVDYLVAK-GIPAGKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEV 240
>gi|83648072|ref|YP_436507.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
[Hahella chejuensis KCTC 2396]
gi|83636115|gb|ABC32082.1| ABC-type nitrate/sulfonate/bicarbonate transport system,
periplasmic components [Hahella chejuensis KCTC 2396]
Length = 513
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 3/146 (2%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
G + E R+ + + + L + + L+
Sbjct: 365 ATGEFAGEGSAEIARFRALAASEWERLREFGALKVRPIIFASGTSELTLEGKREVDLLME 424
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
L +P+ + I+ HT G + N +S +RA+ + Y+ GF +
Sbjct: 425 NLQHYPNFRVEIRGHTGVRGDAEANKQLSLDRAEAVYRYIEVTYEVDPNRFRFVGFGGEK 484
Query: 162 PIDTNDTKVGRQNN-Q--RIEIQIFP 184
P+ + R N + R+EI +
Sbjct: 485 PLPQLPNESLRAYNYRLPRVEIVLVS 510
>gi|294676664|ref|YP_003577279.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
1003]
gi|294475484|gb|ADE84872.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
Length = 185
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 59/189 (31%), Gaps = 16/189 (8%)
Query: 2 IKELGLSMFIMTTISG---------CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
+ L L + I G G + ++K + D + D E
Sbjct: 1 MTRLTLGGAPVVAIFGAAALALAASLGPVAAQQKAETYIPAIWIDPDGCEHWAMDDGTEG 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ G V ++ + L LQ +
Sbjct: 61 YMDARKTRDGRPVCHR-NVCGVLQTDTLFATDSTKLTASGRGYLQQ---FFTTAQARSFI 116
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTDS + + N+ +S+ RA+ + Q ++V + + P TN T G
Sbjct: 117 ITGHTDSRASDEYNMRLSKGRAEAVAGVAQQ---VGAPVLAVNWYGERMPKATNATAAGM 173
Query: 173 QNNQRIEIQ 181
N+R+E+
Sbjct: 174 AQNRRVEVI 182
>gi|15602451|ref|NP_245523.1| Plp4 [Pasteurella multocida subsp. multocida str. Pm70]
gi|12720855|gb|AAK02670.1| Plp4 [Pasteurella multocida subsp. multocida str. Pm70]
Length = 272
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 12/120 (10%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ L K ++ +AT L + + + TD +G+ NL +SQ RAD +
Sbjct: 139 DFLFDFNKDSLTAKGKEVVDSVATQLKASDAKEVKVAGFTDRLGSEAYNLKLSQRRADRV 198
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN------NQRIEI----QIFPRGN 187
K+ LI++GV++N I G+ + D G N+R+EI + +G+
Sbjct: 199 KARLIEQGVAAN--IHAVGYGKAQQVKACDDVQGAALRDCLRPNRRVEITASGTVLKQGS 256
>gi|256829772|ref|YP_003158500.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256578948|gb|ACU90084.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 300
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 65/162 (40%), Gaps = 13/162 (8%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+ + + + K L + ++E + D G+ + + +
Sbjct: 101 AEGKSQEEILKEAMAKMIEERLKEYKEELIIDTFDNGVRIQ-----MLYGEGNPFFDSAS 155
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG-----TLKNNLLISQERADVIKSY 140
L +L++IA + P+ IA++ HTD++ + N +S +RA +
Sbjct: 156 SQLTGDARNVLKVIADTVRDLPN-QIAVEGHTDAVPLGGPSSRYTNWELSTDRASSARVI 214
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L + G+ R + V G+A P+ + + R N+R+ I +
Sbjct: 215 LEEFGLDPKRMVRVAGYAATQPLIRENPEDPR--NRRVSILL 254
>gi|126736793|ref|ZP_01752530.1| OmpA/MotB [Roseobacter sp. CCS2]
gi|126713694|gb|EBA10568.1| OmpA/MotB [Roseobacter sp. CCS2]
Length = 162
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 58/154 (37%), Gaps = 6/154 (3%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ D + + + + F+ +L + D ++ L+++
Sbjct: 6 SQAEGDARRAALVAEMARYDVGFEGELMGDMLGEMDENDRLSTTFR---FRTGSSKLDER 62
Query: 92 FLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV--SS 148
+Q + L + P T + TD +G N ++++RA + + +
Sbjct: 63 GRLDMQRLIAYLQRVPDGTEVTFVGFTDDVGAFDANQRLAEQRAAAVMEEMRAITGGSIN 122
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S G+ P N ++ GR N+R+E+ I
Sbjct: 123 NVTMSTAGYGEIAPSACNISERGRGINRRVEVWI 156
>gi|227498859|ref|ZP_03928999.1| predicted protein [Acidaminococcus sp. D21]
gi|226904311|gb|EEH90229.1| predicted protein [Acidaminococcus sp. D21]
Length = 354
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + + + P + + +TDS + N +S+ R D
Sbjct: 247 LDSIHFASDDDQPLPSERDKMDHLVQVAKDHPDSTFKLVGNTDSDASDAYNEDLSKRRVD 306
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + S+ + + K P+ +N T+ G+ +N+R+++
Sbjct: 307 HVAQ-YVSNNGVSSDRLKLNYKGEKDPVASNATEQGKADNRRVDVW 351
>gi|90578362|ref|ZP_01234173.1| ABC-type nitrate/sulfonate/bicarbonate transport system,
periplasmic components [Vibrio angustum S14]
gi|90441448|gb|EAS66628.1| ABC-type nitrate/sulfonate/bicarbonate transport system,
periplasmic components [Vibrio angustum S14]
Length = 508
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 3/116 (2%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T + L L L A L+ +P+ I ++ HT G N+ +S +
Sbjct: 391 TLKTRPVIFSSGSERLTPNGQQQLNLTAESLSHYPNFRILVEGHTGLRGDKALNIELSAK 450
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ-NNQ--RIEIQIFPR 185
RA +KSYL+ + I G P+ + R+ N+ R+EI +
Sbjct: 451 RAKAVKSYLVNQLGFEASRIHAVGKGSDEPLIQLSGESQRRYANRLMRVEIALMSE 506
>gi|190571199|ref|YP_001975557.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|213018599|ref|ZP_03334407.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|190357471|emb|CAQ54905.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|212995550|gb|EEB56190.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
Length = 159
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 42/129 (32%), Gaps = 9/129 (6%)
Query: 61 TGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G+ + + + I E + + L + +L P + + HTD
Sbjct: 24 KGVNTTNKMNAVVKQIGDKRVFFGYDESSISEVSADALLDVMEVLQNNPDAKVTLTGHTD 83
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-------KVG 171
+ G+ + NL + RAD K +++ I P+ +
Sbjct: 84 NRGSHEYNLALGARRADAAKKFMVSCTPYLENRIKTASKGETEPLVNVKDDSRNSKYEKE 143
Query: 172 RQNNQRIEI 180
N+R+E
Sbjct: 144 HAKNRRVEF 152
>gi|90579158|ref|ZP_01234968.1| Putative sodium-type flagellar protein MotY [Vibrio angustum S14]
gi|90439991|gb|EAS65172.1| Putative sodium-type flagellar protein MotY [Vibrio angustum S14]
Length = 297
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
V + L K L IA + ++ + + DSI + +S+
Sbjct: 183 IAFSVLHYSENSDTLNKISQQRLAQIADFVRYSDDIDLVLVAAFNDSIAGTTESQEMSER 242
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ ++ Y G+ + R + V + + PI N T +GR N+R+ I +
Sbjct: 243 RAEKLRQYFQSLGLPAER-VQVEAYGKRRPIADNSTPMGRNLNRRVVISL 291
>gi|134295071|ref|YP_001118806.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
gi|134138228|gb|ABO53971.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
Length = 223
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + + V+ +TD IG+ K N +S RA +
Sbjct: 99 DALFDFDKATLKPLGKQKLDELASKIEGMNTEVVVATGYTDRIGSDKYNDRLSLRRAQAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIFPRGNIKK 190
KSYL+ + I G + P+ T + R ++R+E+++ ++K
Sbjct: 159 KSYLVSK-GIPANKIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTQQVQK 217
>gi|167586522|ref|ZP_02378910.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu]
Length = 223
Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 8/120 (6%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + + V+ +TD IG+ K N +S RA +
Sbjct: 99 DALFDFDKATLKPLGKQKLDDLAGKIQGMNTEVVVATGYTDRIGSDKYNDRLSLRRAQAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIFPRGNIKK 190
KSYL+ + I G + P+ T + R ++R+E+++ ++K
Sbjct: 159 KSYLVSK-GIPANKIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTQEVQK 217
>gi|327404032|ref|YP_004344870.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327319540|gb|AEA44032.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 734
Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ +++ + L I I+N+FP+ VI + SHTD GT NL +SQ+R
Sbjct: 614 IDLKPIYFDLAKYDIRPDAAVELDKIVAIMNEFPTMVIELGSHTDCRGTALKNLELSQKR 673
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND----------TKVGRQNNQRIEIQIF 183
AD +Y+ + R I+ +G+ ++ T+ N+R E +
Sbjct: 674 ADASANYIKSKIKDPYR-IAGKGYGETKILNGCSCEGPKKQPKYTEAQHSVNRRTEFLVV 732
>gi|270047795|pdb|3KHN|A Chain A, Crystal Structure Of Putative Motb Like Protein Dvu_2228
From Desulfovibrio Vulgaris.
gi|270047796|pdb|3KHN|B Chain B, Crystal Structure Of Putative Motb Like Protein Dvu_2228
From Desulfovibrio Vulgaris
Length = 174
Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 7/129 (5%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ I +IT +P V F L +L + + + I I+ TD
Sbjct: 33 EGVIGAVFDEGVITLRVPSEVLFAPGAVELAPGADRVLATLKDLFIRRREQNINIKGFTD 92
Query: 119 SIGTLKN-----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ N N +S R+ + Y + ++ G P+ N + R
Sbjct: 93 DVQPSANARFKDNWEVSALRSVNVLRYFLGA-GIEPARLTATGLGELDPLFPNTSDENRA 151
Query: 174 NNQRIEIQI 182
N+R+E +
Sbjct: 152 RNRRVEFVL 160
>gi|271962882|ref|YP_003337078.1| Outer membrane protein and related peptidoglycan- associated
(lipo)protein-like protein [Streptosporangium roseum DSM
43021]
gi|270506057|gb|ACZ84335.1| Outer membrane protein and related peptidoglycan- associated
(lipo)protein-like protein [Streptosporangium roseum DSM
43021]
Length = 535
Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 1/117 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ D + G+ + + V F + L + +L A +++ I ++
Sbjct: 242 SESPDRSEETTDDGEDLHVNLSSDVLFALNRADLTPRSRAVLTRTAKLIDTSEGATITVE 301
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
H DS GT N +SQ RA ++ L + +G+ + P+ N+ + G
Sbjct: 302 GHADSSGTDAINDPLSQRRAQAVQRALSGLLTRTGVRFQAKGYGSRRPLYGNEDEEG 358
>gi|209964175|ref|YP_002297090.1| OmpA family protein (probable proton motor MotY) [Rhodospirillum
centenum SW]
gi|209957641|gb|ACI98277.1| OmpA family protein (probable proton motor MotY) [Rhodospirillum
centenum SW]
Length = 356
Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 2/106 (1%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L +L+ +A + + H D+ G N +S RA+ ++
Sbjct: 253 VFFDWDRSDLTADARQVLRSVAGDARSGNIFAVQVTGHADTSGPADYNQRLSIRRAEAVR 312
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+LI + I++ G P+ V +N+R + IFP
Sbjct: 313 DFLITQ-GIPADQIAIEGRGETDPLVPTADGVREPSNRR-SVIIFP 356
>gi|153947861|ref|YP_001401507.1| outer membrane protein A [Yersinia pseudotuberculosis IP 31758]
gi|152959356|gb|ABS46817.1| outer membrane protein A [Yersinia pseudotuberculosis IP 31758]
Length = 357
Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 49/144 (34%), Gaps = 12/144 (8%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--P 107
ED + T + + ++ L+ + L + L+
Sbjct: 203 QEDAAAPIVAPTPAPAPIVDTKRFTLKSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPK 262
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ + D IG NL +SQ RAD ++ YL+ + I+ RG P+ N
Sbjct: 263 DGSVVVLGFADRIGQPAPNLALSQRRADSVRDYLVSK-GIPADKITARGEGQANPVTGNT 321
Query: 168 TK---------VGRQNNQRIEIQI 182
++R+EI++
Sbjct: 322 CDNVKPRAALIECLAPDRRVEIEV 345
>gi|170726476|ref|YP_001760502.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169811823|gb|ACA86407.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 238
Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 66/185 (35%), Gaps = 11/185 (5%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-----RFGSSLDKAEDEFQMQLQDTG 62
++ T + G + + ++ + + + D+A+ +
Sbjct: 54 AIIGAFTGALLGKSVGDDSEIDAQHAKIAALSSDKQSLLVIADQYDEAQQQLAELKLAQD 113
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
++ + + L L +A + P + + + D G
Sbjct: 114 QKLTELAMGLNIQ-----FKTGSSELAPHIKRQLDDLAYAITISPELRLDMTGYADRRGD 168
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S++R +KSYL+ +GV +R +S + F P+ + + ++R+ I++
Sbjct: 169 STYNQALSEQRVAEVKSYLVSQGVDESR-LSYKAFGASAPLTEDQSFENDFFDRRVNIKL 227
Query: 183 FPRGN 187
G+
Sbjct: 228 ISNGS 232
>gi|313672698|ref|YP_004050809.1| ompa/motb domain protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312939454|gb|ADR18646.1| OmpA/MotB domain protein [Calditerrivibrio nitroreducens DSM 19672]
Length = 276
Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 66/165 (40%), Gaps = 8/165 (4%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP--VHVS 81
EK +V + + + K S + + + + + G I +
Sbjct: 96 EKIEVEIAATATENNGEKVKESLMGVVKTQLSEFSDQIMVSTTPEGIRIDVIDKTGNPIF 155
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI---GTLKNNLLISQERADVIK 138
L +L+++A LN+ + I I+ HTD++ G N +S +RA+ +
Sbjct: 156 SSGSASLNTNGKAVLKVLANTLNELSN-KIVIEGHTDAMTYRGDKNGNWDLSIQRANNAR 214
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ L+ G +N+ SV G+A PI ++ N+RI I
Sbjct: 215 AELLLNGYDANKISSVAGYAATRPIVKDNP--NDPMNRRISFLIL 257
>gi|162146328|ref|YP_001600787.1| hypothetical protein GDI_0503 [Gluconacetobacter diazotrophicus PAl
5]
gi|161784903|emb|CAP54446.1| putative outer membrane protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 326
Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 13/155 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ + + LQ+ V +GD + L K + ++ +A
Sbjct: 175 EQLQRYRSEFFGRLRDILQNQD-GVQVVGDRFVFQ-SEVLFPPGGAELSPKGIADIRALA 232
Query: 101 TILNKFPS-------TVIAIQSHTDSIGTL---KNNLLISQERADVIKSYLIQRGVSSNR 150
++ + ++ + H D +N +S RA + LI S
Sbjct: 233 RTFHQVSAQIPASIPWILRVDGHADRQPIHSAFASNWELSSARAITVVKLLIAE-GISPH 291
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ GFA P+DT++T N+RIE ++ R
Sbjct: 292 HLAATGFADFQPLDTHETPAAFARNRRIEFRLTDR 326
>gi|116624960|ref|YP_827116.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116228122|gb|ABJ86831.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 276
Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 72/205 (35%), Gaps = 27/205 (13%)
Query: 1 MIKELGLSMFIMTT-------ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
M+ L + +++M+ IS S T + + K ++
Sbjct: 47 MM-ALFIVLWLMSADEKVKEAISAFFNNPTGPGTQIGTDSAGTGNAIEVPKEDMSKLREK 105
Query: 54 FQMQLQ--------DTGIVVSRIGDMITCYI---PVHVSFVSEVFL-EKKFLPMLQLIAT 101
+ L+ + ++ D + + + F S L +L+ +A
Sbjct: 106 IEQALKTVPNFRDLKDHVEMTITSDGLRIELLETEAGMFFESGRPLPTSTGSELLKRLAE 165
Query: 102 ILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
L K P+ + I+ HTDS N +S +RA+ + + V + VRGF
Sbjct: 166 ELGKMPN-HLLIEGHTDSKPFSGDGTYTNWELSSDRANAARRLMESNAVRHEQVAQVRGF 224
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
+ D + +N+R+ + +
Sbjct: 225 GDRQLRHPEDPE--HASNRRVSVIV 247
>gi|254504256|ref|ZP_05116407.1| OmpA family protein [Labrenzia alexandrii DFL-11]
gi|222440327|gb|EEE47006.1| OmpA family protein [Labrenzia alexandrii DFL-11]
Length = 471
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 67/175 (38%), Gaps = 11/175 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
LA+ + ++ ++ + LD AE I V R D +
Sbjct: 299 SLAAEAEGGATEAETVPGALLVAELTTVLDAAEGTLLENTA-AQITVVRQDDGALISLTD 357
Query: 79 H----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQ 131
+ + + + +L+ + +++K I I HTD+ +N +S
Sbjct: 358 DQNFGMFAIGSAEPRPELVSLLERLGKVISKT-GAQIVITGHTDARPFKSKTYDNWRLSS 416
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
RA + L + GV ++RF+ + G A ++ + D +N+R+EI +
Sbjct: 417 ARAHMALYMLSRGGVGADRFVRIEGAADRHLKNAEDPFA--ASNRRVEIYLLEEA 469
>gi|259090555|gb|ACV91900.1| OprL [Pseudomonas fluorescens]
gi|259090583|gb|ACV91914.1| OprL [Pseudomonas fluorescens]
gi|309244355|gb|ADO52182.1| OprL [Pseudomonas poae]
gi|309244357|gb|ADO52183.1| OprL [Pseudomonas poae]
gi|309244359|gb|ADO52184.1| OprL [Pseudomonas trivialis]
gi|309244361|gb|ADO52185.1| OprL [Pseudomonas trivialis]
gi|309244363|gb|ADO52186.1| OprL [Pseudomonas trivialis]
gi|309244365|gb|ADO52187.1| OprL [Pseudomonas trivialis]
gi|309244367|gb|ADO52188.1| OprL [Pseudomonas trivialis]
gi|309244369|gb|ADO52189.1| OprL [Pseudomonas trivialis]
gi|309244371|gb|ADO52190.1| OprL [Pseudomonas sp. 'ribotype C P501-02']
gi|309244373|gb|ADO52191.1| OprL [Pseudomonas sp. 'ribotype C P515-18']
gi|309244375|gb|ADO52192.1| OprL [Pseudomonas sp. 'ribotype C P527-22']
Length = 157
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 52/176 (29%), Gaps = 24/176 (13%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKK-KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K + ++ GC + + N N E +
Sbjct: 3 MLKFGKFAALALALSVAVGCSSKGGDNAGEGAAVDPNAGYGANTGAVDGSLSEEAALRA- 61
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
I L+ + + L + A L + ++ +T
Sbjct: 62 ------------------ITTFYFEYDSSDLKPEAMRALDVHAKDLKAN-GARVVLEGNT 102
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
D GT + N+ + + RA ++ YL+ + + + + + + P+ T
Sbjct: 103 DERGTREYNMALGERRAKAVQRYLVLQ-GVAPGQLELVSYGKERPVATGHDXQSWA 157
>gi|153831565|ref|ZP_01984232.1| OmpA family protein [Vibrio harveyi HY01]
gi|148872075|gb|EDL70892.1| OmpA family protein [Vibrio harveyi HY01]
Length = 297
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 2/120 (1%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
D + L+ + L L L I + HTD IG+L N +
Sbjct: 180 DRKIYMAMTPHFDFDKSQLKPEDLAKLDSFTDKLQGLQG-SILVAGHTDQIGSLSYNEKL 238
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+Q RA + YL + S V+ F P +K N+R +F G+I+
Sbjct: 239 AQRRASEVVKYLKTKIDPSQFLWEVKSFGELQPAIDERSKEANALNRRA-FIVFKEGSIE 297
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 60/179 (33%), Gaps = 25/179 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K L + ++GC + ++ N+ + LD ++ L
Sbjct: 1 MKTTLRLLGGVVGTLLVAGCATDTYVSQE------------NRDKFTDLDVSKFLISECL 48
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I + H +F + + L + I I HTD
Sbjct: 49 APE--------REIHIAVVEHFAF-DKYNIRDVDATSLNAFVHEIEGLSG-RITIVGHTD 98
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+L+ N +S RA ++S+L ++ + V+ F P+ T R N+R
Sbjct: 99 YKGSLEYNEALSLRRAQSVESFLKEKLDPDHYDWEVKYFGETQPLALGKTDEDRAENRR 157
>gi|22126613|ref|NP_670036.1| outer membrane protein A [Yersinia pestis KIM 10]
gi|45441153|ref|NP_992692.1| outer membrane protein A [Yersinia pestis biovar Microtus str.
91001]
gi|21959622|gb|AAM86287.1|AE013876_5 outer membrane porin A [Yersinia pestis KIM 10]
gi|45436013|gb|AAS61569.1| putative outer membrane porin A protein [Yersinia pestis biovar
Microtus str. 91001]
Length = 363
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 49/144 (34%), Gaps = 12/144 (8%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--P 107
ED + T + + ++ L+ + L + L+
Sbjct: 209 QEDAAAPIVAPTPAPAPIVDTKRFTLKSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPK 268
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ + D IG NL +SQ RAD ++ YL+ + I+ RG P+ N
Sbjct: 269 DGSVVVLGFADRIGQPAPNLALSQRRADSVRDYLVSK-GIPADKITARGEGQANPVTGNT 327
Query: 168 TK---------VGRQNNQRIEIQI 182
++R+EI++
Sbjct: 328 CDNVKPRAALIECLAPDRRVEIEV 351
>gi|126729097|ref|ZP_01744911.1| OmpA family protein [Sagittula stellata E-37]
gi|126710087|gb|EBA09139.1| OmpA family protein [Sagittula stellata E-37]
Length = 227
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + L++ + L+ A + +FP + H D +G N + RA+
Sbjct: 78 MTTVNFAFNSAQLDQGAIDTLREQARWIRQFPEVRFRVYGHADKVGNQAYNKSLGLRRAN 137
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ +YL+ +G+S +R +V F P+ T+ + N+R
Sbjct: 138 AVVNYLVSQGISRSRLEAVVSFGETQPLIV--TEGRERRNRR 177
>gi|218511064|ref|ZP_03508942.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5]
Length = 106
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ K PMLQ + +++ + +I I HTD+ G + N +S RA + +
Sbjct: 7 FDSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDASGGARYNQNLSMLRAREVARFFT 66
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + G ++P+D K N+R+E Q
Sbjct: 67 EDCHIPPERLEAVGVGEQFPLDPQKPKAD--ENRRVEFQ 103
>gi|163787730|ref|ZP_02182177.1| hypothetical protein FBALC1_04287 [Flavobacteriales bacterium
ALC-1]
gi|159877618|gb|EDP71675.1| hypothetical protein FBALC1_04287 [Flavobacteriales bacterium
ALC-1]
Length = 366
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L ++ + I I SHTDS G N +SQ+RA+ + +
Sbjct: 257 YYELGSARLTPASKKVIDERLLTILNDKPVNIEIMSHTDSRGNDDFNQSLSQQRANSVVN 316
Query: 140 YLIQRGVSSNRFISVRGFAYKYP--IDTND---TKVGRQNNQRIEIQIFPR 185
YL+ +G+S +R +S +G+ TN ++ Q N+R E ++
Sbjct: 317 YLVSKGISRSR-LSAKGYGETRLTNRCTNGADCSETQHQRNRRTEFRVLSN 366
>gi|94499424|ref|ZP_01305961.1| OmpA family protein [Oceanobacter sp. RED65]
gi|94428178|gb|EAT13151.1| OmpA family protein [Oceanobacter sp. RED65]
Length = 465
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/169 (13%), Positives = 55/169 (32%), Gaps = 10/169 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED---EFQMQLQDTGIVVSRIGDMIT 73
G + + + V G E +L + + + ++
Sbjct: 303 GASKNKYVNEFLAFAEGIQGQRVVNAEGYISQNVEAMDVALPDELPQDYLAMVKNAKRLS 362
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
L+ K L +Q +A + + P + + D + + L+S+ R
Sbjct: 363 INFR---FKEGSAKLDNKALKDIQRLAYYMTEHPQQELVLIGFGDRRKNKERSKLLSKLR 419
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A ++ L + G+ + G+ P+ + N+R+E+ +
Sbjct: 420 AMAVRRELSRLGIYPD---EAEGYGEYNPVAAFEQSAA-TKNRRVEVWL 464
>gi|46580633|ref|YP_011441.1| motB protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120602060|ref|YP_966460.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|46450052|gb|AAS96701.1| motB protein, putative [Desulfovibrio vulgaris str. Hildenborough]
gi|120562289|gb|ABM28033.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
gi|311234364|gb|ADP87218.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
Length = 244
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 7/129 (5%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ I +IT +P V F L +L + + + I I+ TD
Sbjct: 111 EGVIGAVFDEGVITLRVPSEVLFAPGAVELAPGADRVLATLKDLFIRRREQNINIKGFTD 170
Query: 119 SIGTLKN-----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ N N +S R+ + Y + ++ G P+ N + R
Sbjct: 171 DVQPSANARFKDNWEVSALRSVNVLRYFLGA-GIEPARLTATGLGELDPLFPNTSDENRA 229
Query: 174 NNQRIEIQI 182
N+R+E +
Sbjct: 230 RNRRVEFVL 238
>gi|281421188|ref|ZP_06252187.1| OmpA family protein [Prevotella copri DSM 18205]
gi|281404723|gb|EFB35403.1| OmpA family protein [Prevotella copri DSM 18205]
Length = 660
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + L + T+L + P I + +H D G + N +SQ R
Sbjct: 518 VLIDNIFYDFDKATLTEASTTALDQLVTLLKENPHVTIELSAHCDYKGNSEYNKHLSQRR 577
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPID---------------TNDTKV-------- 170
A + YLI + ++ G+ + P + ++
Sbjct: 578 AQSVVDYLI-KHGIEKERLTPVGYGKEKPKNVRKKLTEKYPWLKEGDVLSEEFILKQSKE 636
Query: 171 ----GRQNNQRIEIQIF 183
Q N+R E ++
Sbjct: 637 HQAICNQLNRRTEFKVL 653
>gi|149371333|ref|ZP_01890819.1| outer membrane protein A [unidentified eubacterium SCB49]
gi|149355471|gb|EDM44030.1| outer membrane protein A [unidentified eubacterium SCB49]
Length = 560
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 7/108 (6%)
Query: 84 SEVFLEKKFLPMLQ-LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + ++ + +L + P + I SHTDS G N +S+ RA + YL
Sbjct: 454 GSATLTAQAKNIIDTRLMPVLAQNPGVKLEIASHTDSRGGKAANQDLSERRAQAVAVYLQ 513
Query: 143 QRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
+ +N + GF ++ T+ N+R E ++
Sbjct: 514 SK-GINNSLLVANGFGETRLLNRCADGVSCTEKEHAANRRTEFRLINN 560
>gi|78065624|ref|YP_368393.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77966369|gb|ABB07749.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 222
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + + V+ +TD IG+ K N +S RA +
Sbjct: 98 DALFDFDKATLKPLGKQKLDELASKIEGMNTEVVVATGYTDRIGSDKYNDRLSLRRAQAV 157
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIFPRGNIKK 190
KSYL+ + I G + P+ T + R ++R+E+++ ++K
Sbjct: 158 KSYLVSK-GVPANKIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTQEVQK 216
>gi|312114121|ref|YP_004011717.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
gi|311219250|gb|ADP70618.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
Length = 509
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 5/146 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D R + AE +F L + G ++ + L+ K + +
Sbjct: 365 DQQAGRVWPAFLVAEKDFSFALMRDLTADVKSGKRLSVNFR---FHRNSAVLDDKAMQDV 421
Query: 97 QLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+A L + + + TD G + N +S RA K+ + I+V+
Sbjct: 422 PRLARFLKSDANGKDLLLLGFTDGTGAFETNKALSLNRATSFKN-ALVAEGVPANKITVK 480
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G+ P+ N + G+ N+R+E+
Sbjct: 481 GYGSLLPVGCNTSDAGQSANRRVEVW 506
>gi|292491142|ref|YP_003526581.1| hypothetical protein Nhal_1021 [Nitrosococcus halophilus Nc4]
gi|291579737|gb|ADE14194.1| conserved hypothetical protein [Nitrosococcus halophilus Nc4]
Length = 237
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/204 (12%), Positives = 65/204 (31%), Gaps = 24/204 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ +F+ I+ A E+ ++ + + + + + E + + +
Sbjct: 29 LMIVFMFIAIALMRNAFLERDRIKEIAVAYQENQVAIYEALMKEFEKDLER----WDARI 84
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI----LNKFPST--VIAIQSHTDS 119
P + + ++F +L L + + I I+ HT S
Sbjct: 85 DSDTLAFEFQSPEVLFATGSTEIRQRFKEILADFFPRYLVILKHYKDSIDEIRIEGHTSS 144
Query: 120 IGT--------LKNNLLISQERADVIKSYLIQRG------VSSNRFISVRGFAYKYPIDT 165
+ N+L+SQ R + Y+ + R + GF+ +
Sbjct: 145 VWNNQVSETEAYFLNMLLSQGRTRSVLHYVYELPKVESDRGWVKRHFAAVGFSSSRLVLD 204
Query: 166 NDTKVGRQNNQRIEIQIFPRGNIK 189
+ R ++R+ ++ ++
Sbjct: 205 DQGNEDRARSRRVSFRVITNAEMQ 228
>gi|223041650|ref|ZP_03611847.1| hypothetical protein AM202_0258 [Actinobacillus minor 202]
gi|223017514|gb|EEF15928.1| hypothetical protein AM202_0258 [Actinobacillus minor 202]
Length = 162
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 59/190 (31%), Gaps = 39/190 (20%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M+K +L + + + GC ++ V
Sbjct: 1 MMKLLKLATTSALAALLVGCAQSNNLDAPAPAVAPVKEAPVTAPAKE------------- 47
Query: 59 QDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ F + L K L IA + + + + +T
Sbjct: 48 ---------------FTLSGDFLFDFDKSVLSAKGKSTLNGIAKEIKDTGAKNVTVTGYT 92
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN--- 174
D +G+ N +SQ RA+ K+YL +GVS+N I G + + G+
Sbjct: 93 DRLGSATYNQKLSQARANTTKAYLQSQGVSAN--IKAVGRGAANQVKACKGETGQALKDC 150
Query: 175 ---NQRIEIQ 181
N+R+ I
Sbjct: 151 LKPNRRVHII 160
>gi|326402347|ref|YP_004282428.1| putative outer membrane protein [Acidiphilium multivorum AIU301]
gi|325049208|dbj|BAJ79546.1| putative outer membrane protein [Acidiphilium multivorum AIU301]
Length = 361
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L + ++ A T + + +TD+ G N+ +S RA +
Sbjct: 258 VFFNWDKANLTPRAQQIVSEAAKASQTTKVTRLNVNGYTDTSGAPAYNMKLSLRRAHNVA 317
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L+ S I ++G+ + + V N+R+EI +
Sbjct: 318 AQLVA-DGVSKNDIVIKGYGETHLLVPTGPNVREPQNRRVEIIL 360
>gi|148259194|ref|YP_001233321.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|146400875|gb|ABQ29402.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
Length = 361
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L + ++ A T + + +TD+ G N+ +S RA +
Sbjct: 258 VFFNWDKANLTPRAQQIVSEAAKASQTTKVTRLNVNGYTDTSGAPAYNMKLSLRRAHNVA 317
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L+ S I ++G+ + + V N+R+EI +
Sbjct: 318 AQLVA-DGVSKNDIVIKGYGETHLLVPTGPNVREPQNRRVEIIL 360
>gi|148259193|ref|YP_001233320.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|326402346|ref|YP_004282427.1| putative outer membrane protein [Acidiphilium multivorum AIU301]
gi|146400874|gb|ABQ29401.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
gi|325049207|dbj|BAJ79545.1| putative outer membrane protein [Acidiphilium multivorum AIU301]
Length = 364
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L + ++ A T + + +TD+ G N+ +S RA +
Sbjct: 261 VFFNWDKANLTPRAQQIVSEAAKASQTTKVTRLNVNGYTDTSGAPAYNMKLSLRRAHNVA 320
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L+ S I ++G+ + + V N+R+EI +
Sbjct: 321 AQLVA-DGVSKNDIVIKGYGETHLLVPTGPNVREPQNRRVEIIL 363
>gi|206603227|gb|EDZ39707.1| Putative outer membrane protein, OmpA/MotB family [Leptospirillum
sp. Group II '5-way CG']
Length = 179
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 54/176 (30%), Gaps = 19/176 (10%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + + GC + + ++ + +
Sbjct: 10 VSILFAGILVTGGCASTN-------------GAGAGTQSNTTESAPAPAPAPAPEASNAS 56
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
++ + + F + L + +L+ A ILN P+ + I H D GT
Sbjct: 57 STQSDIESSLSRDITYGF-DKSVLTSEDRRILKKDAAILNANPTVHVVIAGHADERGTDT 115
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK----YPIDTNDTKVGRQNNQ 176
N+++ Q+RA + I + + + Y + ++ + N+
Sbjct: 116 YNIVLGQKRAKAAM-MYLVNLGIKKNRIKIVSYGKRTIPGYDLCSDHNEQCWSKNR 170
>gi|319902507|ref|YP_004162235.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
gi|319417538|gb|ADV44649.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
Length = 223
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 76/219 (34%), Gaps = 34/219 (15%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD------------- 48
+K L + + C + K + + G
Sbjct: 3 MKITALLLCGTILLGSCSTMNNTTKGGVIGGGSGAAAGAIIGGLIGKGKGAAIGAAIGAA 62
Query: 49 -----------KAEDEFQMQLQDTGIVVSRIGDM-----ITCYIPVHVSF-VSEVFLEKK 91
K + + + G V +I D + + F + L
Sbjct: 63 VGTGAGAAIGHKMDKKAAEAAKIEGAQVEQITDSNGLPAVKVSFAAGILFGFNSAALSND 122
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L+ +A IL +T IAI HTD +GT + N+ +S+ RA +++YL GVS +F
Sbjct: 123 AKASLRDLAQILKDDSTTDIAIIGHTDKVGTYEANMKVSKNRAYSVENYLQDCGVSPAQF 182
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
V G Y D + T N+R+E+ ++ + K
Sbjct: 183 KKVEGVGYAQ-YDESKTAD---QNRRVEVYMYASEQMIK 217
>gi|188534230|ref|YP_001908027.1| outer membrane protein A [Erwinia tasmaniensis Et1/99]
gi|188029272|emb|CAO97149.1| Outer membrane protein A [Erwinia tasmaniensis Et1/99]
Length = 355
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + +TD IG+ + N +S++RA
Sbjct: 228 SDVLFTFNKASLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRIGSEQYNQKLSEKRA 287
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN---------NQRIEIQI 182
+ YL+ + + IS RG P+ N + ++R+EI++
Sbjct: 288 QSVVDYLVSK-GIPSSKISARGEGKSNPVTGNTCDSVKARKALIDCLGPDRRVEIEV 343
>gi|293390286|ref|ZP_06634620.1| OmpA-like outer membrane protein [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290950820|gb|EFE00939.1| OmpA-like outer membrane protein [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 346
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I + + + + + +TD IG+ N +SQ RA+
Sbjct: 229 SDVTFAFGKANLKPQAQNTLDGIYGEIAQVNNANVQVAGYTDRIGSDAYNQKLSQRRAET 288
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +YL+ + S + IS G P+ D GR +++R+EI +
Sbjct: 289 VANYLVSK-GVSQQAISATGHGKANPVTGSKCDAVKGRKALIACLADDRRVEIAV 342
>gi|262066274|ref|ZP_06025886.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
33693]
gi|291380021|gb|EFE87539.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
33693]
Length = 75
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 49/75 (65%)
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ ++ HTDSIG+ + N+ +S+ RA+ +K+ LI+ G++ R + + +YP+ TN+T
Sbjct: 1 VTLEGHTDSIGSNQYNIGLSRRRAEAVKAKLIEFGLAEERIVGIEAKGEEYPVATNETPE 60
Query: 171 GRQNNQRIEIQIFPR 185
GR N+R+E ++ R
Sbjct: 61 GRLQNRRVEFRLVQR 75
>gi|148368|gb|AAA24807.1| outer membrane protein II [Enterobacter aerogenes]
Length = 238
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + TD IG+ N +S++RA
Sbjct: 120 SDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 179
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + IS RG P+ T D R ++R+EI++
Sbjct: 180 QSVVDYLVSK-GIPANKISPRGMGESNPVTGSTCDNVKPRAALIDCLAPDRRVEIEV 235
>gi|71906332|ref|YP_283919.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71845953|gb|AAZ45449.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 184
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/181 (12%), Positives = 59/181 (32%), Gaps = 7/181 (3%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+++ + + GC ++ + +V + L ++ +D
Sbjct: 10 TLVAIILTLFLGGCSTEIGLS-ELPKQEEPLASVVQNGHQAPLPRSTGARIEMHRD---- 64
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + L L++IA L + + + + + G+
Sbjct: 65 -ETEEAPVIAEENAVFFTLGSAALSHSGTQKLEIIAERLIADRTLHVLLVGYANDNGSSS 123
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
NL +S R + ++L + I V+ + + + RQ +R+++ I
Sbjct: 124 FNLAVSDNRLATVAAFLR-KRGVHGEQIRVQALGSEKNLSNCRSSKCRQKFRRVDLVIRN 182
Query: 185 R 185
+
Sbjct: 183 K 183
>gi|332520207|ref|ZP_08396671.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332044766|gb|EGI80960.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 648
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I + + + ++ + L+ I +N + + I ++SHTDS T + NL +S
Sbjct: 532 LLGINIIYFDLDKHYIRQDAEVELRKIIDFMNVYSNIKIDVRSHTDSRNTSEYNLDLSNR 591
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
RA YL+ G + ++ +G+ + ++ Q N+R E I
Sbjct: 592 RAQATIDYLVNVGGINRARLTGKGYGELQLRNRCGDGVPCSESEHQLNRRSEFIIV 647
>gi|239834431|ref|ZP_04682759.1| Protein mbhA [Ochrobactrum intermedium LMG 3301]
gi|239822494|gb|EEQ94063.1| Protein mbhA [Ochrobactrum intermedium LMG 3301]
Length = 379
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 70/164 (42%), Gaps = 11/164 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+E+ L K+ + + + + + + + D G+++ I +
Sbjct: 220 KQEQLIADLKKAAEGETAKEGTAAKKAEPMPDVTVVPVDGGVMIQLTD-----KIDYGMF 274
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERADVIK 138
+ + + + ML+ IA ++++ P + I HTD+ +N +S RA +
Sbjct: 275 TIGSAKPDARVVQMLERIAQVISRQPG-EVIISGHTDARPFKSATYDNWRLSSARAQMAY 333
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L++ G+ R + V G+A + P + ND N+RI+I +
Sbjct: 334 YMLVRGGLDEKRVLRVEGYADRQPKNANDPNA--AENRRIDIFL 375
>gi|85710327|ref|ZP_01041392.1| ompA family protein [Erythrobacter sp. NAP1]
gi|85689037|gb|EAQ29041.1| ompA family protein [Erythrobacter sp. NAP1]
Length = 320
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L ++ L A + ++ + +TDS G+ + N +S+ RA +
Sbjct: 198 NVYFDTGRHNLSQQARAELCNAAAQAEATDNALLLVVGYTDSTGSQEVNQRLSERRAGSV 257
Query: 138 KSYLIQRGVS-SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++L Q+ R +S G A P N T G+ N+R+ + +
Sbjct: 258 VNFLQQQCGWKPWRMLSPTGMAEADPAADNTTAYGKAQNRRVAVNVL 304
>gi|313892856|ref|ZP_07826435.1| OmpA family protein [Veillonella sp. oral taxon 158 str. F0412]
gi|313442610|gb|EFR61023.1| OmpA family protein [Veillonella sp. oral taxon 158 str. F0412]
Length = 341
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + P L +++ + + + D+ + N+ +S+ R
Sbjct: 234 VQSIYFDSDQDVARADQYPNLTAAVNAAHQYSQDQVKLLGNADTDANPQYNIGLSERRVQ 293
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ YL+ GVS++RFI + P+ TN T G+ N+R+++ I
Sbjct: 294 YVAQYLVNNGVSADRFIGIA-NGDTKPVATNSTAAGKAENRRVDVYI 339
>gi|251788834|ref|YP_003003555.1| outer membrane protein A [Dickeya zeae Ech1591]
gi|247537455|gb|ACT06076.1| OmpA domain protein transmembrane region-containing protein
[Dickeya zeae Ech1591]
Length = 355
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD +G+ + N +S +RA
Sbjct: 228 SDVLFNFNKATLKPEGQRSLDQLYSQLSSLDPKDGSVVVLGFTDRLGSDQYNQTLSTKRA 287
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + + IS RG P+ T R ++R+EI++
Sbjct: 288 QTVVDYLVHK-GIPSNKISARGMGKANPVSGSTCANVKARAALIDCLAPDRRVEIEV 343
>gi|212709831|ref|ZP_03317959.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM
30120]
gi|212687642|gb|EEB47170.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM
30120]
Length = 357
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + L+ T + + TD IG+ NL +SQ+RA
Sbjct: 230 SDVLFNFNKATLKPEGQQALNELYNELSNIDPTQGRVLVVGFTDRIGSQNYNLPLSQKRA 289
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YL+ + I+ G + P+ N ++R+EI+I
Sbjct: 290 QSVVDYLVAK-GVPASAIAAEGRGKEDPVTGNKCDAVKGRAALIECLAPDRRVEIEI 345
>gi|209543669|ref|YP_002275898.1| hypothetical protein Gdia_1504 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531346|gb|ACI51283.1| OmpA/MotB domain protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 326
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 13/155 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ + + LQ+ V +GD + L K + ++ +A
Sbjct: 175 EQLQRYRSEFFGRLRDILQNQD-GVQVVGDRFVFQ-SEVLFPPGGAELSPKGIADIRALA 232
Query: 101 TILNKFPS-------TVIAIQSHTDSIGTL---KNNLLISQERADVIKSYLIQRGVSSNR 150
++ + ++ + H D +N +S RA + LI S
Sbjct: 233 RTFHQVSAQIPASIPWILRVDGHADRQPIHSAFASNWELSSARAITVVKLLIAE-GISPH 291
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
++ GFA P+DT++T N+RIE ++ R
Sbjct: 292 HLAATGFADFQPLDTHETPAAFARNRRIEFRLTDR 326
>gi|107022117|ref|YP_620444.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116689062|ref|YP_834685.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|170732350|ref|YP_001764297.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|206561293|ref|YP_002232058.1| putative ompA family protein [Burkholderia cenocepacia J2315]
gi|254245998|ref|ZP_04939319.1| Outer membrane protein, OmpA/MotB family [Burkholderia cenocepacia
PC184]
gi|105892306|gb|ABF75471.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116647151|gb|ABK07792.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
gi|124870774|gb|EAY62490.1| Outer membrane protein, OmpA/MotB family [Burkholderia cenocepacia
PC184]
gi|169815592|gb|ACA90175.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
gi|198037335|emb|CAR53262.1| putative ompA family protein [Burkholderia cenocepacia J2315]
Length = 222
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + + V+ +TD IG+ K N +S RA +
Sbjct: 98 DALFDFDKATLKPLGKQKLDELASKIEGMNTEVVVATGYTDRIGSDKYNDRLSLRRAQAV 157
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIFPRGNIKK 190
KSYL+ + I G + P+ T + R ++R+E+++ ++K
Sbjct: 158 KSYLVSK-GVPANKIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTQQVQK 216
>gi|259090547|gb|ACV91896.1| OprL [Pseudomonas fluorescens]
gi|259090549|gb|ACV91897.1| OprL [Pseudomonas fluorescens]
gi|259090551|gb|ACV91898.1| OprL [Pseudomonas fluorescens]
gi|259090557|gb|ACV91901.1| OprL [Pseudomonas fluorescens]
gi|259090559|gb|ACV91902.1| OprL [Pseudomonas fluorescens]
gi|259090563|gb|ACV91904.1| OprL [Pseudomonas fluorescens]
gi|259090565|gb|ACV91905.1| OprL [Pseudomonas fluorescens]
gi|259090567|gb|ACV91906.1| OprL [Pseudomonas fluorescens]
gi|259090569|gb|ACV91907.1| OprL [Pseudomonas fluorescens]
gi|259090571|gb|ACV91908.1| OprL [Pseudomonas fluorescens]
gi|259090585|gb|ACV91915.1| OprL [Pseudomonas fluorescens]
gi|259090587|gb|ACV91916.1| OprL [Pseudomonas fluorescens]
Length = 157
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 54/176 (30%), Gaps = 24/176 (13%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKK-KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K + ++ GC + + N N E +
Sbjct: 3 MLKFGKFAALALALSVAVGCSSKGGDNAGEGAAVDPNAGYGANTGAVDGSLSEEAALRA- 61
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
I L+ + + L + A L + ++ +T
Sbjct: 62 ------------------ITTFYFEYDSSDLKPEAMRALDVHAKDLKAN-GARVVLEGNT 102
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
D+ GT + N+ + + RA ++ YL+ + + + + + + P+ T +
Sbjct: 103 DARGTREYNMALGERRAKAVQRYLVLQ-GVAPGQLELVSYGKERPVATGNDXQSWA 157
>gi|319953905|ref|YP_004165172.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319422565|gb|ADV49674.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 645
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ +++ + +Q + + K+PS I + SHTDS G NL +SQ+
Sbjct: 530 LLQLSTIYFDLNKYNIRPDAEVEIQKVIAAMEKYPSLKIKVNSHTDSRGKDAYNLWLSQK 589
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTK---VGRQNNQRIEIQI 182
RA+ Y++ + S + GF + N++K N+R E I
Sbjct: 590 RAESTVGYMVSK-GISADRLEGEGFGETKLVNGCGNNSKCSSKEHDLNRRSEFII 643
>gi|330947103|gb|EGH47879.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 156
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L L + +A ++ T + I H D+ G+ + N ISQERA + +
Sbjct: 1 AMLLPNTLGPITRLAKVVEGDQKTAVLILGHADTSGSTEANQKISQERAQSVAAIFRL-S 59
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+S RG P ND+ GR N+R+EI + P+ ++
Sbjct: 60 GLERNRLSQRGMGAVMPRAANDSLQGRALNRRVEILMTPQDTMR 103
>gi|87121335|ref|ZP_01077225.1| probable outer membrane protein [Marinomonas sp. MED121]
gi|86163492|gb|EAQ64767.1| probable outer membrane protein [Marinomonas sp. MED121]
Length = 298
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ + V L + L L+A + PS I I HTDS+G+ ++N +S++
Sbjct: 185 IARSAVLFPENGVLLSTRMKDRLDLVALYVANDPSVEYIYIDGHTDSLGSRRDNRELSKQ 244
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ + +YL+++GV + IS R +YP N T+ R+ N+R+ I++
Sbjct: 245 RAEAVTAYLLEQGVEVEKIIS-RYHGERYPTIDNKTRANRERNRRVTIRL 293
>gi|288941479|ref|YP_003443719.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
180]
gi|288896851|gb|ADC62687.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
Length = 680
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 66/179 (36%), Gaps = 9/179 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCY 75
+ + +T+ ++ + + + L I V R+ + I
Sbjct: 505 AASSETESVPEAAATAEPETEAPSESVPAPDRPGLERLESGLAALSIEVERLAPNHIRAD 564
Query: 76 IPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + F L++ +L A +L + + I +HTD+ G NN ++S+ RA
Sbjct: 565 LSRLIQFRDGSVALDESARTLLARFAGLLKEDERVRLHIVTHTDTQGATTNNQVLSERRA 624
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN----NQRIEIQIFPRGNIK 189
I + +++ I+ G P T + R+ N+RIEI + +
Sbjct: 625 ADI-ALILRLEGIGASRITHEGKGMSEPKFTR--EEERRLGPWINRRIEIDLIESDEAR 680
>gi|167946712|ref|ZP_02533786.1| OmpA/MotB [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 152
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 37/124 (29%), Gaps = 2/124 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+G+S+ + ++GC + + S + + G
Sbjct: 1 SVGVSVLALVLVAGCSSTPEKDESASAGAEVSEQSTGAGGASYGGASTAAASQGMAWNGD 60
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ V + + +F +L A L P + ++ H D GT
Sbjct: 61 PLDN--PQSLLSTRVIYFDFDQSQVRSEFRDVLSAHADYLASHPQVSLRLEGHADERGTR 118
Query: 124 KNNL 127
+ NL
Sbjct: 119 EYNL 122
>gi|294054986|ref|YP_003548644.1| OmpA/MotB domain protein [Coraliomargarita akajimensis DSM 45221]
gi|293614319|gb|ADE54474.1| OmpA/MotB domain protein [Coraliomargarita akajimensis DSM 45221]
Length = 191
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 57/192 (29%), Gaps = 11/192 (5%)
Query: 1 MIKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV-----NKRFGSSLDKAED 52
M+K L + + + C + + + D + G D+ +
Sbjct: 1 MVKSLQNALIILTAALFFTACTKKQGPTQYGNMTGGDYADSSDIIPDGQTEGDWGDELVE 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCY-IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ G + IP + LQ A L++ PS +
Sbjct: 61 RDPNATGWSEDGTMYNGREVVRGLIPSVYFGFDSSAIGASERGKLQQAANHLSQNPSDGL 120
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I+ H D GT + NL + R+ + + + + + +K
Sbjct: 121 LIEGHCDWHGTTEYNLALGDRRSTSALD-YLSTLGIDSSRVELLSKGSLE-ATSGLSKSD 178
Query: 172 RQNNQRIEIQIF 183
++R ++ I
Sbjct: 179 ASQDRRADLIIL 190
>gi|206577508|ref|YP_002239403.1| outer membrane protein A [Klebsiella pneumoniae 342]
gi|288936252|ref|YP_003440311.1| OmpA domain protein transmembrane region-containing protein
[Klebsiella variicola At-22]
gi|290510692|ref|ZP_06550062.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55]
gi|206566566|gb|ACI08342.1| outer membrane protein A [Klebsiella pneumoniae 342]
gi|288890961|gb|ADC59279.1| OmpA domain protein transmembrane region-containing protein
[Klebsiella variicola At-22]
gi|289777408|gb|EFD85406.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55]
Length = 350
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + TD IG+ N +S++RA
Sbjct: 223 SDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVMGFTDRIGSEAYNQQLSEKRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YL+ + IS RG P+ N D R ++R+EI++
Sbjct: 283 QSVVDYLVAK-GIPAGKISARGMGKSNPVTGNTCDNVKARAALIDCLAPDRRVEIEV 338
>gi|332300756|ref|YP_004442677.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
gi|332177819|gb|AEE13509.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
Length = 147
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + L ++ +L +A + + ++ HT G N +
Sbjct: 38 EELEQNFNDVKFAKGKADLTREAQLVLCDLAKFMESHSGLKLKLEGHTSEEGDETFNQRL 97
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S+ RA +LI +GVS+ R + G PID + +V N+R E +
Sbjct: 98 SEARAQAAVDFLISQGVSAER-LEAEGKGSTDPIDPDSLEV----NRRTEFVVI 146
>gi|124010476|ref|ZP_01695114.1| immunogenic 75 kDa protein PG4, putative [Microscilla marina ATCC
23134]
gi|123982378|gb|EAY23917.1| immunogenic 75 kDa protein PG4, putative [Microscilla marina ATCC
23134]
Length = 645
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 6/118 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + + F+ + L + IL + P I + SHTDS T K N+ +SQ
Sbjct: 529 VIQVKTIYYDLDKYFIRPDAVKTLDELLVILYRNPKMRIGLSSHTDSRNTSKYNVQLSQR 588
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
R+ YL+ RG+S R I V F + + Q N+R E+ +
Sbjct: 589 RSQSALQYLVSRGISPQRII-VDWFGETKLVTPCPDGVPCNETQHQLNRRTEVLVLEE 645
>gi|332883506|gb|EGK03789.1| hypothetical protein HMPREF9456_01856 [Dysgonomonas mossii DSM
22836]
Length = 660
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 28/138 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + L + L + +LN P+ I + +H D G+ N+ +SQ R
Sbjct: 518 VVLENIFYEFDKATLLPESKKELDGLIDLLNTNPNVTIELSAHADRKGSDDYNIKLSQRR 577
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYP---------------------------IDTN 166
A+ + +YLI S ++ G P + +
Sbjct: 578 AESVVNYLIAG-GISKDRLTAVGKGKSEPKTVTKAIVKKYDFLKEGDILNEEFIEGLTSE 636
Query: 167 DTKVGRQNNQRIEIQIFP 184
++ Q N+R E ++
Sbjct: 637 QQEMADQVNRRTEFKVLS 654
>gi|293396726|ref|ZP_06641002.1| outer membrane protein A [Serratia odorifera DSM 4582]
gi|291420990|gb|EFE94243.1| outer membrane protein A [Serratia odorifera DSM 4582]
Length = 364
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 13/118 (11%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + L + T L+ + + +TD +G N +S+ RA
Sbjct: 236 SDVLFNFGKSSLKPEGQQALDQLYTQLSSMDPKDGSVVVLGYTDPVGKDAANQKLSEARA 295
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI----------DTNDTKVGRQNNQRIEIQI 182
+ YL+ + IS RG + T N+R+EI++
Sbjct: 296 RSVVDYLVSK-GIPADKISARGMGEADQVTDSCGYKNGRATKAQIECLAPNRRVEIEV 352
>gi|237654026|ref|YP_002890340.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
gi|237625273|gb|ACR01963.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
Length = 374
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 50/141 (35%), Gaps = 13/141 (9%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS------- 108
++ V +GD + + + + L +A L +
Sbjct: 236 QEVLGKRKDVQIVGDRFVFS-SEVLFASASDEVSADGMVQLTRLAETLKTLSADMPKDLP 294
Query: 109 TVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
V+ + HTD +N +S RA I +L + ++ G+ +P+D
Sbjct: 295 WVLQVDGHTDRRPIATARFPSNWELSTARALAIVKFLRGQ-GIPPERLAATGYGEFHPLD 353
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
T+ N+RIE+++ R
Sbjct: 354 ARSTEEAYTRNRRIELKLTSR 374
>gi|156975261|ref|YP_001446168.1| hypothetical protein VIBHAR_02990 [Vibrio harveyi ATCC BAA-1116]
gi|156526855|gb|ABU71941.1| hypothetical protein VIBHAR_02990 [Vibrio harveyi ATCC BAA-1116]
Length = 293
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 87 FLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L K L IA + ++ + ++TDS + +S+ RA+ ++SY G
Sbjct: 193 QLTKASKKRLAQIADYVRHNQDIDLVLVATYTDSTDGKSTSQSLSERRAESLRSYFESLG 252
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S R I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 253 LSGER-IQVQGYGKRRPIADNGSPIGKDKNRRVVISL 288
>gi|325522834|gb|EGD01304.1| peptidoglycan-associated lipoprotein [Burkholderia sp. TJI49]
Length = 140
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 57/157 (36%), Gaps = 21/157 (13%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+ L L++ +++ ++ C + K + T
Sbjct: 1 MMSNKARLALAVMMISALAACKSGVKLDDKANNAGAVSTQPSADNVAQ------------ 48
Query: 58 LQDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V + D ++ ++ P+LQ A L P + IQ +
Sbjct: 49 -----VNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGN 103
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
TD GT + NL + Q+RA+ ++ + GV+ ++ +
Sbjct: 104 TDERGTSEYNLALGQKRAEAVRRAMSLLGVNDSQMEA 140
>gi|189423681|ref|YP_001950858.1| serine/threonine protein kinase [Geobacter lovleyi SZ]
gi|189419940|gb|ACD94338.1| serine/threonine protein kinase [Geobacter lovleyi SZ]
Length = 734
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATIL--NKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++V F ++ L+ K L + L + + + S TD+ ++L +S +
Sbjct: 625 RLSLNVKFTADGQLDNKAYRDLDRLVRALSTKELQGRQLLLFSFTDASSDPHSSLALSHQ 684
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
R + L RG+ + GF P+ N TK GRQ N R+EI + R
Sbjct: 685 RVGQVAQELRSRGIMVA---AAEGFGSSLPVADNSTKEGRQRNNRVEIWLAKR 734
>gi|84385524|ref|ZP_00988555.1| Outer membrane protein [Vibrio splendidus 12B01]
gi|84379504|gb|EAP96356.1| Outer membrane protein [Vibrio splendidus 12B01]
Length = 278
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 53/155 (34%), Gaps = 12/155 (7%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + + + + + + + K++
Sbjct: 120 LNELEVQLDYVTSQARCEPPKNENQFRMQLSVIEQLYDLLNVDNQFAENSTEVNPKYMGR 179
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L T+L + S + + H D+ GT + N ++ RA ++ + + I
Sbjct: 180 LAEATTLLKEHKSLDLVVTGHADATGTEEYNDDLALGRAKQVER-YLTIFGLGAQRIKAV 238
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
P+ ++ R N+R+ I+I N +K
Sbjct: 239 SVGETVPLFEGESDGTRLTNRRVSIEIISPKNAEK 273
>gi|197284675|ref|YP_002150547.1| outer membrane protein A [Proteus mirabilis HI4320]
gi|194682162|emb|CAR41796.1| outer membrane protein A [Proteus mirabilis HI4320]
Length = 362
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 12/168 (7%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K L+ D +++ ++ ++ + + + ++
Sbjct: 184 DKGTLNARPDNGMLSVGVAYRFNQETPAPVVEPAPVVAPAPVVENKTFTLRSDVLFNYNK 243
Query: 86 VFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L+ + L + L T + + +TD IG+ NL +S++RA + YL+
Sbjct: 244 SSLKAEGQEALNGLYNELANIDPTQGRVVVIGYTDRIGSQNYNLPLSEKRAQSVVDYLVS 303
Query: 144 RGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ IS G + P+ N D R ++R+EI+I
Sbjct: 304 K-GIPANSISAEGRGKENPVTGNTCDNIKARAALIDCLAPDRRVEIEI 350
>gi|149190367|ref|ZP_01868639.1| sodium-type flagellar protein MotY precursor [Vibrio shilonii AK1]
gi|148835746|gb|EDL52711.1| sodium-type flagellar protein MotY precursor [Vibrio shilonii AK1]
Length = 294
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 35/107 (32%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + L K L+ IA + + + S K ++
Sbjct: 181 ISFTILHYDRNSEQLNKTSQHRLEQIAEYVRYNQDIDLVLVSTYTDSSDSKGESQQLSDK 240
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
I Q I V+G+ + P+ N + +G+ NQR+ I
Sbjct: 241 RASILQDYFQSLGLPKDRIQVQGYGKRRPVAENSSPIGKAKNQRVVI 287
>gi|330013026|ref|ZP_08307548.1| OmpA family protein [Klebsiella sp. MS 92-3]
gi|328533612|gb|EGF60326.1| OmpA family protein [Klebsiella sp. MS 92-3]
Length = 90
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
++ HTD+ G N +S +RA+ + + + RG KYPI +NDT G
Sbjct: 17 RLEGHTDNYGEDSYNEALSLKRANSVADAWAEGAHVPRSNLVTRGLGKKYPIASNDTAAG 76
Query: 172 RQNNQRIEIQI 182
R N+R+ + I
Sbjct: 77 RAENRRVTVVI 87
>gi|313204438|ref|YP_004043095.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312443754|gb|ADQ80110.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 743
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + ++ ML I ++L + + I S+TD GT++ NL +SQ+RA
Sbjct: 584 QMDTIYYDFDKWDIQPVAYSMLDSIVSLLKSYTMMHVEIASYTDKRGTVEYNLWLSQQRA 643
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQN----NQRIEIQIF 183
+ + +Y++++GV + R I RG+ I R+ N+R EI++
Sbjct: 644 NAVVNYIVRQGVDAGR-IKARGYGKNRLIVGDPSDISDREKIDQINRRSEIKVT 696
>gi|146307460|ref|YP_001187925.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145575661|gb|ABP85193.1| phosphate ABC transporter substrate-binding protein, PhoT family
[Pseudomonas mendocina ymp]
Length = 460
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 52/142 (36%), Gaps = 8/142 (5%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
++ + QL ++ ++ L+ K LQ +
Sbjct: 324 IAQTVQAVQVAPDAQLPADYRQLAEQAQRLSVNFR---FQEGSATLDNKAQRDLQRVMDY 380
Query: 103 LNKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L + + + D+ + L+S+ RA ++ L ++GV V G +
Sbjct: 381 LRQHDKLQGKVVLVGFGDAKSDPERAELLSKLRAMAVRRELARQGVLFR---EVTGLGGE 437
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
P+ N+ + GR N+R+E+ +
Sbjct: 438 LPVAANNEEHGRIRNRRVEVWV 459
>gi|153871121|ref|ZP_02000371.1| lipoprotein [Beggiatoa sp. PS]
gi|152072413|gb|EDN69629.1| lipoprotein [Beggiatoa sp. PS]
Length = 285
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 13/154 (8%)
Query: 40 NKRFGSSLDKAEDE------FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
K ++ ++ IG +P+ +
Sbjct: 129 GNNVQEYKQKLKNAQNNIVVSASEIYQNLSTKRSIGPPKVVDVPIQ-FPTGSSEIRGNAK 187
Query: 94 PMLQLIAT----ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
Q IA + ++ I I+ HTD+ G N +S +RA IK L++
Sbjct: 188 RQCQEIAQAVRDVFKTDKNSKIRIEGHTDNQGKADYNRGLSAKRAKKIKEQLVKELNLPA 247
Query: 150 RFISVRGFAYKYPID--TNDTKVGRQNNQRIEIQ 181
V G+ + PI N + G N+R+ +
Sbjct: 248 ERFEVVGWGEEKPIARCNNGDEHGCFLNRRVTLV 281
>gi|149191257|ref|ZP_01869513.1| outer membrane protein [Vibrio shilonii AK1]
gi|148834927|gb|EDL51908.1| outer membrane protein [Vibrio shilonii AK1]
Length = 275
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + V + K++ L A IL + P+ +++ H D+ G + N I++ RA +
Sbjct: 159 DNQFAYNSVEVNPKYMGHLAEAANILKQHPTIRLSVTGHADATGGTEYNEKIAKGRAQQV 218
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
K + + I + P+ D+ R N+R+ I++ N
Sbjct: 219 KR-YLTIFGLAPGRIETHSLGEELPLYEGDSPGVRLTNRRVSIEVIADKN 267
>gi|85713237|ref|ZP_01044263.1| Sodium-type flagellar protein motY precursor [Idiomarina baltica
OS145]
gi|85692932|gb|EAQ30904.1| Sodium-type flagellar protein motY precursor [Idiomarina baltica
OS145]
Length = 303
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L L+ I+ L + I S+TD++G + N ++++RA+ IKS+ +
Sbjct: 197 DSDELTAPSQRKLKQISDYLKVDADLKLVLIDSYTDALGAREPNQTLTEQRANAIKSFFV 256
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+RG+ ++R +V PID ND ++GRQ N+R+ +Q+ +++
Sbjct: 257 ERGIKADRIQTVA-HGEDRPIDHNDNEIGRQKNRRVIVQLNKSSDVE 302
>gi|304383837|ref|ZP_07366295.1| OmpA family protein [Prevotella marshii DSM 16973]
gi|304335093|gb|EFM01365.1| OmpA family protein [Prevotella marshii DSM 16973]
Length = 689
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L + L + +L + P I +++H D G+ N ++SQ R
Sbjct: 517 VLIDNIFYDFNRATLRPESTAALDELVKLLQENPHVTIELRAHCDYRGSDIYNKVLSQRR 576
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYP---------------------------IDTN 166
A+ + +YL+ + +S G+ + P +D +
Sbjct: 577 AEAVTAYLVA-HGIAKDRLSPVGYGKERPKIIRRKLTERYPWMKEGDVLSESYIKRLDAS 635
Query: 167 DTKVGRQNNQRIEIQIF 183
V Q N+R E +
Sbjct: 636 RQDVCNQLNRRTEFIVL 652
>gi|330752331|emb|CBL87285.1| protein with similarity to outer membrane OmpA family protein
[uncultured Flavobacteria bacterium]
Length = 266
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 4/168 (2%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
C A+ K+ ++ +ND+ + K G+ K E + Q + +
Sbjct: 99 CSCATCLKRNSEVNLNNDSLVFVKFIGAQSIKLELNKAIPKQKKKWFERELVKGDKIRLK 158
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL--KNNLLISQERAD 135
+ E L + ++N +P+ I ++ H +S G N ++S +RA+
Sbjct: 159 NILFVGGEARFRAVSYKDLNQLLAVMNAYPNLKILVEGHVNSPGKRNTNTNQVLSTQRAE 218
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-KVGRQNNQRIEIQI 182
+ YLI++ +S GF I N + Q N+R+EI +
Sbjct: 219 AVVKYLIKK-GIRESRLSFIGFGNTKMIYPNTKLEYEMQFNRRVEILV 265
>gi|145299432|ref|YP_001142273.1| sodium-type polar flagellum motor protein [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142852204|gb|ABO90525.1| sodium-type polar flagellum motor protein [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 291
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
V + L L +I + S V+ I +++DS G N +S++
Sbjct: 177 IAFSVLSYDKNSDQLSLASRRRLAMIGEYVKVDKSIDVVVINAYSDSYGGRWPNQKLSEK 236
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
RAD IK + ISV G K +N+T+ GR N+R+ I + G I
Sbjct: 237 RADAIKKVFVDL-GIDPGKISVEGHGEKRHATSNETEDGRAKNRRVVINMGRNGTI 291
>gi|196233271|ref|ZP_03132117.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
gi|196222742|gb|EDY17266.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
Length = 564
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 59/181 (32%), Gaps = 16/181 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL-DKAEDEFQMQLQD 60
+K + L ++ A K + + G+ L D+ E
Sbjct: 394 MKLIRLFSIAALALATLSFAGCTHGKKGAGAGSGAADGDYVNGTPLPDRQEG-------- 445
Query: 61 TGIVVSRIGDMI-TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
VS +G + + + +A L +T I I TD
Sbjct: 446 ----VSFLGSNVDRNKFRPVYFGFDSYAIGGGERSKIDEVAQFLKSASNT-IIIAGFTDE 500
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
GT + N + + RA ++ LI+ G ++ +V F + P D + N+R E
Sbjct: 501 RGTPEYNRGLGERRAQAVREALIRDGADGSKIQTVS-FGAEMPADQGSNESAWAKNRRAE 559
Query: 180 I 180
Sbjct: 560 F 560
>gi|327396327|dbj|BAK13749.1| OmpA/MotB domain protein [Pantoea ananatis AJ13355]
Length = 287
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 56/176 (31%), Gaps = 30/176 (17%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ L + + + + + V + + + L ++
Sbjct: 87 SQAAAARLNLLYQLRNNLKQSFPELPVDVIPEEGTLRFQ-GEGLFTSNSFTLSDDKRKIV 145
Query: 97 QLIATILNK-----------------FPSTVI----AIQSHTDSIGTLKNNLLISQERAD 135
+ +A L+ PS I I+ HTDS G NL +S RA
Sbjct: 146 EALAKTLDSLLPCYTFSQSVGWNKSCNPSFAIIEAVQIEGHTDSKGEDVYNLNLSTNRAI 205
Query: 136 VIK--------SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + S +SV G+ P+ NDT N+RI+++I
Sbjct: 206 TTFTSMLAAAPDLVAHFNMRSQPVLSVAGYGKMRPVKPNDTPQNMAMNRRIDLRII 261
>gi|83647670|ref|YP_436105.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83635713|gb|ABC31680.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 346
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ E L + L + + PS I + HTDS G N +S++
Sbjct: 217 VERTAVFFKLDESVLTDQDKRELDKVVLYVKADPSVTAIFVDGHTDSTGRRIYNRRLSKD 276
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ + +YL+ + ++ I+ R +YP+ N N+R +++
Sbjct: 277 RAEAVTAYLMDK-GVASEKITTRYHGERYPVVQNAGPKNLARNRRATVRL 325
>gi|325068018|ref|ZP_08126691.1| OmpA/MotB [Actinomyces oris K20]
Length = 139
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 9/130 (6%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
D+ + S G + V+F L + +L I N P + + HT
Sbjct: 10 SDSAVTYSSDGQTTVASLSGDVTFDVDSSALTDRAKQVLDEIVKRWNGKPPATVTVVGHT 69
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND------TKVG 171
DS+ +N +S++RA + YL + + + G P+ + + G
Sbjct: 70 DSVADDAHNQTLSEQRAKAVADYLTSK--VPSLNVQSSGKGESEPVASETNADGSVNEAG 127
Query: 172 RQNNQRIEIQ 181
+ N+ ++++
Sbjct: 128 KAANRHVDVR 137
>gi|330810626|ref|YP_004355088.1| hypothetical protein PSEBR_a3732 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327378734|gb|AEA70084.1| Conserved hypothetical protein; putative exported protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 449
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 51/147 (34%), Gaps = 8/147 (5%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
N ++ + + +SR +T L+ K L
Sbjct: 308 AANGFIAQTVQAMAVTPNALMPEGYQALSRHAQRLTVNFR---FEEGSASLDNKAHQDLG 364
Query: 98 LIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ + + + + D+ L+S+ RA ++ L++ GV+ VR
Sbjct: 365 RVFDYIKQHGKTDRSVTLVGFGDAKDDPARADLLSKLRAMAVRRELVKYGVA---LREVR 421
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
GF P+ N GR N+R+E+ +
Sbjct: 422 GFGALMPVAANSEDAGRVRNRRVEVWV 448
>gi|227356882|ref|ZP_03841261.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906]
gi|227162952|gb|EEI47897.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906]
Length = 368
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 12/168 (7%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K L+ D +++ ++ ++ + + + ++
Sbjct: 190 DKGTLNARPDNGMLSVGVAYRFNQETPAPVVEPAPVVAPAPVVENKTFTLRSDVLFNYNK 249
Query: 86 VFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L+ + L + L T + + +TD IG+ NL +S++RA + YL+
Sbjct: 250 SSLKAEGQEALNGLYNELANIDPTQGRVVVIGYTDRIGSQNYNLPLSEKRAQSVVDYLVS 309
Query: 144 RGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ IS G + P+ N D R ++R+EI+I
Sbjct: 310 K-GIPANSISAEGRGKENPVTGNTCDNVKARAALIDCLAPDRRVEIEI 356
>gi|163751264|ref|ZP_02158492.1| sodium-type flagellar protein MotY [Shewanella benthica KT99]
gi|161328978|gb|EDQ00052.1| sodium-type flagellar protein MotY [Shewanella benthica KT99]
Length = 277
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V L + + + L + I ++TDS G N +S++
Sbjct: 165 IAFTVLTYESGGSELTRFSKSQIAKVQEYLAYDSEIELVLIDAYTDSYGGRSINQRVSEQ 224
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD +K++ + G++ +R +V G + + +N + R N+R+ I+I
Sbjct: 225 RADSVKNFFLSAGINQDRIHTV-GHGERRHVASNASIDERGRNRRVVIRI 273
>gi|308270508|emb|CBX27120.1| hypothetical protein N47_A11490 [uncultured Desulfobacterium sp.]
Length = 200
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 73/205 (35%), Gaps = 29/205 (14%)
Query: 1 MIKELGLSMFIMTT--ISGCGLA--------SREKKKVFLHKSNDTDIVN---------- 40
M L +++ + +SGC + K + SN V+
Sbjct: 1 MYYRLCIALLLALVFHLSGCVKKMDMVVLVPDTDGKTGIVTVSNQAGSVSIDSPNHATTI 60
Query: 41 ---KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ + K E + L + + + F + L ++
Sbjct: 61 TDSNKIPAPPIKLEQKTIDTLFSEALSIQPKQP-----FHFILYFKKDTLLTPDSNKLIP 115
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
I + + ST I + HTD++G+ N+ +S++RAD +K LI + I+
Sbjct: 116 DIIKSIQERNSTDITVVGHTDTLGSKDYNMALSRKRADSVKDLLIDQ-GVEANNINTTSH 174
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
+ P+ + V N+R+E+ +
Sbjct: 175 GKENPLIKTEDNVSEPGNRRVEVIV 199
>gi|285019096|ref|YP_003376807.1| outer membrane protein [Xanthomonas albilineans GPE PC73]
gi|283474314|emb|CBA16815.1| hypothetical outer membrane protein [Xanthomonas albilineans]
Length = 216
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 59/149 (39%), Gaps = 13/149 (8%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF- 106
E + L + + I I + ++ L+ + +L +AT L +
Sbjct: 63 KTLELALAVPLATGRVTL--IDGRIGIR-GNVLFALNSDQLQPQGRDLLDSLATPLAGYL 119
Query: 107 --PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ ++ + TD +N +S ERA + LI GV ++ + F
Sbjct: 120 KARNEILMVSGFTDDRQVRVGNRQFVDNWELSAERALTVTRALIDAGVPADAIFAAA-FG 178
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ P+ +N GR +N+R+E+ PR N
Sbjct: 179 AQQPVASNADDAGRASNRRVEMAPLPRPN 207
>gi|82703306|ref|YP_412872.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
gi|82411371|gb|ABB75480.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
Length = 225
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 12/128 (9%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V + I+ + + L + L + L I + D +G+
Sbjct: 92 VYTEPEKISLSA-DQLFDFDKANLRPEGKQTLDDLVAKLGGVKYDTIVAIGYADRLGSDA 150
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN---------- 174
N +S RA+ +K+YL+ I + G P+ T DT G +
Sbjct: 151 YNKKLSMRRAESVKAYLVNEKGIPADRIFIDGKGEANPV-TGDTCKGNKKTKALIACLQP 209
Query: 175 NQRIEIQI 182
++R+E+++
Sbjct: 210 DRRVEVEV 217
>gi|332667996|ref|YP_004450784.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332336810|gb|AEE53911.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 542
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L + L +A K + I HTD G + N +S+ RA
Sbjct: 436 TAARVLFAFDQAVLNEAARQELAAVAEAAKKANRYTLTIIGHTDDAGAAEYNQQLSERRA 495
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ Y +G+++ + P TND++ + N+R+E+ +
Sbjct: 496 KAVADYFAAQGLTAK----IAAKGELVPAVTNDSEGNKAKNRRVEVVL 539
>gi|317491503|ref|ZP_07949939.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316921050|gb|EFV42373.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 351
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + L+ + + +TD IG+ + N +S++RA
Sbjct: 224 SDVLFNFNKATLKPQGQQALDQMYAQLSNLDPKDGSVVVLGYTDRIGSEQYNQKLSEQRA 283
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + IS RG P+ T D R ++R+EI++
Sbjct: 284 QSVVDYLVSK-GIPADKISARGMGKADPVTGSTCDNVKARAALIECLAPDRRVEIEV 339
>gi|297183087|gb|ADI19231.1| flagellar motor protein [uncultured delta proteobacterium
HF0200_14D13]
Length = 211
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 52/138 (37%), Gaps = 20/138 (14%)
Query: 73 TCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTV---IAIQSHTDSIGT----LK 124
+P F + L+ + +L + P + ++ H D++
Sbjct: 65 IVSLPQDFLFRSGDAELKAGAIRVLTPFFQKIRDLPEHQGDLVTVEGHADNLPIHTDKYP 124
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN---------- 174
+N +S RA + + LI R ++ +SV G++ P + G
Sbjct: 125 SNWELSTARATNVATMLINRMGYASDTLSVNGYSDTRPKVSYKDARGNALRGTALEVARR 184
Query: 175 -NQRIEIQI-FPRGNIKK 190
N+R+EI I P ++++
Sbjct: 185 TNRRVEIVITTPPKSMEE 202
>gi|163733522|ref|ZP_02140965.1| peptidoglycan-associated lipoprotein, putative [Roseobacter
litoralis Och 149]
gi|161393310|gb|EDQ17636.1| peptidoglycan-associated lipoprotein, putative [Roseobacter
litoralis Och 149]
Length = 173
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ V E + ++ A L I+ H D GT + N+ + RA+
Sbjct: 63 DRVLFSVDESAINAVGQTTVEGQAQWLLANTDYTAVIEGHADEQGTREYNVALGARRANA 122
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
++ YLI RGV+ NR +V + + PI+ ++ N+R +
Sbjct: 123 VREYLISRGVAGNRLQTVS-YGKERPIEICSSEECYAKNRRAVTVLAS 169
>gi|153831615|ref|ZP_01984282.1| OmpA family protein [Vibrio harveyi HY01]
gi|148872125|gb|EDL70942.1| OmpA family protein [Vibrio harveyi HY01]
Length = 301
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 50/179 (27%), Gaps = 25/179 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K L M ++GC S + E + +
Sbjct: 1 MKTTIRLLSGMIAGAILAGCS---------------------ADAYVSQENREKFADVNV 39
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I + + + L + I I HTD
Sbjct: 40 SKFLISECLAPQREIHIAVAQHFDFDKSIIREADAASLDAFIRDIQGLSG-RITIVGHTD 98
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ + N +S RA+ +++YL Q+ V+ F P+ + R N+R
Sbjct: 99 FKGSDEYNEKLSMRRAESVEAYLQQQLNPEQYDWEVKHFGESQPLALGKSDQARAENRR 157
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 2/108 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ + L L L I + HTD +G+L N +++ RA + +Y
Sbjct: 191 FDFDKSELKPEDLSQLDDFIAKLQGLEG-SIMVAGHTDQVGSLSYNEQLAERRAQTVVAY 249
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
L + S V+ F P+ ++ N+R +F +
Sbjct: 250 LKTKLDPSQFVWEVKAFGELQPVINEESPEANALNRRA-FIVFKESEL 296
>gi|152989276|ref|YP_001348049.1| hypothetical protein PSPA7_2689 [Pseudomonas aeruginosa PA7]
gi|150964434|gb|ABR86459.1| hypothetical protein PSPA7_2689 [Pseudomonas aeruginosa PA7]
Length = 465
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 56/142 (39%), Gaps = 8/142 (5%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+ + + Q+ ++ +T L+ K L +Q +
Sbjct: 329 VAQRIQAVQVAPRPQMPAEYRQLAEQARRLTVNFR---FQEGSALLDNKALLDVQRLLDY 385
Query: 103 LNKFPSTV--IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L + + D + ++L+S+ RA ++ L + GVS + GF +
Sbjct: 386 LRQNQKMRKRTVLVGFGDPKSDAERSVLLSRLRAMAVRRELARGGVSFR---EIVGFGDE 442
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
P+ +N+ + GRQ N+R+E+ +
Sbjct: 443 LPVASNEQEAGRQKNRRVEVWV 464
>gi|325277836|ref|ZP_08143389.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
gi|324097047|gb|EGB95340.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
Length = 830
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA+ L P+ I I H D +G ++NL +S++
Sbjct: 711 SDTLFAFGRADFQSLKSEGQNQLSAIASKLLNTPNIGKIVISGHADQLGDSQSNLQVSKQ 770
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA I + + +G + P+ D + R N+R+EI++
Sbjct: 771 RAQTI-RTYLVGKGVPAELVVAQGEGSRKPLVNCDMQQARAQLIKCLEPNRRVEIEV 826
>gi|332288152|ref|YP_004419004.1| outer membrane protein A [Gallibacterium anatis UMN179]
gi|330431048|gb|AEC16107.1| outer membrane protein A [Gallibacterium anatis UMN179]
Length = 361
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 11/134 (8%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHT 117
V + + + + L+ + L + + K S + + +T
Sbjct: 219 SAAPAPVVEVVNKKFALSSDVLFAFGKANLKPEAAQSLDNLQQEITKVGSLSSVEVAGYT 278
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR--- 172
D IG+ K N +SQERA+ + +YL+ + S I G+ P+ N GR
Sbjct: 279 DRIGSDKYNQKLSQERANTVANYLVSKS-ISPDVIKAVGYGEANPVTGNTCDAVKGRKAL 337
Query: 173 ----QNNQRIEIQI 182
++R+E+ +
Sbjct: 338 IACLAPDRRVEVSV 351
>gi|212634650|ref|YP_002311175.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212556134|gb|ACJ28588.1| OmpA [Shewanella piezotolerans WP3]
Length = 325
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
V L + + + L + ++ I ++TDS G N +S +
Sbjct: 213 IAFTVLTYESGGTELTRYAKAQINKVQEYLAYDQNVDLVLIDAYTDSYGGRSANERVSVQ 272
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD +K + G+ +R I G + + +N T R N+R+ I+I
Sbjct: 273 RADSVKELFVASGIPQSR-IHTMGHGERRHVASNKTIDERARNRRVVIRI 321
>gi|217970007|ref|YP_002355241.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
gi|217507334|gb|ACK54345.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
Length = 200
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 8/138 (5%)
Query: 52 DEFQMQLQDT-----GIVVSRIGD-MITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILN 104
+ QL G+ + GD IPV + L +A L
Sbjct: 60 AALREQLAKATTGLAGVEIGSAGDTGFRVQIPVADGFASGSPAIRPTLGRALDALAPALA 119
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ + HTDS G+ NL +S RA+ + ++L +RG++ +R ++ G P+
Sbjct: 120 AEAGVAVRVVGHTDSQGSEMVNLRLSIARAEAVVAWLRERGIALDR-LAADGRGEADPLT 178
Query: 165 TNDTKVGRQNNQRIEIQI 182
+N T+ GR N+RIE+ +
Sbjct: 179 SNATEEGRVRNRRIELIL 196
>gi|300726777|ref|ZP_07060207.1| immunogenic 75 kDa protein PG4 [Prevotella bryantii B14]
gi|299775890|gb|EFI72470.1| immunogenic 75 kDa protein PG4 [Prevotella bryantii B14]
Length = 689
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 56/168 (33%), Gaps = 37/168 (22%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
G++ D E Q L V I + L + L + +
Sbjct: 494 IGTTEDSQEHVLQFPLASITAPV---------LIDNIFYEFDKANLTSESTKALDELVNL 544
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA---- 158
LN+ P+ I + +H D G+ N +SQ RA+ + +YLI + + ++ G+
Sbjct: 545 LNENPNVTIELSAHCDYKGSEDYNKQLSQRRAESVVNYLIAK-GIAKDRLTPVGYGKDKP 603
Query: 159 ---------YKYPIDTND--TKV------------GRQNNQRIEIQIF 183
+ ND T+ Q N+R E +
Sbjct: 604 KTIKKKLTEKYKWLKENDVLTEEYIKKLSKEEQEICNQLNRRTEFIVL 651
>gi|261344255|ref|ZP_05971899.1| outer membrane protein A [Providencia rustigianii DSM 4541]
gi|282567857|gb|EFB73392.1| outer membrane protein A [Providencia rustigianii DSM 4541]
Length = 353
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + L+ T + + TD IG+ NL +SQ+RA
Sbjct: 226 SDVLFNFNKASLKPEGQQALNELYNELSNIDPTQGRVLVVGFTDRIGSQNYNLPLSQKRA 285
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YL+ + I+ G + P+ N ++R+EI+I
Sbjct: 286 QSVVDYLVAK-GVPASAIAAEGRGKEDPVTGNKCDAVKGRAALIECLAPDRRVEIEI 341
>gi|325279593|ref|YP_004252135.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
20712]
gi|324311402|gb|ADY31955.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
Length = 377
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 62/161 (38%), Gaps = 5/161 (3%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-S 81
K+ + + ++V + L E ++ ++ V I IP +
Sbjct: 219 TAPKQAVIDEMAAANLVLANQVTQLQNRPPEIKVIEKEVVRPVETKNVEIVESIPSTIPF 278
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ ++ + P++ I T + P I I + D G + NL ISQERA+ + + L
Sbjct: 279 KFNSAVVQDIYDPLIYNIGTFMKNNPDVKIRIVGYADKFGPINVNLRISQERAEAVANML 338
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-QNNQRIEIQ 181
+ ++ + + + P N+ K R +EI
Sbjct: 339 KKDYGINSNRMVIEYVGKEKPYYNNNNKWNRCAM---VEII 376
>gi|186472558|ref|YP_001859900.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184194890|gb|ACC72854.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 207
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 17/191 (8%)
Query: 8 SMFIMTT-ISGCGLASR--------EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ + GC + + KS + V ++ + A+ Q
Sbjct: 17 VLAAALACLCGCSTPDKITLLPNPDGSVGSVVVKSGNNTQVLDHAYATAEVAKSGKIEQA 76
Query: 59 QDTGIVVSRIGDMITCYIP-------VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
T V + P ++ F S L + +Q + +L +P+ +
Sbjct: 77 VGTPANVETRYGTLLAAQPPRPTTFTINFLFDSATELAPQSAVTVQQMKAVLATWPAPHL 136
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ HTD G+ + + +S +RA + +LI + R I + P+ V
Sbjct: 137 TVVGHTDLAGSPEYDDRLSMQRAQTVAKFLI-KAGIPARQIETAARGKREPLVHTADGVP 195
Query: 172 RQNNQRIEIQI 182
Q N+R+ I I
Sbjct: 196 NQMNRRVVITI 206
>gi|159043677|ref|YP_001532471.1| OmpA/MotB domain-containing protein [Dinoroseobacter shibae DFL 12]
gi|157911437|gb|ABV92870.1| OmpA/MotB domain protein [Dinoroseobacter shibae DFL 12]
Length = 212
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 62/175 (35%), Gaps = 22/175 (12%)
Query: 6 GLSMFIMTTISGCGLA---SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+++ + + C + S + F + + +V S+ F ++ T
Sbjct: 8 FIALTLTAALGACAYSEIGSEVDEGGFGDATMNNTLVQTGELSASISLAQRFAREVPST- 66
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
++ L + L + A + +FP ++ HTD +G+
Sbjct: 67 ----------------VNFAFNQSTLTSEARAALDVQADFIKQFPELRFSVFGHTDLVGS 110
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
N + Q RA + +YL+ RGV + ++ P+ + R N+R
Sbjct: 111 AAYNRRLGQARATTVVNYLVSRGVQPEQLQALVSLGETQPLVVTQDREMR--NRR 163
>gi|255019464|ref|ZP_05291566.1| OmpA/MotB [Acidithiobacillus caldus ATCC 51756]
gi|254971096|gb|EET28556.1| OmpA/MotB [Acidithiobacillus caldus ATCC 51756]
Length = 93
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+A + P V+ + + +GT NL +S+ RA+ + YL + GV +R + ++G +
Sbjct: 1 MADFAKQHPDAVLDVNGYCSKVGTYAYNLKLSKLRAESVAQYLERHGVPRDRMV-LKGHS 59
Query: 159 YKYPIDTNDTKVGRQNNQRIEI 180
Y P+ +N T GR NQR+EI
Sbjct: 60 YNDPVASNATPEGRFLNQRVEI 81
>gi|152993346|ref|YP_001359067.1| peptidoglycan-associated lipoprotein [Sulfurovum sp. NBC37-1]
gi|151425207|dbj|BAF72710.1| peptidoglycan-associated lipoprotein [Sulfurovum sp. NBC37-1]
Length = 172
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 48/132 (36%), Gaps = 8/132 (6%)
Query: 57 QLQDTGIVVSRIGDMITCY------IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
++ + V G + + + + A+ +
Sbjct: 41 EITGDTVTVDENGAGGSLGNSSADGFTSVYFTFDDYSISGAMQSKISADASRAAQTSG-K 99
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I ++ + D GT + N + +RA +K L GV + R + V + P+ ++ T
Sbjct: 100 IKVEGNCDEFGTDEYNYALGLKRAKAVKDALRAEGVDTARMVMVS-YGESNPVCSSPTDS 158
Query: 171 GRQNNQRIEIQI 182
N+R+++++
Sbjct: 159 CYARNRRVDLRL 170
>gi|111219587|ref|YP_710381.1| lipoprotein [Frankia alni ACN14a]
gi|111147119|emb|CAJ58764.1| hypothetical protein; putative lipoprotein [Frankia alni ACN14a]
Length = 168
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 61/177 (34%), Gaps = 20/177 (11%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM 71
M + ++ + +H D V LD++ E + + G
Sbjct: 1 MLALVAAAPVPDDEVRAAVHTLRTDDAVRPI---DLDRSVVELRTE--------EHRGAE 49
Query: 72 ITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
T + V F L + +A L + I + +TDS GT N+++S
Sbjct: 50 TTLVLSADVLFAFDSAELTATARRQIADVAGRLAG-SAAPIRVDGYTDSFGTPAYNVILS 108
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQ 181
Q RA + L + +S RG PI + D GR N+R+ I
Sbjct: 109 QRRASAVADLLRPAA-PAGFLVSARGHGSADPIAHDTLPDGSDDPAGRAINRRVTIT 164
>gi|15919973|ref|NP_361033.1| TraQ protein [Plasmid pSB102]
gi|15722272|emb|CAC79164.1| TraQ protein [Plasmid pSB102]
Length = 184
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 70/189 (37%), Gaps = 10/189 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG---SSLDKAEDEFQMQL 58
+ +L + + ++ C + ++ D + L A+D+ + Q
Sbjct: 1 MHKLAI-LSCAVLLAACSSPPKPPTVSGSNRHPVNDARTAEVLSLRAELADAQDKLRNQS 59
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT--ILNKFPSTVIAIQSH 116
++ + + + V V F F P +AT L I ++
Sbjct: 60 TQPVVLAAPVKPALPASQTVSVYFPFNS---SAFRPTQTQVATLLPLLGGNVRQIWVRGR 116
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD + ++ RA K++L+ + S ISV + + N + GR N+
Sbjct: 117 TDGDRPSAADERVALNRALAAKNWLVAQ-GVSPLKISVNYVSAGDYVADNVSAAGRAQNR 175
Query: 177 RIEIQIFPR 185
R++I++F R
Sbjct: 176 RVDIEVFNR 184
>gi|46398707|gb|AAS92039.1| IcmN protein [Legionella pneumophila]
Length = 168
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 61/170 (35%), Gaps = 9/170 (5%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
+S C + N+ + R + D + L GI V+ +G
Sbjct: 1 LLLSAC-------NRSGYIPENEVPKLPCRVDGACDATIIKMMTDLNKKGIKVASVGQNY 53
Query: 73 TCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
IP F + L +L IA L +F I + S++ ++K ++
Sbjct: 54 LISIPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSVKRERALTL 113
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
R+ V+ YL + +R I +G PI + R N R+EI
Sbjct: 114 ARSRVVSEYLWSQ-GVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEIT 162
>gi|271501514|ref|YP_003334540.1| OmpA domain-containing protein transmembrane region-containing
protein [Dickeya dadantii Ech586]
gi|270345069|gb|ACZ77834.1| OmpA domain protein transmembrane region-containing protein
[Dickeya dadantii Ech586]
Length = 354
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + TD +G+ + N +S +RA
Sbjct: 227 SDVLFNFNKATLKPEGQRSLDQLYTQLSTLDPKDGSVVVLGFTDRLGSDQYNQTLSAKRA 286
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + + IS RG P+ T R ++R+EI++
Sbjct: 287 QTVVDYLVHK-GIPSNKISARGMGKANPVTGSTCANVKARAALIECLSPDRRVEIEV 342
>gi|85714945|ref|ZP_01045930.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
gi|85698142|gb|EAQ36014.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
Length = 209
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
L K P L + L + +VI + HTD+ G+ + N +S+ RA+
Sbjct: 96 QIYFDFDSAELSAKAEPQLNNLGQALTSPELAGSVIMLGGHTDAKGSDRYNQSLSERRAE 155
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
IK +LI+R S + G+ + D N+R+EI
Sbjct: 156 TIKRFLIERYKISPENLVAVGYGESRLKNKADPDA--AENRRVEIV 199
>gi|228018095|gb|ACP52726.1| fibronectin-binding protein [Campylobacter coli]
Length = 211
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ G T + H F + + F ++ IA +L++ ++ HTD+I
Sbjct: 104 EGALLDENGCEKTISLEGHFGF-DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI 162
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
G+ N +S+ RA+ + +++ I G+ P +NDTK
Sbjct: 163 GSRAYNQKLSERRANSVAKE-LEKFGVDKSRIQTVGYGQDKPRSSNDTKE 211
>gi|330503247|ref|YP_004380116.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328917533|gb|AEB58364.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 460
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 52/147 (35%), Gaps = 8/147 (5%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ ++ + Q+ +++ ++ L+ K LQ
Sbjct: 319 ADSGFIAQTVQAVKVATDPQMPTDYRQLAQQAQRLSVNFR---FQEGSATLDNKAHRDLQ 375
Query: 98 LIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ L + + + D + L+S+ RA ++ L ++GV +
Sbjct: 376 RVLDYLRQHDKLQNKVVLVGFGDPKNDPERAELLSKLRAMAVRRELAKQGVLFR---EIT 432
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G + P+ ND GR N+R+E+ +
Sbjct: 433 GLGSELPVAANDQDNGRIRNRRVEVWV 459
>gi|325518447|gb|EGC98149.1| OOP family OmpA-OmpF porin [Burkholderia sp. TJI49]
Length = 207
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + + V+ +TD IG+ K N +S RA +
Sbjct: 83 DALFDFDKATLKPLGKQKLDELASKIEGMNTEVVVATGYTDRIGSDKYNDRLSLRRAQAV 142
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIFPRGNIKK 190
KSYL+ + I G + P+ T + R ++R+E+++ ++K
Sbjct: 143 KSYLVSK-GVPANKIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTQEVQK 201
>gi|262375753|ref|ZP_06068985.1| OmpA/MotB [Acinetobacter lwoffii SH145]
gi|262309356|gb|EEY90487.1| OmpA/MotB [Acinetobacter lwoffii SH145]
Length = 215
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/194 (13%), Positives = 61/194 (31%), Gaps = 22/194 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+++ ++ + + + + KR L ++ I
Sbjct: 18 VMAVVMLLLVMSVLQKTYAELRHKQELEQGGAAQQKRISEMLTDLKNSVDETGASNLISF 77
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKK----FLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
I + ++ V + F + Q I + L + P + ++ HTD+
Sbjct: 78 DIADGKI--TLKENIFNVGSACITPSAAKTFKSLDQRIVSFLKENPKASVFVEGHTDNSI 135
Query: 122 TLKNNLLISQERADVIKSYLIQR--------------GVSSNRFISVRGFAYKYPIDTND 167
+ L ++ ++ + + + V G+ P++ D
Sbjct: 136 VKQPVLDFKEKCTVYDDNFTLSAARAREARKLIISSLDANEANRVVVAGYGDSRPLNGID 195
Query: 168 TKVGRQNNQRIEIQ 181
GR N+R+EIQ
Sbjct: 196 PSDGR--NRRVEIQ 207
>gi|94986926|ref|YP_594859.1| flagellar motor protein [Lawsonia intracellularis PHE/MN1-00]
gi|94731175|emb|CAJ54537.1| Flagellar motor protein [Lawsonia intracellularis PHE/MN1-00]
Length = 237
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 43/133 (32%), Gaps = 7/133 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ + +S + + + +F L + ++ + +L ++ + +
Sbjct: 94 MADAIPQSATGISADDVGVLLRVNSNSTFLPGTATLTPEGKKVMGTVLAVLREY-NLYLV 152
Query: 113 IQSHTDSIGTLKNNLLISQERAD----VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I+ H D K + S + + I G+A P++ +
Sbjct: 153 IRGHADIGEITKGSPFASNWELSGARAAAAAQYLVEHGIKASRIRSVGYADTRPLEP-SS 211
Query: 169 KVGRQNNQRIEIQ 181
G N+RIE
Sbjct: 212 PEGSTKNRRIEFY 224
>gi|120553263|ref|YP_957614.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
gi|120323112|gb|ABM17427.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 348
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 52/153 (33%), Gaps = 14/153 (9%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP-------ML 96
+ + L V +GD + + L ++ +L
Sbjct: 199 QQYQSEFFARLRDILAGNE-NVRIVGDRFLLP-SELLFASASAELGEEGRQELDKLADLL 256
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFI 152
+++ + ++ I HTD + N +S RA + YL R +
Sbjct: 257 LDVSSRIPDDVDWILRIDGHTDMLPINTQRFPSNWELSTARAVAVVRYLATE-GVPERRM 315
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ GF +P+ + Q N+RIE+++ R
Sbjct: 316 AAAGFGEFFPVADGTSPEALQRNRRIELKLTDR 348
>gi|269962097|ref|ZP_06176451.1| sodium-type flagellar protein MotY [Vibrio harveyi 1DA3]
gi|269833181|gb|EEZ87286.1| sodium-type flagellar protein MotY [Vibrio harveyi 1DA3]
Length = 293
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 87 FLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L K L IA + ++ + ++TDS + +S+ RA+ +++Y G
Sbjct: 193 QLTKASKKRLSQIADYVRHNQDIDLVLVATYTDSTDGKSASQSLSERRAESLRTYFESLG 252
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S +R I V+G+ + PI N + +G+ N+R+ I +
Sbjct: 253 LSGDR-IQVQGYGKRRPIADNGSPIGKDKNRRVVISL 288
>gi|229903070|ref|ZP_04518186.1| Outer membrane protein [Yersinia pestis Nepal516]
gi|229679980|gb|EEO76080.1| Outer membrane protein [Yersinia pestis Nepal516]
Length = 71
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ S +V+G+ PI NDT GR N+R+EI + P+ +
Sbjct: 1 MLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISLVPQAD 47
>gi|167762473|ref|ZP_02434600.1| hypothetical protein BACSTE_00828 [Bacteroides stercoris ATCC
43183]
gi|167699579|gb|EDS16158.1| hypothetical protein BACSTE_00828 [Bacteroides stercoris ATCC
43183]
Length = 224
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 40/222 (18%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR------------------- 42
+K + + CG + K + +
Sbjct: 4 MKMTAFLLSGAILLGSCGTMNNTTKGGIIGGGSGAAAGAIIGGLFGKGKGAAIGAAVGAA 63
Query: 43 --------FGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSF-VSEVFLEK 90
G +DK + +++ + + + + + + F + L
Sbjct: 64 VGTGAGVAIGHKMDK-KAAEAAKIEGAQVEMVKDANNLDAVKVTFDSGILFTFNSSTLSN 122
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L+ +A IL + +T IAI HTD +GT + N+ +S+ RA +++YL GVS ++
Sbjct: 123 DAKASLRDLAKILKEDTTTDIAIIGHTDKVGTYEANMKVSKNRAYAVENYLQDCGVSPSQ 182
Query: 151 FISVRGFAYKYPIDTNDTKVGR--QNNQRIEIQIFPRGNIKK 190
F V G Y N+ N+R+ I ++ + K
Sbjct: 183 FKQVEGVGY------NEYDESLSASENRRVVIFMYASEQMIK 218
>gi|269960160|ref|ZP_06174536.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835131|gb|EEZ89214.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 345
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L + + + + ++ T I + HTD++G+ NL +S++RA+ +
Sbjct: 212 FQFGQKTLSRSQQSTIAALYSYISVDDRVTKILVDGHTDNVGSQLANLTVSRQRAEQVAD 271
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
L+Q+GV + I VR +YPI +N+T+ G+ N+R+ +++ R N +
Sbjct: 272 ALVQQGVDRS-LIEVRAHGSRYPIASNNTQAGQAKNRRVTLRLV-RDNER 319
>gi|93005424|ref|YP_579861.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
gi|92393102|gb|ABE74377.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
Length = 232
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 59/196 (30%), Gaps = 29/196 (14%)
Query: 8 SMFIMTTISGCGLASREKKKVFLH-----------KSNDTDIVNKRFGSSLDKAEDEFQM 56
+ ++ C D D V + + E
Sbjct: 11 VVIASFMLASCQSTPETAVINGKPYIPPKVLIEPLADTDNDGVPDIIDNCPNTPEGVMTD 70
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + VS IG + + V F + L+ K+LP ++ +A ++ P V+ +
Sbjct: 71 EY-GCPVAVSLIG---YLTMELRVFFERNSNELQTKYLPEVEKVAEKMHSNPELVVVLSG 126
Query: 116 H-------------TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
H + K + I + + + I A P
Sbjct: 127 HTSELEAAHASGDIYGEMNQEKVDKRQLGRDRAQIIKTALVKRNIATDKIYTFDCADSMP 186
Query: 163 IDTNDTKVGRQNNQRI 178
I NDT+ GR NQRI
Sbjct: 187 IAPNDTEEGRSMNQRI 202
>gi|325267033|ref|ZP_08133703.1| OmpA family protein [Kingella denitrificans ATCC 33394]
gi|324981533|gb|EGC17175.1| OmpA family protein [Kingella denitrificans ATCC 33394]
Length = 240
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 68/194 (35%), Gaps = 21/194 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-----SLDKAEDEFQ 55
M K + S I+ ++ G A + ++V +G L+KAE+
Sbjct: 20 MTKHVKASALIVALLASTG-AMAHGTHGYTVSEQSGEVVRNNYGECWENTYLNKAENGLV 78
Query: 56 M------QLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
+ +V T + + F + L + + L +A L
Sbjct: 79 ECGDRAPETAPAPVVQQPQYRTETVSLNSNFLFGFDKDTLRPEAIETLNQLAARLGDSNV 138
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++ HTD +G+ + N +S+ RA + +YL++R IS G T
Sbjct: 139 QSARVEGHTDFMGSEQYNQALSERRATRVANYLVER-GVPASKISAAGLGESQARM---T 194
Query: 169 KVGRQN-N---QRI 178
+ N +R+
Sbjct: 195 ASCQAEVNKLGRRV 208
>gi|332293580|ref|YP_004432189.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332171666|gb|AEE20921.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 368
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 55/158 (34%), Gaps = 7/158 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
D + ++ D E Q ++ + L
Sbjct: 212 KDATTTEEVVAATFDTVSKEVLKQKGGLTTWREVECALVEYQALPINWNTNSATLTPAAK 271
Query: 94 PMLQ-LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
++ + +L + P + I SHTDS G +N +S+ RA + +YLI + +N +
Sbjct: 272 SIIDTRLMPLLAQNPGVKLEIASHTDSRGASSSNQDLSERRAQSVANYLISK-GVNNSLL 330
Query: 153 SVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
GF + + T+ +N+R E ++
Sbjct: 331 VANGFGERKLKNRCADGVSCTERQHADNRRTEFRLINN 368
>gi|297538146|ref|YP_003673915.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
gi|297257493|gb|ADI29338.1| OmpA/MotB domain protein [Methylotenera sp. 301]
Length = 378
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 8/111 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADV 136
+ + L+ P+L + P + + HTD IG+ N +S++RA +
Sbjct: 259 EKLFGFDKAKLQDGAKPILDDTVAKIKANPELKTVIVTGHTDRIGSTAYNQKLSEKRASI 318
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR------QNNQRIEIQ 181
+K YL+ + I+ G P++ G+ N+R+ I
Sbjct: 319 VKEYLVSQ-GVDAGIITSVGKGESEPVEACKGVTGKKLISCLAPNRRVVIT 368
>gi|299773285|gb|ADJ38717.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKAIITCLAPDRRVEIQV 359
>gi|228018149|gb|ACP52753.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018157|gb|ACP52757.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018163|gb|ACP52760.1| fibronectin-binding protein [Campylobacter jejuni]
Length = 211
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ G T + H F + + F ++ IA +L++ ++ HTD+I
Sbjct: 104 EGALLDENGCEKTISLEGHFGF-DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI 162
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
G+ N +S+ RA + + +++ I G+ P +NDTK
Sbjct: 163 GSRAYNQKLSERRAKSVANE-LEKYGVEKSRIKTVGYGQDNPRSSNDTKE 211
>gi|228018139|gb|ACP52748.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018141|gb|ACP52749.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018143|gb|ACP52750.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018145|gb|ACP52751.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018147|gb|ACP52752.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018151|gb|ACP52754.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018153|gb|ACP52755.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018155|gb|ACP52756.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018159|gb|ACP52758.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018161|gb|ACP52759.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018165|gb|ACP52761.1| fibronectin-binding protein [Campylobacter jejuni]
Length = 211
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ G T + H F + + F ++ IA +L++ ++ HTD+I
Sbjct: 104 EGALLDENGCEKTISLEGHFGF-DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI 162
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
G+ N +S+ RA + + +++ I G+ P +NDTK
Sbjct: 163 GSRAYNQKLSERRAKSVANE-LEKYGVEKSRIKTVGYGQDNPRSSNDTKE 211
>gi|304319913|ref|YP_003853556.1| flagellar motor protein [Parvularcula bermudensis HTCC2503]
gi|303298816|gb|ADM08415.1| flagellar motor protein [Parvularcula bermudensis HTCC2503]
Length = 343
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 65/189 (34%), Gaps = 19/189 (10%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ---DTGIVVSRIGD 70
+ E++ + S + R + L + +F QL + R GD
Sbjct: 157 ALEAAEAKDVEQQAQIENLSQRLNAALARRVNELARVRSDFLEQLAAALEGRPGFRRDGD 216
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-------STVIAIQSHTDSIGT- 122
+ L +L+ +A +N V+ + H D +
Sbjct: 217 R-YIVEGDVLFGSCSTELTPAARDVLRTVAAAINDVRRDLDTDYEWVLRVDGHADQVPLG 275
Query: 123 ------LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+NL +S RA + +L +GV ++R ++ GF YP+ N+
Sbjct: 276 AACRALFDSNLQLSTRRALSVVEFLSSQGVPADRLVAA-GFGDAYPLVAGRDPASLAQNR 334
Query: 177 RIEIQIFPR 185
RIE ++ R
Sbjct: 335 RIEFKLTER 343
>gi|42521052|ref|NP_966967.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
endosymbiont of Drosophila melanogaster]
gi|99034094|ref|ZP_01314208.1| hypothetical protein Wendoof_01001001 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|42410793|gb|AAS14901.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
endosymbiont of Drosophila melanogaster]
Length = 159
Score = 64.7 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 36/114 (31%), Gaps = 7/114 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
E + + L + +L P + + HTD+ G+ + NL + R
Sbjct: 39 IGDKRVFFGYDESSIAEVSADALLDVMEVLQDNPDAKVTLTGHTDNRGSHEYNLALGARR 98
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-------KVGRQNNQRIEI 180
AD K +++ I P+ + N+R+E
Sbjct: 99 ADAAKKFMVSCTPYIENRIKTASKGETEPLVNVKDDSRNSKYEKEHAKNRRVEF 152
>gi|146300540|ref|YP_001195131.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146154958|gb|ABQ05812.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 303
Score = 64.7 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 62/164 (37%), Gaps = 4/164 (2%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ K+ + D + + A+ + + + + D +T +
Sbjct: 143 SSQLDTEGKIINSWETNADTLIGPVEYKFETADTTSAVTDEWSALKDKINADPLTLHFNT 202
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ S L + I+ L + + I H+D++G + N++++Q+RAD K
Sbjct: 203 N---KSSFNLTNDEKQKVSDISKYLENVKNASVLIVGHSDNVGNRELNIVLAQKRADFTK 259
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+YLI + I P N T G+ +N+R I I
Sbjct: 260 NYLI-KNGIEASRIETESKGPDEPAGDNTTAEGKASNRRTVITI 302
>gi|120603975|ref|YP_968375.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|120564204|gb|ABM29948.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
Length = 259
Score = 64.7 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 48/231 (20%), Positives = 87/231 (37%), Gaps = 43/231 (18%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE--DEFQMQL 58
M+ L L +FI+T I + E+ + K T+ ++ + +AE + L
Sbjct: 27 MMSGL-LFIFIITLIVFVINFNMERIEAAEQKQELTEKYDELTNARKTRAEMLTSLERSL 85
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL-------------- 103
+ G+ VS D +IP + F L + L +IA L
Sbjct: 86 KMKGVEVSIDKDHGLLHIPEGILFDSGSAALPPEGGRTLDIIAEQLSTLLPCYSGKADAP 145
Query: 104 -------NKFPSTV--IAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQR----- 144
N P + + ++ HTD++ ++N +S +RA +L+
Sbjct: 146 APDECRDNYKPGRLEAVFVEGHTDNVPMPPRGGIQDNWDLSTKRAVTTYRHLLGHAPTLA 205
Query: 145 ---GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF---PRGNIK 189
+ + V G+A P + +DT N+RI+++ PRG K
Sbjct: 206 AFVNLDGDPLFGVSGYAASRPRNPHDTPTPDAQNRRIDLRFLLAAPRGQDK 256
>gi|261253024|ref|ZP_05945597.1| outer membrane protein [Vibrio orientalis CIP 102891]
gi|260936415|gb|EEX92404.1| outer membrane protein [Vibrio orientalis CIP 102891]
Length = 279
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + K++ L + IL + P +A+ H DS+G + N ++ RA +
Sbjct: 157 DNQFAFNSTEINPKYMGHLAEASNILKQHPQFHLAVTGHADSVGDVSYNQELAMGRAQQV 216
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K YL G+S +R I + P+ D+ R N+R+ I++
Sbjct: 217 KRYLTIFGLSPSR-IQTKSVGDTLPLYEGDSDGVRLTNRRVSIEVI 261
>gi|42521994|ref|NP_967374.1| outer membrane protein A [Bdellovibrio bacteriovorus HD100]
gi|39574525|emb|CAE78367.1| outer membrane protein A [Bdellovibrio bacteriovorus HD100]
Length = 171
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 61/182 (33%), Gaps = 21/182 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ S+ ++ + C ++++ + + + + G++ D + L
Sbjct: 8 KIAASLTLVLALGACSSKTKKEDENVIGQRGGRAPDSALSGAAGDLRKSSKFSTLSQ--- 64
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIG 121
V L L IA+ L ++ I I TD G
Sbjct: 65 --------------NIRFNVGSSELNASSRRALNEIASELKNTANSYEKIRISGLTDPQG 110
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL +S+ RA ++ YL+ R + G DT T ++R++ +
Sbjct: 111 DADRNLRLSEARATRVRDYLVSR-GVPEDKLETVGKGAVA-RDTLGTSSQMARDRRVDFE 168
Query: 182 IF 183
I
Sbjct: 169 IV 170
>gi|299773277|gb|ADJ38713.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359
>gi|288225941|gb|ADC44455.1| OmpA [Candidatus Erwinia dacicola]
gi|288225945|gb|ADC44457.1| OmpA [Candidatus Erwinia dacicola]
Length = 324
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + +TD IG+ + N +S++RA
Sbjct: 197 SDVLFNFNKNTLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRIGSEQYNQKLSEKRA 256
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +L+ + I RG PI T D+ GR ++R+EI++
Sbjct: 257 QSVVDHLVSK-GIPASKIYARGKGKSNPIIGSTCDSVKGRNALIDCLAPDRRVEIEV 312
>gi|218709511|ref|YP_002417132.1| outer membrane protein [Vibrio splendidus LGP32]
gi|218322530|emb|CAV18689.1| Outer membrane protein [Vibrio splendidus LGP32]
Length = 278
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 53/155 (34%), Gaps = 12/155 (7%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + + + + + + + K++
Sbjct: 120 LNELEVQLDYVTSQARCEPPKNENQFRMQLSVIEQLYDLLNVDNQFAENSTEVNPKYMGR 179
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L T+L + S + + H D+ GT + N ++ RA ++ + + I
Sbjct: 180 LAEATTLLKENKSLDLVVTGHADATGTEEYNDDLALGRAKQVER-YLTIFGLGVQRIKAV 238
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
P+ ++ R N+R+ I++ N +K
Sbjct: 239 SVGETVPLFEGESDGTRLTNRRVSIEVISPKNAEK 273
>gi|330997212|ref|ZP_08321065.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
gi|329571007|gb|EGG52714.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
Length = 377
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 55/145 (37%), Gaps = 3/145 (2%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFG-SSLDKAEDEFQMQLQD--TGIVVSRIGDMIT 73
GC A + S + + K + K ++ Q L D V + +
Sbjct: 214 GCSHADQIAALNATISSMEAEAAGKDRALQNAQKTINDLQKDLNDCKNKKVPTTATQTVE 273
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
V + S ++ +P + +A+ L K + + I + G K N +S++R
Sbjct: 274 KNEYVVIFRQSSSKVDALQMPNIDRLASYLKKNSNAKVTISGYASPEGNAKFNQKLSEKR 333
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFA 158
A+ +K+ L++ S I +G
Sbjct: 334 AEAVKNILVKEYGISANRIETQGKG 358
>gi|242309734|ref|ZP_04808889.1| chemotaxis protein motB [Helicobacter pullorum MIT 98-5489]
gi|239523735|gb|EEQ63601.1| chemotaxis protein motB [Helicobacter pullorum MIT 98-5489]
Length = 258
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 60/174 (34%), Gaps = 9/174 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ + ++ +SL +E + I IP +
Sbjct: 71 PPQPIQATPIQAETEMDNVMNIFASLITEYNEINKLANGPAVEFEEAEKGIIIRIPEDLL 130
Query: 82 FV-SEVFLE-KKFLPMLQLIATILNKFP-STVIAIQSHTDSIGT-----LKNNLLISQER 133
F L + L+ I+ LN P +I HTD+ +NL +S R
Sbjct: 131 FESGSATLSNSNGITFLKRISLELNHLPKEILIKAIGHTDNTPMKKNATFADNLELSIAR 190
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ + LI +G+ R I G PI ND R N+R+++ ++ G
Sbjct: 191 GVNVANLLISQGIDKERIIG-GGEGEFSPIANNDIPELRAKNRRVDLYVYSIGE 243
>gi|157962391|ref|YP_001502425.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157847391|gb|ABV87890.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 289
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
V L + + + L + ++ I ++TDS G N +S++
Sbjct: 177 IAFTVLTYESGGTELTRYAKSQIARVQEYLAYDQNVDLVLIDAYTDSYGGRSINQKVSEQ 236
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD +K + + I G K + +N T R N+R+ I+I
Sbjct: 237 RADSVKDFFVA-SGIGQNRIHTMGHGEKRHVASNQTIDERSRNRRVVIRI 285
>gi|56479209|ref|YP_160798.1| lipoprotein [Aromatoleum aromaticum EbN1]
gi|56315252|emb|CAI09897.1| hypothetical protein, possible lipoprotein [Aromatoleum aromaticum
EbN1]
Length = 226
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L + L L + I I TDS G L N ++ RA ++ +
Sbjct: 119 FALGSAKLSRAARSQLNAAMDDLLQV--RRITIIGRTDSTGPLAFNQDLALARALAVRDH 176
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L + + +++R I NDT GR N+R+E+
Sbjct: 177 LRRTHPALAATLTLRARGACCFIAPNDTLAGRAQNRRVEVV 217
>gi|319954930|ref|YP_004166197.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319423590|gb|ADV50699.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 366
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 7/108 (6%)
Query: 84 SEVFLEKKFLPMLQ-LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L + ++ + +L + P + + SHTDS G +N +S+ RA + YLI
Sbjct: 260 GSATLTSEAKSIIDNRLMPVLAQNPGVKVELASHTDSQGASSSNQDLSERRAKAVADYLI 319
Query: 143 QRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
+ ++ + G+ ++ T N+R + ++
Sbjct: 320 SK-GVNSSLLVANGYGETKLLNRCKDGVSCTAREHAANRRTQFRLINN 366
>gi|299773291|gb|ADJ38720.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357
>gi|71908258|ref|YP_285845.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71847879|gb|AAZ47375.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 225
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L L + T L + I I TD+ G L N ++ RA ++ +
Sbjct: 118 FGLGSAKLSPAAHTSLNEVMTALLS--ARQITIIGRTDNTGPLAFNESLALARALAVRDH 175
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
LI++ +SV+ I NDT GR N+R+E+ R ++
Sbjct: 176 LIKKYPRLMPTLSVKARGACCFIAANDTLAGRTQNRRVELVFDLRDKVQ 224
>gi|303237447|ref|ZP_07324013.1| OmpA family protein [Prevotella disiens FB035-09AN]
gi|302482397|gb|EFL45426.1| OmpA family protein [Prevotella disiens FB035-09AN]
Length = 226
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 76/217 (35%), Gaps = 33/217 (15%)
Query: 2 IKELGLSMFIMTTISGCGLASRE--------------------------KKKVFLHKSND 35
+K + + T I+ C + +
Sbjct: 4 LKTIAAGLCAATLITSCATNQQTYGAGGAGAGAVVGGIIGQIIGKDTKGTMIGAAIGAAV 63
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFVSEVFLEKKF 92
G +DK + ++++ + ++ + + + F +
Sbjct: 64 GAGTGAIIGRHMDKVAAQTAAKVENAKVEKTKDANGLDCVKVTFDSGILFATNSSSLSAA 123
Query: 93 LPM-LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L A +L + +AIQ +TD+ G NL +S++RA + SYL +GV + +
Sbjct: 124 SKKDLNNFAGVLKQNRDCDVAIQGYTDASGNDNINLPLSEKRATAVSSYLRAQGVPAGQI 183
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+V G PI + K Q N+R+E+ ++ ++
Sbjct: 184 RTVEGLGSANPI---ENKRISQANRRVEVYMYASKDM 217
>gi|282881633|ref|ZP_06290296.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
gi|281304392|gb|EFA96489.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
Length = 717
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 36/154 (23%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ I + L + L + +LN+ I + +H D G+ + N ++Q
Sbjct: 542 VPVLIDNIFYDFDKATLRLESKKALDDLVKLLNENSHVTIELSAHCDYKGSKEYNQRLAQ 601
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYP---------------------------ID 164
RA+ + YLI + + + G+ + P +D
Sbjct: 602 RRAEAVVRYLIDK-GIAKDRLKPVGYGKEKPKTIRKKLTERYPWLKEGDVLSEEFIKTLD 660
Query: 165 TNDTKVGRQNNQRIEIQIF--------PRGNIKK 190
++ Q N+R E + +G +KK
Sbjct: 661 AEKQEICNQLNRRTEFSVLRTTYNMFDEQGKLKK 694
>gi|254208912|ref|ZP_04915260.1| OmpA family protein [Burkholderia mallei JHU]
gi|147750788|gb|EDK57857.1| OmpA family protein [Burkholderia mallei JHU]
Length = 193
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 9/121 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + V+ +TD IG+ K N +S RA +
Sbjct: 68 DTLFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAV 127
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK--------VGRQNNQRIEIQIFPRGNIK 189
KSYL+ + + G + P+ N K ++R+E+++ ++
Sbjct: 128 KSYLVSK-GVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGTQEVQ 186
Query: 190 K 190
K
Sbjct: 187 K 187
>gi|296389028|ref|ZP_06878503.1| putative ABC-type periplasmic phosphate-binding protein
[Pseudomonas aeruginosa PAb1]
Length = 461
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 5/149 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ R G K + ++ + L+ K L
Sbjct: 315 GQAIVTRSGFVAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFRFQEGSALLDNKALLD 374
Query: 96 LQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+Q + L + + D + ++L+S+ RA ++ L + GVS
Sbjct: 375 VQRLLDYLRQNQKLQERTVLVGFGDPKSDAERSVLLSRLRAMAVRRELARGGVSFR---E 431
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ GF + P+ +ND ++GRQ N+R+E+ +
Sbjct: 432 IAGFGDELPVASNDQELGRQKNRRVEVWV 460
>gi|257482065|ref|ZP_05636106.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 163
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 50/157 (31%), Gaps = 38/157 (24%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK--------------------- 41
+ L + + +SGC ++ + S K
Sbjct: 5 RRLIIVATAVAMLSGCATSNPYDNQGQAQSSGGMSKTAKYGGLGALAGAVAGAAIDHNHR 64
Query: 42 ----------------RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
+G DK E + + +TG+ V R GD I +P +++F
Sbjct: 65 GKGALIGAAVAGAASAGYGYYADKQEAALRASMANTGVEVQRQGDQIKLIMPGNITFATD 124
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ F L +A L +F I I +TDS G
Sbjct: 125 SSAIASSFYSPLNNLANSLKQFNQNNIEIVGYTDSTG 161
>gi|330960099|gb|EGH60359.1| flagellar motor protein MotB [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 341
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 64/183 (34%), Gaps = 15/183 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ + +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPIEAETSETKAEAVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNL 127
I + L+ F +L +A + P+ I+I HTD+ N
Sbjct: 158 IMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN-KISISGHTDATPFVGSGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S RA+ + L+ ++ V G+A + ++ N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDHENPTN-PVNRRIDIVVLTKKA 274
Query: 188 IKK 190
++
Sbjct: 275 QQR 277
>gi|312270727|gb|ADQ55764.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357
>gi|312270725|gb|ADQ55763.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357
>gi|254181081|ref|ZP_04887679.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|254195586|ref|ZP_04902013.1| ompA family protein [Burkholderia pseudomallei S13]
gi|169652332|gb|EDS85025.1| ompA family protein [Burkholderia pseudomallei S13]
gi|184211620|gb|EDU08663.1| ompA family protein [Burkholderia pseudomallei 1655]
Length = 188
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 9/121 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + V+ +TD IG+ K N +S RA +
Sbjct: 63 DTLFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAV 122
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK--------VGRQNNQRIEIQIFPRGNIK 189
KSYL+ + + G + P+ N K ++R+E+++ ++
Sbjct: 123 KSYLVSK-GVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGTQEVQ 181
Query: 190 K 190
K
Sbjct: 182 K 182
>gi|218887300|ref|YP_002436621.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758254|gb|ACL09153.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 307
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 63/199 (31%), Gaps = 32/199 (16%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF--------GSSLDKAEDEFQMQLQD 60
+ + +++G +E+ L + D V G L D +
Sbjct: 48 VMAVGSVAG--SFGQEQGTATLREPADGRPVPGIVPMGDAPPRGRDLTPLRDMLWED-AE 104
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILN--KFPSTVIAIQSHT 117
I G + I V F + L ++ +L IA +L + P + + H
Sbjct: 105 RDINYQENGYIQIFSINDEVLFRTGATELTERGAALLARIAPVLRGVEHP---VLVAGHA 161
Query: 118 DSIGTLK--------------NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ +S RA + L GV R + + P
Sbjct: 162 SPARDEEGILFRLRGDEKTLPTPWRLSLGRATAVYRRLADLGVPRGRML-IEAHGDTRPR 220
Query: 164 DTNDTKVGRQNNQRIEIQI 182
N T GR+ N+R++I +
Sbjct: 221 FDNLTPEGRRANRRVDIVL 239
>gi|149185364|ref|ZP_01863681.1| outer membrane protein [Erythrobacter sp. SD-21]
gi|148831475|gb|EDL49909.1| outer membrane protein [Erythrobacter sp. SD-21]
Length = 218
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 11/162 (6%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPM 95
+ ++ D F+ + G V + + +SF + L +
Sbjct: 28 EEAPDPAATADDGPRSIFREDPAEAGEGV--LPAPTLPPLETTLSFADGMPELTEAVRAE 85
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L I I ++ H+DS G+ ++NL S+ERA+ ++ + ++ G+ R I+V
Sbjct: 86 LATIVDSPQMEAGGAIVLRGHSDSDGSDEDNLEASRERAEAVRDFFVENGIDEAR-ITVI 144
Query: 156 GFAYKYPIDTND------TKVGRQNNQRIEIQI-FPRGNIKK 190
F + P+ N + GR N+R+E+ I R +K
Sbjct: 145 AFGEQNPLAPNALPDGSPNEEGRATNRRVEVTIETGRNAERK 186
>gi|312270741|gb|ADQ55771.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357
>gi|254720768|ref|ZP_05182579.1| flagellar motor protein MotB [Brucella sp. 83/13]
gi|265985826|ref|ZP_06098561.1| flagellar motor protein MotB [Brucella sp. 83/13]
gi|264664418|gb|EEZ34679.1| flagellar motor protein MotB [Brucella sp. 83/13]
Length = 366
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 11/171 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV- 80
+ KK + D+ G A + + + V + + + V
Sbjct: 199 QAQPKKAETQEELIADLKKAATGEPAQNAGKAAKPEPMPD-VTVVPVEGGVMIQLTDKVD 257
Query: 81 ---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERA 134
+ + + + ML+ IA ++ + + I HTD+ +N +S RA
Sbjct: 258 YGMFTIGSAKPDARVVQMLERIAQVIARQLG-EVIISGHTDARPFKSATYDNWRLSSARA 316
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L++ G+ R + V G+A + P N T N+RI+I I +
Sbjct: 317 QMAYYMLVRGGLDEKRVLRVEGYADRQPK--NPTDPNAAENRRIDIFIKSK 365
>gi|150024643|ref|YP_001295469.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
JIP02/86]
gi|149771184|emb|CAL42651.1| Probable outer membrane protein, OmpA family [Flavobacterium
psychrophilum JIP02/86]
Length = 284
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 43/114 (37%), Gaps = 5/114 (4%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + L + ++ + P +I+I H + + +S +R
Sbjct: 174 LKLNNLNFITNTFAVTNDSRGKLYELLLVMQQRPEMIISIHGHLCCVSVDRK--DLSTQR 231
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT--NDTKVGRQNNQRIEIQIFPR 185
A +K ++ + +GF P+ +T+ R N+R+EI++
Sbjct: 232 AKAVKQ-FLELNGIEKTRMDFKGFGSSIPLFPLPENTEEERAANRRVEIEVIEN 284
>gi|332534626|ref|ZP_08410458.1| putative component of sodium-driven polar flagellar motor
[Pseudoalteromonas haloplanktis ANT/505]
gi|332035906|gb|EGI72387.1| putative component of sodium-driven polar flagellar motor
[Pseudoalteromonas haloplanktis ANT/505]
Length = 292
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V + L K L IA L S I+I S+TDS G NNL +S++
Sbjct: 181 ISFTVMNYQSNSSKLTKSSQQRLDKIAEYLKNDASIESISIDSYTDSYGGRWNNLDLSRK 240
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA IK Y++ + G K +D ND +GR N+R+ IQI
Sbjct: 241 RAKTIKDYMVSL-GVDEAKVQTTGLGEKRFVDNNDNILGRDKNRRLIIQI 289
>gi|299773283|gb|ADJ38716.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359
>gi|299773257|gb|ADJ38703.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357
>gi|209968926|gb|ACJ02824.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714285|gb|ACN62137.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357
>gi|85373329|ref|YP_457391.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594]
gi|84786412|gb|ABC62594.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594]
Length = 167
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 20/168 (11%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
S CG E+ + + G + D Q G Y
Sbjct: 18 SACGKKDIEELPI--PGDAPPASTGQTSGIAPGSQADFMQQM-----------GGKEIIY 64
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ ++ L+++P I+ H D GT + NL + + RA+
Sbjct: 65 FDTDRFNIDDIDAAALQQQA-----QWLSQYPGKRATIEGHADERGTREYNLALGERRAN 119
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IEIQI 182
K+YL G+ ++R +SV + + P+ + N+R + + I
Sbjct: 120 AAKNYLASLGIDTSR-LSVISYGEERPVALGSDQAAWSQNRRAVTVTI 166
>gi|323499085|ref|ZP_08104065.1| outer membrane protein [Vibrio sinaloensis DSM 21326]
gi|323315920|gb|EGA68951.1| outer membrane protein [Vibrio sinaloensis DSM 21326]
Length = 278
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + K++ L A IL + PS +++ H DS+G ++ N ++ +RA +
Sbjct: 157 DNQFAFNSAEINPKYMGHLAKAANILTEHPSLALSVTGHADSVGDIEYNQNLAMDRAQQV 216
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K + S I P+ +++ R N+R+ I++
Sbjct: 217 KR-YLSIFGLSPTRIETHSVGDTLPLYEGESEGVRLTNRRVSIEVV 261
>gi|306840141|ref|ZP_07472926.1| flagellar motor protein MotB [Brucella sp. NF 2653]
gi|306404786|gb|EFM61080.1| flagellar motor protein MotB [Brucella sp. NF 2653]
Length = 366
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 11/171 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV- 80
+ KK + D+ G A + + + V + + + V
Sbjct: 199 QAQPKKAETQEELIADLKKAATGEPAQNAGKAAKPEPMPD-VTVVPVEGGVMIQLTDKVD 257
Query: 81 ---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERA 134
+ + + + ML+ IA ++ + + I HTD+ +N +S RA
Sbjct: 258 YGMFTIGSAKPDARVVQMLERIAQVIARQLG-EVIISGHTDARPFKSATYDNWRLSSARA 316
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L++ G+ R + V G+A + P N T N+RI+I I +
Sbjct: 317 QMAYYMLVRGGLDEKRVLRVEGYADRQPK--NPTDPNAAENRRIDIFIKSK 365
>gi|269122521|ref|YP_003310698.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
gi|268616399|gb|ACZ10767.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
Length = 358
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ V + L+ IA ILN I + HTDS G+ N +S ERA
Sbjct: 238 NGFKVDGKVPNEAEQRDLRTIANILNAAVVDGGTINVVGHTDSTGSAAYNQKLSVERAQN 297
Query: 137 IKSYLIQRGVSSNRFI-SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI----FPRGNIK 189
+ L + G+ + ++ G P+ TN+T GR N+R+E+ F + N+K
Sbjct: 298 VARLLREYGLKNTVKFGTITGKGLTQPMATNNTVEGRYQNRRVELFFDRVDFSKANVK 355
>gi|307132015|ref|YP_003884031.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937]
gi|306529544|gb|ADM99474.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937]
Length = 353
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD +G+ + N +S +RA
Sbjct: 226 SDVLFNFNKATLKPEGQRSLDQLYSQLSTLDPKDGSVVVLGFTDRLGSDQYNQTLSTKRA 285
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + IS RG P+ T R ++R+EI++
Sbjct: 286 QTVVDYLVHK-GIPANKISARGMGKANPVSGSTCTNVKARAALIDCLAPDRRVEIEV 341
>gi|186472020|ref|YP_001859362.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184194352|gb|ACC72316.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 371
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + + ++A+ L + + V+ + +TD G++ +N +S+ RA
Sbjct: 204 DALFDFDSAKLKAEGFEAVDVLASNLKRVKAIDVVTVIGYTDRFGSVAHNRDLSRRRAQA 263
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK------VGRQNNQRIEIQI 182
+ +++ VRG P+ T N+R+EI++
Sbjct: 264 VAD-ALKQRGVDPGHFDVRGAGSTAPVVTCPGPKKPAVIECLAPNRRVEIRV 314
>gi|221209716|ref|ZP_03582697.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
gi|221170404|gb|EEE02870.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
Length = 405
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 7/139 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFP- 107
E + ++ + + R + FV + ++ +
Sbjct: 266 LEQRLRDEVAAGNVELIRDPARHVLTLRFAGMFVPGAMTVAPWGASVVASAGREIASIAE 325
Query: 108 STVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
V+ + + DS +N IS+ RA+ + L+ + V G +
Sbjct: 326 GAVVRVVGYADSAPAGSARQVSNQAISEARAEDVARILVAA-GVPAHGLRVEGRGDADAL 384
Query: 164 DTNDTKVGRQNNQRIEIQI 182
N T+ GR N+R+E+ +
Sbjct: 385 ADNGTESGRARNRRVEVIV 403
>gi|34540795|ref|NP_905274.1| OmpA family protein [Porphyromonas gingivalis W83]
gi|5081701|gb|AAD39496.1|AF145800_1 immunogenic 75 kDa protein PG4 [Porphyromonas gingivalis]
gi|34397109|gb|AAQ66173.1| OmpA family protein [Porphyromonas gingivalis W83]
Length = 672
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 43/139 (30%), Gaps = 30/139 (21%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + L + + L + IL P I + SH D G NL +S RA
Sbjct: 534 LQNIFYDFDKATLRPESMKSLDELIRILTDNPDIRIELGSHADRKGPDAYNLGLSDRRAK 593
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYP------------------------IDTNDTKV- 170
+ YL R + ++ +G+ P + T+
Sbjct: 594 SVVDYLTSR-GIAADRLTWKGYGKSVPKTVTAKIAERHDFLKEGDVLTEEFVAP-LTEEQ 651
Query: 171 ---GRQNNQRIEIQIFPRG 186
Q N+R E ++
Sbjct: 652 QSVCDQLNRRTEFRVIEEE 670
>gi|299773261|gb|ADJ38705.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773267|gb|ADJ38708.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359
>gi|209968936|gb|ACJ02829.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968942|gb|ACJ02832.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968946|gb|ACJ02834.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968956|gb|ACJ02839.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968958|gb|ACJ02840.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714295|gb|ACN62142.1| outer membrane protein A [Haemophilus parasuis]
gi|312270743|gb|ADQ55772.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357
>gi|299773289|gb|ADJ38719.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVFK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359
>gi|299773251|gb|ADJ38700.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357
>gi|224714311|gb|ACN62150.1| outer membrane protein A [Haemophilus parasuis]
Length = 367
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359
>gi|299773263|gb|ADJ38706.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359
>gi|291334148|gb|ADD93818.1| outer membrane protein [uncultured marine bacterium
MedDCM-OCT-S05-C362]
Length = 269
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 22/179 (12%), Positives = 52/179 (29%), Gaps = 13/179 (7%)
Query: 14 TISGCGLASREKKKVFLHKSNDT-----DIVNKRFGSS-----LDKAEDEFQMQLQDTGI 63
++ + ++ + ++ + + + D+ E + G+
Sbjct: 90 LLTALKMGVKDTLPEAMAEAVVGFDCWVEQAEEGWQYEHIKTCRDRFEMAMDRIQEKVGL 149
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
++ + V + + L + + + H D GT
Sbjct: 150 TITDEAE--AERKIVIYYDHDSSDISPEDQAYLSAEVGRIPMHDKVSLTVVGHADRTGTE 207
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ N +S ERA + + + +R I V P N+R E+ I
Sbjct: 208 RYNHDLSVERAIGVHR-ALSQYGIGDRSIGVSAKGETVPAIPTSDGQSEPRNRRSEVLI 265
>gi|209968962|gb|ACJ02842.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357
>gi|299136066|ref|ZP_07029250.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
gi|298602190|gb|EFI58344.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
Length = 269
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 56/175 (32%), Gaps = 11/175 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF----------QMQLQDTGIVVSRIG 69
A++++ K + +D + + + + +
Sbjct: 88 AAAQDQLKSDRKDIEQNQQDTAKNSQDIDTTKQGLAVTTADTATNKQAIGQANQRFTTLD 147
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + KK L P +I +Q + ++G+ N +
Sbjct: 148 QYEDKGSITVNFANGKATVSKKDKDQLTDFVKSAANTPGYMIEVQGYASAVGSAALNQRL 207
Query: 130 SQERADVIKSYLIQRGVS-SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S ERAD + + + Q GV R ++ P+ + T+ N+R+ + I
Sbjct: 208 SSERADAVLAIIQQTGVVPMTRILAPAAMGTTNPVSEDHTRSAHAQNRRVVVTIV 262
>gi|238749729|ref|ZP_04611234.1| Outer membrane protein A [Yersinia rohdei ATCC 43380]
gi|238712384|gb|EEQ04597.1| Outer membrane protein A [Yersinia rohdei ATCC 43380]
Length = 358
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + D IG NL +SQ RA
Sbjct: 231 SDVLFAFNKSTLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQRRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
D ++ YL+ + I+ RG P+ N ++R+EI++
Sbjct: 291 DSVRDYLVSK-GIPADKITARGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIEV 346
>gi|254480140|ref|ZP_05093388.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
gi|214039702|gb|EEB80361.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
Length = 213
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 13/156 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ E+ L I + D + ++ L+ + +L +
Sbjct: 55 EAEQDRRMVLEEALAAPLASGRITLR---DGRIGISGSVLFALNSDQLQAEGRELLSSLI 111
Query: 101 TILNKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L + + ++ + TD + +N +S +RA + LI+
Sbjct: 112 PPLKLYLLEQNDLLMVSGFTDDLPIQDGNLHFNDNWELSAQRALTVTRALIEE-GMPPSL 170
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ F + P+ N R N+R+E+ PR +
Sbjct: 171 VFAAAFGAEQPVVANTDSESRSRNRRVEMAPVPRAS 206
>gi|299773253|gb|ADJ38701.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|254486323|ref|ZP_05099528.1| OmpA/MotB [Roseobacter sp. GAI101]
gi|214043192|gb|EEB83830.1| OmpA/MotB [Roseobacter sp. GAI101]
Length = 231
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ +L+ A + +FP + HTD++G+ ++N + RA + ++
Sbjct: 89 FDFNSSQLDAAAQAILRQQANWIRQFPEVRFRVYGHTDAVGSNRSNKALGLRRARSVVAF 148
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-NQR 177
L +G+S++R +V F P+ GR+ N+R
Sbjct: 149 LTTQGISTSRLEAVVSFGETQPLIVT---QGRERANRR 183
>gi|58698495|ref|ZP_00373400.1| peptidoglycan-associated lipoprotein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630914|ref|YP_002727705.1| peptidoglycan-associated lipoprotein, putative [Wolbachia sp. wRi]
gi|58534989|gb|EAL59083.1| peptidoglycan-associated lipoprotein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225592895|gb|ACN95914.1| peptidoglycan-associated lipoprotein, putative [Wolbachia sp. wRi]
Length = 159
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 36/114 (31%), Gaps = 7/114 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
E + + L + +L P + + HTD+ G+ + NL + R
Sbjct: 39 IGNKRVFFGYDESSIAEVSADALLDVMEVLQDNPDAKVTLTGHTDNRGSHEYNLALGARR 98
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-------KVGRQNNQRIEI 180
AD K +++ I P+ + N+R+E
Sbjct: 99 ADAAKKFMVSCTPYIENRIKTASKGETEPLVNVKDDSRNSKYEKEHAKNRRVEF 152
>gi|312270751|gb|ADQ55776.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359
>gi|312270745|gb|ADQ55773.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359
>gi|209968954|gb|ACJ02838.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357
>gi|229903102|ref|ZP_04518216.1| Outer membrane protein A precursor [Yersinia pestis Nepal516]
gi|229679844|gb|EEO75946.1| Outer membrane protein A precursor [Yersinia pestis Nepal516]
Length = 205
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 49/144 (34%), Gaps = 12/144 (8%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--P 107
ED + T + + ++ L+ + L + L+
Sbjct: 51 QEDAAAPIVAPTPAPAPIVDTKRFTLKSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPK 110
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ + D IG NL +SQ RAD ++ YL+ + I+ RG P+ N
Sbjct: 111 DGSVVVLGFADRIGQPAPNLALSQRRADSVRDYLVSK-GIPADKITARGEGQANPVTGNT 169
Query: 168 TK---------VGRQNNQRIEIQI 182
++R+EI++
Sbjct: 170 CDNVKPRAALIECLAPDRRVEIEV 193
>gi|224714275|gb|ACN62132.1| outer membrane protein A [Haemophilus parasuis]
Length = 367
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359
>gi|209968934|gb|ACJ02828.1| outer membrane protein P5 [Haemophilus parasuis]
gi|222831779|gb|ACJ23249.2| OmpA [Haemophilus parasuis]
gi|224714293|gb|ACN62141.1| outer membrane protein A [Haemophilus parasuis]
gi|224714317|gb|ACN62153.1| outer membrane protein A [Haemophilus parasuis]
gi|224714319|gb|ACN62154.1| outer membrane protein A [Haemophilus parasuis]
gi|224714321|gb|ACN62155.1| outer membrane protein A [Haemophilus parasuis]
gi|224714335|gb|ACN62162.1| outer membrane protein A [Haemophilus parasuis]
gi|299773259|gb|ADJ38704.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773265|gb|ADJ38707.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773271|gb|ADJ38710.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773273|gb|ADJ38711.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773275|gb|ADJ38712.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773279|gb|ADJ38714.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773287|gb|ADJ38718.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270747|gb|ADQ55774.1| OmpA [Haemophilus parasuis]
gi|312270749|gb|ADQ55775.1| OmpA [Haemophilus parasuis]
gi|312270753|gb|ADQ55777.1| OmpA [Haemophilus parasuis]
gi|312270755|gb|ADQ55778.1| OmpA [Haemophilus parasuis]
gi|312270757|gb|ADQ55779.1| OmpA [Haemophilus parasuis]
gi|312270759|gb|ADQ55780.1| OmpA [Haemophilus parasuis]
gi|312270761|gb|ADQ55781.1| OmpA [Haemophilus parasuis]
gi|312270763|gb|ADQ55782.1| OmpA [Haemophilus parasuis]
gi|312270765|gb|ADQ55783.1| OmpA [Haemophilus parasuis]
gi|312270767|gb|ADQ55784.1| OmpA [Haemophilus parasuis]
gi|312270769|gb|ADQ55785.1| OmpA [Haemophilus parasuis]
gi|312270771|gb|ADQ55786.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359
>gi|299773281|gb|ADJ38715.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKAIITCLAPDRRVEIQV 359
>gi|118591499|ref|ZP_01548896.1| hypothetical protein SIAM614_27927 [Stappia aggregata IAM 12614]
gi|118435827|gb|EAV42471.1| hypothetical protein SIAM614_27927 [Stappia aggregata IAM 12614]
Length = 193
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 64/190 (33%), Gaps = 12/190 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKS-NDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ +L L+ ++ + K+ ++ N ++ + D+ + +Q
Sbjct: 1 MNKLLLAGLSAAFLAVSASGLTAQTKLSRNEIINSLQGAQQKVDLTADELQQAALENIQK 60
Query: 61 -------TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVI 111
+ ++ + + + + + LIA L+
Sbjct: 61 YPGANAPNTLPLADKLASLRQFNVEITFDFDSARIRPESFETVGLIADALHTPYLQGQTF 120
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I HTD+ G + NL +S +RA ++ L+ ++ G + D +
Sbjct: 121 FIVGHTDAKGAREYNLELSLKRAQAVREALVTTFRVPGEYLFAVGLGEEQLRDPANPDA- 179
Query: 172 RQNNQRIEIQ 181
N+R+++
Sbjct: 180 -AVNRRVQLI 188
>gi|255036435|ref|YP_003087056.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254949191|gb|ACT93891.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 464
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ LE L L I + K + ++ HTD+ G+ + NL +S +R +
Sbjct: 354 LSTLYFSQGTEVLEDSALSDLDSIVSYFQKRQDLRLVLKGHTDNTGSFEKNLELSNKRVE 413
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+K+YLI +G+ + R I G+ P N T+ +++N+R+E+
Sbjct: 414 TVKAYLIGKGIIAER-IEGSGYGSAQPRQMNQTEATKKSNRRVEVW 458
>gi|209968902|gb|ACJ02812.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968930|gb|ACJ02826.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714289|gb|ACN62139.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357
>gi|126664984|ref|ZP_01735967.1| flagellar motor protein MotD [Marinobacter sp. ELB17]
gi|126630354|gb|EBA00969.1| flagellar motor protein MotD [Marinobacter sp. ELB17]
Length = 261
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 53/144 (36%), Gaps = 7/144 (4%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKK 91
+ D ++ + EF ++ I ++ + + +P + F +
Sbjct: 98 APDNASRSRALQELAGQLGQEFSALIEGGVISLNADDEWLQLNLPNSLLFGSGDAEPHYD 157
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVS 147
+++ IA +L + I I+ TD+ G +N +S RA + ++
Sbjct: 158 SFAVMEKIAGVLRDTDNA-IRIEGFTDNQSIRSGRFPSNWELSAARAS-VLVRMLVMDGI 215
Query: 148 SNRFISVRGFAYKYPIDTNDTKVG 171
++ G+ P+ NDT G
Sbjct: 216 DPARLAAVGYGEHQPVARNDTDEG 239
>gi|312270773|gb|ADQ55787.1| OmpA [Haemophilus parasuis]
gi|312270775|gb|ADQ55788.1| OmpA [Haemophilus parasuis]
Length = 371
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 248 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 307
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 308 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 363
>gi|167856409|ref|ZP_02479133.1| outer membrane protein P5 precursor [Haemophilus parasuis 29755]
gi|167852469|gb|EDS23759.1| outer membrane protein P5 precursor [Haemophilus parasuis 29755]
gi|209968896|gb|ACJ02809.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968900|gb|ACJ02811.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968904|gb|ACJ02813.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968916|gb|ACJ02819.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968932|gb|ACJ02827.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968960|gb|ACJ02841.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968964|gb|ACJ02843.1| outer membrane protein P5 [Haemophilus parasuis]
gi|222831781|gb|ACJ23250.2| OmpA [Haemophilus parasuis]
gi|224714297|gb|ACN62143.1| outer membrane protein A [Haemophilus parasuis]
gi|224714299|gb|ACN62144.1| outer membrane protein A [Haemophilus parasuis]
gi|224714301|gb|ACN62145.1| outer membrane protein A [Haemophilus parasuis]
gi|224714309|gb|ACN62149.1| outer membrane protein A [Haemophilus parasuis]
gi|224714313|gb|ACN62151.1| outer membrane protein A [Haemophilus parasuis]
gi|224714315|gb|ACN62152.1| outer membrane protein A [Haemophilus parasuis]
gi|224714323|gb|ACN62156.1| outer membrane protein A [Haemophilus parasuis]
gi|224714325|gb|ACN62157.1| outer membrane protein A [Haemophilus parasuis]
gi|224714327|gb|ACN62158.1| outer membrane protein A [Haemophilus parasuis]
gi|224714329|gb|ACN62159.1| outer membrane protein A [Haemophilus parasuis]
gi|224714331|gb|ACN62160.1| outer membrane protein A [Haemophilus parasuis]
gi|224714333|gb|ACN62161.1| outer membrane protein A [Haemophilus parasuis]
gi|299773239|gb|ADJ38694.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773269|gb|ADJ38709.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270735|gb|ADQ55768.1| OmpA [Haemophilus parasuis]
gi|312270737|gb|ADQ55769.1| OmpA [Haemophilus parasuis]
gi|312270739|gb|ADQ55770.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359
>gi|113970538|ref|YP_734331.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113885222|gb|ABI39274.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 264
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 20/170 (11%), Positives = 53/170 (31%), Gaps = 4/170 (2%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
K + + + + Q + + +
Sbjct: 86 SDTDTVKTQQQHIALQRQQLASLSSKQQASEQRAAEYASTQKQLDELLAEQQQLLSELAL 145
Query: 78 --VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
LE FLP L +A ++ + + + ++ + D G L N +S++R
Sbjct: 146 GMNVQFRTGSSELESHFLPQLDNVAKVMKRSSESNLELKGYADRRGDLAYNQALSEQRLL 205
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + + + I+ + F + P++ ++R+ + + P
Sbjct: 206 EV-RGYLIKQGVAPERITTQAFGARMPLNDQQDSESDVFDRRVTLTMQPN 254
>gi|149915595|ref|ZP_01904121.1| OmpA family domain protein [Roseobacter sp. AzwK-3b]
gi|149810487|gb|EDM70330.1| OmpA family domain protein [Roseobacter sp. AzwK-3b]
Length = 340
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 55/157 (35%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ N + + + + D +
Sbjct: 182 GLSDDAGTIPASNTGTNTGTNTGTATSIPTPAQDLALAEALLDWGHVRLADLEFETGRSA 241
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L + L +A L + +A+ HTDS+G L+ N+ +S+ RA + + LI +
Sbjct: 242 LGQGPFASLAALAAFLTEDDGRRVALVGHTDSVGALEPNIDLSRARATAVMTRLIDKYGV 301
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ RG Y PI +N T GR N+R+E +
Sbjct: 302 RPEQLEARGVGYLAPIASNRTDTGRDANRRVEAVLLN 338
>gi|53720132|ref|YP_109118.1| outer membrane protein a precursor [Burkholderia pseudomallei
K96243]
gi|53724795|ref|YP_102249.1| OmpA family protein [Burkholderia mallei ATCC 23344]
gi|76811968|ref|YP_334381.1| outer membrane protein a [Burkholderia pseudomallei 1710b]
gi|126442031|ref|YP_001059910.1| ompA family protein [Burkholderia pseudomallei 668]
gi|126452054|ref|YP_001067198.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|167825270|ref|ZP_02456741.1| ompA family protein [Burkholderia pseudomallei 9]
gi|167919986|ref|ZP_02507077.1| ompA family protein [Burkholderia pseudomallei BCC215]
gi|226197831|ref|ZP_03793405.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|237813303|ref|YP_002897754.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|238561689|ref|ZP_00441673.2| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|242317986|ref|ZP_04817002.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|251766980|ref|ZP_02265557.2| OmpA family protein [Burkholderia mallei PRL-20]
gi|254177032|ref|ZP_04883689.1| OmpA family protein [Burkholderia mallei ATCC 10399]
gi|254258959|ref|ZP_04950013.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|254360032|ref|ZP_04976302.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|262193316|ref|YP_001079767.2| OmpA family protein [Burkholderia mallei NCTC 10247]
gi|52210546|emb|CAH36529.1| outer membrane protein a precursor [Burkholderia pseudomallei
K96243]
gi|52428218|gb|AAU48811.1| OmpA family protein [Burkholderia mallei ATCC 23344]
gi|76581421|gb|ABA50896.1| outer membrane protein a precursor [Burkholderia pseudomallei
1710b]
gi|126221524|gb|ABN85030.1| outer membrane protein A [Burkholderia pseudomallei 668]
gi|126225696|gb|ABN89236.1| OmpA family protein [Burkholderia pseudomallei 1106a]
gi|148029272|gb|EDK87177.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|160698073|gb|EDP88043.1| OmpA family protein [Burkholderia mallei ATCC 10399]
gi|224812455|gb|ACN64870.1| OmpA family protein [Burkholderia pseudomallei]
gi|225930019|gb|EEH26032.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|237505834|gb|ACQ98152.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|238524141|gb|EEP87576.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|242141225|gb|EES27627.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|243064216|gb|EES46402.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|254217648|gb|EET07032.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|261826008|gb|ABN03326.2| OmpA family protein [Burkholderia mallei NCTC 10229]
gi|261835034|gb|ABO04145.2| OmpA family protein [Burkholderia mallei NCTC 10247]
Length = 224
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 9/121 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + V+ +TD IG+ K N +S RA +
Sbjct: 99 DTLFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK--------VGRQNNQRIEIQIFPRGNIK 189
KSYL+ + + G + P+ N K ++R+E+++ ++
Sbjct: 159 KSYLVSK-GVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGTQEVQ 217
Query: 190 K 190
K
Sbjct: 218 K 218
>gi|167911995|ref|ZP_02499086.1| OmpA family protein [Burkholderia pseudomallei 112]
gi|254203932|ref|ZP_04910292.1| OmpA family protein [Burkholderia mallei FMH]
gi|254295613|ref|ZP_04963071.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|147745444|gb|EDK52524.1| OmpA family protein [Burkholderia mallei FMH]
gi|157805511|gb|EDO82681.1| ompA family protein [Burkholderia pseudomallei 406e]
Length = 200
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 9/121 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + V+ +TD IG+ K N +S RA +
Sbjct: 75 DTLFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAV 134
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK--------VGRQNNQRIEIQIFPRGNIK 189
KSYL+ + + G + P+ N K ++R+E+++ ++
Sbjct: 135 KSYLVSK-GVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGTQEVQ 193
Query: 190 K 190
K
Sbjct: 194 K 194
>gi|284007193|emb|CBA72482.1| flagellar motor protein MotB [Arsenophonus nasoniae]
Length = 320
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 11/144 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ Q + I + G I + + ++K +L ++A +LN +P+
Sbjct: 127 DPRLQDLKPNLLIDLMDEGLQIQIIDGENRPMFASGSAVIDKNMQKILHVLAPVLNDYPN 186
Query: 109 TVIAIQSHTDSI-----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
I++ HTDS G +N +S +RA+ + LI G+ ++ + V G A P+
Sbjct: 187 -KISLAGHTDSTAYAKGGYGYSNWELSADRANSSRRTLISGGLDEHKIMRVVGMASTVPL 245
Query: 164 DTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + + +
Sbjct: 246 ENNPAA---AANRRISILVLNKES 266
>gi|123441891|ref|YP_001005874.1| outer membrane protein A [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088852|emb|CAL11658.1| putative outer membrane porin A protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 357
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + L+ + + D IG NL +SQ RA
Sbjct: 230 SDVLFAFNKSTLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQRRA 289
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
D ++ YL+ + I+ RG P+ N ++R+EI++
Sbjct: 290 DSVRDYLVSK-GIPADKITARGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIEV 345
>gi|74055057|gb|AAZ95862.1| PomB [Aeromonas hydrophila]
Length = 303
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 61/159 (38%), Gaps = 7/159 (4%)
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVF 87
+ ++ + + ++ + +T + + F F
Sbjct: 99 APISGVPIKQDGMTLAKIDTQLKESMGTLVDAGVVKLTLDDNWLTVELSSGLLFGSGSAF 158
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQ 143
+ P+L ++ IL + + ++ +TD+ ++N +S RA+ + + LI
Sbjct: 159 MSTNADPVLNTLSDILKPVDNY-VRVRGYTDNQQINNEIFRSNWTLSAARAEAVLTVLIA 217
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + ++ + P ND++ GR N+++ + I
Sbjct: 218 K-GIAPQRLAYEAYGEFSPFAGNDSEQGRLQNRKVVVAI 255
>gi|52425200|ref|YP_088337.1| SmpA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307252|gb|AAU37752.1| SmpA protein [Mannheimia succiniciproducens MBEL55E]
Length = 272
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L ++ ++ +A L + + + TD +G+ NL +SQ RA+ +
Sbjct: 139 DFLFDFDKDSLTERGKKVVDSVAEQLKASKAKTVKVAGFTDRLGSEAYNLELSQRRANQV 198
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-KVGRQN------NQRIEI 180
K +LI R V ++ I G+ I K G+ N+R+EI
Sbjct: 199 KEWLIARDVKAD--IDAIGYGSAQQIKPCTGLKAGKALRDCLRPNRRVEI 246
>gi|332162167|ref|YP_004298744.1| outer membrane protein A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318606220|emb|CBY27718.1| outer membrane protein A precursor [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325666397|gb|ADZ43041.1| outer membrane protein A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 357
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + L+ + + D IG NL +SQ RA
Sbjct: 230 SDVLFAFNKSTLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQRRA 289
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
D ++ YL+ + I+ RG P+ N ++R+EI++
Sbjct: 290 DSVRDYLVSK-GIPADKITARGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIEV 345
>gi|167623616|ref|YP_001673910.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167353638|gb|ABZ76251.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 289
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
V L + + + L + ++ I ++TDS G N +S++
Sbjct: 177 IAFTVLTYESGGTELTRYAKSQIAKVQEYLAYDKNVDLVLIDAYTDSYGGRSANQRVSEQ 236
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD +K + I G + + +N T R N+R+ I+I
Sbjct: 237 RADSVKELFVA-SGIGQNRIHTLGHGERRHVASNQTIDERSRNRRVVIRI 285
>gi|124386037|ref|YP_001026945.1| OmpA family protein [Burkholderia mallei NCTC 10229]
gi|217420891|ref|ZP_03452396.1| outer membrane protein A [Burkholderia pseudomallei 576]
gi|217396303|gb|EEC36320.1| outer membrane protein A [Burkholderia pseudomallei 576]
Length = 179
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 9/121 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + V+ +TD IG+ K N +S RA +
Sbjct: 54 DTLFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAV 113
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK--------VGRQNNQRIEIQIFPRGNIK 189
KSYL+ + + G + P+ N K ++R+E+++ ++
Sbjct: 114 KSYLVSK-GVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGTQEVQ 172
Query: 190 K 190
K
Sbjct: 173 K 173
>gi|330815889|ref|YP_004359594.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3]
gi|327368282|gb|AEA59638.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3]
Length = 218
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 8/120 (6%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + V+ +TD IG+ K N +S RA +
Sbjct: 100 DALFDFDKATLKPLGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAV 159
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIFPRGNIKK 190
KSYL+ + + + G + P+ T + R ++R+E+++ ++K
Sbjct: 160 KSYLVSK-GVESSKVYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTQQVQK 218
>gi|299773255|gb|ADJ38702.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKAIITCLAPDRRVEIQV 359
>gi|238026527|ref|YP_002910758.1| OmpA/MotB domain-containing protein [Burkholderia glumae BGR1]
gi|237875721|gb|ACR28054.1| OmpA/MotB domain protein [Burkholderia glumae BGR1]
Length = 218
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 8/120 (6%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + V+ +TD IG+ K N +S RA +
Sbjct: 100 DALFDFDKATLKPLGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAV 159
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIFPRGNIKK 190
KSYL+ + + + G + P+ T + R ++R+E+++ ++K
Sbjct: 160 KSYLVSK-GVESSKVYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTQQVQK 218
>gi|254443045|ref|ZP_05056521.1| OmpA family protein [Verrucomicrobiae bacterium DG1235]
gi|198257353|gb|EDY81661.1| OmpA family protein [Verrucomicrobiae bacterium DG1235]
Length = 512
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 3/114 (2%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
T + L + + ++ + IL +P I + HT + G + N +S+E
Sbjct: 395 TLKLRPISFQSGTAGLSPEGVSSIEEMVDILQNYPDFRILVAGHTSARGDAEANRQLSEE 454
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ-NNQ--RIEIQIF 183
RA + YL+ + G + P+ + R N+ R+E
Sbjct: 455 RARSVAKYLVDHYAIDEDRVRAVGVGGEQPLRRLAGESYRAHQNRLSRVEFSFL 508
>gi|86146029|ref|ZP_01064356.1| Outer membrane protein [Vibrio sp. MED222]
gi|85836234|gb|EAQ54365.1| Outer membrane protein [Vibrio sp. MED222]
Length = 278
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 12/155 (7%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + + + + + + + K++
Sbjct: 120 LNELEVQLDYVTSQARCEPPKNENQFRMQLSVIEQLYDLLNVDNQFAENSTEVNPKYMGR 179
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L T+LNK S + + H D+ GT K N ++ RA ++ + + I
Sbjct: 180 LAEATTLLNKHKSLDLVVTGHADATGTEKFNDDLALGRAKQVER-YLTIFGLGAQRIKAV 238
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
P+ ++ R N+R+ I+I N +K
Sbjct: 239 SVGETVPLFEGESDGTRLTNRRVSIEIISPKNAEK 273
>gi|238754341|ref|ZP_04615697.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473]
gi|238707374|gb|EEP99735.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473]
Length = 355
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + D IG NL +S+ RA
Sbjct: 228 SDVLFAFNKATLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRIGQAAPNLKLSENRA 287
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YL+ + IS RG P+ N ++R+EI++
Sbjct: 288 RSVVEYLVAK-GIPADKISARGMGQADPVTGNTCDNVKPRAALIECLAPDRRVEIEV 343
>gi|91218699|ref|ZP_01255595.1| probable outer membrane protein [Psychroflexus torquis ATCC 700755]
gi|91183150|gb|EAS69597.1| probable outer membrane protein [Psychroflexus torquis ATCC 700755]
Length = 197
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + + LQ I + +P+ I ++SHTDS + N ++S +RA +
Sbjct: 96 YFDLDKFQIRPDAEVELQKIIVAMKSYPNLRIDVRSHTDSRAGDEYNQILSNKRAKATIN 155
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQ 176
Y+I++ S+ IS RG+ ++ ++ N+
Sbjct: 156 YIIEKSRISSERISGRGYGESQLVNKCSNGIDCSESEHALNR 197
>gi|59713902|ref|YP_206677.1| hypothetical protein VF_A0719 [Vibrio fischeri ES114]
gi|59482150|gb|AAW87789.1| hypothetical protein VF_A0719 [Vibrio fischeri ES114]
Length = 1613
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 16/162 (9%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLP 94
+ L A ++ + G +I + L
Sbjct: 606 AEADWAKQLSDATKVLNNDGKEQIARIITQGSRAIIHINFKFNSSELPNTGTTLRSDIDK 665
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN---RF 151
+ + IA +L P I I H IG+ K N I+++RA ++ ++ + N
Sbjct: 666 VCEKIAELLKTHPDYRIQIDGHAGRIGSDKANKTIAEDRAKQVEQAILDKAKEDNTLPER 725
Query: 152 ISVRGFAYKYPIDTND---------TKVGRQNNQRIEIQIFP 184
I PI + ++R+EI + P
Sbjct: 726 IITLSHGNTQPISAGNAKVDMSETGDDSALAEDRRVEISLLP 767
>gi|84501388|ref|ZP_00999593.1| OmpA/MotB domain protein [Oceanicola batsensis HTCC2597]
gi|84390679|gb|EAQ03167.1| OmpA/MotB domain protein [Oceanicola batsensis HTCC2597]
Length = 192
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 49/164 (29%), Gaps = 6/164 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS-RIGDMITCYIP 77
S E+ + K +V A V D + I
Sbjct: 31 SEMSAEELETLFQKQKTRGLVLAPTNQEDAAANTADTAPEAQDSTYVEFAPEDQVNIQIS 90
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L P L + ++ I HTD+ G+ N +S RA+ +
Sbjct: 91 ---FDFDSAALRDDQKPKLATLCQVMKSADIGTFRIIGHTDASGSASYNERLSLLRAEEV 147
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
K YL + + G ++P+ G N+R+E Q
Sbjct: 148 KRYLSGDCGIEEQRLEAVGVGEQFPL-DKADPRGDA-NRRVEFQ 189
>gi|197337791|ref|YP_002158113.1| OmpA family protein [Vibrio fischeri MJ11]
gi|197315043|gb|ACH64492.1| OmpA family protein [Vibrio fischeri MJ11]
Length = 306
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 65/176 (36%), Gaps = 23/176 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK+ + ++ GC ++DK ++ Q L
Sbjct: 3 IKQSLFIGLGLLSLFGCST------------------DTYVSQENIDKYDERVQKFLIAE 44
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+V R I + H F + + + P L + K IAI HTD G
Sbjct: 45 CLVPQRE---IQIGVAEHFEF-DKSEIMEGDFPSLNQFVRDIEKLKG-RIAIVGHTDYQG 99
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ K N +S RAD IK+YL+++ + N ++ + K P+ T N+R
Sbjct: 100 SEKYNEQLSLRRADSIKTYLLKQLNADNYEWEIKYYGEKKPLIEGRTLEANAANRR 155
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 3/121 (2%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + H F + L++K L +A L I I HTD G++ N +
Sbjct: 179 RKVYVTMASHFDF-DKSVLKEKDKIELDKLALKLEGLTG-RILIAGHTDYQGSVSYNEKL 236
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
++ER+ ++ YL R + V+ F PI T N+R +F G +
Sbjct: 237 AKERSIAVQEYLKTRVDPTQFVWEVKSFGESEPIIQEHTLKANAENRRA-FVVFKEGPLP 295
Query: 190 K 190
+
Sbjct: 296 E 296
>gi|71280429|ref|YP_268267.1| putative chemotaxis MotB protein [Colwellia psychrerythraea 34H]
gi|71146169|gb|AAZ26642.1| putative chemotaxis MotB protein [Colwellia psychrerythraea 34H]
Length = 329
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 60/159 (37%), Gaps = 11/159 (6%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS---EVFLEKK 91
V S + ++ + GD + + + F S L +
Sbjct: 111 SDAKVGSNLSSLEKELHTALYELVESGFAQLQIDGDWLEIELNSGLLFPSGSSSATLSAE 170
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVS 147
+L +I ++ + + I ++ +TD+ +N +S RA I ++++
Sbjct: 171 A--ILTVIYDVIGQASNF-IRVRGYTDNQVINNEIYSSNWELSVFRATAILR-VLEKLGL 226
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ +++ G+ YP N T GR N+++ + I G
Sbjct: 227 NPARMAIEGYGQYYPSADNLTSEGRAKNRKVVVAISKYG 265
>gi|224417757|ref|ZP_03655763.1| motility protein MotB [Helicobacter canadensis MIT 98-5491]
gi|253827100|ref|ZP_04869985.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491]
gi|313141298|ref|ZP_07803491.1| motb protein [Helicobacter canadensis MIT 98-5491]
gi|253510506|gb|EES89165.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491]
gi|313130329|gb|EFR47946.1| motb protein [Helicobacter canadensis MIT 98-5491]
Length = 256
Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 9/168 (5%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEV 86
++ +SL +E + + + IP + F
Sbjct: 77 ATPIEAQQEMEDATNIFASLITEYNEINKLANGPAVEFEEAEEGVIIRIPESLLFESGSA 136
Query: 87 FLE-KKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLI-----SQERADVIKS 139
L L L+ + +K P T +I HTD++ +N + S R +
Sbjct: 137 TLTNSSGLAFLKRLTLEFDKLPETALIKAIGHTDNVPMRENPIFADNLELSIARGVNVAE 196
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+I G+S R + G PI +N R N+R+++ I+ G
Sbjct: 197 LIITEGISKERVLG-GGEGEFSPIASNKIPELRAKNRRVDLYIYSIGE 243
>gi|114776804|ref|ZP_01451847.1| hypothetical protein SPV1_11331 [Mariprofundus ferrooxydans PV-1]
gi|114552890|gb|EAU55321.1| hypothetical protein SPV1_11331 [Mariprofundus ferrooxydans PV-1]
Length = 219
Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 65/193 (33%), Gaps = 25/193 (12%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + S+ I + + L D + +L+ ++R+ + +P
Sbjct: 25 SAPQTVQNQQAAPVSHTPSIDDGKTNDELRAQNDAMKQELKAAEDELARLQKISHKALPA 84
Query: 79 HV-----------SFVSEVFLEKKFLPMLQLIATILNKFPS-TVIAIQSHTDSIG----- 121
+ + +E K +L IA P + I+ ++D
Sbjct: 85 MLEPHDRLWARISFKSGQTSVEPKTRKVLTAIAGKFLAHPGKMHLEIRGYSDDEPIGGYK 144
Query: 122 -------TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
LK+ ++Q RAD + + +I + G I N+T GR
Sbjct: 145 HSHKPRHNLKSLQALTQARADAVAAVMIDA-GIPQTLVHATGMGATGFISDNNTAEGRSK 203
Query: 175 NQRIEIQIFPRGN 187
N+R++I + +
Sbjct: 204 NRRVDIHLVTDDD 216
>gi|15597744|ref|NP_251238.1| hypothetical protein PA2548 [Pseudomonas aeruginosa PAO1]
gi|9948606|gb|AAG05936.1|AE004682_8 hypothetical protein PA2548 [Pseudomonas aeruginosa PAO1]
Length = 464
Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 5/149 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ R G K + ++ + L+ K L
Sbjct: 318 GQAIVTRSGFVAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFRFQEGSALLDNKALLD 377
Query: 96 LQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+Q + L + + D + ++L+S+ RA ++ L + GVS
Sbjct: 378 VQRLLDYLRQNRKLQERTVLVGFGDPKSDAERSVLLSRLRAMAVRRELARGGVSFR---E 434
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ GF + P+ +ND ++GRQ N+R+E+ +
Sbjct: 435 IAGFGDELPVASNDQELGRQKNRRVEVWV 463
>gi|330873802|gb|EGH07951.1| flagellar motor protein MotB [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 341
Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 15/183 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ + +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPIEAETSETKAEAVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NL 127
I + L+ F +L +A + P+ I+I HTD+ + N N
Sbjct: 158 IMDADNRPMFDSGSARLKPYFEDILLALADTIKSVPN-KISISGHTDATPFVGNNGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S RA+ + L+ + V G A + D G N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPEEQVARVVGHASSV-LYDRDNPTG-PINRRIDIVVLTKKA 274
Query: 188 IKK 190
++
Sbjct: 275 QQR 277
>gi|225024677|ref|ZP_03713869.1| hypothetical protein EIKCOROL_01559 [Eikenella corrodens ATCC
23834]
gi|224942566|gb|EEG23775.1| hypothetical protein EIKCOROL_01559 [Eikenella corrodens ATCC
23834]
Length = 230
Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 28/202 (13%)
Query: 1 MIKELGL-SMFIMTTISGCGLAS---REKKKVFLHKSNDTDIVNKRFG------------ 44
M K+L L ++F+ SG +A +K + ++V +
Sbjct: 1 MTKQLKLGALFLALVASGAAMADSSFNNEKYGYTISQQSREVVRSNYEPKGAHECWENSF 60
Query: 45 --SSLDKAE-DEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIA 100
+ +D+ E + + + + F + L + L +A
Sbjct: 61 LNAEVDRLGLVECGDRQAEAPAPAEPQVREELVSLSSNFLFGFDKFNLRPEARTTLDELA 120
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L+ + ++ +TD +G+ N +S+ RA+ + YL+ R IS G
Sbjct: 121 QRLSGSNVQSVRVEGNTDFMGSDAYNQRLSERRANTVSEYLVGR-GVPAEKISAVGLGES 179
Query: 161 YPIDTNDTKVGRQ--NN--QRI 178
T+ +Q N +R+
Sbjct: 180 Q---AKMTEQCQQEVRNLGRRV 198
>gi|319763880|ref|YP_004127817.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
gi|330823856|ref|YP_004387159.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
K601]
gi|317118441|gb|ADV00930.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
gi|329309228|gb|AEB83643.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
Length = 171
Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Query: 67 RIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ GD + + F + + ML + L + ++ H D G+
Sbjct: 53 QTGDGWELQMSGKLLFDFNSDAMTGERREMLVRMGHALVGVGVRALRVEGHADDQGSPDY 112
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S RA + L + G+ R I +RG+ P+ ++ RQ N+R+ + +
Sbjct: 113 NERLSLRRAQAVAQVLAEAGIPRER-IDIRGYGASRPLVIGTSEAARQENRRVALIV 168
>gi|107101995|ref|ZP_01365913.1| hypothetical protein PaerPA_01003042 [Pseudomonas aeruginosa PACS2]
Length = 461
Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 5/149 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ R G K + ++ + L+ K L
Sbjct: 315 GQAIVTRSGFVAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFRFQEGSALLDNKALLD 374
Query: 96 LQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+Q + L + + D + ++L+S+ RA ++ L + GVS
Sbjct: 375 VQRLLDYLRQNRKLQERTVLVGFGDPKSDAERSVLLSRLRAMAVRRELARGGVSFR---E 431
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ GF + P+ +ND ++GRQ N+R+E+ +
Sbjct: 432 IAGFGDELPVASNDQELGRQKNRRVEVWV 460
>gi|260778741|ref|ZP_05887633.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260604905|gb|EEX31200.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 279
Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 44/113 (38%), Gaps = 1/113 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + K++ L A IL + S + + H DS+G N ++ RA +
Sbjct: 157 DNQFAFNSTEVNPKYMGHLAQAANILREHKSLNLTVTGHADSVGDELQNQQLAMGRAKQV 216
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
K + + I + P+ ++ R N+R+ I++ + +
Sbjct: 217 KR-YLTIFGLEPKRIEAKSLGESLPLFEGESDGVRLTNRRVSIEVVETNELAE 268
>gi|313107451|ref|ZP_07793639.1| putative ABC-type periplasmic phosphate-binding protein
[Pseudomonas aeruginosa 39016]
gi|310880141|gb|EFQ38735.1| putative ABC-type periplasmic phosphate-binding protein
[Pseudomonas aeruginosa 39016]
Length = 461
Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 5/149 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ R G K + ++ + L+ K L
Sbjct: 315 GQAIVTRSGFVAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFRFQEGSALLDNKALLD 374
Query: 96 LQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+Q + L + + D + ++L+S+ RA ++ L + GVS
Sbjct: 375 VQRLLDYLRQNRKLQERTVLVGFGDPKSDAERSVLLSRLRAMAVRRELARGGVSFR---E 431
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ GF + P+ +ND ++GRQ N+R+E+ +
Sbjct: 432 IAGFGDELPVASNDQELGRQKNRRVEVWV 460
>gi|218675048|ref|ZP_03524717.1| OmpA family membrane protein [Rhizobium etli GR56]
Length = 500
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 54/133 (40%), Gaps = 7/133 (5%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIA 112
L + + + + L+ +A +L K PS
Sbjct: 361 SLDEVKYSARIRDKVRRIDLDTITFATGSAEIPMTQARTLRKVADAINQVLEKDPSETFL 420
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD++G+ ++NL++S +RA+ + + L + ++ +G+ +Y
Sbjct: 421 IEGHTDAVGSDQSNLILSDQRAESVANVLTDVYGIAPENLATQGYGERYLKVNTSDPE-- 478
Query: 173 QNNQRIEI-QIFP 184
Q N+R+ I ++ P
Sbjct: 479 QENRRVTIRRVTP 491
>gi|170693710|ref|ZP_02884868.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170141492|gb|EDT09662.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 215
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + V+ +TD IG+ K N +S RA +
Sbjct: 99 DALFDFDKAVLKPAGKEKLDDLASKIQGLNLEVVVATGYTDRIGSDKYNDRLSLRRAQAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIF 183
K+YL+ + + I G + P+ T + R ++R+E+++
Sbjct: 159 KAYLVSK-GIESNRIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVV 210
>gi|260778838|ref|ZP_05887730.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260605002|gb|EEX31297.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 205
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 63/189 (33%), Gaps = 9/189 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L S + ++ D + ++ D + + DT
Sbjct: 1 MKRTILCSLPFLGASLAFPVLAYDDQYEYIQTPDAEQISDLTDDDRDGVVNA-RDLCPDT 59
Query: 62 --GIVVSRIGDMITCYIPVH-----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
G + G + + + F + +A ++++ S I IQ
Sbjct: 60 PIGAQIDNDGCSLEVTKEEERQLRILFANDSYDVSPVFSDQISAMADFMDRYRSASIEIQ 119
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ G N+ +S++RA ++ L+ + +++ GF + T + +
Sbjct: 120 GYASKTGNSDYNVELSKKRAVAVEELLLS-YGINPERVTIVGFGATHLESTGEEETDHAL 178
Query: 175 NQRIEIQIF 183
N+R+ +
Sbjct: 179 NRRVTATVV 187
>gi|327189348|gb|EGE56516.1| putative outer membrane protein, OmpA family [Rhizobium etli
CNPAF512]
Length = 722
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 7/133 (5%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIA 112
L + + + + L+ +A +L K PS
Sbjct: 583 SLDEVKYSARIRDKVRRIDLDTITFATGSAEIPMAQARTLRKVADAISQVLKKDPSETFL 642
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD++G+ ++NL++S +RA+ + + L ++ +G+ +Y
Sbjct: 643 IEGHTDAVGSDQSNLVLSDQRAESVANVLSDVYGIPPENMATQGYGERYLKVNTAGPE-- 700
Query: 173 QNNQRIEI-QIFP 184
Q N+R+ I ++ P
Sbjct: 701 QENRRVTIRRVTP 713
>gi|218677868|ref|ZP_03525765.1| putative outer membrane protein, OmpA family [Rhizobium etli CIAT
894]
Length = 145
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 6/129 (4%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIA 112
L + + + + L+ +A +L K PS
Sbjct: 6 SLDEVKYSARIRDKVRRIDLDTVTFATGSAEIPMTQARTLRKVADAISQVLKKDPSETFL 65
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD++GT ++NL++S +RA+ + + L ++ +G+ +Y
Sbjct: 66 IEGHTDAVGTDQSNLVLSDQRAESVANVLSDVYGIPPENLATQGYGERYLKVNTSGPE-- 123
Query: 173 QNNQRIEIQ 181
Q N+R+ I+
Sbjct: 124 QENRRVTIR 132
>gi|83720431|ref|YP_442168.1| OmpA family protein [Burkholderia thailandensis E264]
gi|83654256|gb|ABC38319.1| OmpA family protein [Burkholderia thailandensis E264]
Length = 224
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 9/121 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + V+ +TD IG+ K N +S RA +
Sbjct: 99 DTLFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK--------VGRQNNQRIEIQIFPRGNIK 189
KSYL+ + + G + PI N K ++R+E+++ ++
Sbjct: 159 KSYLVSK-GVPANKVYTEGKGKRNPITGNTCKQKNRKQLIACLAPDRRVEVEVVGTQEVQ 217
Query: 190 K 190
K
Sbjct: 218 K 218
>gi|148862|gb|AAA24941.1| 31 kDa antigen [Histophilus somni]
Length = 273
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L K + +A L F + I I TD +GT NL +SQ RAD +
Sbjct: 139 DLLFDFDQDTLTSKGEEAVDNVAMQLEAFSAKEIKIVGFTDRLGTDSYNLDLSQRRADRV 198
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPI-DTNDTKV-----GRQNNQRIEIQIFPRGNIKK 190
K LI++G++ + I G+ I ND + N+R+EI GNI K
Sbjct: 199 KERLIEKGLNID--IIAIGYGKTQQIKACNDVPAKELKDCLRPNRRVEIS--AYGNISK 253
>gi|113460985|ref|YP_719052.1| outer membrane protein [Haemophilus somnus 129PT]
gi|170717551|ref|YP_001784639.1| SmpA/OmlA domain-containing protein [Haemophilus somnus 2336]
gi|112823028|gb|ABI25117.1| outer membrane protein [Haemophilus somnus 129PT]
gi|168825680|gb|ACA31051.1| SmpA/OmlA domain protein [Haemophilus somnus 2336]
Length = 273
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L K + +A L F + I I TD +GT NL +SQ RAD +
Sbjct: 139 DLLFDFDQDTLTSKGEEAVDNVAMQLEAFSAKEIKIVGFTDRLGTDSYNLDLSQRRADRV 198
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPI-DTNDTKV-----GRQNNQRIEIQIFPRGNIKK 190
K LI++G++ + I G+ I ND + N+R+EI GNI K
Sbjct: 199 KERLIEKGLNID--IIAIGYGKTQQIKACNDVPAKELKDCLRPNRRVEIS--AYGNISK 253
>gi|304395571|ref|ZP_07377454.1| OmpA/MotB domain protein [Pantoea sp. aB]
gi|304356865|gb|EFM21229.1| OmpA/MotB domain protein [Pantoea sp. aB]
Length = 235
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 70/204 (34%), Gaps = 24/204 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ +F+ +I+ EK+K+ + + + E EF L +
Sbjct: 29 LMMVFMFISIAYMHYVRIEKEKIKEVAVAYEQAQQQLYNA----LEIEFSKDLPSWDAEI 84
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPS--TVIAIQSHTDS 119
+ + P + + L+ KF +L +L+++ T + I+ HT +
Sbjct: 85 DKQTLEVRFKSPDVLFGLGSSELKPKFKEILNDFFPRYLRVLDQYKQHITEVRIEGHTST 144
Query: 120 IGT--------LKNNLLISQERADVIKSYLI------QRGVSSNRFISVRGFAYKYPIDT 165
T NN+ +SQ R + Y+ + G++ +PI
Sbjct: 145 DWTGAANQDVAYFNNMELSQGRTRAVLQYVYSLKESETHQKWVKSKFAAVGYSSSHPILD 204
Query: 166 NDTKVGRQNNQRIEIQIFPRGNIK 189
K ++R+ ++ ++
Sbjct: 205 AAEKEDPNRSRRVTFKVITNAELQ 228
>gi|167581046|ref|ZP_02373920.1| OmpA family protein [Burkholderia thailandensis TXDOH]
Length = 200
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 9/121 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + V+ +TD IG+ K N +S RA +
Sbjct: 75 DTLFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAV 134
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK--------VGRQNNQRIEIQIFPRGNIK 189
KSYL+ + + G + PI N K ++R+E+++ ++
Sbjct: 135 KSYLVSK-GVPANKVYTEGKGKRNPITGNTCKQKNRKQLIACLAPDRRVEVEVVGTQEVQ 193
Query: 190 K 190
K
Sbjct: 194 K 194
>gi|116050492|ref|YP_790689.1| hypothetical protein PA14_31620 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218891473|ref|YP_002440340.1| putative ABC-type periplasmic phosphate-binding protein
[Pseudomonas aeruginosa LESB58]
gi|254235540|ref|ZP_04928863.1| hypothetical protein PACG_01464 [Pseudomonas aeruginosa C3719]
gi|115585713|gb|ABJ11728.1| putative ABC-type periplasmic phosphate-binding protein
[Pseudomonas aeruginosa UCBPP-PA14]
gi|126167471|gb|EAZ52982.1| hypothetical protein PACG_01464 [Pseudomonas aeruginosa C3719]
gi|218771699|emb|CAW27473.1| putative ABC-type periplasmic phosphate-binding protein
[Pseudomonas aeruginosa LESB58]
Length = 464
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 5/149 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ R G K + ++ + L+ K L
Sbjct: 318 GQAIVTRSGFVAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFRFQEGSALLDNKALLD 377
Query: 96 LQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+Q + L + + D + ++L+S+ RA ++ L + GVS
Sbjct: 378 VQRLLDYLRQNRKLQERTVLVGFGDPKSDAERSVLLSRLRAMAVRRELARGGVSFR---E 434
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ GF + P+ +ND ++GRQ N+R+E+ +
Sbjct: 435 IAGFGDELPVASNDQELGRQKNRRVEVWV 463
>gi|311696932|gb|ADP99805.1| OmpA/MotB domain protein [marine bacterium HP15]
Length = 341
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 54/153 (35%), Gaps = 14/153 (9%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP-------ML 96
+ + L V +GD + + L ++ +L
Sbjct: 192 EQYQSEFFARLRDILAGNE-NVRIVGDRFLLP-SELLFASASAELGEEGRQELDKLAKLL 249
Query: 97 QLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
++ + + ++ I HTD + +N +S RA + YL + R +
Sbjct: 250 LDVSAKIPEDVDWILRIDGHTDVIPINTPRFPSNWELSTARAVAVVRYLAAQ-GVPERRM 308
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ GF +P+ + Q N+RIE+++ R
Sbjct: 309 AAAGFGEFFPVAEGTSPEALQRNRRIELKLTDR 341
>gi|254240978|ref|ZP_04934300.1| hypothetical protein PA2G_01659 [Pseudomonas aeruginosa 2192]
gi|126194356|gb|EAZ58419.1| hypothetical protein PA2G_01659 [Pseudomonas aeruginosa 2192]
Length = 464
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 5/149 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ R G K + ++ + L+ K L
Sbjct: 318 GQAIVTRSGFVAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFRFQEGSALLDNKALLD 377
Query: 96 LQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+Q + L + + D + ++L+S+ RA ++ L + GVS
Sbjct: 378 VQRLLDYLRQNRKLQERTVLVGFGDPKSDAERSVLLSRLRAMAVRRELARGGVSFR---E 434
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ GF + P+ +ND ++GRQ N+R+E+ +
Sbjct: 435 IAGFGDELPVASNDQELGRQKNRRVEVWV 463
>gi|330860773|emb|CBX71062.1| outer membrane protein A [Yersinia enterocolitica W22703]
Length = 363
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + L+ + + D IG NL +SQ RA
Sbjct: 236 SDVLFAFNKSTLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQRRA 295
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
D ++ YL+ + I+ RG P+ N ++R+EI++
Sbjct: 296 DSVRDYLVSK-GIPADKITARGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIEV 351
>gi|300113444|ref|YP_003760019.1| hypothetical protein Nwat_0743 [Nitrosococcus watsonii C-113]
gi|299539381|gb|ADJ27698.1| conserved hypothetical protein [Nitrosococcus watsonii C-113]
Length = 237
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/204 (13%), Positives = 64/204 (31%), Gaps = 24/204 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ +F+ I+ A E+ ++ + + S + + E + + V
Sbjct: 29 LMIVFMFIAIALMRDAFMERDRIKEIAVAYQENQVAIYESLMKEFEKDLKR----WDARV 84
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI----LNKFPST--VIAIQSHTDS 119
P + + ++F +L L + + I I+ HT S
Sbjct: 85 DPDTLAFEFLSPEVLFATGSTEIRQRFKEILSDFFPRYLVILKHYKDSIDEIRIEGHTSS 144
Query: 120 IGT--------LKNNLLISQERADVIKSYLIQRGVSS------NRFISVRGFAYKYPIDT 165
I N+L+SQ R + Y+ + R + GF+ +
Sbjct: 145 IWNNRVSETKAYFLNMLLSQGRTRSVLHYVYELPAVERDRDWVKRHFAAVGFSSSRLVLD 204
Query: 166 NDTKVGRQNNQRIEIQIFPRGNIK 189
R ++R+ ++ ++
Sbjct: 205 AQGNEDRARSRRVSFRVITNAEMQ 228
>gi|219872299|ref|YP_002476674.1| outer membrane protein P5 , heat-modifiable outer membrane protein
[Haemophilus parasuis SH0165]
gi|219692503|gb|ACL33726.1| outer membrane protein P5 precursor, heat-modifiable outer membrane
protein [Haemophilus parasuis SH0165]
gi|253807583|gb|ACT36164.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270777|gb|ADQ55789.1| OmpA [Haemophilus parasuis]
gi|312270779|gb|ADQ55790.1| OmpA [Haemophilus parasuis]
Length = 371
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 248 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 307
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV---------GRQNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N ++R+EIQ+
Sbjct: 308 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 363
>gi|90415116|ref|ZP_01223071.1| hypothetical OmpA family protein [Photobacterium profundum 3TCK]
gi|90323761|gb|EAS40380.1| hypothetical OmpA family protein [Photobacterium profundum 3TCK]
Length = 252
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 48/131 (36%), Gaps = 1/131 (0%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ + ++ + + +E F L IA ++ + P
Sbjct: 110 QAQIEIARLQQDLQLQSEERQALMLEVNVHFRTGSSDIEPLFQQQLDEIAELMKQSPEMS 169
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ + D G + N +S R D ++ YL +G+ +++ + V + P+ +
Sbjct: 170 WQLAGYADRRGDSQKNFDLSMRRVDAVRDYLESQGIDTDQLL-VDAYGDLEPLKSEQNFE 228
Query: 171 GRQNNQRIEIQ 181
++R+ ++
Sbjct: 229 NDFFDRRVTLR 239
>gi|50120684|ref|YP_049851.1| outer membrane protein A [Pectobacterium atrosepticum SCRI1043]
gi|49611210|emb|CAG74656.1| outer-membrane protein A [Pectobacterium atrosepticum SCRI1043]
Length = 366
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + TD +G+ + N +S++RA
Sbjct: 239 SDVLFNFNKATLKPEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRLGSEQYNQALSEKRA 298
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + +S RG P+ T D R ++R+EI++
Sbjct: 299 QSVVDYLVSK-GIPANKVSARGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIEV 354
>gi|90413203|ref|ZP_01221198.1| hypothetical protein P3TCK_16554 [Photobacterium profundum 3TCK]
gi|90325755|gb|EAS42213.1| hypothetical protein P3TCK_16554 [Photobacterium profundum 3TCK]
Length = 168
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 55/179 (30%), Gaps = 22/179 (12%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K ++T ++GC + + +DK +D +
Sbjct: 1 MKVFLRTVCITLLLTLLAGCATDTYVSDEN------------------IDKFDDLSVKKF 42
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I + + V + L+ + + L + I I HTD
Sbjct: 43 LIAEIQPTVEPEKKIYLSLVSHFDFDKSILKPEDIAELDDFIAKVINLKG-HIVIAGHTD 101
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ N +S R+ VI+ YL R N V F PI + N+R
Sbjct: 102 YQGSDDYNEKLSFRRSTVIQQYLSARISVENYTFEVAYFGENNPIVKAHSLKANALNRR 160
>gi|167570798|ref|ZP_02363672.1| ompA family protein [Burkholderia oklahomensis C6786]
Length = 224
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 9/121 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + V+ +TD IG+ K N +S RA +
Sbjct: 99 DTLFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK--------VGRQNNQRIEIQIFPRGNIK 189
KSYL+ + + G + P+ N K ++R+E+++ ++
Sbjct: 159 KSYLVSK-GVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGTQEVQ 217
Query: 190 K 190
K
Sbjct: 218 K 218
>gi|257482421|ref|ZP_05636462.1| flagellar motor protein MotB [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331009754|gb|EGH89810.1| flagellar motor protein MotB [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 341
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 15/183 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ ++ +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPLEAETSETKAEEVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NL 127
I + L+ F +L +A + P+ I+I HTD+ + N N
Sbjct: 158 IMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN-KISISGHTDATPFVGNGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S RA+ + L+ ++ V G+A + ++ N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDHENPTN-PVNRRIDIVVLTKKA 274
Query: 188 IKK 190
++
Sbjct: 275 QQR 277
>gi|170721680|ref|YP_001749368.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169759683|gb|ACA72999.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 831
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 11/123 (8%)
Query: 70 DMITCYIPVHVSFV--SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNN 126
+ IT +F L+ + L IA+ L P+ I I H D +G + N
Sbjct: 706 ETITLESDTLFAFARADFQSLKSEGQNQLSAIASKLLNTPNIGKIIISGHADQLGDAQGN 765
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIE 179
L +S++RA I + +S +G + P+ D + R N+R+E
Sbjct: 766 LQVSRQRAQTI-RTYLVGKGVPAELVSAQGEGSRKPLVNCDMQQPRAQLIKCLEPNRRVE 824
Query: 180 IQI 182
I++
Sbjct: 825 IEV 827
>gi|85704497|ref|ZP_01035599.1| OmpA/MotB domain protein [Roseovarius sp. 217]
gi|85670905|gb|EAQ25764.1| OmpA/MotB domain protein [Roseovarius sp. 217]
Length = 192
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 56/191 (29%), Gaps = 12/191 (6%)
Query: 1 MIKELGLSMFIMTT----ISGCGLASREKKKVFLHKSNDTD-IVNKRFGSSLDKAEDEFQ 55
M ++ L + + +SG A + + K G L +
Sbjct: 1 MYRQTILVLSLALAGVPALSGIAYAQANDASNLSAEQLEEFFNKQKTRGLVLAPTNAQDN 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ DT S + V L P L + ++
Sbjct: 61 TGVGDTAATPSATQTYVELAPEEQVSIQISFDFDSSALRADQKPKLVTLCKVMQTADIGS 120
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I HTDS G+ N +S RA +K +L + G + +D D
Sbjct: 121 FRIVGHTDSSGSASYNERLSLLRAQEVKRHLETDCGIEPERLEAVGVGEAFLLDKADPDS 180
Query: 171 GRQNNQRIEIQ 181
N+R+E Q
Sbjct: 181 D--ANRRVEFQ 189
>gi|302189799|ref|ZP_07266472.1| flagellar motor protein MotB [Pseudomonas syringae pv. syringae
642]
Length = 349
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 61/178 (34%), Gaps = 15/178 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ + +R L + +++ Q Q I+ D +
Sbjct: 98 SPDTVPIETETAETKAEAVEQERLEMLLQELQNKVQENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNL 127
I + L+ F +L +A + P+ ++I HTD+ N
Sbjct: 158 IMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN-KVSISGHTDATPFVGSGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S RA+ + L+ ++ V G+A + + N+RI+I + R
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDHQNPTN-PINRRIDIVVLTR 272
>gi|283133065|dbj|BAI63831.1| flagellar motor protein MotB [Pseudomonas syringae pv. tabaci]
Length = 341
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 15/183 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ ++ +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPLEAETSETKAEEVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NL 127
I + L+ F +L +A + P+ I+I HTD+ + N N
Sbjct: 158 IMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN-KISISGHTDATPFVGNGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S RA+ + L+ ++ V G+A + ++ N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDHENPTN-PVNRRIDIVVLTKKA 274
Query: 188 IKK 190
++
Sbjct: 275 QQR 277
>gi|163800131|ref|ZP_02194032.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp.
AND4]
gi|159175574|gb|EDP60368.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp.
AND4]
Length = 356
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 74/180 (41%), Gaps = 16/180 (8%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
I +SG SR + I + +S ++ ++ V
Sbjct: 161 ITLLLSG-SEGSRGSNDSAISSITLPTIQMQNALASFNQCREQLPELSYSQARNV----- 214
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLI 129
+ L L + + ++ T I + HTD++G+ NL +
Sbjct: 215 -------NLPFQFGQKKLNASQQITLAALYSYISVDERVTKILVDGHTDNVGSQLTNLTV 267
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
S++RA+ + LIQ+G+ + I VR +YPI +N T++G+ N+R+ +++ R N +
Sbjct: 268 SRQRAEQVAQALIQKGMDRS-LIEVRAHGSRYPIASNKTQLGQAKNRRVTLRLV-RDNER 325
>gi|330886588|gb|EGH20249.1| flagellar motor protein MotB [Pseudomonas syringae pv. mori str.
301020]
Length = 341
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 15/183 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ ++ +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPLEAETSETKAEEVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NL 127
I + L+ F +L +A + P+ I+I HTD+ + N N
Sbjct: 158 IMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN-KISISGHTDATPFVGNGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S RA+ + L+ ++ V G+A + ++ N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDHENPTN-PVNRRIDIVVLTKKA 274
Query: 188 IKK 190
++
Sbjct: 275 QQR 277
>gi|188995160|ref|YP_001929412.1| putative OmpA family protein [Porphyromonas gingivalis ATCC 33277]
gi|188594840|dbj|BAG33815.1| putative OmpA family protein [Porphyromonas gingivalis ATCC 33277]
Length = 672
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 44/139 (31%), Gaps = 30/139 (21%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + L + + L + IL P I + SH D G NL +S RA
Sbjct: 534 LQNILYDFDKATLRPESMKSLDELIRILTDNPDIRIELGSHADRKGPDAYNLGLSDRRAK 593
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYP------------------------IDTNDTKV- 170
+ YL R + ++ +G+ P + T+
Sbjct: 594 SVVDYLTSR-GIAADRLTWKGYGKSVPKTVTAKIAERHDFLKEGDVLTEEFVAP-LTEEQ 651
Query: 171 ---GRQNNQRIEIQIFPRG 186
Q N+R E ++
Sbjct: 652 QSVCDQLNRRTEFRVIEEE 670
>gi|54302438|ref|YP_132431.1| OmpA family protein [Photobacterium profundum SS9]
gi|46915860|emb|CAG22631.1| hypothetical OmpA family protein [Photobacterium profundum SS9]
Length = 252
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/177 (12%), Positives = 61/177 (34%), Gaps = 2/177 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-SLDKAEDEFQMQLQDTGIV 64
+ ++ I G + E+ K + N ++ + + ++ +
Sbjct: 64 AIIGAMVGGIVGTAVGQDEQIKSQNEDMVELTARNTELERIDINYNQAQIEIARLQQDLQ 123
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ +E F L IA ++ + P + + D G +
Sbjct: 124 LQSEERQALMLEVNVHFRTGSSDIEPLFQQQLDEIAELMKQSPEMSWQLAGYADRRGDSQ 183
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N +S R D ++ YL +G+ +++ + V + P+ + ++R+ ++
Sbjct: 184 KNFDLSMRRVDAVRDYLESQGLDTDQLL-VDAYGDLEPLKSEQNFESDFFDRRVTLR 239
>gi|207108745|ref|ZP_03242907.1| flagellar motor protein MotB [Helicobacter pylori HPKX_438_CA4C1]
Length = 150
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 67 RIGDMITCYIPVHVSFVS--EVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIG-- 121
+I +P + F + + + + L+ IA I+ K P V I ++ TD
Sbjct: 1 QIDQGSILKLPSSLLFENATSDAINQDMMLYLERIAKIIQKLPKRVHINVRGFTDDTPLV 60
Query: 122 --TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
K++ ++ RA + LI + +S + PI ND+ R N R+E
Sbjct: 61 KTRFKSHYELAANRAYRVMKVLI-QYGVDPNQLSFSSYGSTNPIAPNDSLENRMKNNRVE 119
Query: 180 I 180
I
Sbjct: 120 I 120
>gi|118589971|ref|ZP_01547375.1| flagellar motor protein MotB [Stappia aggregata IAM 12614]
gi|118437468|gb|EAV44105.1| flagellar motor protein MotB [Stappia aggregata IAM 12614]
Length = 500
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 11/159 (6%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH----VSFVSEVF 87
+ +++ R L + E + + I V+R G+ + + +
Sbjct: 342 TESSAEVLVARLSEVLAQTEGTVLEETA-SQITVTREGEGALISLTDDQNFGMFAIGSAE 400
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERADVIKSYLIQR 144
+ + +L+ I I+ P I I+ HTD+ +N +S RA + L +
Sbjct: 401 PRPELVKLLERIGKIVADTPG-QIVIKGHTDARPFRSKTYDNWRLSSARAHMALYMLSRG 459
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
GV +RF V G+A K +D +N+RIEI +
Sbjct: 460 GVGKDRFNRVEGYADKDLKVPSDPFA--ASNRRIEIYLL 496
>gi|238795889|ref|ZP_04639402.1| Outer membrane protein A [Yersinia mollaretii ATCC 43969]
gi|238720352|gb|EEQ12155.1| Outer membrane protein A [Yersinia mollaretii ATCC 43969]
Length = 350
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + D IG NL +SQ RA
Sbjct: 223 SDVLFAFNKSTLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQRRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
D ++ YL+ + I+ RG P+ N ++R+EI++
Sbjct: 283 DSVRDYLVSK-GIPADKITARGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIEV 338
>gi|190892104|ref|YP_001978646.1| outer membrane protein, OmpA family [Rhizobium etli CIAT 652]
gi|190697383|gb|ACE91468.1| putative outer membrane protein, OmpA family [Rhizobium etli CIAT
652]
Length = 722
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 7/133 (5%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIA 112
L + + + + L+ +A +L K PS
Sbjct: 583 SLDEVKYSARIRDKVRRIDLDTITFATGSAEIPMTQARTLRKVADAISQVLKKDPSETFL 642
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD++G+ ++NL++S +RA+ + + L ++ +G+ +Y
Sbjct: 643 IEGHTDAVGSDQSNLVLSDQRAESVANVLSDVYGIPPENMATQGYGERYLKVNTAGPE-- 700
Query: 173 QNNQRIEI-QIFP 184
Q N+R+ I ++ P
Sbjct: 701 QENRRVTIRRVTP 713
>gi|148976136|ref|ZP_01812879.1| outer membrane protein [Vibrionales bacterium SWAT-3]
gi|145964531|gb|EDK29785.1| outer membrane protein [Vibrionales bacterium SWAT-3]
Length = 277
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 60/155 (38%), Gaps = 12/155 (7%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + + + + + + + + K++
Sbjct: 119 LNELELQLDYVTSQARCEPPKNENQFRMQLSIIQQLYDLLNVDNQFAHNSIEVNPKYMGK 178
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + IL S + + H+D+ G+ + N ++ RA ++ YL G+S +R +V
Sbjct: 179 LAEASYILKDNKSLELIVTGHSDATGSEEYNDKLALGRAQQVERYLTIFGLSPSRIKAVS 238
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
P+ +++ R N+R+ I++ N K
Sbjct: 239 -VGETVPLFEGESEGTRLTNRRVSIEVISPENAAK 272
>gi|319778081|ref|YP_004134511.1| ompa/motb domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171800|gb|ADV15337.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 176
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 61/179 (34%), Gaps = 14/179 (7%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ ++ + +K + + + K G + AE+ + +
Sbjct: 7 AFVLAVVLFSTHASADPVQKSEDIVKFFAGAADLGKSRGICVGSAEECKSKSNDASAV-- 64
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTL 123
+ G + + L+ L A L + ++ +TD+ GT+
Sbjct: 65 -KTGLDMLIN-----FGLDSAELDATARAELDEFAKALKDNRLSTFSFVVEGYTDATGTV 118
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +SQ RA + + + I+ G K P +N N+R+E++I
Sbjct: 119 HHNEGLSQRRAKSVAA-FLTASGIEPDRINAVGMGEKNPRSSNPYD---PLNRRVEMRI 173
>gi|320107209|ref|YP_004182799.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4]
gi|319925730|gb|ADV82805.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4]
Length = 257
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 1/108 (0%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ L + Q A+ L P+ + I + D G+ + NL + + RA
Sbjct: 149 NVQDVFFDYDSYDLRLDAGALAQRAASYLAAHPAIKVVIGGYCDERGSAEYNLALGENRA 208
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + S + V + + T + Q N+R + +
Sbjct: 209 NAA-KTALVTAGVSPNRLRVISYGKEKQFCTEQNETCYQQNRRAQFSL 255
>gi|269105139|ref|ZP_06157833.1| lipoprotein precursor OmpA family [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268160589|gb|EEZ39088.1| lipoprotein precursor OmpA family [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 210
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L + +L + + S + I+ HTDS+GT N + RA +
Sbjct: 108 VYFNFDNSKLTSASIYILNKLIENVKASKSNYL-IEGHTDSVGTTSYNKDLGYRRAKSVI 166
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + GV+ ++ + P++TNDT +GR N+R+EI+
Sbjct: 167 EFFVGNGVNRSQLQGIS-EGELKPLETNDTSIGRSYNRRVEIK 208
>gi|54307571|ref|YP_128591.1| hypothetical protein PBPRA0350 [Photobacterium profundum SS9]
gi|46911994|emb|CAG18789.1| hypothetical protein PBPRA0350 [Photobacterium profundum SS9]
Length = 253
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 2/158 (1%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
K + +D E + V ++ + ++
Sbjct: 74 DKDAEITLLQYQTQQAVIQTQMDWLE-YHTTCFDHSYSEVELKEKLLVFMALDNQFALNR 132
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L + L+ ATIL + + + HTDS+GT NN+ + +RA +K +LI++
Sbjct: 133 AELLPDYQQALRYAATILKRQSHWHLQLTGHTDSLGTSDNNIQLGMKRASAVKRFLIEQ- 191
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ I++ +D ++ R N+++E Q+
Sbjct: 192 GVKSNQIAIFSAGESMSMDDTHSRTQRLANRKVEAQVL 229
>gi|149376619|ref|ZP_01894379.1| Flagellar motor protein [Marinobacter algicola DG893]
gi|149359137|gb|EDM47601.1| Flagellar motor protein [Marinobacter algicola DG893]
Length = 260
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 54/153 (35%), Gaps = 7/153 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
+ + S + + + + D+ EF + + + + + + + F
Sbjct: 90 TEAPQNPSMNAEGRTEALRAMADQLALEFDELINQGVVTLETSDEWLELSLRNSLLFGSG 149
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSY 140
+ +++ IA +L I ++ TD+ + N +S R+ +
Sbjct: 150 DAEPHYDAFDVVEKIAAVLR-NRDNAIRVEGFTDNRPINTSAFPSNWELSAARSAAVVRM 208
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ ++ G+ P+ NDT+ GR+
Sbjct: 209 -LSMEGVEAERLAAVGYGEHQPVARNDTEEGRR 240
>gi|289648637|ref|ZP_06479980.1| flagellar motor protein MotB [Pseudomonas syringae pv. aesculi str.
2250]
Length = 350
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 15/183 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ ++ +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPLEAETSETKAEEVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NL 127
I + L+ F +L +A + P+ I+I HTD+ + N N
Sbjct: 158 IMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN-KISISGHTDATPFVGNGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S RA+ + L+ ++ V G+A + ++ N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDHENPTN-PVNRRIDIVVLTKKA 274
Query: 188 IKK 190
++
Sbjct: 275 QQR 277
>gi|289623746|ref|ZP_06456700.1| flagellar motor protein MotB [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|330865884|gb|EGH00593.1| flagellar motor protein MotB [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 344
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 15/183 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ ++ +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPLEAETSETKAEEVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NL 127
I + L+ F +L +A + P+ I+I HTD+ + N N
Sbjct: 158 IMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN-KISISGHTDATPFVGNGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S RA+ + L+ ++ V G+A + ++ N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDHENPTN-PVNRRIDIVVLTKKA 274
Query: 188 IKK 190
++
Sbjct: 275 QQR 277
>gi|71282015|ref|YP_270145.1| sodium-type flagellar protein MotY [Colwellia psychrerythraea 34H]
gi|71147755|gb|AAZ28228.1| sodium-type flagellar protein MotY [Colwellia psychrerythraea 34H]
Length = 291
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKS 139
S K +++I L+ P + I +++DS G +NL +S+ RA I+
Sbjct: 187 YQSSSDKFTKASQRRIEMIRQYLSLDPELELVLIDAYSDSYGGRWSNLKLSERRAAKIRD 246
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
Y ++ G+ +R I +G+ K I +NDT +GR N+R+ IQ
Sbjct: 247 YFVENGIEVSR-IEAKGYGEKRHISSNDTTLGRGKNRRVVIQ 287
>gi|298484924|ref|ZP_07003023.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298160611|gb|EFI01633.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 341
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 15/183 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ ++ +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPLEAETSETKAEEVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NL 127
I + L+ F +L +A + P+ I+I HTD+ + N N
Sbjct: 158 IMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN-KISISGHTDATPFVGNGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S RA+ + L+ ++ V G+A + ++ N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDHENPTN-PVNRRIDIVVLTKKA 274
Query: 188 IKK 190
++
Sbjct: 275 QQR 277
>gi|167841641|ref|ZP_02468325.1| ompA family protein [Burkholderia thailandensis MSMB43]
Length = 224
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 48/121 (39%), Gaps = 9/121 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + V+ +TD IG+ K N +S RA +
Sbjct: 99 DTLFDFDKAILKPAGKQKLDELASKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK--------VGRQNNQRIEIQIFPRGNIK 189
KSYL+ + + G + P+ N K ++R+E+++ ++
Sbjct: 159 KSYLVSK-GVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGTQEVQ 217
Query: 190 K 190
K
Sbjct: 218 K 218
>gi|294670740|ref|ZP_06735604.1| hypothetical protein NEIELOOT_02451 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307548|gb|EFE48791.1| hypothetical protein NEIELOOT_02451 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 278
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 11/138 (7%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFV--SEVFLEKKFLPMLQLIATILNKFPST-VI 111
+ ++ I +F + + L +A L + +
Sbjct: 133 AQEQPAPAMMAQPQMQRIVLSADALFAFDKGDLAHMNAQGKAELDDVAAKLGRLERLDQV 192
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I HTD +G+ N+ +SQ+RA+ +++YLI R + G P+ D +
Sbjct: 193 RIIGHTDYLGSDSYNMRLSQQRAETVRNYLISR-GVPANVLYAYGAGETQPVKQCDNRGN 251
Query: 172 RQN-------NQRIEIQI 182
R N+R+E+++
Sbjct: 252 RAELIACLQPNRRVELEV 269
>gi|260576195|ref|ZP_05844188.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259021675|gb|EEW24978.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 507
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 56/174 (32%), Gaps = 19/174 (10%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-----------DMITCY 75
+ + + + ++ G V+ D ++
Sbjct: 326 EAQASVAAAGYVDRAPERQPMTADGLRLINAIRGAGADVTLDDLKRLADLMVGADRLSLT 385
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQER 133
L+ L +A +L +F + + +D G NL +SQ R
Sbjct: 386 FR---FEDGSTTLDAHSRDNLADLARLLAVGEFRGQDMVLAGFSDGAGDAAANLALSQAR 442
Query: 134 ADVIKSYLIQRGVSSNRFIS---VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
A+ + + L + + + F P+ + T GR+ N+R+E+ + P
Sbjct: 443 AEGVLAALTKATPDLPEGQALPRIEAFGEALPMACDTTAAGRRLNRRVEVWLRP 496
>gi|71737470|ref|YP_272857.1| flagellar motor protein MotB [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558023|gb|AAZ37234.1| motility protein, MotA family [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 341
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 15/183 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ ++ +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPLEAETSETKAEEVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NL 127
I + L+ F +L +A + P+ I+I HTD+ + N N
Sbjct: 158 IMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN-KISISGHTDATPFVGNGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S RA+ + L+ ++ V G+A + ++ N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDHENPTN-PVNRRIDIVVLTKKA 274
Query: 188 IKK 190
++
Sbjct: 275 QQR 277
>gi|261415252|ref|YP_003248935.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371708|gb|ACX74453.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325746|gb|ADL24947.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 654
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ V + ++ L +A L + I I SHTD++ + + +++ +R
Sbjct: 476 FILQGVTFGVGQSKFTRESSDGLNRLAAHLRNYNGKTIEIVSHTDNLDRPERSRVLALKR 535
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
A+ +KSYL+ G+S I+ G P+ N T R N RIE+ ++
Sbjct: 536 AEEVKSYLVMAGLSGQDIIAT-GKGGDEPLVPNTTPDNRMKNNRIEVFVYS 585
>gi|126463896|ref|YP_001045009.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126105707|gb|ABN78237.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 254
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 59/162 (36%), Gaps = 4/162 (2%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
AS + + ++ D + + + + + + + +H
Sbjct: 94 TASTDSAPGETGRPVLGLPQGADRLAAADPLPER-RETAEVSPESFGLLDPALQVNVRIH 152
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
SF L P+L + T++ + I HTD+ G+ N +S RA+ ++
Sbjct: 153 FSF-DSAVLAADQTPLLAQLCTVMKASDIRLFQIVGHTDAAGSEAYNQQLSLLRAEEVRR 211
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
YL + + G ++ D D + G N+R+E Q
Sbjct: 212 YLTGPCGIAPERLRAVGMGERFLADKKDPRSG--ENRRVEFQ 251
>gi|330984570|gb|EGH82673.1| flagellar motor protein MotB [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 344
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 15/183 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ ++ +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPLEAETSETKAEEVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NL 127
I + L+ F +L +A + P+ I+I HTD+ + N N
Sbjct: 158 IMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN-KISISGHTDATPFVGNGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S RA+ + L+ ++ V G+A + ++ N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDHENPTN-PVNRRIDIVVLTKKA 274
Query: 188 IKK 190
++
Sbjct: 275 QQR 277
>gi|297184084|gb|ADI20203.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
Length = 863
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 29/163 (17%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + L+ + + + +P +++ L ++ L + +IL + P+
Sbjct: 569 QVKEERAYLKSYSLRLEMDPIEVPIVLPNVFFDLAQSELREESKVALDTVFSILQRNPTI 628
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID----- 164
I ++SHTD T N ++SQ RA YLIQ+ + ++ G K P
Sbjct: 629 TIGLRSHTDYRDTDAKNDVLSQARAQSCVDYLIQK-GITAERLTAVGMGEKEPFVISTEY 687
Query: 165 -----------TNDTKV------------GRQNNQRIEIQIFP 184
N T+ Q N+R + ++
Sbjct: 688 KGYGVDKFKAGDNLTETFIKRLNKEDQEIANQINRRTDFKVLS 730
>gi|307730629|ref|YP_003907853.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|323526963|ref|YP_004229116.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|307585164|gb|ADN58562.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
gi|323383965|gb|ADX56056.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 215
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + V+ +TD IG+ K N +S RA +
Sbjct: 99 DALFDFDKAILKPAGKEKLDDLASKIQGLNLEVVVATGYTDRIGSDKYNDRLSLRRAQAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIF 183
K+YL+ + + I G + P+ T + R ++R+E+++
Sbjct: 159 KAYLVSK-GIESNRIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVV 210
>gi|117920854|ref|YP_870046.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117613186|gb|ABK48640.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 264
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 60/166 (36%), Gaps = 1/166 (0%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+++ + L + I K+ S AE + D + +
Sbjct: 90 TVKTQQQHIALQRQQLASISAKQQASEQRAAEYASTQKQLDELLAEQQQLLSELALGMNV 149
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
LE FLP L +A ++ + + + ++ + D G L N +S++R +
Sbjct: 150 QFRTGSSELESHFLPQLDNVAKVMKRSSESNLELKGYADRRGDLAYNQALSEQRLLEV-R 208
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + + I+ + F + P++ ++R+ + + P
Sbjct: 209 GYLIKQGVAPERITTQAFGARMPLNDQQDSESDVFDRRVTLTMQPN 254
>gi|260363440|ref|ZP_05776286.1| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|308113738|gb|EFO51278.1| outer membrane protein [Vibrio parahaemolyticus K5030]
Length = 166
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 54/163 (33%), Gaps = 6/163 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L + ++ +A E + + + A D +
Sbjct: 4 MK--LLLALSVIAVTQQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAGS 61
Query: 62 GIVVSRIGDMITCYIPVHV---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ G+ I + V + F ++ ++ L +P+T I +Q +
Sbjct: 62 EVDNDGCGEYIKASEKMQVRVLFANDSDEINPVFRRQIRELSDFLKDYPTTSIELQGYAS 121
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
G K+N +S+ RA ++ L+ + + GF +
Sbjct: 122 KTGGSKHNQDLSERRAKNVRDALLS-YGIEPNRVRIIGFGDTH 163
>gi|330939854|gb|EGH43087.1| flagellar motor protein MotB [Pseudomonas syringae pv. pisi str.
1704B]
Length = 333
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 61/178 (34%), Gaps = 15/178 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ + +R L + +++ Q Q I+ D +
Sbjct: 85 SPDTVPIEAENAETKAEAVEQERLEMLLQELQNKVQENPQLQKFKDQILFEITQDGLRIQ 144
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNL 127
I + L+ F +L +A + P+ ++I HTD+ N
Sbjct: 145 IMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN-KVSISGHTDATPFVGSGGFGNW 203
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S RA+ + L+ ++ V G+A + + N+RI+I + +
Sbjct: 204 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDHQNPTN-PINRRIDIVVLTK 259
>gi|270261236|ref|ZP_06189509.1| outer membrane protein A, precursor [Serratia odorifera 4Rx13]
gi|270044720|gb|EFA17811.1| outer membrane protein A, precursor [Serratia odorifera 4Rx13]
Length = 359
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD++G+ + N +S++RA
Sbjct: 230 SDVLFNFNKATLKPQGQQALDQLYSQLSSMDPKDGSVVVLGYTDAVGSDQYNQKLSEKRA 289
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--KVGR---------QNNQRIEIQI 182
+ YL+ + + IS RG + N K GR ++R+EI++
Sbjct: 290 QSVVDYLVSK-GIPSDKISARGMGEADSVTGNTCGYKAGRATKAQIACLAPDRRVEIEV 347
>gi|126731561|ref|ZP_01747367.1| OmpA/MotB [Sagittula stellata E-37]
gi|126708097|gb|EBA07157.1| OmpA/MotB [Sagittula stellata E-37]
Length = 220
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 57/171 (33%), Gaps = 12/171 (7%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
SGC S + + +D+ E TG + + +
Sbjct: 58 SGCTS-------DEFSGSATFTLDDVVNLGVIDRTEVPQNAAAGGTGGSTAAPAPLPSID 110
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + L + + L +A L + HTD +G+ N+ +S+ R
Sbjct: 111 L-EILFAYNSDDLTPEAMGKLSSLADALRDPRLSDARLVFIGHTDGVGSAAYNMDLSRRR 169
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
A+ + ++ I G + ++ D N+R+++ + P
Sbjct: 170 AEAVARFVQGTMGLPPSRIRAEGVGFSRLKNSFDPAA--AQNRRVQLVLVP 218
>gi|220913721|ref|YP_002489030.1| OmpA/MotB domain protein [Arthrobacter chlorophenolicus A6]
gi|219860599|gb|ACL40941.1| OmpA/MotB domain protein [Arthrobacter chlorophenolicus A6]
Length = 266
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/195 (13%), Positives = 60/195 (30%), Gaps = 15/195 (7%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN-----------KRFGSSLDKAED 52
+L S+ A V + D + + + E
Sbjct: 51 KLRNSLATGFGAVASQTADTASGTVVPPDQVNKDAEAFSSLDLAIKEVDKLTALQQQMET 110
Query: 53 EFQMQLQDTGIVVSRIGDMITCYI--PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ Q D+ + +T + L ++ +L I+ L
Sbjct: 111 ALKAQQLDSNVEFQISERGLTVKLVGSQAFFLPDRPELTRRASQVLDTISPTLAP-AGLE 169
Query: 111 IAIQSHTDSIGTLKN-NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I ++ H + T +S R+ + YL+ RG + I F ++ + T+
Sbjct: 170 IMVEGHAANGITAFPSTWELSSARSVNVLRYLVDRGGVAPGRIGAVAFGSARQVNDDSTE 229
Query: 170 VGRQNNQRIEIQIFP 184
+ N+R+++ +
Sbjct: 230 ELMELNRRVDVVVLS 244
>gi|121601320|ref|YP_993883.1| OmpA family protein [Burkholderia mallei SAVP1]
gi|167720677|ref|ZP_02403913.1| ompA family protein [Burkholderia pseudomallei DM98]
gi|167739663|ref|ZP_02412437.1| ompA family protein [Burkholderia pseudomallei 14]
gi|167816870|ref|ZP_02448550.1| ompA family protein [Burkholderia pseudomallei 91]
gi|167846773|ref|ZP_02472281.1| ompA family protein [Burkholderia pseudomallei B7210]
gi|167895360|ref|ZP_02482762.1| ompA family protein [Burkholderia pseudomallei 7894]
gi|167903747|ref|ZP_02490952.1| ompA family protein [Burkholderia pseudomallei NCTC 13177]
gi|254192034|ref|ZP_04898534.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|121230130|gb|ABM52648.1| OmpA family protein [Burkholderia mallei SAVP1]
gi|157987856|gb|EDO95621.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
Length = 209
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 9/121 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + V+ +TD IG+ K N +S RA +
Sbjct: 84 DTLFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAV 143
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK--------VGRQNNQRIEIQIFPRGNIK 189
KSYL+ + + G + P+ N K ++R+E+++ ++
Sbjct: 144 KSYLVSK-GVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGTQEVQ 202
Query: 190 K 190
K
Sbjct: 203 K 203
>gi|159184962|ref|NP_354858.2| OmpA family protein [Agrobacterium tumefaciens str. C58]
gi|159140240|gb|AAK87643.2| OmpA family protein [Agrobacterium tumefaciens str. C58]
Length = 746
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 7/133 (5%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI----LNKFPSTVIA 112
L + + + + L+ +A L K P+
Sbjct: 608 SLDEVRYSARIRDKVRRIDLDTITFATGSADIPMAQARSLRKVADAINKALQKNPAETFL 667
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD++G+ ++NL++S ERA + + L ++ +G+ +Y
Sbjct: 668 IEGHTDAVGSDESNLVLSDERAASVANVLTDVYGIPPENLATQGYGERYLKVQTLGPE-- 725
Query: 173 QNNQRIEI-QIFP 184
Q N+R+ I ++ P
Sbjct: 726 QQNRRVTIRRVTP 738
>gi|269962895|ref|ZP_06177235.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832449|gb|EEZ86568.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 301
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 56/179 (31%), Gaps = 25/179 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K L M ++GC N+ + ++ ++ L
Sbjct: 1 MKTTIRLLSGMIAGAILAGCS------------ADAYVSQENREKFADVNVSKFLISECL 48
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I + H F + + + L + I I HTD
Sbjct: 49 APQ--------REIHIAVAEHFDF-DKSIIREADAVSLDAFIRDIQGLSG-RITIVGHTD 98
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ + N +S RA+ +++YL Q+ V+ F P+ + R N+R
Sbjct: 99 FKGSDEYNEKLSMRRAESVEAYLQQQLDPEQYDWEVKHFGESQPLALGKSDQARAENRR 157
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 2/108 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ + L L L I + HTD +G+L N +++ RA + +Y
Sbjct: 191 FDFDKSELKPEDLSQLDDFIAKLQGLEG-SIMVAGHTDQVGSLSYNEELAERRAQTVVAY 249
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
L + S V+ F P+ ++ N+R +F +
Sbjct: 250 LKTKLDPSQFVWEVKAFGELQPVINEESPEANALNRRA-FIVFKESEL 296
>gi|330965971|gb|EGH66231.1| flagellar motor protein MotB [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 341
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 64/178 (35%), Gaps = 15/178 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ + +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPIEAETSETKAEAVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NL 127
I + L+ F +L +A + P+ I+I HTD+ + N N
Sbjct: 158 IMDADNRPMFDSGSARLKPYFEDILLALADTIRSVPN-KISISGHTDATPFVGNNGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S RA+ + L+ ++ V G+A + ++ N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDHENPTN-PVNRRIDIVVLTK 272
>gi|300024245|ref|YP_003756856.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299526066|gb|ADJ24535.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 602
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/169 (14%), Positives = 61/169 (36%), Gaps = 16/169 (9%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+ ++ + D+ L + + M +
Sbjct: 407 EGASDEAVYDALSAPPVDEFSDRYT------LDEIRATATLRDRMRRIDLDDINFEFGSW 460
Query: 87 FLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
++ L+ +A + + P+ V I+ +TD++G+ ++NL +S RA+ + L
Sbjct: 461 EVDPGEYRKLERVARAMKRVISRNPNEVFMIEGYTDAVGSQEDNLSLSDRRAESVAEVLT 520
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ----IFPRGN 187
+ + +G+ Y T+ + N+R+ ++ + RG+
Sbjct: 521 EEFQVPFENLVTQGYGEDYLKVP--TQAAERLNRRVAVRRITPLLARGD 567
>gi|157959916|ref|YP_001499950.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157844916|gb|ABV85415.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 303
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQ 131
+ S L L + L PS V + + H D+ G NL++S+
Sbjct: 175 YLRRLEFLFAPSSSLLNAAHEQDLYAVYRYLQADPSIVEVLVDGHADASGDHLANLVLSK 234
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
ERAD + S LI+ S + I R + P+ +N++ GR+ N+R+ +++
Sbjct: 235 ERADEVVSRLIEL-GVSPKMIQTRHHGTRTPVASNNSTQGRELNRRVTLRLV 285
>gi|260712903|ref|YP_003226958.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIB
11163]
gi|258553429|gb|ACV76374.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 273
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 77/220 (35%), Gaps = 40/220 (18%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+ L + M +M + S + + + + + ++
Sbjct: 26 MVSFLFIVMLLMAFFA--SHYSDNQTIHHDPLEIYNAKSENIRHNIIMHLVEAVRADIKK 83
Query: 61 T---GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK------------ 105
G+ VS GD + + + L L +++L+ L
Sbjct: 84 EKIEGLEVSTQGDALRFQ-GNGLFASGQGGLSGNSLRIIKLLGHHLADFMPCFAVGSKGA 142
Query: 106 -----FPST----VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR------ 150
P + ++ HTDS G+ +NNL++S RA + ++ +++
Sbjct: 143 VALSCNPDLVMLETVQVEGHTDSNGSHQNNLVLSTTRAISAFNEIVPDSKNNDMPEMLEF 202
Query: 151 -------FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++V G+ P+ N T VGR N+RI+++
Sbjct: 203 QNLLGQPIMAVAGYGEMRPVGNNATAVGRAANRRIDMRFI 242
>gi|238785957|ref|ZP_04629921.1| Outer membrane protein A [Yersinia bercovieri ATCC 43970]
gi|238713147|gb|EEQ05195.1| Outer membrane protein A [Yersinia bercovieri ATCC 43970]
Length = 350
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + D IG NL +SQ RA
Sbjct: 223 SDVLFAFNKSTLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQRRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
D ++ YL+ + I+ RG P+ N ++R+EI++
Sbjct: 283 DSVRDYLVSK-GIPAEKITARGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIEV 338
>gi|221640665|ref|YP_002526927.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
gi|221161446|gb|ACM02426.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
Length = 485
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNN 126
D ++ LE + L + +L +F + + +D G + N
Sbjct: 365 ADRLSITFR---FEEGTDSLEPQSRESLSELIKLLEIGRFRGQQLMLIGFSDGRGPARAN 421
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
L +S+ERA+ + + L + + V GF P+ + T GR+ N+R+E+ + P
Sbjct: 422 LDLSRERAETVAAALREAVPVLGPPL-VEGFGEALPLACDTTVAGRRMNRRVELWLRP 478
>gi|315266048|gb|ADT92901.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 365
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L F+ LQ+I L +FP + ++ ++DS G+ + NL +S+ R D I
Sbjct: 253 VLFNFDSSELF--FVDSLQIIINRLIQFPQATVILRGYSDSQGSSEYNLALSKRRTDSIT 310
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + I + +YP+ ++ + N+R++ + P+ I+
Sbjct: 311 Q-YLTEHGVKPQQIIAEHYGEQYPVTDKISEQHKHLNRRVQ-VLLPQTIIQ 359
>gi|160873823|ref|YP_001553139.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|160859345|gb|ABX47879.1| OmpA/MotB domain protein [Shewanella baltica OS195]
Length = 369
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L F+ LQ+I L +FP + ++ ++DS G+ + NL +S+ R D I
Sbjct: 257 VLFNFDSSELF--FVDSLQIIINRLIQFPQATVILRGYSDSQGSSEYNLALSKRRTDSIT 314
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + I + +YP+ ++ + N+R++ + P+ I+
Sbjct: 315 Q-YLTEHGVKPQQIIAEHYGEQYPVTDKISEQHKHLNRRVQ-VLLPQTIIQ 363
>gi|217970135|ref|YP_002355369.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
gi|217507462|gb|ACK54473.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
Length = 232
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 15/166 (9%)
Query: 31 HKSNDTDIVNK-RFGSSLDK---AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+ T + G + DK D+ ++ D + + +
Sbjct: 66 PAAASTALAGDLPVGCACDKDIVPADKCTVKAAAAAPGPKPTADKVKLSA-DALFDFDKA 124
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
L+ + L +A VI HTD +G+ N +S+ RA +K+YL+ +GV
Sbjct: 125 VLKAEGKAKLDQLAAQAKSLKLEVILAVGHTDRLGSNTYNQRLSERRAAAVKTYLVSKGV 184
Query: 147 SSNRFISVRGFAYKYPIDTNDTKV--GRQN-------NQRIEIQIF 183
+NR + G P+ N GR ++R+E+++
Sbjct: 185 DANRVYT-EGKGETQPVTGNKCDKVGGRAAQISCLQPDRRVEVEVI 229
>gi|225620698|ref|YP_002721956.1| OmpA family protein [Brachyspira hyodysenteriae WA1]
gi|225215518|gb|ACN84252.1| OmpA family protein [Brachyspira hyodysenteriae WA1]
Length = 213
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/195 (10%), Positives = 47/195 (24%), Gaps = 13/195 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + ++ I+ C + ++D ++ + +
Sbjct: 1 MKKLLFIFSLLIFVIAACKSTPTSTTPEDVVIADDPAPAVAEEEPKPEEVVADTKTLAYG 60
Query: 61 TGIVV--------SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ + I P + E + + L K P+ I
Sbjct: 61 SEELYLPMDTSIRDTERGRILETTPKVIFKFVETNMPATAEMSFNQVVEFLEKNPNVNIV 120
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+++HT + G + + + P ++
Sbjct: 121 LEAHTSNRGKAYPYNYNLSVVRAKNGKAYLLAKGIPSERVIESPLGEALPEYPTQNEL-- 178
Query: 173 QNNQRIEIQIFPRGN 187
+R E I
Sbjct: 179 ---RRYEFVIIANDE 190
>gi|166714360|gb|ABY87946.1| outer membrane protein [Acinetobacter sp. wpo2421]
Length = 319
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ + +A L+++P+ I+
Sbjct: 210 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSDIKPQYKSEIAKVAEKLSEYPNATARIE 269
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
HTD+ G K N +S RA+ +KS L+ +S +GFA+ PI
Sbjct: 270 GHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIA 319
>gi|54294009|ref|YP_126424.1| hypothetical protein lpl1070 [Legionella pneumophila str. Lens]
gi|53753841|emb|CAH15307.1| hypothetical protein lpl1070 [Legionella pneumophila str. Lens]
Length = 234
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 76/188 (40%), Gaps = 42/188 (22%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLI 99
S DK E + L+ G+ V+ + +P + F V + + ++ L +
Sbjct: 45 TEINESRDKILKEIEQSLKQEGVSVTIDIEQGVLRLPESILFGVDQYQVNEEGKIALSKL 104
Query: 100 ATILNKF-PSTVIA-----------------------IQSHTDSIGTLKNNLLISQERAD 135
A++L K+ P + I+ HTDS G+ ++N +S RA
Sbjct: 105 ASVLEKYLPCMAVTEEKFKSQCESLNLTSRDGLDAVFIEGHTDSTGSSEHNWYLSARRAI 164
Query: 136 VIKSYLIQ---------RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR- 185
+ + LI + ++ ++V G+ + PID N+ N+RIE++ R
Sbjct: 165 SVFNELIDAKPLLNVGLKNINGIPILNVSGYEARRPIDPNN----LSVNRRIELRFIMRS 220
Query: 186 ---GNIKK 190
+IK+
Sbjct: 221 PTPQDIKR 228
>gi|187735188|ref|YP_001877300.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835]
gi|187425240|gb|ACD04519.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835]
Length = 439
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 8/168 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
R+ V L + S E + Q I + + +
Sbjct: 271 GRKAGNVGLTVAKTDGQWLVAEASLDSMLEAYTKRQGAGDDIFIPIVKNPQGGDSLALFF 330
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+E L K+ LQ++A + + I HTD +G+ + N +S+ RA +K+ L
Sbjct: 331 GFNEDTLSKRSERQLQIVAEAIKMDSGKKLEISGHTDDVGSERYNQGLSERRAAAVKAQL 390
Query: 142 IQRGVSSNRFISVRGFAYKYPI------DTNDT-KVGRQNNQRIEIQI 182
+Q GV + R ++ +GF P +T R+ N+R E+ +
Sbjct: 391 VQFGVPAERIVT-KGFGKSQPRRTYSPTADEETRDEARKENRRAEMYL 437
>gi|289208674|ref|YP_003460740.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288944305|gb|ADC72004.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 253
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 61/197 (30%), Gaps = 19/197 (9%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
++ +M + L + ++ + + E+EF+ L +
Sbjct: 32 LMAALMMIFLFLALLHMVQVERSSAAHVEVRNEATALRAAIYSVLEEEFREDLPRWNAEL 91
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ----LIATILNKFPST--VIAIQSHTDS 119
R + P + S + +F +L A L F + I+ HT S
Sbjct: 92 DRDTLTLRFREPEVLFERSSASIRPRFETILDDFMPRYAEQLRPFADVIREVRIEGHTSS 151
Query: 120 IG--------TLKNNLLISQERADVIKSY-----LIQRGVSSNRFISVRGFAYKYPIDTN 166
N+ +SQ R + + +Q ++ G + +
Sbjct: 152 EWAGSDDAMDAYFGNMDLSQRRTRAVLEHAYRLEPLQEDDWFRSRVAAVGLSSSRRVLDA 211
Query: 167 DTKVGRQNNQRIEIQIF 183
D + + ++R+E +
Sbjct: 212 DGQEDHEASRRVEFSVL 228
>gi|90422620|ref|YP_530990.1| flagellar motor protein MotB [Rhodopseudomonas palustris BisB18]
gi|90104634|gb|ABD86671.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 423
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 56/166 (33%), Gaps = 6/166 (3%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A + + + +++ A T + + G +I+ V+
Sbjct: 255 APGNRPAGARGDTTPAANAAGKLQATITAALATLGAARPVTEVRETTEGLLISLTDDVNY 314
Query: 81 --SFVSEVFLEKKFLPMLQLIATILNKFPSTVIA--IQSHTDSIGTLKNNLLISQERADV 136
+ L I ++ + +I + +N +S RA +
Sbjct: 315 GMFATGSAAPSPGLVRALDKITPLIAQNRGQMIVRGHTDNRAYRSAEYDNWRLSTARAHM 374
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
LI+ G+ + R + G+A + P D ND N+RIE+ I
Sbjct: 375 AYYMLIRGGLDAGRIERIEGYADRRPKDPNDPSA--APNRRIELLI 418
>gi|332291918|ref|YP_004430527.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332170004|gb|AEE19259.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 306
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 3/133 (2%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ--LIATILNKFPST 109
++ L T + I + + V E + LQ I+ L+K
Sbjct: 174 NQANGDLDATNTALQDIENSLRADPLVLYFNYGEASVTLSEKKRLQIGDISCYLDKKEGA 233
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I ++ HTDS G+L N + ERA+ + I + PI+TNDT+
Sbjct: 234 TITVEGHTDSQGSLTTNDRLGLERAEFA-KAYLANNGIPESKIKTVSKGERSPIETNDTE 292
Query: 170 VGRQNNQRIEIQI 182
G N+R I +
Sbjct: 293 EGHNKNRRAVITL 305
>gi|222475318|ref|YP_002563735.1| Peptidoglycan-associated lipoprotein precursor [Anaplasma marginale
str. Florida]
gi|222419456|gb|ACM49479.1| Peptidoglycan-associated lipoprotein precursor [Anaplasma marginale
str. Florida]
Length = 255
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 43/189 (22%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+ L L ++GCGL S+EK + + +
Sbjct: 20 MLHRWLALCFLASFAVTGCGLFSKEKVGMDIVGVPFSAG--------------------- 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ ++ ++ +L + + + + I HTDS
Sbjct: 59 ---------------RVEKVYFDFNKYEIKGSGKKVLLGLVERMKADKRSTLLIIGHTDS 103
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP---IDTND---TKVGRQ 173
GT + NL + + RA+ +K +++ S + IS + P + ++D +
Sbjct: 104 RGTEEYNLALGERRANAVKEFILGCDRSLSPRISTQSRGKAEPEVLVYSSDFKEAEKAHA 163
Query: 174 NNQRIEIQI 182
N+R+ + +
Sbjct: 164 QNRRVVLIV 172
>gi|325286811|ref|YP_004262601.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324322265|gb|ADY29730.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 643
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 48/127 (37%), Gaps = 9/127 (7%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V + + L + L TI+ KFP + I+SHTDS G
Sbjct: 514 VVEKEGKSMLKLNKFIFKTKSSKLTPDIIKELDKAITIIKKFPEFNLQIESHTDSKGGSS 573
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG-------RQNNQR 177
+N ISQ RAD IK YL+ G+ S + G+ + N G N+R
Sbjct: 574 SNFRISQARADNIKKYLLNNGIPSKNILYTIGYGEDH--VLNKCVNGVYCIDYFHAENRR 631
Query: 178 IEIQIFP 184
I +
Sbjct: 632 CNIVVLN 638
>gi|319778099|ref|YP_004134529.1| type IV / vi secretion system protein, dotu family [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317171818|gb|ADV15355.1| type IV / VI secretion system protein, DotU family [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 440
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 10/143 (6%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
A + + L T VS I P + S L + F P++ +A ++
Sbjct: 300 APADLRSALSGTE-SVSLAKLTIQASNPE-LFQSSRPQLTEGFEPLIGSLAKVILANQEL 357
Query: 110 --VIAIQSHTDSIGTLKNN-----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
I + HTDS+ K N +S+ RA I L+Q GV +R S G A P
Sbjct: 358 IGNITVVGHTDSVPLQKTNPLSTNQRLSEARAQTIADMLVQNGVPRDRVHS-EGRAATDP 416
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
+ T+ T+ GR N+R+E+ + R
Sbjct: 417 VATDSTREGRALNRRVEVLVEKR 439
>gi|90410140|ref|ZP_01218157.1| hypothetical protein P3TCK_05216 [Photobacterium profundum 3TCK]
gi|90329493|gb|EAS45750.1| hypothetical protein P3TCK_05216 [Photobacterium profundum 3TCK]
Length = 237
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 67/205 (32%), Gaps = 25/205 (12%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ +F+ +++ A E+ K+ + + + LD+ E + G +
Sbjct: 30 LMMVFLFISVALMRDAMIERDKIKEVAVTYEENQQAIYLALLDEFESDLNK----WGAEI 85
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPST--VIAIQSHTDS 119
R P + L +F +L LN + + + I+ HT S
Sbjct: 86 DRESLSFNFTAPEVLFANGRASLTPQFQVILDDFFPRYLQALNTYKPSIQEVRIEGHTSS 145
Query: 120 IGT--------LKNNLLISQERADVIKSYL-------IQRGVSSNRFISVRGFAYKYPID 164
NN+ +SQ R + SY+ I ++ G++ I
Sbjct: 146 RWNNGSTDSEAYFNNMRLSQSRTRTVLSYVMALEPVKINHYDWVKGHVAAVGYSSSKTIV 205
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNIK 189
D + ++R+ ++ +
Sbjct: 206 NTDGIEDEKKSRRVSFRVITNAETQ 230
>gi|332881530|ref|ZP_08449179.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332680528|gb|EGJ53476.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 377
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 55/145 (37%), Gaps = 3/145 (2%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFG-SSLDKAEDEFQMQLQD--TGIVVSRIGDMIT 73
GC A + S + + K + K + Q L D V + +
Sbjct: 214 GCSHADQIAALNATISSMEAEAAGKDRALQNAQKTISDLQKDLNDCKNKKVPTTTTQAVE 273
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
V + S ++ +P + +A+ L K S ++I + G K N +S++R
Sbjct: 274 KSEYVVIFRQSSSKVDALQMPNIDRLASYLKKNSSAKVSISGYASPEGNAKFNQKLSEKR 333
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFA 158
A+ +K+ L++ S I +G
Sbjct: 334 AEAVKNILVKEYGISANRIETQGKG 358
>gi|149912933|ref|ZP_01901467.1| OmpA/MotB [Roseobacter sp. AzwK-3b]
gi|149813339|gb|EDM73165.1| OmpA/MotB [Roseobacter sp. AzwK-3b]
Length = 512
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 57/161 (35%), Gaps = 13/161 (8%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--------SFVSEV 86
+ ++ D F + G V + +
Sbjct: 351 AGFVDQAPEEIEINAQGDRFANAITQAGSEVGLEELQRMVALLSPLRRLTTTFRFEAGSA 410
Query: 87 FLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI-- 142
L+ + +Q +A L + + + +D G N I+++RA+ +K+ +I
Sbjct: 411 RLDAQSRSNVQQLARALEIGLYDARRLVFVGFSDGEGPAAGNRRIAEQRAEAVKTAVIAA 470
Query: 143 -QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ S I F P+ +D++ GRQ N+R+E+ +
Sbjct: 471 AETANLSRITIETAAFGEAMPMACDDSEWGRQVNRRVEVWV 511
>gi|186475502|ref|YP_001856972.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184191961|gb|ACC69926.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 215
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + V+ +TD IG+ K N +S RA +
Sbjct: 99 DTLFDFDKAILKPAGKEKLDDLASKIQGLNLEVVVATGYTDRIGSDKYNDRLSLRRAQAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIF 183
K+YL+ + I G + P+ T + R ++R+E+++
Sbjct: 159 KAYLVSK-GIEANRIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVV 210
>gi|294140610|ref|YP_003556588.1| OmpA family protein [Shewanella violacea DSS12]
gi|293327079|dbj|BAJ01810.1| OmpA family protein [Shewanella violacea DSS12]
Length = 252
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 62/170 (36%), Gaps = 5/170 (2%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSL---DKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
E +++ L + T + SL + Q +L + + + + +
Sbjct: 79 TEMESQQLKLTEQASTINLLNEDNQSLAIISNQYESLQDELTELRLARQQKLTELELGLN 138
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ LE F P L +A++L + + + D G N +S++R +
Sbjct: 139 IQ-FKTGSSQLETHFQPQLDELASVLRISNDLRLDLMGYADRRGESTYNQALSEQRVAEV 197
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
KSYL+ + + ++ + P+ + ++R+ I+ +
Sbjct: 198 KSYLLTK-GVDEKKLAASAYGASAPLTAEQSFENDFFDRRVTIRFVSQDT 246
>gi|90418368|ref|ZP_01226280.1| putative chemotaxis protein motB [Aurantimonas manganoxydans
SI85-9A1]
gi|90338040|gb|EAS51691.1| putative chemotaxis protein motB [Aurantimonas manganoxydans
SI85-9A1]
Length = 413
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 67/166 (40%), Gaps = 11/166 (6%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A E + F + F++ + G+ +S D + +
Sbjct: 252 ADGEAVAQADRADELKAEIAAEFARQGEPLPTNFEVVPGEGGVTISIADD-----MMSGM 306
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERADVI 137
V + + M++ IA++L+K P ++I+ HTDS +N +S RA +
Sbjct: 307 FEVGSARPTPQVVAMMERIASVLSKQPG-NVSIRGHTDSRPFRSAQYDNWRLSTARAHMA 365
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L + G+ +R ++ G A + P +D + N+RIEI +
Sbjct: 366 YYMLARGGLDEDRVKAIEGVADRAPKIADDPEA--AANRRIEILLT 409
>gi|228018099|gb|ACP52728.1| fibronectin-binding protein [Campylobacter coli]
Length = 224
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
E+ K ++K S E+ G ++ G T Y+ H F
Sbjct: 86 EQTKEVVNKPQVVTPAPAPVVSQSKSPEE------PREGALLDENGCEKTIYLEGHFDF- 138
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+V + F ++ IA IL++ ++ HTD+IG+ N +S+ RA+ + ++
Sbjct: 139 DKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAKE-LE 197
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ I G+ P +NDTK
Sbjct: 198 KFGVDKSRIQTVGYGQDKPRSSNDTKE 224
>gi|212637766|ref|YP_002314291.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212559250|gb|ACJ31704.1| OmpA [Shewanella piezotolerans WP3]
Length = 301
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQ 131
+ S L L ++ + + + I H D+ G NL++S+
Sbjct: 175 YVRRLDLLFDTSSSHLNTVHSKDLVAVSRYIEADSTIAEVLIDGHADASGNRIANLVLSK 234
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
ERAD + S LI+ R I VR + PI N+ + GR+ N+R+ I++
Sbjct: 235 ERADEVASMLIEL-GVPARMIQVRHHGTRAPIAANNNQQGRELNRRVSIRLV 285
>gi|257091971|ref|YP_003165612.1| hypothetical protein CAP2UW1_0326 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044495|gb|ACV33683.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 214
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 12/153 (7%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF 106
+K + L + I V F + L+ +L+ + L +
Sbjct: 58 EKRRMALEKALAIPLATGRVTLNNGRIGISGSVLFALNSDQLQPAGRLLLKSLVAPLRVY 117
Query: 107 ---PSTVIAIQSHTDSIGTLK------NNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
++ + TD + +N +S +RA + LI + I F
Sbjct: 118 LGERDELLMVSGFTDDVPIQHGNSRFVDNWELSAQRALTVTRALIDE-GMPSSLIFAAAF 176
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPRG-NIK 189
+ P+ +N GR N+R+E+ P+ N+K
Sbjct: 177 GTEQPVASNADDRGRSQNRRVEMAPVPKASNVK 209
>gi|167619124|ref|ZP_02387755.1| OmpA family protein [Burkholderia thailandensis Bt4]
gi|257138357|ref|ZP_05586619.1| OmpA family protein [Burkholderia thailandensis E264]
Length = 209
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 9/121 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + V+ +TD IG+ K N +S RA +
Sbjct: 84 DTLFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAV 143
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK--------VGRQNNQRIEIQIFPRGNIK 189
KSYL+ + + G + PI N K ++R+E+++ ++
Sbjct: 144 KSYLVSK-GVPANKVYTEGKGKRNPITGNTCKQKNRKQLIACLAPDRRVEVEVVGTQEVQ 202
Query: 190 K 190
K
Sbjct: 203 K 203
>gi|330447921|ref|ZP_08311569.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492112|dbj|GAA06066.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 332
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 63/181 (34%), Gaps = 17/181 (9%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G ++ + S +T S E+ + I V + +
Sbjct: 108 GNGDGPERDALIPGSFETQAQLAVLAS---VVEETAKQVSAQGNISVDVTPQGLRIILQD 164
Query: 79 HV----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-----TDSIGTLKNNLLI 129
L F +L IA I + +++I I H S + N +
Sbjct: 165 DFKQNMFHRGSANLTPFFEDVLLNIAPIFKQISNSLI-ISGHTDATQFKSKFSRSTNWEL 223
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF--PRGN 187
S RA+V + LI G+ SNR + V G A + ++ N+RIE+ I P N
Sbjct: 224 SSSRANVARQTLIAGGMPSNRVLQVAGMAERALLNKQSPDA--SENRRIELFILTTPAAN 281
Query: 188 I 188
I
Sbjct: 282 I 282
>gi|301064490|ref|ZP_07204897.1| OmpA family protein [delta proteobacterium NaphS2]
gi|300441407|gb|EFK05765.1| OmpA family protein [delta proteobacterium NaphS2]
Length = 275
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G V+ G + I + + ++ +F L A + P + +Q +TD++
Sbjct: 163 KGAKVNEYGCWV---IGDVLFDFDKANIKPEFYGQLDEAARVFEMNPGLKVEVQGNTDNV 219
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
GT K N+ +S RA+ + +YL++RGV +R ++ RG A P NDT GR
Sbjct: 220 GTYKYNMGLSLRRANAVLNYLVKRGVDRSR-LAARGSATHVP-SHNDTPEGRAL 271
>gi|261855636|ref|YP_003262919.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261836105|gb|ACX95872.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 358
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 14/181 (7%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAE------DEFQMQLQDTGIVVSRIGDMITC 74
++K + + KR + + E + + ++R G I
Sbjct: 111 TDQKKMTEEEARKKIEEEDKKRIENLKKELESLINVDPALKAYKDQIKLDMTRDGLRIQI 170
Query: 75 YIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS---IGTLKNNLLI 129
+ + +S LE +L+ +A ++NK P+ ++I HTDS G + N +
Sbjct: 171 IDQANRPMFKISSSRLEPYAAEILKKLAPVINKLPN-RLSITGHTDSLPYNGVDRTNWEL 229
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
S +RA+ + L+Q G ++ + V G A P +D R N+RI I + +
Sbjct: 230 SADRANAARRELVQDGYDESKLLRVVGMAAALPFIPSDPADPR--NRRISIIVMNDSAAE 287
Query: 190 K 190
+
Sbjct: 288 R 288
>gi|209516113|ref|ZP_03264972.1| OmpA/MotB domain protein [Burkholderia sp. H160]
gi|209503397|gb|EEA03394.1| OmpA/MotB domain protein [Burkholderia sp. H160]
Length = 228
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 59/170 (34%), Gaps = 11/170 (6%)
Query: 5 LGLSMFIMTTISGCGLASR-----EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+ +F+ + + + + + + + + + +
Sbjct: 40 TMMVLFLALYVLQLAKSKQLELRYQTLETKTVQQSAPAPAGGAQQDARKQLSALLDALRE 99
Query: 60 DTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I V+ + + I + F + L +L IA +L K + + ++ HTD
Sbjct: 100 KGLITVTDVPHGVEIGINAKILFNAGDARLLPDSFEVLNQIAQVLQKDSTGNVLVEGHTD 159
Query: 119 SIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
S+ +N +S RA + YL++R ++ G A +P+
Sbjct: 160 SVPISTAKYASNWELSSARAGAVVRYLVER-GIEPHRLAAIGRADNFPLV 208
>gi|167950567|ref|ZP_02537641.1| Cobyrinic acid ac-diamide synthase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 202
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
I R + ++ GF +PI N ++ GRQ N+R+ + I +G
Sbjct: 5 ISRLGVEPKRLAAIGFGEYHPIADNTSEAGRQKNRRVTLVIIGQG 49
>gi|255535771|ref|YP_003096142.1| OmpA/MotB [Flavobacteriaceae bacterium 3519-10]
gi|255341967|gb|ACU08080.1| OmpA/MotB [Flavobacteriaceae bacterium 3519-10]
Length = 427
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 52/162 (32%), Gaps = 8/162 (4%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+ G S ++ +N G D+ + +
Sbjct: 265 ASIGTTSMANRETTTVSLPAGQTLNAYRGGIEDQIVAFLNSEEYKNADETALKERW--FN 322
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L + L I IL +P I I +++D G N +S++RAD
Sbjct: 323 FDNLSFEFNSTKLTPESQTQLDNIKAILAAYPDAKIKIGAYSDKKGDDAANKTLSRQRAD 382
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYP-IDTNDTKVGRQNNQ 176
+KS L + IS G+ + + + R+ ++
Sbjct: 383 AVKSALAS-----AQVISAEGYGEERATVAETASDEEREKDR 419
>gi|187736002|ref|YP_001878114.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835]
gi|187426054|gb|ACD05333.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835]
Length = 478
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 65/176 (36%), Gaps = 17/176 (9%)
Query: 19 GLASREKKKVFLHKSNDTDI--------VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
AS K + D + S L + + +
Sbjct: 179 SSASPVTIKTAEPDMVNPDEWYNNKLKGAGGQDDSHLPDGSKSLSQLMAQSSLGKDSGYS 238
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ + + ++ ++ + +A ++ K P T+ ++ HTDS G+ + N ++S
Sbjct: 239 RLGADL---LFEYNKAVMKNSARLSMLQLAGLMMKNPDTIFIVEGHTDSFGSEEYNAVLS 295
Query: 131 QERADVIKSYLIQRGVSSNR-----FISVRGFAYKYPIDT-NDTKVGRQNNQRIEI 180
RA+ ++ +L G++ R + +R P+ + + + N+R+EI
Sbjct: 296 LMRANAVRQWLKDNGIALTRPNGECRLYIRACGSSRPVVSIRGDRDAQAANRRVEI 351
>gi|153875989|ref|ZP_02003535.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152067548|gb|EDN66466.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 58
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
R + ++ + +GF K PI TN T GRQ N+R+EI I G
Sbjct: 1 MRRAKTVRNYLINRGINSERLIAKGFGEKQPIATNATNAGRQQNRRVEIIILNEG 55
>gi|120554886|ref|YP_959237.1| flagellar motor protein MotD [Marinobacter aquaeolei VT8]
gi|120324735|gb|ABM19050.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 260
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 55/153 (35%), Gaps = 7/153 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
+ + D + + + ++ EF + + + + I +P + F
Sbjct: 90 TEAPRNPELDAEGRTEALRTMANQLAMEFDELINQGVVSLETSSEWIELNLPNSMLFGSG 149
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSY 140
+ +++ IA++L + ++ TD+ + N +S RA +
Sbjct: 150 DAEPHYDSFEVIEKIASVLR-NRDNAVKVEGFTDNQPIRTSRFPSNWELSTARAAAVARM 208
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ ++ G+ P+ NDT+ GR+
Sbjct: 209 -LMMEGIEPERLAAVGYGQYQPVARNDTEEGRR 240
>gi|311695186|gb|ADP98059.1| flagellar motor protein MotD [marine bacterium HP15]
Length = 260
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 55/153 (35%), Gaps = 7/153 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
+ + D + + D+ EF + + + + +P + F
Sbjct: 90 TEAPRNPEMDAQARTEALRAMADQLSMEFDELINQGVVSLETSDQWLELNLPNSLLFGSG 149
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ +++ IAT+LN + ++ TD+ +N +S RA +
Sbjct: 150 DAEPHYDAFEVVEKIATVLN-NRDNAVKVEGFTDNQPISTSRFPSNWELSAARAAAMVRM 208
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
L+ ++ G+ P+ NDT+ GR+
Sbjct: 209 LVME-GIEPERLAAVGYGQYQPVSRNDTEEGRR 240
>gi|167563638|ref|ZP_02356554.1| ompA family protein [Burkholderia oklahomensis EO147]
Length = 209
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 9/121 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + V+ +TD IG+ K N +S RA +
Sbjct: 84 DTLFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAV 143
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK--------VGRQNNQRIEIQIFPRGNIK 189
KSYL+ + + G + P+ N K ++R+E+++ ++
Sbjct: 144 KSYLVSK-GVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGTQEVQ 202
Query: 190 K 190
K
Sbjct: 203 K 203
>gi|6012949|emb|CAB57308.1| putative outer-membrane protein A [Pectobacterium carotovorum]
Length = 367
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 18/123 (14%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + +D +G+ + N +S++RA
Sbjct: 234 SDVLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFSDRLGSEQYNQALSEKRA 293
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI----DTNDTKVGRQN-----------NQRIE 179
+ YL+ + +S RG P+ N K GR ++R+E
Sbjct: 294 QSVVDYLVSK-GIPANKVSARGLGKSQPVTGSTCDNVYKQGRAATKAQLIDCLAPDRRVE 352
Query: 180 IQI 182
I++
Sbjct: 353 IEV 355
>gi|330978961|gb|EGH78020.1| flagellar motor protein MotB [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 346
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 61/178 (34%), Gaps = 15/178 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ + +R L + +++ Q Q I+ D +
Sbjct: 98 SPDTVPIEAENAETKAEAVEQERLEMLLQELQNKVQENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNL 127
I + L+ F +L +A + P+ ++I HTD+ N
Sbjct: 158 IMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN-KVSISGHTDATPFVGSGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S RA+ + L+ ++ V G+A + + N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDHQNPTN-PINRRIDIVVLTK 272
>gi|156976391|ref|YP_001447297.1| hypothetical protein VIBHAR_05164 [Vibrio harveyi ATCC BAA-1116]
gi|156527985|gb|ABU73070.1| hypothetical protein VIBHAR_05164 [Vibrio harveyi ATCC BAA-1116]
Length = 301
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 53/179 (29%), Gaps = 25/179 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K L M ++GC S + E + +
Sbjct: 1 MKTTIRLLSGMIAGAMLAGCS---------------------ADAYVSQENREKFADVNV 39
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I + + F+ + L + + I I HTD
Sbjct: 40 SKFLISECLAPQREIHFAVAEHFDFDKSFIREADAVSLDVFIRNIQGLSG-RITIVGHTD 98
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ + N +S RA+ +++YL Q+ V+ F P+ + R N+R
Sbjct: 99 FKGSDEYNDKLSMRRAESVEAYLQQQLDPEQYDWEVKHFGESQPLALGKSDQDRAENRR 157
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 2/108 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ + L L L I + HTD +G+L N +++ RA + +Y
Sbjct: 191 FDFDKSELKPEDLSQLDDFIAKLQGLEG-SIMVAGHTDQVGSLSYNEQLAERRAQTVVAY 249
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
L + S V+ F P+ ++ N+R +F +
Sbjct: 250 LKTKLDPSQFVWEVKAFGELQPVINEESPEANALNRRA-FIVFKESEL 296
>gi|86358030|ref|YP_469922.1| OmpA family membrane protein [Rhizobium etli CFN 42]
gi|86282132|gb|ABC91195.1| putative outer membrane protein, OmpA family [Rhizobium etli CFN
42]
Length = 738
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 7/133 (5%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIA 112
L + + + + L+ +A +L K PS
Sbjct: 599 SLDEVRYSARIRDKVRRIDLDTITFATGSAEIPMTQARTLRKVADAINQVLKKDPSETFL 658
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD++G+ ++NL++S +RA+ + + L ++ +G+ +Y +T
Sbjct: 659 IEGHTDAVGSDQSNLVLSDQRAESVANVLSDVYGIPPENMATQGYGERYLKV--NTPGPE 716
Query: 173 QNNQRIEI-QIFP 184
Q N+R+ I ++ P
Sbjct: 717 QENRRVTIRRVTP 729
>gi|261822111|ref|YP_003260217.1| outer membrane protein A [Pectobacterium wasabiae WPP163]
gi|261606124|gb|ACX88610.1| OmpA domain protein transmembrane region-containing protein
[Pectobacterium wasabiae WPP163]
Length = 361
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + TD +G+ + N +S++RA
Sbjct: 234 SDVLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRLGSEQYNQALSEKRA 293
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + +S RG P+ T D R ++R+EI++
Sbjct: 294 QSVVDYLVSK-GIPANKVSARGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIEV 349
>gi|167626141|ref|YP_001676435.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167356163|gb|ABZ78776.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 304
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQ 131
+ S L L + L S V I + H D+ G NL++S+
Sbjct: 175 YLRRIELLFAPSSSLLNNSHEQDLYAVYRYLQADSSIVEILVDGHADASGDHLANLVLSK 234
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
ERAD + S LI+ S + I R + P+ +N+ GR+ N+R+ +++
Sbjct: 235 ERADEVVSRLIEL-GVSAKMIQTRHHGTRAPVASNNNTEGRELNRRVTLRLV 285
>gi|56460901|ref|YP_156182.1| Sodium-type flagellar protein motY precursor [Idiomarina loihiensis
L2TR]
gi|56179911|gb|AAV82633.1| Sodium-type flagellar protein motY precursor [Idiomarina loihiensis
L2TR]
Length = 298
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L L+ I+ L + + ++TDS+G N ++++RA I+ + +
Sbjct: 192 DSEKLTLSSQRKLKQISDYLQVDNELELVLVDAYTDSLGARGPNQELTEQRAKEIQQFFV 251
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+RG+ + R +V P+ +ND ++ RQ N+R+ +Q+ +I+
Sbjct: 252 ERGIDAERIKTVA-HGEDRPVKSNDNEINRQINRRVIVQLTKPSSIE 297
>gi|134277521|ref|ZP_01764236.1| OmpA family protein [Burkholderia pseudomallei 305]
gi|134251171|gb|EBA51250.1| OmpA family protein [Burkholderia pseudomallei 305]
Length = 224
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 9/121 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A + V+ +TD IG+ K N +S RA +
Sbjct: 99 DTLFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK--------VGRQNNQRIEIQIFPRGNIK 189
KSYL+ + + G + P+ N K ++R+E+++ ++
Sbjct: 159 KSYLVSK-GVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGTQEVQ 217
Query: 190 K 190
+
Sbjct: 218 E 218
>gi|91784820|ref|YP_560026.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
LB400]
gi|91688774|gb|ABE31974.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 215
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + V+ +TD IG+ K N +S RA +
Sbjct: 99 DALFDFDKAILKPGGKEKLDDLASKIGSLNLEVVVATGYTDRIGSDKYNDRLSLRRAQAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIF 183
K+YL+ + + I G + P+ T + R ++R+E+++
Sbjct: 159 KAYLVSK-GIESNRIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVV 210
>gi|305666576|ref|YP_003862863.1| OmpA/MotB family outer membrane protein [Maribacter sp. HTCC2170]
gi|88708847|gb|EAR01082.1| outer membrane protein, OmpA/MotB family [Maribacter sp. HTCC2170]
Length = 393
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 57/172 (33%), Gaps = 10/172 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG----DMITCYI 76
+++ + L + E ++ I + +
Sbjct: 221 KEQQRVQDSLANELRIKEEATLAQRLAKEKEKARLAAIEKARIDAENQRKQQLENSIKEL 280
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + +L K +L L+A +L + PS + I SHTDS G N +S+ R +
Sbjct: 281 GLVYFGFNSSYLNKNSKSVLGLLANLLKEKPSVHLKITSHTDSRGASDYNKWLSERRVER 340
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
K+ + S + F + + + + N+R E ++
Sbjct: 341 TKN-YLMSIGISENRLVAEAFGEEQLTNECGDGVRCSAEKHRKNRRSEFEVT 391
>gi|59801906|ref|YP_208618.1| Omp3 [Neisseria gonorrhoeae FA 1090]
gi|194099400|ref|YP_002002501.1| Omp3 [Neisseria gonorrhoeae NCCP11945]
gi|239999644|ref|ZP_04719568.1| Omp3 [Neisseria gonorrhoeae 35/02]
gi|240014818|ref|ZP_04721731.1| Omp3 [Neisseria gonorrhoeae DGI18]
gi|240017267|ref|ZP_04723807.1| Omp3 [Neisseria gonorrhoeae FA6140]
gi|240081094|ref|ZP_04725637.1| Omp3 [Neisseria gonorrhoeae FA19]
gi|240113304|ref|ZP_04727794.1| Omp3 [Neisseria gonorrhoeae MS11]
gi|240116345|ref|ZP_04730407.1| Omp3 [Neisseria gonorrhoeae PID18]
gi|240118630|ref|ZP_04732692.1| Omp3 [Neisseria gonorrhoeae PID1]
gi|240121340|ref|ZP_04734302.1| Omp3 [Neisseria gonorrhoeae PID24-1]
gi|240124175|ref|ZP_04737131.1| Omp3 [Neisseria gonorrhoeae PID332]
gi|240126207|ref|ZP_04739093.1| Omp3 [Neisseria gonorrhoeae SK-92-679]
gi|240128845|ref|ZP_04741506.1| Omp3 [Neisseria gonorrhoeae SK-93-1035]
gi|254494359|ref|ZP_05107530.1| outer membrane protein P.III [Neisseria gonorrhoeae 1291]
gi|260439836|ref|ZP_05793652.1| Omp3 [Neisseria gonorrhoeae DGI2]
gi|268595455|ref|ZP_06129622.1| outer membrane protein PIII [Neisseria gonorrhoeae 35/02]
gi|268597207|ref|ZP_06131374.1| outer membrane protein PIII [Neisseria gonorrhoeae FA19]
gi|268599383|ref|ZP_06133550.1| outer membrane protein P.III [Neisseria gonorrhoeae MS11]
gi|268602011|ref|ZP_06136178.1| outer membrane protein P.III [Neisseria gonorrhoeae PID18]
gi|268604343|ref|ZP_06138510.1| outer membrane protein P.III [Neisseria gonorrhoeae PID1]
gi|268682799|ref|ZP_06149661.1| outer membrane protein P.III [Neisseria gonorrhoeae PID332]
gi|268684790|ref|ZP_06151652.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-92-679]
gi|268687227|ref|ZP_06154089.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-93-1035]
gi|291043111|ref|ZP_06568834.1| outer membrane protein PIII [Neisseria gonorrhoeae DGI2]
gi|293398450|ref|ZP_06642628.1| outer membrane protein P.III [Neisseria gonorrhoeae F62]
gi|129131|sp|P07050|OMP3_NEIGO RecName: Full=Outer membrane protein P.III; AltName:
Full=Gonococcal protein III; Short=PIII; Flags:
Precursor
gi|44890|emb|CAA28752.1| unnamed protein product [Neisseria gonorrhoeae]
gi|59718801|gb|AAW90206.1| outer membrane protein PIII [Neisseria gonorrhoeae FA 1090]
gi|193934690|gb|ACF30514.1| Omp3 [Neisseria gonorrhoeae NCCP11945]
gi|226513399|gb|EEH62744.1| outer membrane protein P.III [Neisseria gonorrhoeae 1291]
gi|268548844|gb|EEZ44262.1| outer membrane protein PIII [Neisseria gonorrhoeae 35/02]
gi|268550995|gb|EEZ46014.1| outer membrane protein PIII [Neisseria gonorrhoeae FA19]
gi|268583514|gb|EEZ48190.1| outer membrane protein P.III [Neisseria gonorrhoeae MS11]
gi|268586142|gb|EEZ50818.1| outer membrane protein P.III [Neisseria gonorrhoeae PID18]
gi|268588474|gb|EEZ53150.1| outer membrane protein P.III [Neisseria gonorrhoeae PID1]
gi|268623083|gb|EEZ55483.1| outer membrane protein P.III [Neisseria gonorrhoeae PID332]
gi|268625074|gb|EEZ57474.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-92-679]
gi|268627511|gb|EEZ59911.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-93-1035]
gi|291012717|gb|EFE04700.1| outer membrane protein PIII [Neisseria gonorrhoeae DGI2]
gi|291610921|gb|EFF40018.1| outer membrane protein P.III [Neisseria gonorrhoeae F62]
gi|317164900|gb|ADV08441.1| Omp3 [Neisseria gonorrhoeae TCDC-NG08107]
Length = 236
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 81/220 (36%), Gaps = 39/220 (17%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-----SSLDKAED-- 52
M K+L L ++F+ SG +A + + +IV +G + DKA
Sbjct: 1 MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNYGECWKNAYFDKASQGR 60
Query: 53 -------EFQMQLQDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATI 102
VV + + I + + L + L+++A
Sbjct: 61 VECGDAVAVPEPEPAPVAVVEQAPQYVDETISLSAKTLFGFDKDSLRAEAQDNLKVLAQR 120
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
L++ + ++ HTD +G+ K N +S+ RA V+ + L+ GV ++R IS G
Sbjct: 121 LSRTNVQSVRVEGHTDFMGSEKYNQALSERRAYVVANNLVSNGVPASR-ISAVGLGESQA 179
Query: 163 ---------IDTNDTKVGRQN-----------NQRIEIQI 182
+ K + ++R++++I
Sbjct: 180 QMTQVCQAEVAKLGAKASKAKKREALIACIEPDRRVDVKI 219
>gi|260769571|ref|ZP_05878504.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
gi|260614909|gb|EEX40095.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
Length = 316
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 4/140 (2%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP---MLQLIATI 102
+ E + I + I + +F + + L + +
Sbjct: 176 DSSQVEPMMNNSPIEYHIPKDMCAESIENMLSGQYAFHFGFDIHYEALEDVFVYSKVIDC 235
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
++K + + H D+ G+ + N +S RA I + L++ I + P
Sbjct: 236 ISKDSRIKVLLVGHADNQGSNQYNYALSLRRAVTISNILVEL-GVDPEQIVIEARGDSEP 294
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
I N R+ N+R+E+ +
Sbjct: 295 IANNAILEQRKKNRRVEMIL 314
>gi|296282332|ref|ZP_06860330.1| putative outer membrane lipoprotein [Citromicrobium bathyomarinum
JL354]
Length = 238
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
S +L +AT + ++AI HTD+ G+ K NL +SQ+
Sbjct: 115 VLAERTIRFEESSAEFIPGSEELLDELATAMRPCVGAIVAISGHTDTSGSPKVNLALSQD 174
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RA +++ LI+R + + GF P++ N+RIE ++
Sbjct: 175 RAQMVRRELIER-GIPGQNLIANGFGSSRPVEGLSPAD--PANRRIEFRVVS 223
>gi|325293279|ref|YP_004279143.1| outer membrane protein, OmpA family protein [Agrobacterium sp.
H13-3]
gi|325061132|gb|ADY64823.1| putative outer membrane protein, OmpA family protein [Agrobacterium
sp. H13-3]
Length = 771
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 7/133 (5%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIA 112
L + + + + L+ +A +NK P+
Sbjct: 633 SLDEVRYSARIRDKVRRIDLDTITFATGSADIPMAQARSLRKVADAINKALAKNPAETFL 692
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD++G+ ++NL++S ERA + + L ++ +G+ +Y
Sbjct: 693 IEGHTDAVGSDESNLVLSDERAASVANVLTDVYGIPPENLATQGYGERYLKVQTLGPE-- 750
Query: 173 QNNQRIEI-QIFP 184
Q N+R+ I ++ P
Sbjct: 751 QQNRRVTIRRVTP 763
>gi|303250252|ref|ZP_07336452.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307252017|ref|ZP_07533917.1| hypothetical protein appser6_5360 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302650868|gb|EFL81024.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306860486|gb|EFM92499.1| hypothetical protein appser6_5360 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 283
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L K ++ +A L + + + +TD +G+ K NL +SQ RA+++
Sbjct: 142 DFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRLGSEKYNLDLSQRRANMV 201
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-------KVGRQNNQRIEIQ 181
K+ L+Q+GV++N I+ G+ + D K + N+R+E+
Sbjct: 202 KARLVQQGVTAN--INAVGYGKAQQVKACDGIPHGQELKDCLRPNRRVEVT 250
>gi|126207944|ref|YP_001053169.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae L20]
gi|165975919|ref|YP_001651512.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|190149806|ref|YP_001968331.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|307245299|ref|ZP_07527387.1| hypothetical protein appser1_5040 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254248|ref|ZP_07536089.1| hypothetical protein appser9_4990 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258710|ref|ZP_07540442.1| hypothetical protein appser11_5080 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307260944|ref|ZP_07542627.1| hypothetical protein appser12_5120 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307263126|ref|ZP_07544747.1| hypothetical protein appser13_5480 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|126096736|gb|ABN73564.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|165876020|gb|ABY69068.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|189914937|gb|ACE61189.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|306853640|gb|EFM85857.1| hypothetical protein appser1_5040 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862795|gb|EFM94748.1| hypothetical protein appser9_4990 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867061|gb|EFM98917.1| hypothetical protein appser11_5080 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306869356|gb|EFN01150.1| hypothetical protein appser12_5120 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306871488|gb|EFN03211.1| hypothetical protein appser13_5480 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 283
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L K ++ +A L + + + +TD +G+ K NL +SQ RA+++
Sbjct: 142 DFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRLGSEKYNLDLSQRRANMV 201
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-------KVGRQNNQRIEIQ 181
K+ L+Q+GV++N I+ G+ + D K + N+R+E+
Sbjct: 202 KARLVQQGVTAN--INAVGYGKAQQVKACDGIPHGQELKDCLRPNRRVEVT 250
>gi|71738017|ref|YP_272433.1| OmpA domain-containing protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558570|gb|AAZ37781.1| OmpA domain protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 830
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA L P+ I I H D +G ++N+ +S++
Sbjct: 711 SDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSKQ 770
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA IK+YL+ + + G + P+ D + R N+R+EI++
Sbjct: 771 RAQTIKTYLVGK-GVPAELVDAVGEGSEKPLVNCDMQQPRAQLIQCLEPNRRVEIEV 826
>gi|53728845|ref|ZP_00134888.2| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 294
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L K ++ +A L + + + +TD +G+ K NL +SQ RA+++
Sbjct: 153 DFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRLGSEKYNLDLSQRRANMV 212
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-------KVGRQNNQRIEIQ 181
K+ L+Q+GV++N I+ G+ + D K + N+R+E+
Sbjct: 213 KARLVQQGVTAN--INAVGYGKAQQVKACDGIPHGQELKDCLRPNRRVEVT 261
>gi|187924986|ref|YP_001896628.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
gi|187716180|gb|ACD17404.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 215
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + V+ +TD IG+ K N +S RA +
Sbjct: 99 DALFDFDKAILKPAGKEKLDDLASKIGALNLEVVVATGYTDRIGSDKYNDRLSLRRAQAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIF 183
K+YL+ + + I G + P+ T + R ++R+E+++
Sbjct: 159 KAYLVSK-GIESNRIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVV 210
>gi|91784930|ref|YP_560136.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
LB400]
gi|91688884|gb|ABE32084.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 212
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/169 (11%), Positives = 49/169 (28%), Gaps = 22/169 (13%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+N + + + + R + +T V L +
Sbjct: 45 ANAKASKGDSVARMMQTLGAKLGNGEASGLMTLDRSTNRLTLR--DGVFERGSACLTPEA 102
Query: 93 LPMLQ----LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG--- 145
+ +A + P + ++ +TD++ + + + ++ +
Sbjct: 103 RAAIGAVQGELAHFIADNPKARMLVEGYTDNLPVTRPVIDYQRFCTVYDDNFTLSAARAR 162
Query: 146 -----------VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + I V G+ P+ D R N+R+E+Q
Sbjct: 163 EARRALLGTISDDAAKRIVVAGYGESRPLPGVDAADPR--NRRVEVQFL 209
>gi|56475929|ref|YP_157518.1| outer membrane protein [Aromatoleum aromaticum EbN1]
gi|56311972|emb|CAI06617.1| Bacterial outer membrane protein [Aromatoleum aromaticum EbN1]
Length = 238
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ + L +A VI HTD +G+ N +S+ RA+ +
Sbjct: 122 DTLFDFDKAVLKPEGRSKLDQLAEQAKSVKLEVILAVGHTDRLGSDVYNQKLSERRANAV 181
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQIF 183
K+YL+ + I G + P+ T K+GR Q ++R+E+++
Sbjct: 182 KTYLVGK-GVEANRIYTEGKGERQPVTGTTCSDKLGRKALIECLQPDRRVEVEVI 235
>gi|110637108|ref|YP_677315.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110279789|gb|ABG57975.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 841
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L ++ L + I + HTDS G + N +S+ RA +
Sbjct: 22 SVFFDSGKSILSEREKQRLDSLIYTFETELIYDIRLVGHTDSTGYPEKNKQLSKARAIAV 81
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+YL +R F S+ G P+ N T GR +N+R +I I
Sbjct: 82 YTYLSKRKNIH--FSSITGKGSLSPVQANTTDAGRAHNRRCDISIT 125
>gi|46398699|gb|AAS92035.1| IcmN protein [Legionella pneumophila]
Length = 166
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 61/168 (36%), Gaps = 9/168 (5%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S C + N+ + R + D + L GI V+ +G
Sbjct: 1 LSAC-------NRSGYIPENEVPKLPCRVDGACDATIIKMMTDLNKKGIKVASVGQNYLI 53
Query: 75 YIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
IP F + L +L IA L +F I + S++ ++K ++ R
Sbjct: 54 SIPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSVKRERALTLAR 113
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ V+ YL + +R I +G PI + R N R+EI
Sbjct: 114 SRVVSEYLWSQ-GVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEIT 160
>gi|237798269|ref|ZP_04586730.1| flagellar motor protein MotB [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331021121|gb|EGI01178.1| flagellar motor protein MotB [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 346
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 61/178 (34%), Gaps = 15/178 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ + +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPIEAETSETKAEAVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNL 127
I + L+ F +L +A + P+ ++I HTD+ N
Sbjct: 158 IMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN-KVSISGHTDATPFVGSGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S RA+ + L+ + V G+A + ++ N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDAQVARVVGYASSA-LYDHENPTN-PVNRRIDIVVLTK 272
>gi|268679796|ref|YP_003304227.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
gi|268617827|gb|ACZ12192.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
Length = 266
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 71/218 (32%), Gaps = 43/218 (19%)
Query: 6 GLSMFIMTTIS--GCGLASREKKKV---------------------------FLHKSNDT 36
LS+ + I+ + EK K +
Sbjct: 24 FLSLLLALFIALYALASVNTEKMKALKEEFVKIYDYSAKPEETTPVMNLNVKSGDAGKEK 83
Query: 37 DIVNKRFGSSLDKAE-----DEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLE- 89
+ G + E + ++ + + D +P + F +
Sbjct: 84 EKDKGNVGGMSAQLEEIARMAQMIEKMSLGEGSLDQKIDGAIFKLPTKMLFAPGSAEITN 143
Query: 90 KKFLPMLQLIATILNKFP-STVIAIQSHTDSIGT-----LKNNLLISQERADVIKSYLIQ 143
+ L+ I+ I+ P + + ++ TD+ ++NL +S RA+ + LI+
Sbjct: 144 SDSMLFLKRISDIITMLPQNVDVVVKGFTDTTPPPRGSKYQDNLELSSARANAVIRVLIR 203
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +S G+ I +NDT GR+ N R+E
Sbjct: 204 N-GIAKERLSSAGYGDTKAIASNDTDEGREKNSRVEFT 240
>gi|153003801|ref|YP_001378126.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152027374|gb|ABS25142.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 171
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 66/182 (36%), Gaps = 14/182 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++ L +++ ++ S ++++ + G + + +
Sbjct: 1 MRHLSVALAVLVLASASRVSAQTPWDAAKKAAGS-----ATVGKLEKQINKRLLEEGRKN 55
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
D + + ++ + L + + HTDS G
Sbjct: 56 QCSFKTDTDELEPGCDAKMKRLANALV--DAKKQLNG-----AGVQNFKFVVSGHTDSSG 108
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQRIEI 180
+ K+N +S +RA V++ L+ G+ + SV G K P+ +DT + N+R E+
Sbjct: 109 SAKHNDALSAKRAAVVERELVANGIPKDEIQSV-GMGSKRPLVKPDDTPAKKAKNRRYEL 167
Query: 181 QI 182
Q+
Sbjct: 168 QV 169
>gi|129136|sp|P09146|OMPA_ENTAE RecName: Full=Outer membrane protein A; Flags: Precursor
gi|40838|emb|CAA25062.1| unnamed protein product [Enterobacter aerogenes]
Length = 350
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + +TD IG+ + N +S++RA
Sbjct: 223 SDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRIGSEQYNQKLSEKRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YL+ + IS RG P+ N D R ++R+ I++
Sbjct: 283 QSVVDYLVAK-GIPANKISARGMGESDPVTGNTCDNVKARAALIDCLAPDRRVAIEV 338
>gi|71907931|ref|YP_285518.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71847552|gb|AAZ47048.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 225
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L L + + L + I I TD+ G L N ++ RA ++ +
Sbjct: 118 FGLGSAMLSPAARSSLNEVMSALLS--ARQITIIGRTDNTGPLAFNESLALARALAVRDH 175
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L+ +SV+ I NDT GR N+R+E+
Sbjct: 176 LLSTHPMLTPTLSVKARGTCCFIAANDTLAGRTQNRRVELV 216
>gi|330951464|gb|EGH51724.1| flagellar motor protein MotB [Pseudomonas syringae Cit 7]
Length = 351
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 64/183 (34%), Gaps = 15/183 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ ++ +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPLEAETAETKAEEVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNL 127
I + L+ F +L +A + P+ I+I HTD+ N
Sbjct: 158 IMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN-KISISGHTDATPFVGSGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S RA+ + L+ ++ V G+A + + N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDHQNPTN-PVNRRIDIVVLTKKA 274
Query: 188 IKK 190
++
Sbjct: 275 QQR 277
>gi|13472165|ref|NP_103732.1| hypothetical protein mll2368 [Mesorhizobium loti MAFF303099]
gi|14022910|dbj|BAB49518.1| mll2368 [Mesorhizobium loti MAFF303099]
Length = 167
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 12/152 (7%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ T + G + E+E + + + TG + G + + L++
Sbjct: 23 AGQTGNLGAARGICVGT-EEECKSKAEKTGSAAQKTGLDMMIN-----FALDSAQLDQTA 76
Query: 93 LPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
L A L + ++ HTD+ G + N +SQ RA + + ++ +
Sbjct: 77 RAELDEFAKALKDNRLSTFSFVVEGHTDATGPDRYNQDLSQRRAQSVAA-FLEANGVESV 135
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G +P N N+R+E++I
Sbjct: 136 RLEAIGLGKSHPRVANPYD---PVNRRVEMRI 164
>gi|261378312|ref|ZP_05982885.1| OmpA family protein [Neisseria cinerea ATCC 14685]
gi|269145408|gb|EEZ71826.1| OmpA family protein [Neisseria cinerea ATCC 14685]
Length = 257
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 78/215 (36%), Gaps = 34/215 (15%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKK-VFLHKSNDTDIVNKRFGS-----SLDKAED- 52
M K+L L ++F+ SG +AS K + S +IV +G +KAE
Sbjct: 1 MTKQLKLSALFVALLASGTAMASEAHTKHGYTVSSKSQEIVRNNYGECWKNTYFNKAEQG 60
Query: 53 --EFQMQLQDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
E V+ + + + + + L + L ++A L +
Sbjct: 61 RVECGDAAPQAPTVIEQAPQYVDETVSLSAKTLFGFDKDVLRVEAQENLNVLAQRLGQTN 120
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ ++ HTD +G K N +S+ RA+V+ +YL+ R IS G T
Sbjct: 121 VQAVRVEGHTDFMGAEKYNQELSERRANVVANYLVGR-GVPAAKISAAGLGESQAQMTQA 179
Query: 168 TKVGRQN--------------------NQRIEIQI 182
+ ++R++I+I
Sbjct: 180 CEAEVAKLGAKVSKAKKREALIACIEPDRRVDIKI 214
>gi|188584474|ref|YP_001927919.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
gi|179347972|gb|ACB83384.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
Length = 718
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 50/132 (37%), Gaps = 7/132 (5%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT----ILNKFPSTVIAI 113
L M + I + L IA + P V I
Sbjct: 574 LDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKRLSTIAEAINRTIKDNPQEVFLI 633
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ +TD++G+ +NL +S RA + + L Q ++ +G+ +Y +T+ +
Sbjct: 634 EGYTDAVGSDIDNLSLSDRRAQSVAAVLTQNFQVPPENLTTQGYGEQYLKV--NTQEANR 691
Query: 174 NNQRIEI-QIFP 184
N+R+ + +I P
Sbjct: 692 ENRRVTVRRITP 703
>gi|294670501|ref|ZP_06735381.1| hypothetical protein NEIELOOT_02220 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307780|gb|EFE49023.1| hypothetical protein NEIELOOT_02220 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 271
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 62/172 (36%), Gaps = 13/172 (7%)
Query: 1 MIKELGLSMFIMTTISGC---GLASREKKKVFLHKSNDTDIVNKRFGS-----SLDKAED 52
M K+L L I+ I+ + K ++ +IV + DK
Sbjct: 1 MTKQLKLGALIVAAIASANTLAASEPHTKHGYVVSRESQEIVRNNYEECWKTTYFDKETQ 60
Query: 53 ---EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + + + ++ +F + L + + L +A L+
Sbjct: 61 GRVECGDAVAQAPAAPEYVDETVSLSAKTLFNF-DKDNLRPQAIETLNSLAARLSDANVQ 119
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ ++ HTD +G+ + N +S+ RA+ + +YL+ + IS G
Sbjct: 120 AVRVEGHTDFMGSEQYNQALSERRANAVANYLVNQ-GVPAGKISAVGLGESQ 170
>gi|257456384|ref|ZP_05621580.1| OmpA family protein [Treponema vincentii ATCC 35580]
gi|257446044|gb|EEV21091.1| OmpA family protein [Treponema vincentii ATCC 35580]
Length = 175
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 57/170 (33%), Gaps = 8/170 (4%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM 71
+ GC ++ K+ V + + AE++ + R +
Sbjct: 13 AAIVMGCASQPKQPKEE--------KPVVQTQQAETAPAEEKTAEPEKAPEQQPQRNTNN 64
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
++ L IA L T I I H + + K+ +S
Sbjct: 65 NAGTETTVYFAPKTYTIDTFTAHKLDGIAEQLKAKDVTQIKIVGHCAKMDSTKDEEKLSL 124
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+RA + Y G + ++V ++P ++ R++N+R+EI
Sbjct: 125 QRALAVARYFESTGAFTADNMTVAAEGAQHPAGSHAEISERKHNRRVEIY 174
>gi|121997035|ref|YP_001001822.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1]
gi|121588440|gb|ABM61020.1| OmpA/MotB domain protein [Halorhodospira halophila SL1]
Length = 346
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 67/160 (41%), Gaps = 18/160 (11%)
Query: 45 SSLDKAEDEFQMQLQDT--------GIVVSRIGDMITCYIPVH----VSFVSEVFLEKKF 92
+ + ++FQ + D I++ D + + H + + +
Sbjct: 104 EEMQELAEQFQDAVLDDPDLAEYADQILLEITDDGLRIQLVDHDGRPMFELGSADPREHT 163
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGT---LKNNLLISQERADVIKSYLIQRGVSSN 149
+L+ +A +L P+ +++ HTD+ +N +S +RA+ + L+ G+ +
Sbjct: 164 EEILRALARVLEDVPN-PVSLSGHTDARPFARDDYDNWSLSTDRANAARLTLLDGGLPAE 222
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
R V G+A P D +D + N+RI + + R ++
Sbjct: 223 RIGQVVGYADTVPFDPDDPRAD--INRRISVVLLSREAVQ 260
>gi|312270717|gb|ADQ55759.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 16/119 (13%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILN----KFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + L+ L T + + P+ + + +TD IG NL +SQ+
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLENPA--VQVNGYTDRIGKDAANLTLSQK 299
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
RA+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 300 RAETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|289678953|ref|ZP_06499843.1| flagellar motor protein MotD [Pseudomonas syringae pv. syringae
FF5]
Length = 234
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 7/153 (4%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
K + + + D F ++ + V I + + F
Sbjct: 84 KDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSMLFGSG 143
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSY 140
+ K +++ +A I+ +F I ++ TD N +S R+ I
Sbjct: 144 DAMPSDKAFTIIEKVAGIVKRF-DNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVRM 202
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
L GV+ R SV G+ PI N + GR
Sbjct: 203 LAMDGVNPARLASV-GYGEFQPIVPNTSTAGRA 234
>gi|261493427|ref|ZP_05989952.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
haemolytica serotype A2 str. BOVINE]
gi|261310921|gb|EEY12099.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
haemolytica serotype A2 str. BOVINE]
Length = 153
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 4/110 (3%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + +E ++ +L A +L K + I H D GT + N+
Sbjct: 43 TAEQLKAQYNTVYFGFDSYAVEGEYRQLLDAHAQLLAKTQG-NVTIAGHADERGTPEYNI 101
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ Q RAD +K YL +G ++ S + + P ++ N+R
Sbjct: 102 ALGQRRADAVKGYLAAKGANNT---STVSYGEEKPAVLGHSEADYAKNRR 148
>gi|261496884|ref|ZP_05993252.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
haemolytica serotype A2 str. OVINE]
gi|261307408|gb|EEY08743.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
haemolytica serotype A2 str. OVINE]
Length = 157
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 4/110 (3%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + +E ++ +L A +L K + I H D GT + N+
Sbjct: 47 TAEQLKAQYNTVYFGFDSYAVEGEYRQLLDAHAQLLAKTQG-NVTIAGHADERGTPEYNI 105
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ Q RAD +K YL +G ++ S + + P ++ N+R
Sbjct: 106 ALGQRRADAVKGYLAAKGANNT---STVSYGEEKPAVLGHSEADYAKNRR 152
>gi|258624664|ref|ZP_05719599.1| lateral flagellar MotY-like protein [Vibrio mimicus VM603]
gi|258583056|gb|EEW07870.1| lateral flagellar MotY-like protein [Vibrio mimicus VM603]
Length = 366
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
V + L + L+ + + + + + +TD++G NL IS++RA++
Sbjct: 238 VIYFAFGQRTLSNEQKMRLRALYRYIVEDSRVNTVLVDGYTDNVGPSVANLTISRQRAEL 297
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
I + R + + VR +YP+ +NDT G+ N+R+ +++ R N +
Sbjct: 298 IAKE-LNRLGLAEEKVEVRAHGLRYPVASNDTAAGQAKNRRVTLRLV-RDNEQ 348
>gi|296159971|ref|ZP_06842791.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295889717|gb|EFG69515.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 215
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + V+ +TD IG+ K N +S RA +
Sbjct: 99 DALFDFDKAILKPGGKEKLDDLASKIGALNLEVVVATGYTDRIGSDKYNDRLSLRRAQAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIF 183
K+YL+ + + I G + P+ T + R ++R+E+++
Sbjct: 159 KAYLVSK-GIESNRIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVV 210
>gi|226323415|ref|ZP_03798933.1| hypothetical protein COPCOM_01189 [Coprococcus comes ATCC 27758]
gi|225208099|gb|EEG90453.1| hypothetical protein COPCOM_01189 [Coprococcus comes ATCC 27758]
Length = 539
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 9/165 (5%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-S 84
+ S D + + + + + T + +V F
Sbjct: 369 ETDADVSSMSEDELGELKENQTAVSSGLMGAFKEQGLDSTKIDESTGTVQMDNNVLFAWD 428
Query: 85 EVFLEKKFLPMLQL--------IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L ++ L I++ + + I ++ +TDS G NL +SQERA
Sbjct: 429 KADLSEEGKAYLDQFLAAYVPVISSAIEDGKVSTIVVEGYTDSAGDEAYNLKLSQERAKT 488
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ Y+ I V G I + K ++R+E++
Sbjct: 489 VADYIKAGYPELTNAIEVVGNGANNLILDGEGKEDAAASRRVEVR 533
>gi|332664693|ref|YP_004447481.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332333507|gb|AEE50608.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 662
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 57/137 (41%), Gaps = 10/137 (7%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
++ + ++ + + + ++ + L+ + ++ K+P+ + +
Sbjct: 514 MRLAPINEEVMRKPLAEGTVIVMENIYYDFNKAAIRTTDARDLEALTRLMLKYPTMEVEL 573
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG-- 171
+HTDS GT + N +S RA+ K +L+++ + I GF N K G
Sbjct: 574 GAHTDSRGTTEYNQQLSVRRAEAAKEFLVRK-GVAANRIRTTGFGETQ--IRNHCKEGIE 630
Query: 172 -----RQNNQRIEIQIF 183
Q N+R E+++
Sbjct: 631 CAEKEHQFNRRTEVKVL 647
>gi|228018087|gb|ACP52722.1| fibronectin-binding protein [Campylobacter coli]
Length = 224
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 58/147 (39%), Gaps = 8/147 (5%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
E+ K + K S E+ G ++ G T Y+ H F
Sbjct: 86 EQTKEVVSKPQVVTPAPAPVVSQSKCPEE------PREGALLDENGCEKTIYLEGHFDF- 138
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+V + F ++ IA IL++ ++ HTD+IG+ N +S+ RA+ + ++
Sbjct: 139 DKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAKE-LE 197
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ I G+ P +NDTK
Sbjct: 198 KFGVDKSRIQTVGYGQDKPRSSNDTKE 224
>gi|144899852|emb|CAM76716.1| Flagellar motor protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 323
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 73/187 (39%), Gaps = 19/187 (10%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDM 71
+ + + + + + + +R DKA++ L+ ++V +
Sbjct: 112 TSENTEPMEGMSEEDFREKMAEREQQKFDKAKEVLDNALKGIPELKQFEGSMMVDNTPEG 171
Query: 72 ITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN-- 125
+ I + + +L L++ I+N+ P+ I+I HTD+I
Sbjct: 172 LRIQITDQEGLAMFPSGSSAMFGHTRALLDLVSRIVNQMPN-KISITGHTDAIPFRDPSG 230
Query: 126 --NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA + L+ GV R + G A P+ +D K R N+RI I +
Sbjct: 231 YTNWELSADRALASRRALLGSGVPEERIDRIVGRASSEPLVVDDPKAPR--NRRISIILL 288
Query: 184 PRGNIKK 190
++ +
Sbjct: 289 RENDLTE 295
>gi|86147194|ref|ZP_01065510.1| outer membrane protein [Vibrio sp. MED222]
gi|85835078|gb|EAQ53220.1| outer membrane protein [Vibrio sp. MED222]
Length = 213
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G + + + L +K +L + L + + + +TDS G+ NL
Sbjct: 101 EGKLAREVLARVTFDFDDDELNQKSRYLLLNLIAKL-EHQTPEFIVTGNTDSKGSDSYNL 159
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ +R++V+ ++ + ++V P+ +N+T+ GR NN+R++I
Sbjct: 160 SLGLQRSNVVV-GYLKEQGVNIEDLTVSSQGEANPVQSNETESGRHNNRRVDI 211
>gi|320321894|gb|EFW77990.1| flagellar motor protein MotB [Pseudomonas syringae pv. glycinea
str. B076]
gi|320331001|gb|EFW86975.1| flagellar motor protein MotB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330872240|gb|EGH06389.1| flagellar motor protein MotB [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 341
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 15/183 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ ++ +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPLEAETSETKAEEVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NL 127
I + L+ F +L +A + P+ I+I HTD+ + N N
Sbjct: 158 IMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN-KISISGHTDATPFVGNGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+S RA+ + L+ ++ V G+A + + N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDYENPTN-PVNRRIDIVVLTKKA 274
Query: 188 IKK 190
++
Sbjct: 275 QQR 277
>gi|254507991|ref|ZP_05120119.1| outer membrane protein [Vibrio parahaemolyticus 16]
gi|219549099|gb|EED26096.1| outer membrane protein [Vibrio parahaemolyticus 16]
Length = 278
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + K++ L A +L + PS + + H DS+G + N ++ ERA +
Sbjct: 157 DNQFAFNSSEVNPKYMGHLAKAANMLAEHPSLNLKVTGHADSVGDVAYNEKLALERAQQV 216
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K + + I+ P+ +++ + N+R+ I++
Sbjct: 217 KR-YLSIFGLAPTRIATHSVGDTLPLHEGNSEGVKLTNRRVSIEVI 261
>gi|209968914|gb|ACJ02818.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 16/119 (13%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILN----KFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + L+ L T + + P+ + + +TD IG NL +SQ+
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLENPA--VQVNGYTDRIGKDAANLTLSQK 299
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
RA+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 300 RAETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|126736760|ref|ZP_01752498.1| OmpA/MotB [Roseobacter sp. CCS2]
gi|126713731|gb|EBA10604.1| OmpA/MotB [Roseobacter sp. CCS2]
Length = 592
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L+ K + ++ I++I+ ++ + + TDS+GT+ NN+ +++ RA +K
Sbjct: 483 FLTGQAVLDTKAIADIKRISSIVRSAEYEGYEVLVFGFTDSVGTINNNIALAERRAQTVK 542
Query: 139 SYLIQRG--VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
LI + + +S+ G P++ NDT VGR N+R+E+ I PR
Sbjct: 543 DVLIAENAGILDDETVSIFGMGPIAPVNCNDTSVGRDLNRRVEVWIRPRA 592
>gi|167033774|ref|YP_001669005.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166860262|gb|ABY98669.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 831
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA+ L P+ + I H D +G + NL +S++
Sbjct: 712 SDTLFAFGRADFQSLKNEGQNQLSAIASKLLNTPNIGKVVISGHADQLGDSQGNLQVSKQ 771
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA I + + +G + P+ D + R N+R+EI++
Sbjct: 772 RAQTI-RTYLVGKGVPAELVVAQGEGSRKPLVNCDMQQPRAQLIKCLEPNRRVEIEV 827
>gi|209968924|gb|ACJ02823.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 359
>gi|299773243|gb|ADJ38696.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|228018109|gb|ACP52733.1| fibronectin-binding protein [Campylobacter coli]
gi|228018111|gb|ACP52734.1| fibronectin-binding protein [Campylobacter coli]
gi|228018113|gb|ACP52735.1| fibronectin-binding protein [Campylobacter coli]
Length = 223
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 8/163 (4%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
++ I E+ K ++K S E+ G ++
Sbjct: 69 TLGISFGFGAKQEKVVEQTKEVVNKPQVVTPAPAPVVSQSKCPEE------PREGALLDE 122
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G T Y+ H F +V + F ++ IA IL++ ++ HTD+IG+ N
Sbjct: 123 NGCEKTIYLEGHFDF-DKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQ 181
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+S+ RA+ + +++ I G+ P +NDTK
Sbjct: 182 KLSERRANSVAKE-LEKFGVDKSRIQTVGYGQDKPRSSNDTKE 223
>gi|83591777|ref|YP_425529.1| OmpA family protein [Rhodospirillum rubrum ATCC 11170]
gi|83574691|gb|ABC21242.1| OmpA family protein [Rhodospirillum rubrum ATCC 11170]
Length = 340
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + ++ AT S+ I + H D G NL +S+ RA+ +
Sbjct: 237 VFFDFDSTSITPEAGGIINTAATNAKSTGSSTIEVTGHADRSGGDAYNLALSKRRAEAVV 296
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++R S I+V P+ V N+R+ + +
Sbjct: 297 GE-LERNGISRSQIAVYAKGEADPLVPTPDGVREPQNRRVVVVL 339
>gi|284042425|ref|YP_003392765.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
gi|283946646|gb|ADB49390.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
Length = 716
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 4/112 (3%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
V + L + + IA L + HTDS G + N +
Sbjct: 606 RTIVIPSDGQFRVGDDTLLAQGRRYARAIAPQLKGVK--RVTCTGHTDSDGGVVANRALG 663
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + + L + GV + + R P TNDT GR+ N+R+E+ +
Sbjct: 664 LARAKAVCAELRRLGVKAP--LRTRSAGESRPRATNDTAQGRRLNRRVELTL 713
>gi|322515359|ref|ZP_08068353.1| outer membrane protein A [Actinobacillus ureae ATCC 25976]
gi|322118586|gb|EFX90814.1| outer membrane protein A [Actinobacillus ureae ATCC 25976]
Length = 156
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 63/184 (34%), Gaps = 33/184 (17%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
MIK ++ ++GC AS + + V + + +
Sbjct: 1 MIKNVAKISAVTAAKLLLAGCFSASSLNRDAQAPVAPQVAPVVEETVTPAKEYT------ 54
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + L K L IA + + +AI +T
Sbjct: 55 -----------------LSGDFLFDFDKSNLTAKGKATLNNIAQEIKASGAKKVAITGYT 97
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D +G+ N +SQERA+ K+YL+ +GV + + G + K + N+R
Sbjct: 98 DRLGSPAYNQKLSQERANSAKAYLVNQGVKAQ--MKAVGRGEANQV-----KSCLKPNRR 150
Query: 178 IEIQ 181
+ I+
Sbjct: 151 VHIK 154
>gi|238789280|ref|ZP_04633067.1| Outer membrane protein A [Yersinia frederiksenii ATCC 33641]
gi|238722612|gb|EEQ14265.1| Outer membrane protein A [Yersinia frederiksenii ATCC 33641]
Length = 357
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + D IG NL +SQ RA
Sbjct: 230 SDVLFAFNKSTLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQRRA 289
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
D ++ YL+ + I+ RG P+ N ++R+EI++
Sbjct: 290 DSVRDYLVSK-GIPAEKITARGEGQANPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 345
>gi|209968910|gb|ACJ02816.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968944|gb|ACJ02833.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714273|gb|ACN62131.1| outer membrane protein A [Haemophilus parasuis]
gi|224714279|gb|ACN62134.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|330892287|gb|EGH24948.1| OmpA domain-containing protein [Pseudomonas syringae pv. mori str.
301020]
Length = 830
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA L P+ I I H D +G ++N+ +S++
Sbjct: 711 SDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSRQ 770
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA IK+YL+ + + G + P+ D + R N+R+EI++
Sbjct: 771 RAQTIKTYLVGK-GVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLEPNRRVEIEV 826
>gi|298484732|ref|ZP_07002834.1| OmpA domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298160765|gb|EFI01784.1| OmpA domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 830
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA L P+ I I H D +G ++N+ +S++
Sbjct: 711 SDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSRQ 770
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA IK+YL+ + + G + P+ D + R N+R+EI++
Sbjct: 771 RAQTIKTYLVGK-GVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLEPNRRVEIEV 826
>gi|288225947|gb|ADC44458.1| OmpA [Candidatus Erwinia dacicola]
Length = 324
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + +TD I + + N +S++RA
Sbjct: 197 SDVLFNFNKNTLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRIDSEQYNQKLSEKRA 256
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +L+ + I RG PI T D+ GR ++R+EI++
Sbjct: 257 QSVVDHLVSK-GIPASKIYARGKGKSNPIIGSTCDSVKGRNALIDCLAPDRRVEIEV 312
>gi|129142|sp|P24755|OMPA_SEROD RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|152839|gb|AAA26561.1| outer membrane protein II [Serratia odorifera]
Length = 243
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 14/123 (11%)
Query: 73 TCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLI 129
+ V F S + L+ + L + T L+ + + +TD +G N +
Sbjct: 119 LFTLKSDVLFNSAKSSLKPEGQQALDQLYTQLSSMDPKDGSVVVLGYTDPVGKDAANQKL 178
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI----------DTNDTKVGRQNNQRIE 179
S+ RA + YL+ + IS RG + T N+R+E
Sbjct: 179 SEARARSVVDYLVSK-GIPADKISARGMGEADQVTDSCGYKNGRATKAQIECLAPNRRVE 237
Query: 180 IQI 182
I++
Sbjct: 238 IEV 240
>gi|126736504|ref|ZP_01752245.1| OmpA/MotB [Roseobacter sp. CCS2]
gi|126714042|gb|EBA10912.1| OmpA/MotB [Roseobacter sp. CCS2]
Length = 526
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L+ + + +A +L+ + + TDS+G + N +S+ RA +
Sbjct: 414 FETGSSNLDARAQDDIVRLARLLSSDAYRNKEAVFVGFTDSVGDPELNRQLSERRAGQVV 473
Query: 139 SYLIQRGVSSNRFIS--VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ ++ G+ P+ N+T GR+ N+R+E+ +
Sbjct: 474 QELLDENPDLQSNVALQTIGYGEISPLGCNETNTGRRINRRVEVWV 519
>gi|3282021|emb|CAA07454.1| outer membrane protein [Haemophilus sp.]
Length = 360
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ + L I + + S +A+ +TD IG+ N+ +SQ+RA+
Sbjct: 243 SDVNFAFGKANLKPQAQAALDGIYGEIAQVNSAKVAVAGYTDRIGSDAFNVKLSQQRAET 302
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ +Y + + S IS G+ P+ T D GR ++R EI +
Sbjct: 303 VANYFVAK-GVSADAISATGYGKANPVTGATCDQVKGRKALIACLAPDRREEIAV 356
>gi|118591825|ref|ZP_01549220.1| possible OmpA family member [Stappia aggregata IAM 12614]
gi|118435468|gb|EAV42114.1| possible OmpA family member [Stappia aggregata IAM 12614]
Length = 628
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIAT----ILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + + +P L+ IA ++ + P+TV+ I+ HTD++G+ +NL
Sbjct: 508 RVDLDTITFDTGSAVVRQSQVPQLEDIARASQAVIEQDPTTVLLIEGHTDAVGSDVSNLA 567
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ-IFP 184
+S RA+ + L + + V+G+ Y R N+R+ I+ I P
Sbjct: 568 LSDRRAETVARILADVYGVAPENMVVQGYGEDYLKVDTQGAEER--NRRVTIRNITP 622
>gi|299773241|gb|ADJ38695.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773245|gb|ADJ38697.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 359
>gi|77465494|ref|YP_354997.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides 2.4.1]
gi|77389912|gb|ABA81096.1| OmpA/MotB domain protein [Rhodobacter sphaeroides 2.4.1]
Length = 254
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 59/162 (36%), Gaps = 4/162 (2%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
AS + + ++ D E + + + + + + +H
Sbjct: 94 TASTDSAPGETGRPVLGLPQGADRLAAADP-PPEGRETAEVSPESFGLLDPALQVNVRIH 152
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+F L P+L + T++ + I HTD+ G+ N +S RA+ ++
Sbjct: 153 FAF-DSAVLAADQTPLLAQLCTVMKASDIRLFQIVGHTDAAGSEAYNQQLSLLRAEEVRR 211
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
YL + + G ++ D D + G N+R+E Q
Sbjct: 212 YLTGPCGIAPERLRAVGMGERFLADKKDPRSG--ENRRVEFQ 251
>gi|312270711|gb|ADQ55756.1| OmpA [Haemophilus parasuis]
gi|312270713|gb|ADQ55757.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|228018085|gb|ACP52721.1| fibronectin-binding protein [Campylobacter coli]
Length = 224
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
E+ K ++K S +E+ G ++ G T Y+ H F
Sbjct: 86 EQTKEVVNKPQVVTPAPAPVVSQSKCSEE------PREGALLDENGCEKTIYLEGHFDF- 138
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+V + F ++ IA IL++ ++ HTD+IG+ N +S+ RA+ + ++
Sbjct: 139 DKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAKE-LE 197
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ I G+ P +NDTK
Sbjct: 198 KFGVDKSRIQTVGYGQDKPRSSNDTKE 224
>gi|289672567|ref|ZP_06493457.1| flagellar motor protein MotB [Pseudomonas syringae pv. syringae
FF5]
Length = 240
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 61/178 (34%), Gaps = 15/178 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ + +R L + +++ Q Q I+ D +
Sbjct: 44 SPDTVPIEAENAETKAEAVEQERLEMLLQELQNKVQENPQLQKFKDQILFEITQDGLRIQ 103
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNL 127
I + L+ F +L +A + P+ ++I HTD+ N
Sbjct: 104 IMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN-KVSISGHTDATPFVGSGGFGNW 162
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S RA+ + L+ ++ V G+A + + N+RI+I + +
Sbjct: 163 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDHQNPTN-PINRRIDIVVLTK 218
>gi|332666720|ref|YP_004449508.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332335534|gb|AEE52635.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 508
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 55/143 (38%), Gaps = 4/143 (2%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
++ ++ LQ+ I + ++P+ S ++ L + +L P
Sbjct: 360 ERVKELIDQALQNYQIA-DNRSNAAEWFLPMLHFPSSTAVIKYSDYGNLAGVGRMLKANP 418
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
S + + TDS G+ N +S +RA + +L+ + ++ +
Sbjct: 419 SIRLVVTGFTDSTGSESINNQLSYDRAKNVIEHLMNNHGIARGRFVLQWKGSADNLVPTS 478
Query: 168 TKVGRQNNQRIEIQIFPRGNIKK 190
+ N+R E +I G++++
Sbjct: 479 SSY---MNRRAEFRIAGPGDVEQ 498
>gi|257483657|ref|ZP_05637698.1| OmpA domain-containing protein [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|331012188|gb|EGH92244.1| OmpA domain-containing protein [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 830
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA L P+ I I H D +G ++N+ +S++
Sbjct: 711 SDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSKQ 770
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA IK+YL+ + + G + P+ D + R N+R+EI++
Sbjct: 771 RAQTIKTYLVGK-GVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLEPNRRVEIEV 826
>gi|237802142|ref|ZP_04590603.1| OmpA domain-containing protein [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024999|gb|EGI05055.1| OmpA domain-containing protein [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 830
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA L P+ I I H D +G ++N+ +S++
Sbjct: 711 SDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSKQ 770
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA IK+YL+ + + G + P+ D + R N+R+EI++
Sbjct: 771 RAQTIKTYLVGK-GVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLEPNRRVEIEV 826
>gi|330980557|gb|EGH78660.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 830
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA L P+ I I H D +G ++N+ +S++
Sbjct: 711 SDTLFAFGRADFQSLKTEGQNQLSAIAGKLLNTPNIGKIVIAGHADQLGDPQSNMQVSKQ 770
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA IK+YL+ + + G + P+ D + R N+R+EI++
Sbjct: 771 RAQTIKTYLVGK-GVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLEPNRRVEIEV 826
>gi|330940416|gb|EGH43516.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 830
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA L P+ I I H D +G ++N+ +S++
Sbjct: 711 SDTLFAFGRADFQSLKTEGQNQLSAIAGKLLNTPNIGKIVIAGHADQLGDPQSNMQVSKQ 770
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA IK+YL+ + + G + P+ D + R N+R+EI++
Sbjct: 771 RAQTIKTYLVGK-GVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLEPNRRVEIEV 826
>gi|330901436|gb|EGH32855.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 830
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA L P+ I I H D +G ++N+ +S++
Sbjct: 711 SDTLFAFGRADFQSLKTEGQNQLSAIAGKLLNTPNIGKIVIAGHADQLGDPQSNMQVSKQ 770
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA IK+YL+ + + G + P+ D + R N+R+EI++
Sbjct: 771 RAQTIKTYLVGK-GVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLEPNRRVEIEV 826
>gi|312270729|gb|ADQ55765.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|209968918|gb|ACJ02820.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968922|gb|ACJ02822.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714277|gb|ACN62133.1| outer membrane protein A [Haemophilus parasuis]
gi|224714281|gb|ACN62135.1| outer membrane protein A [Haemophilus parasuis]
Length = 367
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 359
>gi|330501121|ref|YP_004377990.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328915407|gb|AEB56238.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 313
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 68/180 (37%), Gaps = 18/180 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE-DEFQMQLQ-----DTGIVVSRIGDMI 72
+E L + + F L E + +L + I V + +
Sbjct: 104 ARTPQEDPGAALGEGLPGEPRRPHFAEPLQMQELAKLMKELALQLDAEANIEVQVVPQGL 163
Query: 73 TCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----- 123
I + L F +L+ +A IL + + +I I HTDS+
Sbjct: 164 RILIKDDAQRFMFNRGSSHLNPHFETLLRRLAGILGRVENHLI-ISGHTDSMPYRGVVGG 222
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
NN +S +RA ++ L++ G+ + + V A P+ ND + G N+RIE+ +
Sbjct: 223 YNNWNLSGDRALRARNVLVEAGLPTGNVLQVAAQADGMPLLPNDPENG--ANRRIELLLL 280
>gi|254429094|ref|ZP_05042801.1| OmpA family protein [Alcanivorax sp. DG881]
gi|196195263|gb|EDX90222.1| OmpA family protein [Alcanivorax sp. DG881]
Length = 203
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 16/184 (8%)
Query: 1 MIKELGLSMFI-MTTISGCGLASR---EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M L + MTT++GC + ++ ++ T
Sbjct: 1 MKARFALLILAGMTTMAGCASTESLYAQYDELCPVEARVTSTGLVTVTGIAAGGGAGLVA 60
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
T + P + L L+ +L ++P+ +++Q+
Sbjct: 61 GESRTQVW-----------EPAVYFGFDQNELADAEARRLESNLAVLKQYPTLQVSVQAF 109
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD G N ++ R D + YL G+S+ R V + PI + R N+
Sbjct: 110 TDEKGAASYNQKLAARRLDRVVQYLRDGGISNGRIKRVA-LGEELPILPDANNEQRVINR 168
Query: 177 RIEI 180
R+E+
Sbjct: 169 RVEL 172
>gi|114047773|ref|YP_738323.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113889215|gb|ABI43266.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 264
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 52/170 (30%), Gaps = 4/170 (2%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
K + + + + Q + + +
Sbjct: 86 SDTDTVKTQQQHIALQRQQLASLSSKQQASEQRAAEYASTQKQLDELLAEQQQLLSELAL 145
Query: 78 --VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
LE FLP L + ++ + + + ++ + D G L N +S++R
Sbjct: 146 GMNVQFRTGSSELESHFLPQLDNVVKVMKRSSESNLELKGYADRRGDLAYNQALSEQRLL 205
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + + + I+ + F + P++ ++R+ + + P
Sbjct: 206 EV-RGYLIKQGVAPERITTQAFGARMPLNDQQDSESDVFDRRVTLTMQPN 254
>gi|312270721|gb|ADQ55761.1| OmpA [Haemophilus parasuis]
gi|312270723|gb|ADQ55762.1| OmpA [Haemophilus parasuis]
Length = 366
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + + + + +TD IG NL +SQ+RA
Sbjct: 243 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 302
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 303 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 358
>gi|302062274|ref|ZP_07253815.1| flagellar motor protein MotB [Pseudomonas syringae pv. tomato K40]
Length = 341
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 63/178 (35%), Gaps = 15/178 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ + +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPIEAETSETKAEAVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NL 127
I + L+ F +L +A + P+ I+I HTD+ + N N
Sbjct: 158 IMDADNRPMFDSGSARLKPYFEDILLALADTIRSVPN-KISISGHTDATPFVGNNGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S RA+ + L+ ++ V G+A + + N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDRENPTN-PVNRRIDIVVLTK 272
>gi|228018089|gb|ACP52723.1| fibronectin-binding protein [Campylobacter coli]
gi|228018119|gb|ACP52738.1| fibronectin-binding protein [Campylobacter coli]
gi|228018121|gb|ACP52739.1| fibronectin-binding protein [Campylobacter coli]
gi|228018123|gb|ACP52740.1| fibronectin-binding protein [Campylobacter coli]
gi|228018137|gb|ACP52747.1| fibronectin-binding protein [Campylobacter coli]
Length = 224
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
E+ K ++K S E+ G ++ G T Y+ H F
Sbjct: 86 EQTKEVVNKPQVVTPAPAPVVSQSKCPEE------PREGALLDENGCEKTIYLEGHFDF- 138
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+V + F ++ IA IL++ ++ HTD+IG+ N +S+ RA+ + ++
Sbjct: 139 DKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAKK-LE 197
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ I G+ P +NDTK
Sbjct: 198 KFGVDKSRIQTVGYGQDKPRSSNDTKE 224
>gi|88861307|ref|ZP_01135938.1| outer membrane protein A [Pseudoalteromonas tunicata D2]
gi|88816686|gb|EAR26510.1| outer membrane protein A [Pseudoalteromonas tunicata D2]
Length = 358
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + +++ L+ +A L P A+ +TDS G+ + N ++ RA+ I
Sbjct: 254 LFDFDKSAVKET--QALKDLAAHLAANPQAQAAVTGYTDSQGSKEYNEKLALRRANAIAK 311
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + ++V+ +N T R NN+R+ I +
Sbjct: 312 -YLTANGVNASQLTVKSVGETDLFASNATIAERLNNRRVTIDV 353
>gi|262173379|ref|ZP_06041056.1| putative sodium-type flagellar protein MotY precursor [Vibrio
mimicus MB-451]
gi|261890737|gb|EEY36724.1| putative sodium-type flagellar protein MotY precursor [Vibrio
mimicus MB-451]
Length = 345
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
V + L + L+ + + + + + +TD++G NL IS++R+++
Sbjct: 217 VIYFAFGQRTLSNEQKMRLRALYRYIVEDSRVNKVLVDGYTDNVGPSVANLTISRQRSEL 276
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
I + R + + VR +YP+ +NDT G+ N+R+ +++ R N +
Sbjct: 277 IAKE-LNRLGLAEEKVEVRAHGLRYPVASNDTAAGQAKNRRVTLRLV-RDNEQ 327
>gi|209968898|gb|ACJ02810.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|298530631|ref|ZP_07018033.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298510005|gb|EFI33909.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 274
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 16/119 (13%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT------DSIGTLK------- 124
+ E L + + +L + +L + + HT G
Sbjct: 123 ELLYEPGETELSSEGIEVLDKVVPVLKDL-EYPVLLAGHTSLVRDEFGAGWQALKDDVII 181
Query: 125 -NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S +RA + Y++++ + + F P T+ R+ N+R+EI +
Sbjct: 182 NPTWRLSLDRALNVYRYIMEQ-GVDPEMVRLEAFGEFQPRYGTRTEANRRQNRRVEIVL 239
>gi|183598599|ref|ZP_02960092.1| hypothetical protein PROSTU_01997 [Providencia stuartii ATCC 25827]
gi|188020776|gb|EDU58816.1| hypothetical protein PROSTU_01997 [Providencia stuartii ATCC 25827]
Length = 317
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRIGDMITCYIPVH----VSFVSEV 86
+ + +K + + + +++ I D + I + V
Sbjct: 105 IEDQSNYRFEKLKQSLEQAILKDPRLNELKPHLLIDMIDDGLRIQIVDSENRPMFMVGSA 164
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLI 142
++E +L+ IA +LN P+ I+I HTD + NN +S +RA+ + LI
Sbjct: 165 YVEPHMRDILRAIAPLLNDVPN-KISISGHTDDLPYANGANYNNWELSADRANASRRELI 223
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
G++ ++ + V G A +D N+ N+RI I + ++
Sbjct: 224 AGGLNQDKILRVVGMASSIHLDKNNGLA--PVNRRISIIVLNETETEQ 269
>gi|226330649|ref|ZP_03806167.1| hypothetical protein PROPEN_04569 [Proteus penneri ATCC 35198]
gi|225201444|gb|EEG83798.1| hypothetical protein PROPEN_04569 [Proteus penneri ATCC 35198]
Length = 167
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + L T + + +TD IG+ NL +S++RA
Sbjct: 40 SDVLFNFNKSTLKAEGQEALNGLYNELANIDPTQGRVVVIGYTDRIGSQNYNLPLSEKRA 99
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ YL+ + IS G + P+ N ++R+EI+I
Sbjct: 100 QSVVDYLVSK-GIPANSISAEGRGKENPVTGNTCDNVKARSALIDCLAPDRRVEIEI 155
>gi|38146952|gb|AAR11861.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
Length = 147
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I + + +L+ + K +T I I HTD+ GT + NL + ++RA
Sbjct: 40 TIEKIYFDFGKATIGDSDKAILEKVIQKAQKDTNTNIVIVGHTDTRGTDEYNLELGEQRA 99
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID------TNDTKVGRQNNQ 176
+ +K ++I+ S I+V+ P + + N+
Sbjct: 100 NAVKDFIIEHDKSLENRITVQSKGKSEPAVLVYSSNPEEAEHAHAKNR 147
>gi|209968906|gb|ACJ02814.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968938|gb|ACJ02830.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968940|gb|ACJ02831.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968948|gb|ACJ02835.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968950|gb|ACJ02836.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968952|gb|ACJ02837.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270695|gb|ADQ55748.1| OmpA [Haemophilus parasuis]
gi|312270697|gb|ADQ55749.1| OmpA [Haemophilus parasuis]
gi|312270699|gb|ADQ55750.1| OmpA [Haemophilus parasuis]
gi|312270701|gb|ADQ55751.1| OmpA [Haemophilus parasuis]
gi|312270703|gb|ADQ55752.1| OmpA [Haemophilus parasuis]
gi|312270705|gb|ADQ55753.1| OmpA [Haemophilus parasuis]
gi|312270707|gb|ADQ55754.1| OmpA [Haemophilus parasuis]
gi|312270709|gb|ADQ55755.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|228018097|gb|ACP52727.1| fibronectin-binding protein [Campylobacter coli]
Length = 224
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
E+ K ++K S E+ G ++ G T Y+ H F
Sbjct: 86 EQTKEVVNKPQVVTPAPAPVVSQSKCPEE------PREGALLDENGCEKTIYLEGHFDF- 138
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+V + F ++ IA IL++ ++ HTD+IG+ N +S+ RA+ + ++
Sbjct: 139 DKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAKE-LE 197
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ I G+ P +NDTK
Sbjct: 198 KFGVDKSRIQTVGYGQDKPRSSNDTKE 224
>gi|228018083|gb|ACP52720.1| fibronectin-binding protein [Campylobacter coli]
gi|228018091|gb|ACP52724.1| fibronectin-binding protein [Campylobacter coli]
gi|228018093|gb|ACP52725.1| fibronectin-binding protein [Campylobacter coli]
gi|228018101|gb|ACP52729.1| fibronectin-binding protein [Campylobacter coli]
gi|228018103|gb|ACP52730.1| fibronectin-binding protein [Campylobacter coli]
gi|228018105|gb|ACP52731.1| fibronectin-binding protein [Campylobacter coli]
gi|228018107|gb|ACP52732.1| fibronectin-binding protein [Campylobacter coli]
gi|228018115|gb|ACP52736.1| fibronectin-binding protein [Campylobacter coli]
gi|228018117|gb|ACP52737.1| fibronectin-binding protein [Campylobacter coli]
gi|228018125|gb|ACP52741.1| fibronectin-binding protein [Campylobacter coli]
gi|228018127|gb|ACP52742.1| fibronectin-binding protein [Campylobacter coli]
gi|228018129|gb|ACP52743.1| fibronectin-binding protein [Campylobacter coli]
gi|228018131|gb|ACP52744.1| fibronectin-binding protein [Campylobacter coli]
gi|228018133|gb|ACP52745.1| fibronectin-binding protein [Campylobacter coli]
gi|228018135|gb|ACP52746.1| fibronectin-binding protein [Campylobacter coli]
Length = 224
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
E+ K ++K S E+ G ++ G T Y+ H F
Sbjct: 86 EQTKEVVNKPQVVTPAPAPVVSQSKCPEE------PREGALLDENGCEKTIYLEGHFDF- 138
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+V + F ++ IA IL++ ++ HTD+IG+ N +S+ RA+ + ++
Sbjct: 139 DKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAKE-LE 197
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ I G+ P +NDTK
Sbjct: 198 KFGVDKSRIQTVGYGQDKPRSSNDTKE 224
>gi|224714303|gb|ACN62146.1| outer membrane protein A [Haemophilus parasuis]
gi|224714305|gb|ACN62147.1| outer membrane protein A [Haemophilus parasuis]
gi|224714307|gb|ACN62148.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|313203341|ref|YP_004041998.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312442657|gb|ADQ79013.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 662
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L LQ++ +LN P+ I I ++TD +G+ +N +S +R
Sbjct: 520 IQIENIFYESGKWELTPASENGLQVLVKLLNDNPNITIEISANTDLVGSNADNKALSTKR 579
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPID-------------TND----------TKV 170
A + YLI + ++ +R SV G+ + P+ ND T
Sbjct: 580 AKSVVDYLISKKIAPDRLTSV-GYGEEKPVVVDAAMAKKYPFLKENDVLDEAYVLKLTPA 638
Query: 171 ----GRQNNQRIEIQIF 183
Q N+R E ++
Sbjct: 639 QQEVANQINRRTEFRVL 655
>gi|255021445|ref|ZP_05293492.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus
ATCC 51756]
gi|254969150|gb|EET26665.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus
ATCC 51756]
Length = 307
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 20/185 (10%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMI 72
+KK+ D +L + +++ Q++ I ++ G I
Sbjct: 100 GQKKQSMPTNEAPADRSQTVDQRNLRELKNKLMAQIKSNPELAAFRHQLLISITPEGLRI 159
Query: 73 TCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-----TDSIGTLKN 125
+ LE + IA L++ P+ I+I H + G +
Sbjct: 160 QVVDSSKRPMFANGSTVLEPYARTIFSAIAPTLDELPN-RISITGHTDALRYLNEGRGYS 218
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S RA+ ++ L+Q G++ N+ + V G D N+R+ I + R
Sbjct: 219 NFNLSAGRANSVRQILVQSGLAENKVLRVVGMGSAVLFVPKDPDS--PLNRRVSIVVLSR 276
Query: 186 GNIKK 190
++
Sbjct: 277 AAEQR 281
>gi|299773247|gb|ADJ38698.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 369
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + + + + +TD IG NL +SQ+RA
Sbjct: 246 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 305
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN---------NQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N + ++R+EIQ+
Sbjct: 306 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDALKARKSLIVCLAPDRRVEIQV 361
>gi|238755499|ref|ZP_04616838.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia ruckeri ATCC 29473]
gi|238706255|gb|EEP98633.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia ruckeri ATCC 29473]
Length = 92
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+ ++ I L I + HTDS+G N +S RA + L I
Sbjct: 1 MQTVEKIGRALKAVDINHIRLNGHTDSMGEDSYNDRLSYGRASAVADTLAT-IGMPRANI 59
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
VRG P+ N T GR N+R+ + +
Sbjct: 60 DVRGLGKLNPVADNHTAKGRAENRRVAMIVT 90
>gi|238763376|ref|ZP_04624340.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638]
gi|238698475|gb|EEP91228.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638]
Length = 358
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + D IG NL +SQ RA
Sbjct: 231 SDVLFAFNKSTLKAEGQQALDQLYSQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQRRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
D ++ YL+ + I+ RG P+ N ++R+EI++
Sbjct: 291 DSVRDYLVSK-GIPADKITARGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIEV 346
>gi|304414298|ref|ZP_07395666.1| outer membrane protein A [Candidatus Regiella insecticola LSR1]
gi|304283512|gb|EFL91908.1| outer membrane protein A [Candidatus Regiella insecticola LSR1]
Length = 389
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 14/117 (11%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERAD 135
+ ++ L+ + L L + + L+ + + + +TD +G N +SQ RA
Sbjct: 265 DVLFDFNKSALKPEGLTQLDDLYSQLSSINPKNGSVLVLGYTDRMGKEAYNQALSQRRAQ 324
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT----------KVGRQNNQRIEIQI 182
+ YLI + IS RG P+ T T ++R+ I++
Sbjct: 325 SVMDYLITK-GIPADKISARGMGEANPV-TGSTCGDDMKRAAKIECLAPDRRVVIEV 379
>gi|56416952|ref|YP_154026.1| hypothetical protein AM854 [Anaplasma marginale str. St. Maries]
gi|254995132|ref|ZP_05277322.1| hypothetical protein AmarM_03987 [Anaplasma marginale str.
Mississippi]
gi|255003301|ref|ZP_05278265.1| hypothetical protein AmarPR_03517 [Anaplasma marginale str. Puerto
Rico]
gi|255004426|ref|ZP_05279227.1| hypothetical protein AmarV_03742 [Anaplasma marginale str.
Virginia]
gi|56388184|gb|AAV86771.1| hypothetical protein AM854 [Anaplasma marginale str. St. Maries]
gi|295243859|gb|ADF87315.1| peptidoglycan-associated lipoprotein precursor [Anaplasma
marginale]
Length = 236
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 43/189 (22%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+ L L ++GCGL S+EK + + +
Sbjct: 1 MLHRWLALCFLASFAVTGCGLFSKEKVGMDIVGVPFSAG--------------------- 39
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ ++ ++ +L + + + + I HTDS
Sbjct: 40 ---------------RVEKVYFDFNKYEIKGSGKKVLLGLVERMKADKRSTLLIIGHTDS 84
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP---IDTND---TKVGRQ 173
GT + NL + + RA+ +K +++ S + IS + P + ++D +
Sbjct: 85 RGTEEYNLALGERRANAVKEFILGCDRSLSPRISTQSRGKAEPEVLVYSSDFKEAEKAHA 144
Query: 174 NNQRIEIQI 182
N+R+ + +
Sbjct: 145 QNRRVVLIV 153
>gi|329964410|ref|ZP_08301491.1| OmpA family protein [Bacteroides fluxus YIT 12057]
gi|328525459|gb|EGF52507.1| OmpA family protein [Bacteroides fluxus YIT 12057]
Length = 252
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 72/204 (35%), Gaps = 36/204 (17%)
Query: 18 CGLASREK---------------------------KKVFLHKSNDTDIVNKRFGSSLDKA 50
C + + G +DK
Sbjct: 48 CSTMNNTTKGGVIGGGSGAAAGAIIGGLIGKGKGAAIGAAVGAAVGTGAGVAIGHKMDK- 106
Query: 51 EDEFQMQLQDTGIVVSRIGDMI----TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+ +++ + + + + + + L + L+ +A IL +
Sbjct: 107 KAAEAAKIEGAQVEQVTDNNGLPAVKVSFAAGILFAFNSSALSNEAKSSLRELAQILKED 166
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
P+T IAI HTD +GT + N+ +S+ RA +++YL GVS +F V G Y D N
Sbjct: 167 PTTDIAIIGHTDKVGTYEANMKVSKNRAYSVENYLQDCGVSPAQFKKVEGVGYTE-YDDN 225
Query: 167 DTKVGRQNNQRIEIQIFPRGNIKK 190
+ N+R+EI ++ + K
Sbjct: 226 LSAD---QNRRVEIYMYASEQMIK 246
>gi|298372620|ref|ZP_06982610.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298275524|gb|EFI17075.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 681
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 28/137 (20%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + + K+ L + +L P+ I + +HTDS+GT +N+ +SQ+R
Sbjct: 539 VKMENIFYEFGKWNITKESEAELNNLVKLLEDNPNITIELSAHTDSVGTDASNIELSQKR 598
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPID---------------TNDTKV-------- 170
A+ YLI + ++ +G+ P+ T
Sbjct: 599 ANSAVEYLIGA-GIAKDRLTAKGYGENKPVIVDSFLAQKYTFLKEGDELTPQFIAKLSKE 657
Query: 171 ----GRQNNQRIEIQIF 183
Q N+R E ++
Sbjct: 658 NQAICNQINRRTEFRVL 674
>gi|28872066|ref|NP_794685.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|301384434|ref|ZP_07232852.1| flagellar motor protein MotB [Pseudomonas syringae pv. tomato
Max13]
gi|302132278|ref|ZP_07258268.1| flagellar motor protein MotB [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28855319|gb|AAO58380.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|331014600|gb|EGH94656.1| flagellar motor protein MotB [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 341
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 63/178 (35%), Gaps = 15/178 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ + +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPIEAETSETKAEAVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NL 127
I + L+ F +L +A + P+ I+I HTD+ + N N
Sbjct: 158 IMDADNRPMFDSGSARLKPYFEDILLALADTIRSVPN-KISISGHTDATPFVGNNGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S RA+ + L+ ++ V G+A + + N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDRENPTN-PVNRRIDIVVLTK 272
>gi|312270731|gb|ADQ55766.1| OmpA [Haemophilus parasuis]
gi|312270733|gb|ADQ55767.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 359
>gi|325103778|ref|YP_004273432.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324972626|gb|ADY51610.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 706
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 10/116 (8%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + P L IA I+ P I SH DS + N L+S
Sbjct: 577 VFNFDNIYYDLDRAEIRPDARPALDKIALIMLTHPEVSIITSSHCDSRASNDYNKLLSIR 636
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-------TKVGRQNNQRIEIQ 181
R + K+YL+ + + I V + TN ++ +Q N+R E +
Sbjct: 637 RGNSAKAYLVAK-GVAANRIKVEYYGKTRL--TNRCYDGVPCSEEEQQMNRRTEFE 689
>gi|301156335|emb|CBW15806.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 285
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G+ + + L + ++ +A L + + + + +TD +G+ NL
Sbjct: 139 NGNSAFTLSGDFLFDFDKDTLTPRGKEVVDNVAAQLKETGAKEVKVAGYTDRLGSDAYNL 198
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI--------DTNDTKVGRQNNQRIE 179
+SQ RA+ +K+ LI+ GV+S I+ G+ + + K + N+R+E
Sbjct: 199 DLSQRRANRVKARLIEDGVTSE--ITAVGYGKVPQVKACNGYKHASKAEKDCLRPNRRVE 256
Query: 180 IQ 181
I
Sbjct: 257 IT 258
>gi|315182421|gb|ADT89334.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218]
Length = 316
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 4/140 (2%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP---MLQLIATI 102
+ E + I + I + +F + + L + +
Sbjct: 176 DSSQVEPMMNNSPIEYHIPKDMCAESIENMLSGQYAFHFGFDIHYEALDDVFVYSKVIDC 235
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
++K + + H D+ G+ + N +S RA I + L++ I + P
Sbjct: 236 ISKDSRIKVLLVGHADNQGSNQYNYALSLRRAVTISNILVEL-GVDPEQIVIEARGDSEP 294
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
I N R+ N+R+E+ +
Sbjct: 295 IANNAILEQRKKNRRVEMIL 314
>gi|71065432|ref|YP_264159.1| OmpA/MotB [Psychrobacter arcticus 273-4]
gi|71038417|gb|AAZ18725.1| probable OmpA/MotB [Psychrobacter arcticus 273-4]
Length = 211
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/195 (12%), Positives = 64/195 (32%), Gaps = 22/195 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+++ ++ + + + K N ++ + L+ + + Q G ++
Sbjct: 18 VMAVVMLLLVISVLQNTYAEIKHKQVMENSQQSDRQKIATLLEDI--QTSVATQGAGNLI 75
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFL----PMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + +V + + + I + L + + I ++ HTD+I
Sbjct: 76 DFNMEQSKITLKDNVFARGSACITPEAKTAFNNIEDKITSFLQQSSNAKIFVEGHTDNIP 135
Query: 122 TLKNNLLISQERADVIKSYLI--------------QRGVSSNRFISVRGFAYKYPIDTND 167
+ + +Y + Q S + I V G+ PI
Sbjct: 136 VSQPVTDYRRFCTVYDDNYTLSAARAREARKLLVGQLDTSIAKRIVVAGYGDSQPI-KGI 194
Query: 168 TKVGRQNNQRIEIQI 182
+ N+R+E+++
Sbjct: 195 SPEDDA-NRRVEVRL 208
>gi|307249694|ref|ZP_07531674.1| hypothetical protein appser4_4980 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858260|gb|EFM90336.1| hypothetical protein appser4_4980 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 164
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L K ++ +A L + + + +TD +G+ K NL +SQ RA+++
Sbjct: 23 DFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRLGSEKYNLDLSQRRANMV 82
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-------KVGRQNNQRIEIQ 181
K+ L+Q+GV++N I+ G+ + D K + N+R+E+
Sbjct: 83 KARLVQQGVTAN--INAVGYGKAQQVKACDGIPHGQELKDCLRPNRRVEVT 131
>gi|256830739|ref|YP_003159467.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256579915|gb|ACU91051.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 295
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 48/156 (30%), Gaps = 13/156 (8%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDMI--TCYIPVHVSFVSEVFLEKKFL 93
GS LD+ D + + G + V + + S L
Sbjct: 116 QALAGSILDRLHDRLRDLIARDGLQDLVAVQSVPGKSLHVVLAGDLLFEKSRAVLRGDVK 175
Query: 94 PMLQLIATILNKFPS--TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L + IL P +V+ + + + +S A + +LI+
Sbjct: 176 ETLLAVGEILRSAPHALSVVGHAAPGGAAAGSRGPWELSVAMAADVADFLIRDAGLPAER 235
Query: 152 ISVRGFAYKYPIDTNDTK-VGRQNNQRIEIQIFPRG 186
+ V G+ + P+ D G R+E+ +
Sbjct: 236 MLVAGYGDQRPLVDGDGAGAGW----RVELVLSSEN 267
>gi|209968908|gb|ACJ02815.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714283|gb|ACN62136.1| outer membrane protein A [Haemophilus parasuis]
Length = 369
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + + + + +TD IG NL +SQ+RA
Sbjct: 246 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 305
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV---------GRQNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N ++R+EIQ+
Sbjct: 306 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 361
>gi|307256515|ref|ZP_07538296.1| hypothetical protein appser10_5200 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864925|gb|EFM96827.1| hypothetical protein appser10_5200 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 283
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L K ++ +A L + + + +TD +G+ K NL +SQ RA+++
Sbjct: 142 DFLFDFDKDTLTAKGKDVVDNVAAQLKSSKAEQVKVAGYTDRLGSEKYNLDLSQRRANMV 201
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-------KVGRQNNQRIEIQ 181
K+ L+Q+GV++N I+ G+ + D K + N+R+E+
Sbjct: 202 KARLVQQGVTAN--INAVGYGKAQQVKACDGIPHGQELKDCLRPNRRVEVT 250
>gi|332519342|ref|ZP_08395809.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045190|gb|EGI81383.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 311
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ L + + I ++K + I I HTD+ G + N+ + + RA+ + +
Sbjct: 214 SINLTTQQREKVSKIVRYIDKVDNAKIRITGHTDNTGNRETNIGLGKNRAEFA-KSYLVQ 272
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ I+ PI N T+ G+ N+R+ + I
Sbjct: 273 NGITSNKINTFSKGPDEPIADNSTEAGKAKNRRLVVTI 310
>gi|313676967|ref|YP_004054963.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312943665|gb|ADR22855.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 618
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 40/109 (36%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
E + + I + L +K + +A +L++ P+ I
Sbjct: 495 EISESKTELNFALKPIEKGAIVELNNIYFEFDSYELSEKSSNEINKVADLLSQNPNLKIE 554
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
I +TD IG+ N +S++RA + LI + I G+ K
Sbjct: 555 IGGYTDEIGSASYNKELSRKRAKAVYEKLIIKDGVLEENIKAVGYGAKK 603
>gi|129141|sp|P04845|OMPA_SERMA RecName: Full=Outer membrane protein A; Flags: Precursor
gi|758300|emb|CAA25254.1| ompA protein [Serratia marcescens]
Length = 359
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + +TD++G+ + N +S++RA
Sbjct: 230 SDVLFNFNKSTLKAEGQQALDQLYTQLSSMDPKDGSVVVLGYTDAVGSDQYNQKLSEQRA 289
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--KVGRQ---------NNQRIEIQI 182
+ YL+ + + IS RG + N K GR ++R+EI++
Sbjct: 290 QSVVDYLVSK-GIPSDKISARGMGEADAVTGNTCGYKSGRATKAQIVCLAPDRRVEIEV 347
>gi|312963125|ref|ZP_07777610.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
gi|311282636|gb|EFQ61232.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
Length = 229
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 55/181 (30%), Gaps = 24/181 (13%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV--VSRIGDMITCYIPVHV 80
+++ + + +R +SL K Q LQ TG V +P +
Sbjct: 44 KQQMEAARQEERSKGDAAQR--ASLSKLLAAMQSDLQRTGETDLVDIDIQNRRLTLPDNA 101
Query: 81 SFVSEVFLEKKFLPML----QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L +AT + + + ++ HTD++ + +
Sbjct: 102 FARGSACITPAAQGALTLLSARVATFIKDYGQGQVLVEGHTDNLPVSRPVTDYERFCTVY 161
Query: 137 IKSYLIQR--------------GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+Y + R + V G+ P D N+R+E+Q+
Sbjct: 162 DDNYTLSAARAREARKLLIQAIEPQQARRVVVAGYGDSRPKPGIDPAS--ALNRRVEVQL 219
Query: 183 F 183
Sbjct: 220 V 220
>gi|269965412|ref|ZP_06179532.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269830058|gb|EEZ84287.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 339
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L + L+ + + ++ T I I HTD++G+ NL +S+ RA+ + +
Sbjct: 211 FEFGQKTLSRGQKATLEALYSYVSVDDRVTKILIDGHTDNVGSSLTNLSVSRTRAEQVTN 270
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
LI+ I R +YPI +N++ G+ N+R+ +++
Sbjct: 271 ALIEL-GVDESMIETRAHGSRYPIASNNSVNGQAKNRRVTLRLV 313
>gi|262039316|ref|ZP_06012632.1| outer membrane porin F [Leptotrichia goodfellowii F0264]
gi|261746660|gb|EEY34183.1| outer membrane porin F [Leptotrichia goodfellowii F0264]
Length = 104
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + + ++ ++ +LQ + + + + I HTDS GT + N+ +
Sbjct: 11 VVLDERSLLFDFDKSNVKPQYYGILQNLKEYI-EVNDYDVTIIGHTDSKGTNEYNMKLGM 69
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
RA+ +K+ +I+ GV ++R + V + P+ TN
Sbjct: 70 RRAESVKAKMIEFGVPASRIVGVESRGEEEPVATN 104
>gi|305667116|ref|YP_003863403.1| hypothetical protein FB2170_12741 [Maribacter sp. HTCC2170]
gi|88708050|gb|EAR00288.1| hypothetical protein FB2170_12741 [Maribacter sp. HTCC2170]
Length = 366
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 11/110 (10%)
Query: 84 SEVFLEKKFLPMLQ-LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L ++ + +L + P + I SHTD G +N +S+ RA + YLI
Sbjct: 260 GSATLTSSAKNIIDTRLMPVLQQNPGVKLEIASHTDVRGNSGSNQDLSERRAKAVADYLI 319
Query: 143 QRGVSSNRFISVRGFAYKYPIDTND-------TKVGRQNNQRIEIQIFPR 185
+ ++ + G+ N T+ N+R E ++
Sbjct: 320 TK-GVNSSLLVANGYGENK--VKNRCKEGVSCTEREHAVNRRTEFRLINN 366
>gi|320326605|gb|EFW82655.1| OmpA domain-containing protein [Pseudomonas syringae pv. glycinea
str. B076]
gi|320331074|gb|EFW87046.1| OmpA domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 830
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA L P+ I I H D +G ++N+ +S++
Sbjct: 711 SDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIMIAGHADQLGDPQSNMQVSKQ 770
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA IK+YL+ + + G + P+ D + R N+R+EI++
Sbjct: 771 RAQTIKTYLVGK-GVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLEPNRRVEIEV 826
>gi|253688926|ref|YP_003018116.1| OmpA domain protein transmembrane region-containing protein
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251755504|gb|ACT13580.1| OmpA domain protein transmembrane region-containing protein
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 366
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + TD +G+ + N +S++RA
Sbjct: 239 SDVLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRLGSEQYNQGLSEKRA 298
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + +S RG P+ T D R ++R+EI++
Sbjct: 299 QSVVDYLVSK-GIPANKVSARGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIEV 354
>gi|90581709|ref|ZP_01237497.1| hypothetical protein VAS14_19366 [Vibrio angustum S14]
gi|90437124|gb|EAS62327.1| hypothetical protein VAS14_19366 [Vibrio angustum S14]
Length = 261
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 3/147 (2%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
N +D E LQ V + + +++ L K+ L
Sbjct: 94 QTQNAVIQQQMDWLEYNTL-CLQPNYSEVELKERFLLYMEVDNQFALNKSTLLPKYRESL 152
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ A IL + + + +TDS G ++ N ++ ERA+ +K LI+ ISV
Sbjct: 153 RYAAEILKRQSHWHLQLTGYTDSQGHIQGNYMLGLERANAVKDSLIEN-GVDPNQISVFS 211
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N T + NN+++E ++
Sbjct: 212 VGENQAVADN-TLTQQLNNRKVEARVL 237
>gi|71906867|ref|YP_284454.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71846488|gb|AAZ45984.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 219
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 71/219 (32%), Gaps = 39/219 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MIK + ++ ++G G ++ +++V+L D + D
Sbjct: 1 MIKNIVKKSLVLALLAGIGFSAVAQERVYLIDQRDVVAKSGFGLCWRDGYWTPAAAAADK 60
Query: 61 TGIV--------------------------VSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
G V G+ IT + ++ L
Sbjct: 61 AGCECDKDLLPASACGAAPAAAPAGAAAAGVKPSGEKITVAA-DALFDFNKAVLRPAGKA 119
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
L + + VI HTD IG+ N +S++RA +K YL+ + +
Sbjct: 120 KLDELVSKAKAIKLEVILAVGHTDRIGSDSYNQKLSEKRAAAVKEYLVAK-GIEANRVYT 178
Query: 155 RGFAYKYPIDTNDTKVGRQN----------NQRIEIQIF 183
G K P+ T D G ++R++I++
Sbjct: 179 EGKGEKQPV-TGDKCKGNAKTKALIDCLQPDRRVDIEVI 216
>gi|254564113|ref|YP_003071208.1| hypothetical protein METDI5803 [Methylobacterium extorquens DM4]
gi|254271391|emb|CAX27404.1| Conserved hypothetical protein; putative OmpA family member
[Methylobacterium extorquens DM4]
Length = 717
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 7/140 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT----ILNK 105
+ + + L M + I + L IA +
Sbjct: 565 QKLDRRYTLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKRLSTIAEAINRTIKD 624
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P V I+ +TD++G+ +NL +S RA + S L Q ++ +G+ +Y
Sbjct: 625 NPQEVFLIEGYTDAVGSDIDNLSLSDRRAQSVASVLTQNFQVPPENLTTQGYGEQYLKV- 683
Query: 166 NDTKVGRQNNQRIEI-QIFP 184
+T+ + N+R+ + +I P
Sbjct: 684 -NTQEANRENRRVTVRRITP 702
>gi|91223208|ref|ZP_01258474.1| putative sodium-type flagellar protein MotY precursor [Vibrio
alginolyticus 12G01]
gi|91192021|gb|EAS78284.1| putative sodium-type flagellar protein MotY precursor [Vibrio
alginolyticus 12G01]
Length = 313
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L + L+ + + ++ T I I HTD++G+ NL +S+ RA+ + +
Sbjct: 185 FEFGQKTLSRGQKATLEALYSYVSVDDRVTKILIDGHTDNVGSSLTNLSVSRTRAEQVTN 244
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
LI+ I R +YPI +N++ G+ N+R+ +++
Sbjct: 245 ALIEL-GVDESMIETRAHGSRYPIASNNSVNGQAKNRRVTLRLV 287
>gi|253996272|ref|YP_003048336.1| OmpA/MotB domain-containing protein [Methylotenera mobilis JLW8]
gi|253982951|gb|ACT47809.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8]
Length = 365
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
Query: 78 VHVSFVSEVFLEKKFLPMLQ-LIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQERAD 135
+ E L+ +L + + + + + HTD +G+ N +S++RA+
Sbjct: 246 SKLFAFDEAKLKDTS--VLDNEVVPKMKENKIFASVKVTGHTDKLGSEAYNQKLSEKRAN 303
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQ 181
++ YLI +G+ ++R ++V G P+ + D GR N+R+EI+
Sbjct: 304 QVRDYLIAQGIEADRLVAV-GKGELVPVVSCDGVKGRKALIECLAPNRRVEIE 355
>gi|90407927|ref|ZP_01216101.1| hypothetical protein PCNPT3_06126 [Psychromonas sp. CNPT3]
gi|90310941|gb|EAS39052.1| hypothetical protein PCNPT3_06126 [Psychromonas sp. CNPT3]
Length = 304
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 48/130 (36%), Gaps = 3/130 (2%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+D ++ + I + H F + L +K L L I I HTD
Sbjct: 168 EDPACAITDLKRKIYATVASHFEF-DKSQLAEKDKKTLDAFINKLAGLNG-RILIAGHTD 225
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G N ++ RA ++ YL + +S V F PID + +N+R
Sbjct: 226 IQGAADYNQALATFRARAVEKYLRNKLDASQFIWEVTSFGESKPIDVKHNALANASNRRA 285
Query: 179 EIQIFPRGNI 188
+F G+I
Sbjct: 286 -FVVFKEGDI 294
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 24/169 (14%)
Query: 1 MIKEL-GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K+ L + + ++ C DT + + ++ + +
Sbjct: 1 MNKKTYALLIASLFSVFACST--------------DTYVSQENINKYENEVQKFLISECL 46
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + L+ + L + IAI HTD
Sbjct: 47 --------LPQRAIHMASVEHFKFDKYDLQASDQASIDLFIREIKDLKG-RIAIVGHTDV 97
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
G+LK N+ +S +RA IK YL ++ N ++ + P+ T T
Sbjct: 98 QGSLKYNVHLSAQRAQTIKDYLSKQLEVKNYDWEIKYYGETKPLSTQKT 146
>gi|312621091|ref|YP_003993819.1| outer membrane protein, ompa/motb family [Photobacterium damselae
subsp. damselae]
gi|311872812|emb|CBX86903.1| outer membrane protein, OmpA/MotB family [Photobacterium damselae
subsp. damselae]
Length = 210
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L + + +L + + S + I+ HTDS+GT N + RA +
Sbjct: 108 VYFNFDNSKLTRASIYILNKLIENVKASKSNYL-IEGHTDSVGTTSYNKDLGYRRAKSVI 166
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + GV+ ++ + P++TNDT +GR N+R+EI+
Sbjct: 167 EFFVGNGVNRSQLQGIS-EGELKPLETNDTSIGRSYNRRVEIK 208
>gi|330970538|gb|EGH70604.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 830
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA L P+ I I H D +G ++N+ +S++
Sbjct: 711 SDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSKQ 770
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA IK+YL+ + + G + P+ D + R N+R+EI++
Sbjct: 771 RAQTIKTYLVGK-GVPAELVDAIGEGSEKPLVKCDMQQPRAQLIQCLEPNRRVEIEV 826
>gi|330871941|gb|EGH06090.1| OmpA domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 666
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA L P+ I I H D +G ++N+ +S++
Sbjct: 547 SDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIMIAGHADQLGDPQSNMQVSKQ 606
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA IK+YL+ + + G + P+ D + R N+R+EI++
Sbjct: 607 RAQTIKTYLVGK-GVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLEPNRRVEIEV 662
>gi|239817632|ref|YP_002946542.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
gi|239804209|gb|ACS21276.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
Length = 205
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 53/182 (29%), Gaps = 18/182 (9%)
Query: 18 CGLASREKKKVFLHKSNDTDIV--NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
C + + ++ K L K + +G V D
Sbjct: 24 CSTPGTRVVLLPQADDKPSAVIVRAKDGEEVLSKPYQRATAAVGASGAPVVDQADPAKVQ 83
Query: 76 IPVHVSFV---------------SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ F L ++ + I + HTD+
Sbjct: 84 ADHKILFDMRPPAPQRYTVYFEVGGTTLTPASQQVMNEALMAAQSRSGSDIVVTGHTDTK 143
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G L+ N ++SQ RA + ++R + R I G + +V N+R+ I
Sbjct: 144 GALEQNDMLSQRRAQEVAQLFVERQFPAKR-IEAVGRGERELAVPTADEVDEPRNRRVTI 202
Query: 181 QI 182
++
Sbjct: 203 EV 204
>gi|170749438|ref|YP_001755698.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170655960|gb|ACB25015.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 269
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERADV 136
L + L+ + L P I HTD+ G N +S RA
Sbjct: 118 VFFAYDSARLTPEARIQLEPLGEALRAQPLAGHAFLIAGHTDAAGGRAYNRRLSLARARA 177
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+K++L++ + + V G+ P D + + N+R+E+ +
Sbjct: 178 VKAHLVETYGLAPERLRVHGWGPARPKDPDAPLS--RVNRRVEVSLI 222
>gi|126736583|ref|ZP_01752323.1| OmpA/MotB [Roseobacter sp. CCS2]
gi|126713896|gb|EBA10767.1| OmpA/MotB [Roseobacter sp. CCS2]
Length = 513
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L+ + + +A +L+ + + TDS+G + N +S+ RA +
Sbjct: 401 FETGSSNLDARAQDDIVRLARLLSSDAYRNKEAVFVGFTDSVGDPELNRQLSERRAGQVV 460
Query: 139 SYLIQRGVSSNRFIS--VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ ++ G+ P+ N+T GR+ N+R+E+ +
Sbjct: 461 QELLDENPDLQSNVALQTIGYGEISPLGCNETNTGRRINRRVEVWV 506
>gi|66048188|ref|YP_238029.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|63258895|gb|AAY39991.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
Length = 830
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA L P+ I I H D +G ++N+ +S++
Sbjct: 711 SDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSKQ 770
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA IK+YL+ + + G + P+ D + R N+R+EI++
Sbjct: 771 RAQTIKTYLVGK-GVPAELVDAIGEGSEKPLVKCDMQQPRAQLIQCLEPNRRVEIEV 826
>gi|54293440|ref|YP_125855.1| hypothetical protein lpl0489 [Legionella pneumophila str. Lens]
gi|53753272|emb|CAH14719.1| hypothetical protein lpl0489 [Legionella pneumophila str. Lens]
Length = 189
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 9/167 (5%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
SGC + N+ + R + D + L GI V+ +G
Sbjct: 25 SGC-------NRSGYIPENEVPKLPCRVDGACDATIIKMMTDLNKKGIKVASVGQNYLIS 77
Query: 76 IPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
IP F + L +L IA L +F I + S++ ++K ++ R+
Sbjct: 78 IPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSVKRERALTLARS 137
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
V+ YL + +R I +G PI + R N R+EI
Sbjct: 138 RVVSEYLWSQ-GVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEIT 183
>gi|170738630|ref|YP_001767285.1| peptidoglycan-associated lipoprotein [Methylobacterium sp. 4-46]
gi|168192904|gb|ACA14851.1| peptidoglycan-associated lipoprotein [Methylobacterium sp. 4-46]
Length = 168
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 2/109 (1%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQ-LIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ V F ++ A L+++P I+ H D GT + N
Sbjct: 50 QDFVVNVGDRVFFETDSTDLTATATATLDKQAQWLSRYPRYTFLIEGHADERGTREYNFS 109
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ R+ ++ YL RG++++R +V + + P+ + N+R
Sbjct: 110 LGARRSQAVRDYLTSRGIAASRMRTVS-YGKERPVAVCNDISCWSQNRR 157
>gi|299773229|gb|ADJ38689.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKPLIVCLAPDRRVEIQV 357
>gi|209964174|ref|YP_002297089.1| OmpA family protein (probable proton motor, MotY) [Rhodospirillum
centenum SW]
gi|209957640|gb|ACI98276.1| OmpA family protein (probable proton motor, MotY) [Rhodospirillum
centenum SW]
Length = 355
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L +LQ +A + + H D+ G N +S RA+ ++
Sbjct: 252 VFFDWDKATLTPDAEKVLQSVAADARTGGIAALQVTGHADTSGPADYNQRLSMRRAEAVR 311
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
YLI + I++ G P+ V +N+R I
Sbjct: 312 DYLIAQ-GIPAGEIAIEGRGETDPLVPTADGVREPSNRRGVII 353
>gi|332288389|ref|YP_004419241.1| outer membrane protein A [Gallibacterium anatis UMN179]
gi|330431285|gb|AEC16344.1| outer membrane protein A [Gallibacterium anatis UMN179]
Length = 247
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 10/119 (8%)
Query: 69 GDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
GD + F L+ + +++ + L+K I I +TD +G+ NL
Sbjct: 129 GDRTEYQLSSDFLFDFDSANLKPESQKVIEDLVNKLSKNKQ--IWITGYTDRLGSESYNL 186
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN------NQRIEI 180
+SQ RA +K+ ++ G+ ++R I G + + + G N+R+ I
Sbjct: 187 ALSQRRAVAVKNAMVALGIPASR-IKAIGMGKADQVKACEKETGSALRQCLAPNRRVVI 244
>gi|330874387|gb|EGH08536.1| OmpA domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 830
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA L P+ I I H D +G ++N+ +S++
Sbjct: 711 SDTLFAFGRADFQSLKVEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSKQ 770
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA IK+YL+ + + + G + P+ D + R N+R+EI++
Sbjct: 771 RAQTIKTYLVGK-GVPSELVDAVGEGSEKPLVKCDMQQPRAQLIQCLEPNRRVEIEV 826
>gi|312198597|ref|YP_004018658.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
gi|311229933|gb|ADP82788.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
Length = 371
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+ HTDS G N +S RA YL+ +GV + R + G+ P N T GR
Sbjct: 300 VAGHTDSTGPASLNEALSLGRAQAAVGYLVSQGVPAGR-LRAVGYGASRPAADNATPAGR 358
Query: 173 QNNQRIEIQ 181
N+R+EI
Sbjct: 359 AANRRVEIV 367
>gi|46398695|gb|AAS92033.1| IcmN protein [Legionella pneumophila]
Length = 167
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 9/169 (5%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
+S C + N+ + + D + L GI V+ +G
Sbjct: 1 LLSAC-------NRSGYIPENEVPKLPCSVDGACDATIIKMMTDLNKKGIKVASVGQNDL 53
Query: 74 CYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I F + L +L IA L +F I + S++ ++K ++
Sbjct: 54 ISIXASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSVKRERALTLA 113
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
R+ V+ YL + +R I +G PI + R N R+EI
Sbjct: 114 RSRVVSEYLWSQ-GVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEIT 161
>gi|224714291|gb|ACN62140.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|163794140|ref|ZP_02188113.1| hypothetical protein BAL199_01964 [alpha proteobacterium BAL199]
gi|159180754|gb|EDP65273.1| hypothetical protein BAL199_01964 [alpha proteobacterium BAL199]
Length = 250
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 62/193 (32%), Gaps = 22/193 (11%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L++ + +I+G + + ++ G L E +L +
Sbjct: 66 SISLALGMTVSIAG----------EAPPRPLGIETEHRGVGFRLSYLEPLLTAKLSGDPV 115
Query: 64 ----VVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ R GD + +P + F + L + +AT L P+ I + H D
Sbjct: 116 LRTARIVRAGDRLIITLPSDLLFEAGQARLSTTARSAVAELATALVTLPN-RIDVVGHAD 174
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSS---NRFISVRGFAYKYP--IDTNDTKVGR- 172
+ + ++ + + +R +V G I R
Sbjct: 175 PRPIPPGAPFGTNRALSLARADAVAVALVDAGLSRMPTVEGMGDSRFYTIAPTAPMERRY 234
Query: 173 QNNQRIEIQIFPR 185
+R+++ +FP
Sbjct: 235 ALARRVDVVLFPE 247
>gi|146340837|ref|YP_001205885.1| hypothetical protein BRADO3900 [Bradyrhizobium sp. ORS278]
gi|146193643|emb|CAL77660.1| conserved hypothetical protein; putative outer membrane protein
with periplasmic-binding domain (ABC-type)
[Bradyrhizobium sp. ORS278]
Length = 550
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 57/162 (35%), Gaps = 4/162 (2%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
++ + ++ R + +D + R+
Sbjct: 360 SKEGQEVAQRTVVGLSPTPRPAAEVDTRPCTLSAKWTGNPQEFCRLRTQARALDVSFRFQ 419
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ V L+ P L + L + P + + D G + N +S +RA+ +K L
Sbjct: 420 TNSVELDNLAAPNLFRVMQALRETPQARLLLAGFADRRGNYQANCRLSLQRAESVKQSLA 479
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
GVS+ + RG+ + P+ N + N+R+EI +
Sbjct: 480 SLGVSN---VDTRGYCDEVPVRDNGGDE-FEKNRRVEIYLLS 517
>gi|126734277|ref|ZP_01750024.1| OmpA/MotB [Roseobacter sp. CCS2]
gi|126717143|gb|EBA14007.1| OmpA/MotB [Roseobacter sp. CCS2]
Length = 527
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L+ + + ++ +A + +F + + DS+G N ++Q RAD ++
Sbjct: 413 FNTGSSVLDVESIRNIEELAARMEAGEFDGLEVLLVGFADSVGERARNTALAQNRADAVR 472
Query: 139 SYLIQRGVSSN-RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L N + + + P+ N+ +VGR+ N+R+E+ +
Sbjct: 473 NVLADTLSRENAQRLRPISYGELLPLSCNEDEVGRERNRRVEVWL 517
>gi|114562634|ref|YP_750147.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114333927|gb|ABI71309.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 289
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 2/111 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V V L + LQ I L+ P + I ++TDS G N +S +
Sbjct: 177 IAFTVLNYQEGGVELTRFSSQQLQKIQRYLSFDPEVELVLIDAYTDSYGGRSVNQKVSDK 236
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RAD +K LI I G K + ND R+ N+R+ I+I
Sbjct: 237 RADSVKDILIA-SGIPKDRIHTSGHGEKRHVTGNDLAEERKMNRRVVIKIT 286
>gi|299773249|gb|ADJ38699.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|45758047|gb|AAO85782.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 378
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L ++ + I + +TD IG +NL +SQ RA
Sbjct: 255 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRIGKEASNLKLSQRRA 314
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ T D GR ++R+EIQ+
Sbjct: 315 ETVANYIVSK-GINPANVTAVGYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 370
>gi|99082759|ref|YP_614913.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99039039|gb|ABF65651.1| OmpA/MotB [Ruegeria sp. TM1040]
Length = 517
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 5/118 (4%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNL 127
D + + + + L+A L + + +D G + N
Sbjct: 399 DGLQRLTTSFRFEAGSSRPDAQSRNNIDLLARELEAGVYDGKRLVFVGFSDGEGPAEGNR 458
Query: 128 LISQERADVIKS---YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I+ +RA+ ++ + I + PI +D+ GRQ N+R+E+ I
Sbjct: 459 AIAMKRAESVRRAVERAAETANLDRISIETAAYGEALPIACDDSAWGRQANRRVEVWI 516
>gi|227329084|ref|ZP_03833108.1| outer membrane protein A [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 361
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + TD +G+ + N +S++RA
Sbjct: 234 SDVLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRLGSEQYNQGLSEKRA 293
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + +S RG P+ T D R ++R+EI++
Sbjct: 294 QSVVDYLVSK-GIPANKVSARGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIEV 349
>gi|296313331|ref|ZP_06863272.1| OmpA family protein [Neisseria polysaccharea ATCC 43768]
gi|296840145|gb|EFH24083.1| OmpA family protein [Neisseria polysaccharea ATCC 43768]
Length = 231
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 81/215 (37%), Gaps = 34/215 (15%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-----SLDKAED-- 52
M K+L L ++F+ SG +AS + ++V +G DKA
Sbjct: 1 MTKQLKLSALFVALLASGTAMASEAHIHGYTVSGQSQEVVRNNYGECWKNTYFDKATQGR 60
Query: 53 -EFQMQLQDTGIVVSRIG----DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
E ++ + V D + + L + L+++A L +
Sbjct: 61 VECGDAVEPAPVAVVEQAPQYVDETVSLSAKTLFGFDKDVLRAEAQDNLKVLAQRLGQTN 120
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP----- 162
+ ++ HTD +G+ K N +S+ RA+V+ +YL+ GV +++ S G
Sbjct: 121 VQSVRVEGHTDFMGSEKYNQTLSERRANVVANYLVSNGVPASKT-SAVGLGESQAQMTQV 179
Query: 163 ----IDTNDTKVGRQN-----------NQRIEIQI 182
+ K + ++R++++I
Sbjct: 180 CEAEVAKLGAKASKAKKREALIACIEPDRRVDVKI 214
>gi|238757655|ref|ZP_04618839.1| Outer membrane protein A [Yersinia aldovae ATCC 35236]
gi|238704160|gb|EEP96693.1| Outer membrane protein A [Yersinia aldovae ATCC 35236]
Length = 350
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + D IG NL +SQ RA
Sbjct: 223 SDVLFAFNKSNLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQRRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
D ++ YL+ + I+ RG P+ N ++R+EI++
Sbjct: 283 DSVRDYLVSK-GIPADKITARGEGQANPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 338
>gi|312270719|gb|ADQ55760.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|299773235|gb|ADJ38692.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|262166026|ref|ZP_06033763.1| outer membrane protein [Vibrio mimicus VM223]
gi|262025742|gb|EEY44410.1| outer membrane protein [Vibrio mimicus VM223]
Length = 278
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 52/148 (35%), Gaps = 12/148 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + T V + + + ++ + K++
Sbjct: 114 LNQLEQQLDYVTSQTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQFAINSTEINPKYMGN 173
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + A L +++ H DS G + N ++ RA+ +K + + I+
Sbjct: 174 LAIAADKLKDRQDLTLSVTGHADSSGNSEFNEKLAMGRAEQVKR-YLTIFGLAPERITTH 232
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
P+ +T + N+R+ I+I
Sbjct: 233 SLGESLPLYVGETPGVKLTNRRVSIEII 260
>gi|89052778|ref|YP_508229.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88862327|gb|ABD53204.1| phosphate ABC transporter substrate-binding protein, PhoT family
[Jannaschia sp. CCS1]
Length = 513
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 63/150 (42%), Gaps = 7/150 (4%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ +R +++ A ++ +Q T + V + ++ + L+ + +
Sbjct: 366 ALQGERLSNAIRAAGEDVDLQELQTVMEVLDSAERLSTTLR---FNAGGADLDIQSRASV 422
Query: 97 QLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS- 153
+A + + F + +D G N +S RADV++ ++ GV++ +
Sbjct: 423 GRLAAAIERGTFDGRQLIFAGFSDGDGPSTVNARLSLRRADVVRDAVMAAGVAALDRVEL 482
Query: 154 -VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
GF P+ +DT GR N+R+E+ +
Sbjct: 483 VTVGFGEAMPMACDDTDWGRAVNRRVEVWV 512
>gi|258622513|ref|ZP_05717535.1| lateral flagellar MotY-like protein [Vibrio mimicus VM573]
gi|258585213|gb|EEW09940.1| lateral flagellar MotY-like protein [Vibrio mimicus VM573]
Length = 358
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
V + L + L+ + + + + + +TD++G NL IS++RA++
Sbjct: 230 VIYFAFGQRTLSNEQKMRLRALYRYIVEDSRVNKVLVDGYTDNVGPSVANLTISRQRAEL 289
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
I + R + + VR +YP+ +NDT G+ N+R+ +++ R N +
Sbjct: 290 IAKE-LNRLGLAEEKVEVRAHGLRYPVASNDTATGQAKNRRVTLRLV-RDNEQ 340
>gi|209968928|gb|ACJ02825.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714287|gb|ACN62138.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|144898366|emb|CAM75230.1| flagellar motor protein MotB [Magnetospirillum gryphiswaldense
MSR-1]
Length = 319
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 14/152 (9%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ + + + L + GD + + L ++ +A
Sbjct: 167 EELQRYRSEFFGKLRKVL-GERQGIRIEGDRFVFQ-SELLFDSASADLGVSGEQQVRQLA 224
Query: 101 TIL----NKFP---STVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSN 149
L + P + V+ + HTD G +N +S RA + LI GV ++
Sbjct: 225 KTLIDLSKQIPKEVNWVLRVDGHTDKRPIKSGRFPSNWELSTARAISVIRTLIDAGVPAD 284
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
R ++ GF P+D +D++ N+RIEI+
Sbjct: 285 R-LAAAGFGEFLPLDNSDSEAALAKNRRIEIR 315
>gi|149371350|ref|ZP_01890836.1| OmpA/MotB [unidentified eubacterium SCB49]
gi|149355488|gb|EDM44047.1| OmpA/MotB [unidentified eubacterium SCB49]
Length = 247
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 7/113 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
I + + L I + L P + I HTDSIG+ N +
Sbjct: 135 KIHIKNHTIEFKYNAPQITDDHSFKQLDKIVSYLKNDPQITVKITGHTDSIGSDNFNKSL 194
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S +RA+ +K Y + + R I + G K P + N+R+EI++
Sbjct: 195 SLKRANAVKRYFLSK-KIDTRRIIINGMGEKSPKSKLAS-----QNRRVEIEL 241
>gi|116750906|ref|YP_847593.1| OmpA/MotB domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116699970|gb|ABK19158.1| OmpA/MotB domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 522
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 56/152 (36%), Gaps = 6/152 (3%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
+ S++ E F +D + IG T V L +
Sbjct: 370 TSPKAGTVKPDSVNSLETAFAPLSRDAWSALQEIG---TLKTDPVVFQSGTSDLSFQGKL 426
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+ L +P+ + I+ HT + G + N +S+ER++ + YL + +
Sbjct: 427 EIDRAVERLKHYPNFRVVIKGHTGTEGDPEANKTLSRERSEAVARYLEVTYNINPNRLLP 486
Query: 155 RGFAYKYPIDTNDTKVGRQNN-Q--RIEIQIF 183
GF + P+ N + R N + R+E+ +
Sbjct: 487 VGFGGEKPLPRNPGESTRSYNYRLPRVEMVLV 518
>gi|330893498|gb|EGH26159.1| ompA family protein [Pseudomonas syringae pv. mori str. 301020]
Length = 77
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I +TDS G+ ++N+ +SQ+RA + +YL +GV + +SVRG PI +N GR
Sbjct: 1 IVGYTDSTGSRQHNMDLSQQRAQSVATYLTSQGVDQSH-LSVRGAGPDQPIASNADVNGR 59
Query: 173 QNNQRIEIQIFP 184
N+R+E+ + P
Sbjct: 60 AQNRRVEVNLKP 71
>gi|296274015|ref|YP_003656646.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM
7299]
gi|296098189|gb|ADG94139.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299]
Length = 256
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 58/172 (33%), Gaps = 14/172 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL--QDTGIVVSRIGDMITCYIPVH 79
S K + ++ + + E Q+ Q + ++ + T IP
Sbjct: 71 STNTSKDASNDADSNAQDTAAAADEMSQIAQEVNEQVSTQSEQVQITEGNNEFTLDIPSS 130
Query: 80 VSFV-SEVFLEK-KFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
+ F E L + IA ++ P T I I +TD + +
Sbjct: 131 IMFNEGEYNLSNKSAKNFISKIARVIRTMPQTFDIEIIGYTDRSNFKSDTIPRDGWDLSA 190
Query: 137 IKSYLIQRGVSSNRF----ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+++ + + + NR + V ++ P N + N+R+EI+
Sbjct: 191 LRAISVVKELIKNRIDPAQLKVSAYSSYRPKSENAVE-----NRRVEIRFVS 237
>gi|260914077|ref|ZP_05920550.1| lipoprotein PlpD [Pasteurella dagmatis ATCC 43325]
gi|260631710|gb|EEX49888.1| lipoprotein PlpD [Pasteurella dagmatis ATCC 43325]
Length = 275
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L K ++ +AT L + + + TD +G+ NL +SQ RA+ +
Sbjct: 139 DFLFDFDKDALTAKGKEVVDSVATQLKSSGAKEVKVAGFTDRLGSAAYNLDLSQRRANRV 198
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPI-DTNDTKVGRQN------NQRIEIQ 181
K+ LI++GV++N I+ G+ + + G+Q N+R+EI
Sbjct: 199 KARLIEQGVNAN--INAVGYGKAQQVKACEEYPFGKQLKDCLRPNRRVEIT 247
>gi|46398697|gb|AAS92034.1| IcmN protein [Legionella pneumophila]
Length = 166
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+S C + N+ + R + D + L GI V+ +G
Sbjct: 1 LSACH-------RSGYISENEVPKLPCRVDGACDATIIKMMTDLNKKGIKVASVGQNYLI 53
Query: 75 YIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
IP F + L +L IAT L +F I + S++ ++K ++ R
Sbjct: 54 SIPASALFADQSPRLHWASYSLLNEIATFLKQFRKIAITVTSYSSKYVSVKRERALTLAR 113
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ V+ YL + +R I +G PI + R N R+EI
Sbjct: 114 SRVVSEYLWSQ-GVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEIT 160
>gi|330887804|gb|EGH20465.1| ompA family protein [Pseudomonas syringae pv. mori str. 301020]
Length = 156
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 46/152 (30%), Gaps = 38/152 (25%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK--------------------- 41
+ L + + +SGC ++ + S K
Sbjct: 5 RRLIIVATAVAMLSGCATSNPYDNQGQAQSSGGMSKTAKYGGLGALAGAVAGAAIDHNHR 64
Query: 42 ----------------RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VS 84
+G DK E + + +TG+ V R GD I +P +++F
Sbjct: 65 GKGALIGAAVAGAASAGYGYYADKQEAALRASMANTGVEVQRQGDQIKLIMPGNITFATD 124
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ F L +A L +F I I +
Sbjct: 125 SSAIASSFYSPLNNLANSLKQFNQNNIEIVGY 156
>gi|209968912|gb|ACJ02817.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714271|gb|ACN62130.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|209968920|gb|ACJ02821.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|148973906|ref|ZP_01811439.1| outer membrane protein [Vibrionales bacterium SWAT-3]
gi|145965603|gb|EDK30851.1| outer membrane protein [Vibrionales bacterium SWAT-3]
Length = 212
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 50/155 (32%), Gaps = 8/155 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + L++ + GC + + D +
Sbjct: 1 MKHIKLALLSSILLMGCAETPDTTMTRHQIDDLADNDRDGVIN-----QRDLCADTPEGV 55
Query: 62 GIVVSRIGDMIT---CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + + + + L+ + +L + +L + P + + T
Sbjct: 56 TVDIKGCANWKIAEDVEVLSVAFDFDKYDLKPEHTAVLNELVRLLGEQPDASVTLVGDTS 115
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
S GT N ++++R VI+ LI RG+ S R
Sbjct: 116 SEGTNTYNKALAKKRTGVIRDALIDRGIDSKRIFE 150
>gi|114797285|ref|YP_758982.1| putative chemotaxis MotB protein [Hyphomonas neptunium ATCC 15444]
gi|114737459|gb|ABI75584.1| putative chemotaxis MotB protein [Hyphomonas neptunium ATCC 15444]
Length = 287
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 65/175 (37%), Gaps = 13/175 (7%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--TGIVVSRIGDMITCYI 76
G + + + K+ L ++ + + +++ + I I
Sbjct: 114 GKTKDAQDQTEDVDTLAKQAEEKQIADELQGLKESLSAESRQLSEHLMIKMSPEGIVLEI 173
Query: 77 PVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKNNLL 128
+ + + + ++ ++A +F I I HTDS G + +N
Sbjct: 174 TDSESTPLFPLGRSEPSETMVQLIDVVAESFAEF-DNDIKIVGHTDSHRYRNGAIYDNWN 232
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S +RA+ + L + + S+R V G A P+ +D + N+RI I I
Sbjct: 233 LSADRANAARRLLSRADIPSDRIREVSGKADTDPLVKDDPQA--AQNRRISITIL 285
>gi|302036309|ref|YP_003796631.1| hypothetical protein NIDE0942 [Candidatus Nitrospira defluvii]
gi|300604373|emb|CBK40705.1| exported protein of unknown function, OmpA family [Candidatus
Nitrospira defluvii]
Length = 273
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 65/180 (36%), Gaps = 7/180 (3%)
Query: 6 GLSMFIMTTISG---CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
GL F+ +S A ++ ++ V++ S D + T
Sbjct: 33 GLVFFLAVVVSAFWYYSQADEAAHSNPSAEALNSSQVSQVLKDSTDH--APVSASIPTTH 90
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + T + + F L LQ A L I +Q +TD G
Sbjct: 91 VDTAPLAIRSTDILHDDIHFEIGRKGLTDDGKAALQRHAEFLKSERDWGILLQGYTDQQG 150
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N ++ +RA+ +K +L+ I + + +++ V R+ N+R+ ++
Sbjct: 151 SRSFNKILGMKRAETVKQHLMAL-GVPESSIRTVSLGEEGALCIDNSDVCRRMNRRVHVE 209
>gi|332290107|ref|YP_004420959.1| peptidoglycan-associated outer membrane lipoprotein [Gallibacterium
anatis UMN179]
gi|330433003|gb|AEC18062.1| peptidoglycan-associated outer membrane lipoprotein [Gallibacterium
anatis UMN179]
Length = 150
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 57/176 (32%), Gaps = 31/176 (17%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L + ++ SS DKA D Q
Sbjct: 1 MKKLAKVLM-----------------------VAAPVLALAACSSSDKAAD------QQG 31
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + + ++ ++ +L A L S+ + ++ HTD G
Sbjct: 32 KLYGNMTAQELQQRYNTVYFGFDKYDIQPEYAQLLDAHAQYLTDT-SSKVQVEGHTDPRG 90
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
T + N+ + Q RAD + ++ +S + + P T+ ++R
Sbjct: 91 TPEYNIALGQRRADAV-KSYLEGKGVQGGQLSTISYGEEKPAVLGHTEADYAKDRR 145
>gi|330818872|ref|YP_004351089.1| Outer membrane protein [Burkholderia gladioli BSR3]
gi|327374414|gb|AEA65766.1| Outer membrane protein [Burkholderia gladioli BSR3]
Length = 231
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 71/204 (34%), Gaps = 37/204 (18%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL--QDTGIVV 65
+ + ++GC + + + I+N S + ED + + + G
Sbjct: 29 VIATLIGLAGCATEHKVAHTTYAPQEGSLQIMNVPVVSDVAVIEDVPRQYIWKKGGGAGA 88
Query: 66 SRIGDMI-----------------------------TCYIPVHVSFVSEVFLEKKFLPML 96
G + + +V L+ K L
Sbjct: 89 PVDGGALFSGPQHFVWQVPQPDLASIMKQEMPPPSESTASNTVYFYVDSSQLDAKARAGL 148
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
++ ++ + I +TD+ GT + N +S+ RA +K YL+ RGV + + I+
Sbjct: 149 DVL-----PIEASHVQIDGYTDNTGTSRYNRRLSERRALAVKRYLMVRGVDAAK-ITTTA 202
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEI 180
+ +N T GR N+R ++
Sbjct: 203 HGESGAVASNHTAHGRALNRRADV 226
>gi|118591641|ref|ZP_01549037.1| OmpA/MotB [Stappia aggregata IAM 12614]
gi|118435634|gb|EAV42279.1| OmpA/MotB [Stappia aggregata IAM 12614]
Length = 222
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 12/171 (7%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+GC + KSN T ++ + E+ G V+ D +
Sbjct: 60 AGCSNS--------EFKSNTTFSLDDVVNLGIVDREEVAATPPSGDGAPVTAATDPLPTI 111
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATIL--NKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + L L ++ +L KF + + HTD+ G+ + NL +SQ+R
Sbjct: 112 DMEILFDYNSASLRHDQAAKLAELSRMLSQEKFKNYRFLLLGHTDAKGSAQYNLTLSQQR 171
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
A I ++ G S + G D D G + N+R+++ + P
Sbjct: 172 AQTIAGFVTAWGSLSEERVLASGMGASKLKDQGD-PYG-EQNRRVQLVLLP 220
>gi|258621333|ref|ZP_05716367.1| Outer membrane protein [Vibrio mimicus VM573]
gi|258586721|gb|EEW11436.1| Outer membrane protein [Vibrio mimicus VM573]
Length = 278
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 52/148 (35%), Gaps = 12/148 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + T V + + + ++ + K++
Sbjct: 114 LNQLEQQLDYVTSQTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQFAINSTEINPKYMGN 173
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + A L +++ H DS G + N ++ RA+ +K + + I+
Sbjct: 174 LAIAADKLKARQDLTLSVTGHADSSGNAEFNEKLAMGRAEQVKR-YLTIFGLAPERITTH 232
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
P+ +T + N+R+ I+I
Sbjct: 233 SLGESLPLYVGETPGVKLTNRRVSIEII 260
>gi|238792361|ref|ZP_04635995.1| Outer membrane protein A [Yersinia intermedia ATCC 29909]
gi|238728287|gb|EEQ19807.1| Outer membrane protein A [Yersinia intermedia ATCC 29909]
Length = 358
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + L+ + + D IG NL +SQ RA
Sbjct: 231 SDVLFAFNKATLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQRRA 290
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTK-------VGRQNNQRIEIQI 182
D ++ YL+ + I+ RG P+ T T ++R+EI++
Sbjct: 291 DSVRDYLVSK-GIPADKITARGEGQANPVTGSTCATVKPRAALIECLAPDRRVEIEV 346
>gi|312270715|gb|ADQ55758.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357
>gi|91792756|ref|YP_562407.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91714758|gb|ABE54684.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 289
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
V + L L+ + L+ P + I TDS G N +S
Sbjct: 177 IAFTVLTYEEGDTELTHFSKYQLKKVQEYLSYDPEVELVLIDGFTDSYGPKSINQTVSNN 236
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD IK LI G+ ++ IS G K + +N+ R+ N+R+ IQ+
Sbjct: 237 RADSIKQLLIASGIPKDKIIS-NGHGEKRHVASNELVQERERNRRVVIQL 285
>gi|262198303|ref|YP_003269512.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262081650|gb|ACY17619.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 170
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 55/173 (31%), Gaps = 25/173 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L ++ + +++ CG +S + + + + E++ + +
Sbjct: 10 LSIAYLGLFSLAACGGSSASSDDSTTPEFREDEEPLASDEMAASPGEEQIEPE------- 62
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ L L+ +A L + I+ H D G
Sbjct: 63 ------------SRVFFALDSAELTPLAQSELEDVAAWLVDNEERELVIEGHADPQGAAD 110
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
N +S++RA + +L+ +G+ + R R F + N+R
Sbjct: 111 YNQELSEKRAIAVYQFLLDQGIPAERMER-RAFGESE-----ADEAPYSINRR 157
>gi|52840692|ref|YP_094491.1| LphA (DotK) [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|148360936|ref|YP_001252143.1| hypothetical protein LPC_2896 [Legionella pneumophila str. Corby]
gi|296105998|ref|YP_003617698.1| LphA (DotK) [Legionella pneumophila 2300/99 Alcoy]
gi|2897615|emb|CAA75327.1| LphA protein [Legionella pneumophila]
gi|52627803|gb|AAU26544.1| LphA (DotK) [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|148282709|gb|ABQ56797.1| LphA (DotK) [Legionella pneumophila str. Corby]
gi|295647899|gb|ADG23746.1| LphA (DotK) [Legionella pneumophila 2300/99 Alcoy]
gi|307609255|emb|CBW98722.1| Dot/Icm secretion system protein [Legionella pneumophila 130b]
Length = 189
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 2/140 (1%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIAT 101
+ D + L GI V+ +G IP F + L +L IA
Sbjct: 45 VDGACDATIIKMMTDLNKKGIKVASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAA 104
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
L +F I + S++ ++K ++ R+ V+ YL + +R I +G
Sbjct: 105 FLKQFRKIAITVTSYSSKYVSVKRERALTLARSRVVSEYLWSQ-GVDSRIIFTQGLGSDK 163
Query: 162 PIDTNDTKVGRQNNQRIEIQ 181
PI + R N R+EI
Sbjct: 164 PITSYTLGGDRSPNARVEIT 183
>gi|284042327|ref|YP_003392667.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
gi|283946548|gb|ADB49292.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
Length = 913
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 4/111 (3%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ L + L+ +A L + I HTD+ G
Sbjct: 805 VLVIPSDGQFATDSARLLPAGVRHLRRVAADL--DGARSIRSVGHTDARG-DATANRALG 861
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+++R R + V P + T GR N+R+E+ +
Sbjct: 862 RARAAAVCAVLRRAGVRAR-LPVASAGESRPRADDATPAGRALNRRVELVV 911
>gi|283851000|ref|ZP_06368285.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
gi|283573646|gb|EFC21621.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
Length = 344
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 58/143 (40%), Gaps = 11/143 (7%)
Query: 48 DKAEDEFQMQLQD--TGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIAT 101
+ E Q + + + V++ D + I + + V L +L +
Sbjct: 154 QQVEKALQESVPELAGQVSVTQEKDKVRIEIMDKSDRPLFDLGGVALLPDAQRILAAVTG 213
Query: 102 ILNKFPSTVIAIQSHTDSIGTL--KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
++ K +AI+ HTD+ +N +S RA + ++Q+G+ ++ +V GFA
Sbjct: 214 VIRKD-GIKVAIEGHTDAYRYSGTYSNWDLSAGRALSARRLMLQQGLPPDQVAAVSGFAD 272
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
P R N+RI + +
Sbjct: 273 TRPYVPGKPLDAR--NRRISLLL 293
>gi|163756036|ref|ZP_02163152.1| OmpA/MotB [Kordia algicida OT-1]
gi|161323910|gb|EDP95243.1| OmpA/MotB [Kordia algicida OT-1]
Length = 277
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 8/113 (7%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD----- 135
V L K L+ + L K + I +Q H G ++ L S+ +
Sbjct: 165 FKTGRVTLIKSSKKELEKLVRFLKKNRNIHIEVQGHVCCGGDDDSDALNSETGTETLSVD 224
Query: 136 --VIKSYLIQRGVSSNRFISVRGFAYKYPI-DTNDTKVGRQNNQRIEIQIFPR 185
+ S ++ +G+A+K P+ R N+R+EI+I
Sbjct: 225 RARFIYKYLISRGISKERLTYKGYAFKAPLRFPEKGSRDRSANRRVEIEITKN 277
>gi|90421593|ref|YP_529963.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
gi|90103607|gb|ABD85644.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 617
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + LQ IA LNK P V I+ HTD++G +NL +
Sbjct: 484 IDLDTITFELGSWEIPPDQAAKLQAIADGLNKSIARNPREVFLIEGHTDAVGNDTDNLSL 543
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA+ L Q+ ++ +G+ +Y + N+R+ + +I P
Sbjct: 544 SDRRAEAAAQLLTQQFGVPAENLTSQGYGEQYLKVPTQAPE--RQNRRVTVRRITP 597
>gi|83950725|ref|ZP_00959458.1| OmpA domain protein [Roseovarius nubinhibens ISM]
gi|83838624|gb|EAP77920.1| OmpA domain protein [Roseovarius nubinhibens ISM]
Length = 493
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 65/160 (40%), Gaps = 8/160 (5%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
L + D RF +++ +A ++ ++ + V +T
Sbjct: 336 DQLPEEIAIDAQGDRFANAVLRAGEDVSLEDLQQMVRVLTPLKRLTTTFR---FEPGSAR 392
Query: 88 LEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ + + +A L + + + + +D G N I+++RA ++ ++
Sbjct: 393 LDAQSRSNVTQLAQALERGLYDTRRLVFVGFSDGDGPAGPNRQIARKRAAAVREAVVAAA 452
Query: 146 VSSNR---FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++N I + F P+ +D++ GR+ N+R+E+ +
Sbjct: 453 ETANLSRLRIETQAFGEAMPMACDDSEWGRRANRRVEVWV 492
>gi|146985|gb|AAA24233.1| outer membrane protein II [Escherichia vulneris]
Length = 238
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + +TD IG+ + N +S++RA
Sbjct: 120 SDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRIGSEQYNQKLSEKRA 179
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN-------NQRIEIQI 182
+ YL+ + IS RG P+ N D R ++R+ I++
Sbjct: 180 QSVVDYLVAK-GIPANKISARGMGESDPVTGNTCDNVKARAALIDCLAPDRRVAIEV 235
>gi|322832491|ref|YP_004212518.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
gi|321167692|gb|ADW73391.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
Length = 367
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 71/204 (34%), Gaps = 32/204 (15%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKR------------FGSSLDKAEDEFQMQL 58
+ I+G +S + + T + L + + + + L
Sbjct: 67 LAVAITGGPRSSDATSPIPGGGEDPTVQDGEVHKMEQSQGASKRESDDLQRLQQKLEDML 126
Query: 59 QDTG----------IVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
I ++ G I + + +E +L+ IA +L+ F
Sbjct: 127 ASDPRLKDLRPHLMINLTEQGLRIQIIDSKNRPMFQLGSAIVEPYMRDILRAIAPVLDGF 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD + +N +S ERA+ + ++ G+S + + V G
Sbjct: 187 PN-KISLAGHTDDMPYATGERGYSNWELSTERANASRREMMSGGLSEGKVLRVMGMGSSM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
+ N G N+RI I + +
Sbjct: 246 QL-KNH-PAGDAINRRISILVLNK 267
>gi|54296482|ref|YP_122851.1| hypothetical protein lpp0513 [Legionella pneumophila str. Paris]
gi|53750267|emb|CAH11661.1| hypothetical protein lpp0513 [Legionella pneumophila str. Paris]
Length = 189
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 2/140 (1%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIAT 101
+ D + L GI V+ +G IP F + L +L +A
Sbjct: 45 VDGACDATIIKMMTDLNKKGIKVASVGQNYLISIPASALFADQSPRLNWASYSLLNEVAA 104
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
L +F I + S++ ++K ++ R+ V+ YL + +R I +G
Sbjct: 105 FLKQFRKIAITVTSYSSKYVSVKRERALTLARSRVVSEYLWSQ-GVDSRIIFTQGLGSDK 163
Query: 162 PIDTNDTKVGRQNNQRIEIQ 181
PI + R N R+EI
Sbjct: 164 PITSYTLGGDRSPNARVEIT 183
>gi|254441098|ref|ZP_05054591.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198251176|gb|EDY75491.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 226
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 4/164 (2%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIV-NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+GC + + F + ++I A G + + +
Sbjct: 16 TGCTGGTAMQWHDFNTREARSEIDHGDFDHGYFGYATINNSEVQSGQGSLTVNMNRRFSN 75
Query: 75 YIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++F L+ L+ A + +FP + HTD +G+ N + R
Sbjct: 76 EVSAMITFPFNSTALDASARATLRQQANWIRQFPEVRFKVFGHTDLVGSSAYNRRLGLRR 135
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
A+ + YL +G+S +R +V F P+ T+ + N+R
Sbjct: 136 AEAVVLYLSSQGISRSRLEAVVTFGETQPLIV--TEGRERRNRR 177
>gi|118578838|ref|YP_900088.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118501548|gb|ABK98030.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 687
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 1/120 (0%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + + + ++ + ++ I T P ++I HTD+IG+
Sbjct: 562 QTQKKDQNVQEKYALILFDFNKDTVSGLNQEIVNKIVTRFKSLPQASMSIVGHTDNIGSE 621
Query: 124 KNNLLISQERADVIKSYLIQRGV-SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NL +SQ RA + L I G P+ N T GR N+ + I +
Sbjct: 622 SYNLKLSQRRAAAVYKLLTAAYGEPVGERIRFSGVGQGSPLFDNQTPEGRAFNRTVTITL 681
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 40/93 (43%)
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+K+ +L +I L P I + D+ G K +S RA+ +K+YL +
Sbjct: 357 TEKYHQILNIIGKRLADTPGATITLVGCNDNSGAEKGKTGLSTRRAEAVKTYLGTIWNIA 416
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I + ++ ++ G+ N+R+EI
Sbjct: 417 PERIRIEARNLPKMPSSSSSQEGQAENRRVEIV 449
>gi|258545495|ref|ZP_05705729.1| outer membrane protein A (outer membrane protein II)
[Cardiobacterium hominis ATCC 15826]
gi|258519195|gb|EEV88054.1| outer membrane protein A (outer membrane protein II)
[Cardiobacterium hominis ATCC 15826]
Length = 324
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 13/128 (10%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS--TVIAIQSHTDSIGTLKNNLL 128
I + + LQ IA ++ +VI I +TD G N
Sbjct: 196 NIDVSALFKFDRSDYASILPEGKRQLQEIAAAAAQYRDATSVIYIDGYTDPEGKPAYNQR 255
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQN----NQRI 178
+SQ RA +K +I+ + RG P+ T R N+R+
Sbjct: 256 LSQRRAQTVKRVMIEN-GFPAASLKARGHGENDPVVTGCRKRNPRNASARAACDQPNRRV 314
Query: 179 EIQIFPRG 186
EI+++ +
Sbjct: 315 EIKLYGKN 322
>gi|227111637|ref|ZP_03825293.1| outer membrane protein A [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 361
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + TD +G+ + N +S++RA
Sbjct: 234 SDVLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRLGSEQYNQGLSEKRA 293
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + +S RG P+ T D R ++R+EI++
Sbjct: 294 QSVVDYLVAK-GIPANKVSARGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIEV 349
>gi|187921515|ref|YP_001890547.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans
PsJN]
gi|187719953|gb|ACD21176.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 362
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 13/162 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV----SEVFLEKKF 92
+ V+ + F + +
Sbjct: 203 QSAETALQCKQKVQIPVSAPVPVSAPVTVAAANSPRKITLKADSLFSFNGGDDAAILPAG 262
Query: 93 LPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ +A L K PS + I + D +G N +S +RA ++ YL GVS
Sbjct: 263 KRQMNEVAVRLKKLPSVHELKITGYADRLGDKSYNQGLSMQRARTVERYLQSLGVSLP-- 320
Query: 152 ISVRGFAYKYPIDTNDTKVGR------QNNQRIEIQIFPRGN 187
++ +G P+ G N+R+EI++ G+
Sbjct: 321 MTAQGRGSANPLVDCRQSKGDVLTRCLAPNRRVEIELVAAGS 362
>gi|90414986|ref|ZP_01222948.1| hypothetical protein P3TCK_23895 [Photobacterium profundum 3TCK]
gi|90323925|gb|EAS40525.1| hypothetical protein P3TCK_23895 [Photobacterium profundum 3TCK]
Length = 260
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V ++ + ++ L + L+ ATIL + + + HTDS+GT
Sbjct: 118 EVELKEKLLVFMALDNQFALNRAELLPDYQQALRYAATILKRQSHWHLQLTGHTDSLGTS 177
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+N+ + +RA +K +LI++ + I+V +D ++ R N+++E Q+
Sbjct: 178 DSNIQLGMKRASAVKRFLIEQ-GVKSNQIAVFSAGESMAMDDTHSRTQRLANRKVEAQVL 236
>gi|221369495|ref|YP_002520591.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
gi|221162547|gb|ACM03518.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
Length = 254
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 60/162 (37%), Gaps = 4/162 (2%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
AS + + ++ D E + + T + + + +H
Sbjct: 94 TASTDGAPGETGRPVLGLPQGADRLAAADP-PPEGRETAEVTPESFGLLDPALQVNVRIH 152
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+F L P+L + T++ + I HTD+ G+ N +S RA+ ++
Sbjct: 153 FAF-DSAVLASDQTPLLAQLCTVMKASDIRLFQIVGHTDAAGSEAYNQQLSLLRAEEVRR 211
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
YL + + G ++ + +D + G N+R+E Q
Sbjct: 212 YLTGPCGIAPERLRAVGMGERFLTNQSDPRSG--ENRRVEFQ 251
>gi|241205007|ref|YP_002976103.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858897|gb|ACS56564.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 739
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 6/129 (4%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIA 112
L + + + + L+ +A +L K PS
Sbjct: 600 SLDEVKYSARIRDKVRRIDLDTITFATGSADIPMTQARTLRKVADAISQVLEKDPSETFL 659
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD++G+ ++NL++S +RA+ + + L + ++ +G+ Y
Sbjct: 660 IEGHTDAVGSDQSNLILSDQRAESVANVLSDVYGIAPENLATQGYGESYLKVNTSAPE-- 717
Query: 173 QNNQRIEIQ 181
Q N+R+ I+
Sbjct: 718 QENRRVTIR 726
>gi|320577120|gb|ADW54069.1| outer membrane protein A [Sodalis glossinidius]
Length = 290
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + L + + L+ + + +TD IGT + N +SQERA
Sbjct: 183 SDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRIGTEQYNQKLSQERA 242
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN 174
+ SYL+ + + IS RG P+ N ++ GR
Sbjct: 243 QSVVSYLVSK-GIPSDKISARGMGKSNPVTGNTCNSVKGRAA 283
>gi|259417565|ref|ZP_05741484.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259346471|gb|EEW58285.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 517
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 49/161 (30%), Gaps = 13/161 (8%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG--------DMITCYIPVHVSFVSEV 86
+ + + ++ G + D +
Sbjct: 356 AGFVDQAPEYIPMRMQGERLSNAIKSAGDDIPLGELKRMISGLDGLQRLTTSFRFEAGSS 415
Query: 87 FLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS---YL 141
+ + + LIA L + + +D G + N I+ +RA+ ++
Sbjct: 416 RPDAQSRNNIDLIARELEAGVYDGKRMVFVGFSDGEGPAEGNRAIALKRAESVRRAVERA 475
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I + PI +D+ GRQ N+R+E+ +
Sbjct: 476 AETANLDRITIETAAYGEALPIACDDSAWGRQANRRVEVWV 516
>gi|294635647|ref|ZP_06714122.1| outer membrane protein A [Edwardsiella tarda ATCC 23685]
gi|291090994|gb|EFE23555.1| outer membrane protein A [Edwardsiella tarda ATCC 23685]
Length = 356
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + +TD IG+ + NL +S++RA
Sbjct: 229 SDVLFNFNKYTLKAEGRQALDQLYTQLSSMDPKDGSVVVLGYTDRIGSDQYNLKLSKQRA 288
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + I+ RG P+ T D R ++R+ I++
Sbjct: 289 QTVVDYLVSK-GIPADKITARGMGKADPVTGATCDNVKPRAALINCLAPDRRVVIEV 344
>gi|23013133|ref|ZP_00053071.1| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum
MS-1]
Length = 344
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 69/180 (38%), Gaps = 18/180 (10%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMITCYI 76
K + + + + +R DKA++ + ++ ++V + + I
Sbjct: 146 KDRSGMSEQEFKEAQAQREQQKFDKAKEVLEGAMKGIPEMKQFQGSMLVDNTPEGLRIQI 205
Query: 77 PVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLL 128
+ ML L++ ++ + P IAI HTD++ N
Sbjct: 206 TDQEGLAMFPSGSSAPFGHTRAMLDLVSRVVRQLPDNRIAISGHTDAVPFRDPSGYTNWE 265
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+S +RA + LI GV R + G A + P+D D K R N+RI I + ++
Sbjct: 266 LSADRALATRRALIASGVPEGRIDRIVGRADQEPLDKADPKGLR--NRRISIILLRENDL 323
>gi|332561151|ref|ZP_08415469.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
gi|332274949|gb|EGJ20265.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
Length = 254
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 60/162 (37%), Gaps = 4/162 (2%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
AS E + ++ D E + + + + + + +H
Sbjct: 94 TASTESAPGETGRPVLGLPQGADRLAAADP-PPEGRETAEVSPESFGLLDPALQVNVRIH 152
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+F L P+L + T++ + I HTD+ G+ N +S RA+ ++
Sbjct: 153 FAF-DSAVLAADQTPLLAQLCTVMKASDIRLFQIVGHTDAAGSEAYNQQLSLLRAEEVRR 211
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
YL + + G ++ + +D + G N+R+E Q
Sbjct: 212 YLTGPCGIAPERLRAVGMGERFLTNQSDPRSG--ENRRVEFQ 251
>gi|228469693|ref|ZP_04054661.1| immunogenic 75 kDa protein PG4 [Porphyromonas uenonis 60-3]
gi|228308712|gb|EEK17438.1| immunogenic 75 kDa protein PG4 [Porphyromonas uenonis 60-3]
Length = 559
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 46/136 (33%), Gaps = 28/136 (20%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I L + L + T+L + P + + S+TD G+ + N +SQ RA
Sbjct: 424 QIHDIYYDFDRASLRLEGKKSLDYLVTLLEQNPDVRLELSSNTDRKGSQRYNKRLSQRRA 483
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-----------------------TKV- 170
+ +YLI + + + RG+ + P T+
Sbjct: 484 QSVVNYLIAK-GIAADRLEARGYGKERPYVVTKGMATRFDWLPEGQELTAEWVGALTEEQ 542
Query: 171 ---GRQNNQRIEIQIF 183
Q N+R E +
Sbjct: 543 QVVCDQLNRRTEFTVI 558
>gi|213967914|ref|ZP_03396060.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato T1]
gi|213927257|gb|EEB60806.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato T1]
Length = 341
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 63/178 (35%), Gaps = 15/178 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ + +R L + +++ + Q I+ D +
Sbjct: 98 SPDTVPIEAETSETKAEAVEQERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NL 127
I + L+ F +L +A + P+ I+I HTD+ + N N
Sbjct: 158 IMDADNRPMFDSGSARLKPYFEGILLALADTIRSVPN-KISISGHTDATPFVGNNGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S RA+ + L+ ++ V G+A + + N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDRENPTN-PVNRRIDIVVLTK 272
>gi|46398709|gb|AAS92040.1| IcmN protein [Legionella pneumophila]
Length = 175
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 2/140 (1%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIAT 101
+ D + L GI V+ +G IP F + L +L IA
Sbjct: 31 VDGACDATIIKMMTDLNKKGIKVASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAA 90
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
L +F I + S++ ++K ++ R+ V+ YL + +R I +G
Sbjct: 91 FLKQFRKIAITVTSYSSKYVSVKRERALTLARSRVVSEYLWSQ-GVDSRIIFTQGLGSDK 149
Query: 162 PIDTNDTKVGRQNNQRIEIQ 181
PI + R N R+EI
Sbjct: 150 PITSYTLGGDRSPNARVEIT 169
>gi|308050006|ref|YP_003913572.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307632196|gb|ADN76498.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 328
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 59/171 (34%), Gaps = 7/171 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY- 75
G + L +T + K + + I V G I
Sbjct: 120 GASAGQGDTLTSLLPGPVETQAQLEVLAREAGKIIAQ-SEIADNVAIQVVPQGLKILIRD 178
Query: 76 -IPVHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + + F +L +A +L + P V T +N +S E
Sbjct: 179 NLQQFMFARGSSRMTPYFEDLLFSLAPLLKQVQNPLMVSGHTDSTHFRSNDSSNWELSSE 238
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + L GV N+F +V G A + P++ +D + N+RIE+ +
Sbjct: 239 RALEARRALEFGGVGRNQFFNVVGMADQVPVEPSDPRS--SANRRIELMVL 287
>gi|85710723|ref|ZP_01041787.1| probable peptidoglycan-associated lipoprotein precursor
[Erythrobacter sp. NAP1]
gi|85687901|gb|EAQ27906.1| probable peptidoglycan-associated lipoprotein precursor
[Erythrobacter sp. NAP1]
Length = 210
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 50/179 (27%), Gaps = 15/179 (8%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
M + C + E+ + + + +
Sbjct: 45 TVALMTSALALGACSKKAPEELPPAPVSTPTPAPAPAPTAPTGPVPGTQGHFEAAVGSSS 104
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V ++ LQ A +FP I+ H D GT +
Sbjct: 105 V-------------IYFDTDRFNIDSTDAAALQAQAQYFARFPQLTFTIEGHCDERGTRE 151
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR-IEIQI 182
NL + + RA+ K+YL+ S I + + P+ T N+R I I
Sbjct: 152 YNLALGERRANAAKNYLVSL-GVSPNRIRTVSYGKERPVALASTPAAWSQNRRAASIII 209
>gi|254495834|ref|ZP_05108746.1| IcmN (DotK) [Legionella drancourtii LLAP12]
gi|254354991|gb|EET13614.1| IcmN (DotK) [Legionella drancourtii LLAP12]
Length = 189
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 71/186 (38%), Gaps = 9/186 (4%)
Query: 2 IKELG---LSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
++ + + + + I+ C + S + L + + D + ++
Sbjct: 1 MRSVFTNYIVLLRRAVGLIALCFIVSCSRDYYALPPEV--PKWPCKVTGACDASIIKYIK 58
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+L+ G+ V IG IP F + ++ K +L +A + +F I I S
Sbjct: 59 KLRKKGVTVVTIGQDYMISIPAAYLFEPQTPHIKWKAYKLLNEVAIFIKQFRKISIYIDS 118
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
++ + + ++ R+ ++ YL + +RFI +G PI N
Sbjct: 119 YSSKYVSPQREHALTLARSRIVSEYLWSQ-GVDSRFIFTQGLGSDKPIIAYTPGGDYSAN 177
Query: 176 QRIEIQ 181
R+EI+
Sbjct: 178 ARVEIK 183
>gi|153849251|ref|ZP_01994008.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|149744658|gb|EDM56126.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
Length = 160
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 2/136 (1%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCY 75
G ++E++K L + G D+ E E + L ++G+ V R+G + +
Sbjct: 3 ATGDNAKERRKHALIGAAAGGATGAGVGYYFDQQEAELRRALLNSGVQVQRVGENQLLLR 62
Query: 76 IPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + F S + L+ L+ +A IL ++P T + I + +SI K + +
Sbjct: 63 MENGIGFSSSSYQLDASIHNTLRGVARILVEYPDTSLVIDGNGNSISYEKGRGVPDDQGE 122
Query: 135 DVIKSYLIQRGVSSNR 150
NR
Sbjct: 123 LEAAFTGNHGWFFRNR 138
>gi|83311678|ref|YP_421942.1| flagellar motor protein [Magnetospirillum magneticum AMB-1]
gi|82946519|dbj|BAE51383.1| Flagellar motor protein [Magnetospirillum magneticum AMB-1]
Length = 344
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 68/179 (37%), Gaps = 18/179 (10%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMITCYIP 77
+ + + + +R DKA++ + ++ ++V + + I
Sbjct: 147 DRSGMSEQEFKEAQAQREQQKFDKAKEVLEGAMKGIPEMKQFQGSMLVDNTPEGLRIQIT 206
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
+ ML L++ ++ + P IAI HTD+I N +
Sbjct: 207 DQEGLAMFPSGSSAPYGHTRAMLDLVSRVVRQLPDNRIAISGHTDAIPFRDPSGYTNWEL 266
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
S +RA + LI GV R + G A + P+D D K R N+RI I + ++
Sbjct: 267 SADRALATRRALIASGVPEGRIDRIVGRADQEPLDKADPKGLR--NRRISIILLRENDV 323
>gi|85859515|ref|YP_461717.1| OmpA family outer membrane protein [Syntrophus aciditrophicus SB]
gi|85722606|gb|ABC77549.1| outer membrane protein A protein family [Syntrophus aciditrophicus
SB]
Length = 226
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 59/163 (36%), Gaps = 10/163 (6%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ + + + G +K + + + ++ +P
Sbjct: 71 KPRTPALAVRVPEATASITADGPPTEKQTVSAKAGNNSSAVDITGSNRPDHVCVPTIYFR 130
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPS--TVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + L + + L + P + + HT +G+ N +S RA+ + Y
Sbjct: 131 FNRFDVSNYEKDQLDRLVSRLKERPDRPRELRVVGHTCDLGSHPYNDHLSLMRAESVAVY 190
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L + G + +G + P+ +KVG+ N+R+EI+I
Sbjct: 191 LGRNGFKVS---EAKGEGKRSPV----SKVGK-LNRRVEIEII 225
>gi|262171113|ref|ZP_06038791.1| outer membrane protein [Vibrio mimicus MB-451]
gi|261892189|gb|EEY38175.1| outer membrane protein [Vibrio mimicus MB-451]
Length = 278
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 52/148 (35%), Gaps = 12/148 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + T V + + + ++ + K++
Sbjct: 114 LNQLEQQLDYVTSQTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQFAINSTEINPKYMGN 173
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + A L +++ H DS G + N ++ RA+ +K + + I+
Sbjct: 174 LAIAADKLKARQDLTLSVTGHADSSGNSEFNEKLAMGRAEQVKR-YLTIFGLAPERITTH 232
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
P+ +T + N+R+ I+I
Sbjct: 233 SLGESLPLYVGETPGVKLTNRRVSIEII 260
>gi|254464865|ref|ZP_05078276.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
gi|206685773|gb|EDZ46255.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
Length = 517
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 60/149 (40%), Gaps = 8/149 (5%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
RF +++ AE E ++ + V +T + + ++
Sbjct: 371 QGSRFANAILAAEGEAGLEELQRLVTVLGGMRRLTASFR---FEPGSARPDAQSRSNIEQ 427
Query: 99 IATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG---VSSNRFIS 153
+A L +F + I +D +G + N I+ +RA ++ +++ S I
Sbjct: 428 LARALEAGEFDAKEIVFAGFSDGVGPAEGNRQIALKRAGAVRDAVVKAAETADISRVRIR 487
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
GF P+ +D+ GRQ N+R+E+ +
Sbjct: 488 TEGFGEALPMACDDSAWGRQINRRVEVWV 516
>gi|116252498|ref|YP_768336.1| OmpA family protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115257146|emb|CAK08241.1| putative OmpA family protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 729
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 6/129 (4%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIA 112
L + + + + L+ +A +L K PS
Sbjct: 590 SLDEVKYSARIRDKVRRIDLDTITFATGSADIPMTQARTLRKVADAISQVLEKDPSETFL 649
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD++G+ ++NL++S +RA+ + + L + ++ +G+ Y
Sbjct: 650 IEGHTDAVGSDQSNLILSDQRAESVANVLSDVYGIAPENLATQGYGESYLKVNTSAPE-- 707
Query: 173 QNNQRIEIQ 181
Q N+R+ I+
Sbjct: 708 QENRRVTIR 716
>gi|46398691|gb|AAS92031.1| IcmN protein [Legionella pneumophila]
Length = 189
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 2/140 (1%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIAT 101
+ D + L GI V+ +G IP F + L +L IA
Sbjct: 45 VDGACDATIIKMMTDLNKKGIKVASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAA 104
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
L +F I + S++ ++K ++ R+ V+ YL + +R I +G
Sbjct: 105 FLKQFRKIAITVTSYSSKYVSVKRERALTLARSRVVSEYLWSQ-GVDSRIIFTQGLGSDK 163
Query: 162 PIDTNDTKVGRQNNQRIEIQ 181
PI + R N R+EI
Sbjct: 164 PITSYTLGGDRSPNARVEIT 183
>gi|37704656|gb|AAR01600.1| OprF [Pseudomonas sp. MFY146]
Length = 297
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++LP ++ +A + ++P+T + +TDS+GT NL +SQ RAD +
Sbjct: 212 DVKFDFDKAVVKSQYLPDIKNVAQFMQQYPATSTTVNGYTDSVGTDAYNLKLSQRRADSV 271
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPID 164
+ L+Q+GVS +R +V G P+
Sbjct: 272 RQALVQQGVSPSRVDAV-GHGKSDPVA 297
>gi|149377601|ref|ZP_01895340.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
gi|149358143|gb|EDM46626.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
Length = 148
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 56/131 (42%), Gaps = 7/131 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFV---SEVFLEKKFLPMLQLIATILNKFPSTV 110
++G+ + + T P + F ++ L+++ L +L+ A L P
Sbjct: 12 LARAAIESGLPMPSLASDSTPRKPHRLRFHYGFNKHRLDEQDLAILRQHALYLRHNPGVT 71
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ I H D+ G + N +S+ RA LI+ GV ++ + V G+ P+
Sbjct: 72 VRIHGHADNFGVSEYNHFLSRLRASSAAKVLIREGVRESQVL-VSGWGSDRPLAR---PE 127
Query: 171 GRQNNQRIEIQ 181
N+R+E++
Sbjct: 128 DHAANRRLELE 138
>gi|94497343|ref|ZP_01303914.1| OmpA/MotB [Sphingomonas sp. SKA58]
gi|94423206|gb|EAT08236.1| OmpA/MotB [Sphingomonas sp. SKA58]
Length = 358
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + +L + + S + + H D G+ N+ +SQ RAD +K
Sbjct: 250 VFFEWDKSDITPDAATILDNAVSAYSSCGSAQVMLAGHADKSGSASYNVGLSQRRADSVK 309
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+YL + + ++ F P V N+R+EI
Sbjct: 310 AYLASK-GIPDGVMTTEAFGESRPRVETADGVREVQNRRVEIT 351
>gi|325286038|ref|YP_004261828.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324321492|gb|ADY28957.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 305
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
L + + I+T L+K + + HTD+ G N+ + +RA+ K +
Sbjct: 210 NLTAEQRQKIADISTYLDKVEGAMCNVVGHTDNTGDRTTNIGLGLKRAEFAKE-YLTNNG 268
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S I+ PI TNDT+ G+ N+R I +
Sbjct: 269 ISPSKINTSSKGPDEPIATNDTEEGKAQNRRTVITL 304
>gi|329755866|gb|AEC04330.1| outer membrane protein A [Pasteurella multocida]
Length = 359
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 12/137 (8%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + + L+ +L I + + S +A+ +TD
Sbjct: 225 GQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDR 284
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR----- 172
+G+ NL +SQ RAD + +YL+ + + IS G P+ N D+ GR
Sbjct: 285 LGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISATGHGEANPVTGNKCDSVKGRKALIA 343
Query: 173 --QNNQRIEIQIFPRGN 187
+++ +EI + +GN
Sbjct: 344 CLADDRPVEIAV--KGN 358
>gi|329755840|gb|AEC04317.1| outer membrane protein A [Pasteurella multocida]
gi|329755846|gb|AEC04320.1| outer membrane protein A [Pasteurella multocida]
gi|329755854|gb|AEC04324.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 12/137 (8%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + + L+ +L I + + S +A+ +TD
Sbjct: 224 GQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDR 283
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGR----- 172
+G+ NL +SQ RAD + +YL+ + + IS G P+ N D+ GR
Sbjct: 284 LGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISATGHGEANPVTGNKCDSVKGRKALIA 342
Query: 173 --QNNQRIEIQIFPRGN 187
+++ +EI + +GN
Sbjct: 343 CLADDRPVEIAV--KGN 357
>gi|262396480|ref|YP_003288333.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp.
Ex25]
gi|262340074|gb|ACY53868.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp.
Ex25]
Length = 339
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L +K L + + ++ T I I HTD++G+ NL +S+ RA+ +
Sbjct: 211 FDFGQKVLSRKQQETLAALNSYVSVDDRVTKILIDGHTDNVGSSLANLSVSRTRAEQVAE 270
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
L++ I R +YPI +N++ G+ N+R+ +++ R N +
Sbjct: 271 ALVEL-GIDKSMIETRAHGSRYPIASNNSTKGQAKNRRVTLRLV-RDNER 318
>gi|225011410|ref|ZP_03701848.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
gi|225003913|gb|EEG41885.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
Length = 370
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 84 SEVFLEKKFLPMLQL-IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
L K ++ I + + ++ I SHTDS GT N+ +S+ RA + YLI
Sbjct: 266 GSAALTSKSTKIIDEYILARMKADKNILVEIGSHTDSRGTDSLNMSLSERRAKSVVEYLI 325
Query: 143 QRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQI 182
+G++ R I G+ ++ + ++ NN+R E ++
Sbjct: 326 SKGINKQRLI-AEGYGEDKLLNDCENGVDCSESLHANNRRTEFKV 369
>gi|209549648|ref|YP_002281565.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209535404|gb|ACI55339.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 742
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 6/129 (4%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIA 112
L + + + + L+ +A +L K PS
Sbjct: 603 SLDEVKYSARIRDKVRRIDLDTITFATGSADIPMTQARTLRKVADAISQVLKKDPSETFL 662
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD++GT ++NL++S +RA+ + + L ++ +G+ +Y
Sbjct: 663 IEGHTDAVGTDQSNLVLSDQRAESVANVLSDVYGIPPENLATQGYGEQYLKVNTSGPE-- 720
Query: 173 QNNQRIEIQ 181
Q N+R+ ++
Sbjct: 721 QENRRVTVR 729
>gi|308050648|ref|YP_003914214.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307632838|gb|ADN77140.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 166
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 3/103 (2%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
L + +A + + + + H DS G+L +N + RA +
Sbjct: 56 YFDTDSARLRPEHH---DQLAVFVGDGVAGRVRVVGHADSRGSLAHNQDLGGRRALAVSK 112
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L +R I + P N T+ G+ N+R+E+ I
Sbjct: 113 ALSERYGVDASQIQRQSLGETLPWRDNLTETGQTLNRRVELWI 155
>gi|119898879|ref|YP_934092.1| outer membrane protein A [Azoarcus sp. BH72]
gi|119671292|emb|CAL95205.1| outer membrane protein A precursor [Azoarcus sp. BH72]
Length = 238
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 11/124 (8%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D I + + L+ + L +A VI HTD +G+ N
Sbjct: 114 ADKIKLSA-DTLFDFDKAVLKPEGRTKLDDLAAKAKGIKLEVILAVGHTDRLGSDSYNQK 172
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIE 179
+S+ RA +K+YL+ + + G K P+ N Q ++R+E
Sbjct: 173 LSERRAAAVKTYLVSK-GVEANRVYTEGKGEKQPVTGNKCDSVKNRKALIECLQPDRRVE 231
Query: 180 IQIF 183
+++
Sbjct: 232 VEVI 235
>gi|33593045|ref|NP_880689.1| putative lipoprotein [Bordetella pertussis Tohama I]
gi|33563420|emb|CAE42299.1| putative lipoprotein [Bordetella pertussis Tohama I]
gi|332382458|gb|AEE67305.1| putative lipoprotein [Bordetella pertussis CS]
Length = 182
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 7/154 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD-----TGIVVSRIGDMIT 73
+A K + T + K S D + Q+ G+ V + D +T
Sbjct: 23 SMAQEPPYKSTILGLQATILDLKGLPSDTDGGISDLSAQVGALAARHEGVSVRQGKDAVT 82
Query: 74 CYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ V F + + P L+ IA ++ + ++AI+ HTDS G+ N +S
Sbjct: 83 IAMMGDVLFDFDKADILAAAEPTLRDIAELIKSPATGIVAIEGHTDSKGSDSYNKGLSLR 142
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
RA + + +SVRG P+ N
Sbjct: 143 RAQAVAQ-WLGAHGVDAAKLSVRGLGAARPVQPN 175
>gi|330901956|gb|EGH33293.1| flagellar motor protein MotB [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 302
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 59/178 (33%), Gaps = 15/178 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ + +R L + + + + Q I+ D +
Sbjct: 98 SPDTVPIEAENAETKAEAVEQERLEMLLQELQTKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNL 127
I + L+ F +L +A + P+ ++I HTD+ N
Sbjct: 158 IMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN-KVSISGHTDATPFVGSGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S RA+ + L+ ++ V G+A + N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDRQNPTN-PINRRIDIVVLTK 272
>gi|319952777|ref|YP_004164044.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319421437|gb|ADV48546.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 301
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV--FLEKKFLPMLQLIATILNKFPSTV 110
F + +D + + D I V E L + I+ L+K
Sbjct: 170 AFSNEHEDLEEEMKALYDKIKADPLVLYFNTGEAAITLTVSERQKIAAISKYLDKIEGAN 229
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
++ HTDS G N+ + QERAD K YL + G+ +++ I+ PI TNDT
Sbjct: 230 CSVVGHTDSQGNRITNIGLGQERADFAKQYLSENGILASKIIATS-KGPDTPIATNDTDE 288
Query: 171 GRQNNQRIEIQI 182
GR N+R I +
Sbjct: 289 GRSQNRRTVITL 300
>gi|311745704|ref|ZP_07719489.1| putative OmpA family protein [Algoriphagus sp. PR1]
gi|126575146|gb|EAZ79496.1| putative OmpA family protein [Algoriphagus sp. PR1]
Length = 430
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 50/125 (40%), Gaps = 2/125 (1%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+++T V + I +A L K P + I+ +
Sbjct: 307 IKETVQQVDYFKEAINEGYVNVYYAFDSSKPLAYSASAADYVANFLKKNPGVSVEIKGYA 366
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D +G+ N+ +S++RA + LI G+ ++R +S +G+ + + RQ +R
Sbjct: 367 DELGSEDYNIQLSEKRAKAVYDLLIATGIDASR-LSFKGYGEDTSV-DKSSADARQMARR 424
Query: 178 IEIQI 182
+ ++
Sbjct: 425 VSFEV 429
>gi|46398703|gb|AAS92037.1| IcmN protein [Legionella pneumophila]
Length = 165
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 2/140 (1%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIAT 101
+ D + L GI V+ +G IP F + L +L IA
Sbjct: 21 VDGACDATIIKMMTDLNKKGIKVASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAA 80
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
L +F I + S++ ++K ++ R+ V+ YL + +R I +G
Sbjct: 81 FLKQFRKIAITVTSYSSKYVSVKRERALTLARSRVVSEYLWSQ-GVDSRIIFTQGLGSDK 139
Query: 162 PIDTNDTKVGRQNNQRIEIQ 181
PI + R N R+EI
Sbjct: 140 PITSYTLGGDRSPNARVEIT 159
>gi|296534740|ref|ZP_06897115.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957]
gi|296264932|gb|EFH11182.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957]
Length = 97
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L + ++ A ++ +T I + H D G+ + N +SQ RAD + + L+++
Sbjct: 1 ADLTDRARQIISEAAQNSSRTQTTRIEVAGHADRSGSPQYNQRLSQRRADAVAAELVRQ- 59
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S I+V+ F P+ V N+R+EI +
Sbjct: 60 GVSRSAITVQAFGESRPLVPTADGVREPQNRRVEIVL 96
>gi|258625023|ref|ZP_05719945.1| Outer membrane protein [Vibrio mimicus VM603]
gi|258582691|gb|EEW07518.1| Outer membrane protein [Vibrio mimicus VM603]
Length = 278
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 52/148 (35%), Gaps = 12/148 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIP-----------VHVSFVSEVFLEKKFLPM 95
L++ E + T V + + + ++ + K++
Sbjct: 114 LNQLEQQLDYVTSQTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQFAINSTEINPKYMGN 173
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + A L +++ H DS G + N ++ RA+ +K + + I+
Sbjct: 174 LAIAADKLKARQDLTLSVTGHADSSGNSEFNEKLAMGRAEQVKR-YLTIFGLAPERITTH 232
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
P+ +T + N+R+ I+I
Sbjct: 233 SLGESLPLYVGETPGVKLTNRRVSIEII 260
>gi|315122875|ref|YP_004063364.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313496277|gb|ADR52876.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 152
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 44/115 (38%), Gaps = 3/115 (2%)
Query: 69 GDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + F + + + + +L + + L K I+ HTD GT ++L
Sbjct: 33 QQQFAQSVSDRIFFDINSYSIRPEDIQVLSSLGSWLEKN-GCDFIIEGHTDEQGTRNSSL 91
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ RA + Y + R ++ + + + + P + N+R I +
Sbjct: 92 VLGLRRAHTVFDYFLAR-GINSSRMKITSYGKEIPAVLGYDESAYSKNRRTVIVL 145
>gi|310819072|ref|YP_003951430.1| outer membrane domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309392144|gb|ADO69603.1| Outer membrane domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 480
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 12/145 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ G + DK + + + + GD L +P+L +
Sbjct: 332 EPAGPAEDKPAEPIRPYVPTPQEKLVLRGD--------IHFVRGSSEL-PGVVPLLDQVI 382
Query: 101 TILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
L+ F I I+ H D+ GT +++ +S RA ++ YLI + + +RG
Sbjct: 383 LQLSGFSAGGTIVIEGHADTEGTDTSDMFMSLRRAQAVRRYLIDQ-GVPGTKVRIRGLGS 441
Query: 160 KYPIDTN-DTKVGRQNNQRIEIQIF 183
+P+ + T+ Q N+R E+ +
Sbjct: 442 HWPVSSKPATEQEHQLNRRAEVLVL 466
>gi|254786950|ref|YP_003074379.1| OmpA/MotB domain-containing protein [Teredinibacter turnerae T7901]
gi|237683752|gb|ACR11016.1| OmpA/MotB domain protein [Teredinibacter turnerae T7901]
Length = 311
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L + L I ++ + I +H + GT +NL +S+ RAD+++ YL+
Sbjct: 192 KLSRAATQKLDQIILLVKHDKAINQFIIDAHASAEGTRIDNLELSKTRADLVRDYLVG-H 250
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ VR +YP+ +ND+ GR N+R+ ++
Sbjct: 251 GIPESQLVVRWHGERYPVASNDSSSGRAKNRRVTVR 286
>gi|124006521|ref|ZP_01691354.1| fibronectin-binding protein, putative [Microscilla marina ATCC
23134]
gi|123987934|gb|EAY27614.1| fibronectin-binding protein, putative [Microscilla marina ATCC
23134]
Length = 130
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+++ K + + + I+I SHTD+IG + N +S+ R++ +
Sbjct: 22 SIYFGGGSYYIDAKQKRNIVKVIKQIKDLSKYQISITSHTDNIGGKEYNEWLSKMRSNAV 81
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
LI+ + + + ++ F P+ TND+ GR N+R+++ P
Sbjct: 82 LKQLIEHQIKKGKVL-IKDFGQDNPMYTNDSHNGRIRNRRVDLLFSP 127
>gi|115372572|ref|ZP_01459880.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|115370534|gb|EAU69461.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
Length = 490
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 12/145 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ G + DK + + + + GD L +P+L +
Sbjct: 342 EPAGPAEDKPAEPIRPYVPTPQEKLVLRGD--------IHFVRGSSEL-PGVVPLLDQVI 392
Query: 101 TILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
L+ F I I+ H D+ GT +++ +S RA ++ YLI + + +RG
Sbjct: 393 LQLSGFSAGGTIVIEGHADTEGTDTSDMFMSLRRAQAVRRYLIDQ-GVPGTKVRIRGLGS 451
Query: 160 KYPIDTN-DTKVGRQNNQRIEIQIF 183
+P+ + T+ Q N+R E+ +
Sbjct: 452 HWPVSSKPATEQEHQLNRRAEVLVL 476
>gi|46398715|gb|AAS92043.1| IcmN protein [Legionella pneumophila]
Length = 176
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 2/125 (1%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L GI V+ +G IP F + L +L +A L +F I + S+
Sbjct: 47 LNKKGIKVASVGQNYLISIPASALFADQSPRLNWASYSLLNEVAAFLKQFRKIAITVTSY 106
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+ ++K ++ R+ V+ YL + +R I +G PI + R N
Sbjct: 107 SSKYVSVKRERALTLARSRVVSEYLWSQ-GVDSRIIFTQGLGSDKPITSYTLGGDRSPNA 165
Query: 177 RIEIQ 181
R+EI
Sbjct: 166 RVEIT 170
>gi|42524415|ref|NP_969795.1| flagellar motor protein MotB [Bdellovibrio bacteriovorus HD100]
gi|39576624|emb|CAE80788.1| flagellar motor protein MotB [Bdellovibrio bacteriovorus HD100]
Length = 319
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 73/197 (37%), Gaps = 20/197 (10%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK--AEDEFQMQLQDTG- 62
+++ + ++ + K L + AE + L+ +G
Sbjct: 33 MMTLLFGFFVLMYSMSRFDNTKFDLVRKEVAKYFGGNIKEVSAALLAEQKIMNILKGSGD 92
Query: 63 ---IVVSRIGDM-ITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPST-VIAIQSH 116
+ + + G+ + V F S +++ P L+ + + L IA++ H
Sbjct: 93 LNGVEIIKDGNNTLLLKFDGEVLFDSGAVEVKETAKPNLRRVVSALRSIEGVNKIAVEGH 152
Query: 117 TDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG- 171
TDS G +K+N +S RA + Y + ++ +S GF +P+ K G
Sbjct: 153 TDSDAIQSGLVKSNWELSSLRASSVVRYF-EESGVDSKLLSAAGFGSSHPLAPEVDKAGV 211
Query: 172 -----RQNNQRIEIQIF 183
+ N+R+ + +
Sbjct: 212 SIPANKVLNRRVVVAVT 228
>gi|328947792|ref|YP_004365129.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
gi|328448116|gb|AEB13832.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
Length = 1053
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 60/152 (39%), Gaps = 34/152 (22%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVF-----LEKKFL---------------PMLQLIATI 102
++V R GD + IP + +E ++ +L+ ++ I
Sbjct: 902 VLVVRDGDKLKMQIPSIIFRSNEADFGVRTVDSNGKIIKAGITQAQADNNARVLKRVSEI 961
Query: 103 LNKFPSTVIAIQSHTDSIG-----------TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
L KF + I H + I K + +S++RA+ +KS L+ + ++
Sbjct: 962 LKKFKDYKVTIVGHANRISDNSAEETEEGVWGKALISLSEQRAEYVKSQLV-KFGINSSR 1020
Query: 152 ISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQI 182
+SV G P+ DT V N+R+E +
Sbjct: 1021 LSVEGKGGTEPVADRKDTNVNW-KNRRVEFIL 1051
>gi|332967831|gb|EGK06930.1| OmpA family protein [Kingella kingae ATCC 23330]
Length = 227
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 79/216 (36%), Gaps = 36/216 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-----SSLDKAEDEFQ 55
M K++ LS I+ ++ G + + + ++V FG + L+KAE+
Sbjct: 1 MTKQVKLSALIVALMASTGAMAHD-IHGYTTSQGSGEVVRNNFGECWENNYLNKAENGLV 59
Query: 56 M--------QLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
+ + T + F + L + + L + +N
Sbjct: 60 ECGDREAAAPAPAPAPRMETVEQNETVSFGSNFLFGFDKDKLRPEAVETLNQLVARVNGT 119
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP---- 162
+ ++ HTD +G + N +S+ RA + +YL+ +GV + R +S G
Sbjct: 120 NVQAVRVEGHTDFMGAEQYNQALSERRATAVANYLVSQGVPAER-VSAVGLGESQARMTE 178
Query: 163 -----IDTNDTKVGRQN-----------NQRIEIQI 182
+ +V R ++R+++QI
Sbjct: 179 SCQAEVAKLGNRVSRAKKRAALIACIEPDRRVDVQI 214
>gi|157375630|ref|YP_001474230.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157318004|gb|ABV37102.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
Length = 245
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/170 (13%), Positives = 65/170 (38%), Gaps = 11/170 (6%)
Query: 23 REKKKVFLHKSNDTDIVNK-----RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
++ ++ + +S + ++ + D A+ E + ++ + +
Sbjct: 76 SQQAQLAMQESKMNQLSDENRSLMAISNRYDSAQHELAQLKAEDQQKLAELSLGLNVQ-- 133
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L F L +A ++ P + + + D G N +S++R +
Sbjct: 134 ---FKTGSSELVPHFKLQLDEVAYAMSLSPELRLDLTGYADRRGDSTYNQALSEQRVAEV 190
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
K+YL+ +G+ +R + R + P+ + ++R+ +++ G+
Sbjct: 191 KTYLVNQGIDESR-LDFRAYGASAPMTEEQSFENDFFDRRVTVKLLSTGS 239
>gi|251733503|emb|CAR82501.1| pal [Ensifer adhaerens]
Length = 87
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L K+P+ + ++ H D GT + NL + RA K YLI
Sbjct: 2 DSTSIRADAQQTLDRQAQWLAKYPNYAVTVEGHADERGTREYNLALGARRAASTKDYLIS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RGV +NR ++ + + P+ D
Sbjct: 62 RGVPANRLKTIS-YGKEKPVAVCDD 85
>gi|46398689|gb|AAS92030.1| IcmN protein [Legionella pneumophila]
Length = 189
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 2/140 (1%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIAT 101
+ D + L GI V+ +G IP F + L +L IA
Sbjct: 45 VDGACDATIIKMMTDLNKKGIKVASVGQNDLISIPASALFXDQSPRLNWASYSLLNEIAA 104
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
L +F I + S++ ++K ++ R+ V+ YL + +R I +G
Sbjct: 105 FLKQFRKIAITVTSYSSKYVSVKRERALTLARSRVVSEYLWSQ-GVDSRIIFTQGLGSDK 163
Query: 162 PIDTNDTKVGRQNNQRIEIQ 181
PI + R N R+EI
Sbjct: 164 PITSYTLGGDRSPNARVEIT 183
>gi|330825361|ref|YP_004388664.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
K601]
gi|329310733|gb|AEB85148.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
Length = 234
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 6/173 (3%)
Query: 13 TTISGC---GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV-SRI 68
+ C R K + T + A+ E + V ++
Sbjct: 55 AAFALCRGDACPQRTPKTLAPVAVQSTAPAAPATPALPRNADVELEESAPPPIASVPAKA 114
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + L L+ +A L + ++ I + TDS G N
Sbjct: 115 PEPPAFEQVAVHFPFASAQLGPSARAALREVAPRLAQ--ASEITLSGRTDSTGPAATNDG 172
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+++ RA + L+ + +SV ++ND+ GR NN+R+EI+
Sbjct: 173 LAKARAQAVLRQLLALSPAIAAHVSVDAQGTCCYAESNDSPAGRANNRRVEIR 225
>gi|163786724|ref|ZP_02181172.1| hypothetical protein FBALC1_16102 [Flavobacteriales bacterium
ALC-1]
gi|159878584|gb|EDP72640.1| hypothetical protein FBALC1_16102 [Flavobacteriales bacterium
ALC-1]
Length = 308
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
L + + I+ ++K + + HTD+ G N+ + Q+RAD + R
Sbjct: 214 NLTAEQRQKIADISRCVDKL-GVKVQVVGHTDNTGDADTNMTLGQDRADFA-KGYLVRNG 271
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + PI N T G+ N+R I I
Sbjct: 272 ILSDNVEATSKGQTEPIADNATDEGKAKNRRTVITI 307
>gi|315127493|ref|YP_004069496.1| hypothetical protein PSM_A2431 [Pseudoalteromonas sp. SM9913]
gi|315016007|gb|ADT69345.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
Length = 241
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 64/179 (35%), Gaps = 10/179 (5%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS-------LDKAEDEFQMQLQDTG 62
+ +G + + + + + V + E + L
Sbjct: 52 AFVGAFAGGLIGDAKVAEQTIAEQQQALTVMAEKTNDYQHVLNHNSHLEAQL-ELLAQQN 110
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+++ + V + F L + +L P + + D G
Sbjct: 111 EQLTQSQLNNLLAMTVQ-FKTGSSDIAPHFAKQLDQLVALLKSQPQLALDLSGFADQRGE 169
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ NLL+S+ R + ++SYLI++GVS R +S + F + I ++T ++R+ +
Sbjct: 170 EQANLLLSKARVNAVQSYLIKQGVSHTR-LSAQAFGEQQSIANSNTLEDNFFDRRVTLT 227
>gi|283798975|ref|ZP_06348128.1| outer membrane protein [Clostridium sp. M62/1]
gi|291073265|gb|EFE10629.1| outer membrane protein [Clostridium sp. M62/1]
Length = 294
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 40/113 (35%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
G ++ +D+ I ++ + + L + +L
Sbjct: 182 ADKDDDGDGVNNCDDKCPNSQAGQTIGPDGCPVPVSIDLKGVNFDFDKATLRPDAVAILN 241
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
A IL + PS + + HTD G N +S+ RA + +L GV + R
Sbjct: 242 EAAEILKRNPSLRVEVAGHTDLCGKDAYNQKLSERRAKAVYDFLTSNGVDAGR 294
>gi|315453529|ref|YP_004073799.1| putative flagellar motor protein [Helicobacter felis ATCC 49179]
gi|315132581|emb|CBY83209.1| putative flagellar motor protein [Helicobacter felis ATCC 49179]
Length = 253
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 56/208 (26%), Gaps = 33/208 (15%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFL-----------------------HKSNDTDIVNKR 42
LS+ + I+ ++ K KV
Sbjct: 23 FLSLLLALFIALYAISVVNKAKVKALKKEFLKIFDYAPIPDSFQPVIPIPPAPGGRQEDT 82
Query: 43 FGSSLDKAEDEFQMQLQ---DTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPMLQ 97
+ G V+ + +P + F + +
Sbjct: 83 IEERESTQQSNPSQTTIKKIGEGSVLEQTDQGSVLKLPSSLIFTEPYGDTINATMQEYIG 142
Query: 98 LIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR----GVSSNRFI 152
IA+I+ P I ++ +TD+ + ++ + R + + +
Sbjct: 143 RIASIIRALPSQVQINVRGYTDNTPIPAHIPFKDHYALAASRASKVMRELIADGINPQKL 202
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
S + PI ND+ R N R+EI
Sbjct: 203 SFTSYGANNPIVPNDSIENRMRNNRVEI 230
>gi|316931816|ref|YP_004106798.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315599530|gb|ADU42065.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
Length = 334
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + LQ+IA LN+ P V I+ HTD++G +NL +
Sbjct: 201 IDLNTINFDTGSWDIPPDQAAKLQVIADGLNRAIQRNPREVFLIEGHTDAVGNDTDNLSL 260
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA+ + L Q+ ++ +G+ +Y +T+ + N+R+ I +I P
Sbjct: 261 SDRRAESAAALLTQQFGVPAENLTSQGYGEQYLKV--NTQAAERQNRRVTIRRITP 314
>gi|119468930|ref|ZP_01611955.1| hypothetical protein ATW7_04182 [Alteromonadales bacterium TW-7]
gi|119447582|gb|EAW28849.1| hypothetical protein ATW7_04182 [Alteromonadales bacterium TW-7]
Length = 244
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/232 (10%), Positives = 67/232 (28%), Gaps = 54/232 (23%)
Query: 2 IKELGLSMFIMTTISG---CGLASREKKKVFLHKSNDT--------------------DI 38
+K+ +++ ++ S + K ++
Sbjct: 1 MKKTLIALTLVAGFSAPTFSSASEHSPSKEATQETAIGLGTGAIIGGVVGGPIGAFIGAF 60
Query: 39 VNKRFG------SSLDKAEDEFQ-----------------------MQLQDTGIVVSRIG 69
G + LD+ + L +++
Sbjct: 61 AGGLIGDAKVADNKLDEQQRALAVMKQKTNDYQHVLNHNNLLEQQLEVLAQQNEQLTQSQ 120
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ V + F L + +LN P + + D G + N L+
Sbjct: 121 INNLLAMTVQ-FKTGSSTIAPHFAKQLDQLVVLLNNQPQLALDLSGFADQRGDEQANFLL 179
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S++R + + + + S++ +S + F ++ + ++T ++R+ +
Sbjct: 180 SKKRVNAV-QSYLIKHGVSHKRLSTQAFGEQHTLANSNTIEDNFFDRRVTLT 230
>gi|220935619|ref|YP_002514518.1| sodium-type flagellar protein MotY, putative [Thioalkalivibrio sp.
HL-EbGR7]
gi|219996929|gb|ACL73531.1| sodium-type flagellar protein MotY, putative [Thioalkalivibrio sp.
HL-EbGR7]
Length = 280
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 1/104 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ + L+ + T + + H D G N +S+ RA+ +
Sbjct: 178 FDTNLSRLDARAHETLREVLTAWRAQRHMRVIVAGHADVRGGDTINDPLSRRRAEAV-RT 236
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I +R F +P+D + + N+R + + P
Sbjct: 237 FLDVYGIPRNRIELRSFGATWPLDPGEGEAAWALNRRATVWLAP 280
>gi|221134181|ref|ZP_03560486.1| hypothetical protein GHTCC_04568 [Glaciecola sp. HTCC2999]
Length = 303
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 60/166 (36%), Gaps = 4/166 (2%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
++ ++ + + + + ++ K E ++ ++ +
Sbjct: 134 AQHNVEIEIDTTAQEESAQEEVVETIIKEETVISEPARNQE---DDFAQILLLLNADNQF 190
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ + K++ L I+ +P + TD +G +NN+ + Q RAD +
Sbjct: 191 ATNSSEVNLKYVARLAQAVQIIQYYPQLQFHVVGSTDELGNTENNMALGQARADGVAR-Y 249
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
++ S ISV P+ D R N+R+ I + + N
Sbjct: 250 LEAFGISMDRISVMTNGEANPLFPGDAPHIRLTNRRVNITLSLKDN 295
>gi|84500718|ref|ZP_00998967.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
gi|84391671|gb|EAQ04003.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
Length = 519
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 58/160 (36%), Gaps = 8/160 (5%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
L + RF +++ +A ++ + + +T
Sbjct: 362 DQLPEEIPIADQGTRFANAIAQAGGGIALEELQRMVSTLTPYERLTVSFR---FEAGSAL 418
Query: 88 LEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ + ++ A L + + +D G NL IS+ERA ++ ++
Sbjct: 419 LDAQSRSNIEQFAAALENGLYDGREVMFVGFSDGSGDAATNLRISRERARAVRRAVVLAA 478
Query: 146 VSSN---RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++ F P+ +D+ GRQ N+R+E+ I
Sbjct: 479 GDAELDRIRMTTDAFGEAMPMACDDSHWGRQVNRRVEVWI 518
>gi|66043829|ref|YP_233670.1| flagellar motor protein MotB [Pseudomonas syringae pv. syringae
B728a]
gi|63254536|gb|AAY35632.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|330971543|gb|EGH71609.1| flagellar motor protein MotB [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 349
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 59/178 (33%), Gaps = 15/178 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCY 75
+ ++ + +R L + + + + Q I+ D +
Sbjct: 98 SPDTVPLEAENAETKAEAVEQERLEMLLQELQTKVEENPQLQKFKDQILFEITQDGLRIQ 157
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNL 127
I + L+ F +L +A + P+ ++I HTD+ N
Sbjct: 158 IMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN-KVSISGHTDATPFVGSGGFGNW 216
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S RA+ + L+ ++ V G+A + N+RI+I + +
Sbjct: 217 ELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYDRQNPTN-PINRRIDIVVLTK 272
>gi|119474693|ref|ZP_01615046.1| hypothetical protein GP2143_12776 [marine gamma proteobacterium
HTCC2143]
gi|119450896|gb|EAW32129.1| hypothetical protein GP2143_12776 [marine gamma proteobacterium
HTCC2143]
Length = 209
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 11/145 (7%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATIL 103
+ ++ + L I V F + L+ + +LQ + L
Sbjct: 55 QAEEQRRMALEQALAAPLATGRVTLTNGRIGISGSVLFATNSDQLQVEGRELLQTLVAPL 114
Query: 104 NKF---PSTVIAIQSHTDSIG------TLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+ ++ + TD +N +S ERA + LI+ + +
Sbjct: 115 QVYLGERDEMLMVSGFTDDKPIQRGNNRFADNWELSSERALTVTRALIEE-GMPSSMVFA 173
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIE 179
F + P+ N R N+R+E
Sbjct: 174 AAFGAQQPVVPNTDGDSRARNRRVE 198
>gi|294011226|ref|YP_003544686.1| OOP-family protein [Sphingobium japonicum UT26S]
gi|292674556|dbj|BAI96074.1| OOP-family protein [Sphingobium japonicum UT26S]
Length = 360
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + +L + + S + + + D G+ N+ +SQ RAD +
Sbjct: 252 VFFEWDKSDITPDAATILDNAVSAYSNCGSAQVMLAGYADRSGSASYNVGLSQRRADAV- 310
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I + I+ + F P V N+R+EI
Sbjct: 311 KAYISSKGIPDGVITTQAFGESNPRVETADGVRELQNRRVEIT 353
>gi|251733485|emb|CAR82492.1| pal [Sinorhizobium kostiense]
gi|251733487|emb|CAR82493.1| pal [Sinorhizobium kostiense]
gi|251733489|emb|CAR82494.1| pal [Sinorhizobium kostiense]
Length = 87
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L K+P+ I ++ H D GT + NL + RA + YLI
Sbjct: 2 DSSSIRADAQATLDRQAQWLAKYPNYAITVEGHADERGTREYNLALGARRAAATRDYLIS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RGV +NR ++ + + P+ D
Sbjct: 62 RGVPANRMRTIS-YGKEKPVAVCDD 85
>gi|86747447|ref|YP_483943.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86570475|gb|ABD05032.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 651
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + LQ+IA LN+ P V I+ HTD++G +NL +
Sbjct: 518 IDLNTITFETGSWDIPPDQAAKLQVIADGLNRAIQRNPREVFLIEGHTDAVGNDTDNLSL 577
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA+ + L Q+ ++ +G+ +Y D + N+R+ + +I P
Sbjct: 578 SDRRAESAATLLTQQFGVPAENLTSQGYGEQYLKVPTDGPE--RQNRRVTVRRITP 631
>gi|303248925|ref|ZP_07335172.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
gi|302489648|gb|EFL49584.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
Length = 355
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 11/142 (7%)
Query: 49 KAEDEFQMQLQD--TGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATI 102
+ E Q + + + V++ D + I + + V L +L + +
Sbjct: 148 QLEQALQKDVPELAGQVSVTQSNDKVRIEIMDKADRPLFDLGGVTLLPDAKRILAAVTDV 207
Query: 103 LNKFPSTVIAIQSHTDSIGTL--KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ K +AI+ HTD+ N +S RA + +IQ+G+S ++ +V G+A
Sbjct: 208 IKK-EGVKVAIEGHTDAYRYSGTYTNWDLSAGRALAARRMMIQQGLSPDQVAAVTGYADT 266
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
P + N+RI + +
Sbjct: 267 RPYVPGNLYD--PKNRRISLLL 286
>gi|242281267|ref|YP_002993396.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242124161|gb|ACS81857.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 276
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 50/153 (32%), Gaps = 16/153 (10%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ L+ + ++ S I + L + +L + +L
Sbjct: 83 QADLEPIKPLLWEFAEEDLRFESNRFVQILSIGADVLFTPDSTSLSIEGTRILDTVLPVL 142
Query: 104 NKFPSTVIAIQSHTDSIGTL--------------KNNLLISQERADVIKSYLIQRGVSSN 149
+ + + HT + + IS R+ + +YLI+ +
Sbjct: 143 KRVKH-PVLVAGHTSILRDELGEDYRVEDRDLTPDISWKISLNRSLAVYNYLIRN-GMDS 200
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + F P N T GR+ N+R+++ +
Sbjct: 201 EMLKMEAFGKFRPRHPNSTPEGRKMNRRVDLVL 233
>gi|153875209|ref|ZP_02003108.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152068328|gb|EDN66893.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 295
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 3/138 (2%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
DKA F L + +++ + F+ + L K+++ LQ+IA +
Sbjct: 157 DKATKAFGQLLILSLKENNKLNIKFLFDVNSP-EFIDDAGLIKEYMAWLQMIAQYFQENN 215
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I H GT N +S RA ++ + + +V G ++ +
Sbjct: 216 QC-FQIAGHCSRTGTATYNDKLSLSRALTVQKLMQAYLPDIMQRTTVVGKGFRENLVGIG 274
Query: 168 TKVGR-QNNQRIEIQIFP 184
T R ++R+EI +
Sbjct: 275 TDDARDAIDRRVEILVMN 292
>gi|186477671|ref|YP_001859141.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184194130|gb|ACC72095.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 590
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 6/146 (4%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ + + + L G + + T + V S+ + + L
Sbjct: 442 AQAVADAAQSFRNAARSLLA-PGASCATTDLLKTLNLQVVNFASSDAHVPQSAFDDLGQS 500
Query: 100 ATILNKFPS----TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
A +L + + ++D++G+ N +S+ERAD + + + + R
Sbjct: 501 AKLLQACAKSGHALKLEVAGYSDNVGSESANRELSKERADAV-RAFLVKAGVPADALIAR 559
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G+ + +N T+ GR N+RIE
Sbjct: 560 GYGNVRAVASNATESGRFANRRIEFT 585
>gi|85860625|ref|YP_462827.1| outer membrane protein [Syntrophus aciditrophicus SB]
gi|85723716|gb|ABC78659.1| outer membrane protein [Syntrophus aciditrophicus SB]
Length = 204
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 67/199 (33%), Gaps = 24/199 (12%)
Query: 5 LGLSMFIMTTISGCGLASREKK-------------KVFLHKSNDTDIVNKRFGSSLDKAE 51
L S F++ + + C A R + V + D+A
Sbjct: 8 LLASAFMLLSFAACAPAHRTRVILIPDPDGKVGEITVQNKGGAQIMTQAGQMAEVHDEAT 67
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVH------VSFVSEVFLEKKFLPMLQLIATILNK 105
+ RI + +P + L L +L ++
Sbjct: 68 APVSPASVMDDKEIHRIFGDVLAALPEKPLTFILYFKTNSFELNIPSLKVLNSAHEAISS 127
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
S I++ HTD +GT + N ++S++RA +K YL+ + I + P+
Sbjct: 128 RQSEDISVIGHTDRVGTDEKNYILSRKRALSVKKYLVVK-GVHPDAIELDYHGEANPLV- 185
Query: 166 NDTKVGRQ--NNQRIEIQI 182
T G N+R+E+ +
Sbjct: 186 -KTAEGVAEPRNRRVEVIV 203
>gi|251733505|emb|CAR82502.1| pal [Ensifer adhaerens]
Length = 87
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L K+P+ + I+ H D GT + NL + RA K YLI
Sbjct: 2 DSTSVRADAQQTLDRQAQWLAKYPNYAVTIEGHADERGTREYNLALGARRAASTKDYLIS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RGV +NR ++ + + P+ D
Sbjct: 62 RGVPANRLKTIS-YGKEKPVAVCDD 85
>gi|126662707|ref|ZP_01733706.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
gi|126626086|gb|EAZ96775.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
Length = 283
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 17/142 (11%)
Query: 56 MQLQDTGIVVSRIGDMIT---CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
L+ G+ + D I Y+ + L K L IA L+K+ +
Sbjct: 140 EDLKIPGVYSTIKKDRIIDDRIYLDHVLFERGSSQLTYKAKKELDRIALELHKYKNIHFE 199
Query: 113 IQSHTDSIG--------TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
IQ H +S RA + +Y + + +S R + +G+ +
Sbjct: 200 IQGHVCCTPTFQKEAIDRDTKKRELSINRAKRVYNYFLMKRISKTRM-TFKGYGNTQSLK 258
Query: 165 TNDTKVGRQNNQRIEIQIFPRG 186
T ++R+E+ I
Sbjct: 259 KGST-----LDRRVELLITKND 275
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 51/124 (41%), Gaps = 6/124 (4%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ I +++ + + ++ L+++ + + ++ + I + D
Sbjct: 13 SAISIAQEDEEVH----SIFFEFNKFNLKEEQADAVVAFVSKIDTSRIESVQIFGYCDDR 68
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--KVGRQNNQRI 178
G N +S RA+ +K LI++G+ S I++ G + T R N+R+
Sbjct: 69 GKDAYNYTLSTNRANTVKDKLIEKGIKSKIIITLEGKGRIMLDEDMQTNIPEARSKNRRV 128
Query: 179 EIQI 182
++ +
Sbjct: 129 DVVV 132
>gi|308048254|ref|YP_003911820.1| hypothetical protein Fbal_0532 [Ferrimonas balearica DSM 9799]
gi|307630444|gb|ADN74746.1| conserved hypothetical protein [Ferrimonas balearica DSM 9799]
Length = 3058
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + + +LQ ++ L + I+ H + + + NL +S+ RA +
Sbjct: 2946 LFANDSATIPATYDVVLQNLSEQLAPLADYQVVIEGHASAPASSRYNLSLSERRAQAVGE 3005
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + I+ + P +T+ N+R + +
Sbjct: 3006 -ALNQRGVESANITYVARGEEMPAVAGNTEHAYGQNRRAVVMV 3047
>gi|46398711|gb|AAS92041.1| IcmN protein [Legionella pneumophila]
Length = 165
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 2/140 (1%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIAT 101
+ D + L GI V+ +G IP F + L +L IA
Sbjct: 21 VDGACDATIIKMMTDLNKKGIKVASVGQNYXISIPASALFADQSPRLNWASYSLLNEIAA 80
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
L +F I + S++ ++K ++ R+ V+ YL + +R I +G
Sbjct: 81 FLKQFRKIAITVTSYSSKYVSVKRERALTLARSRVVSEYLWSQ-GVDSRIIFTQGLGSDK 139
Query: 162 PIDTNDTKVGRQNNQRIEIQ 181
PI + R N R+EI
Sbjct: 140 PITSYTLGGDRSPNARVEIT 159
>gi|73542264|ref|YP_296784.1| OmpA/MotB [Ralstonia eutropha JMP134]
gi|72119677|gb|AAZ61940.1| OmpA/MotB [Ralstonia eutropha JMP134]
Length = 218
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ + L + + L VI HTDS G+ K N +S RA+ +
Sbjct: 100 DTLFDFDKAVLKPEGKAKLDDLVSKLQGITLEVIIAVGHTDSFGSDKYNDRLSIRRAESV 159
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDT------NDTK--VGRQNNQRIEIQIF 183
K+YL+ + + G + N T +Q N+R+E+++
Sbjct: 160 KAYLVSK-GVEANRVYTEGKGKRQLKVDPKSCKGNRTAQIACQQPNRRVEVEVV 212
>gi|163789576|ref|ZP_02184014.1| Flagellar motor protein [Carnobacterium sp. AT7]
gi|159875108|gb|EDP69174.1| Flagellar motor protein [Carnobacterium sp. AT7]
Length = 61
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
QR + +SV G+ P N TK GR N+R++I I
Sbjct: 5 HKAYQRTGIDPKRVSVVGYGEYRPKADNKTKEGRLENRRVDILILN 50
>gi|254473486|ref|ZP_05086883.1| OmpA/MotB domain protein [Pseudovibrio sp. JE062]
gi|211957602|gb|EEA92805.1| OmpA/MotB domain protein [Pseudovibrio sp. JE062]
Length = 573
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 12/173 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
E + ++ D +K+ S + I + D + I
Sbjct: 401 AAKPTEAAQGAESGDDEDDEGDKQLVSIANSVGAALDGLKTGASIEFTHSRDGVLIRIMD 460
Query: 79 H----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT---LKNNLLISQ 131
+ + V + ++ IA +L + I I+ HTD+ +N +S
Sbjct: 461 NDDFGMFAVGSSEPHPDVVKAMEKIAKVLEEENG-EIVIRGHTDARPFKSKRNDNWRLST 519
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ-NNQRIEIQIF 183
RA + L++ G+ NR + + G+A + D + N+RIEI +
Sbjct: 520 ARAHMAYFMLVRGGLDENRIVGIEGYADRRLK---DVEEPYAPQNRRIEIMLM 569
>gi|323492706|ref|ZP_08097850.1| outer membrane protein [Vibrio brasiliensis LMG 20546]
gi|323313081|gb|EGA66201.1| outer membrane protein [Vibrio brasiliensis LMG 20546]
Length = 279
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + K++ L A +L + S +A+ H DS+G L N ++ RA +
Sbjct: 157 DNQFAFNSTEVNPKYMGHLARAANLLEQHSSLSLAVTGHADSVGDLAYNQKLAMGRAQQV 216
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K YLI S I P+ +++ R N+R+ I++
Sbjct: 217 KRYLII-FGLSPERIKTHSVGDTLPLYEGESEGVRLTNRRVSIEVI 261
>gi|325982085|ref|YP_004294487.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
gi|325531604|gb|ADZ26325.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
Length = 225
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/223 (14%), Positives = 63/223 (28%), Gaps = 44/223 (19%)
Query: 2 IKELGL-----------SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS----- 45
+K++ +MF ++ + K I + +
Sbjct: 1 MKKISAKNTLIGMVLIPAMFSGAVLAQEANTDQSVADTAATKPQAYGIDGRGEVARNSTG 60
Query: 46 -----------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFL 88
D + + V + IT + L
Sbjct: 61 LCWRTSYWTPAMAIHECDPDLVKKPEVVAEAPAPAPVKTAPEKITFSA-DALFDFDSSKL 119
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ + L T + +I + D IG+ + N +S RA+ +KS+L+ R
Sbjct: 120 KPNGIQSLNEFVTGIEGVKYDLIIAVGYADRIGSDEYNKALSLRRAESVKSHLVSR-GID 178
Query: 149 NRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
I V G P+ N ++R+EI++
Sbjct: 179 PSLIFVDGKGEANPVTGNSCAGERKSKALIECLAPDRRVEIEV 221
>gi|150024778|ref|YP_001295604.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
JIP02/86]
gi|149771319|emb|CAL42788.1| Probable outer membrane protein, OmpA family [Flavobacterium
psychrophilum JIP02/86]
Length = 283
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 7/145 (4%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGD---MITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+ + + L + + + I + ++ L ++ +
Sbjct: 141 YSSENPEILKQFLASEKSIFEKFKNAKKGDIIVINNILFQINSEKLANGSSQIIIDLLDY 200
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
L P I I + + +S RA I YLI+ G++++R + G+ P
Sbjct: 201 LTNNPKIKIEIHGNICCNPNTNDV-KLSYRRAKYIFDYLIKNGIATSR-LGYHGYGSANP 258
Query: 163 ID--TNDTKVGRQNNQRIEIQIFPR 185
I + N+R+EI I +
Sbjct: 259 IYKIPEKSYQEELANRRVEILIIEK 283
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ + L + T +K ++ I TDS+ T N +S +RA I
Sbjct: 23 EIYFDFNKTDINPTTKIKLDSLIT--SKNKIEILKIYGFTDSVDTTTYNDSLSIKRAKKI 80
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+Y + V + + ++GF Y N N+
Sbjct: 81 FNYCKENKVQISNQVEIKGFGENYNQSKNSN-----KNR 114
>gi|94309657|ref|YP_582867.1| OmpA/MotB [Cupriavidus metallidurans CH34]
gi|93353509|gb|ABF07598.1| outer membrane protein or related peptidoglycan-associated
(lipo)protein [Cupriavidus metallidurans CH34]
Length = 217
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ + L + + L VI HTDS G+ K N +S RA+ +
Sbjct: 99 DTLFDFDKAVLKPEGKAKLDDLVSKLQGITLEVIIAVGHTDSFGSDKYNDRLSIRRAESV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDT------NDTK--VGRQNNQRIEIQIF 183
K+YL+ + + G + N T +Q N+R+E+++
Sbjct: 159 KAYLVSK-GVEANRVYTEGKGKRQLKVDPKSCKGNRTAQIACQQPNRRVEVEVV 211
>gi|256821499|ref|YP_003145462.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069]
gi|256795038|gb|ACV25694.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069]
Length = 459
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L+ K +Q + + + + + T GT + + S+ A +I
Sbjct: 359 FDEGTDELDNKAKLDIQRLVKYVEQNQLEDLFLFGFTYESGTEETDKDDSKRLARIIARE 418
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L + GV V+GF K I +N T+ GR N+R+E+ +
Sbjct: 419 LEKAGVKP---FYVQGFGSKGAIASNSTENGRNKNRRVEVWV 457
>gi|45758057|gb|AAO85787.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 372
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L ++ + I + +TD IG +NL +SQ RA
Sbjct: 249 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLSIQVNGYTDRIGKEASNLKLSQRRA 308
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + ++ ++ G+ P+ T D GR ++R+EIQ+
Sbjct: 309 ETVANYIVSK-GTNPANVTAVGYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 364
>gi|329755862|gb|AEC04328.1| outer membrane protein A [Pasteurella multocida]
Length = 348
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 59/162 (36%), Gaps = 22/162 (13%)
Query: 45 SSLDKAEDEFQMQLQ----------DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
D +F+ + + V + + L+
Sbjct: 189 EYADGQYADFRPDIGSVTAGLSYRFGQSVYVPEVVSKTFTLNTDVTFGFDKADLKPAAQN 248
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+L I + + S +A+ +TD +G+ NL +SQ RAD + + ++ + IS
Sbjct: 249 VLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRRADTVAN-YLEAKGVAQNAISA 307
Query: 155 RGFAYKYPIDTN--DTKVGR-------QNNQRIEIQIFPRGN 187
G P+ N D+ GR +++ +EI + +GN
Sbjct: 308 TGHGEANPVTGNKCDSVKGRKALIACLADDRPVEIAV--KGN 347
>gi|124007657|ref|ZP_01692361.1| outer membrane protein OmpA family, putative [Microscilla marina
ATCC 23134]
gi|123986955|gb|EAY26720.1| outer membrane protein OmpA family, putative [Microscilla marina
ATCC 23134]
Length = 632
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 10/163 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC----Y 75
+ K+ +SN T + S D A+ + + ++ + R G
Sbjct: 469 SQADLSKRWANKESNQTVKPRHKIHSESDLAKAYPEFKPYESNTFIKRNGGQTNILAKLK 528
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+P L+ + LQ + ++ P + +++HTD+ GT +NLL+S++RA
Sbjct: 529 MPHLYFAYKSTILDAQSRVYLQTVYKLMQHHPDLHLRVEAHTDASGTWTSNLLLSEQRAK 588
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ + + I V+GF P+ + N+R+
Sbjct: 589 AV-KAFLTDLGIPSGQIVVKGFGEARPLGASA-----AKNRRV 625
>gi|87201146|ref|YP_498403.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
gi|87136827|gb|ABD27569.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
Length = 357
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 35/103 (33%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + + +L T S I + + D GT+K N +S+ R +
Sbjct: 249 VFFDWDKSDITPEAATILDNAITAYGNCASVPIMLAGYADRSGTVKYNQGLSERRNASV- 307
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + I+ + F P V N+R+EI
Sbjct: 308 RSYLTTHGVPDGSITSQAFGESNPRVPTADGVRELQNRRVEIT 350
>gi|325274583|ref|ZP_08140640.1| peptidoglycan-associated lipoprotein [Pseudomonas sp. TJI-51]
gi|324100285|gb|EGB98074.1| peptidoglycan-associated lipoprotein [Pseudomonas sp. TJI-51]
Length = 146
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 22/147 (14%)
Query: 17 GCGLASREKK-KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
GC + + N N E +
Sbjct: 21 GCSSKGGDNAGEGAAVDPNAGYGANTGAVDGSLSEEAALRA------------------- 61
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I L+ + + L + A L + + ++ +TD GT + N+ + + RA
Sbjct: 62 ITTFYFEYDSSDLKPEAMRALDVHAKDLKANGN-RVVLEGNTDERGTREYNMALGERRAK 120
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYP 162
++ YL+ + S + V + + P
Sbjct: 121 AVQRYLVLQ-GVSPAQLEVVSYGEERP 146
>gi|260777763|ref|ZP_05886656.1| hypothetical protein VIC_003160 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605776|gb|EEX32061.1| hypothetical protein VIC_003160 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 1581
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 16/160 (10%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQ-LQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLE---KK 91
+ N + +K E + I + + + I + +F S + LE
Sbjct: 567 PVWNTSRENQQEKIEQVLEKARAASDEITATMVNNSRGAGIKIEFNFNSRKSELERNAPL 626
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
F + +A +L + + I+ H + T + N+ +S +RA+ K LI+
Sbjct: 627 FSQLASALAEVLESESNLRVEIEGHACQVDTEEANMKVSADRANYAKQLLIESSDVFKDR 686
Query: 152 ISVRGFAYKYP---------IDTNDTKVGRQNNQRIEIQI 182
ISV F P ID N+ + N+R+EI+I
Sbjct: 687 ISVAVFGESKPLYIPKKGESIDRNNP--NLRQNRRVEIRI 724
>gi|218708117|ref|YP_002415738.1| putative outer membrane protein [Vibrio splendidus LGP32]
gi|218321136|emb|CAV17086.1| putative outer membrane protein, ompA/motB [Vibrio splendidus
LGP32]
Length = 213
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G + + + L +K +L + L + + + +TDS G+ NL
Sbjct: 101 EGKLAREVLARVTFDFDDDELNQKSRYLLLKLIAKL-EHQTPEFIVTGNTDSKGSDSYNL 159
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ +R++ + ++ + ++V P+ +N+T+ GR NN+R++
Sbjct: 160 SLGLQRSNAVV-GYLKEQGVNIEDLTVSSQGEANPVQSNETESGRHNNRRVD 210
>gi|254228801|ref|ZP_04922224.1| OmpA family protein [Vibrio sp. Ex25]
gi|151938748|gb|EDN57583.1| OmpA family protein [Vibrio sp. Ex25]
Length = 281
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L +K L + + ++ T I I HTD++G+ NL +S+ RA+ +
Sbjct: 153 FDFGQKVLSRKQQETLAALNSYVSVDDRVTKILIDGHTDNVGSSLANLSVSRTRAEQVAE 212
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
L++ I R +YPI +N++ G+ N+R+ +++ R N +
Sbjct: 213 ALVEL-GIDKSMIETRAHGSRYPIASNNSTKGQAKNRRVTLRLV-RDNER 260
>gi|332664418|ref|YP_004447206.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332333232|gb|AEE50333.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 289
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 78 VHVSFVSEVFLEK--KFLPML------QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
++F E F +F P+L + L + ++I HTDS G KNNL +
Sbjct: 177 EDMTFSDESFAPDGVEFRPILPLVQYADSVRQYLALHKNKKLSIIGHTDSTGDAKNNLKL 236
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
ERA Y + ++ K+P+ N T+VG++ N+RI I
Sbjct: 237 GLERAQNTMRYFREL-GIPPSQMAAYSEGSKHPVSDNSTEVGKRRNRRINFII 288
>gi|46200841|ref|ZP_00207866.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 342
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + + +LQ A + I + +HTD G+ K N +S++R +K
Sbjct: 239 VFFDFDKAQITPEAARVLQQAAGAAKTAGAARIDLSAHTDLSGSAKYNQALSEKRGAAVK 298
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +++ I V P+ V N+R+EI +
Sbjct: 299 AQ-LEQLGIPASQIVVVAKGKSSPMVPTPDGVREPQNRRVEIVL 341
>gi|218533090|ref|YP_002423906.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
gi|218525393|gb|ACK85978.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
Length = 723
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 7/140 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT----ILNK 105
+ + + L M + I + L IA +
Sbjct: 571 QKLDRRYTLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKRLSTIAEAINRTIKD 630
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P V I+ +TD++G+ +NL +S RA + S L Q ++ +G+ +Y
Sbjct: 631 NPQEVFLIEGYTDAVGSDIDNLSLSDRRAQSVASVLTQNFQVPPENLTTQGYGEQYLKV- 689
Query: 166 NDTKVGRQNNQRIEI-QIFP 184
+T+ + N+R+ + +I P
Sbjct: 690 -NTQDANRENRRVTVRRITP 708
>gi|167033093|ref|YP_001668324.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166859581|gb|ABY97988.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 435
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 54/168 (32%), Gaps = 13/168 (7%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV---- 80
D G ++ + Q++ + +
Sbjct: 270 PANPKPQSKALADFAQSPAGQAIVAQQGFVSQQIKAQPVPPQSDMPPRYRTLAQQAQRLS 329
Query: 81 ----SFVSEVFLEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERA 134
L+ K L +Q +A L + + + D T L+S+ RA
Sbjct: 330 VNFRFQEGSASLDNKALRDVQRVAEYLRQAGKLQSKAVLVGFGDPKETPGRAALLSRLRA 389
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ L + GV + V G + P+ N+ + GR N+R+E+ +
Sbjct: 390 QAVRRELARDGV---EVLEVTGMGDELPVAGNELEQGRLRNRRVEVWV 434
>gi|260768753|ref|ZP_05877687.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
gi|260616783|gb|EEX41968.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
Length = 324
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 61/174 (35%), Gaps = 9/174 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG---IVVSRIGDMIT 73
E ++ + ++ + + ++ +L G + ++ G I
Sbjct: 89 ATAHIDAEFDRIRDASLIEGEVDTHQELELFSRLIEDQVNELDGAGSVNVQITPQGLKII 148
Query: 74 CYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA--IQSHTDSIGTLKNNLLI 129
+ + + +L +A + ++ + +I + GT N +
Sbjct: 149 ISDSDKGPMFNRGGSSMTPYYQDLLLNLAPVFSRVENAIIVTGHTDASRFRGTSMTNWEL 208
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S RA+ + +L GV + V G A P+ + K G N+RIEI +
Sbjct: 209 SSNRANSARYFLNSGGVPRAQIFQVSGMAESAPLLPENPKSG--QNRRIEIFLL 260
>gi|239820234|ref|YP_002947419.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
gi|239805087|gb|ACS22153.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
Length = 276
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 47/136 (34%), Gaps = 13/136 (9%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEV--FLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ S T F L + L +A + + I + +
Sbjct: 144 AERPAAASPAPRRTTLGADGLFRFDGRSLADLLPEGRRKLDALAGDIKAADA--IKVTGY 201
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-- 174
TD +G+ N +S RA+ ++ + + + I V+G P T+ R
Sbjct: 202 TDRLGSQAYNSALSLARANTVRD-YLVQAGVPAQKIQVQGKGESEPKVQC-TQTARAALI 259
Query: 175 -----NQRIEIQIFPR 185
N+R+EI++F
Sbjct: 260 DCLAPNRRVEIEVFAE 275
>gi|302035839|ref|YP_003796161.1| hypothetical protein NIDE0460 [Candidatus Nitrospira defluvii]
gi|300603903|emb|CBK40235.1| exported protein of unknown function, OmpA family [Candidatus
Nitrospira defluvii]
Length = 236
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 76 IPVHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + + L A L + P ++ I H D GT NL++ ++RA
Sbjct: 128 LKDVFYGYDRYSVSDNDGVVSLTTNADWLKENPKALLKISGHCDERGTHDYNLVLGEKRA 187
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
KS+L+ + + +++ + P + + Q N+R
Sbjct: 188 KAAKSFLVDL-GVNAKQVAIVSYGKDRPFCADHDEACHQQNRR 229
>gi|260467234|ref|ZP_05813410.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
gi|259029009|gb|EEW30309.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
Length = 403
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATI----LNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + + LQ +A L K P+ I+ HTD++GT + NL
Sbjct: 280 RIDLDTLNFEFGSSSISDTEVQKLQGVADAMEKLLKKNPAETFLIEGHTDAVGTPEANLA 339
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
+S RA+ + L ++ +G+ +Y DT + N+R+ I +I P
Sbjct: 340 LSDRRAEAVAEALTNAFGIPAENLTTQGYGEEYLKV--DTSAPNRENRRVAIRRITP 394
>gi|254512328|ref|ZP_05124395.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
gi|221536039|gb|EEE39027.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
Length = 515
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 66/171 (38%), Gaps = 11/171 (6%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP----- 77
+ +V + ++ D + G L + T + + + MI P
Sbjct: 344 SDAAQVVIRQAGFVDQSPEMIGMGLQGDRLANAISTGGTEVGLEELQRMIETLRPLSRLS 403
Query: 78 -VHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + + +A L ++ +A +D G +N I+ RA
Sbjct: 404 LSFRFEPGSSHPDAQSRSNILQLAQALENGTLDASHLAFVGFSDGDGAAASNTRIALRRA 463
Query: 135 DVIKSYL---IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+++ + ++ + + I+V GF P+ +DT+ GR+ N+R+E+ +
Sbjct: 464 RTVRNAVLGAVETSIPDSIEITVEGFGEAMPMACDDTEWGRKVNRRVEVWV 514
>gi|327405082|ref|YP_004345920.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320590|gb|AEA45082.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 694
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 45/141 (31%), Gaps = 30/141 (21%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
I + L +L + L + V+ I SHTD+ G NL +SQ R
Sbjct: 555 IEIEGIEYDFNSDKLRPASEAVLDKLLEFLELNNNIVVEINSHTDARGKDIYNLDLSQRR 614
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYP-------IDTNDTKVG--------------- 171
A YL+ +G++ R I +G+ P G
Sbjct: 615 AKSCVDYLVSKGITPERLI-AKGYGETQPNQLYGPDKKPVLDAEGKPVLLTEAYIDTFKV 673
Query: 172 -------RQNNQRIEIQIFPR 185
Q N+R ++ +
Sbjct: 674 KAEREVLHQKNRRTSFKVINQ 694
>gi|54308335|ref|YP_129355.1| hypothetical protein PBPRA1142 [Photobacterium profundum SS9]
gi|46912763|emb|CAG19553.1| hypothetical protein PBPRA1142 [Photobacterium profundum SS9]
Length = 168
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 54/179 (30%), Gaps = 22/179 (12%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K ++T ++GC ++DK +D +
Sbjct: 1 MKVFLRTVCITLLLTLMAGC------------------VTDTYVSDENIDKFDDLSVKKF 42
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I + + V + L+ + + L + I I HTD
Sbjct: 43 LIAEIQPTVEPEKKIYLSLVSHFDFDKSILKPEDIAELDDFIAKVINLKG-HIVIAGHTD 101
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ N +S R+ VI+ YL R N V F PI + N+R
Sbjct: 102 YQGSDDYNEKLSFRRSTVIQQYLAARIPVENYTFEVAYFGENNPIVKAHSLKANALNRR 160
>gi|46398693|gb|AAS92032.1| IcmN protein [Legionella pneumophila]
Length = 145
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 2/140 (1%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIAT 101
+ D + L GI V+ +G IP F + L +L IA
Sbjct: 1 VDGACDATIIKMMTDLNKKGIKVASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAA 60
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
L +F I + S++ ++K ++ R+ V+ YL + +R I +G
Sbjct: 61 FLKQFRKIAITVTSYSSKYVSVKRERALTLARSRVVSEYLWSQ-GVDSRIIFTQGLGSDK 119
Query: 162 PIDTNDTKVGRQNNQRIEIQ 181
PI + R N R+EI
Sbjct: 120 PITSYTLGGDRSPNARVEIT 139
>gi|331018731|gb|EGH98787.1| OmpA domain-containing protein [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 830
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA L P+ I I H D +G ++N+ +S++
Sbjct: 711 SDTLFAFGRADFQSLKVEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSKQ 770
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA IK+YL+ + + G + P+ D + R N+R+EI++
Sbjct: 771 RAQTIKTYLVGK-GVPAELVDAVGEGSEKPLVRCDMQQPRAQLIQCLEPNRRVEIEV 826
>gi|329755864|gb|AEC04329.1| outer membrane protein A [Pasteurella multocida]
Length = 351
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 1/111 (0%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V + + + L+ +L I + + S +A+ +TD
Sbjct: 217 GQTVYVPEVVNKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDR 276
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+G+ NL +SQ RAD + +YL+ + + IS G P+ N
Sbjct: 277 LGSDAYNLKLSQRRADTVANYLVAK-GVAQNAISATGHGEANPVTGNKCDA 326
>gi|213970767|ref|ZP_03398891.1| OmpA domain protein [Pseudomonas syringae pv. tomato T1]
gi|301383000|ref|ZP_07231418.1| OmpA domain-containing protein [Pseudomonas syringae pv. tomato
Max13]
gi|302059103|ref|ZP_07250644.1| OmpA domain-containing protein [Pseudomonas syringae pv. tomato
K40]
gi|302133343|ref|ZP_07259333.1| OmpA domain-containing protein [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213924439|gb|EEB58010.1| OmpA domain protein [Pseudomonas syringae pv. tomato T1]
Length = 830
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA L P+ I I H D +G ++N+ +S++
Sbjct: 711 SDTLFAFGRADFQSLKVEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSKQ 770
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA IK+YL+ + + G + P+ D + R N+R+EI++
Sbjct: 771 RAQTIKTYLVGK-GVPAELVDAVGEGSEKPLVRCDMQQPRAQLIQCLEPNRRVEIEV 826
>gi|182679602|ref|YP_001833748.1| OmpA/MotB domain-containing protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182635485|gb|ACB96259.1| OmpA/MotB domain protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 416
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 10/171 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G S + S + R S L+ + + I V + + +
Sbjct: 244 GETSSQLSVTPKEDSKELVAELNRIKSELNSVQKKISAAPSTPIIEVESTSEGVLLNLTD 303
Query: 79 HV----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQ 131
V V +K+ + +++ +A IL VI I+ +TD +N +S
Sbjct: 304 DVTYSMFAVGSSEPQKQTVQIMEKVAGILKSHTGNVI-IRGYTDGRPYKDGVYDNWRLST 362
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + + LI+ G+ R + G+A ++ ++ D N+RIEI +
Sbjct: 363 SRALMAQYMLIRGGLDPKRVEHIEGYADRHLKNSEDPNA--SVNRRIEILV 411
>gi|115522932|ref|YP_779843.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115516879|gb|ABJ04863.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 219
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 7/167 (4%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
L+ ++ L + T G D + L T I +
Sbjct: 47 ALSPKKPLTRGLSTAAPTQPAANVTGRLPDTLRNRPTRSLSSTEREQIASLTEARPNIDL 106
Query: 79 HV-SFVSEVFLEKKFLPMLQLIATILNKFPSTV---IAIQSHTDSIGTLKNNLLISQERA 134
+ + + K L + + L P + HTD++G+ N +S+ RA
Sbjct: 107 EINFDYNSANISAKALKAVDALGKAL-SNPDLKGSTFVVAGHTDAVGSEPYNQDLSERRA 165
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
D IK YL+ + + + G+ D + G N+R+++
Sbjct: 166 DAIKRYLVDKFGIAGTDLVTVGYGESKLKDASAPTAG--VNRRVQVV 210
>gi|207725377|ref|YP_002255773.1| outer membrane protein [Ralstonia solanacearum MolK2]
gi|207743944|ref|YP_002260336.1| outer membrane protein [Ralstonia solanacearum IPO1609]
gi|300704759|ref|YP_003746362.1| outer membrane protein, ompa domain [Ralstonia solanacearum
CFBP2957]
gi|206590613|emb|CAQ37575.1| outer membrane protein [Ralstonia solanacearum MolK2]
gi|206595346|emb|CAQ62273.1| outer membrane protein [Ralstonia solanacearum IPO1609]
gi|299072423|emb|CBJ43768.1| putative outer membrane protein, ompA domain [Ralstonia
solanacearum CFBP2957]
Length = 218
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ + L + + L V+ HTDS G+ K N +S RA+ +
Sbjct: 100 DALFDFDKAVLKPEGKAKLDDLVSKLKNITLEVVIAVGHTDSFGSDKYNDRLSVRRAEAV 159
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--------KVGRQNNQRIEIQIF 183
K YL+ + + G + + +Q N+R+E+++
Sbjct: 160 KGYLVSK-GIEANRVYTEGKGKRQLKVDPKSCKGARKAQIACQQPNRRVEVEVV 212
>gi|163800218|ref|ZP_02194119.1| hypothetical protein 1103602000595_AND4_06044 [Vibrio sp. AND4]
gi|159175661|gb|EDP60455.1| hypothetical protein AND4_06044 [Vibrio sp. AND4]
Length = 298
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 56/179 (31%), Gaps = 25/179 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K L M + GC N+ + ++ ++ L
Sbjct: 1 MKTTIRLLSGMIAGAILVGCS------------ADAYVSQENREKFADVNVSKFLISECL 48
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I + H F E + + L + I I HTD
Sbjct: 49 APQ--------REIHIAVAEHFDF-DESVIREADAASLDAFIRDIQGLSG-RITIVGHTD 98
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ + N +S RA+ +K+YL Q+ V+ F P+ ++ R N+R
Sbjct: 99 FKGSDEYNEKLSMRRAESVKAYLEQQLDLDQYDWEVKHFGESQPLVLGESDQARAENRR 157
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 2/108 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L+ + L L L I + HTD +G L N +++ RA + +Y
Sbjct: 191 FDFDNSELKPEELSQLDDFIAKLQGLEG-SIMVAGHTDQVGALSYNEQLAERRAQNVVAY 249
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
L + S V+ F P+ + N+R +F +
Sbjct: 250 LKTKLDPSQFAWEVKAFGELQPVINEVSPQANALNRRA-FIVFKESEV 296
>gi|118593012|ref|ZP_01550399.1| hypothetical protein SIAM614_29626 [Stappia aggregata IAM 12614]
gi|118434319|gb|EAV40973.1| hypothetical protein SIAM614_29626 [Stappia aggregata IAM 12614]
Length = 192
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 11/189 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ +L LS + I+ A + K N + S D+ + ++
Sbjct: 1 MNKLFLSSVAIAVIASATGALSQTKLSRNEIINSLQGAQQEVNISADELQKAAIENVEKY 60
Query: 62 GIVVSRIGDMITCYIP-------VHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIA 112
S + + + + LIA L+
Sbjct: 61 PGANSPQQLPLAAKLASLRQFNLEITFHFDSATIAPASYETVGLIADALHTPYLQGQTFF 120
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTD+ GT + NL +S +RA+ ++ L+ ++ G + D ++
Sbjct: 121 IVGHTDAKGTREYNLELSIKRAEAVRDALVTTFQVPAEYLFAVGLGEEQLRDPSNPDA-- 178
Query: 173 QNNQRIEIQ 181
N+R+++
Sbjct: 179 AVNRRVQLI 187
>gi|83646354|ref|YP_434789.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
gi|83634397|gb|ABC30364.1| Flagellar motor protein [Hahella chejuensis KCTC 2396]
Length = 263
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 70/228 (30%), Gaps = 56/228 (24%)
Query: 5 LGLSMFIMTTISGCG-----LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+ + ++ ++ E+ + + + V K E + +L
Sbjct: 26 IMAGLLVIFVLAAVALILELTQKSEQWDDAIKEIAKAEQVRKDILR-------EIEQELN 78
Query: 60 DTGIVVSRIGDMITCYIPVHV--SFVSEVFLEKK------FLPMLQLIATILNKFPST-- 109
+ I V + IP V + K L + +++ ++K
Sbjct: 79 EKNIPVKISDNDTVLRIPEDVLTFRQGRFDIPKDQLHQDIALEIGKVLFHTISKNSRWQY 138
Query: 110 --VIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRF-----------I 152
I ++ HTD + + N +S RA + ++ + R
Sbjct: 139 LDTIFVEGHTDKVPYRNSSIKGNWGLSTFRAISVWNFWNTMLEENERLGSLKNHMGKTLF 198
Query: 153 SVRGFAYKYPI-DTNDTK----------------VGRQNNQRIEIQIF 183
SV G+A P+ TN +Q N+RI+I+
Sbjct: 199 SVSGYADTRPVPCTNADPNVTLKELCPVGVLEESESQQKNRRIDIRFT 246
>gi|88801593|ref|ZP_01117121.1| OmpA family protein [Polaribacter irgensii 23-P]
gi|88782251|gb|EAR13428.1| OmpA family protein [Polaribacter irgensii 23-P]
Length = 651
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 12/131 (9%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + I ++ + + L I +I+ K+P ++A SHTD+ G N ++
Sbjct: 509 NELIIKINTIYFDSNKWNIRSEAAIELDKIVSIMTKYPKIIVASASHTDAKGNRAYNKIL 568
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI---DTNDTKVGR--------QNNQRI 178
SQ RA Y+I + S I +GF ND R Q N+R
Sbjct: 569 SQRRAKSAVDYIIYK-GISPERIYGKGFGEDELTNKCVDNDAHSNRVKCSKLQHQENRRT 627
Query: 179 EIQIFPRGNIK 189
+ I+
Sbjct: 628 SFLVLNIDEIE 638
>gi|300692122|ref|YP_003753117.1| outer membrane protein, ompA domain [Ralstonia solanacearum PSI07]
gi|299079182|emb|CBJ51850.1| putative outer membrane protein, ompA domain [Ralstonia
solanacearum PSI07]
Length = 218
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ + L + + L V+ HTDS G+ K N +S RA+ +
Sbjct: 100 DALFDFDKAVLKPEGKAKLDDLVSKLKNITLEVVIAVGHTDSFGSDKYNDRLSVRRAEAV 159
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--------KVGRQNNQRIEIQIF 183
K YL+ + + G + + +Q N+R+E+++
Sbjct: 160 KGYLVSK-GIEANRVYTEGKGKRQLKVDPKSCKGSRKAQIACQQPNRRVEVEVV 212
>gi|258646396|ref|ZP_05733865.1| OmpA family protein [Dialister invisus DSM 15470]
gi|260403798|gb|EEW97345.1| OmpA family protein [Dialister invisus DSM 15470]
Length = 357
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 51/159 (32%), Gaps = 8/159 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+K + G+ + ++T + D I
Sbjct: 203 GGSDRKAAYSGDDIDYSALDNKGNKKEADTVTITPAEEETAVP---ENDYYFISI---HF 256
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
L + + TDS G+ + N ++ R + Y
Sbjct: 257 GNDSDTPRADQTANLDAFVKAAKET-GHTFKLVGRTDSNGSKEYNDDLAIRRVKKVADYA 315
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ GV + + + + P+DTNDT+ GR NN+R++I
Sbjct: 316 VAHGVDLSHLVGMY-KGEEAPVDTNDTEAGRANNRRVDI 353
>gi|330955899|gb|EGH56159.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 132
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ I H D+ G + N ISQERA + + +S RG P ND+
Sbjct: 2 VLILGHADTSGPTEANQKISQERAQSVAAIFRL-SGLERNRLSQRGMGAVMPRAANDSLQ 60
Query: 171 GRQNNQRIEIQIFPRGNIK 189
GR N+R+EI + P+ ++
Sbjct: 61 GRALNRRVEILMTPQDTMR 79
>gi|315180456|gb|ADT87370.1| chemotaxis LafU protein [Vibrio furnissii NCTC 11218]
Length = 324
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 8/140 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNK 105
ED+ + V + I + + + +L +A + ++
Sbjct: 123 IEDQVNELDGAGSVNVQITPQGLKIIISDSDKGPMFNRGGSSMTPYYQDLLLNLAPVFSR 182
Query: 106 FPSTVIA--IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ +I + GT N +S RA+ + +L GV + V G A P+
Sbjct: 183 VENAIIVTGHTDASRFRGTSMTNWELSSNRANSARYFLNSGGVPRAQIFQVSGMAESAPL 242
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
+ K G N+RIEI +
Sbjct: 243 LPENPKSG--QNRRIEIFLL 260
>gi|240141603|ref|YP_002966083.1| hypothetical protein MexAM1_META1p5204 [Methylobacterium extorquens
AM1]
gi|240011580|gb|ACS42806.1| Conserved hypothetical protein; putative OmpA family member
[Methylobacterium extorquens AM1]
Length = 729
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 7/140 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT----ILNK 105
+ + + L M + I + L IA +
Sbjct: 577 QKLDRRYTLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKRLSTIAEAINRTIKD 636
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P V I+ +TD++G+ +NL +S RA + S L Q ++ +G+ +Y
Sbjct: 637 NPQEVFLIEGYTDAVGSDIDNLSLSDRRAQSVASVLTQNFQVPPENLTTQGYGEQYLKV- 695
Query: 166 NDTKVGRQNNQRIEI-QIFP 184
+T+ + N+R+ + +I P
Sbjct: 696 -NTQDANRENRRVTVRRITP 714
>gi|251733523|emb|CAR82511.1| pal [Ensifer adhaerens]
gi|251733525|emb|CAR82512.1| pal [Ensifer adhaerens]
gi|251733527|emb|CAR82513.1| pal [Ensifer adhaerens]
Length = 87
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L K+P+ I I+ H D GT + NL + RA + YLI
Sbjct: 2 DSTSIRADAQQTLARQAQWLAKYPNYAITIEGHADERGTREYNLALGARRAASTRDYLIS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
+GV SNR ++ + + P+ D
Sbjct: 62 QGVPSNRMKTIS-YGKEKPVAVCDD 85
>gi|116624434|ref|YP_826590.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116227596|gb|ABJ86305.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 508
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 7/126 (5%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + + + +P + L + L +A ++ + I+
Sbjct: 370 ESLNGLLPSRDTPRGLIVTVPDQGF--NGASLRTDYSERLARVAAVVAAEQGLRMTIEGS 427
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS T + + E D + + R G P+ +N T+ GR N+
Sbjct: 428 TDSAATESLAMKRAYEVRDAMMRGGLPSSSVDAR-----GLGASRPLTSNGTESGRSTNR 482
Query: 177 RIEIQI 182
R+EI I
Sbjct: 483 RVEIVI 488
>gi|284048662|ref|YP_003399001.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731]
gi|283952883|gb|ADB47686.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731]
Length = 351
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + L + P + + +TDS + N +S+ R
Sbjct: 244 LDSIHFDSDVDTPKASEAAKLANFVAVAKAHPDSTFKLVGNTDSDASNAYNEDLSKRRVL 303
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ Y GV+++R + P+ +N T+ G+ +N+R++I
Sbjct: 304 NVARYANDNGVAASRM-QLNYKGENNPVSSNATEAGKADNRRVDIW 348
>gi|251733513|emb|CAR82506.1| pal [Sinorhizobium terangae]
gi|251733515|emb|CAR82507.1| pal [Sinorhizobium terangae]
gi|251733517|emb|CAR82508.1| pal [Sinorhizobium terangae]
Length = 87
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L K+P+ I ++ H D GT + NL + RA + YL
Sbjct: 2 DSSSIRADAQATLDRQAQWLAKYPNYAITVEGHADERGTREYNLALGARRAAATRDYLAS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RGV +NR ++ + + P+ D
Sbjct: 62 RGVPANRMRTIS-YGKEKPVAVCDD 85
>gi|71907527|ref|YP_285114.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71847148|gb|AAZ46644.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 198
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 66/190 (34%), Gaps = 16/190 (8%)
Query: 8 SMFIMTTISGCGLAS----REKKKVFLHKSNDTDIVNKRFGSSLD------KAEDEFQMQ 57
+ + ++ CG S + T +R S D +A+ ++
Sbjct: 9 LVSLPLVLAACGGQSIVLVADPGGHVGQAEVVTAAGKQRLEKSGDMTQTSGEAKPPSAVK 68
Query: 58 LQDTGIVVSRIGDMITCYIP-----VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
D + S +++ P + L L + I K P+ +
Sbjct: 69 TADPAYIASTFAEVLAIEPPPPQVFTLMFESGTTNLTTASLDQIPNIVAASQKRPAVSVR 128
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I HTD+ G+ K N +S ERA + + L+Q+ R +SV P V
Sbjct: 129 ISGHTDATGSDKVNDALSLERAMQVWN-LLQQKGIPARLMSVTSHGKGNPAIPTPDGVAE 187
Query: 173 QNNQRIEIQI 182
N+R+ + +
Sbjct: 188 PRNRRVVVIV 197
>gi|42527170|ref|NP_972268.1| OmpA family protein [Treponema denticola ATCC 35405]
gi|41817594|gb|AAS12179.1| OmpA family protein [Treponema denticola ATCC 35405]
Length = 167
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 48/143 (33%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
K+ + E + ++ ++ +++ +L+
Sbjct: 21 SAPKQKEEKPAEPEKTQEQEVVKEETDKKANEKNMSDDYYTVYFAPQSYQIDQFTAQILK 80
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
I L I I H+ + + K+ I+ +RA + SY + + I V G
Sbjct: 81 EIGEDLKAKNVKKIVIYGHSAKLDSQKDEDRIALQRAIAVASYFQKMKLFDANNIIVEGK 140
Query: 158 AYKYPIDTNDTKVGRQNNQRIEI 180
P ++ R N+R+EI
Sbjct: 141 GASEPARSHSEITDRFKNRRVEI 163
>gi|300870375|ref|YP_003785246.1| peptidoglycan-associated lipoprotein [Brachyspira pilosicoli
95/1000]
gi|300688074|gb|ADK30745.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Brachyspira pilosicoli 95/1000]
Length = 202
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/191 (10%), Positives = 52/191 (27%), Gaps = 14/191 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L + + CG + + + + V + ++ L
Sbjct: 5 MKKLLFVFALFIFVISCGTTPE------MAPAENAEPVALAVQEEPQAVANTGELYLPQG 58
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + P + ++ + + L+K P+ + ++ HT + G
Sbjct: 59 TSIRDSQRGRVFETNPKIIFGFAKTTMPANANVAFAQVIEFLDKNPNVRLVVEGHTSNKG 118
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN-QRIEI 180
+ + + P + Q N +R E
Sbjct: 119 IAYPYNYNLSVNRVKNARAYLVNNGVDANRLIEKPLGEALP------ESNVQANLRRYEF 172
Query: 181 QIF-PRGNIKK 190
I + ++ K
Sbjct: 173 IIIENQADMDK 183
>gi|163796351|ref|ZP_02190312.1| OmpA/MotB [alpha proteobacterium BAL199]
gi|159178493|gb|EDP63035.1| OmpA/MotB [alpha proteobacterium BAL199]
Length = 561
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 17/140 (12%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK-------KFLPMLQLIATILNKFPST 109
++ V +GD + + + +F L+ IA + K
Sbjct: 428 EVLSDRDDVRIVGDRFVFQ-SEVLFGSGSAQIGEPGKVKLGQFAATLREIAPRIPKNIGW 486
Query: 110 VIAIQSHTDSIGTLKNN----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
++ ++ HTD++ +S RA + YL+ + +S G+ PID
Sbjct: 487 ILQVEGHTDTVPIHNEQFRSNWELSAARAISVVKYLVDQ-GIPAERLSATGYGEYQPIDP 545
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
D + N+RIE+++ R
Sbjct: 546 ADLE----RNRRIEMKLTQR 561
>gi|169839536|ref|ZP_02872724.1| OmpA/MotB domain protein [candidate division TM7 single-cell
isolate TM7a]
Length = 172
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKS 139
V + + + L+ I +ILN+F + + HTDS GT K N +S RA
Sbjct: 60 FKVDGKIINENEISELKEIVSILNEFGESGTVDFIGHTDSTGTKKYNQKLSLTRARNAAR 119
Query: 140 YLIQRGVSSNRFI-SVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ G+ I + G + P+D N+T G+ N+R+EI
Sbjct: 120 LFREFGLKDAISIGEISGKGEEDPVDLNETDQGKYINRRVEIL 162
>gi|71907735|ref|YP_285322.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71847356|gb|AAZ46852.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 183
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/182 (12%), Positives = 52/182 (28%), Gaps = 8/182 (4%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ G+ + + + GC + + S+ E + + G
Sbjct: 9 KWGICILGICWLVGCASPLPVQLEAKPKPVEYLAPTPTVPLSANSSLSMEAHPEPTEKGA 68
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
R + + + + K + +A L S V + H + G+
Sbjct: 69 REIRDDECV-------FFSLGSSTVSNKEKYKIDSLARRLLDDKSLVATLIGHANDNGSS 121
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
NL +S R + L I + + ++ R ++R+E
Sbjct: 122 SFNLAVSDSRVMAVAERLR-NHGVQRSQIRKEVLGSERTPKSCRSEECRLRSRRVEFVFT 180
Query: 184 PR 185
+
Sbjct: 181 KQ 182
>gi|58040218|ref|YP_192182.1| Outer membrane protein [Gluconobacter oxydans 621H]
gi|58002632|gb|AAW61526.1| Outer membrane protein [Gluconobacter oxydans 621H]
Length = 379
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 7/110 (6%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH------TDSIGTLKNNLLISQE 132
+ L + ++ A +T I + + K NL +S
Sbjct: 270 VFFDWDKSDLTGRAREIVAQAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNLGLSNR 329
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA +K+ LI R I + G+ P+ N+R+EI +
Sbjct: 330 RASSVKAELI-RDGVPAAAIDIHGYGESKPLVPTGPNTREPQNRRVEIIL 378
>gi|212635870|ref|YP_002312395.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212557354|gb|ACJ29808.1| OmpA [Shewanella piezotolerans WP3]
Length = 249
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/183 (12%), Positives = 68/183 (37%), Gaps = 8/183 (4%)
Query: 6 GLSMFIMTTISGCGLASRE--KKKVFLHKSNDTDIVNKRFGS----SLDKAEDEFQMQLQ 59
+ ++ G + + K + + +S +++ + +L ++ Q QL
Sbjct: 56 AIIGAFAGSLLGKSVGDDDEIKTQQVMLESKQSELAALNEENQSLIALSSQYEDAQQQLT 115
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + + + V +E F L +A ++ P + + + D
Sbjct: 116 SLKMAQEQKLTELALGLNVQ-FKTGSSTIEPHFQQQLDDVAYAMSLSPELTLDLTGYADR 174
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G N +S++R + +YL+ + +N ++ + + P+ ++R+
Sbjct: 175 RGDGDYNQALSEQRVAEVTNYLVAQ-GVANERLNYQAYGASSPLTAEQNFENDFFDRRVT 233
Query: 180 IQI 182
+++
Sbjct: 234 LKL 236
>gi|219681692|ref|YP_002468078.1| outer membrane protein A precursor [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682247|ref|YP_002468631.1| outer membrane protein A precursor [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471385|ref|ZP_05635384.1| outer membrane protein A precursor [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|219621980|gb|ACL30136.1| outer membrane protein A precursor [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624535|gb|ACL30690.1| outer membrane protein A precursor [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086068|gb|ADP66150.1| outer membrane protein A precursor [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086640|gb|ADP66721.1| outer membrane protein A precursor [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087225|gb|ADP67305.1| outer membrane protein A precursor [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087744|gb|ADP67823.1| outer membrane protein A precursor [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 349
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 12/130 (9%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTL 123
+ + + + L+ L + + + + I + H D IG+
Sbjct: 218 EPLNEQYSVLNENINFPFNSTELKPSSYDKLNKLDDDIKDMQLKNVSIVLLGHADKIGSD 277
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI-------DTNDT--KVGRQN 174
+ N +S++RA IK+YL R S I+V+G YP+ N
Sbjct: 278 EYNQKLSEDRAYSIKNYLASR-GFSRDKITVKGMGKLYPLTNQVCRDVVNKPLLISCLAP 336
Query: 175 NQRIEIQIFP 184
++R+EI++
Sbjct: 337 DRRVEIEVLS 346
>gi|15616938|ref|NP_240151.1| outer membrane protein A precursor [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|11386970|sp|P57414|OMPA_BUCAI RecName: Full=OmpA-like protein; Flags: Precursor
gi|10039003|dbj|BAB13037.1| outer membrane protein A precursor [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 349
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 12/130 (9%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTL 123
+ + + + L+ L + + + + I + H D IG+
Sbjct: 218 EPLNEQYSVLNENINFPFNSTELKPSSYDKLNKLDDDIKDMQLKNVSIVLLGHADKIGSD 277
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI-------DTNDT--KVGRQN 174
+ N +S++RA IK+YL R S I+V+G YP+ N
Sbjct: 278 EYNQKLSEDRAYSIKNYLASR-GFSRDKITVKGMGKLYPLTNQVCRDVVNKPLLISCLAP 336
Query: 175 NQRIEIQIFP 184
++R+EI++
Sbjct: 337 DRRVEIEVLS 346
>gi|322515688|ref|ZP_08068661.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976]
gi|322118233|gb|EFX90525.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976]
Length = 360
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + +N + I + +TD IG +NL +SQ RA
Sbjct: 237 SDVLFAFGKSNLKPAAAQALDAMQAEINNAGLANAAIQVNGYTDRIGKEASNLKLSQRRA 296
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + +S ++ G+ P+ T D GR ++R+E+Q+
Sbjct: 297 ETVANYIVSK-GASAANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 352
>gi|154245935|ref|YP_001416893.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus
Py2]
gi|154160020|gb|ABS67236.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2]
Length = 220
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 59/191 (30%), Gaps = 21/191 (10%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKS--NDTDIVNKRFGSSLDKAEDEFQMQLQD------ 60
+ ++G + + + +S+D L+
Sbjct: 22 LGAALLLAGTAVVPALVGVQPAAAQVFTPNAEIVQGLQTSVDDVPQVSAEALRGLAQAHM 81
Query: 61 -------TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP---STV 110
+ ++ D + V ++ ++ + L IA + P
Sbjct: 82 KYTGPPESRPPLAAQLDQLAQINVEIVFDLNSAMIKPESYRTLGSIADAM-HNPVLLGYK 140
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ +TD+ GT + N+ +SQER+D + L R + G + D
Sbjct: 141 FLVVGNTDATGTRELNMKLSQERSDAVVEALSTTFRVDPRRLQSVGLGEEALQDPKHPDA 200
Query: 171 GRQNNQRIEIQ 181
N+R++I
Sbjct: 201 --AINRRVQIY 209
>gi|242310593|ref|ZP_04809748.1| OmpA/MotB [Helicobacter pullorum MIT 98-5489]
gi|239522991|gb|EEQ62857.1| OmpA/MotB [Helicobacter pullorum MIT 98-5489]
Length = 251
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 71/175 (40%), Gaps = 10/175 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+R +++ + +T K+ S + ++ ++ L + I +
Sbjct: 46 SNNRIQQQADITTDPETTNEVKKIESEIMDFKENTRVSLGPSTI-IDEGSRGFILRFNGK 104
Query: 80 VSFV-SEVFLE-KKFLPMLQLIATILNKFP-STVIAIQSHTDS-----IGTLKNNLLISQ 131
+ F +E L+ + L+ +A IL K P + + + +TD ++NL +S
Sbjct: 105 LLFDKNETTLKNAEEKLFLKRMALILQKMPANMHLDVIGYTDDSQIIPTQKYQDNLGLSA 164
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
RA + LI+ + + I+ G + N T+ + N+R+E + +P
Sbjct: 165 MRALGVARVLIEN-GVNPQKITSLGNGATNFVLPNTTEENKAQNRRVEFRFYPND 218
>gi|83309701|ref|YP_419965.1| Outer membrane protein and related peptidoglycan-associated protein
[Magnetospirillum magneticum AMB-1]
gi|82944542|dbj|BAE49406.1| Outer membrane protein and related peptidoglycan-associated protein
[Magnetospirillum magneticum AMB-1]
Length = 378
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + + +LQ A + I + +HTD G+ K N +S++R +K
Sbjct: 275 VFFDFDKAQITPEAARVLQQAAGAAKTAGAARIDLSAHTDLSGSAKYNQALSEKRGAAVK 334
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +++ I V P+ V N+R+EI +
Sbjct: 335 AQ-LEQLGIPASQIVVVAKGKTSPMVPTPDGVREPQNRRVEIIL 377
>gi|261212910|ref|ZP_05927194.1| hypothetical protein VCJ_003186 [Vibrio sp. RC341]
gi|262402954|ref|ZP_06079514.1| hypothetical protein VOA_000935 [Vibrio sp. RC586]
gi|260837975|gb|EEX64652.1| hypothetical protein VCJ_003186 [Vibrio sp. RC341]
gi|262350453|gb|EEY99586.1| hypothetical protein VOA_000935 [Vibrio sp. RC586]
Length = 217
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/205 (13%), Positives = 67/205 (32%), Gaps = 26/205 (12%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ +F+ +++ A E+ K+ + + S LD+ + + G +
Sbjct: 10 LMMVFLFISVALMRDAVVERDKIKDVAEAYQKTQHAIYVSLLDEFSKDLEK----WGAEI 65
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPST--VIAIQSHTDS 119
R + P + + L ++F +L +L ++ T I I+ HT S
Sbjct: 66 DRDTLSVNFTAPEVLFANGKADLTQQFQIILNDFFPRYLEVLEQYKPTIQEIKIEGHTSS 125
Query: 120 IGTLKNNLLI--------SQERADVI-------KSYLIQRGVSSNRFISVRGFAYKYPID 164
++ SQ R + I ++ G++ +
Sbjct: 126 RWNHDSSDYEAYFNNMGLSQSRTRAVLSYVMAIDKVRINHYGWVKNNVAAVGYSSSKAVI 185
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNIK 189
N + + ++R+ ++ +
Sbjct: 186 KNGLEDEK-RSRRVSFRVITNAEAQ 209
>gi|217973615|ref|YP_002358366.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
gi|217498750|gb|ACK46943.1| OmpA/MotB domain protein [Shewanella baltica OS223]
Length = 276
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 69/184 (37%), Gaps = 6/184 (3%)
Query: 6 GLSMFIMTTISGCGLASRE-----KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ T+ G ++ + ++++ L +S +++ K+ + +E Q D
Sbjct: 83 AIIGAFTGTLIGKSVSDTDTLHVQQRQISLQESQLSELSVKQQAAEKRASEYAKAQQELD 142
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ R +E FLP L +A ++N P + ++ + D
Sbjct: 143 ELLSAQRQLLSELALGLNVQFRTGSSEVESHFLPQLDDVAEVMNLSPELNLELKGYADRR 202
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + N +S++R + + + + ++ + F P+ + ++R+ +
Sbjct: 203 GDVSYNQALSEQRLLEV-RGYLIKQGVAAERMTTQAFGALSPLQAEQDRESDVFDRRVTL 261
Query: 181 QIFP 184
+ P
Sbjct: 262 TLQP 265
>gi|315633444|ref|ZP_07888734.1| lipoprotein PlpD [Aggregatibacter segnis ATCC 33393]
gi|315477486|gb|EFU68228.1| lipoprotein PlpD [Aggregatibacter segnis ATCC 33393]
Length = 273
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ L + + ++ IA L + + + +TD +G+ + NL +SQ RAD +
Sbjct: 142 DFLFDFNKDTLTAQGVEVIDNIAQQLKSAKAKEVTVDGYTDRLGSDRYNLALSQRRADRV 201
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-----KVGRQNNQRIEI 180
K+ L + G+ ++ I G + D K N+R+EI
Sbjct: 202 KARLAELGLKAH--IVAIGHGKANQVKACDGSGQALKDCLAPNRRVEI 247
>gi|261391899|emb|CAX49359.1| outer-membrane protein class 4 [Neisseria meningitidis 8013]
gi|325132932|gb|EGC55609.1| ompA family protein [Neisseria meningitidis M6190]
gi|325138919|gb|EGC61469.1| ompA family protein [Neisseria meningitidis ES14902]
Length = 240
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 25/184 (13%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-----SSLDKAED-- 52
M K+L L ++F+ SG +A + + +IV +G + DKA
Sbjct: 1 MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNYGECWKNAYFDKASQGR 60
Query: 53 ---------------EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ + + I+ F + L + L+
Sbjct: 61 VECGDAVAAPEPEPEPEPAPVVVVEQAPQYVDETISLSAKTLFGF-DKDSLRAEAQDNLK 119
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
++A L + + ++ HTD +G+ K N +S+ RA V+ + L+ GV +R IS G
Sbjct: 120 VLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLVSNGVPVSR-ISAVGL 178
Query: 158 AYKY 161
Sbjct: 179 GESQ 182
>gi|224371704|ref|YP_002605868.1| OmpA3 [Desulfobacterium autotrophicum HRM2]
gi|223694421|gb|ACN17704.1| OmpA3 [Desulfobacterium autotrophicum HRM2]
Length = 196
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 74/197 (37%), Gaps = 17/197 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASRE--------KKKVFLHKSNDTDIVNKRFGSS------ 46
M++ L F + + CG + K + KS IV + +
Sbjct: 1 MVRYSVL-FFCLFFVCACGSKTTVILLPQADGKTGSVVVKSRSDSIVLDKPYTYTMVSND 59
Query: 47 -LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
LD +E+ + + + + + + L K+ L ++ + + +
Sbjct: 60 RLDTSENSIAKERVASEYQNLLASEPVAPVSFIFYFNTGDTSLTKESLDLIPEVLNSVKE 119
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+ I+I HTD+ G N +S ERA+ + +I ++ + I ++ P+
Sbjct: 120 RAPSEISIIGHTDTKGASVYNNKLSLERANKVAK-IITHIDANLKNIYIQFHGENDPLVI 178
Query: 166 NDTKVGRQNNQRIEIQI 182
V + N+R+EI +
Sbjct: 179 TGDNVSEKRNRRVEIMV 195
>gi|261496238|ref|ZP_05992643.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308069|gb|EEY09367.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. OVINE]
Length = 372
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L ++ + I + +TD IG +NL +SQ RA
Sbjct: 249 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRIGKEASNLKLSQRRA 308
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + ++ ++ G+ P+ T D GR ++R+EIQ+
Sbjct: 309 ETVANYIVSK-GTNPANVTAVGYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 364
>gi|163793054|ref|ZP_02187030.1| OmpA/MotB [alpha proteobacterium BAL199]
gi|159181700|gb|EDP66212.1| OmpA/MotB [alpha proteobacterium BAL199]
Length = 373
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 70/177 (39%), Gaps = 19/177 (10%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRIGDMIT 73
SRE ++ +++ ++ +R + AE + ++ + I V + +
Sbjct: 130 SREDEEGTVNQEVVEQLMREREQQQFEDAEAAIKEAIEKSPELSDVAESIKVDSTPEGLR 189
Query: 74 CYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKN 125
+ + + ++ +L +A ++ P+ I I HTDS G+
Sbjct: 190 IQLIDQERIALFPNGSASMYEQTRKLLIKVAEVVAALPN-KIEITGHTDSKQFHPGSTYT 248
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S +RA+ + ++ G+ R V G A + P+ D N+RI I +
Sbjct: 249 NWDLSSDRANASRRVMVANGIDEKRIDEVVGKADRDPLVVEDPSD--PTNRRISIIL 303
>gi|148475218|dbj|BAF63175.1| major outer membrane protein ompAII [Aeromonas veronii]
Length = 332
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/125 (12%), Positives = 48/125 (38%), Gaps = 12/125 (9%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + + L + + + +TD IG+ N +S+ RA
Sbjct: 209 SDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRIGSDAYNQKLSEARA 268
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGRQN-------NQRIEIQIFPR 185
+ +L+ + +++ G P+ ++ G+ ++R+E+++
Sbjct: 269 RTVADFLVGK-GLPAGKVAIEGRGEANPVTGTQCNSVKGKAQLISCLAPDRRVEVRVTGV 327
Query: 186 GNIKK 190
+++
Sbjct: 328 QQVQQ 332
>gi|45758059|gb|AAO85788.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 372
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L ++ + I + +TD IG +NL +SQ RA
Sbjct: 249 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRIGKEASNLKLSQRRA 308
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + ++ ++ G+ P+ T D GR ++R+EIQ+
Sbjct: 309 ETVANYIVSK-GTNPANVTAVGYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 364
>gi|45758055|gb|AAO85786.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 372
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L ++ + I + +TD IG +NL +SQ RA
Sbjct: 249 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRIGKEASNLKLSQRRA 308
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + ++ ++ G+ P+ T D GR ++R+EIQ+
Sbjct: 309 ETVANYIVSK-GTNPANVTAVGYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 364
>gi|261491959|ref|ZP_05988536.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|45758053|gb|AAO85785.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
gi|261312426|gb|EEY13552.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 374
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L ++ + I + +TD IG +NL +SQ RA
Sbjct: 251 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRIGKEASNLKLSQRRA 310
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + ++ ++ G+ P+ T D GR ++R+EIQ+
Sbjct: 311 ETVANYIVSK-GTNPANVTAVGYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 366
>gi|45758065|gb|AAO85791.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 367
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L ++ + I + +TD IG +NL +SQ RA
Sbjct: 244 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRIGKEASNLKLSQRRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + ++ ++ G+ P+ T D GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GTNPANVTAVGYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 359
>gi|45758061|gb|AAO85789.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 373
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L ++ + I + +TD IG +NL +SQ RA
Sbjct: 250 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRIGKEASNLKLSQRRA 309
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + ++ ++ G+ P+ T D GR ++R+EIQ+
Sbjct: 310 ETVANYIVSK-GTNPANVTAVGYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 365
>gi|45758051|gb|AAO85784.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 378
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L ++ + I + +TD IG +NL +SQ RA
Sbjct: 255 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRIGKEASNLKLSQRRA 314
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + ++ ++ G+ P+ T D GR ++R+EIQ+
Sbjct: 315 ETVANYIVSK-GTNPANVTAVGYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 370
>gi|5833214|gb|AAD53408.1|AF133259_1 outer membrane protein PomA [Mannheimia haemolytica]
gi|45758045|gb|AAO85781.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
gi|45758049|gb|AAO85783.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 378
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L ++ + I + +TD IG +NL +SQ RA
Sbjct: 255 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRIGKEASNLKLSQRRA 314
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + ++ ++ G+ P+ T D GR ++R+EIQ+
Sbjct: 315 ETVANYIVSK-GTNPANVTAVGYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 370
>gi|126463592|ref|YP_001044706.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126105256|gb|ABN77934.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 512
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 6/118 (5%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNN 126
D ++ LE + L + +L +F + + +D G K N
Sbjct: 392 ADRLSITFR---FEAGTDSLEPQSRESLSELIKLLEIGRFRGHELMLVGFSDGRGPAKTN 448
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
L +S+ERA+ + + L + V F P+ + T GR+ N+R+E+ + P
Sbjct: 449 LDLSRERAETVAAALRAAVPELGPPL-VESFGEALPLACDTTVAGRRMNRRVELWLRP 505
>gi|312897410|ref|ZP_07756834.1| OmpA family protein [Megasphaera micronuciformis F0359]
gi|310621471|gb|EFQ05007.1| OmpA family protein [Megasphaera micronuciformis F0359]
Length = 397
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + ++P + + +TD+ GT N +S+ R + Y + + + +
Sbjct: 310 LDHFVAVAKEYPHDMFKLVGNTDARGTDAYNDDLSKRRVVNVARYAVD-HGVNPEQLELS 368
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQ 181
P+ TN T GR +N+R++I
Sbjct: 369 YEGKNDPVATNATDQGRADNRRVDIW 394
>gi|251733531|emb|CAR82515.1| pal [Ensifer adhaerens]
gi|251733533|emb|CAR82516.1| pal [Ensifer adhaerens]
gi|251733535|emb|CAR82517.1| pal [Ensifer adhaerens]
Length = 87
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L K+P+ I I+ H D GT + NL + RA + YLI
Sbjct: 2 DSTSIRADAQQTLARQAQWLAKYPNYAITIEGHADERGTREYNLALGARRAASTRDYLIS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
+GV +NR ++ + + P+ D
Sbjct: 62 QGVPANRMKTIS-YGKEKPVAVCDD 85
>gi|307294285|ref|ZP_07574129.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
gi|306880436|gb|EFN11653.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
Length = 358
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + +L + + S + + + D G+ N+ +SQ RAD +K
Sbjct: 250 VFFEWDKSDITPDAATILDNAVSAYSNCGSAQVMLAGYADRSGSASYNVGLSQRRADAVK 309
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+Y+ + + I+ + F P V N+R+EI
Sbjct: 310 AYVASK-GIPDGVITTQAFGEANPRVETADGVRELQNRRVEIT 351
>gi|45758063|gb|AAO85790.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 367
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L ++ + I + +TD IG +NL +SQ RA
Sbjct: 244 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRIGKEASNLKLSQRRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + ++ ++ G+ P+ T D GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GTNPANVTAVGYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 359
>gi|327478801|gb|AEA82111.1| OmpA/MotB domain-containing protein [Pseudomonas stutzeri DSM 4166]
Length = 311
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 62/177 (35%), Gaps = 18/177 (10%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAED--EFQMQLQDT-------GIVVSRIGDMI 72
+ ++ +T R +S + + ++ + V G I
Sbjct: 102 PQRPREETARGEGETPADGTRRYASTAELQALAALMQEVAGQVDALANLEVDVVPQGLRI 161
Query: 73 TCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNN 126
+ L F +L ++A +L+K + + I HTD+ +N
Sbjct: 162 LIKDDQQRFMFQRGSAVLNPHFAKLLAVLAGVLSKVEN-KLIISGHTDATPYRLQSGYDN 220
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S +RA ++ L+ G+ + V A P+ + G N+R+EI +
Sbjct: 221 WNLSGDRALRARNVLVDAGLPGRSVLQVTAQADVMPLRPEAPEDG--ANRRVEILLL 275
>gi|251733507|emb|CAR82503.1| pal [Sinorhizobium saheli]
gi|251733509|emb|CAR82504.1| pal [Sinorhizobium saheli]
gi|251733511|emb|CAR82505.1| pal [Sinorhizobium saheli]
Length = 87
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L K+P+ I I+ H D GT + NL + RA K YL
Sbjct: 2 DSSSIRADAQATLDRQAQWLAKYPNYAITIEGHADERGTREYNLALGARRAAATKEYLAS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RGV +NR ++ + + P+ D
Sbjct: 62 RGVPANRMRTIS-YGKEKPVAVCDD 85
>gi|251733469|emb|CAR82484.1| pal [Rhizobium tropici]
Length = 87
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L ++P+ I ++ H D GT + NL + RA K YL
Sbjct: 2 DSSSIRADASQTLDRQAQWLARYPNYAITVEGHADERGTREYNLALGARRAAATKDYLAS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RGV + R ++ + + P+ T D
Sbjct: 62 RGVPAQRMKTIS-YGKERPVATCDD 85
>gi|190895276|ref|YP_001985569.1| hypothetical protein RHECIAT_PC0000949 [Rhizobium etli CIAT 652]
gi|190700937|gb|ACE95019.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
gi|327193548|gb|EGE60440.1| hypothetical conserved membrane protein [Rhizobium etli CNPAF512]
Length = 441
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTV--IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ- 143
L K F P++ IAT+L + + I I HTD++ +N L + +R ++ I
Sbjct: 336 ELTKGFEPLVASIATVLKQNAELIGGITITGHTDNVPLQASNPLSNNQRLSEARAATIAS 395
Query: 144 ---RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ +G A P+ ND++ GR N+RIEI I R
Sbjct: 396 LLAASGVPAGQLKSQGRAATEPLAGNDSREGRAANRRIEILIQKR 440
>gi|2895292|gb|AAC38192.1| DotK [Legionella pneumophila]
Length = 134
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 2/125 (1%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
L GI V+ +G IP F + L +L IA L +F I + S+
Sbjct: 5 LNKKGIKVASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSY 64
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+ ++K ++ R+ V+ YL + +R I +G PI + R N
Sbjct: 65 SSKYVSVKRERALTLARSRVVSEYLWSQ-GVDSRIIFTQGLGSDKPITSYTLGGDRSPNA 123
Query: 177 RIEIQ 181
R+EI
Sbjct: 124 RVEIT 128
>gi|25298554|pir||E84968 outer membrane protein A precursor [imported] - Buchnera sp.
(strain APS)
Length = 349
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTL 123
+ + + + L+ L + + + + I + H D IG+
Sbjct: 218 EPLNEQYSVLNENINFPFNSTELKPSSYDKLNKLDDDIKDMQLKNVSIVLLGHADKIGSD 277
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI-------DTNDT--KVGRQN 174
+ +S++RA IK+YL R S I+V+G YP+ N
Sbjct: 278 EYXQKLSEDRAYSIKNYLASR-GFSRDKITVKGMGKLYPLTNQVCRDVVNKPLLISCLAP 336
Query: 175 NQRIEIQIFP 184
++R+EI++
Sbjct: 337 DRRVEIEVLS 346
>gi|149911217|ref|ZP_01899841.1| putative outer membrane protein OmpA [Moritella sp. PE36]
gi|149805744|gb|EDM65742.1| putative outer membrane protein OmpA [Moritella sp. PE36]
Length = 327
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ ++ + LQ + T LNK P + + + D+ GT NL +S+ R +
Sbjct: 216 IFDFAKSEVL--LKNDLQQVVTRLNKHPQATVELTGYADAKGTEAFNLTLSKARVKHVSD 273
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
YLI++ I+ P+ NDT R N+ +++ +
Sbjct: 274 YLIEQ-GVKAEQITEHHLGEAEPVIGNDTDEHRHLNRHVQVLL 315
>gi|328545495|ref|YP_004305604.1| flagellar motor protein MotB [polymorphum gilvum SL003B-26A1]
gi|326415236|gb|ADZ72299.1| Flagellar motor protein MotB [Polymorphum gilvum SL003B-26A1]
Length = 434
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 10/135 (7%)
Query: 59 QDTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ I V R G + + + V + + +++ I + L+ P I I+
Sbjct: 302 AASRITVERTGAGLLISLTDDQDFGMFAVGSAEPRPELVRLMERIGSTLSARPG-RIVIR 360
Query: 115 SHTDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
HTD+ +N +S RA + L + GV + R + G+A + +D
Sbjct: 361 GHTDARPFRSKTYDNWRLSSARAHMALYMLARGGVDAGRVERIEGYADRDLKRPSDPYS- 419
Query: 172 RQNNQRIEIQIFPRG 186
N+RIEI + G
Sbjct: 420 -AVNRRIEIFLLEPG 433
>gi|114765236|ref|ZP_01444368.1| OmpA/MotB [Pelagibaca bermudensis HTCC2601]
gi|114542371|gb|EAU45399.1| OmpA/MotB [Roseovarius sp. HTCC2601]
Length = 329
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 67/171 (39%), Gaps = 23/171 (13%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI------------VVSRIGDMITCYI--- 76
++ + +R D+A++ + Q+ + R + + I
Sbjct: 149 ETARAQVAAERAQQEWDEAQERLEQQIMQEVVGSPELESYSDNLRFDRTENGLEIQIVDK 208
Query: 77 -PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQ 131
+ ++ + +L++IA + + P+ + I HTDS+ + +N +S
Sbjct: 209 SGESMFATGSARIQDRTRDLLRIIADAVVELPN-ELTISGHTDSVPYTRAATYSNWELSA 267
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+RA+ + L+ GVS R + G A P++ N+RI + +
Sbjct: 268 DRANATRRVLMANGVSPERITRISGLADTEPLNPGSPDA--PENRRISVTV 316
>gi|54307256|ref|YP_128276.1| hypothetical protein PBPRA0019 [Photobacterium profundum SS9]
gi|46911676|emb|CAG18474.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 290
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ I ++DS G NL IS+ERA+ + + LI+ + I +R +YPI N
Sbjct: 211 KVLIDGYSDSQGRSTVNLRISRERAEEVAALLIE-FGVPQKMIQIRSHGDRYPIADNALA 269
Query: 170 VGRQNNQRIEIQIFPR 185
GR+ N+R+ +++
Sbjct: 270 DGRKKNRRVTVRLIKN 285
>gi|187920655|ref|YP_001889687.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans
PsJN]
gi|187719093|gb|ACD20316.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 329
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 67/184 (36%), Gaps = 20/184 (10%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI----------VVSRIG 69
++ + + T V + L++ + + ++ + I ++ G
Sbjct: 108 AVGKKSQSEPTPPAVTTPSVAPSDATRLEQLKAKLTALIEQSPILKAFKDQIRISITNEG 167
Query: 70 DMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK--- 124
I + + L+ + +L I LN ++I HTD++
Sbjct: 168 LRIEIVDSQNRPMFPSGSSKLQPYAVTILTQIGAALNDV-DNRVSIAGHTDAVPYTAGPE 226
Query: 125 --NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S ERA+ + L+ G+ + + VRG A P+ N N+RI I +
Sbjct: 227 GYSNWELSSERANAARRSLVAGGMHGEKLLQVRGLADVLPL--NSQVADEPTNRRISILV 284
Query: 183 FPRG 186
+
Sbjct: 285 LNKA 288
>gi|294786072|ref|ZP_06751357.1| outer membrane protein [Fusobacterium sp. 3_1_27]
gi|294486294|gb|EFG33659.1| outer membrane protein [Fusobacterium sp. 3_1_27]
Length = 70
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA+ +K+ L++ G+S +R + + + PI TN TK GR N+R+E ++ R ++
Sbjct: 1 RRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRETVQ 58
>gi|84515254|ref|ZP_01002616.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
gi|84510537|gb|EAQ06992.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
Length = 497
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L+ K L +Q + LN + I I TD +G N ++ RA ++
Sbjct: 391 FASGSANLDNKALEDVQRMVDFLNSPAARNREILIIGFTDDVGRFDLNERLALLRAGSVR 450
Query: 139 SYLIQRGV--SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L+ SV + P+ NDT GR++N+R+EI +
Sbjct: 451 NALVTALGGDVLAGRTSVASYGPLAPVGCNDTADGRESNRRVEIWL 496
>gi|226944962|ref|YP_002800035.1| periplasmic phosphate binding protein [Azotobacter vinelandii DJ]
gi|226719889|gb|ACO79060.1| periplasmic phosphate binding protein [Azotobacter vinelandii DJ]
Length = 428
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTV--IAIQSHTDSIGTLKNNLLISQERADVIK 138
L+ K L ++ + L + +A+ D + + L+S+ RA ++
Sbjct: 327 FQEGSALLDNKALRDVERVLAYLREHGKLENSLALVGFGDPKQDPERSTLLSKLRALAVR 386
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L + G + I G P+ N ++ GR N+R+E+ +
Sbjct: 387 RELARGGATFREII---GLGDALPVADNGSEEGRLKNRRVEVWV 427
>gi|251733471|emb|CAR82485.1| pal [Sinorhizobium arboris]
gi|251733473|emb|CAR82486.1| pal [Sinorhizobium arboris LMG 14919]
gi|251733475|emb|CAR82487.1| pal [Sinorhizobium arboris]
Length = 87
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L K+P+ I I+ H D GT + NL + RA + YL+
Sbjct: 2 DSTSIRADAQATLDRQAQWLAKYPNYAITIEGHADERGTREYNLALGARRAAATRDYLVS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RGV NR ++ + + P+ D
Sbjct: 62 RGVPGNRMRTIS-YGKEKPVAVCDD 85
>gi|163854145|ref|YP_001642188.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens
PA1]
gi|163665750|gb|ABY33117.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1]
Length = 717
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 7/140 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT----ILNK 105
+ + + L M + I + L IA +
Sbjct: 565 QKLDRRYTLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKRLSTIAEAINRTIKD 624
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P V I+ +TD++G+ +NL +S RA + S L Q ++ +G+ +Y
Sbjct: 625 NPQEVFLIEGYTDAVGSDIDNLSLSDRRAQSVASVLTQNFQVPPENLTTQGYGEQYLKV- 683
Query: 166 NDTKVGRQNNQRIEI-QIFP 184
+T+ + N+R+ + +I P
Sbjct: 684 -NTQEANRENRRVIVRRITP 702
>gi|153000353|ref|YP_001366034.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
gi|151364971|gb|ABS07971.1| OmpA/MotB domain protein [Shewanella baltica OS185]
Length = 276
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 69/184 (37%), Gaps = 6/184 (3%)
Query: 6 GLSMFIMTTISGCGLASRE-----KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ T+ G ++ + ++++ L +S +++ K+ + +E Q D
Sbjct: 83 AIIGAFTGTLIGKSVSDTDTLHVQQRQISLQESQLSELSVKQQAAEKRASEYAKAQQELD 142
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ R +E FLP L +A ++N P + ++ + D
Sbjct: 143 ELLSAQRQLLSELALGLNVQFRTGSSEVESHFLPQLDDVAEVMNLSPELNLELKGYADRR 202
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + N +S++R + + + + ++ + F P+ + ++R+ +
Sbjct: 203 GDVSYNQALSEQRLLEV-RGYLIKQGVAAERMTTQAFGALSPLQAEQDRESDVFDRRVTL 261
Query: 181 QIFP 184
+ P
Sbjct: 262 TLQP 265
>gi|294784302|ref|ZP_06749596.1| outer membrane protein [Fusobacterium sp. 3_1_27]
gi|294488058|gb|EFG35410.1| outer membrane protein [Fusobacterium sp. 3_1_27]
Length = 71
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ RA+ +K+ L++ G+S +R + + + PI TN TK GR N+R+E ++ R ++
Sbjct: 1 RRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRETVQ 59
>gi|251733529|emb|CAR82514.1| pal [Ensifer adhaerens]
Length = 87
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L K+P+ I I+ H D GT + NL + RA + YL+
Sbjct: 2 DSTSIRADAQQTLARQAQWLAKYPNYAITIEGHADERGTREYNLALGARRAASTRDYLVS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
+GV +NR ++ + + P+ D
Sbjct: 62 QGVPANRMKTIS-YGKEKPVAVCDD 85
>gi|307246787|ref|ZP_07528853.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307251124|ref|ZP_07533047.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|307255770|ref|ZP_07537572.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307260222|ref|ZP_07541930.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306852258|gb|EFM84497.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306856856|gb|EFM88989.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306861233|gb|EFM93225.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306865669|gb|EFM97549.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 364
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T +N + I + +TD IG +NL +SQ RA
Sbjct: 241 SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRIGKEASNLKLSQRRA 300
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ T D GR ++R+E+Q+
Sbjct: 301 ETVANYIVSK-GAPAANVTAVGYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQV 356
>gi|192359644|ref|YP_001981667.1| chemotaxis protein MotB [Cellvibrio japonicus Ueda107]
gi|190685809|gb|ACE83487.1| chemotaxis protein MotB [Cellvibrio japonicus Ueda107]
Length = 333
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 68/180 (37%), Gaps = 20/180 (11%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI------- 76
+ + + + + L + +++ + ++ V +I D I
Sbjct: 105 TQDDQEVTEDKIKREMERIENEQLQELKEQLETEINQLDSVFQQIKDQILIDFTALGLRI 164
Query: 77 ------PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----N 126
+ V L+ +LQ +A IL+K P+ I+I HTD+ N N
Sbjct: 165 QIVDKDQRPMFDVGSANLKTYSKEVLQALAPILDKVPN-KISITGHTDATPYGANATYTN 223
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S +RA+ + +++ N+ +V+G P+ + N+RI I + +
Sbjct: 224 WELSADRANAARRAMLEGSYPENKVATVQGMGSVAPLLVDKPLE--PINRRIAIIVLKKA 281
>gi|254462635|ref|ZP_05076051.1| OmpA/MotB [Rhodobacterales bacterium HTCC2083]
gi|206679224|gb|EDZ43711.1| OmpA/MotB [Rhodobacteraceae bacterium HTCC2083]
Length = 517
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 13/161 (8%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI--------PVHVSFVSEV 86
+ S++K D F + G ++ +
Sbjct: 356 AGFVDQAPEELSINKQGDRFANAISLLGTEINLTEVKRLVKVLSPMKRLSTSFRFRAGSS 415
Query: 87 FLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVI---KSYL 141
L+ + L +Q +A + + + +D G N I+ RA+ +
Sbjct: 416 ALDAQSLSNVQQLARAIETGVYDERSVTFVGFSDGQGPADGNKTIALRRANSVLAAVKKA 475
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ S ISV F P+ +D+ GRQ N+R+EI +
Sbjct: 476 AETVDLSELNISVEAFGEALPMACDDSAWGRQVNRRVEIWV 516
>gi|295677286|ref|YP_003605810.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295437129|gb|ADG16299.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 215
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + V+ HTD IG+ N +S RA +
Sbjct: 99 DALFDFDKAILKPAGKERLSELASKIQGINLEVVVATGHTDRIGSDAYNDRLSLRRAQAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIF 183
K++L+ + I G + P+ T + R ++R+E+++
Sbjct: 159 KAFLVSK-GVEANRIYTEGKGRRNPVTTGCNQKNRKQLIACLAPDRRVEVEVV 210
>gi|58422897|gb|AAW73248.1| OmpA [Citrobacter freundii]
Length = 222
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 115 SDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 174
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN 174
+ YLI + + IS RG P+ N D R
Sbjct: 175 QSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKARAA 215
>gi|313667783|ref|YP_004048067.1| outer membrane protein class 4 (RmpM) [Neisseria lactamica ST-640]
gi|313005245|emb|CBN86678.1| outer membrane protein class 4 (RmpM) [Neisseria lactamica 020-06]
Length = 230
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 79/216 (36%), Gaps = 35/216 (16%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-----SSLDKAEDEF 54
M K+L L ++F+ SG +A + + +IV +G + DKA
Sbjct: 1 MTKQLKLSALFVALLASGTAVAGEAPVQGYTVSGQSHEIVRNNYGECWKNAYFDKASQGR 60
Query: 55 QM--------QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + D + + L + L+++A L +
Sbjct: 61 AECGDAVAAPEPAAVVEQAPQYVDETVSLSAKTLFGFDKDSLRAEAQDNLKVLAQRLAQT 120
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP---- 162
+ ++ HTD +G+ K N +S+ RA+V+ +YL+ GV +++ S G
Sbjct: 121 NVQSVRVEGHTDFMGSEKYNQALSERRANVVANYLVSNGVPASKT-SAAGLGESQAQMTQ 179
Query: 163 -----IDTNDTKVGRQN-----------NQRIEIQI 182
+ K + ++R++++I
Sbjct: 180 VCEAEVAKLGAKASKAKKREALIACIEPDRRVDVKI 215
>gi|312884808|ref|ZP_07744500.1| hypothetical protein VIBC2010_03887 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367460|gb|EFP95020.1| hypothetical protein VIBC2010_03887 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 266
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + L + + I + ++DS G+ NL +S++RA
Sbjct: 149 DLFFASGKSSLSSEQRETLSAFYSYIKVADNINRILVDGYSDSAGSSVVNLQLSRQRAQA 208
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN--IKK 190
YL + I VR +Y + N + G N+R+ +++ + +KK
Sbjct: 209 AADYLQFL-GTEQNLIEVRAHGERYLFNNNASNSG-AKNRRVTLRLVRQDESVVKK 262
>gi|163745061|ref|ZP_02152421.1| OmpA domain protein [Oceanibulbus indolifex HEL-45]
gi|161381879|gb|EDQ06288.1| OmpA domain protein [Oceanibulbus indolifex HEL-45]
Length = 519
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L+ + +Q +A L + + + + +D G + N I+ RA+ ++
Sbjct: 412 FEAGSIRLDAQSRSNVQQLARALEQGQYDARRLMFVGFSDGEGAARANREIALRRAEAVQ 471
Query: 139 SYL---IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ S + V F PI +D++ GRQ N+R+E+ +
Sbjct: 472 RAVSAAAVTANLSRIDLRVDAFGEAMPIACDDSEWGRQANRRVEVWV 518
>gi|157369997|ref|YP_001477986.1| outer membrane protein A [Serratia proteamaculans 568]
gi|157321761|gb|ABV40858.1| OmpA domain protein transmembrane region-containing protein
[Serratia proteamaculans 568]
Length = 358
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 14/119 (11%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + +TD++G+ + N +S++RA
Sbjct: 229 SDVLFNFNKSTLKAEGQQALDQLYTQLSAMDPKDGSAVVLGYTDAVGSDQYNQKLSEKRA 288
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--KVGRQ---------NNQRIEIQI 182
+ YL+ + + IS RG + N K GR ++R+EI++
Sbjct: 289 QSVVDYLVSK-GIPSEKISARGMGEADSVTGNTCGYKAGRATKAQIACLAPDRRVEIEV 346
>gi|296161288|ref|ZP_06844096.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295888446|gb|EFG68256.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 329
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 53/145 (36%), Gaps = 10/145 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + I ++ G I + + L+ +L I LN
Sbjct: 147 EQSPALKAFKDQIRISITNEGLRIEIVDSQNRPMFPSGSSKLQPYAETILTQIGAALNDV 206
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
I+I HTD++ +N +S ERA+ + L+ G+ + + VRG A
Sbjct: 207 -DNRISIAGHTDAVPYTAGPEGYSNWELSSERANAARRALVAGGMHGEKLLQVRGLADVL 265
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRG 186
P+ N N+RI I + +
Sbjct: 266 PL--NSNIADEPTNRRISILVLNKA 288
>gi|237752655|ref|ZP_04583135.1| motility protein MotB [Helicobacter winghamensis ATCC BAA-430]
gi|229376144|gb|EEO26235.1| motility protein MotB [Helicobacter winghamensis ATCC BAA-430]
Length = 233
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 9/144 (6%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLE-KKFLPMLQLIATILNKFPST 109
+E + + + IP + F L + L+ ++ L + P
Sbjct: 77 NEVNRISNGPSVELEEAERGVIIRIPEELLFATGSAELTNPSGIAFLKRLSLELLRMPKA 136
Query: 110 V-IAIQSHTDSIGTLKN-----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
V + HTD++ N NL +S R + L+++G+ NR + G PI
Sbjct: 137 VLVKAIGHTDNVPMRANAVFADNLELSVARGVNVAELLLKQGLEKNRILG-GGEGEFSPI 195
Query: 164 DTNDTKVGRQNNQRIEIQIFPRGN 187
ND R N+R+++ ++ G
Sbjct: 196 ANNDIPALRAKNRRVDLYVYSIGE 219
>gi|89072298|ref|ZP_01158877.1| chemotaxis LafU protein [Photobacterium sp. SKA34]
gi|89051830|gb|EAR57282.1| chemotaxis LafU protein [Photobacterium sp. SKA34]
Length = 331
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 12/145 (8%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLPMLQLIATIL 103
E+ + I + + + L F +L IA I
Sbjct: 134 SVVEETAKQVSAQGNIAIDITPQGLRVTLQDDFKQNMFHRGNANLTPFFEDVLLTIAPIF 193
Query: 104 NKFPSTVIAIQSH-----TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ + I I H + + + N +S RA+V + LI G+ S+R + V G A
Sbjct: 194 KQISN-SIIISGHTDATQFKNRFSRQTNWELSSSRANVARQTLISGGMPSDRVLQVAGMA 252
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIF 183
+ ++ D N+RIE+ +
Sbjct: 253 ERALLNKQDPSA--SENRRIELFVL 275
>gi|251733497|emb|CAR82498.1| pal [Sinorhizobium meliloti]
gi|251733499|emb|CAR82499.1| pal [Sinorhizobium meliloti]
gi|251733501|emb|CAR82500.1| pal [Sinorhizobium meliloti]
Length = 87
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L K+P+ I I+ H D GT + NL + RA + YL+
Sbjct: 2 DSTSIRADAQATLDRQAQWLAKYPNYGITIEGHADERGTREYNLALGARRAAATRDYLVS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RGV NR ++ + + P+ D
Sbjct: 62 RGVPGNRMRTIS-YGKEKPVAVCDD 85
>gi|254427536|ref|ZP_05041243.1| OmpA family protein [Alcanivorax sp. DG881]
gi|196193705|gb|EDX88664.1| OmpA family protein [Alcanivorax sp. DG881]
Length = 212
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 60/208 (28%), Gaps = 27/208 (12%)
Query: 1 MIKELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKRFG-------SSLDKA 50
M K L++ + GC + ++ G S DKA
Sbjct: 1 MKKCNALAVAASCGFLFLGGCAGKVPDDAWPGYRTDGKGQLLKTADGHCWRTADWSEDKA 60
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPV--------HVSFVSEVFLEKKFLPMLQLIATI 102
+ + + P L L+
Sbjct: 61 VPACDVAITGEPVAEREEEPSTAEVAPDIAAPEPLRVTFAFDSAVLTDASRIALKAWYQE 120
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ V+ + ++D +G NL +++ RA + + Q+G ++V G +
Sbjct: 121 VASLEGPVVVVNGYSDPLGGAAYNLALAERRAQAVAQWWRQQGEGIAD-VTVIGHGEDHS 179
Query: 163 IDTNDTKV--------GRQNNQRIEIQI 182
+ + K Q ++R+++ +
Sbjct: 180 VTGDRCKALRGDALKQCHQQDRRVQLLV 207
>gi|148547176|ref|YP_001267278.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148511234|gb|ABQ78094.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 435
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 57/167 (34%), Gaps = 6/167 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ K + + + + + Q RI + + V
Sbjct: 271 ANPKPQAKALADFAQSPAGQAIIAQQGFVSQQIKALSVAPQSDMPPRYRILALQAQRLSV 330
Query: 79 HV-SFVSEVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERAD 135
+ L+ K L +Q +A L + + D T L+S+ RA
Sbjct: 331 NFRFQEGSARLDNKALRDVQRVAEYLRQAGKLQGKAVLVGFGDPKETPGRAALLSRLRAQ 390
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ L + GV + V G + P+ N+ + GR N+R+E+ +
Sbjct: 391 AVRRELARGGV---EVLQVTGMGDELPVAGNEQEQGRLRNRRVEVWV 434
>gi|37704654|gb|AAR01599.1| OprF [Pseudomonas sp. MFY143]
Length = 297
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++LP ++ +A + ++P+T + +TDS+GT NL +SQ RAD +
Sbjct: 212 DVKFDFDKAVVKSQYLPDIKNVAQFMQQYPATSTTVNGYTDSVGTDAYNLKLSQRRADSV 271
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPID 164
+ L+Q+GVS+ R +V G P+
Sbjct: 272 RQALVQQGVSACRVDAV-GHGKADPVA 297
>gi|307566204|ref|ZP_07628655.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
gi|307345097|gb|EFN90483.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
Length = 230
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 15/154 (9%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI---ATILNKF 106
E EF+ L+ V+ + P + ++ L+ +F +L L
Sbjct: 68 LEHEFKDSLKVWNAVIDSTELAVRFQEPSTLFDYNKTDLKPRFAAILHDFFPRYMALLSK 127
Query: 107 PSTV-----IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR-----GVSSNRFISVRG 156
P I I+ HTDS G N+ +SQ+R + ++ + + + I+ G
Sbjct: 128 PQYKDNIEEIRIEGHTDSSGGYIYNMELSQDRTRSVLAFCLNQITRKDFEWAKYAITANG 187
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ +PI D K ++R+E +I R N +K
Sbjct: 188 LSSSHPIIGKDGKEDADRSRRVEFKI--RTNAEK 219
>gi|268590004|ref|ZP_06124225.1| chemotaxis MotB protein [Providencia rettgeri DSM 1131]
gi|291314723|gb|EFE55176.1| chemotaxis MotB protein [Providencia rettgeri DSM 1131]
Length = 305
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 21/173 (12%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMITCYIPVH--VSF 82
+I++ +K ++ + + I + G I + +
Sbjct: 101 PNNIIDGNANYRFEKLKESLEQAILKDPRLNELKPHLLIDMINDGLRIQIVDSENRPMFK 160
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT----DSIGTLKNNLLISQERADVIK 138
V +E +L+ IA +LN P+ I+I HT + G +N +S +RA+ +
Sbjct: 161 VGSATVEPYMRDILRAIAPLLNDVPN-RISISGHTDDLAYANGANYSNWELSSDRANASR 219
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ-NNQRIEIQIFPRGNIKK 190
LI+ G+ N+ + V G A + D + G N+RI I + K+
Sbjct: 220 RELIRGGMDENKVLRVVGMASAIHL---DKEDGFAPINRRISIIVLNDEETKQ 269
>gi|163731712|ref|ZP_02139159.1| hypothetical protein RLO149_20449 [Roseobacter litoralis Och 149]
gi|161395166|gb|EDQ19488.1| hypothetical protein RLO149_20449 [Roseobacter litoralis Och 149]
Length = 344
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 63/177 (35%), Gaps = 30/177 (16%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
V + + L D+ + + G+ VS D + + L
Sbjct: 146 NSSVAQERENLLTSLRDQIAEEFPELGVRVSDGKDALQFQ-GEGLFASGSPRLSAGSQIK 204
Query: 96 LQLIATILNK-----------------FPSTVIA----IQSHTDSIGTLKNNLLISQERA 134
++ IA +++ PS I I+ HTDS G+ N+ +S +RA
Sbjct: 205 IERIADLIHAVLPCYTMGPQSAYDAQCNPSFAIVEALQIEGHTDSDGSANANVSLSSQRA 264
Query: 135 DVIKSYLI--------QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+I + + +SV G+ P+ N + G+ N+RI+++
Sbjct: 265 ATTYGAMISHQPGLNIHQNFTDQPVLSVAGYGEDRPVTLNSSPEGKSANRRIDLRFI 321
>gi|313498243|gb|ADR59609.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 435
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 8/167 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSS--LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
A+ + + L + + + + Q R + V
Sbjct: 271 ANPKPQAKALVDFAQSPAGQAIIAQQGFVSQQIKALSVAPQGDMPPPYRTLARQAQRLSV 330
Query: 79 HV-SFVSEVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERAD 135
+ L+ K L +Q + L + + D T L+S+ RA
Sbjct: 331 NFRFQEGSASLDNKALRDVQRVTEYLRQAGKLQGKAVLVGFGDPKETPGRAALLSRLRAQ 390
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ L + GV + V G + P+ N+ + GR N+R+E+ +
Sbjct: 391 AVRRELARGGV---EVLQVTGMGDELPVAGNELEQGRLRNRRVEVWV 434
>gi|193885364|pdb|3CYP|B Chain B, The Crystal Structure Of The C-Terminal Domain Of
Helicobacter Pylori Motb (Residues 125-256).
gi|193885365|pdb|3CYP|C Chain C, The Crystal Structure Of The C-Terminal Domain Of
Helicobacter Pylori Motb (Residues 125-256).
gi|193885366|pdb|3CYP|D Chain D, The Crystal Structure Of The C-Terminal Domain Of
Helicobacter Pylori Motb (Residues 125-256).
gi|193885367|pdb|3CYP|E Chain E, The Crystal Structure Of The C-Terminal Domain Of
Helicobacter Pylori Motb (Residues 125-256).
gi|193885368|pdb|3CYQ|B Chain B, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885369|pdb|3CYQ|C Chain C, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885370|pdb|3CYQ|D Chain D, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885371|pdb|3CYQ|E Chain E, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885372|pdb|3CYQ|F Chain F, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885373|pdb|3CYQ|G Chain G, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885374|pdb|3CYQ|H Chain H, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885375|pdb|3CYQ|I Chain I, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885376|pdb|3CYQ|A Chain A, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885377|pdb|3CYQ|J Chain J, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885378|pdb|3CYQ|K Chain K, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885379|pdb|3CYQ|L Chain L, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885380|pdb|3CYQ|M Chain M, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885381|pdb|3CYQ|N Chain N, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885382|pdb|3CYQ|O Chain O, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885383|pdb|3CYQ|P Chain P, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|302148709|pdb|3IMP|B Chain B, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148710|pdb|3IMP|C Chain C, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148711|pdb|3IMP|D Chain D, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148712|pdb|3IMP|E Chain E, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148713|pdb|3IMP|A Chain A, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148714|pdb|3IMP|F Chain F, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148715|pdb|3IMP|G Chain G, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148716|pdb|3IMP|H Chain H, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148717|pdb|3IMP|I Chain I, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148718|pdb|3IMP|J Chain J, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148719|pdb|3IMP|K Chain K, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148720|pdb|3IMP|L Chain L, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
Length = 138
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIG----TLKNNLLISQ 131
P + + + + ++ IA I+ K P V I ++ TD K++ ++
Sbjct: 4 PFTFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAA 63
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
RA + LI + + +S + PI ND+ R N R+EI
Sbjct: 64 NRAYRVMKVLI-QYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEI 111
>gi|237752333|ref|ZP_04582813.1| OmpA/MotB [Helicobacter winghamensis ATCC BAA-430]
gi|229375822|gb|EEO25913.1| OmpA/MotB [Helicobacter winghamensis ATCC BAA-430]
Length = 276
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 69/170 (40%), Gaps = 10/170 (5%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
+++ + +T + S++ ++ + L + I + + + F
Sbjct: 74 QQQADITVEPETAEEVRLIESAILDFKENVKTSLGPSNI-IDEGSEGFILRFSGKLLFDE 132
Query: 85 EVFLEKKFLPML--QLIATILNKFPST-VIAIQSHTDSI-----GTLKNNLLISQERADV 136
+L + +A IL K PST + + +TD+ K+++ +S RA
Sbjct: 133 GEITLNDADEVLFLKRLALILQKMPSTLHLDVIGYTDNRTISPTPKFKDDIGLSALRALG 192
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
++ L++ + + ++ G I N TK RQ N+R+E + +P
Sbjct: 193 VERVLLEN-GVNPKKMTALGNGATNFILPNTTKENRQKNRRVEFRFYPND 241
>gi|222086232|ref|YP_002544764.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221723680|gb|ACM26836.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 838
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 6/129 (4%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIA 112
+ + + + + L+ +A I+ K P+
Sbjct: 699 SVNEVRYSARIRDKVRRIDLDTITFATGSAEIPMSQASTLRGVADAIGQIIKKDPTETFL 758
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD++G+ ++NL++S +RA+ + L + +G+ +Y
Sbjct: 759 IEGHTDAVGSAESNLILSDQRAESVAKVLSDVYGVPPENLVAQGYGEQYLKVNTQGPE-- 816
Query: 173 QNNQRIEIQ 181
Q N+R+ I+
Sbjct: 817 QENRRVTIR 825
>gi|165977295|ref|YP_001652888.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190151211|ref|YP_001969736.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303250896|ref|ZP_07337088.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303252762|ref|ZP_07338923.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248928|ref|ZP_07530938.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307253541|ref|ZP_07535410.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307257957|ref|ZP_07539710.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|307264561|ref|ZP_07546144.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|165877396|gb|ABY70444.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|189916342|gb|ACE62594.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302648412|gb|EFL78607.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302650246|gb|EFL80410.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306854539|gb|EFM86732.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306858989|gb|EFM91033.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306863504|gb|EFM95434.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306870090|gb|EFN01851.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 364
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T +N + I + +TD IG +NL +SQ RA
Sbjct: 241 SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRIGKEASNLKLSQRRA 300
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + + ++ G+ P+ T D GR ++R+E+Q+
Sbjct: 301 ETVANYIVSK-GAPAANVTAVGYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQV 356
>gi|58422905|gb|AAW73252.1| OmpA [Salmonella sp. CDC 156-87]
Length = 226
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + L+ + + TD IG+ N +S++RA
Sbjct: 119 SDVLFNFNKSTLKPEGQQALDQLYNQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 178
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ YLI + + IS RG P+ N
Sbjct: 179 QSVVDYLISK-GIPSDKISARGMGESNPVTGNT 210
>gi|323492326|ref|ZP_08097479.1| chemotaxis LafU protein [Vibrio brasiliensis LMG 20546]
gi|323313373|gb|EGA66484.1| chemotaxis LafU protein [Vibrio brasiliensis LMG 20546]
Length = 330
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 58/181 (32%), Gaps = 22/181 (12%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAE----------DEFQMQLQDTGIVVSRIGDM 71
S F D + + D E + + + V+
Sbjct: 98 STHTVNSFFDGDGDGPETDSLIPGTFDTQERLAALAKVIEEAVRQSSAQGNVNVTVTPQG 157
Query: 72 ITCYIPVHV----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL---- 123
+ + L F +L +A + + + I I HTDS
Sbjct: 158 LRVVLQDDYKQHMFSRGGAELTPFFEDLLLALAPVFKRVVN-PIIISGHTDSTQFKHRFK 216
Query: 124 -KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S RA+V + L+ G+ R + V G + + + ND N+RIE+ +
Sbjct: 217 QASNWELSASRANVARVTLVSGGMPDERVLQVTGMSDRALL-NNDDPES-SENRRIELFV 274
Query: 183 F 183
Sbjct: 275 L 275
>gi|327479120|gb|AEA82430.1| outer membrane protein [Pseudomonas stutzeri DSM 4166]
Length = 187
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 53/187 (28%), Gaps = 17/187 (9%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ M + GC S + V LD + VS
Sbjct: 5 LLLAMAALGGCAQHSY--VMLADDSGGRGAAVLGDEQRVLDMPGQGMAIAPGGQAFAVSD 62
Query: 68 IGDMITCY--------IPVHVSFV--SEVFLEKKFLPMLQLI--ATILNKFPSTVIAIQS 115
+ +P +F L+ +L + A +P V+ +
Sbjct: 63 MQRKADFAKALSAQPALPERFTFHLAPSGELDAGAEQLLDSVLLAARRRDYP--VVTVIG 120
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD++G N + RA + L R + V + + N
Sbjct: 121 HTDTLGHRAANEQVGMRRAQRMAELLRAR-GLEAMELRVESHGERNLLVATPDATAEPRN 179
Query: 176 QRIEIQI 182
+R+E+ +
Sbjct: 180 RRVEVLV 186
>gi|260220763|emb|CBA28654.1| hypothetical protein Csp_A08220 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 182
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 56/166 (33%), Gaps = 6/166 (3%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV- 80
V + + + + + ++ + + + QL + V R G ++ V
Sbjct: 17 DGRATAVQVQSAAGVVDLTQPYQTAALQRDGRLEAQLSNAEEVSKRHGAVLALPFLPPVR 76
Query: 81 ----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L L I I + HTD G+ + N +S +RA
Sbjct: 77 FTLQFEPGTSTLTPDSQNQLPGILEQATARAGGDIQVVGHTDRTGSPQANDTLSLQRAQA 136
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+++ L+ + + G + P+ + V N+R EI I
Sbjct: 137 VRN-LLIQRGFEPALVEAIGRGEREPVVPTEANVNEPRNRRAEIII 181
>gi|114327495|ref|YP_744652.1| outer membrane protein [Granulibacter bethesdensis CGDNIH1]
gi|114315669|gb|ABI61729.1| outer membrane protein [Granulibacter bethesdensis CGDNIH1]
Length = 149
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ LP+L++ T P I + +TD +G+ K+N +S+ERAD I+
Sbjct: 51 FFAPDASQPKTDSLPILKVAVTYAKDHPDQNIIVVGYTDPVGSAKDNHDLSEERADTIRK 110
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
LI + I+ RG P + Q ++R+EI+
Sbjct: 111 DLI-KAGIPQARITARGHGQTQP------EWNNQESRRVEIR 145
>gi|30250467|ref|NP_842537.1| outer membrane protein [Nitrosomonas europaea ATCC 19718]
gi|30139308|emb|CAD86460.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718]
Length = 231
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L A L +I +TD IG+ N +S +RA+ +
Sbjct: 111 DALFDFDKAVLKPAGKQALDDFAANLEGVNYDLIIAVGYTDRIGSEAYNKNLSIKRAEAV 170
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTND---TKVGRQN------NQRIEIQI 182
KSYL+ + + I G P+ + TK R ++R+EI++
Sbjct: 171 KSYLVSK-GIGSDRIFTDGKGEANPVTGDSCHGTKATRALIDCLAPDRRVEIEV 223
>gi|254805583|ref|YP_003083804.1| class 4 outer membrane protein [Neisseria meningitidis alpha14]
gi|254669125|emb|CBA07752.1| class 4 outer membrane protein [Neisseria meningitidis alpha14]
Length = 242
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 27/186 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-----SSLDKAED-- 52
M K+L L ++F+ SG +A + + +IV +G + DKA
Sbjct: 1 MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNYGECWKNAYFDKASQGR 60
Query: 53 -----------------EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ + + I+ F + L +
Sbjct: 61 VECGDAVAAPEPEPEPEPVPAPVVVVEQAPQYVDETISLSAKTLFGF-DKDSLRAEAQDN 119
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L+++A L++ + ++ HTD +G+ K N +S+ RA V+ + L+ GV +R IS
Sbjct: 120 LKVLAQRLSRTNVQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLVSNGVPVSR-ISAV 178
Query: 156 GFAYKY 161
G
Sbjct: 179 GLGESQ 184
>gi|85859043|ref|YP_461245.1| chemotaxis protein [Syntrophus aciditrophicus SB]
gi|85722134|gb|ABC77077.1| chemotaxis protein [Syntrophus aciditrophicus SB]
Length = 254
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 10/134 (7%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
Q ++VS + + + I + + K +L++++ L P+ I
Sbjct: 121 QTLKDQVMVSIVDNGLKIQIVDKEGSLMFPLGSAEPTFKAKEILRIVSENLKDSPN-RII 179
Query: 113 IQSHTDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
++ HTD+ N +S RA + L + R V G+A + +
Sbjct: 180 VEGHTDAAPFRSAQTTNWELSTARASAARRELENNSIDPGRIARVIGYADQELFIPQNPM 239
Query: 170 VGRQNNQRIEIQIF 183
R N+RI I +
Sbjct: 240 DAR--NRRISIIVI 251
>gi|15676296|ref|NP_273431.1| outer membrane protein class 4 [Neisseria meningitidis MC58]
gi|304386635|ref|ZP_07368919.1| outer membrane protein class 4 [Neisseria meningitidis ATCC 13091]
gi|60416397|sp|P0A0V3|OMP4_NEIMB RecName: Full=Outer membrane protein class 4; Flags: Precursor
gi|7225603|gb|AAF40822.1| outer membrane protein class 4 [Neisseria meningitidis MC58]
gi|304339285|gb|EFM05361.1| outer membrane protein class 4 [Neisseria meningitidis ATCC 13091]
gi|316984886|gb|EFV63842.1| ompA family protein [Neisseria meningitidis H44/76]
gi|325128875|gb|EGC51731.1| ompA family protein [Neisseria meningitidis N1568]
gi|325141028|gb|EGC63534.1| ompA family protein [Neisseria meningitidis CU385]
gi|325199575|gb|ADY95030.1| ompA family protein [Neisseria meningitidis H44/76]
gi|325203490|gb|ADY98943.1| ompA family protein [Neisseria meningitidis M01-240355]
Length = 242
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 27/186 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-----SSLDKAED-- 52
M K+L L ++F+ SG +A + + +IV +G + DKA
Sbjct: 1 MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNYGECWKNAYFDKASQGR 60
Query: 53 -----------------EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ + + I+ F + L +
Sbjct: 61 VECGDAVAAPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAKTLFGF-DKDSLRAEAQDN 119
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L+++A L++ + ++ HTD +G+ K N +S+ RA V+ + L+ GV +R IS
Sbjct: 120 LKVLAQRLSRTNVQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLVSNGVPVSR-ISAV 178
Query: 156 GFAYKY 161
G
Sbjct: 179 GLGESQ 184
>gi|126174068|ref|YP_001050217.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|125997273|gb|ABN61348.1| OmpA/MotB domain protein [Shewanella baltica OS155]
Length = 276
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 75/184 (40%), Gaps = 6/184 (3%)
Query: 6 GLSMFIMTTISGCGLASRE-----KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ T+ G ++ + ++++ L +S +++ K+ + +E Q D
Sbjct: 83 AIIGAFTGTLIGKSVSDTDTLHVQQRQISLQESQLSELSVKQQAAEKRASEYAKAQQDLD 142
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ R +E FLP L +A ++N P + ++ + D
Sbjct: 143 ELLSAQRQLLSELALGLNVQFRTGSSEVESHFLPQLDDVAEVMNLSPELNLELKGYADRR 202
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + N +S++R ++ YLI +GV++ R + + F P+ + ++R+ +
Sbjct: 203 GDVSYNQALSEQRLLEVRGYLIMQGVAAERM-TTQAFGALSPLQAEQDRESDVFDRRVTL 261
Query: 181 QIFP 184
+ P
Sbjct: 262 TLQP 265
>gi|90419554|ref|ZP_01227464.1| conserved hypothetical protein, OmpA family [Aurantimonas
manganoxydans SI85-9A1]
gi|90336491|gb|EAS50232.1| conserved hypothetical protein, OmpA family [Aurantimonas
manganoxydans SI85-9A1]
Length = 388
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPML----QLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + ++ + L IA ++ + P I+ HTD++G+ + NL
Sbjct: 264 RIDLSTINFNFGSAEITQEEVGDLRALADAIARVIAENPDETFLIEGHTDAVGSERANLA 323
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
+S RAD + + L Q + +G+ + DT+ + N+R+ + +I P
Sbjct: 324 LSDRRADGVATALTQYFDVPPENLVTQGYGEQDLKV--DTQAENRENRRVTVRRITP 378
>gi|83749098|ref|ZP_00946103.1| Outer membrane protein [Ralstonia solanacearum UW551]
gi|83724219|gb|EAP71392.1| Outer membrane protein [Ralstonia solanacearum UW551]
Length = 218
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 9/114 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ L+ + L + + L V+ HTDS G+ K N +S RA+ +
Sbjct: 100 DALFDFNKAVLKPEGKAKLDDLVSKLKNITLKVVIAVGHTDSFGSDKYNDRLSVRRAEAV 159
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--------KVGRQNNQRIEIQIF 183
K YL+ + + G + + +Q N+R+E+++
Sbjct: 160 KGYLVSK-GIEANRVYTEGKGKRQLKVDPKSCKGARKAQIACQQPNRRVEVEVV 212
>gi|114320611|ref|YP_742294.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227005|gb|ABI56804.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 324
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 2/126 (1%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ-S 115
+ TG + L + L A P + +
Sbjct: 197 ETAGTGAPDDDTVPLPAAPGATVYFGFDHAGLTRTAKDALARFANQAGDDPHLQVIVAVG 256
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTDS G N + RA+ +++ + R ++ I +R + P D GR N
Sbjct: 257 HTDSAGPADYNERLGARRAEAVRAE-LMRRGIADERIRLRSLGERQPAMAEDDGYGRAAN 315
Query: 176 QRIEIQ 181
+R+E++
Sbjct: 316 RRVEVR 321
>gi|251733455|emb|CAR82477.1| pal [Rhizobium huautlense]
Length = 87
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L ++P+ I ++ H D GT + NL + RA K YL
Sbjct: 2 DSTSIRADAQQTLDRQAQWLQRYPNYAITVEGHADERGTREYNLALGARRAAATKEYLAS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RGV +NR ++ + + P+ D
Sbjct: 62 RGVPANRMKTIS-YGKERPVAVCDD 85
>gi|300776671|ref|ZP_07086529.1| OmpA family protein [Chryseobacterium gleum ATCC 35910]
gi|300502181|gb|EFK33321.1| OmpA family protein [Chryseobacterium gleum ATCC 35910]
Length = 886
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 9/133 (6%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G+ + + + ++K +L + L + + + + +
Sbjct: 301 NGNGVKLIKSAALQEHIQRTIYYKFDSTVIDKDGEAVLNNVLKFLLEHKDSTMNLSGYAC 360
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--------DTKV 170
IG N +SQ+RADV+K + G+ R ISV G P D +
Sbjct: 361 VIGKENYNKGLSQKRADVVKKFFADGGLDPRRIISV-GKGEVDPTDDKMGRDNIKYKNEK 419
Query: 171 GRQNNQRIEIQIF 183
+NN+R++I
Sbjct: 420 DYENNRRVDISFI 432
>gi|37525710|ref|NP_929054.1| outer membrane protein A [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36785139|emb|CAE14068.1| Outer membrane protein A precursor (Outer membrane protein II*)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 368
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 14/125 (11%)
Query: 70 DMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNN 126
+ + V F L+ + L + T L + + +TD IG N
Sbjct: 230 ENKRFTLRSDVLFEFASSELKAEGKHNLDQLYTELANIDPNQGKVLVLGYTDRIGKDVYN 289
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV---------GRQNNQR 177
+SQ+RA + YL+ + + IS G P+ T T ++R
Sbjct: 290 QKLSQKRAQSVVDYLVSK-GIPSGSISAEGHGKANPV-TGSTCDKVHKPNLINCLAPDRR 347
Query: 178 IEIQI 182
+EI+I
Sbjct: 348 VEIEI 352
>gi|89076293|ref|ZP_01162634.1| hypothetical protein SKA34_22947 [Photobacterium sp. SKA34]
gi|89047997|gb|EAR53586.1| hypothetical protein SKA34_22947 [Photobacterium sp. SKA34]
Length = 261
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 3/147 (2%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
N +D E LQ V + + +++ L K+ L
Sbjct: 94 QTQNAVIQQQMDWLEYHTL-CLQPNYSEVELKERFLLYMEVDNQFALNKTTLLPKYQESL 152
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ A IL + + + +TDS G ++ N ++ ERA+ +K +LI+ ISV
Sbjct: 153 RYAAEILKRQSHWHLQLTGYTDSQGHIQGNYMLGLERANAVKDFLIEN-GVDTNQISVFS 211
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ N T + NN+++E ++
Sbjct: 212 VGENQAVADN-TLTKQLNNRKVEARVL 237
>gi|304383452|ref|ZP_07365915.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
gi|304335416|gb|EFM01683.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
Length = 380
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKFLPMLQLIATIL 103
S+ D+ E Q L + + + P + + ++ ++LIAT +
Sbjct: 241 SAKDRQIAELQSALDECNKKPKYVKPATVTNLQPTVLFRQGKADIDPAQYAPIELIATYM 300
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
K PS V+ I+ + G + N +S RA+ +K+ LI++ + + +G
Sbjct: 301 KKNPSAVVEIKGYASPEGNPELNQKLSDARAEAVKNALIKKYKIAANRLITKGMG 355
>gi|121635480|ref|YP_975725.1| outer membrane protein class 4 [Neisseria meningitidis FAM18]
gi|161870687|ref|YP_001599860.1| outer membrane protein class 4 [Neisseria meningitidis 053442]
gi|218768845|ref|YP_002343357.1| outer membrane protein class 4 [Neisseria meningitidis Z2491]
gi|60392859|sp|P0A0V2|OMP4_NEIMA RecName: Full=Outer membrane protein class 4; Flags: Precursor
gi|120867186|emb|CAM10954.1| outer membrane protein class 4 [Neisseria meningitidis FAM18]
gi|121052853|emb|CAM09205.1| outer membrane protein class 4 [Neisseria meningitidis Z2491]
gi|161596240|gb|ABX73900.1| outer membrane protein class 4 [Neisseria meningitidis 053442]
gi|254670228|emb|CBA05418.1| outer membrane protein class 4 [Neisseria meningitidis alpha153]
gi|254672496|emb|CBA05992.1| outer membrane protein class 4 [Neisseria meningitidis alpha275]
gi|308388587|gb|ADO30907.1| outer membrane protein class 4 [Neisseria meningitidis alpha710]
gi|319411080|emb|CBY91483.1| outer-membrane protein class 4 [Neisseria meningitidis WUE 2594]
gi|325142982|gb|EGC65338.1| ompA family protein [Neisseria meningitidis 961-5945]
gi|325198932|gb|ADY94388.1| ompA family protein [Neisseria meningitidis G2136]
gi|325208795|gb|ADZ04247.1| ompA family protein [Neisseria meningitidis NZ-05/33]
Length = 242
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 68/186 (36%), Gaps = 27/186 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-----SSLDKAED-- 52
M K+L L ++F+ SG +A + + +IV +G + DKA
Sbjct: 1 MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNYGECWKNAYFDKASQGR 60
Query: 53 -----------------EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ + + I+ F + L +
Sbjct: 61 VECGDAVAAPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAKTLFGF-DKDSLRAEAQDN 119
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L+++A L + + ++ HTD +G+ K N +S+ RA V+ + L+ GV +R IS
Sbjct: 120 LKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLVSNGVPVSR-ISAV 178
Query: 156 GFAYKY 161
G
Sbjct: 179 GLGESQ 184
>gi|126461359|ref|YP_001042473.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126103023|gb|ABN75701.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 701
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 6/114 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPML----QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ ++ L Q IA ++ + P V I+ HTD++G +NL +
Sbjct: 581 IDVDQITFDTGSAAIDPDEAEKLASLGQTIADMIAERPEEVFLIEGHTDAVGDAASNLAL 640
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S RA+ + L + + V+G+ + +D R N+R+ +++
Sbjct: 641 SDRRAESVALALTEYFDVPPENMVVQGYGEEDLRVDSDGPEQR--NRRVAVRLI 692
>gi|91974956|ref|YP_567615.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91681412|gb|ABE37714.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 697
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + LQ IA LN+ P V I+ HTD+ G +NL +
Sbjct: 564 IDLNTITFELGSWDISPDQASKLQAIADGLNRSISRNPREVFLIEGHTDATGNDTDNLSL 623
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA+ + L Q+ ++ +G+ +Y +D + N+R+ + +I P
Sbjct: 624 SDRRAESAAALLTQQFAVPAENLTSQGYGEQYLKVQSDGPE--RQNRRVTVRRITP 677
>gi|317491635|ref|ZP_07950071.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316921182|gb|EFV42505.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 329
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 20/177 (11%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ--------DTGIVVSRIGDMITCYIP 77
+K + D K L K + + ++++ + + + I
Sbjct: 93 QKEGEVAKSMPDPATKADSERLKKLRKQIDQLILTDPRLKALQPHLLINMMDEGLRIQII 152
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLL 128
+ +E +L+ IA ILN P+ I++ HTD + +N
Sbjct: 153 DSQNRPMFENGSARVEPYMRDILRAIAPILNDVPN-KISLSGHTDDLPYASGERGYSNWE 211
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S +RA+ + LI G++ + + V G A + + + N+RI I + +
Sbjct: 212 LSADRANASRRELIAGGLAEGKILRVVGMADTMSLKSQTSDA--AINRRISILVLNK 266
>gi|296448590|ref|ZP_06890462.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
gi|296253908|gb|EFH01063.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
Length = 454
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
I + L +IAT LN+ PS V ++ HTD+ G+ +NL +
Sbjct: 328 VDIDTITFDSGSWTVAPDQAQRLSVIATALNQAIRNNPSEVFLVEGHTDATGSDVDNLSL 387
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA + + L + ++ +G+ +YP + N+R+ + +I P
Sbjct: 388 SDRRAQSVATLLTRDFDVPAENLTTQGYGEQYPKVDVQGPS--RENRRVTVRRITP 441
>gi|32034275|ref|ZP_00134486.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209314|ref|YP_001054539.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae L20]
gi|126098106|gb|ABN74934.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 364
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T +N + I + +TD IG +NL +SQ RA
Sbjct: 241 SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRIGKEASNLKLSQRRA 300
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ +G + ++ G+ P+ T D GR ++R+E+Q+
Sbjct: 301 ETVANYIVSKGALAAN-VTAVGYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQV 356
>gi|312115287|ref|YP_004012883.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
gi|311220416|gb|ADP71784.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
Length = 358
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 68/166 (40%), Gaps = 7/166 (4%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A+ + + ++ + + K S F++Q+ G+ +
Sbjct: 192 SANVAETERKEPAASLAEQILKDIESFQSNLPQSFRVQVSVAGVA-EGTLISLMDDTKRS 250
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI---GTLKNNLLISQERADV 136
+ V + + ++ I I++K+P I I+ +TD G N ++S +RA +
Sbjct: 251 MFDVGSAMPKPDTVLVMTRIGDIISKYPG-KIIIRGYTDGRPFAGDRYGNWVLSSQRARM 309
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L + + R +S+ G+A + P + +D N+RIE+ +
Sbjct: 310 AFLMLARGKIGDGRVLSIEGYADRQPRNADDPLA--PENRRIEVLL 353
>gi|260429564|ref|ZP_05783541.1| OmpA/MotB [Citreicella sp. SE45]
gi|260420187|gb|EEX13440.1| OmpA/MotB [Citreicella sp. SE45]
Length = 517
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 8/160 (5%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ ++ R +++ AE E + L + +T V
Sbjct: 360 DQAPEELALNLQGDRLANAIAVAEGEGGLALLQHMVTALAPMRRLTTSFR---FEPGSVR 416
Query: 88 LEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK---SYLI 142
L+ + +Q +A L ++ + +D G NL I+++RAD ++
Sbjct: 417 LDAQSRSNVQQLARSLEAGEYDGRELVFVGFSDGQGDADANLEIARKRADAVRTAVEQAA 476
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++ F P+ +DT GRQ N+R+E+ +
Sbjct: 477 EAADLDRIGMATEAFGEAMPMACDDTVWGRQVNRRVEVWV 516
>gi|251733491|emb|CAR82495.1| pal [Sinorhizobium medicae]
gi|251733493|emb|CAR82496.1| pal [Sinorhizobium medicae]
gi|251733495|emb|CAR82497.1| pal [Sinorhizobium medicae]
Length = 87
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L K+P+ + I+ H D GT + NL + RA + YL+
Sbjct: 2 DSTSIRADAQTTLDRQAQWLAKYPNYAVTIEGHADERGTREYNLALGARRAAATRDYLVS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RGV NR ++ + + P+ D
Sbjct: 62 RGVPGNRMRTIS-YGKEKPVAVCDD 85
>gi|77462481|ref|YP_351985.1| OmpA/MotB family outer membrane protein [Rhodobacter sphaeroides
2.4.1]
gi|77386899|gb|ABA78084.1| Outer membrane protein, OmpA/MotB family [Rhodobacter sphaeroides
2.4.1]
Length = 701
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 6/114 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPML----QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ ++ L Q IA ++ + P V I+ HTD++G +NL +
Sbjct: 581 IDVDQITFDTGSAAIDPDEAEKLASLGQTIADMIAERPEEVFLIEGHTDAVGDAASNLAL 640
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S RA+ + L + + V+G+ + +D R N+R+ +++
Sbjct: 641 SDRRAESVALALTEYFDVPPENMVVQGYGEEDLRVDSDGPEQR--NRRVAVRLI 692
>gi|254780547|ref|YP_003064960.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62]
gi|254040224|gb|ACT57020.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62]
Length = 160
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Query: 69 GDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + + V F + + + + +L + + L K I+ H D +G+ +++
Sbjct: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSI 99
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ RA + +Y + RG+S++R V + + P + N+R
Sbjct: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRR 148
>gi|171059315|ref|YP_001791664.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170776760|gb|ACB34899.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 271
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
LE+ +P++ IA + + + I+ H D+ G N +S+ RA + +
Sbjct: 165 FKPGSAQLEQAAMPVVHQIAALAQRCSRWRVIIEGHADTSGDPVQNERLSRRRAAAVAAA 224
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+I GV ++ SV G PI + N+RIE +
Sbjct: 225 MILEGVPLDQIESV-GRGASRPIAASSDAQASVKNRRIEFHL 265
>gi|149178718|ref|ZP_01857301.1| hypothetical protein PM8797T_01394 [Planctomyces maris DSM 8797]
gi|148842416|gb|EDL56796.1| hypothetical protein PM8797T_01394 [Planctomyces maris DSM 8797]
Length = 242
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 8/172 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G + ++S + G + E + + G +T
Sbjct: 62 GTAAVPGKSLDPTSNQSKPASKGSSSDGGTKTGKEKSSGGGGPNKTVERINTGTEVTLG- 120
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN-----LLISQ 131
L + L +IA IL P+ +I ++ H K++ +S
Sbjct: 121 GAACFGRFSAELTPEIKQKLDIIAEILLPTPNRLI-VRGHASPEPLPKDSKFLDSQELSF 179
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + YL +G+ R I V P + N+R+++ +
Sbjct: 180 YRAKNVAEYLESKGIEPERLI-VSSVGDAEPRTITRNPEEQYLNRRVDVFLI 230
>gi|89067386|ref|ZP_01154899.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
gi|89046955|gb|EAR53009.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
Length = 485
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L+ + L +A + + + TD IG N + ERAD +
Sbjct: 378 FGRGATELDPQSRTNLFQLAADIRDGAHDGQTLLLLGFTDGIGPASANRRLGAERADEVL 437
Query: 139 SYLIQRGV---SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L+ + GF P+ +DT+ GRQ N+R+E+ +
Sbjct: 438 ATLLAALGGALPEGVEVRTEGFGEALPMGCDDTEWGRQINRRVELWV 484
>gi|163793574|ref|ZP_02187549.1| OmpA/MotB [alpha proteobacterium BAL199]
gi|159181376|gb|EDP65891.1| OmpA/MotB [alpha proteobacterium BAL199]
Length = 293
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
V L + L + I+ + + I HTD +G N ++ RA++++
Sbjct: 191 YFEVGGNVLTPESQASLPTLLEIIRQRVLPGVEIAGHTDRVGASSVNDALALRRAELVQQ 250
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ S R I V F + P+ V N+R+EI +
Sbjct: 251 MMLDL-GISRRLIRVDSFGERDPVVPTADGVDEPRNRRVEITV 292
>gi|330830631|ref|YP_004393583.1| major outer membrane protein ompAII [Aeromonas veronii B565]
gi|328805767|gb|AEB50966.1| Major outer membrane protein ompAII [Aeromonas veronii B565]
Length = 333
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 49/125 (39%), Gaps = 12/125 (9%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + + L + + + +TD IG+ NL +S+ RA
Sbjct: 210 SDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRIGSDAYNLKLSEARA 269
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGRQN-------NQRIEIQIFPR 185
+ +L+ + +++ G P+ ++ G+ ++R+E+++
Sbjct: 270 RTVADFLVGK-GLPAGKVAIEGRGEANPVTGTQCNSVKGKAQLISCLAPDRRVEVRVTGV 328
Query: 186 GNIKK 190
+++
Sbjct: 329 QQVQQ 333
>gi|261401169|ref|ZP_05987294.1| OmpA family protein [Neisseria lactamica ATCC 23970]
gi|269208842|gb|EEZ75297.1| OmpA family protein [Neisseria lactamica ATCC 23970]
gi|309379032|emb|CBX22334.1| reduction-modifiable protein of the meningococcus [Neisseria
lactamica Y92-1009]
Length = 230
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 79/216 (36%), Gaps = 35/216 (16%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-----SSLDKAEDEF 54
M K+L L ++F+ SG +A + + +IV +G + DKA
Sbjct: 1 MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSHEIVRNNYGECWKNAYFDKASQGR 60
Query: 55 QM--------QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + D + + L + L+++A L +
Sbjct: 61 AECGDAVAAPEPAAVVEQAPQYVDETVSLSAKTLFGFDKDSLRAEAQDNLKVLAQRLAQT 120
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP---- 162
+ ++ HTD +G+ K N +S+ RA+V+ +YL+ GV +++ S G
Sbjct: 121 NVQSVRVEGHTDFMGSEKYNQALSERRANVVANYLVSNGVPASKT-SAAGLGESQAQMTQ 179
Query: 163 -----IDTNDTKVGRQN-----------NQRIEIQI 182
+ K + ++R++++I
Sbjct: 180 VCEAEVAKLGAKASKAKKREALIACIEPDRRVDVKI 215
>gi|167623666|ref|YP_001673960.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167353688|gb|ABZ76301.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 245
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 58/142 (40%), Gaps = 2/142 (1%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
L ++ Q QL + + + + V +E F L IA ++
Sbjct: 101 ELSDQYEQAQQQLTSLKMAQEQKLTELALGLNVQ-FKTGSSTIEPHFQNQLNDIAYAMSL 159
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P + + + D G N +S++R +K+YLI++GV+ R + + + P+
Sbjct: 160 SPELTLDLTGYADRRGDGDYNQALSEQRVAEVKNYLIEQGVAEARLHN-QAYGDSSPLMA 218
Query: 166 NDTKVGRQNNQRIEIQIFPRGN 187
+ ++R+ +++ + +
Sbjct: 219 EQSFENDFFDRRVTLKLQNQES 240
>gi|17545619|ref|NP_519021.1| signal peptide protein [Ralstonia solanacearum GMI1000]
gi|17427912|emb|CAD14602.1| putative outer membrane signal peptide protein [Ralstonia
solanacearum GMI1000]
gi|299066867|emb|CBJ38062.1| putative outer membrane protein, ompA domain [Ralstonia
solanacearum CMR15]
Length = 218
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ + L + + L V+ HTDS G+ K N +S RA+ +
Sbjct: 100 DALFDFDKAVLKPEGKSKLDDLVSKLKGITLEVVIAVGHTDSFGSDKYNDRLSVRRAEAV 159
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--------KVGRQNNQRIEIQIF 183
K YL+ + + G + + +Q N+R+E+++
Sbjct: 160 KGYLVSK-GIEANRVYTEGKGKRQLKVDPKSCKGARKAQIACQQPNRRVEVEVV 212
>gi|325202801|gb|ADY98255.1| ompA family protein [Neisseria meningitidis M01-240149]
Length = 242
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 68/186 (36%), Gaps = 27/186 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-----SSLDKAED-- 52
M K+L L ++F+ SG +A + + +IV +G + DKA
Sbjct: 1 MTKQLKLSALFVALLASGTAVAGEVSVQGYTVSGQSNEIVRNNYGECWKNAYFDKASQGR 60
Query: 53 -----------------EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ + + I+ F + L +
Sbjct: 61 VECGDAVAAPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAKTLFGF-DKDSLRAEAQDN 119
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L+++A L + + ++ HTD +G+ K N +S+ RA V+ + L+ GV +R IS
Sbjct: 120 LKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLVSNGVPVSR-ISAV 178
Query: 156 GFAYKY 161
G
Sbjct: 179 GLGESQ 184
>gi|296534564|ref|ZP_06896978.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957]
gi|296265104|gb|EFH11315.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957]
Length = 97
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L + ++ A + +T I + H D G+ + N +SQ RAD + + L+ R
Sbjct: 1 ADLTDRARQIISEAAQNSGRVQTTRIEVAGHADRAGSPQYNQRLSQRRADAVAAELV-RL 59
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ISV+ F P+ V N+R+EI +
Sbjct: 60 GVARSAISVQAFGESRPLVPTADGVREPQNRRVEIVL 96
>gi|332560366|ref|ZP_08414688.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
gi|332278078|gb|EGJ23393.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
Length = 701
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 6/114 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPML----QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ ++ L Q IA ++ + P V I+ HTD++G +NL +
Sbjct: 581 IDVDQITFDTGSAAIDPDEAEKLASLGQTIADMIAERPEEVFLIEGHTDAVGDAASNLAL 640
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S RA+ + L + + V+G+ + +D R N+R+ +++
Sbjct: 641 SDRRAESVALALTEYFDVPPENMVVQGYGEEDLRVDSDGPEQR--NRRVAVRLI 692
>gi|269138621|ref|YP_003295321.1| outer membrane protein A [Edwardsiella tarda EIB202]
gi|267984281|gb|ACY84110.1| outer membrane protein A [Edwardsiella tarda EIB202]
gi|304558635|gb|ADM41299.1| Outer membrane protein A precursor [Edwardsiella tarda FL6-60]
Length = 351
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ + NL +S++RA
Sbjct: 224 SDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRIGSDQYNLKLSKQRA 283
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + I+ RG P+ T D R ++R+ I++
Sbjct: 284 QTVVDYLVSK-GIPADKIAARGMGKADPVTGSTCDNVKPRAALINCLAPDRRVVIEV 339
>gi|257094585|ref|YP_003168226.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047109|gb|ACV36297.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 184
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 59/187 (31%), Gaps = 14/187 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + + ++ C L +I + L +
Sbjct: 1 MKYVAI-----LGLACCTLVPVVSFAQAERVLKPEEINERALVDLLSPEATVAPAARKTR 55
Query: 62 GIVVSRIGDMITCYIPV-----HVSFVSEVFLEKKFLPMLQLIATILNKFP--STVIAIQ 114
I V+R + P + + L K L ++ LN + AI+
Sbjct: 56 AISVTRDESSLPAAKPAAASLLIIFETNSASLTPKGKQSLDVVGRALNSEKLTAYKFAIE 115
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
H+D G NL +SQ RA+ + YL Q + G ++ +
Sbjct: 116 GHSDPRGGEDYNLRLSQARAESVVGYLEQSHQIEPARLKPVGKGPTQLLNPARPEA--PE 173
Query: 175 NQRIEIQ 181
N+R+ I+
Sbjct: 174 NRRVTIK 180
>gi|253720368|gb|ACT33424.1| outer membrane protein A precursor [Edwardsiella tarda]
Length = 351
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ + NL +S++RA
Sbjct: 224 SDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRIGSDQYNLKLSKQRA 283
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + I+ RG P+ T D R ++R+ I++
Sbjct: 284 QTVVDYLVSK-GIPADKIAARGMGKADPVTGSTCDNVKPRAALINCLAPDRRVVIEV 339
>gi|239758178|gb|ACN65406.2| outer membrane protein A precursor [Edwardsiella tarda]
Length = 351
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ + NL +S++RA
Sbjct: 224 SDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRIGSDQYNLKLSKQRA 283
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + I+ RG P+ T D R ++R+ I++
Sbjct: 284 QTVVDYLVSK-GIPADKIAARGMGKADPVTGSTCDNVKPRAALINCLAPDRRVVIEV 339
>gi|145688456|gb|ABP88969.1| outer membrane protein A [Edwardsiella tarda]
Length = 351
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ + NL +S++RA
Sbjct: 224 SDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRIGSDQYNLKLSKQRA 283
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ YL+ + I+ RG P+ T D R ++R+ I++
Sbjct: 284 QTVVDYLVSK-GIPADKIAARGMGKADPVTGSTCDNVKPRAALINCLAPDRRVVIEV 339
>gi|146278796|ref|YP_001168955.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145557037|gb|ABP71650.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 499
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
LE + L + ++ +F + + +D G+ + NL +S++RA +
Sbjct: 388 FEEGGNKLEAQSREALTDLVKLVEVGRFRDQQLMLVGFSDGRGSAEANLSLSRDRAATVA 447
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
L + + V GF P+ + T GR+ N+R+E+ + P
Sbjct: 448 RALQEAAPDLAPPL-VEGFGEALPLACDTTVAGRRMNRRVELWLRP 492
>gi|315654589|ref|ZP_07907495.1| OmpA/MotB domain protein [Mobiluncus curtisii ATCC 51333]
gi|315491053|gb|EFU80672.1| OmpA/MotB domain protein [Mobiluncus curtisii ATCC 51333]
Length = 308
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 16/189 (8%), Positives = 52/189 (27%), Gaps = 14/189 (7%)
Query: 12 MTTISGCGLASR--------EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ ++G A + + + S + E++ + ++ +
Sbjct: 73 LGILAGSTSAVQLGTLMGNLNQNPESQPERIQAMREASHLNSIKKQVEEQLKDAGKEGSL 132
Query: 64 VVSRIGDMITCYI--PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + + ++ +L+ I+ L IAI+ + D
Sbjct: 133 AMRITDKGLVLGMVANDTYFKTGDATIQPTAREVLKAISPTLMSIEEG-IAIEGYADPQP 191
Query: 122 TLKNNLLISQERADVIKSYLI---QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ A ++ + + + + + + N+R+
Sbjct: 192 IASAKFPSNYHLASARAIEVLIALKDDGVPGTKLRSISYGADHQTEATPGQDAWAFNRRV 251
Query: 179 EIQIFPRGN 187
+I I
Sbjct: 252 DIVIMSTAK 260
>gi|45758067|gb|AAO85792.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
Length = 367
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L ++ + I + +TD IG +NL +SQ RA
Sbjct: 244 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANPAIQVNGYTDRIGKEASNLKLSQRRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + ++ ++ G+ P+ T D GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GTNPANVTAVGYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 359
>gi|221638345|ref|YP_002524607.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
gi|221159126|gb|ACM00106.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
Length = 696
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 6/114 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPML----QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ ++ L Q IA ++ + P V I+ HTD++G +NL +
Sbjct: 576 IDVDQITFDTGSAAIDPDEAEKLASLGQTIADMIAERPEEVFLIEGHTDAVGDAASNLAL 635
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S RA+ + L + + V+G+ + +D R N+R+ +++
Sbjct: 636 SDRRAESVALALTEYFDVPPENMVVQGYGEEDLRVDSDGPEQR--NRRVAVRLI 687
>gi|126441843|ref|YP_001058607.1| OmpA family outer membrane protein [Burkholderia pseudomallei 668]
gi|126221336|gb|ABN84842.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 668]
Length = 236
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 9/120 (7%)
Query: 70 DMITCYIPVHVSFV--SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ I +F + ++ L +A L + ++I +TD +G+ N
Sbjct: 111 EPIRLNADAMFAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRLGSDAYNR 170
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEIQ 181
+SQ RA + YLI + G P+ D + N+R+E+
Sbjct: 171 QLSQARAKTVGDYLIAA-GVPADSVHAEGRGASDPLVQCDQRERAALIACLAPNRRVEVV 229
>gi|157963679|ref|YP_001503713.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157848679|gb|ABV89178.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 404
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 5/112 (4%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ + ++ +Q +A + ++ I + HT ++G+ N +S
Sbjct: 287 RVVEMKLTVLYENDSDKIDLSNTDKIQKLADFIEQYDIKQITVFGHTSAVGSQAYNQKLS 346
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ RA + L + I G PI N+RIE+ +
Sbjct: 347 ERRAASVAEMLAADFNIATGIIKAVGKGESEPIS--HIPE---QNRRIEVYL 393
>gi|269958634|ref|YP_003328421.1| putative outer membrane protein OmpA [Anaplasma centrale str.
Israel]
gi|269848463|gb|ACZ49107.1| putative outer membrane protein OmpA [Anaplasma centrale str.
Israel]
Length = 212
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ ++ +L + + + + I HTDS GT + NL + + RA
Sbjct: 40 RVEKVYFDFNKYEIKGSGKKVLLGLVERMKADKMSTLLIVGHTDSRGTEEYNLALGERRA 99
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYP---IDTND---TKVGRQNNQRIEIQ 181
+ +K +++ S + IS + P + ++D + N+R+ +
Sbjct: 100 NAVKEFILGCDRSLSPRISTQSRGKAEPEILVYSSDFKEAEKAHAQNRRVVLI 152
>gi|304411391|ref|ZP_07393005.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307305287|ref|ZP_07585035.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|304350246|gb|EFM14650.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306911590|gb|EFN42015.1| OmpA/MotB domain protein [Shewanella baltica BA175]
Length = 276
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 69/184 (37%), Gaps = 6/184 (3%)
Query: 6 GLSMFIMTTISGCGLASRE-----KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ T+ G ++ + ++++ L +S +++ K+ + +E Q D
Sbjct: 83 AIIGAFTGTLIGKSVSDTDTLHVQQRQINLQESQLSELSVKQQNAEKRASEYAKAQQELD 142
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ R +E FLP L +A ++N P + ++ + D
Sbjct: 143 ELLSAQRQLLSELALGLNVQFRTGSSEVESHFLPQLDDVAEVMNLSPELNLELKGYADRR 202
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + N +S++R + + + + ++ + F P+ + ++R+ +
Sbjct: 203 GDVSYNQALSEQRLLEV-RGYLIKQGVAAERMTTQAFGALSPLQAEQDRESDVFDRRVTL 261
Query: 181 QIFP 184
+ P
Sbjct: 262 TLQP 265
>gi|262193343|ref|YP_003264552.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262076690|gb|ACY12659.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 254
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 7/115 (6%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNN 126
+ C +P E + +L A + + P + + ++ HTD GT + N
Sbjct: 144 EAPDVECALPTVYFDFDEAGIRDDAREVLTQAAECIRQAPADSGVYVEGHTDGSGTEEYN 203
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +S+ RA + ++R SV P + G ++R+E Q
Sbjct: 204 VALSERRARTVTE-FLERLGIDPGRFSVIAKGEGVP-----SGEGTDKDRRVEFQ 252
>gi|325578440|ref|ZP_08148575.1| lipoprotein PlpD [Haemophilus parainfluenzae ATCC 33392]
gi|325160176|gb|EGC72305.1| lipoprotein PlpD [Haemophilus parainfluenzae ATCC 33392]
Length = 285
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G+ + + L + ++ +A L + + + + +TD +G+ NL
Sbjct: 139 NGNSSFALSGDFLFDFDKDTLTARGKEVVDSVAAQLKETGAKDVKVAGYTDRLGSDAYNL 198
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--------KVGRQNNQRIE 179
+SQ RA+ +K+ L+Q GV+S I+ G+ + D K + N+R+E
Sbjct: 199 DLSQRRANRVKARLLQDGVTSE--ITAIGYGKNPQVKACDGYKHGSKAEKDCLRPNRRVE 256
Query: 180 I 180
I
Sbjct: 257 I 257
>gi|251733463|emb|CAR82481.1| pal [Agrobacterium rhizogenes]
Length = 87
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L ++P+ I ++ H D GT + NL + RA K YL
Sbjct: 2 DSTSIRSDASQTLDRQAQWLARYPNYAITVEGHADERGTREYNLALGARRAAATKDYLAS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RGV + R ++ + + P+ T D
Sbjct: 62 RGVPAQRMKTIS-YGKERPVATCDD 85
>gi|254361457|ref|ZP_04977597.1| outer membrane protein OmpA [Mannheimia haemolytica PHL213]
gi|153092967|gb|EDN73993.1| outer membrane protein OmpA [Mannheimia haemolytica PHL213]
Length = 230
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L ++ + I + +TD IG +NL +SQ RA
Sbjct: 107 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRIGKEASNLKLSQRRA 166
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + ++ ++ G+ P+ T D GR ++R+EIQ+
Sbjct: 167 ETVANYIVSK-GTNPANVTAVGYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 222
>gi|53719675|ref|YP_108661.1| OmpA family protein [Burkholderia pseudomallei K96243]
gi|76810742|ref|YP_333152.1| OmpA family protein [Burkholderia pseudomallei 1710b]
gi|126453035|ref|YP_001065862.1| OmpA family outer membrane protein [Burkholderia pseudomallei
1106a]
gi|134282791|ref|ZP_01769494.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 305]
gi|167720016|ref|ZP_02403252.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
DM98]
gi|167739026|ref|ZP_02411800.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 14]
gi|167816239|ref|ZP_02447919.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 91]
gi|167824618|ref|ZP_02456089.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 9]
gi|167846148|ref|ZP_02471656.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
B7210]
gi|167894724|ref|ZP_02482126.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
7894]
gi|167903126|ref|ZP_02490331.1| outer membrane protein, OmpA family [Burkholderia pseudomallei NCTC
13177]
gi|167911363|ref|ZP_02498454.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 112]
gi|167919383|ref|ZP_02506474.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
BCC215]
gi|217423544|ref|ZP_03455045.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 576]
gi|226196265|ref|ZP_03791848.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
Pakistan 9]
gi|237811866|ref|YP_002896317.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
MSHR346]
gi|242314198|ref|ZP_04813214.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1106b]
gi|254180141|ref|ZP_04886740.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1655]
gi|254188449|ref|ZP_04894960.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
Pasteur 52237]
gi|254198064|ref|ZP_04904486.1| outer membrane protein, OmpA family [Burkholderia pseudomallei S13]
gi|254259492|ref|ZP_04950546.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1710a]
gi|254297974|ref|ZP_04965427.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
406e]
gi|52210089|emb|CAH36063.1| OmpA family protein [Burkholderia pseudomallei K96243]
gi|76580195|gb|ABA49670.1| OmpA family protein [Burkholderia pseudomallei 1710b]
gi|126226677|gb|ABN90217.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1106a]
gi|134245877|gb|EBA45968.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 305]
gi|157808001|gb|EDO85171.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
406e]
gi|157936128|gb|EDO91798.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
Pasteur 52237]
gi|169654805|gb|EDS87498.1| outer membrane protein, OmpA family [Burkholderia pseudomallei S13]
gi|184210681|gb|EDU07724.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1655]
gi|217393402|gb|EEC33423.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 576]
gi|225931663|gb|EEH27667.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
Pakistan 9]
gi|237506719|gb|ACQ99037.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
MSHR346]
gi|242137437|gb|EES23839.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1106b]
gi|254218181|gb|EET07565.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1710a]
Length = 236
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 9/120 (7%)
Query: 70 DMITCYIPVHVSFV--SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ I +F + ++ L +A L + ++I +TD +G+ N
Sbjct: 111 EPIRLNADAMFAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRLGSDAYNR 170
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEIQ 181
+SQ RA + YLI + G P+ D + N+R+E+
Sbjct: 171 QLSQARAKTVGDYLIAA-GVPADSVHAEGRGASDPLVQCDQRERAALIACLAPNRRVEVV 229
>gi|325134964|gb|EGC57596.1| ompA family protein [Neisseria meningitidis M13399]
gi|325136954|gb|EGC59551.1| ompA family protein [Neisseria meningitidis M0579]
gi|325145176|gb|EGC67458.1| ompA family protein [Neisseria meningitidis M01-240013]
Length = 242
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 27/186 (14%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-----SSLDKAED-- 52
M K+L L ++F+ SG +A + + +IV +G + DKA
Sbjct: 1 MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNYGECWKNAYFDKASQGR 60
Query: 53 -----------------EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ + + I+ F + L +
Sbjct: 61 VECGDAVAAPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAKTLFGF-DKDSLRAEAQDN 119
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L+++A L++ + ++ HTD +G+ K N +S+ RA V+ + L+ GV +R IS
Sbjct: 120 LKVLAQRLSRTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLVSNGVPVSR-ISAV 178
Query: 156 GFAYKY 161
G
Sbjct: 179 GLGESQ 184
>gi|260879443|ref|ZP_05891798.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus
AN-5034]
gi|308093505|gb|EFO43200.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus
AN-5034]
Length = 292
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 5/98 (5%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA--DVIKSYLIQR 144
L K +L + L + I+ ++ + L
Sbjct: 193 QLTKASKSVLLRL---LIMCVTIKISTSCWWRHTLIQPMVRAKARAYRSDEQSLYVLTLN 249
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I V+G+ + PI N T +G+ N+R+ I +
Sbjct: 250 HWVCRDRIQVQGYGKRRPIADNGTPIGKDKNRRVVISL 287
>gi|188579997|ref|YP_001923442.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
gi|179343495|gb|ACB78907.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
Length = 282
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/217 (13%), Positives = 64/217 (29%), Gaps = 35/217 (16%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ------ 59
L+M + ++ + + + + + + AE +
Sbjct: 30 MLAMGAVLALAPARANPLTEVPGTRPPAAEGEAGTEAPPPRDEVAERVEAGAVNPSANAI 89
Query: 60 ---------------DTGIVVSRIGDMITCYIP-------VHVSFVSEVFLEKKFLPMLQ 97
+ VS + + L + L+
Sbjct: 90 IRSLAPFADGNPGRPAAPVAVSPGDGGPSLRVDPARSVDLTVFFAYDSARLTPEARIQLE 149
Query: 98 LIATIL--NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ L + I HTD+ G L N +S RA ++++L + + +
Sbjct: 150 PLGQALQSRELAGHGFLIAGHTDAAGGLGYNRRLSLARARAVRAHLAETYGIDPHRLRIH 209
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIF---PRGNIK 189
G+ P D + N+R+E+ + PRG ++
Sbjct: 210 GWGPGRPKDPARPFA--RINRRVEVSLIAPAPRGALR 244
>gi|114705809|ref|ZP_01438712.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
gi|114538655|gb|EAU41776.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
Length = 407
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 66/180 (36%), Gaps = 13/180 (7%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--TGIVVSRIGD 70
TT++ E ++ + ++ D E E + + + VS
Sbjct: 229 TTVAAKAATGAETDLETEAETAEAAATSRTADLKSD-IEAELADMGEGVPSQVEVSEGEG 287
Query: 71 MITCYIPVHV----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT---L 123
+ + V + M++ IA +L I I+ HTD+
Sbjct: 288 GLMISLADDFDSGMFSVGSAKPNGAAVQMMEKIANVLKTRNG-RIIIRGHTDARPFTSEN 346
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+N +S RA + L + G+ + R S+ GFA + P D + + N+RIEI +
Sbjct: 347 YDNWRLSTARAHMAYYMLTRGGLGAERVESIEGFADRQPKDAENPEAD--INRRIEILLV 404
>gi|160874991|ref|YP_001554307.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|160860513|gb|ABX49047.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|315267223|gb|ADT94076.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 276
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 69/184 (37%), Gaps = 6/184 (3%)
Query: 6 GLSMFIMTTISGCGLASRE-----KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ T+ G ++ + ++++ L +S +++ K+ + +E Q D
Sbjct: 83 AIIGAFTGTLIGKSVSDTDTLHVQQRQINLQESQLSELSVKQQAAEKRASEYAKAQQELD 142
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ R +E FLP L +A ++N P + ++ + D
Sbjct: 143 ELLSAQRQLLSELALGLNVQFRTGSSEVESHFLPQLDDVAEVMNLSPELNLELKGYADRR 202
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + N +S++R + + + + ++ + F P+ + ++R+ +
Sbjct: 203 GDVSYNQALSEQRLLEV-RGYLIKQGVAAERMTTQAFGALSPLQAEQDRESDVFDRRVTL 261
Query: 181 QIFP 184
+ P
Sbjct: 262 TLQP 265
>gi|194336954|ref|YP_002018748.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
gi|194309431|gb|ACF44131.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 519
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L+ + + I +L+ K+ + + D+ G++K+N ++Q+RA+V+
Sbjct: 418 FRADSEVLDTRANRDIGRIVAVLSQPKYKDKRVVLIGFADAAGSIKHNKELAQKRAEVVA 477
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ LI+ GV V G + + NDT+ R+ N+RIE+ +
Sbjct: 478 TALIEEGVQCA---EVTGVGAEAFVAPNDTQENREKNRRIEVWV 518
>gi|228472824|ref|ZP_04057582.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624]
gi|228275875|gb|EEK14641.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624]
Length = 393
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 6/139 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIP----VHVSFVSEVFLEKKFLPMLQLIATIL 103
D+ E+ + GD I + +K L + +A L
Sbjct: 256 DELENYLNEKYGSNAQNKYATGDAARELIEKGYINVYFDFNSSKPQKSSLWAVDFVANYL 315
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + + D G+ N +S +RA+ + L+ + +S G +
Sbjct: 316 KQNSGASVNAVGYADEKGSENYNQKLSAKRAE-VIKQLLVDRGINASQLSFEGKGEDKTV 374
Query: 164 DTNDTKVGRQNNQRIEIQI 182
+ N + RQ +R+ ++
Sbjct: 375 NANSSNA-RQLARRVTFEL 392
>gi|58422901|gb|AAW73250.1| OmpA [Enterobacter cloacae]
Length = 223
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + TD IG+ N +S++RA
Sbjct: 116 SDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRIGSDAYNQKLSEKRA 175
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQN 174
+ YLI + IS RG P+ N D R
Sbjct: 176 QSVVDYLISK-GIPANKISPRGMGESNPVTGNTCDNVKARAA 216
>gi|328473818|gb|EGF44653.1| hypothetical protein VP10329_14185 [Vibrio parahaemolyticus 10329]
Length = 1592
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 60/156 (38%), Gaps = 13/156 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDT--GIVVSRIGDMITCYIPVHVSFVSEV--FLEKKFLPML 96
+ + +LD A++ ++ IV R G I + L +
Sbjct: 612 QEWAQALDDAKNLINGSNGESIAHIVEDRQGLAIHINFKFNEWQYGNEHGKLRTDIKQVC 671
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
Q +A ++ PS ++I+ H IG+ N +++ +RA + + +I + +
Sbjct: 672 QNLAQLMLDNPSYKLSIEGHAGRIGSSDANDIVAAKRAKTVTNAIISIDSNLEERVYTAS 731
Query: 157 FAYKYPIDTNDTKVGR---------QNNQRIEIQIF 183
+ P+ + TK ++R+E+++
Sbjct: 732 YGNTQPLTADGTKSDMSQTGDSAPAALDRRVEVRLI 767
>gi|119775139|ref|YP_927879.1| OmpA family protein [Shewanella amazonensis SB2B]
gi|119767639|gb|ABM00210.1| conserved hypothetical OmpA family protein [Shewanella amazonensis
SB2B]
Length = 240
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 67/184 (36%), Gaps = 6/184 (3%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV----NKRFGSSLDKAEDEFQMQLQDT 61
+ I G + E+ D ++ + A D + Q
Sbjct: 49 AIIGAFAGGIIGKSVGDEEEINDHKQALATQDAEIERLAQKSANYDALASDYAITRAQLN 108
Query: 62 GIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ +R + + ++V F +E F LQ +A ++ P VI ++ D
Sbjct: 109 TLQTAREAKLTELTLGLNVQFKTGSSDIEPHFQNQLQAVARVMEAQPDLVIDLKGFADRR 168
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G N +S++R +K+YL+ ++ + + F P+ + ++R+ +
Sbjct: 169 GDSDYNQALSEQRLANVKAYLVSA-GVASDRLQGKAFGATAPLSADAGFESDFFDRRVTL 227
Query: 181 QIFP 184
++ P
Sbjct: 228 ELVP 231
>gi|45758069|gb|AAO85793.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
gi|45758071|gb|AAO85794.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
Length = 367
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L ++ + I + +TD IG +NL +SQ RA
Sbjct: 244 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANPAIQVNGYTDRIGKEASNLKLSQRRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGR-------QNNQRIEIQI 182
+ + +Y++ + ++ ++ G+ P+ T D GR ++R+EIQ+
Sbjct: 304 ETVANYIVSK-GTNPANVTAVGYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 359
>gi|209519335|ref|ZP_03268134.1| OmpA/MotB domain protein [Burkholderia sp. H160]
gi|209500219|gb|EEA00276.1| OmpA/MotB domain protein [Burkholderia sp. H160]
Length = 215
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A+ + V+ HTD IG+ N +S RA +
Sbjct: 99 DALFDFDKAILKPAGKDRLSELASKIQGINLEVVVATGHTDRIGSDAYNDRLSLRRAQAV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQIF 183
K++L+ + I G + P+ T + R ++R+E+++
Sbjct: 159 KAFLVSK-GVEANRIYTEGKGRRNPVTTGCNQKNRKQLIACLAPDRRVEVEVV 210
>gi|167565227|ref|ZP_02358143.1| hypothetical protein BoklE_21929 [Burkholderia oklahomensis EO147]
Length = 459
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 17/158 (10%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL 103
+ + L + + + +F + + F+ ++ +
Sbjct: 227 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGAFDVGKAKVRPDFMHNIERLGLAF 286
Query: 104 NKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQR---------GVSSNR 150
+P + + HTDS +N +S+ RA + L + R
Sbjct: 287 APWPG-DLEVIGHTDSRPIRTSEFPDNQALSEARARTVADELRTTALPGGARAPENAVQR 345
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEI--QIFPRG 186
I G PIDT T + N+R+++ ++ P G
Sbjct: 346 NIEYSGRGDAQPIDTAKTAAAYERNRRVDVLWKVIPDG 383
>gi|46398705|gb|AAS92038.1| IcmN protein [Legionella pneumophila]
Length = 164
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 52/141 (36%), Gaps = 2/141 (1%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIA 100
+ D + L GI V+ +G I F + L +L IA
Sbjct: 19 SVDGACDATIIKMMTDLNKKGIKVASVGQNDLISIXASALFADQSPRLNWASYSLLNEIA 78
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L +F I + S++ ++K ++ R+ V+ YL + +R I +G
Sbjct: 79 AFLKQFRKIAITVTSYSSKYVSVKRERALTLARSRVVSEYLWSQ-GVDSRIIFTQGLGSD 137
Query: 161 YPIDTNDTKVGRQNNQRIEIQ 181
PI + R N R+EI
Sbjct: 138 KPITSYTLGGDRSPNARVEIT 158
>gi|13472828|ref|NP_104395.1| hypothetical protein mll3244 [Mesorhizobium loti MAFF303099]
gi|14023575|dbj|BAB50181.1| mll3244 [Mesorhizobium loti MAFF303099]
Length = 967
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 57/163 (34%), Gaps = 19/163 (11%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIV----------VSRIGDMITCYIPVHVSFVSEVF 87
+V + + +++A + D ++ + +V
Sbjct: 803 VVGEAPANWINRARAAAEQLSADGVVLDVSQLQELNLAELNDLREAIQATDIFFYSGKVV 862
Query: 88 LEKKFLPMLQLIATILNKFPS--------TVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ P+L +A + +F + H+D+ G N IS RA+ +
Sbjct: 863 PGPEQTPVLDRLADQIKEFAENARKSGVTARFMLTGHSDATGRETANASISAARAETV-R 921
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + + + VRG P+ +++ G N+R+ I +
Sbjct: 922 ALLNKRGVAPELLLVRGAGTFEPLVPENSQTGSSTNRRVSITV 964
>gi|224824631|ref|ZP_03697738.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
gi|224603124|gb|EEG09300.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
Length = 218
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 70/211 (33%), Gaps = 32/211 (15%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-----SLDKAEDEF- 54
M K+L LS + + ++ K + + +G DKA +
Sbjct: 1 MNKQLKLSALVAALLV--SASAFAAKPGYTADQATDAVTRNSYGECWKNTYFDKATEGLV 58
Query: 55 ----QMQLQDTGIVVSRIGDMITCYIPVHV-------SFVSEVFLEKKFLPMLQLIATIL 103
+ + V+ + V ++ L L + + L
Sbjct: 59 ECGDKEAAKPAPTPVAEAPKPAMVAVKEKVTLSAKVLFDFNKTNLRADAKNELDPLVSRL 118
Query: 104 NKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ + + HTD +G+ K N +SQ+RAD +K+Y + ++ G
Sbjct: 119 KGDANLKSVEVDGHTDYLGSEKYNQALSQKRADAVKNYFVAA-GVPAEKVTAVGKGESEA 177
Query: 163 IDTNDTK-----------VGRQNNQRIEIQI 182
T++ K + ++R+E+ I
Sbjct: 178 KLTDECKAKKFKKKAALQACLEGDRRVELTI 208
>gi|332702327|ref|ZP_08422415.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332552476|gb|EGJ49520.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 282
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 56/194 (28%), Gaps = 15/194 (7%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
L + + E + +I L+ + +D
Sbjct: 46 LVVLGSIVGTFGASPETENYLARHDERKTREIGPMNDIKDLELLKPLLYEDARDDIRFAE 105
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP--------------STVIA 112
I + + L ++ ++ +A +L + P
Sbjct: 106 NKLIQIMSISSDILFEPGQTKLSERGRDLVGRMAPVLRELPQPFLLAGHTSTLRDELKTE 165
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+ G IS RA + L+ GV R V FA P N+T R
Sbjct: 166 YLDYKPKDGEPNPGWRISLGRAMAMYRELLVHGVPVERM-RVEAFADYRPRFGNETAAER 224
Query: 173 QNNQRIEIQIFPRG 186
+ N+R++I + RG
Sbjct: 225 RMNRRVDIVLDKRG 238
>gi|222148525|ref|YP_002549482.1| OmpA family protein [Agrobacterium vitis S4]
gi|221735511|gb|ACM36474.1| OmpA family protein [Agrobacterium vitis S4]
Length = 880
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 48/126 (38%), Gaps = 7/126 (5%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT----ILNKFPSTVIAIQSHTDS 119
M + + L+ +A +L P I+ HTD+
Sbjct: 748 SARIRDKMRRIDLDTVTFATGSADISMNQAGTLKKVADAIVRVLKDDPGETFLIEGHTDA 807
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+G+ ++NL++S RA+ + + L Q + +G+ ++ Q N+R+
Sbjct: 808 VGSAESNLVLSDRRAESVANVLTQVYGIPPENMITQGYGEQFLKVMTYGPE--QQNRRVT 865
Query: 180 I-QIFP 184
+ ++ P
Sbjct: 866 VRRVTP 871
>gi|298346001|ref|YP_003718688.1| flagellar motor protein B [Mobiluncus curtisii ATCC 43063]
gi|304390241|ref|ZP_07372195.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315657506|ref|ZP_07910388.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298236062|gb|ADI67194.1| flagellar motor protein B [Mobiluncus curtisii ATCC 43063]
gi|304326723|gb|EFL93967.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315491978|gb|EFU81587.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 307
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 16/189 (8%), Positives = 52/189 (27%), Gaps = 14/189 (7%)
Query: 12 MTTISGCGLASR--------EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ ++G A + + + S + E++ + ++ +
Sbjct: 73 LGILAGSTSAVQLGTLMGNLNQNPESQPERIQAMREASHLNSIKKQVEEQLKDAGKEGSL 132
Query: 64 VVSRIGDMITCYI--PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + + ++ +L+ I+ L IAI+ + D
Sbjct: 133 AMRITDKGLVLGMVANDTYFKTGDATIQPTAREVLKAISPTLMSIEEG-IAIEGYADPQP 191
Query: 122 TLKNNLLISQERADVIKSYLI---QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ A ++ + + + + + + N+R+
Sbjct: 192 ISSAKFPSNYHLASARAIEVLIALKDDGVPGTKLRSISYGADHQTEATPGQDAWAFNRRV 251
Query: 179 EIQIFPRGN 187
+I I
Sbjct: 252 DIVIMSTAK 260
>gi|253990221|ref|YP_003041577.1| outer membrane protein A [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781671|emb|CAQ84834.1| outer membrane protein a (outer membrane protein ii*) [Photorhabdus
asymbiotica]
Length = 366
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 46/125 (36%), Gaps = 14/125 (11%)
Query: 70 DMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNN 126
+ + V F L+ + L + T L T + + +TD IG N
Sbjct: 230 ENKRFTLRSDVLFAFASSELKAEGKHTLDQLYTELAHIDPTQGKVLVLGYTDRIGKDVYN 289
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT---------KVGRQNNQR 177
+SQ+RA + YL+ + IS G P+ T T ++R
Sbjct: 290 QKLSQKRAQSVVDYLVTK-GIPAGSISAEGHGKANPV-TGSTCDKVLKPNLISCLAPDRR 347
Query: 178 IEIQI 182
+EI+I
Sbjct: 348 VEIEI 352
>gi|163733012|ref|ZP_02140456.1| OmpA domain protein [Roseobacter litoralis Och 149]
gi|161393547|gb|EDQ17872.1| OmpA domain protein [Roseobacter litoralis Och 149]
Length = 519
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGT 122
V R+G M L+ + + +A L + F + + +D G+
Sbjct: 397 VQRLGGMKRLT-TSFRFEAGSARLDAQSRSNVVQLAHDLEQGRFDARQMIFVGFSDGQGS 455
Query: 123 LKNNLLISQERADVIKSYLIQRG---VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ N+ I+ RA+ + + + + V F P+ +D+ GRQ N+R+E
Sbjct: 456 AEANMEIALSRANSVADAVRTKAETADLMQIDMQVDAFGEAMPLACDDSVWGRQANRRVE 515
Query: 180 IQI 182
+ +
Sbjct: 516 VWV 518
>gi|255035472|ref|YP_003086093.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254948228|gb|ACT92928.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 314
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
S L K L I L++ S I ++SHTD++G LK NL +++ERA I+ Y
Sbjct: 211 FEQSTTNLSKSSTKNLSKILNCLSENRSVKITLESHTDNVGDLKKNLRLAEERAARIRQY 270
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ +S +R I R P+ N+ + R N+RI +++
Sbjct: 271 LVDNKISESR-IQCRILGPLLPLAPNNNEYNRSLNRRIVVKV 311
>gi|170722232|ref|YP_001749920.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169760235|gb|ACA73551.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 435
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 6/167 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
A + K + + + + + Q R + V
Sbjct: 271 ANAKSQAKALAEFAQSPAGQAIVAEQGFVSQQIKSLAIPAQVDMPPRYRNLAQKAQRLSV 330
Query: 79 HV-SFVSEVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERAD 135
+ L+ K L + +A L + + D T L+S+ RA
Sbjct: 331 NFRFQEGSASLDNKALRDTKRVADYLRQAGKLQNKAVLVGFGDPKETPGRAALLSRLRAQ 390
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ L + GV + V G + P+ N+ + GR N+R+E+ +
Sbjct: 391 AVRRELARDGV---EVLEVTGMGDELPVAGNELEQGRLRNRRVEVWV 434
>gi|111220228|ref|YP_711022.1| hypothetical protein FRAAL0749 [Frankia alni ACN14a]
gi|111147760|emb|CAJ59419.1| Putative outer membrane protein [Frankia alni ACN14a]
Length = 186
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 57/166 (34%), Gaps = 18/166 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC +S F + T + L G +T
Sbjct: 38 GCSASS--DTASFTPAPHATRVAPAVEADPLPPLSKFITQP----------DGSQVTTVS 85
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + L + + LQ + + + P I++ ++D +G ++N +S ERA
Sbjct: 86 ADYLFDSNSSELRGEAMTALQQVLPAIREHPG-PISVIGYSDGLGRTEDNQKLSLERAKS 144
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++++L + + + V G R +R+EI +
Sbjct: 145 VEAWLATQ-NIPSSVLDVEGRGE-QGAQDGVADASR---RRVEIVL 185
>gi|90577360|ref|ZP_01233171.1| chemotaxis LafU protein [Vibrio angustum S14]
gi|90440446|gb|EAS65626.1| chemotaxis LafU protein [Vibrio angustum S14]
Length = 332
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 55/148 (37%), Gaps = 18/148 (12%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLPMLQLIATIL 103
E+ + I V + + L F +L IA I
Sbjct: 134 SVVEETAKQVSAQGNISVDVTPQGLRIILQDDFKQNMFHRGSANLTPFFEDVLLSIAPIF 193
Query: 104 NKFPSTVIAIQSHTDSIGTLKN-----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ +++I I HTD+ + N +S RA+V + LI G+ SNR + V A
Sbjct: 194 KQISNSLI-ISGHTDATPFKRQFSNRSNWELSSSRANVARQTLIAGGMPSNRVLQVAAMA 252
Query: 159 YKYPI---DTNDTKVGRQNNQRIEIQIF 183
+ + N ++ N+RIE+ I
Sbjct: 253 ERALLNKQSPNASE-----NRRIELFIL 275
>gi|328469233|gb|EGF40179.1| hypothetical protein VP10329_10131 [Vibrio parahaemolyticus 10329]
Length = 301
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 57/179 (31%), Gaps = 25/179 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K L + I ++GC N+ S ++ ++ L
Sbjct: 1 MKTTIRLLSGIMIGALLAGCAT------------ETYVSQENREKFSDVNVSKFLISECL 48
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I + H F + + + L + I I HTD
Sbjct: 49 APQ--------REIHIAVAEHFDF-DKFKIREADATSLDAFIRDIQGLSG-RITIVGHTD 98
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ + N +S RA + +YL Q+ + ++ F P+ + + R N+R
Sbjct: 99 YKGSNEYNDALSLRRAQSVAAYLKQQLDPTFYDWEIKHFGETQPLTLDTSDQARAENRR 157
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ + L L L I + HTD +G+L N +++ RA + Y
Sbjct: 191 FDFDQSELKAEDLTQLDDFIEQLQGLEG-SILVAGHTDQVGSLSYNEKLAERRAQTVAEY 249
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L + +S V+ F P+ T N+R I
Sbjct: 250 LKTKLDASRLVWEVKAFGELQPVINQTTSEANALNRRAFIV 290
>gi|167572326|ref|ZP_02365200.1| hypothetical protein BoklC_20981 [Burkholderia oklahomensis C6786]
Length = 470
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 17/158 (10%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL 103
+ + L + + + +F + + F+ ++ +
Sbjct: 242 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGAFDVGKAKVRPDFMHNIERLGLAF 301
Query: 104 NKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQR---------GVSSNR 150
+P + + HTDS +N +S+ RA + L + R
Sbjct: 302 APWPG-DLEVIGHTDSRPIRTSEFPDNQALSEARARTVADELRATALPGGARAPENAVQR 360
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEI--QIFPRG 186
I G PIDT T + N+R+++ ++ P G
Sbjct: 361 NIEYSGRGDAQPIDTAKTAAAYERNRRVDVLWKVIPDG 398
>gi|163801589|ref|ZP_02195487.1| hypothetical protein 1103602000597_AND4_09052 [Vibrio sp. AND4]
gi|159174506|gb|EDP59308.1| hypothetical protein AND4_09052 [Vibrio sp. AND4]
Length = 1582
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 24/157 (15%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-------LEKKFLPMLQLIA 100
KAE + ++ + G + + + L ++ + + +
Sbjct: 617 KKAETVQEALGKEGNAQIFADGQGVVVRMN---FKFNSAEFENEVQVLHIDYIEVCKKLC 673
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR-----FISVR 155
+L++ P +AI H IGT +NNL IS+ RADV+K ++ + R + +
Sbjct: 674 QLLSQNPDYQVAIIGHAGPIGTHENNLKISKMRADVVKEAILAKASGEERANLESRLWIE 733
Query: 156 GFAYKYPIDT-------ND--TKVGRQNNQRIEIQIF 183
ID ND N+R+E+++
Sbjct: 734 FKGKSQLIDDIDGYDDVNDRSDNADIAVNRRVEVRLI 770
>gi|73853300|ref|YP_308796.1| OmpA-family lipoprotein [Escherichia coli]
gi|73476884|gb|AAZ76499.1| OmpA-family lipoprotein [Escherichia coli]
Length = 267
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L K L+ IAT ++ + I+ TD +G+ + N ++S++RA+ +
Sbjct: 156 DVLFNFDSWRLTDKANDELERIATKFSQVDD--VRIEGFTDPLGSKEYNRILSEKRAESV 213
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT------KVGRQNNQRIEIQ 181
K + I RG + R I G P+ K + N+R+EI
Sbjct: 214 KEWFISRGFKAER-IQATGRGADAPVALCPGMVGDGLKECLRPNRRVEIT 262
>gi|15607090|ref|NP_214472.1| peptidoglycan associated lipoprotein [Aquifex aeolicus VF5]
gi|2984343|gb|AAC07863.1| peptidoglycan associated lipoprotein [Aquifex aeolicus VF5]
Length = 203
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/202 (12%), Positives = 64/202 (31%), Gaps = 24/202 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE--------- 51
M K L + ++GCG+ + + K + +++K +G + + E
Sbjct: 6 MKKILIAGIAGSIVLAGCGVKTEDPCKDS-KAAFSKYLIDKCYGDYMKQIEINKENIANL 64
Query: 52 -------DEFQMQLQDTGIVVSRIGDMITCYIPVHV---SFVSEVFLEKKFLPMLQLIAT 101
+ L+ + + + V ++ L L +
Sbjct: 65 DKRVSALESDVDSLRREHEEIRAEIEKLKITGKEQVRVYFDSNKFTLRDDAKATLDELID 124
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ + + + D GT N +S +RA + +YLI + + + + +
Sbjct: 125 AVRDKDIKKVIVVGYADPRGTRGYNFELSMKRAQNVAAYLI-KNGIPVEKVRIASYGEE- 182
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
N + +++ +
Sbjct: 183 --LANLIGERHPEQRAVDVIVL 202
>gi|257126466|ref|YP_003164580.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
gi|257050405|gb|ACV39589.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
Length = 149
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 96 LQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI-S 153
L+ I ILNKF + + +TDS GT K N +S RA + + G+ I
Sbjct: 52 LKEIVNILNKFGESGTVDFVGYTDSTGTKKYNQKLSLIRARNVARLFREFGLKDAISIGK 111
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ G + P+D NDT G+ +N+R+EI
Sbjct: 112 ISGKGEEDPVDLNDTDQGKYSNRRVEIL 139
>gi|149190743|ref|ZP_01869009.1| outer membrane protein [Vibrio shilonii AK1]
gi|148835399|gb|EDL52370.1| outer membrane protein [Vibrio shilonii AK1]
Length = 205
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 52/150 (34%), Gaps = 2/150 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L + + + GC + K + + + + +T
Sbjct: 1 MKRLFIMGLLPFVLLGCAESPNVKTNRHQIDDLRDQDQDGVINQRDRCLDTPKHVAVDNT 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G +I D + L ++ + +L ++P++ + + T S G
Sbjct: 61 GCADWQISDKPVVVSVD--FDFDKSKLRSDQTSKVKRLVDMLEQYPNSNVVLIGDTSSEG 118
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
T N +++ R I++ L + G+ S R
Sbjct: 119 TDTYNKALAKRRTGAIRNELERMGIESERI 148
>gi|330998926|ref|ZP_08322653.1| putative outer membrane protein A [Parasutterella excrementihominis
YIT 11859]
gi|329576140|gb|EGG57659.1| putative outer membrane protein A [Parasutterella excrementihominis
YIT 11859]
Length = 212
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 64/207 (30%), Gaps = 26/207 (12%)
Query: 1 MI----KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN-------KRFGSSLDK 49
M+ K L + SG A+ ++ + T + N + +L +
Sbjct: 1 MMNTKTKFGMLIASVALAASGAVCAADAPANPYVQAAGQTLMTNFGLCVRTGYWTPALAE 60
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
A+ Q ++ + F ++ L+ + + L + + ++
Sbjct: 61 AQGALGQNCQCDTDIIKCEAGAERVTLSADTLFAFNKAVLKPEGIAKLTKLTSRMSGLTL 120
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
V+ I + D IG N +SQ RAD + + I G P+
Sbjct: 121 DVVMINGYADRIGGAAYNQKLSQRRADAV-KTFLAEHGVPAARIHAEGKGQADPVVNCPN 179
Query: 169 K-------------VGRQNNQRIEIQI 182
Q N+R I++
Sbjct: 180 PSAKGEIKTFKQLIECLQPNRRAVIEV 206
>gi|258592566|emb|CBE68875.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
Length = 184
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 55/179 (30%), Gaps = 28/179 (15%)
Query: 6 GLSMFIMTTISGCGLASREKKK-------------------VFLHKSNDTDIV---NKRF 43
+++ + I + + +K + N + +
Sbjct: 6 MITLLLAFFIVLYASSRVDGRKYSDLVSSIRMAFGVPLPPRPIVQAGNGGETLLPFPDVV 65
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
G + + + +++ + + R + V F L +L +A
Sbjct: 66 GLLVQQLSSHVEEEIKTGSVEIERNDKGLILRFRDTVLFGLGSATLSDDAKKILDKVARP 125
Query: 103 LNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
L P I ++ HTD + +N +S RA + +L++ ++ RG
Sbjct: 126 LFNMP-YAIEVEGHTDLLPIRSSNFPSNWELSVTRATAVIRHLVEVHRFPPARLAARGM 183
>gi|167578636|ref|ZP_02371510.1| hypothetical protein BthaT_10878 [Burkholderia thailandensis TXDOH]
gi|167616778|ref|ZP_02385409.1| hypothetical protein BthaB_10778 [Burkholderia thailandensis Bt4]
gi|257140710|ref|ZP_05588972.1| hypothetical protein BthaA_16123 [Burkholderia thailandensis E264]
Length = 575
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 17/158 (10%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL 103
+ + L + + + +F + + F+ ++ +
Sbjct: 339 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGAFDVGKAKVRPDFMHNIERLGLAF 398
Query: 104 NKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQR---------GVSSNR 150
+P + + HTDS +N +S+ RA + L + R
Sbjct: 399 APWPG-DLEVIGHTDSRPIRTSEFPDNQALSEARARTVADELRATALPGGARAPENAVQR 457
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEI--QIFPRG 186
I G PIDT T + N+R+++ ++ P G
Sbjct: 458 NIEYSGRGDAQPIDTAKTAAAYERNRRVDVLWKVIPDG 495
>gi|258543922|ref|ZP_05704156.1| lipoprotein PlpD [Cardiobacterium hominis ATCC 15826]
gi|258520861|gb|EEV89720.1| lipoprotein PlpD [Cardiobacterium hominis ATCC 15826]
Length = 256
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 43/135 (31%), Gaps = 9/135 (6%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSH 116
L + V + L + L + + T + +
Sbjct: 120 LPEDCATVYGEPAAPYRLAADALFAFDTATLRPEADRALADLLAKVRAHGDTGEVRVDGF 179
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK------- 169
TD +G+ N +SQ RAD +K+ + RG + I G P+
Sbjct: 180 TDRLGSATYNRELSQARADAVKN-YLVRGGIAASRIRAAGLGSSQPLAHCADSLPRGELI 238
Query: 170 VGRQNNQRIEIQIFP 184
Q ++R+E+ +
Sbjct: 239 ACLQPDRRVEVTVSS 253
>gi|134292850|ref|YP_001116586.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
gi|134136007|gb|ABO57121.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
Length = 226
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 58/172 (33%), Gaps = 9/172 (5%)
Query: 5 LGLSMFIMTTISGCGLASREK---KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ +F+ + + + + H + +
Sbjct: 40 TLMVLFLALYVLQLAKYNALDARYQTLARHDAAARGTAAVTLPERVPAWLASLDALKTAG 99
Query: 62 GIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + R I I V F + L P+L IA L++ S I ++ HTD++
Sbjct: 100 RIALVRAPHGIEIGIDAKVLFNVGDARLLPDAAPVLTQIARALSEHASGDILVEGHTDNV 159
Query: 121 GT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++N +S RA + YL +R + ++ G A P+ T D
Sbjct: 160 PIANAKYESNWELSSARAGSVVRYLAER-GVAPHRLAAIGRADTQPLVTGDD 210
>gi|158422404|ref|YP_001523696.1| OmpA family protein [Azorhizobium caulinodans ORS 571]
gi|158329293|dbj|BAF86778.1| OmpA family protein [Azorhizobium caulinodans ORS 571]
Length = 199
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 64/190 (33%), Gaps = 13/190 (6%)
Query: 2 IKELGL--SMFIMTTISGCG--LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+K L L ++ +S A + + + + + ++ +
Sbjct: 1 MKSLMLRGALTAALLVSAAAPLAAQTDLSNAQIVQGLNNLTQDAPVVTAASLRQAALDHA 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHV-----SFVSEVFLEKKFLPMLQLIATILNK--FPSTV 110
+G R I + ++ + + IA L+
Sbjct: 61 TMYSGPPSQRPPLAIQLDKLAQINVQIQFKLNSAIILPDSYATIGAIADALHNPVLQGYR 120
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ +TD+ GT ++NL +SQERAD + L + + G + DT + +
Sbjct: 121 FIVTGNTDTTGTREHNLKLSQERADAVVEALTTTFNVNPARLEAVGLGEEALQDTKNPES 180
Query: 171 GRQNNQRIEI 180
N+R++I
Sbjct: 181 --PVNRRVQI 188
>gi|940548|emb|CAA81039.1| Outer membrane or porin protein [Leptothrix discophora]
Length = 84
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
VI HTDS G+ N +S RA+ +K YL+ + + K P+ N TK
Sbjct: 5 VIIAVGHTDSDGSDALNDKLSVSRAEAVKKYLVSK-GIEQNRVYTEAKGEKQPVADNSTK 63
Query: 170 VGRQNNQRIEI 180
G+Q N+R+EI
Sbjct: 64 EGKQKNRRVEI 74
>gi|296115020|ref|ZP_06833663.1| outer membrane protein OmpA [Gluconacetobacter hansenii ATCC 23769]
gi|295978438|gb|EFG85173.1| outer membrane protein OmpA [Gluconacetobacter hansenii ATCC 23769]
Length = 392
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS------IGTLKNNLLISQE 132
L + ++ A +T I + +TD+ + N+ +S
Sbjct: 283 VFFDWDGAALTGRAREIVAEAAQASTHVQTTRIEVNGYTDNSAAQPGPRGQQYNMGLSLR 342
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ +K+ LI R I ++G+ +P+ N+R+EI +
Sbjct: 343 RANSVKAELI-RDGVPANAIDIQGYGEAHPLVPTGPDTREPQNRRVEIIL 391
>gi|237807905|ref|YP_002892345.1| OmpA domain-containing protein transmembrane region-containing
protein [Tolumonas auensis DSM 9187]
gi|237500166|gb|ACQ92759.1| OmpA domain protein transmembrane region-containing protein
[Tolumonas auensis DSM 9187]
Length = 341
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 14/124 (11%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + + I + +TD IG+ NL +SQ+RA
Sbjct: 217 SDVLFDFNKSTLKPAGVTALSQLYNQIQTLEMDDKNIVVYGYTDRIGSDGYNLKLSQDRA 276
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN---------NQRIEIQIFPR 185
+ +L + S I+ G P+ + ++R+ I++ +
Sbjct: 277 KTVSDFLTTK-GLSATRITAVGRGEADPVSPASCNAIKAKKDLIVCLAPDRRVNIEV--K 333
Query: 186 GNIK 189
G K
Sbjct: 334 GTKK 337
>gi|153876506|ref|ZP_02003792.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152067030|gb|EDN66208.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 240
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 73/213 (34%), Gaps = 26/213 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL---DKAEDEFQMQ 57
M+ L + + + R K ++ K+ +IV S L + EF
Sbjct: 16 MMSGLMMVFLFIAVVF-MLDVQRSKNQIEHQKNAMAEIVEVAEHSRLRLHQELLQEFISD 74
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL-----IATILNKFPSTV-I 111
L+ + + + P + + L+ +F +L +A +L+ I
Sbjct: 75 LKRWNADI-LEDNTVRFNSPQVLFHQGKSMLQPQFKNILDSFFPRYLAILLHYQEDIEAI 133
Query: 112 AIQSHTDSIGTLKNNL--------LISQERADVIKSYLI-------QRGVSSNRFISVRG 156
I+ HT S +++ +SQ+RA Y + + G
Sbjct: 134 RIEGHTSSDWLNADDIATRYLNNVELSQQRALATLEYCYLLASLDENLRKWLPQVLRANG 193
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
++ PI D + ++R+E ++ + K
Sbjct: 194 LSFAKPIFNADGSENAEQSRRVEFKVVTKAEEK 226
>gi|28901295|ref|NP_800950.1| hypothetical protein VPA1440 [Vibrio parahaemolyticus RIMD 2210633]
gi|153835951|ref|ZP_01988618.1| OmpA family protein [Vibrio parahaemolyticus AQ3810]
gi|260362852|ref|ZP_05775721.1| OmpA family protein [Vibrio parahaemolyticus K5030]
gi|260880140|ref|ZP_05892495.1| OmpA family protein [Vibrio parahaemolyticus AN-5034]
gi|260895257|ref|ZP_05903753.1| OmpA family protein [Vibrio parahaemolyticus Peru-466]
gi|260900609|ref|ZP_05909004.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
gi|28809808|dbj|BAC62783.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149750705|gb|EDM61450.1| OmpA family protein [Vibrio parahaemolyticus AQ3810]
gi|308085641|gb|EFO35336.1| OmpA family protein [Vibrio parahaemolyticus Peru-466]
gi|308091737|gb|EFO41432.1| OmpA family protein [Vibrio parahaemolyticus AN-5034]
gi|308107011|gb|EFO44551.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
gi|308112285|gb|EFO49825.1| OmpA family protein [Vibrio parahaemolyticus K5030]
Length = 301
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 57/179 (31%), Gaps = 25/179 (13%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K L + + ++GC N+ S ++ ++ L
Sbjct: 1 MKTTIRLLSGIMLGALLTGCAT------------ETYVSQENREKFSDVNVSKFLISECL 48
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
I + H F + + + L + I I HTD
Sbjct: 49 APQ--------REIHIAVAEHFDF-DKFNIREADATSLDAFIRDIQGLSG-RITIVGHTD 98
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
G+ + N +S RA + +YL Q+ + ++ F P+ + + R N+R
Sbjct: 99 YKGSNEYNDALSLRRAQSVAAYLKQQLDPTFYDWEIKHFGETQPLKLDTSDQARAENRR 157
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ + L L L I + HTD +G L N +++ RA + Y
Sbjct: 191 FDFDQSELKAEDLTQLDDFIEQLQGLEG-SILVAGHTDQVGLLSYNEKLAERRAQTVVEY 249
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L + +S V+ F P+ T N+R I
Sbjct: 250 LKTKLDASRLVWEVKAFGELQPVINQTTSEANALNRRAFIV 290
>gi|148261844|ref|YP_001235971.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|146403525|gb|ABQ32052.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
Length = 203
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 62/200 (31%), Gaps = 21/200 (10%)
Query: 2 IKELGLSMFIMTTI----SGCGLASREKKKVFLHKSNDTDIVNKRF-------------- 43
++ G+S + + + +S + + T V+
Sbjct: 1 MRFTGVSAAAVVALLGMGAAHAQSSGPSAQQIIQALKPTGNVSSTTRGIVPLAQGAAQAA 60
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ +M+ V ++ + + L + + L + L
Sbjct: 61 PAPSVAKPAAMRMKTTAPAAVSHAAAQTLSINLNID-FATGSAKLTPQAVTELDRLGRAL 119
Query: 104 --NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ + HTD+ G NL +SQ RA +K+YL+ + + G
Sbjct: 120 TDKTLAAYHFRVVGHTDTTGAASTNLALSQARAAAVKTYLMSKFDIPATRLQATGVGEAD 179
Query: 162 PIDTNDTKVGRQNNQRIEIQ 181
+ V + N+R++I
Sbjct: 180 LLVPTGPNVANRANRRVQII 199
>gi|251733459|emb|CAR82479.1| pal [Rhizobium undicola]
Length = 87
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L ++ I ++ H D GT + NL + RA K YL+
Sbjct: 2 DSTSIRADAQQTLDRQAQWLQRYSQYPITVEGHADERGTREYNLALGARRAAATKDYLVS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RG+ ++R ++ + + P+ T D
Sbjct: 62 RGIPASRIKTIS-YGKERPVATCDD 85
>gi|254500568|ref|ZP_05112719.1| OmpA family protein [Labrenzia alexandrii DFL-11]
gi|222436639|gb|EEE43318.1| OmpA family protein [Labrenzia alexandrii DFL-11]
Length = 193
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 60/192 (31%), Gaps = 16/192 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKS---NDTDIVNKRFGSSLDKAEDEFQMQL 58
+K L + + C + + L ++ N ++ S D + +
Sbjct: 1 MKNLFFASAAACAL--CFSTTLASAQTELSRNQIINSLQGAQEKVEVSADALQRAALENI 58
Query: 59 QD-------TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK--FPST 109
Q I + + + + + + + LIA L+
Sbjct: 59 QKYPGADSPQTIPMYQQLASLRQFNIEITFDFDSARIRPESYEAVGLIADALHTPYLQGQ 118
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I HTD+ G NL +SQ RA I+ L+ + G + D D
Sbjct: 119 TFFIVGHTDAKGDRTYNLELSQRRAQAIREALVTTFQVPGSTLFSVGLGEEQLRDPADPF 178
Query: 170 VGRQNNQRIEIQ 181
N+R+++
Sbjct: 179 A--AVNRRVQLI 188
>gi|325205456|gb|ADZ00909.1| ompA family protein [Neisseria meningitidis M04-240196]
Length = 244
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 69/188 (36%), Gaps = 29/188 (15%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-----SSLDKAED-- 52
M K+L L ++F+ SG +A + + +IV +G + DKA
Sbjct: 1 MTKQLKLSALFVALLASGTAVAGEVSVQGYTVSGQSNEIVRNNYGECWKNAYFDKASQGR 60
Query: 53 -------------------EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ + + I+ F + L +
Sbjct: 61 VECGDAVAAPEPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAKTLFGF-DKDSLRAEAQ 119
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L+++A L++ + ++ HTD +G+ K N +S+ RA V+ + L+ GV +R IS
Sbjct: 120 DNLKVLAQRLSRTNVQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLVSNGVPVSR-IS 178
Query: 154 VRGFAYKY 161
G
Sbjct: 179 AVGLGESQ 186
>gi|83593178|ref|YP_426930.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
gi|83576092|gb|ABC22643.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
Length = 360
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQ--------DTGIVVSRIGDMITCYIPVH----VSFV 83
KR +K E + +Q +++ + + + +
Sbjct: 155 AAAEEKRQQEEFNKTATELRQAIQAVPSLQALSNSLLIDNTPEGLRIQLIDREGLSMFPT 214
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKS 139
L +L L+A + P+ I+I HTD+ N +S +RA +
Sbjct: 215 GSSALLPHTRDLLALVAKAVADVPN-KISISGHTDAPPYSDPSGYGNWELSADRALASRR 273
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L+ G+ +R V G A P+ +D K +N+RI I +
Sbjct: 274 VLLANGLKEDRVDRVVGKAETEPLLADDPKA--PSNRRIAITLL 315
>gi|313672972|ref|YP_004051083.1| ompa/motb domain protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312939728|gb|ADR18920.1| OmpA/MotB domain protein [Calditerrivibrio nitroreducens DSM 19672]
Length = 201
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
L ++ + M + I + + + I HTDS+G + N L+ +RA+ +K+
Sbjct: 98 YFETGSDQLTEESINMTKEIINEIKNRENPELEIIGHTDSVGEKEANYLLGLKRAESVKN 157
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L +GV + I + P+ + N+R+E+ +
Sbjct: 158 ILTSQGVDTGMEIELSSLGEDNPLIPMPDETPEPKNRRVEVVV 200
>gi|126724638|ref|ZP_01740481.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150]
gi|126705802|gb|EBA04892.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150]
Length = 521
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSI 120
+ V R G ++ L+ + L+ +A I+ + H+D
Sbjct: 396 LDVVRGGKKLSVSF---HFKSGSTDLDVQSSGNLERLAQIIEIGGMDGKELIFVGHSDGE 452
Query: 121 GTLKNNLLISQERADVIKSYLIQ--RGVSSNRF-ISVRGFAYKYPIDTNDTKVGRQNNQR 177
G N IS R++ + + + + +R +S GF +PI +D++ G++ N+R
Sbjct: 453 GDAGINQSISNRRSNAVLRDIRRAAKSADLSRVKLSGVGFGEVFPIACDDSEWGKRINRR 512
Query: 178 IEIQI 182
+E+ I
Sbjct: 513 VEVWI 517
>gi|251733467|emb|CAR82483.1| pal [Agrobacterium vitis]
Length = 87
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L ++ I ++ H D GT + NL + RA K+YL+
Sbjct: 2 DSTSIRADAQQTLDRQAQWLQRYSQYPITVEGHADERGTREYNLALGARRAASTKAYLVS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RG+ +NR ++ + + P+ T D
Sbjct: 62 RGIPANRIKTIS-YGKERPVATCDD 85
>gi|150024135|ref|YP_001294961.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
JIP02/86]
gi|149770676|emb|CAL42140.1| Probable outer membrane protein, OmpA family [Flavobacterium
psychrophilum JIP02/86]
Length = 272
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 14/119 (11%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-------- 124
++ + L L+ IA +L K+ + IQ H +
Sbjct: 158 RIFLGDVLFQKGSSKLNVNAKNDLEKIAKMLLKYKNLQFEIQGHVCCTPPYQKEAIDRDT 217
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S RA V+ ++ + + +S NR I +G+ P+ Q ++R+E+ I
Sbjct: 218 RKRELSINRAKVVYNFFVAKKISKNRMIY-KGYGTGKPLGKEP-----QYDRRVELVIT 270
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 46/120 (38%), Gaps = 8/120 (6%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I + LE+K ++ + I + D G N +S RA
Sbjct: 24 IHSIYFDFDKFKLEEKQANETVNFIKNIDSTRIESVQIYGYCDDRGKESYNFKLSNNRAS 83
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTN---DTKVGRQNNQRIEIQI----FPRGNI 188
+I+ L++ G+ + +++ G ID + + R N+R+++ + P+ I
Sbjct: 84 IIQKKLVESGIKNKIIVTIEGKGRVM-IDDDIIENLPEVRSKNRRVDVVVNMKPLPKIKI 142
>gi|34497482|ref|NP_901697.1| flagellar motor protein MotB [Chromobacterium violaceum ATCC 12472]
gi|34103337|gb|AAQ59699.1| chemotaxis motB protein [Chromobacterium violaceum ATCC 12472]
Length = 306
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 72/178 (40%), Gaps = 15/178 (8%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
A +E+ + + + ++ ++D + F+ + ++ G I
Sbjct: 100 AGAKQEEVMQKQKEQARLNQLQQKIQQTID-QSELFKQYKNQLKLEMTPEGLKIQIVDEQ 158
Query: 79 H--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-----KNNLLISQ 131
+ + + +LQ +A LN+ P+ I+I HTD+ +N +S
Sbjct: 159 NRPMFDSGSSRMLPHTRVLLQQLAPELNQLPN-RISISGHTDAKPFGGGQGGYSNWELSA 217
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND--TKVGRQNNQRIEIQIFPRGN 187
+RA+ + L+ G++ N+ + V G A P+ +D + N+RI I + +
Sbjct: 218 DRANTARRELVAGGLTENKILRVVGLASANPLIKSDVFSPE----NRRITIVVLNKDT 271
>gi|288924935|ref|ZP_06418871.1| conserved hypothetical protein [Prevotella buccae D17]
gi|288338125|gb|EFC76475.1| conserved hypothetical protein [Prevotella buccae D17]
Length = 379
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKFLPMLQLIATIL 103
++ D+ + Q L + + + P + + ++ ++LIAT +
Sbjct: 241 AAKDRQIADLQNALDECNKKPKYVKPATATNLQPTVLFRQGKSVIDPAQYAPIELIATYM 300
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
K P+ + I+ + G+ + N +S RA+V+K LI++ + ++ +G
Sbjct: 301 KKNPTAKVEIKGYASPEGSAELNQKLSDARAEVVKKALIKKYKIAADRLTTKGMGATD 358
>gi|330993347|ref|ZP_08317282.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
gi|329759377|gb|EGG75886.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
Length = 407
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS------IGTLKNNLLISQE 132
L + ++ A +T I + +TD+ + NL +S
Sbjct: 298 VFFDWDGAALTGRAREIVAEAAQASTHVQTTRIEVNGYTDNSAAQPGPRGQQYNLGLSLR 357
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD +K+ LI R I V+G+ P+ N+R+EI +
Sbjct: 358 RADSVKAELI-RDGVPASAIGVQGYGEARPLVPTGPDTREPQNRRVEIIL 406
>gi|62317017|ref|YP_222870.1| lipoprotein [Brucella abortus bv. 1 str. 9-941]
gi|83269011|ref|YP_418302.1| outer membrane protein OprF [Brucella melitensis biovar Abortus
2308]
gi|189022284|ref|YP_001932025.1| outer membrane protein OprF [Brucella abortus S19]
gi|254691499|ref|ZP_05154753.1| outer membrane protein OprF [Brucella abortus bv. 6 str. 870]
gi|254698304|ref|ZP_05160132.1| outer membrane protein OprF [Brucella abortus bv. 2 str. 86/8/59]
gi|254731746|ref|ZP_05190324.1| outer membrane protein OprF [Brucella abortus bv. 4 str. 292]
gi|256256684|ref|ZP_05462220.1| outer membrane protein OprF [Brucella abortus bv. 9 str. C68]
gi|260544253|ref|ZP_05820074.1| outer membrane protein OprF [Brucella abortus NCTC 8038]
gi|260757119|ref|ZP_05869467.1| TraQ protein [Brucella abortus bv. 6 str. 870]
gi|260759511|ref|ZP_05871859.1| TraQ protein [Brucella abortus bv. 4 str. 292]
gi|260762755|ref|ZP_05875087.1| TraQ protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260882929|ref|ZP_05894543.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|297250039|ref|ZP_06933740.1| type IV secretion system outer membrane lipoprotein [Brucella
abortus bv. 5 str. B3196]
gi|123545549|sp|Q2YJ83|YP57_BRUA2 RecName: Full=Type IV secretion system putative outer membrane
lipoprotein BAB2_0057; Flags: Precursor
gi|148841383|sp|P0C536|YN58_BRUAB RecName: Full=Type IV secretion system putative outer membrane
lipoprotein BruAb2_0058; Flags: Precursor
gi|8163895|gb|AAF73905.1|AF226278_12 unknown [Brucella abortus]
gi|62197210|gb|AAX75509.1| lipoprotein, hypothetical [Brucella abortus bv. 1 str. 9-941]
gi|82939285|emb|CAJ12223.1| outer membrane protein OprF [Brucella melitensis biovar Abortus
2308]
gi|189020858|gb|ACD73579.1| outer membrane protein OprF [Brucella abortus S19]
gi|260097524|gb|EEW81398.1| outer membrane protein OprF [Brucella abortus NCTC 8038]
gi|260669829|gb|EEX56769.1| TraQ protein [Brucella abortus bv. 4 str. 292]
gi|260673176|gb|EEX59997.1| TraQ protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260677227|gb|EEX64048.1| TraQ protein [Brucella abortus bv. 6 str. 870]
gi|260872457|gb|EEX79526.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|297173908|gb|EFH33272.1| type IV secretion system outer membrane lipoprotein [Brucella
abortus bv. 5 str. B3196]
Length = 172
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 64/186 (34%), Gaps = 19/186 (10%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + +++ C + H+ + L E Q
Sbjct: 2 RTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQ-EELRLQVFPQEPTAQATMWPA 60
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + V V + + + L + + K I ++ TD+
Sbjct: 61 RPPKQTVNVYFPQDVTVFRPTSAQINQ-----LHTLLWPVPKH----INVRGLTDNNCPP 111
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFIS----VRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ +++ RA I ++LI +GV ++R V+ +A P+ GR N+R++
Sbjct: 112 PGDTQVARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPLSP-----GRVLNRRVD 166
Query: 180 IQIFPR 185
I+I +
Sbjct: 167 IEILRK 172
>gi|325955085|ref|YP_004238745.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323437703|gb|ADX68167.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 474
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 7/128 (5%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+T + +I ++T I + + L A ++ K P+ ++ HTD+
Sbjct: 345 ETVVSADQIAGLLTETIQGIEFDYDSDKIRQVSYSKLDNAAEVIMKHPNYNFWVEGHTDA 404
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI------DTNDTKVGRQ 173
G N +S+ RA + YL+ +GV+S + + G TN
Sbjct: 405 AGPDAYNQNLSERRAASVVRYLVNKGVNSAQLFPI-GKGESELKHPECNPTTNCPAWKNL 463
Query: 174 NNQRIEIQ 181
N+R+ +
Sbjct: 464 ENRRVVFK 471
>gi|303256827|ref|ZP_07342841.1| outer membrane protein A (Outer membrane protein II)
[Burkholderiales bacterium 1_1_47]
gi|302860318|gb|EFL83395.1| outer membrane protein A (Outer membrane protein II)
[Burkholderiales bacterium 1_1_47]
Length = 221
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 64/207 (30%), Gaps = 26/207 (12%)
Query: 1 MI----KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN-------KRFGSSLDK 49
M+ K L + SG A+ ++ + T + N + +L +
Sbjct: 10 MMNTKTKFGMLIASVALAASGAVCAADAPANPYVQAAGQTLMTNFGLCVRTGYWTPALAE 69
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
A+ Q ++ + F ++ L+ + + L + + ++
Sbjct: 70 AQGALGQNCQCDTDIIKCEAGAERVTLSADTLFAFNKAVLKPEGIAKLTELTSRMSGLTL 129
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
V+ I + D IG N +SQ RAD + + I G P+
Sbjct: 130 DVVMINGYADRIGGAAYNQKLSQRRADAV-KTFLAEHGVPAARIHAEGKGQADPVVNCPN 188
Query: 169 K-------------VGRQNNQRIEIQI 182
Q N+R I++
Sbjct: 189 PSAKGEIKTFKQLIECLQPNRRAVIEV 215
>gi|86748022|ref|YP_484518.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86571050|gb|ABD05607.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 212
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 56/152 (36%), Gaps = 11/152 (7%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ + ++ ++ +++ I I + + +K
Sbjct: 58 AAEPAERQFVDTLRNRPTRSLSSSEREQIAAMAKDKPNIDLEIT---FEYNSANISRKAE 114
Query: 94 PMLQLIATILNKFPSTV---IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
P ++ + L P + HTDSIG+ N +S+ RAD IK L+++ +
Sbjct: 115 PAVEALGKAL-ANPDLRGSTFVVAGHTDSIGSDNYNQDLSERRADTIKRVLVEKYGIAGA 173
Query: 151 FISVRGFAYKYPI-DTNDTKVGRQNNQRIEIQ 181
+ G+ P N T +N+R+++
Sbjct: 174 DLVTVGYGESKPKNADNPTD---ASNRRVQVV 202
>gi|212709470|ref|ZP_03317598.1| hypothetical protein PROVALCAL_00512 [Providencia alcalifaciens DSM
30120]
gi|212687808|gb|EEB47336.1| hypothetical protein PROVALCAL_00512 [Providencia alcalifaciens DSM
30120]
Length = 312
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 21/170 (12%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRIGDMITCYIPVH----VSF 82
+I++ +K ++ + + +++ I D + I +
Sbjct: 101 PNNIISGDANYRFEKLKENLEQAILQDPRLNELKPHLLIDMINDGLRIQIVDSANRPMFK 160
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIK 138
V +E +L+ IA +LN P+ I+I HTD + +N +S +RA+ +
Sbjct: 161 VGSATVEPYMRDILRAIAPLLNDVPN-RISISGHTDDLPYASEAYYSNWELSSDRANASR 219
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-NQRIEIQIFPRGN 187
LI G+ + + V G A + D + G N+RI I +
Sbjct: 220 RELIMGGMDERKVLRVVGMASSIHL---DKENGLAPVNRRISIIVLNEDE 266
>gi|167839008|ref|ZP_02465785.1| hypothetical protein Bpse38_20639 [Burkholderia thailandensis
MSMB43]
Length = 560
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 17/158 (10%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL 103
+ + L + + + +F + + F+ ++ +
Sbjct: 336 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGAFDVGKAKVRPDFMHNIERLGLAF 395
Query: 104 NKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQR---------GVSSNR 150
+P + + HTDS +N +S+ RA + L + R
Sbjct: 396 APWPG-DLEVIGHTDSRPIRTSEFPDNQALSEARARTVADELRTTALPGGARAPENAVQR 454
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEI--QIFPRG 186
I G PIDT T + N+R+++ ++ P G
Sbjct: 455 SIEYSGRGDAQPIDTAKTAAAYERNRRVDVLWKVIPDG 492
>gi|83717203|ref|YP_440080.1| hypothetical protein BTH_II1886 [Burkholderia thailandensis E264]
gi|83651028|gb|ABC35092.1| OmpA domain protein [Burkholderia thailandensis E264]
Length = 594
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 17/158 (10%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL 103
+ + L + + + +F + + F+ ++ +
Sbjct: 358 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGAFDVGKAKVRPDFMHNIERLGLAF 417
Query: 104 NKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQR---------GVSSNR 150
+P + + HTDS +N +S+ RA + L + R
Sbjct: 418 APWPG-DLEVIGHTDSRPIRTSEFPDNQALSEARARTVADELRATALPGGARAPENAVQR 476
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEI--QIFPRG 186
I G PIDT T + N+R+++ ++ P G
Sbjct: 477 NIEYSGRGDAQPIDTAKTAAAYERNRRVDVLWKVIPDG 514
>gi|315607966|ref|ZP_07882959.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
gi|315250435|gb|EFU30431.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
Length = 379
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKFLPMLQLIATIL 103
++ D+ + Q L + + + P + + ++ ++LIAT +
Sbjct: 241 AAKDRQIADLQNALDECNKKPKYVKPATATNLQPTVLFRQGKSVIDPAQYAPIELIATYM 300
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
K P+ + I+ + G+ + N +S RA+V+K LI++ + ++ +G
Sbjct: 301 KKNPTAKVEIKGYASPEGSAELNQKLSDARAEVVKKALIKKYKIAADRLTTKGMGATD 358
>gi|189179677|dbj|BAG39458.1| outer membrane protein [Gluconacetobacter intermedius]
Length = 364
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 7/110 (6%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH------TDSIGTLKNNLLISQE 132
L + ++ A +T I + + K NL +S
Sbjct: 255 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTSAHPGPRGEKYNLGLSMR 314
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD +K+ LI R I V G+ +P+ N+R+EI +
Sbjct: 315 RADSVKAELI-RDGVPANAIDVHGYGEAHPLVPTGPDTREPQNRRVEIIL 363
>gi|189179676|dbj|BAG39457.1| outer membrane protein [Gluconacetobacter intermedius]
Length = 373
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 7/110 (6%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH------TDSIGTLKNNLLISQE 132
L + ++ A +T I + + K NL +S
Sbjct: 264 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTSAHPGPRGEKYNLGLSMR 323
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD +K+ LI R I V G+ +P+ N+R+EI +
Sbjct: 324 RADSVKAELI-RDGVPANAIDVHGYGEAHPLVPTGPDTREPQNRRVEIIL 372
>gi|89900668|ref|YP_523139.1| OmpA/MotB [Rhodoferax ferrireducens T118]
gi|89345405|gb|ABD69608.1| OmpA/MotB [Rhodoferax ferrireducens T118]
Length = 387
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 10/116 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ L +A L VI + HTD IG+ N +S+ RA+ +
Sbjct: 269 DSLFDFDKASLKPTGQQDLDKLAAELKNTQFDVIKVTGHTDRIGSHAYNQKLSERRAEAV 328
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPI----------DTNDTKVGRQNNQRIEIQIF 183
K YL+ + I +G P+ + Q ++R+E+++
Sbjct: 329 KGYLMTSIGIAGDKIVTKGVDGAEPVTKPGECQGKKVSKALIACLQPDRRVEVEVV 384
>gi|325954884|ref|YP_004238544.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323437502|gb|ADX67966.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 439
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 59/155 (38%), Gaps = 5/155 (3%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG---IVVSRIGDMITCYIPVHVSF 82
+ D+ D ED+ ++ + D + V+ F
Sbjct: 278 TTPTAREEATFDLDGLTIKGYKDGLEDQLIRFIKSDDYKNATEESLKDKWFNFDNVNFEF 337
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
S LE L+ +A IL KFP + I I +++D G N +SQ+RAD +K+ +
Sbjct: 338 NSTDQLEAGSHEQLENLAAILKKFPESKIKIGAYSDKKGDDNINKEVSQKRADFLKTE-L 396
Query: 143 QRGVSSNRFISVRGFAYKYPIDTN-DTKVGRQNNQ 176
+ + +S G+ ++ + R ++
Sbjct: 397 GKLGVGEQVVSAEGYGEEFATVPETASDEERAVDR 431
>gi|330830632|ref|YP_004393584.1| major outer membrane protein OmpAII [Aeromonas veronii B565]
gi|328805768|gb|AEB50967.1| Major outer membrane protein OmpAII [Aeromonas veronii B565]
Length = 345
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 46/118 (38%), Gaps = 12/118 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+++ + L + + + +TD IG+ NN +S+ RA
Sbjct: 222 SDVLFAFGKADLKQEGMSALDDLYQQIVDVQPKDGSAVVIGYTDRIGSDANNQRLSEARA 281
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN---------NQRIEIQIF 183
+ +LI + +S++G P+ N + ++R+E+++
Sbjct: 282 QTVADFLISK-GLPADKVSIQGNGASNPVTGNQCDAIKAKAALIDCLGPDRRVEVRVT 338
>gi|251733439|emb|CAR82469.1| peptidoglycan-associated lipoprotein [Sinorhizobium americanum]
Length = 87
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L K+P+ I I+ H D GT + NL + RA + YL
Sbjct: 2 DSSSIRADAQATLARQAQWLAKYPNYAITIEGHADERGTREYNLALGARRAAATREYLAG 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
+GV +NR ++ + + P+ D
Sbjct: 62 QGVPANRMRTIS-YGKEKPVAVCDD 85
>gi|46397579|gb|AAS91718.1| OmpA [Bibersteinia trehalosi]
gi|46397584|gb|AAS91722.1| OmpA [Bibersteinia trehalosi]
gi|46397589|gb|AAS91726.1| OmpA [Bibersteinia trehalosi]
gi|46397594|gb|AAS91730.1| OmpA [Bibersteinia trehalosi]
Length = 360
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 44/117 (37%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + + I + +TD IG NL +SQ RA
Sbjct: 237 SDVLFDFGKANLKSAAKQSLDAAHAEIQNLGLATPAIQVNGYTDRIGKDAPNLALSQRRA 296
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ + +Y++ + + I+ G+ P+ N ++R+E+Q+
Sbjct: 297 ESVANYMVSK-GVAPESITAVGYGKANPVTGNTCDAVKGRKALIACLAPDRRVELQV 352
>gi|85375617|ref|YP_459679.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594]
gi|84788700|gb|ABC64882.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594]
Length = 367
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 32/103 (31%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
E + + +L T + + + H D G N+ +SQ R +
Sbjct: 259 VFFNWDESNITPEAATILNNAVTAYANCGTASVMLAGHADRSGPQTYNVGLSQRRNASV- 317
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + IS F P V N+R+EI
Sbjct: 318 REYLNGRGIPDARISSEAFGESQPRVPTADGVRELQNRRVEIT 360
>gi|254695204|ref|ZP_05157032.1| outer membrane protein OprF [Brucella abortus bv. 3 str. Tulya]
gi|261215567|ref|ZP_05929848.1| TraQ protein [Brucella abortus bv. 3 str. Tulya]
gi|260917174|gb|EEX84035.1| TraQ protein [Brucella abortus bv. 3 str. Tulya]
Length = 172
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 64/186 (34%), Gaps = 19/186 (10%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + +++ C + H+ + L E Q
Sbjct: 2 RTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQ-EELRLQVFPQEPTAQATVWPA 60
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + V V + + + L + + K I ++ TD+
Sbjct: 61 RPPKQTVNVYFPQDVTVFRPTSAQINQ-----LHTLLWPVPKH----INVRGLTDNNCPP 111
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFIS----VRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ +++ RA I ++LI +GV ++R V+ +A P+ GR N+R++
Sbjct: 112 PGDTQVARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPLSP-----GRVLNRRVD 166
Query: 180 IQIFPR 185
I+I +
Sbjct: 167 IEILRK 172
>gi|145298281|ref|YP_001141122.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|1332434|emb|CAA63036.1| outer membrane protein [Aeromonas salmonicida]
gi|142851053|gb|ABO89374.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|1588798|prf||2209353A major outer membrane protein OmpAI
Length = 339
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + + L + + F + +TD IG+ N +S+ RA
Sbjct: 216 SDVLFAFGKDSLKAEGVEALNSLYQQIVDFQPKDGSAVVVGYTDRIGSDAYNQKLSEARA 275
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ ++L+ + + ++V G P+ N ++R+EI++
Sbjct: 276 RTVANFLVSK-GMAASKVAVEGRGEANPVTGNKCDGVKAKAQLISCLAPDRRVEIRV 331
>gi|117618437|ref|YP_858623.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559844|gb|ABK36792.1| outer-membrane protein A [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 368
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 11/116 (9%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATIL-NKFP-STVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ L + + + P V + HTD IG+ N +S++RA
Sbjct: 246 SDVLFEFNKATLKPAASQALDNLFSQIVAANPKDGVATVIGHTDRIGSDAYNQALSEQRA 305
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG--------RQNNQRIEIQI 182
+ YLI + + V G PI N+ G ++R+E+++
Sbjct: 306 RSVADYLIAK-GLFADKVRVEGRGKSSPITGNNCSSGSKPALIACLAPDRRVEVRL 360
>gi|90022215|ref|YP_528042.1| OmpA family protein [Saccharophagus degradans 2-40]
gi|89951815|gb|ABD81830.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 230
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/211 (11%), Positives = 63/211 (29%), Gaps = 30/211 (14%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L + + +G +++ + T ++ G + L
Sbjct: 14 ALLIVSNSAFAGETKTQKQRDNDKAAATLSTMVIGGLVGGPVGAFIGAVTGSLAAEHADT 73
Query: 66 SRIGDMITCYIPVH-----------------------------VSFVSEVFLEKKFLPML 96
+T + + L + L +
Sbjct: 74 KHQQQELTIAMNEVEEMKAQLEKDQQRASAMEQKAAEKLEFQVLFTTGSDELSQTDLKRV 133
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A LN P + ++ H D GT + N ++S+ER + L ++G+ +R ++
Sbjct: 134 NSVARYLNTNPELKVNLEGHADPRGTDEYNYVLSEERVKSVIKALEEKGIDRSR-VTYSA 192
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ ++R++I + + +
Sbjct: 193 YGSDLSTAYQGDLEAYALDRRVKIDVVMKTD 223
>gi|77464751|ref|YP_354255.1| OmpA family protein [Rhodobacter sphaeroides 2.4.1]
gi|77389169|gb|ABA80354.1| OmpA family protein [Rhodobacter sphaeroides 2.4.1]
Length = 512
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNN 126
D ++ LE + L + +L +F + + +D G + N
Sbjct: 392 ADRLSITFR---FEEGTDSLEPQSRESLSELIKLLEIGRFRGQQLMLVGFSDGRGPARGN 448
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
L +S+ERA+ + + L + + V GF P+ + T GR+ N+R+E+ + P
Sbjct: 449 LDLSRERAEAVAAALREAVPELGPPL-VEGFGEALPLACDTTVAGRRMNRRVELWLRP 505
>gi|325915795|ref|ZP_08178096.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
vesicatoria ATCC 35937]
gi|325537992|gb|EGD09687.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
vesicatoria ATCC 35937]
Length = 412
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 62/192 (32%), Gaps = 14/192 (7%)
Query: 5 LGLSMFIMTTI-------SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
LGLS+ ++ + + S + + L + D K Q +
Sbjct: 221 LGLSVLVVAFVWMQTRLNALSAPISAQVAQWGLAPATPPDATPLPPPQVRLKQLLATQQR 280
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ G + V +E + ++ IA +++ P VI + HT
Sbjct: 281 AGLLSVEEQADGQTRVRLSSAAMFASGGVEVEPEQRGLIAQIAAAIDQLPGRVIVV-GHT 339
Query: 118 DSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGR 172
D + +N +S RA + L + R + G P+ R
Sbjct: 340 DDVPVRSLRFADNYALSGARAAAVAQLLRTHLATPGR-VEALGAGDSQPVAQPVQLPANR 398
Query: 173 QNNQRIEIQIFP 184
N+R+EI P
Sbjct: 399 ARNRRVEILFQP 410
>gi|269138690|ref|YP_003295391.1| flagellar motor protein [Edwardsiella tarda EIB202]
gi|267984351|gb|ACY84180.1| flagellar motor protein [Edwardsiella tarda EIB202]
gi|304558696|gb|ADM41360.1| Flagellar motor rotation protein MotB [Edwardsiella tarda FL6-60]
Length = 332
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 73/190 (38%), Gaps = 26/190 (13%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRI 68
G G +K+ + D D + L + + + + + ++++ +
Sbjct: 86 GGGDDVTQKEGEVRKFAEDPDPQTRAEQMRLKRLRERLEQVIINDPRLKALRPHLMINMM 145
Query: 69 GDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + I + +E +L+ IA ILN+ P+ I++ HTD +
Sbjct: 146 DEGLRIQIIDSQNRPMFQNGSAQVEPYMRNILRAIAPILNELPN-KISLSGHTDDLPYAN 204
Query: 125 -----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK---YPIDTNDTKVGRQNNQ 176
+N +S +RA+ + LI G++ N+ + V G A + N N+
Sbjct: 205 GERGYSNWELSADRANASRRELIAGGLAGNKILRVVGMADTMNLRNLAGNA-----AVNR 259
Query: 177 RIEIQIFPRG 186
RI I + +
Sbjct: 260 RISILVLNKA 269
>gi|260459525|ref|ZP_05807780.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
gi|259035079|gb|EEW36335.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
Length = 121
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
I + ++ IA L + + I+ HTD++G+ ++N ++
Sbjct: 5 IDIQSINFAFGSAAISSSQYGKIENIADALKRILRRDRGARVLIEGHTDAVGSFQSNQVL 64
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S++RA +K L++ + G+ ++ + + N+R+ ++
Sbjct: 65 SEQRAASLKRTLVREFGVPGHALETVGYGEEFLLVPTQNE--NWQNRRVTLR 114
>gi|251733457|emb|CAR82478.1| pal [Rhizobium leguminosarum]
Length = 87
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L ++P+ I ++ H D GT + NL + RA K YL
Sbjct: 2 DSSSIRADASQTLDRQAQWLARYPNYQITVEGHADERGTREYNLALGARRAAAAKDYLAS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RGV + R ++ + + P+ D
Sbjct: 62 RGVPAQRLKTIS-YGKERPVAVCDD 85
>gi|222147584|ref|YP_002548541.1| flagellar motor protein MotB [Agrobacterium vitis S4]
gi|221734572|gb|ACM35535.1| flagellar motor protein [Agrobacterium vitis S4]
Length = 444
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 58/179 (32%), Gaps = 14/179 (7%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD------TGIVVSRIG 69
+ + + + D+ + + ++ G++V
Sbjct: 263 VAIAVPKARPDPKQVAREEQNASADSDQTQQADQLKQQIASEIGGVAGKLAEGLIVQPAE 322
Query: 70 DMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA--IQSHTDSIGTL 123
+ + + V K+ + ++ I +L + V+ G
Sbjct: 323 GGLLITLTDQSQAPMFDVGSAVPRKEMVLAMEKIGKLLAERQGAVVIRGHTDARQYKGPD 382
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S RA L++ G++ NR V GFA + + D N+RIEI +
Sbjct: 383 NDNWGLSMSRAHSAYYMLVRGGLAQNRITQVSGFADRRLLKPEDPLA--AANRRIEILV 439
>gi|103487471|ref|YP_617032.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
gi|98977548|gb|ABF53699.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
Length = 373
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 2/104 (1%)
Query: 79 HVSFVSEVFLEKKFLPMLQ-LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + L I+ T I + H D G+ + N+ +S+ R D +
Sbjct: 264 VYFDWDQSNITPEAASTLDNAISAYNRGCTGTQIMLAGHADRSGSARYNVGLSERRNDAV 323
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ S+ IS + F P V N+R+EI
Sbjct: 324 -RSYLTARGISDGSISAQAFGETRPAVATADGVRNDQNRRVEIT 366
>gi|296158523|ref|ZP_06841353.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295891091|gb|EFG70879.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 359
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 11/129 (8%)
Query: 62 GIVVSRIGDMITCYIPVHVSFV--SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTD 118
+ +R IT F E + L +AT L P+ + I + D
Sbjct: 227 PVPAARPQQKITLKADSLFRFNGGDEAAMLPAGKRQLDDVATGLKNAPALHELKITGYAD 286
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-TK-----VGR 172
+G NL +S +RA ++ YL GVS ++ +G P+ TK
Sbjct: 287 RLGDKSYNLDLSMQRARTVERYLRAHGVSLP--MTAQGRGSANPLVDCRRTKRDALMQCL 344
Query: 173 QNNQRIEIQ 181
N+R+EI+
Sbjct: 345 APNRRVEIE 353
>gi|26990523|ref|NP_745948.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|24985500|gb|AAN69412.1|AE016577_7 periplamic phosphate-binding protein [Pseudomonas putida KT2440]
Length = 435
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 8/167 (4%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSS--LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
A+ + + L + + + + Q R + V
Sbjct: 271 ANPKPQAKALVDFAQSPAGQAIIAQQGFVSQQIKALSVAPQSDMPPPYRTLARQAQRLSV 330
Query: 79 HV-SFVSEVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERAD 135
+ L+ K L +Q + L + + D T L+S+ RA
Sbjct: 331 NFRFQEGSASLDNKALRDVQRVTEYLRQAGKLQGKAVLVGFGDPKETPGRAALLSRLRAQ 390
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ L + GV + V G + P+ N+ + GR N+R+E+ +
Sbjct: 391 AVRRELARGGV---EVLQVTGMGDELPVAGNELEQGRLRNRRVEVWV 434
>gi|197105150|ref|YP_002130527.1| chemotaxis MotB protein [Phenylobacterium zucineum HLK1]
gi|196478570|gb|ACG78098.1| chemotaxis MotB protein [Phenylobacterium zucineum HLK1]
Length = 301
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 70/184 (38%), Gaps = 20/184 (10%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMI 72
AS+ D + KR ++ A + LQD I++ + + +
Sbjct: 115 ASKSDSLEAASTQALRDALQKREEAAFASAAQSLRQSLQDMPELAELSKNIIIDQTPEGL 174
Query: 73 TCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI---GTLKN 125
+ + + +L+ ++ ++N+ P+ ++I HT + ++
Sbjct: 175 RIQLVDQEGRSMFNAGSSQPNDRAKLLLRAVSKVINQLPN-RVSIYGHTSANANGSRAES 233
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-TKVGRQNNQRIEIQIFP 184
+ +S RAD + L GV +R V G A P+ +D T G N+RI I +
Sbjct: 234 DWPLSAARADASRRILQGSGVDPDRVYQVSGKAASEPLYPDDPTLAG---NRRIAIVLLR 290
Query: 185 RGNI 188
+
Sbjct: 291 EAPV 294
>gi|152985187|ref|YP_001351001.1| flagellar motor protein MotB [Pseudomonas aeruginosa PA7]
gi|150960345|gb|ABR82370.1| chemotaxis protein MotB [Pseudomonas aeruginosa PA7]
Length = 342
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 9/142 (6%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ ++R G I + + + L+ F +L +A + + P+ I
Sbjct: 146 LKDFKDQIHFEITRDGLRIQIVDAANRPMFDLGSARLQPYFEDILLAMAETIRQVPN-KI 204
Query: 112 AIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+I HTD+ N +S RA+ + L+ G + V G+A D D
Sbjct: 205 SISGHTDAKPYAGNGDFGNWELSANRANAARRALVAGGYPETQISQVVGYASARLFDDKD 264
Query: 168 TKVGRQNNQRIEIQIFPRGNIK 189
N+RI+I + R K
Sbjct: 265 PL--NPVNRRIDIVVLTRKAQK 284
>gi|197336852|ref|YP_002158687.1| OmpA family protein [Vibrio fischeri MJ11]
gi|197314104|gb|ACH63553.1| OmpA family protein [Vibrio fischeri MJ11]
Length = 274
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 1/125 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + + + + L K++ L + +LN+ + I H D
Sbjct: 135 NNGNSDIELAQKIHDLLNRDNQFAFNSAELNPKYIVNLSEASQLLNQHKDFKLLITGHAD 194
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
++G N ++ ERA +K + S + I V P + R N+R+
Sbjct: 195 ALGEEDANQNLALERAKQVKR-YLSIFGLSQQRIHVDSVGSNDPYLSGTEPHVRLTNRRV 253
Query: 179 EIQIF 183
I++
Sbjct: 254 TIELL 258
>gi|59714204|ref|YP_206979.1| outer membrane protein [Vibrio fischeri ES114]
gi|59482452|gb|AAW88091.1| outer membrane protein [Vibrio fischeri ES114]
Length = 274
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 1/125 (0%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + + + + L K++ L + +LN+ + I H D
Sbjct: 135 NNGNSDIELAQKIHDLLNRDNQFAFNSAELNPKYIVNLSEASQLLNQHKDFKLLITGHAD 194
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
++G N ++ ERA +K + S + I V P + R N+R+
Sbjct: 195 ALGEEDANQNLALERAKQVKR-YLSIFGLSQQRIHVDSVGSNDPYLSGTEPHVRLTNRRV 253
Query: 179 EIQIF 183
I++
Sbjct: 254 TIELL 258
>gi|329114347|ref|ZP_08243109.1| Outer membrane protein [Acetobacter pomorum DM001]
gi|326696423|gb|EGE48102.1| Outer membrane protein [Acetobacter pomorum DM001]
Length = 376
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 7/110 (6%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH------TDSIGTLKNNLLISQE 132
+ L + ++ A +T I + + K NL +S
Sbjct: 267 VFFDWDKSVLTARARQIVAEAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNLGLSLR 326
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD +K+ LI R I V G+ +P+ N+R+EI +
Sbjct: 327 RADSVKAELI-RDGVPASAIDVHGYGEAHPLVPTGPNTREPQNRRVEIIL 375
>gi|258541881|ref|YP_003187314.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01]
gi|256632959|dbj|BAH98934.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01]
gi|256636016|dbj|BAI01985.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-03]
gi|256639071|dbj|BAI05033.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-07]
gi|256642125|dbj|BAI08080.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-22]
gi|256645180|dbj|BAI11128.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-26]
gi|256648235|dbj|BAI14176.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-32]
gi|256651288|dbj|BAI17222.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654279|dbj|BAI20206.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-12]
Length = 375
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 7/110 (6%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH------TDSIGTLKNNLLISQE 132
+ L + ++ A +T I + + K NL +S
Sbjct: 266 VFFDWDKSVLTARARQIVAEAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNLGLSLR 325
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD +K+ LI R I V G+ +P+ N+R+EI +
Sbjct: 326 RADSVKAELI-RDGVPASAIDVHGYGEAHPLVPTGPNTREPQNRRVEIIL 374
>gi|153833424|ref|ZP_01986091.1| OmpA family protein [Vibrio harveyi HY01]
gi|148870312|gb|EDL69242.1| OmpA family protein [Vibrio harveyi HY01]
Length = 235
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/205 (12%), Positives = 65/205 (31%), Gaps = 26/205 (12%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ +F+ +++ A E+ K+ + + L++ + G +
Sbjct: 28 LMMVFLFISVALMRDAMVERDKIKEVAETYQKTQQAIYIALLEEFAKDL----DTWGAEI 83
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPST--VIAIQSHTDS 119
R + P + + L ++F +L +L ++ I I+ HT S
Sbjct: 84 DRDTLSVNFTAPEVLFGNGKANLTQQFQIILNDFFPRYLEVLEQYKPIIQEIKIEGHTSS 143
Query: 120 IGT--------LKNNLLISQERADVI-------KSYLIQRGVSSNRFISVRGFAYKYPID 164
NN+ +SQ R + Q ++ G++ +
Sbjct: 144 RWNHDSSDYEAYFNNMRLSQSRTRAVLGYVMKLDDVRAQHYGWVKNNVAAVGYSSSKAVV 203
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNIK 189
D + ++R+ ++ +
Sbjct: 204 K-DNVEDEKRSRRVSFRVITNAEEQ 227
>gi|118588924|ref|ZP_01546331.1| hypothetical protein SIAM614_12768 [Stappia aggregata IAM 12614]
gi|118438253|gb|EAV44887.1| hypothetical protein SIAM614_12768 [Stappia aggregata IAM 12614]
Length = 234
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 62/162 (38%), Gaps = 16/162 (9%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+R++ + + G+ D E E +VV + I + VS
Sbjct: 78 TRDECNPNAKPDEGGQVAVSQDGAKSDGGETE-------QTLVVDPETNAIDAAFNLLVS 130
Query: 82 F-VSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
F + L L+ A +N I+ HTD IG+ N +S++RA +
Sbjct: 131 FEYASARLSPSAQANLREFAKGINDPDLAKATFVIEGHTDGIGSTSYNQRLSEDRAQAVT 190
Query: 139 SYLIQRGVSSNRFISVRGFAYKYP-IDTNDTKVGRQNNQRIE 179
+L+ GVS +R +V + P + + N+R+E
Sbjct: 191 QFLVNLGVSRDRLKTVA-YGETRPKVADVNDPA----NRRVE 227
>gi|301165251|emb|CBW24822.1| putative outer membrane protein [Bacteroides fragilis 638R]
Length = 381
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 58/150 (38%), Gaps = 3/150 (2%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLE 89
++K + ++ + + V I D + C + ++ F +
Sbjct: 216 IGGKSKHAAPVVRYVEIEKPVERIVERVVEKKVEVPAIIDTMACDLLENIHFEFDRDVIT 275
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L +A +L +P + I +TD+ G+ NL +S RA+ + + LI R
Sbjct: 276 ATSERTLDRLAELLKSYPDSRFLITGYTDAKGSDSYNLTLSARRAEKVHAALIGR-GVPA 334
Query: 150 RFISVRGFAYKYPIDTNDTKVG-RQNNQRI 178
R I RG + I + R+ ++++
Sbjct: 335 RMIKWRGVGKRAAIISATAADNIREGDRKV 364
>gi|298482993|ref|ZP_07001174.1| outer membrane protein [Bacteroides sp. D22]
gi|298270737|gb|EFI12317.1| outer membrane protein [Bacteroides sp. D22]
Length = 397
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 58/150 (38%), Gaps = 3/150 (2%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLE 89
++K + ++ + + V I D + C + ++ F +
Sbjct: 232 IGGKSKHAAPVVRYVEIEKPVERIVERVVEKKVEVPAIIDTMACDLLENIHFEFDRDVIT 291
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L +A +L +P + I +TD+ G+ NL +S RA+ + + LI R
Sbjct: 292 ATSERTLDRLAELLKSYPDSRFLITGYTDAKGSDSYNLTLSARRAEKVHAALIGR-GVPA 350
Query: 150 RFISVRGFAYKYPIDTNDTKVG-RQNNQRI 178
R I RG + I + R+ ++++
Sbjct: 351 RMIKWRGVGKRAAIISATAADNIREGDRKV 380
>gi|237750612|ref|ZP_04581092.1| flagellar motor rotation protein MotB [Helicobacter bilis ATCC
43879]
gi|229373702|gb|EEO24093.1| flagellar motor rotation protein MotB [Helicobacter bilis ATCC
43879]
Length = 255
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPM-LQLIATILNKFP-ST 109
+ +QD G+ + +I T +P + F L + L L+AT + K P
Sbjct: 104 QLSNLIQDGGL-LEQIEQGTTLRLPSDILFEPGTAELVNQDRKTELDLLATAIAKMPPEV 162
Query: 110 VIAIQSHTD--SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I+ +TD S +NN ++ RA + YL+ RGV R +S + PI N
Sbjct: 163 TINIRGYTDNSSPAGYRNNYELAAARASNVMEYLMSRGVDPAR-LSFTSYGQYNPIVPNT 221
Query: 168 TKVGRQNNQRIEI 180
++V R+ N R+E+
Sbjct: 222 SEVNRRANNRVEV 234
>gi|26989809|ref|NP_745234.1| OmpA domain-containing protein [Pseudomonas putida KT2440]
gi|24984708|gb|AAN68698.1|AE016499_3 OmpA domain protein [Pseudomonas putida KT2440]
Length = 831
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA+ L P+ I I H D +G + NL +S++
Sbjct: 712 SDTLFAFGRADFQSLKNEGQHQLSAIASKLLNTPNIGKIIISGHADQLGDSQGNLQVSKQ 771
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA I + + +G + P+ D + R N+R+EI++
Sbjct: 772 RAQTI-RTYLVGKGVPAELVVAQGEGSRKPLVNCDMQQPRTQLIKCLEPNRRVEIEV 827
>gi|148547849|ref|YP_001267951.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148511907|gb|ABQ78767.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 831
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVF---LEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ + L IA+ L P+ I I H D +G + NL +S++
Sbjct: 712 SDTLFAFGRADFQSLKNEGQHQLSAIASKLLNTPNIGKIIISGHADQLGDSQGNLQVSKQ 771
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
RA I + + +G + P+ D + R N+R+EI++
Sbjct: 772 RAQTI-RTYLVGKGVPAELVVAQGEGSRKPLVNCDMQQPRTQLIKCLEPNRRVEIEV 827
>gi|187927866|ref|YP_001898353.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12J]
gi|241662454|ref|YP_002980814.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12D]
gi|187724756|gb|ACD25921.1| OmpA/MotB domain protein [Ralstonia pickettii 12J]
gi|240864481|gb|ACS62142.1| OmpA/MotB domain protein [Ralstonia pickettii 12D]
Length = 218
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 9/114 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ + L + + LN V+ HTDS G+ K N +S RA+ +
Sbjct: 100 DTLFDFDKAVLKPEGKAKLDDLVSKLNGINLEVVIAVGHTDSFGSDKYNDRLSVRRAEAV 159
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--------KVGRQNNQRIEIQIF 183
K YL+ + + G + + +Q N+R+++++
Sbjct: 160 KGYLVSK-GIEANRVYTEGKGKRQLKVDPKSCKGARKAQIACQQPNRRVDVEVV 212
>gi|294635726|ref|ZP_06714192.1| chemotaxis MotB protein [Edwardsiella tarda ATCC 23685]
gi|291090938|gb|EFE23499.1| chemotaxis MotB protein [Edwardsiella tarda ATCC 23685]
Length = 332
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 26/190 (13%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRI 68
G G +K + D D + L + + + + + ++++ +
Sbjct: 86 GGGDDVTQKSGEVQRFAADPDPEQRVEQMRLKRLRERLEKVIINDPRLKALRPHLMINMM 145
Query: 69 GDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + I + +E +L+ IA ILN+ P+ I++ HTD +
Sbjct: 146 DEGLRIQIIDSQNRPMFQNGSARVEPYMRDILRAIAPILNELPN-KISLSGHTDDLPYAN 204
Query: 125 -----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK---YPIDTNDTKVGRQNNQ 176
+N +S +RA+ + L+ G++ N+ + V G A + N N+
Sbjct: 205 GERGYSNWELSADRANASRRELVIGGLAGNKILRVVGMADTMNLRHLAGNA-----AVNR 259
Query: 177 RIEIQIFPRG 186
RI I + +
Sbjct: 260 RISILVLTKA 269
>gi|197122876|ref|YP_002134827.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|196172725|gb|ACG73698.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
Length = 259
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 7/126 (5%)
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD--- 118
+ V G +T + F + L + L +L IA + + ++ HTD
Sbjct: 119 VSVLVEGRRLTVRLAATEFFDPGQAALRPQALALLDAIAAEVVPL-ERPLRVEGHTDETP 177
Query: 119 --SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
S G +N +S RA + YL Q + ++ G +P+ T+ T + N+
Sbjct: 178 VGSGGRWMSNWELSAARAATVVGYLEQAHAARPALLAAVGLGSAHPLSTDATPEAHERNR 237
Query: 177 RIEIQI 182
R+E+ +
Sbjct: 238 RVELVL 243
>gi|262173884|ref|ZP_06041561.1| outer membrane protein [Vibrio mimicus MB-451]
gi|261891242|gb|EEY37229.1| outer membrane protein [Vibrio mimicus MB-451]
Length = 189
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 57/180 (31%), Gaps = 14/180 (7%)
Query: 14 TISGC---GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGD 70
++ C + KK T + + + + Q G+
Sbjct: 16 AMANCFNGSSEQVQIKKHVSTHLITTQVRGRLSETQVQHTNQILNESKQQVGVKHRSDLC 75
Query: 71 MITCYIPVHVSFV--SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ ++ L +LQ +++ I ++ H D G K N
Sbjct: 76 TYDEQSQSLLLHYPFNKYQLSGPHQEVLQTYVSMV--DSQYKIVVEGHADQTGNPKYNQA 133
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN---NQRIEIQIFPR 185
+S+ RA + YL NR + +GF P+ T N+R+ + I P+
Sbjct: 134 LSERRAGAVTRYLRDTLKLGNRIVE-KGFGESAPVC---TVQENAQTGCNRRVVLTIQPQ 189
>gi|78484704|ref|YP_390629.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78362990|gb|ABB40955.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2]
Length = 241
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 41/175 (23%)
Query: 46 SLDKAEDEFQ--------MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
LD E + + GI ++ + + + + ++LP +
Sbjct: 65 YLDALETQQRLGMNWLHIENTLSKGIKITMQEE---VFSSQDLFASGRAKINPRYLPYIN 121
Query: 98 LIATILNK---------FP-------------STVIAIQSHTDSIGTLKNNLLISQE--- 132
LN+ P + I+ HTD+ K L S
Sbjct: 122 RFVGFLNQLKLETFQQRHPLQVKSITRPGESFQVTVRIEGHTDATPLAKTALYQSNFELS 181
Query: 133 --RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA I + L S+ G+ +P+ N N+R+EI + P+
Sbjct: 182 TFRAYAIMNVLQIYSGLPESLFSIAGYGSFHPVTRNPYD---SKNRRVEIYLIPQ 233
>gi|17988380|ref|NP_541013.1| outer membrane protein OprF [Brucella melitensis bv. 1 str. 16M]
gi|225685925|ref|YP_002733897.1| TraQ protein [Brucella melitensis ATCC 23457]
gi|256042982|ref|ZP_05445928.1| TraQ protein [Brucella melitensis bv. 1 str. Rev.1]
gi|256112034|ref|ZP_05452979.1| TraQ protein [Brucella melitensis bv. 3 str. Ether]
gi|256261862|ref|ZP_05464394.1| outer membrane protein OprF [Brucella melitensis bv. 2 str. 63/9]
gi|260564216|ref|ZP_05834701.1| outer membrane protein OprF [Brucella melitensis bv. 1 str. 16M]
gi|265989419|ref|ZP_06101976.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993480|ref|ZP_06106037.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|81850946|sp|Q8YDY8|YU36_BRUME RecName: Full=Type IV secretion system putative outer membrane
lipoprotein BMEII0036; Flags: Precursor
gi|17984159|gb|AAL53277.1| outer membrane protein oprf [Brucella melitensis bv. 1 str. 16M]
gi|225642030|gb|ACO01943.1| TraQ protein [Brucella melitensis ATCC 23457]
gi|260151859|gb|EEW86952.1| outer membrane protein OprF [Brucella melitensis bv. 1 str. 16M]
gi|262764350|gb|EEZ10382.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263000088|gb|EEZ12778.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263091339|gb|EEZ15875.1| outer membrane protein OprF [Brucella melitensis bv. 2 str. 63/9]
Length = 172
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 64/186 (34%), Gaps = 19/186 (10%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + +++ C + H+ + L E Q
Sbjct: 2 RTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQ-EELRLQVFPQEPTAQATMWPA 60
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + V V + + + L + + K I ++ TD+
Sbjct: 61 RPPKQTVNVYFPQDVTVFRPTSAQINQ-----LHTLLWPVPKH----INVRGLTDNSCPP 111
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFIS----VRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ +++ RA I ++LI +GV ++R V+ +A P+ GR N+R++
Sbjct: 112 PGDTQVARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPLSP-----GRVLNRRVD 166
Query: 180 IQIFPR 185
I+I +
Sbjct: 167 IEILRK 172
>gi|117618280|ref|YP_855820.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559687|gb|ABK36635.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 351
Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 47/118 (39%), Gaps = 12/118 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + + L+ + + + +TD IG+ NN +S+ RA
Sbjct: 220 SDVLFAFGKAELKPEGMQALESLYQQIADVKPKDGNAVVMGYTDRIGSDANNQALSEARA 279
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQIF 183
+ ++LI + +S++G P+ D R ++R+E+++
Sbjct: 280 STVANFLIGK-GLPADKVSIQGNGESNPVTGSQCDAIKARAALIDCLAPDRRVEVRVT 336
>gi|260779337|ref|ZP_05888229.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605501|gb|EEX31796.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
BAA-450]
Length = 330
Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 56/154 (36%), Gaps = 12/154 (7%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLP 94
+R + ++ + + V+ + + L F
Sbjct: 125 TQERLAALAKVIKEAVRQISAQGNVNVTVTPQGLRIVLQDDYKQHMFGRGGSELTPFFED 184
Query: 95 MLQLIATILNKFPSTVIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+L +A + + + +I I HTDS ++N +S RA+ + L+ G+
Sbjct: 185 LLLALAPVFKRVENPLI-ISGHTDSTRFKGHVERRSNWELSASRANAARHTLVAGGMPDE 243
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R + V G + + + N + N+RIE+ I
Sbjct: 244 RVLQVTGMSDRALL--NGDEPESSENRRIELFIL 275
>gi|257125830|ref|YP_003163944.1| Outer membrane protein and related peptidoglycan- associated
(lipo)protein-like protein [Leptotrichia buccalis
C-1013-b]
gi|257049769|gb|ACV38953.1| Outer membrane protein and related peptidoglycan- associated
(lipo)protein-like protein [Leptotrichia buccalis
C-1013-b]
Length = 254
Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 53/127 (41%), Gaps = 8/127 (6%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN----KFPSTVIAIQSHTDSIGTL 123
D + + + + + K ++ + + I +
Sbjct: 119 EKDGKIVKMIIRGFPIDKEEVNKTEKQAIKEEIEYMLNVFFENEEFEIVGYADKTENNKN 178
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
K +LL +++ ++ +K +++ + + I G + PIDTNDT GR NN+R+EI +
Sbjct: 179 KLSLLRAEKMSEFLKQNGLRKDIKITKMI---GKGSENPIDTNDTVEGRYNNRRVEI-LL 234
Query: 184 PRGNIKK 190
G +K+
Sbjct: 235 KNGKVKE 241
>gi|213426377|ref|ZP_03359127.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
Length = 309
Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 66/184 (35%), Gaps = 20/184 (10%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMI 72
+++ + N ++ S L+K + ++ I + + G I
Sbjct: 92 TQQQGEVEKQPNIDELEKTVEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRI 151
Query: 73 TC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
+ +E +L+ IA +LN P+ I++ HTD +
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPN-RISLAGHTDDFPYANGEKGYS 210
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + + V G A + N+RI + + +
Sbjct: 211 NWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNK 268
Query: 186 GNIK 189
+
Sbjct: 269 QAEQ 272
>gi|61655673|gb|AAX49323.1| PlpD [Mannheimia haemolytica]
gi|61655675|gb|AAX49324.1| PlpD [Mannheimia haemolytica]
Length = 217
Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G+ + + L K ++ +A L + + + +TD +G+ NL
Sbjct: 108 NGNSSFALTGDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRLGSAAYNL 167
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+SQ R++ +K+ L+Q+GV++ I G+ + D + G+
Sbjct: 168 DLSQRRSNTVKARLVQQGVTAQ--IEAVGYGKANQVKACDGETGQAL 212
>gi|327403146|ref|YP_004343984.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327318654|gb|AEA43146.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 249
Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ ++ + +P L+ + IL + S + + H + +S +RA+ +
Sbjct: 149 FENANAVVKAESIPNLEKLNRILLEDTSLFVRLNGHVCC----TSAQELSFQRANTVM-T 203
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ + I GF+ + ++++ N+R+E
Sbjct: 204 YLLKHGIPQSRIYAEGFSNTQLLVPDNSEENMAINRRVE 242
>gi|251733477|emb|CAR82488.1| pal [Sinorhizobium fredii]
gi|251733479|emb|CAR82489.1| pal [Sinorhizobium fredii]
gi|251733481|emb|CAR82490.1| pal [Sinorhizobium fredii]
gi|251733483|emb|CAR82491.1| pal [Sinorhizobium fredii]
gi|251733519|emb|CAR82509.1| pal [Sinorhizobium xinjiangense]
Length = 87
Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L K+P+ I ++ H D GT + NL + RA + YL
Sbjct: 2 DSSSIRADAQATLARQAQWLAKYPNYAITVEGHADERGTREYNLALGARRAAATREYLAG 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
+GV +NR ++ + + P+ D
Sbjct: 62 QGVPANRMRTIS-YGKEKPVAVCDD 85
>gi|261856832|ref|YP_003264115.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261837301|gb|ACX97068.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 373
Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V R + ++ ++ L +A LN I + HTD IG+
Sbjct: 242 VERHAPKKVTLSADSLFDFNKSVVKPAGKRALDQLARDLNGTDYDQIMVIGHTDRIGSHA 301
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-------TNDTK---VGRQN 174
NL +S RA+ +K YLI G IS +G P+ + T Q
Sbjct: 302 YNLKLSTRRAEAVKDYLISSGQIPAHKISAKGVDGADPVTKPGDCVGSKATPALIACLQP 361
Query: 175 NQRIEIQI 182
++R+E+ +
Sbjct: 362 DRRVEVDV 369
>gi|162147969|ref|YP_001602430.1| outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5]
gi|209542586|ref|YP_002274815.1| OmpA/MotB domain-containing protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|172046688|sp|P84838|OMPC_GLUDA RecName: Full=Outer membrane protein; AltName: Full=OMPC; Flags:
Precursor
gi|161786546|emb|CAP56128.1| Outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5]
gi|209530263|gb|ACI50200.1| OmpA/MotB domain protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 378
Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 7/110 (6%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH------TDSIGTLKNNLLISQE 132
L + ++ A +T I + + K N+ +S
Sbjct: 269 VFFDWDRSDLTARAREIVAEAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNMGLSIR 328
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA +K+ LI R I + G+ ++P+ N+R+EI +
Sbjct: 329 RAQSVKAELI-RDGVPTGAIDIHGYGEQHPLVPTGPNTREPQNRRVEIIL 377
>gi|114706993|ref|ZP_01439892.1| hypothetical protein FP2506_03039 [Fulvimarina pelagi HTCC2506]
gi|114537543|gb|EAU40668.1| hypothetical protein FP2506_03039 [Fulvimarina pelagi HTCC2506]
Length = 710
Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLL 128
+ + ++ + L+ +A +++ P I+ HTD++GT NL
Sbjct: 585 RIDLNTINFGFGSAEISQEQVSNLEALAQAISEVIDQNPDETFIIEGHTDAVGTDLANLK 644
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
+S +RA+ + + L + +G+ ++ DT+ N+R+ + +I P
Sbjct: 645 LSDQRAETVAAALTNFFDVPPENLITQGYGEQFLKV--DTQDQNAENRRVTVRRITP 699
>gi|302877290|ref|YP_003845854.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
ES-2]
gi|302580079|gb|ADL54090.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
Length = 217
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 68/214 (31%), Gaps = 34/214 (15%)
Query: 1 MIKELGLSMFIMTTISG--CGLASREKKKVFLHKSNDT--------------DIVNKRFG 44
M + L +S C +K + +
Sbjct: 1 MKTFICLFGLTAVFVSSLVCAQEVADKSGYLTDSAGNVVRNAYGDCWRTGYWTPAMAISE 60
Query: 45 SSLDKAEDEFQMQLQDTGIVV---SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ-LIA 100
D + E + Q I V + I + ++ + +L I
Sbjct: 61 CDPDLVKKEVAIVPQQKEIPVIPEKIVPPAIVRLNAGTLFDFDRAEVKPEGKTVLDEKIV 120
Query: 101 TILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
T + T + I H D IG+ + N +S+ RA+ ++ YL+++ + +SV+G
Sbjct: 121 TGMKLHTDTGPLLIIGHADRIGSERYNQRLSERRANAVRDYLVEQ-GVGAQRLSVQGKGE 179
Query: 160 KYPI-DTNDTKVGR-----------QNNQRIEIQ 181
P +N R Q ++R+ ++
Sbjct: 180 SEPDPVSNTGVSCRGMRGERLITCLQPDRRVTVE 213
>gi|251733461|emb|CAR82480.1| pal [Agrobacterium tumefaciens]
Length = 87
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ LQ A L ++P+ I ++ H D GT + NL + RA + +L
Sbjct: 2 DSTSIRADAQQTLQRQAQWLARYPNYAITVEGHADERGTREYNLALGARRAAATRDFLAS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
+GV +NR ++ + + P+ D
Sbjct: 62 QGVPANRMKTIS-YGKEKPVAVCDD 85
>gi|157373190|ref|YP_001471790.1| OmpA/MotB [Shewanella sediminis HAW-EB3]
gi|157315564|gb|ABV34662.1| OmpA/MotB [Shewanella sediminis HAW-EB3]
Length = 336
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 55/149 (36%), Gaps = 10/149 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLPMLQLIATILN 104
+ + + + + + I +V ++ F +L + +L
Sbjct: 150 EVDSVITEVNLSANVEIKVVPQGVRILIHDNVHQFMFTRGSSNMKPYFEDLLMALGPLLG 209
Query: 105 KFPSTVIAIQSHTDSIGTL---KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ I+I HTDS N +S +RA + + L GV ++ I V G A +
Sbjct: 210 GVEN-KISISGHTDSTPYAGKTFTNWELSSKRALLARRVLEYGGVKRHQIIQVTGMADQS 268
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
P ND N+RIE+ + K+
Sbjct: 269 PYIQNDPAA--AANRRIEMLVLTTSAEKQ 295
>gi|89890715|ref|ZP_01202224.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
gi|89516860|gb|EAS19518.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
Length = 368
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 9/158 (5%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV--HVSFVSEVFLEKKFL 93
+D + + + G+ V D L
Sbjct: 212 SDAATTESVVPSTQQTITREKLVSKGGLTVWSEVDCALVEENNLQINWATGSSTLTAADK 271
Query: 94 PMLQ-LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+ + ++LN P + + + SHTDS G+ +N +S+ RA + +YLI + +N I
Sbjct: 272 AEIDAKLLSVLNNTPGSKVEVASHTDSRGSKTSNQALSERRAQSVANYLISK-GINNSRI 330
Query: 153 SVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
G+ + T+ + N+R ++
Sbjct: 331 VANGYGENRLKNRCADGVSCTEREHKANRRTTFRLINN 368
>gi|194288903|ref|YP_002004810.1| outer membrane protein, ompa domain [Cupriavidus taiwanensis LMG
19424]
gi|193222738|emb|CAQ68741.1| putative outer membrane protein, ompA domain [Cupriavidus
taiwanensis LMG 19424]
Length = 217
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 9/114 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ + L + + L VI HTDS G+ K N +S RA+ +
Sbjct: 99 DTLFDFDKAVLKPEGKAKLDDLVSKLQGITLEVIIAVGHTDSFGSDKYNDRLSIRRAESV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--------KVGRQNNQRIEIQIF 183
K+YL+ + + G + + +Q N+R+E+++
Sbjct: 159 KAYLVSK-GVEANRVYTEGKGKRQLKVDPKSCKGNRKSQIACQQPNRRVEVEVV 211
>gi|113866814|ref|YP_725303.1| outer membrane protein or related peptidoglycan-associated
(lipo)protein [Ralstonia eutropha H16]
gi|113525590|emb|CAJ91935.1| outer membrane protein or related peptidoglycan-associated
(lipo)protein [Ralstonia eutropha H16]
Length = 217
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 9/114 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ + L + + L VI HTDS G+ K N +S RA+ +
Sbjct: 99 DTLFDFDKAVLKPEGKAKLDDLVSKLQGITLEVIIAVGHTDSFGSDKYNDRLSIRRAESV 158
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--------KVGRQNNQRIEIQIF 183
K+YL+ + + G + + +Q N+R+E+++
Sbjct: 159 KAYLVSK-GVEANRVYTEGKGKRQLKVDPKSCKGNRKSQIACQQPNRRVEVEVV 211
>gi|295690965|ref|YP_003594658.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295432868|gb|ADG12040.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
Length = 386
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 42/157 (26%), Gaps = 1/157 (0%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
+ V G D + V +
Sbjct: 229 TQNAGPAGGSITDVGTFSGRYKDTSVTLGLRYTFGAPPPPPPAAPAYESREFVVYFPFDQ 288
Query: 86 VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L + ++Q A +T I + HTD+ G+ N +S+ RA + +
Sbjct: 289 YVLTPEAQAVVQQAADYAKGGGATKIVVTGHTDTSGSDAYNRRLSERRAKAVAD-GLVGM 347
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++V P V N+R + I
Sbjct: 348 GVNATALAVDWKGESAPAVATGDGVKEPLNRRSTVSI 384
>gi|254474599|ref|ZP_05087985.1| OmpA/MotB [Ruegeria sp. R11]
gi|214028842|gb|EEB69677.1| OmpA/MotB [Ruegeria sp. R11]
Length = 518
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 51/150 (34%), Gaps = 13/150 (8%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYI--------PVHVSFVSEVFLEKKFLPMLQ 97
S++ D + G V + + +Q
Sbjct: 368 SMNAQGDRLANAIAAAGTEVPLEELQRLVNRLAGLQRLTTSFRFEPGSTRPDAQSRSNIQ 427
Query: 98 LIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI---QRGVSSNRFI 152
+A L + + + +D G N I+ +RA+ ++ +I + I
Sbjct: 428 QLARALEAGAYDARELLFVGFSDGDGGAAANQSIAMKRAESVRDAVIAAAETANIDRTEI 487
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+V F P+ +D + GRQ N+R+E+ +
Sbjct: 488 AVEAFGEALPMACDDQRWGRQVNRRVEVWV 517
>gi|192293517|ref|YP_001994122.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
gi|192287266|gb|ACF03647.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
Length = 216
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 56/170 (32%), Gaps = 12/170 (7%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSS-LDKAEDEFQMQLQDTG----IVVSRIGDMIT 73
L + L + + +D + L +++ I
Sbjct: 42 ALTPNKPLTRSLSAAQPAAATGDPTQAKFVDSLRNRPTRSLSSGERTQIAEITKDKPNID 101
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + + ++ ++ + L+ + HTDS+G+ N +S+
Sbjct: 102 LEIT---FEYNSANISRQAAAAVEALGKALSSPDLKGGTFVVAGHTDSVGSDSFNQDLSE 158
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RAD IK L+++ + + G+ D G N+R+++
Sbjct: 159 RRADTIKRVLVEKYGIAGADLVTVGYGESRLKDPAHPDSG--INRRVQVV 206
>gi|91777208|ref|YP_552416.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
LB400]
gi|91689868|gb|ABE33066.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 359
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 11/129 (8%)
Query: 64 VVSRIGDMITCYIPVHVSFV--SEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSI 120
V++ IT F E + L +AT LN P+ + I + D +
Sbjct: 229 SVAKPQQKITLKADSLFRFNGGDEAAMLPAGKRQLDDVATGLNNAPALHELKITGYADRL 288
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-TK-----VGRQN 174
G NL +S +RA ++ YL GVS I+ +G P+ TK
Sbjct: 289 GDKSYNLGLSMQRARTVERYLRAHGVSVP--ITAQGRGSANPLVDCRRTKRDALVKCLAP 346
Query: 175 NQRIEIQIF 183
N+R+EI++
Sbjct: 347 NRRVEIELV 355
>gi|71906104|ref|YP_283691.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71845725|gb|AAZ45221.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 217
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 13/129 (10%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V G+ IT + ++ L L + + VI HTD IG+
Sbjct: 89 VKPSGEKITVAA-DALFDFNKAVLRPAGKAKLDELVSKAKAIKLEVILAVGHTDRIGSDS 147
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN---------- 174
N +S++RA +K YL+ + + G K P+ T D G
Sbjct: 148 YNQKLSEKRAAAVKEYLVAK-GIEANRVYTEGKGEKQPV-TGDKCKGNAKTKALIDCLQP 205
Query: 175 NQRIEIQIF 183
++R++I++
Sbjct: 206 DRRVDIEVI 214
>gi|78356759|ref|YP_388208.1| chemotaxis protein PomB [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219164|gb|ABB38513.1| chemotaxis protein PomB [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 253
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 7/125 (5%)
Query: 63 IVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
++ + IP + F + IL + + + ++ HT
Sbjct: 121 AKITTEDAGVVIRIPSYALFAPGSAKPLPDAASKTATVVRILRER-NLDLVVRCHTSDEK 179
Query: 122 TLKNNLLISQE-----RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+ +L S RA + LI+ G + G+A P+ N+T R N
Sbjct: 180 AEEESLYPSNWELSSARAAAVLRLLIKEGDIPPSRMKAVGYADSQPLLPNNTDENRAINS 239
Query: 177 RIEIQ 181
R+E
Sbjct: 240 RMEFY 244
>gi|332559645|ref|ZP_08413967.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
gi|332277357|gb|EGJ22672.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
Length = 512
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNN 126
D ++ LE + L + +L +F + + +D G + N
Sbjct: 392 ADRLSITFR---FEEGTDSLEPQSRESLSELIKLLEIGRFRGQQLMLVGFSDGRGPARAN 448
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
L +S+ERA+ + + L + + V GF P+ + T GR+ N+R+E+ + P
Sbjct: 449 LDLSRERAEAVAAALREAVPELGPPL-VEGFGEALPLACDTTVAGRRMNRRVELWLRP 505
>gi|114762079|ref|ZP_01441547.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601]
gi|114545103|gb|EAU48106.1| OmpA domain protein [Roseovarius sp. HTCC2601]
Length = 517
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
E L+ + +Q +A L ++ + +D+ G + NL I+ ERA+ ++
Sbjct: 410 FEAGETGLDAQSRSNVQQLARALEAGEYDGRELVFVGFSDAQGPAEANLEIAYERAEAVR 469
Query: 139 SYLIQRGVSSN-RFIS--VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++ +++ R + V F P+ +DT GRQ N+R+E+ +
Sbjct: 470 AAVLNAAEAADLRRLELGVEAFGEAMPMACDDTVWGRQVNRRVEVWL 516
>gi|61655681|gb|AAX49327.1| PlpD [Mannheimia haemolytica]
gi|61655685|gb|AAX49329.1| PlpD [Mannheimia glucosida]
Length = 217
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G+ + + L K ++ +A L + + + +TD +G+ NL
Sbjct: 108 NGNSSFTLTGDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRLGSAAYNL 167
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+SQ R++ +K+ L+Q+GV++ I G+ + D + G+
Sbjct: 168 DLSQRRSNTVKARLVQQGVTAQ--IEAVGYGKANQVKACDGETGQAL 212
>gi|15600146|ref|NP_253640.1| flagellar motor protein MotB [Pseudomonas aeruginosa PAO1]
gi|107104052|ref|ZP_01367970.1| hypothetical protein PaerPA_01005125 [Pseudomonas aeruginosa PACS2]
gi|116053102|ref|YP_793421.1| flagellar motor protein MotB [Pseudomonas aeruginosa UCBPP-PA14]
gi|218894048|ref|YP_002442917.1| flagellar motor protein MotB [Pseudomonas aeruginosa LESB58]
gi|254238332|ref|ZP_04931655.1| chemotaxis protein MotB [Pseudomonas aeruginosa C3719]
gi|254244159|ref|ZP_04937481.1| chemotaxis protein MotB [Pseudomonas aeruginosa 2192]
gi|313109955|ref|ZP_07795882.1| chemotaxis protein MotB [Pseudomonas aeruginosa 39016]
gi|9951234|gb|AAG08338.1|AE004908_4 chemotaxis protein MotB [Pseudomonas aeruginosa PAO1]
gi|115588323|gb|ABJ14338.1| chemotaxis protein MotB [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170263|gb|EAZ55774.1| chemotaxis protein MotB [Pseudomonas aeruginosa C3719]
gi|126197537|gb|EAZ61600.1| chemotaxis protein MotB [Pseudomonas aeruginosa 2192]
gi|218774276|emb|CAW30093.1| chemotaxis protein MotB [Pseudomonas aeruginosa LESB58]
gi|310882384|gb|EFQ40978.1| chemotaxis protein MotB [Pseudomonas aeruginosa 39016]
Length = 347
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 9/142 (6%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ ++R G I + + + L+ F +L +A + + P+ I
Sbjct: 146 LKDFKDQIHFEITRDGLRIQIVDAANRPMFDLGSARLQPYFEDILLAMAETIRQVPN-KI 204
Query: 112 AIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+I HTD+ N +S RA+ + L+ G + V G+A D D
Sbjct: 205 SISGHTDAKPYAGNGDFGNWELSANRANAARRALVAGGYPEGQIAQVVGYASARLFDDKD 264
Query: 168 TKVGRQNNQRIEIQIFPRGNIK 189
N+RI+I + R K
Sbjct: 265 PL--NPVNRRIDIVVLTRKAQK 284
>gi|251733465|emb|CAR82482.1| pal [Agrobacterium rubi]
Length = 87
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ LQ A L ++P+ I ++ H D GT + NL + RA K +L
Sbjct: 2 DSTSIRADAQQTLQRQAQWLARYPNYAITVEGHADERGTREYNLALGARRAAATKEFLAS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
+GV +NR ++ + + P+ D
Sbjct: 62 QGVPANRMKTIS-YGKERPVAVCDD 85
>gi|262038728|ref|ZP_06012088.1| OmpA/MotB domain-containing protein [Leptotrichia goodfellowii
F0264]
gi|261747280|gb|EEY34759.1| OmpA/MotB domain-containing protein [Leptotrichia goodfellowii
F0264]
Length = 362
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 89 EKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
+ + L IA ++N+F I HTDS G+ N +S RA + L + G+
Sbjct: 255 QAEAKD-LGTIANVINQFADGGTIDFVGHTDSTGSNAYNQKLSVARAQNVARLLREYGLK 313
Query: 148 SNRFI-SVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
++ ++ G P DTN+T GR NN+R+E+
Sbjct: 314 NSISYGTITGKGESQPADTNNTVQGRYNNRRVEL 347
>gi|288942645|ref|YP_003444885.1| hypothetical protein Alvin_2951 [Allochromatium vinosum DSM 180]
gi|288898017|gb|ADC63853.1| conserved hypothetical protein [Allochromatium vinosum DSM 180]
Length = 243
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/197 (12%), Positives = 63/197 (31%), Gaps = 19/197 (9%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
++ +M + L + +++ ++ + + E EF+ L +
Sbjct: 30 LMATLMMIFLFLAVLHMVQVERLHQVETEVRVTAAESRQAIYTALEREFRDDLPRWNAEL 89
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ----LIATILNKFPST--VIAIQSHTDS 119
+ P + + ++ +F +L L F I ++ HT S
Sbjct: 90 VERTLTLRFREPDILFDRNSARIKPEFEAILSDFLPRYVARLEPFRDVIREIRLEGHTSS 149
Query: 120 IGT--------LKNNLLISQERADVIKSYL----IQRGVSSNR-FISVRGFAYKYPIDTN 166
N+ +SQ+R + + +G R ++ G + P+
Sbjct: 150 EWNAGTAPLDAYFLNMELSQQRIQAVLRFAYGLDRLKGEDWFRGRVAAVGLSSSRPVQDA 209
Query: 167 DTKVGRQNNQRIEIQIF 183
+ ++R+E +
Sbjct: 210 QGRENPTASRRVEFSVL 226
>gi|319782061|ref|YP_004141537.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167949|gb|ADV11487.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 743
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + + L+ +A +L K P+ I+ HTD++GT + NL
Sbjct: 620 RVDLDTLNFEFGSASISDTEVQKLEGVATAMEKLLKKNPAETFLIEGHTDAVGTPEANLA 679
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S RA+ + L ++ +G+ +Y +T + N+R+ I+
Sbjct: 680 LSDRRAEAVAEALTNAFGIPPENLTTQGYGEEYLKV--NTAAPNRENRRVAIR 730
>gi|218462138|ref|ZP_03502229.1| hypothetical conserved membrane protein [Rhizobium etli Kim 5]
Length = 386
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTV--IAIQSHTDSIGTLK-----NNLLISQERADVIKS 139
L K F P++ IA +L + + I I HTD++ NN +S+ RA I S
Sbjct: 244 ELTKSFEPLVASIAAVLKQNAELIGGITITGHTDNVPLQASNPLSNNQRLSEARAATIAS 303
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
L GV + + S +G A P+ ND++ GR N+RIE
Sbjct: 304 LLAASGVPTGQLKS-QGRAATQPLAGNDSREGRAANRRIE 342
>gi|330993342|ref|ZP_08317277.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
gi|329759372|gb|EGG75881.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
Length = 364
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 7/110 (6%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH------TDSIGTLKNNLLISQE 132
L + ++ A +T I + + + NL +S
Sbjct: 255 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTAAHPGPRGQQYNLGLSMR 314
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ +K+ LI R I + G+ +P+ N+R+EI +
Sbjct: 315 RAESVKAELI-RDGVPANAIDIHGYGEAHPLVPTGPDTREPQNRRVEIIL 363
>gi|39933290|ref|NP_945566.1| OmpA family protein [Rhodopseudomonas palustris CGA009]
gi|39652915|emb|CAE25657.1| possible OmpA family member [Rhodopseudomonas palustris CGA009]
Length = 689
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + LQ IA LN+ P V I+ HTD++G +NL +
Sbjct: 556 IDLNTINFDLGSWDIPPDQAAKLQAIADGLNRAIQRNPREVFLIEGHTDAVGNDTDNLSL 615
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA+ + L Q+ ++ +G+ +Y T+ + N+R+ I +I P
Sbjct: 616 SDRRAEAAAALLTQQFGVPAENLTSQGYGEQYLKI--QTQAPERQNRRVTIRRITP 669
>gi|167913946|ref|ZP_02501037.1| hypothetical protein Bpse112_25907 [Burkholderia pseudomallei 112]
Length = 483
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 4 ELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ ++ G + + + + + R + + L +
Sbjct: 228 RAAAVALGVLVLAYGAISFWLDSQGRPIRNALAAWMPPTRTINIAETLPPPLPQILTEGW 287
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + +F + + F+ ++ + +P + + HTDS
Sbjct: 288 LTAYKHPQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPG-DLEVIGHTDSRP 346
Query: 122 TLK----NNLLISQERADVIKSYLIQR---------GVSSNRFISVRGFAYKYPIDTNDT 168
+N +S+ RA + L + + R I G PIDT T
Sbjct: 347 IRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKT 406
Query: 169 KVGRQNNQRIEI--QIFPRG 186
+ N+R+++ ++ P G
Sbjct: 407 AAAYERNRRVDVLWKVIPDG 426
>gi|167897282|ref|ZP_02484684.1| hypothetical protein Bpse7_26327 [Burkholderia pseudomallei 7894]
Length = 481
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 4 ELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ ++ G + + + + + R + + L +
Sbjct: 226 RAAAVALGVLVLAYGAISFWLDSQGRPIRNALAAWMPPTRTINIAETLPPPLPQILTEGW 285
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + +F + + F+ ++ + +P + + HTDS
Sbjct: 286 LTAYKHPQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPG-DLEVIGHTDSRP 344
Query: 122 TLK----NNLLISQERADVIKSYLIQR---------GVSSNRFISVRGFAYKYPIDTNDT 168
+N +S+ RA + L + + R I G PIDT T
Sbjct: 345 IRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKT 404
Query: 169 KVGRQNNQRIEI--QIFPRG 186
+ N+R+++ ++ P G
Sbjct: 405 AAAYERNRRVDVLWKVIPDG 424
>gi|167848689|ref|ZP_02474197.1| hypothetical protein BpseB_25726 [Burkholderia pseudomallei B7210]
Length = 486
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 4 ELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ ++ G + + + + + R + + L +
Sbjct: 231 RAAAVALGVLVLAYGAISFWLDSQGRPIRNALAAWMPPTRTINIAETLPPPLPQILTEGW 290
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + +F + + F+ ++ + +P + + HTDS
Sbjct: 291 LTAYKHPQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPG-DLEVIGHTDSRP 349
Query: 122 TLK----NNLLISQERADVIKSYLIQR---------GVSSNRFISVRGFAYKYPIDTNDT 168
+N +S+ RA + L + + R I G PIDT T
Sbjct: 350 IRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKT 409
Query: 169 KVGRQNNQRIEI--QIFPRG 186
+ N+R+++ ++ P G
Sbjct: 410 AAAYERNRRVDVLWKVIPDG 429
>gi|167827195|ref|ZP_02458666.1| hypothetical protein Bpseu9_26190 [Burkholderia pseudomallei 9]
Length = 489
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 4 ELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ ++ G + + + + + R + + L +
Sbjct: 234 RAAAVALGVLVLAYGAISFWLDSQGRPIRNALAAWMPPTRTINIAETLPPPLPQILTEGW 293
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + +F + + F+ ++ + +P + + HTDS
Sbjct: 294 LTAYKHPQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPG-DLEVIGHTDSRP 352
Query: 122 TLK----NNLLISQERADVIKSYLIQR---------GVSSNRFISVRGFAYKYPIDTNDT 168
+N +S+ RA + L + + R I G PIDT T
Sbjct: 353 IRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKT 412
Query: 169 KVGRQNNQRIEI--QIFPRG 186
+ N+R+++ ++ P G
Sbjct: 413 AAAYERNRRVDVLWKVIPDG 432
>gi|167818821|ref|ZP_02450501.1| hypothetical protein Bpse9_27048 [Burkholderia pseudomallei 91]
Length = 490
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 4 ELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ ++ G + + + + + R + + L +
Sbjct: 235 RAAAVALGVLVLAYGAISFWLDSQGRPIRNALAAWMPPTRTINIAETLPPPLPQILTEGW 294
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + +F + + F+ ++ + +P + + HTDS
Sbjct: 295 LTAYKHPQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPG-DLEVIGHTDSRP 353
Query: 122 TLK----NNLLISQERADVIKSYLIQR---------GVSSNRFISVRGFAYKYPIDTNDT 168
+N +S+ RA + L + + R I G PIDT T
Sbjct: 354 IRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKT 413
Query: 169 KVGRQNNQRIEI--QIFPRG 186
+ N+R+++ ++ P G
Sbjct: 414 AAAYERNRRVDVLWKVIPDG 433
>gi|167722659|ref|ZP_02405895.1| hypothetical protein BpseD_26829 [Burkholderia pseudomallei DM98]
Length = 480
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 4 ELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ ++ G + + + + + R + + L +
Sbjct: 225 RAAAVALGVLVLAYGAISFWLDSQGRPIRNALAAWMPPTRTINIAETLPPPLPQILTEGW 284
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + +F + + F+ ++ + +P + + HTDS
Sbjct: 285 LTAYKHPQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPG-DLEVIGHTDSRP 343
Query: 122 TLK----NNLLISQERADVIKSYLIQR---------GVSSNRFISVRGFAYKYPIDTNDT 168
+N +S+ RA + L + + R I G PIDT T
Sbjct: 344 IRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKT 403
Query: 169 KVGRQNNQRIEI--QIFPRG 186
+ N+R+++ ++ P G
Sbjct: 404 AAAYERNRRVDVLWKVIPDG 423
>gi|148558474|ref|YP_001257134.1| putative lipoprotein [Brucella ovis ATCC 25840]
gi|163844256|ref|YP_001621911.1| hypothetical protein BSUIS_B0062 [Brucella suis ATCC 23445]
gi|254699373|ref|ZP_05161201.1| hypothetical protein Bsuib55_00717 [Brucella suis bv. 5 str. 513]
gi|254706382|ref|ZP_05168210.1| hypothetical protein BpinM_05165 [Brucella pinnipedialis
M163/99/10]
gi|254711327|ref|ZP_05173138.1| hypothetical protein BpinB_13940 [Brucella pinnipedialis B2/94]
gi|254711926|ref|ZP_05173737.1| hypothetical protein BcetM6_00730 [Brucella ceti M644/93/1]
gi|254714996|ref|ZP_05176807.1| hypothetical protein BcetM_00740 [Brucella ceti M13/05/1]
gi|256014854|ref|YP_003104863.1| lipoprotein, putative [Brucella microti CCM 4915]
gi|256030043|ref|ZP_05443657.1| hypothetical protein BpinM2_05215 [Brucella pinnipedialis
M292/94/1]
gi|256059695|ref|ZP_05449890.1| hypothetical protein Bneo5_05015 [Brucella neotomae 5K33]
gi|256158216|ref|ZP_05456125.1| hypothetical protein BcetM4_05150 [Brucella ceti M490/95/1]
gi|256252843|ref|ZP_05458379.1| hypothetical protein BcetB_00720 [Brucella ceti B1/94]
gi|260166906|ref|ZP_05753717.1| lipoprotein, putative [Brucella sp. F5/99]
gi|261216699|ref|ZP_05930980.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261219930|ref|ZP_05934211.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261313828|ref|ZP_05953025.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261318931|ref|ZP_05958128.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261319567|ref|ZP_05958764.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261323667|ref|ZP_05962864.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261749823|ref|ZP_05993532.1| TraQ protein [Brucella suis bv. 5 str. 513]
gi|261756291|ref|ZP_06000000.1| outer membrane protein OprF [Brucella sp. F5/99]
gi|265987066|ref|ZP_06099623.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265996727|ref|ZP_06109284.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|148369759|gb|ABQ62631.1| putative lipoprotein [Brucella ovis ATCC 25840]
gi|163674979|gb|ABY39089.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|255997514|gb|ACU49201.1| lipoprotein, putative [Brucella microti CCM 4915]
gi|260918514|gb|EEX85167.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260921788|gb|EEX88356.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292257|gb|EEX95753.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261298154|gb|EEY01651.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261299647|gb|EEY03144.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261302854|gb|EEY06351.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261736275|gb|EEY24271.1| outer membrane protein OprF [Brucella sp. F5/99]
gi|261739576|gb|EEY27502.1| TraQ protein [Brucella suis bv. 5 str. 513]
gi|262551024|gb|EEZ07185.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264659263|gb|EEZ29524.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 172
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 64/186 (34%), Gaps = 19/186 (10%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + +++ C + H+ + L E Q
Sbjct: 2 RTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQ-EELRLQVFPQEPTAQATMWPA 60
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + V V + + + L + + K I ++ TD+
Sbjct: 61 RPPKQTVSVYFPQDVTVFRPTSAQINQ-----LHTLLWPVPKH----INVRGLTDNNCPP 111
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFIS----VRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ +++ RA I ++LI +GV ++R V+ +A P+ GR N+R++
Sbjct: 112 PGDTQVARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPLSP-----GRVLNRRVD 166
Query: 180 IQIFPR 185
I+I +
Sbjct: 167 IEILRK 172
>gi|114777571|ref|ZP_01452552.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
gi|114552042|gb|EAU54559.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
Length = 258
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 19/186 (10%)
Query: 9 MFIMTTISGCGL-----ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + +++G A+ ++ K + + + + D + Q I
Sbjct: 48 LAAIGSLAGTFSPMPRGANLDEGKGPALPTRSIVDGSTAPKRTAKELTDIAKELGQGDAI 107
Query: 64 VVSRIGDM-ITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + + P H++F V L K ++ +A I K T I I+ HTD+
Sbjct: 108 EIMPLDKSSLRIRFPEHIAFAAGHVDLSPKARTLIDKLAIIFQKPEVTEIQIEGHTDATP 167
Query: 122 ----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-QNNQ 176
+N +S RA + L ++GV R I+ G ++PI G + ++
Sbjct: 168 TKNSDYPSNWELSAARAMAVFHELAEQGVPRGRMIAA-GMGDQHPI------KGHPELSR 220
Query: 177 RIEIQI 182
R++I +
Sbjct: 221 RVDITL 226
>gi|126738442|ref|ZP_01754147.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
gi|126720241|gb|EBA16947.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
Length = 518
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 51/150 (34%), Gaps = 13/150 (8%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--------SFVSEVFLEKKFLPMLQ 97
S++ D + +G + ++ + + ++
Sbjct: 368 SMNAQGDRLSNAILASGKDLGVDELQRMVRQLANLQRLTTSFRFETGSARPDAQSRSNIE 427
Query: 98 LIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR---FI 152
+A L + + +D G N I+ +RA ++ ++ + I
Sbjct: 428 QLARALETGLYDGRKLVFAGFSDGDGAAAANRKIALKRATAVRDAVLAAAEPESAARVVI 487
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V F P+ +++ GRQ N+R+E+ +
Sbjct: 488 EVEAFGEALPMACDNSAWGRQVNRRVEVWV 517
>gi|61655677|gb|AAX49325.1| PlpD [Mannheimia haemolytica]
Length = 217
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L K ++ +A L + + + +TD +G+ NL +SQ R++ +
Sbjct: 118 DFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRLGSAAYNLDLSQRRSNTV 177
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
K+ L+Q+GV++ I G+ + D + G+
Sbjct: 178 KARLVQQGVTAQ--IEAVGYGKANQVKACDGETGQAL 212
>gi|39937736|ref|NP_950012.1| outer membrane protein OprF [Rhodopseudomonas palustris CGA009]
gi|39651596|emb|CAE30118.1| possible outer membrane protein OprF (AF117972) [Rhodopseudomonas
palustris CGA009]
Length = 216
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 57/170 (33%), Gaps = 12/170 (7%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSS-LDKAEDEFQMQLQDTG----IVVSRIGDMIT 73
L + L + + +D + L +++ I
Sbjct: 42 ALTPNKPLTRSLSAAQPAAATVDPTQAKFVDSLRNRPTRSLSSGERTQIAEITKDKPNID 101
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + + ++ P ++ + L+ + HTDS+G+ N +S+
Sbjct: 102 LEIT---FEYNSANISRQAAPAVEALGKALSSPDLKGGTFVVAGHTDSVGSDSFNQDLSE 158
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RAD IK L+++ + + G+ D G N+R+++
Sbjct: 159 RRADTIKRVLVEKYGIAGADLVTVGYGESRLKDPAHPDSG--INRRVQVV 206
>gi|260598378|ref|YP_003210949.1| flagellar motor protein MotB [Cronobacter turicensis z3032]
gi|260217555|emb|CBA31774.1| Chemotaxis protein motB [Cronobacter turicensis z3032]
Length = 310
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 56/146 (38%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A+ + + I + + G I + +E +L+ IA +LN
Sbjct: 129 EADPKLRALRPHLRIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGI 188
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ +++ HTD +N +S +RA+ + L+ G+ + + V G A
Sbjct: 189 PN-KVSLSGHTDDFPYANGERGYSNWELSADRANSSRRELVIGGLDDGKVLRVVGMAATM 247
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N+RI + + + +
Sbjct: 248 RLAEKG--ANEALNRRISLLVLNKQS 271
>gi|309781036|ref|ZP_07675774.1| outer membrane protein A [Ralstonia sp. 5_7_47FAA]
gi|308920102|gb|EFP65761.1| outer membrane protein A [Ralstonia sp. 5_7_47FAA]
Length = 218
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 9/114 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ + L + + LN V+ HTDS G+ K N +S RA+ +
Sbjct: 100 DTLFDFDKAVLKPEGKAKLDDLISKLNGINLEVVIAVGHTDSFGSDKYNDRLSVRRAEAV 159
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--------KVGRQNNQRIEIQIF 183
K YL+ + + G + + +Q N+R+++++
Sbjct: 160 KGYLVSK-GIEANRVYTEGKGKRQLKVDPKSCKGARKAQIACQQPNRRVDVEVV 212
>gi|312958642|ref|ZP_07773162.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
gi|311287185|gb|EFQ65746.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
Length = 339
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 57/169 (33%), Gaps = 11/169 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH----V 80
+ + + + + +K E+ QM I + + I +
Sbjct: 107 DTVETMAEQVEQERLELLLQELQNKVEENPQMMKFKDQISFEITPEGLRIQITDAANRPM 166
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADV 136
L+ F +L +A + P+ I+I HTD+ N +S RA+
Sbjct: 167 FDSGSARLKPYFEDILLAMADTIKTVPN-KISISGHTDAKPYAGQGDFGNWELSANRANA 225
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L+ + V GFA + + N+RI+I + +
Sbjct: 226 ARRALVAGSYPDPQVARVVGFASSQ-LFDHKDPFNPA-NRRIDIVVLTK 272
>gi|260891273|ref|ZP_05902536.1| OmpA family protein [Leptotrichia hofstadii F0254]
gi|260858949|gb|EEX73449.1| OmpA family protein [Leptotrichia hofstadii F0254]
Length = 367
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 96 LQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI-S 153
L+ IA ++N+F I HTDS G+ N +S RA + L + G+ + +
Sbjct: 266 LRTIAGVINQFADGGSIDFVGHTDSTGSAAYNQKLSVARAQNVAKLLREYGLKNTISYGT 325
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ G P DTNDT GR NN+R+E+
Sbjct: 326 ITGQGESNPADTNDTVEGRYNNRRVEL 352
>gi|298565977|dbj|BAJ09608.1| hypothetical protein [Pasteurella pneumotropica]
Length = 289
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 13/116 (11%)
Query: 78 VHVSFVSEV---FLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQER 133
+ ++ + ++ A + + PS I + HTD IG+ N +SQ+R
Sbjct: 173 SALFGFNKSGYNDILPNGKEKIREFADKVKEMPSISKILVSGHTDPIGSTAYNQTLSQKR 232
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDT------KVGRQNNQRIEIQI 182
A+ +K L + GVS+ I G+ P+ T DT Q N+R+EI +
Sbjct: 233 ANTVKLALQKAGVSTP--IEAVGYGKAEPVVTTCDTYKDAQRNQCNQPNRRVEIAV 286
>gi|192288642|ref|YP_001989247.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
gi|192282391|gb|ACE98771.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
Length = 306
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + LQ IA LN+ P V I+ HTD++G +NL +
Sbjct: 173 IDLNTINFDLGSWDIPPDQAAKLQAIADGLNRAIQRNPREVFLIEGHTDAVGNDTDNLSL 232
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA+ + L Q+ ++ +G+ +Y T+ + N+R+ I +I P
Sbjct: 233 SDRRAEAAAALLTQQFGVPAENLTSQGYGEQYLKI--QTQAPERQNRRVTIRRITP 286
>gi|148359858|ref|YP_001251065.1| hypothetical protein LPC_1786 [Legionella pneumophila str. Corby]
gi|296107908|ref|YP_003619609.1| chemotaxis protein MotB [Legionella pneumophila 2300/99 Alcoy]
gi|148281631|gb|ABQ55719.1| hypothetical protein LPC_1786 [Legionella pneumophila str. Corby]
gi|295649810|gb|ADG25657.1| chemotaxis protein MotB [Legionella pneumophila 2300/99 Alcoy]
Length = 312
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 71/179 (39%), Gaps = 12/179 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+E + ++ + + S++K + + + V G I
Sbjct: 133 AKDKEIVESQANEIKKLEELKSEINLSMEK-DPSLAGLKKQLLMDVVSDGLRIQLIDNQK 191
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN------NLLISQ 131
+ V + + P+L IA +LN P+ I IQ HTD+ N +S
Sbjct: 192 KPMFDVGSDKINPEIEPILANIAKLLNSVPN-KITIQGHTDANPYHNPEELEYTNWELSA 250
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+RA+ + LI+ G+ N+ ++V G++ +D + N+RI I + +G K
Sbjct: 251 QRANAARRALIKAGMDENKVMTVTGYSSTVLLDKKNPY--NPENRRISIIVMKKGAENK 307
>gi|317151982|ref|YP_004120030.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316942233|gb|ADU61284.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 273
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 45/150 (30%), Gaps = 17/150 (11%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTV 110
+ + D I + I + F + L + +L + +
Sbjct: 89 KALKWENIDDDINFRSNRFVQILSIDASLLFGPDAVTLSESGQAVLDGYMPVFAQV-QYP 147
Query: 111 IAIQSHTDS--------------IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ + HT + IS RA + +LI R + V G
Sbjct: 148 LLLAGHTSQLRDELGADYKPGDDEENPDLSWKISLSRALAVYRHLIDR-GMRPGMLRVEG 206
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
F P T T R N+R++I + R
Sbjct: 207 FGKYMPFYTQTTVESRARNRRVDIVLDKRN 236
>gi|225874275|ref|YP_002755734.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196]
gi|225793995|gb|ACO34085.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196]
Length = 270
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 11/139 (7%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYI----PVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ Q++ + + + + + L ML+L+A L P
Sbjct: 100 AQIQLKALQNHVNMVVTPEGLRIELLEAKGGTFFDSGSSKLSAGGKEMLKLLAQQLGGVP 159
Query: 108 STVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ I I+ +TD+ N +S +RA+ + + G+ + + VRG+ +
Sbjct: 160 N-RITIEGYTDAKPYPGKDGYTNWDLSADRANAARRLMQASGLHAGQVAEVRGYGDQNLR 218
Query: 164 DTNDTKVGRQNNQRIEIQI 182
N N+RI I +
Sbjct: 219 LPNKPFD--PTNRRITIVV 235
>gi|120556584|ref|YP_960935.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
gi|120326433|gb|ABM20748.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 146
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 4/138 (2%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
LD + + L G D + ++ L+ + ML+ A +
Sbjct: 6 LDNPDMLAKAALAFAGTNGQLAADADRPHRTRFHYGFNKHTLDAPDIDMLKRHAAYIKGH 65
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
P + I H D+ G+ + N +++ RA+ + LIQ GVS + + P+
Sbjct: 66 PGMQVRIHGHADNFGSAEYNRFLARLRANAVARLLIQEGVSQSSILLATW-GSDRPLTR- 123
Query: 167 DTKVGRQNNQRIEIQIFP 184
N+R+E++
Sbjct: 124 --PEDHAANRRVELEYLS 139
>gi|197285528|ref|YP_002151400.1| motility protein B [Proteus mirabilis HI4320]
gi|227356023|ref|ZP_03840414.1| flagellar motor protein MotB [Proteus mirabilis ATCC 29906]
gi|194683015|emb|CAR43481.1| chemotaxis protein (motility protein B) [Proteus mirabilis HI4320]
gi|227163800|gb|EEI48708.1| flagellar motor protein MotB [Proteus mirabilis ATCC 29906]
Length = 349
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 55/148 (37%), Gaps = 10/148 (6%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + I + G I + V +E +L IA ILN P
Sbjct: 125 QDPRLKDLKPHLLIDMMDEGLRIQIIDKESRPMFKVGSATVEPYMKDILTAIAPILNDSP 184
Query: 108 STVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
I++ HTD I +N +S +RA+ + LI G++ + + V G A
Sbjct: 185 -YKISLSGHTDDIPYASGALKYSNWELSTDRANASRRELIGAGLAEWKVLRVVGMASTVH 243
Query: 163 IDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ D N+RI I + + KK
Sbjct: 244 LVKEDGFA--PANRRISILVLTKQEEKK 269
>gi|157962338|ref|YP_001502372.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157847338|gb|ABV87837.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 249
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 52/142 (36%), Gaps = 2/142 (1%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
L ++ Q QL + + + + V +E F L IA ++
Sbjct: 101 ELSDQYEQAQQQLTTLKMAQEQKLTELALGLNVQ-FKTGSSVIEPHFQQQLNDIAYAMSL 159
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
P + + + D G N +S++R +K+YL ++ + + F P+
Sbjct: 160 SPELTLDLTGYADRRGDSDYNQALSEQRVAEVKNYLTEQ-GVEEERLHNQAFGDSSPLMA 218
Query: 166 NDTKVGRQNNQRIEIQIFPRGN 187
++R+ +++ + +
Sbjct: 219 EQNFENDFFDRRVTLKLQNQNS 240
>gi|298208247|ref|YP_003716426.1| OmpA/MotB [Croceibacter atlanticus HTCC2559]
gi|83848168|gb|EAP86038.1| OmpA/MotB [Croceibacter atlanticus HTCC2559]
Length = 424
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 62/166 (37%), Gaps = 7/166 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV--- 78
+ + + + ++ D+ E + TG + GD + +
Sbjct: 260 QDNRTESGVAVNTRGQAIDLNKNGIPDEMESALDARYLKTGSETTVNGDDVIAELIDKGY 319
Query: 79 -HVSFVSEVFLEKKF-LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+V F + L + + +N + + D IG N +S++RA
Sbjct: 320 VNVYFKFNSEEPSVYSLEAINYLVKYMNANTDANATLVGYADEIGNEAYNQKLSEQRAQK 379
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I L+ GVS++R ++V+G + +K RQ +R+ ++
Sbjct: 380 INDILVASGVSASR-LTVKGGGEDNSV-DKSSKYARQLMRRVTFKL 423
>gi|296391793|ref|ZP_06881268.1| flagellar motor protein MotB [Pseudomonas aeruginosa PAb1]
Length = 347
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 9/142 (6%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ ++R G I + + + L+ F +L +A + + P+ I
Sbjct: 146 LKDFKDQIHFEITRDGLRIQIVDAANRPMFDLGSARLQPYFEDILLAMAETIRQVPN-KI 204
Query: 112 AIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+I HTD+ N +S RA+ + L+ G + V G+A D D
Sbjct: 205 SISGHTDAKPYAGNGDFGNWELSANRANAARRALVAGGYPEGQIAQVVGYASARLFDDKD 264
Query: 168 TKVGRQNNQRIEIQIFPRGNIK 189
N+RI+I + R K
Sbjct: 265 PL--NPVNRRIDIVVLTRKAQK 284
>gi|167949297|ref|ZP_02536371.1| hypothetical protein Epers_23486 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 117
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ RG+ +P+ N T GR N+R+E+
Sbjct: 16 QDRLLARGYGEDHPVADNGTSEGRAKNRRVELI 48
>gi|167741629|ref|ZP_02414403.1| hypothetical protein Bpse14_26418 [Burkholderia pseudomallei 14]
Length = 472
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 4 ELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ ++ G + + + + + R + + L +
Sbjct: 217 RAAAVALGVLVLAYGAISFWLDSQGRPIRNALAAWMPPTRTINIAETLPPPLPQILTEGW 276
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + +F + + F+ ++ + +P + + HTDS
Sbjct: 277 LTAYKHPQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPG-DLEVIGHTDSRP 335
Query: 122 TLK----NNLLISQERADVIKSYLIQR---------GVSSNRFISVRGFAYKYPIDTNDT 168
+N +S+ RA + L + + R I G PIDT T
Sbjct: 336 IRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKT 395
Query: 169 KVGRQNNQRIEI--QIFPRG 186
+ N+R+++ ++ P G
Sbjct: 396 AAAYERNRRVDVLWKVIPDG 415
>gi|110678461|ref|YP_681468.1| OmpA family domain-containing protein [Roseobacter denitrificans
OCh 114]
gi|109454577|gb|ABG30782.1| OmpA family domain protein [Roseobacter denitrificans OCh 114]
Length = 221
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI-QSHTDSIGTLKNNLLISQER 133
I L+ + + IA L + PS + TD++G + N + R
Sbjct: 21 DIGTINFDFDSAELDAEAQAKIVEIAEQLKENPSYKPTVLIGFTDAVGGVGYNDQLGLRR 80
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A+ + + L+++GVS +R +V + + + + N+R+ + +
Sbjct: 81 ANAVSAALLEQGVSVDRIGTVSSRGERELLVSVAGPE--RLNRRVTVTL 127
>gi|308049988|ref|YP_003913554.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307632178|gb|ADN76480.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 285
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 32/109 (29%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
V + L ++ + I L P+ + + K E+
Sbjct: 175 IAFSVLHYQQKDGELTRESKRRVDQIIQYLQLDPAVELVLTDTYTDNHRSKATNQAITEQ 234
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + S I + I N T GR N+R+ +++
Sbjct: 235 QANTLRSYLVQSGISEERIIATAHGEQRHIANNRTTRGRDLNRRVVVRV 283
>gi|315497902|ref|YP_004086706.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48]
gi|315415914|gb|ADU12555.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48]
Length = 407
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 35/104 (33%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L ++Q A +T + + H D+ G+ N+ +S+ RA +
Sbjct: 303 VYFEFDQSTLTADAQAIVQQAADYAKAGNATRVVVVGHADTSGSAAYNIRLSERRAKTVA 362
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ S ++V P V N+R I I
Sbjct: 363 D-ALAGLGVSGSILAVDWKGESAPAVATGDGVKEPLNRRSTIDI 405
>gi|226941125|ref|YP_002796199.1| flagellar motor protein MotB [Laribacter hongkongensis HLHK9]
gi|226716052|gb|ACO75190.1| MotB [Laribacter hongkongensis HLHK9]
Length = 293
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 60/149 (40%), Gaps = 13/149 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
L K +++ +++ G+ V + + + L +L + + N
Sbjct: 130 LRKYKNQLLLEMTPEGLKVQIVDEK-----NRPMFDSGSANLLPHTKDILHELGKMFNDV 184
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ +++ HTD+ +N +S +RA+ + L+ G+ + + V G
Sbjct: 185 PN-RLSVSGHTDATPYAGGERGYSNWDLSADRANAARRELLAGGMQDQKILRVVGLGSAN 243
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
P+D + N+RI I + + + ++
Sbjct: 244 PLDKQN--AVNPINRRIAIVVLNKQSEEQ 270
>gi|330448674|ref|ZP_08312322.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492865|dbj|GAA06819.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 180
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L + L +L + PS +A+ TD G+ + N +S RA V+ Y
Sbjct: 50 FGFDKSELTPAEMSRLANAVNVLQQNPSFKVAVVGSTDPEGSEEYNDALSMRRAQVVGDY 109
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L + S+ +++ G + D++ + N+R ++ +
Sbjct: 110 LQSQ-GISSSRMTLIGTGERELFIHTDSRSDNRANRRTQLILL 151
>gi|154244938|ref|YP_001415896.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus
Py2]
gi|154159023|gb|ABS66239.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2]
Length = 296
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/231 (15%), Positives = 70/231 (30%), Gaps = 50/231 (21%)
Query: 1 MIKELGLSMFIMTTISGC---GLASREKKK-----------VFLHKSNDTDIVNKRFGSS 46
M+ + IM + ++ + + I
Sbjct: 25 MMVGVLFIFIIMLMVFALDFRSKTDVQEDAIEVAREVARKLDAMSGQVRSAIATVDASQQ 84
Query: 47 LDKAE-DEFQMQLQDTGIVVSRIGDMITCYIPVHV--SFVSEVFLEKKFLPMLQLIATIL 103
+ + + + QL+ G+ V + S L + + IA +L
Sbjct: 85 VRRQLLQDIESQLRAEGLNVQIDEQNGVLRLTEDAVRFEPSRSDLAGRARSNVDKIARVL 144
Query: 104 NK--------------------FPST-----VIAIQSHTDSIGTLKNNLLISQERADVIK 138
++ P + I+ HTDS G N +S ERA
Sbjct: 145 DRVLPAYTACHVAEGAAGGTACQPGAGPSLETVFIEGHTDSTGEDGTNWQLSTERAVNTY 204
Query: 139 SYLIQ--------RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ R + +SV G+A PID +++ N+RI+++
Sbjct: 205 RAIVAGAPRLRGLRNLRGEEILSVSGYASTRPIDPTESREAWARNRRIDLR 255
>gi|222824332|ref|YP_002575906.1| flagellar motor component MotB [Campylobacter lari RM2100]
gi|222539553|gb|ACM64654.1| flagellar motor component MotB [Campylobacter lari RM2100]
Length = 244
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 54/167 (32%), Gaps = 6/167 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
EK+ +K + N L K Q ++ + + + I +P
Sbjct: 60 ASNPLEKESEVHNKYSAPSNANVEELEKLKKLSITQQENIEKLKAALDQRENNIVLNLPA 119
Query: 79 HV-SFVSEVFLEK-KFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNNLLISQERAD 135
V + V + L+ I+ +L + P I ++ +TD+ +
Sbjct: 120 RVEFARASVEINSADVQDFLKRISEVLKRMPKQAQIELRGYTDASDKDPKRNFDLASKRA 179
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + + + V F YP+ N N R+E I
Sbjct: 180 QVVADYLIARGINPAQLIVVSFGENYPLSANKEDE---INNRVEFYI 223
>gi|53725459|ref|YP_102587.1| ompA family protein [Burkholderia mallei ATCC 23344]
gi|52428882|gb|AAU49475.1| ompA family protein [Burkholderia mallei ATCC 23344]
Length = 223
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 9/120 (7%)
Query: 70 DMITCYIPVHVSFV--SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ I +F + ++ L +A L + ++I +TD +G+ N
Sbjct: 98 EPIRLNADAMFAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRLGSDAYNR 157
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEIQ 181
+SQ RA + YLI + G P+ D + N+R+E+
Sbjct: 158 QLSQARAKTVGDYLIAA-GVPADSVHAEGRGASDPLVQCDQRERAALIACLSPNRRVEVV 216
>gi|304392497|ref|ZP_07374437.1| chemotaxis protein MotB [Ahrensia sp. R2A130]
gi|303295127|gb|EFL89487.1| chemotaxis protein MotB [Ahrensia sp. R2A130]
Length = 364
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 63/170 (37%), Gaps = 13/170 (7%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG-IVVSRIGDMITCYIPVHV-- 80
+ ++ + + L + + + D + V+ D + I
Sbjct: 198 TSEVSADDEAAREETDDAGASDVLKELKAAVAKAVDDGPRLDVTPTPDGLLISITDDFDF 257
Query: 81 -SFVSEVFLEKKFLPML--QLIATILNKFPSTVIAIQSHT---DSIGTLKNNLLISQERA 134
F + + +L +A +L++ P + I HT G ++N +S RA
Sbjct: 258 AMFETGSSV-PSGRLVLAMDAVAQVLSERPG-KLHIHGHTDARPFRGGERDNWTLSSARA 315
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ L++ G R + + GFA + ++ +N+RIE+ + P
Sbjct: 316 HSARYMLLRGGFGEKRIVEISGFADRRLKLVDEPDA--ASNRRIELLLEP 363
>gi|294676060|ref|YP_003576675.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
1003]
gi|294474880|gb|ADE84268.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
Length = 223
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 16/171 (9%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
+ + ++GC A + N T D A + QD V+
Sbjct: 12 VIVAGALALAGCSGAEVGSQYETGGFGNATMNNTLMMTGQRDFAVSLTRKFAQDVPNTVN 71
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ L+ L A + +FP + HTD +G+ N
Sbjct: 72 --------------FAFNSDRLDGTAQAALAQQANWIKQFPEVKFRVYGHTDLVGSDAYN 117
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ RA + ++L +G+S +R +V + P+ + N+R
Sbjct: 118 KALGLRRARAVVAFLTGQGISRSRLEAVVSYGKTQPLVYDPGP--NAQNRR 166
>gi|162145880|ref|YP_001600338.1| outer membrane protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209543812|ref|YP_002276041.1| OmpA/MotB domain-containing protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161784454|emb|CAP53984.1| Outer membrane protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209531489|gb|ACI51426.1| OmpA/MotB domain protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 380
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 7/110 (6%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH------TDSIGTLKNNLLISQE 132
+ L + ++ A + +T I + + + N+ +S
Sbjct: 271 VFFDWDQAVLTDRARAIVATAAQASTRTQTTRIEVDGYTDNSAAHPGPRGARYNMALSVR 330
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA +++ LI R I V GF +P+ N+R+EI +
Sbjct: 331 RAQAVQAELI-RDGVPGTAIDVHGFGETHPLVATGPNTREPQNRRVEIIL 379
>gi|170021864|ref|YP_001726818.1| hypothetical protein EcolC_3889 [Escherichia coli ATCC 8739]
gi|169756792|gb|ACA79491.1| conserved hypothetical protein [Escherichia coli ATCC 8739]
Length = 235
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 23/204 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
GL M M R +K+ + + + ++LD EF LQD +
Sbjct: 28 GLMMVFMFISIAYMHYVRIEKEKIKEVAVAYENAQLQIYNALD---IEFAKDLQDWDAEI 84
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPS--TVIAIQSHTDS 119
+ + P + + L+ KF +L +L+ + T + I+ HT +
Sbjct: 85 DKQTLEVRFKSPDVLFGLGSTELKPKFKLILDDFFPRYLKVLDNYQEHITEVRIEGHTST 144
Query: 120 IGT--------LKNNLLISQERADVIKSY------LIQRGVSSNRFISVRGFAYKYPIDT 165
T NN+ +SQ R + Y + + G++ +PI
Sbjct: 145 DWTGTTNPDIAYFNNMALSQGRTRAVLQYVYDIKNIATHQQWVKSKFAAVGYSSAHPILD 204
Query: 166 NDTKVGRQNNQRIEIQIFPRGNIK 189
K ++R+ ++ ++
Sbjct: 205 KTGKEDPNRSRRVTFKVVTNAELQ 228
>gi|307726627|ref|YP_003909840.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307587152|gb|ADN60549.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 367
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 90 KKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
L + L + I I +TD +G+ N +S +RA+ +K YL GV++
Sbjct: 247 PAGKAKLDQLIRDLKQVDDVTAIRIAGYTDRLGSDSYNRQLSTKRAETVKRYLQNGGVTT 306
Query: 149 NRFISVRGFAYKYPIDTNDTK------VGRQNNQRIEIQIFPRGNIKK 190
IS RG P+ N+R+E++ R + +K
Sbjct: 307 P--ISARGRGKDNPVVECHDANRQALIDCLAANRRVELEFV-RSDAQK 351
>gi|332291797|ref|YP_004430406.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332169883|gb|AEE19138.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 292
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 60/170 (35%), Gaps = 23/170 (13%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
K + + V + + +D+ ++ + + + + +
Sbjct: 136 KQARKTTPEEVEVAEEITTKIDRYKNYEEDTIAKGD----------RILLKNILFKTNYS 185
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-------LKNNLLISQERADVIKS 139
++ K L+ +A L + P + IQ H + +S+ RA I
Sbjct: 186 YIHGKSYNDLKKLAKYLKEHPEIIFKIQGHVCCVDHGRDGINLKTGKRNLSEARAKFIYD 245
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
YL + + + + +GF ++P+ + ++ R+EI + +K
Sbjct: 246 YLADQ-GVAKKRMRYQGFGSRFPLGGDPSEDK-----RVEIYVTYIKKVK 289
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L K L L L K I+I + D GT N +SQ+RA+ I
Sbjct: 27 ETFFDTDKSALIKTELASLNRFIASLPKDKIEDISIYGYCDDRGTDAYNKRLSQDRANTI 86
Query: 138 KSYLIQRGVSSNRFISVRGFAY---KYPIDTNDTKVGRQNNQRIEIQI 182
K + +GV+ + G +D +++ R+ N+++EI +
Sbjct: 87 KDIFMLQGVADTIIKNSDGKGELLLTR-LDDAGSEIQRKLNRKVEIIV 133
>gi|213420489|ref|ZP_03353555.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 59
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +SQ+RAD + S LI +GV ++R I G PI +N T G+ N+R+EI + P
Sbjct: 1 MRLSQQRADSVASSLITQGVDASR-IRTSGMGPANPIASNSTAEGKAQNRRVEITLSP 57
>gi|121600552|ref|YP_992694.1| ompA family protein [Burkholderia mallei SAVP1]
gi|124384797|ref|YP_001026510.1| ompA family protein [Burkholderia mallei NCTC 10229]
gi|126450730|ref|YP_001080211.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|167002004|ref|ZP_02267794.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|238562245|ref|ZP_00440713.2| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|254177630|ref|ZP_04884285.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|254199515|ref|ZP_04905881.1| OmpA family protein [Burkholderia mallei FMH]
gi|254205830|ref|ZP_04912182.1| OmpA family protein [Burkholderia mallei JHU]
gi|254358770|ref|ZP_04975043.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|121229362|gb|ABM51880.1| ompA family protein [Burkholderia mallei SAVP1]
gi|124292817|gb|ABN02086.1| ompA family protein [Burkholderia mallei NCTC 10229]
gi|126243600|gb|ABO06693.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|147749111|gb|EDK56185.1| OmpA family protein [Burkholderia mallei FMH]
gi|147753273|gb|EDK60338.1| OmpA family protein [Burkholderia mallei JHU]
gi|148027897|gb|EDK85918.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|160698669|gb|EDP88639.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|238522977|gb|EEP86418.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|243062249|gb|EES44435.1| OmpA family protein [Burkholderia mallei PRL-20]
Length = 236
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 9/120 (7%)
Query: 70 DMITCYIPVHVSFV--SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ I +F + ++ L +A L + ++I +TD +G+ N
Sbjct: 111 EPIRLNADAMFAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRLGSDAYNR 170
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEIQ 181
+SQ RA + YLI + G P+ D + N+R+E+
Sbjct: 171 QLSQARAKTVGDYLIAA-GVPADSVHAEGRGASDPLVQCDQRERAALIACLSPNRRVEVV 229
>gi|330993344|ref|ZP_08317279.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
gi|329759374|gb|EGG75883.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
Length = 368
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 7/110 (6%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH------TDSIGTLKNNLLISQE 132
L + ++ A +T I + + + NL +S
Sbjct: 259 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTAAHPGPRGQQYNLGLSMR 318
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD +K+ LI R I + G+ +P+ N+R+EI +
Sbjct: 319 RADSVKAELI-RDGVPANAIDIHGYGEAHPLVPTGPDTREPQNRRVEIIL 367
>gi|156933520|ref|YP_001437436.1| flagellar motor protein MotB [Cronobacter sakazakii ATCC BAA-894]
gi|156531774|gb|ABU76600.1| hypothetical protein ESA_01340 [Cronobacter sakazakii ATCC BAA-894]
Length = 310
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 56/146 (38%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A+ + + I + + G I + +E +L+ IA +LN
Sbjct: 129 EADPKLRALRPHLRIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGI 188
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ +++ HTD +N +S +RA+ + L+ G+ + + V G A
Sbjct: 189 PN-KVSLSGHTDDFPYANGERGYSNWELSADRANASRRELVIGGLDDGKVLRVVGMAATM 247
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N+RI + + + +
Sbjct: 248 RLAEKG--ANEALNRRISLLVLNKQS 271
>gi|94497803|ref|ZP_01304369.1| probable outer membrane protein [Sphingomonas sp. SKA58]
gi|94422692|gb|EAT07727.1| probable outer membrane protein [Sphingomonas sp. SKA58]
Length = 215
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 62/170 (36%), Gaps = 9/170 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
V + +++ V S + AE Q + + I V
Sbjct: 22 ANDPANGTNVAVDDADNAVSVMAGANESANAAEP--QRSILRPEVAEPEEPPKIEPAQAV 79
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L+ L + I ++ H+DS G +N + S +RA++++
Sbjct: 80 IGFGETPMKLDDAARQALDALIATPAMKAGGPITLRGHSDSRGADGDNKVASAKRAELVR 139
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTN------DTKVGRQNNQRIEIQI 182
YL+++ + I++ P+ N D G+ N+R+++ +
Sbjct: 140 DYLVEK-GVAKDRITLIAIGEGRPVAPNVREDGSDDPEGQAKNRRVDVTV 188
>gi|283785634|ref|YP_003365499.1| chemotaxis protein MotB (motility protein B) [Citrobacter rodentium
ICC168]
gi|282949088|emb|CBG88694.1| chemotaxis protein MotB (motility protein B) [Citrobacter rodentium
ICC168]
Length = 309
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 58/148 (39%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 128 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGI 187
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+Q G+ + + V G A
Sbjct: 188 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELVQGGLDDGKVLRVVGMAATM 246
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + N+RI + + R +
Sbjct: 247 RLSDRGPED--AVNRRISLLVLNRQAEQ 272
>gi|251733521|emb|CAR82510.1| pal [Sinorhizobium xinjiangense]
Length = 87
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L K+P+ I ++ H D GT + NL + RA + YL
Sbjct: 2 DSSSIRADAQATLARQAQWLAKYPNYAIIVEGHADERGTREYNLALGARRAAATREYLAG 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
+GV +NR ++ + + P+ D
Sbjct: 62 QGVPANRMRTIS-YGKEKPVAVCDD 85
>gi|261344163|ref|ZP_05971807.1| chemotaxis MotB protein [Providencia rustigianii DSM 4541]
gi|282567758|gb|EFB73293.1| chemotaxis MotB protein [Providencia rustigianii DSM 4541]
Length = 306
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 21/170 (12%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRIGDMITCYIPVH----VSF 82
+I++ +K ++ + + +++ I D + I +
Sbjct: 101 PNNIISGDANYRFEKLKENLEQAILQDPRLNELKPHLLIDMINDGLRIQIVDSANRPMFK 160
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIK 138
V +E +L+ IA +LN P+ I+I HTD + +N +S +RA+ +
Sbjct: 161 VGSAIVEPYMRDILRAIAPLLNDVPN-RISISGHTDDLPYASEAYYSNWELSSDRANASR 219
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ-NNQRIEIQIFPRGN 187
LI G+ + + V G A + D + G N+RI I +
Sbjct: 220 RELIMGGMEEQKILRVVGMASSIHL---DKENGLAPINRRISIIVLNEDE 266
>gi|218709359|ref|YP_002416980.1| hypothetical protein VS_1368 [Vibrio splendidus LGP32]
gi|218322378|emb|CAV18531.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 236
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/205 (13%), Positives = 65/205 (31%), Gaps = 25/205 (12%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ +F+ +++ A E+ K+ + + L++ + G +
Sbjct: 28 LMMVFLFISVALMRDAMVERDKIKDVAETYKQTQQAIYVALLEEFAKDL----DHWGAEI 83
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPST--VIAIQSHTDS 119
R + P + + L +F +L +L K+ I I+ HT S
Sbjct: 84 DRDTLSVNFTAPDVLFANGKANLTDQFQSILDDFFPRYLAVLEKYQPIIQEIKIEGHTSS 143
Query: 120 IGT--------LKNNLLISQERADVIKSYLIQRGVSSNR-------FISVRGFAYKYPID 164
NN+ +SQ R + Y++ N ++ G++
Sbjct: 144 RWNHDSTDYEAYFNNMRLSQSRTRAVLGYVMALEQVKNDYYEWVKGNVAAVGYSSSKLAL 203
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNIK 189
+ ++R+ +I +
Sbjct: 204 DVAGVEDEKRSRRVSFRIITNAEQQ 228
>gi|209168782|gb|ACI42382.1| major outer membrane protein [Aeromonas hydrophila]
Length = 344
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 54/152 (35%), Gaps = 12/152 (7%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--P 107
+++ ++ + + + L+ + + L + + +F
Sbjct: 194 VAPAPAPVVEEAPAPAPQVVEKNFALNSDVLFAFGKDSLKPEGVAALNGLYQQIVEFQPK 253
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI---- 163
+ +TD IG+ N +S+ RA + ++L+ + + ++V G P+
Sbjct: 254 DGNAVVVGYTDRIGSDAYNQKLSEARARTVANFLVSK-GMAASKVAVEGRGEANPVTGTK 312
Query: 164 -----DTNDTKVGRQNNQRIEIQIFPRGNIKK 190
++R+E+++ ++K
Sbjct: 313 CNGVKAKTQLISCLAPDRRVEVRVSGVQEVQK 344
>gi|296284930|ref|ZP_06862928.1| peptidoglycan-associated protein [Citromicrobium bathyomarinum
JL354]
Length = 371
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + +L + + + + +TD GT++ NL ++ R ++
Sbjct: 263 VFFNWDRSDITPEAASVLNNAISAYQNCGNASVMLAGYTDRSGTVQYNLGLAARRNASVR 322
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
Y+ R + IS F P V N+R+EI
Sbjct: 323 QYMTGR-GIPDARISSEAFGEANPRVPTADGVRELQNRRVEIT 364
>gi|124383073|ref|YP_001024835.1| hypothetical protein BMA10229_1027 [Burkholderia mallei NCTC 10229]
gi|124291093|gb|ABN00363.1| OmpA domain protein [Burkholderia mallei NCTC 10229]
Length = 560
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 4 ELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ ++ G + + + + + R + + L +
Sbjct: 305 RAAAVALGVLVLAYGAISFWLDSQGRPIRNALAAWMPPTRTINIAETLPPPLPQILTEGW 364
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + +F + + F+ ++ + +P + + HTDS
Sbjct: 365 LTAYKHPQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPG-DLEVIGHTDSRP 423
Query: 122 TLK----NNLLISQERADVIKSYLIQR---------GVSSNRFISVRGFAYKYPIDTNDT 168
+N +S+ RA + L + + R I G PIDT T
Sbjct: 424 IRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKT 483
Query: 169 KVGRQNNQRIEI--QIFPRG 186
+ N+R+++ ++ P G
Sbjct: 484 AAAYERNRRVDVLWKVIPDG 503
>gi|307944455|ref|ZP_07659795.1| OmpA/MotB [Roseibium sp. TrichSKD4]
gi|307772204|gb|EFO31425.1| OmpA/MotB [Roseibium sp. TrichSKD4]
Length = 284
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 9/168 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV-- 78
A+ + + + + E + + S G I
Sbjct: 107 ANTHETEEAEIERPRQFATAAASLRQAWQEMPEITEISSNIILEESEEGLNIMLVDQDGR 166
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERA 134
+ + + +L +A +L++ P+ + I HT + G +S ERA
Sbjct: 167 SMFREGSKYPYETTRRLLAKMAPVLSQMPN-RVEITGHTTAGGRSVDPAYTGWDLSAERA 225
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+V + L + GV SN+F +V G + P+ ND +N+R+EI +
Sbjct: 226 NVARQILAEYGVPSNQFYAVIGKSDSEPLFPNDPY--LASNRRVEILL 271
>gi|304392317|ref|ZP_07374258.1| OmpA/MotB [Ahrensia sp. R2A130]
gi|303295421|gb|EFL89780.1| OmpA/MotB [Ahrensia sp. R2A130]
Length = 567
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 51/155 (32%), Gaps = 12/155 (7%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT------CYIPVHVSFVSEVFLEK 90
+ + E E + + + + + +
Sbjct: 404 EQDRADSDAYRTAIEAEPVEEAERAYSLREVRDNQRLRAKVRRIDLNAINFNTGSASVTP 463
Query: 91 KFLPMLQLIA----TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ L+ + + P V ++ HTD++G+ +NL +S RA+ + LI+
Sbjct: 464 SQVDKLEELGIALERHIKANPRAVFLMEGHTDAVGSDVSNLTLSDRRAETVARILIENFA 523
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I +G+ T+ +N+R+ ++
Sbjct: 524 VPAENIVTQGYGESDLKV--RTEAANADNRRVTVR 556
>gi|299773233|gb|ADJ38691.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 368
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 15/120 (12%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRI---EIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+ EIQ+
Sbjct: 302 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVNASEIQV 360
>gi|53721567|ref|YP_110552.1| hypothetical protein BPSS0531 [Burkholderia pseudomallei K96243]
gi|126442377|ref|YP_001061803.1| hypothetical protein BURPS668_A0804 [Burkholderia pseudomallei 668]
gi|126457957|ref|YP_001074752.1| hypothetical protein BURPS1106A_A0716 [Burkholderia pseudomallei
1106a]
gi|134283082|ref|ZP_01769784.1| ompA family protein [Burkholderia pseudomallei 305]
gi|167905639|ref|ZP_02492844.1| hypothetical protein BpseN_25596 [Burkholderia pseudomallei NCTC
13177]
gi|167921862|ref|ZP_02508953.1| hypothetical protein BpseBC_25138 [Burkholderia pseudomallei
BCC215]
gi|217424539|ref|ZP_03456037.1| type IV/VI secretion system protein, DotU/OmpA family protein
[Burkholderia pseudomallei 576]
gi|226196513|ref|ZP_03792094.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|242312248|ref|ZP_04811265.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|254185465|ref|ZP_04892053.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|254296659|ref|ZP_04964113.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|52211981|emb|CAH37988.1| OmpA-family membrane protein [Burkholderia pseudomallei K96243]
gi|126221868|gb|ABN85373.1| type IV/VI secretion system protein, DotU/OmpA family protein
[Burkholderia pseudomallei 668]
gi|126231725|gb|ABN95138.1| OmpA family protein [Burkholderia pseudomallei 1106a]
gi|134245730|gb|EBA45822.1| ompA family protein [Burkholderia pseudomallei 305]
gi|157806733|gb|EDO83903.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|184209700|gb|EDU06743.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|217392463|gb|EEC32487.1| type IV/VI secretion system protein, DotU/OmpA family protein
[Burkholderia pseudomallei 576]
gi|225931389|gb|EEH27395.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|242135487|gb|EES21890.1| OmpA family protein [Burkholderia pseudomallei 1106b]
Length = 552
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 4 ELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ ++ G + + + + + R + + L +
Sbjct: 297 RAAAVALGVLVLAYGAISFWLDSQGRPIRNALAAWMPPTRTINIAETLPPPLPQILTEGW 356
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + +F + + F+ ++ + +P + + HTDS
Sbjct: 357 LTAYKHPQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPG-DLEVIGHTDSRP 415
Query: 122 TLK----NNLLISQERADVIKSYLIQR---------GVSSNRFISVRGFAYKYPIDTNDT 168
+N +S+ RA + L + + R I G PIDT T
Sbjct: 416 IRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKT 475
Query: 169 KVGRQNNQRIEI--QIFPRG 186
+ N+R+++ ++ P G
Sbjct: 476 AAAYERNRRVDVLWKVIPDG 495
>gi|54295159|ref|YP_127574.1| flagellar motor protein MotB [Legionella pneumophila str. Lens]
gi|53754991|emb|CAH16479.1| hypothetical protein lpl2239 [Legionella pneumophila str. Lens]
Length = 312
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 71/179 (39%), Gaps = 12/179 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+E + ++ + + S++K + + + V G I
Sbjct: 133 AKDKEIIESQANEIKKLEELKSEINLSMEK-DPSLAGLKKQLLMDVVSDGLRIQLIDNQK 191
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN------NLLISQ 131
+ V + + P+L IA +LN P+ I IQ HTD+ N +S
Sbjct: 192 KPMFDVGSDKINPEIEPILANIAKLLNSVPN-KITIQGHTDANPYHNPEELEYTNWELSA 250
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+RA+ + LI+ G+ N+ ++V G++ +D + N+RI I + +G K
Sbjct: 251 QRANAARRALIKAGMDENKVMTVTGYSSTVLLDKKNPY--NPENRRISIIVMKKGAENK 307
>gi|254355979|ref|ZP_04972256.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|148024962|gb|EDK83131.1| OmpA family protein [Burkholderia mallei 2002721280]
Length = 560
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 4 ELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ ++ G + + + + + R + + L +
Sbjct: 305 RAAAVALGVLVLAYGAISFWLDSQGRPIRNALAAWMPPTRTINIAETLPPPLPQILTEGW 364
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + +F + + F+ ++ + +P + + HTDS
Sbjct: 365 LTAYKHPQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPG-DLEVIGHTDSRP 423
Query: 122 TLK----NNLLISQERADVIKSYLIQR---------GVSSNRFISVRGFAYKYPIDTNDT 168
+N +S+ RA + L + + R I G PIDT T
Sbjct: 424 IRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKT 483
Query: 169 KVGRQNNQRIEI--QIFPRG 186
+ N+R+++ ++ P G
Sbjct: 484 AAAYERNRRVDVLWKVIPDG 503
>gi|189425754|ref|YP_001952931.1| hypothetical protein Glov_2698 [Geobacter lovleyi SZ]
gi|189422013|gb|ACD96411.1| hypothetical protein Glov_2698 [Geobacter lovleyi SZ]
Length = 370
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 56/176 (31%), Gaps = 12/176 (6%)
Query: 19 GLASREKKKVFLHKSNDT------DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
AS E++ L + + + + +K F+ ++ G +V +
Sbjct: 198 ATASSEQRVAALTQELEGLKQQTAQLQATGEQLAAEKRIKAFEAEVGKLGGIVKSTSAGL 257
Query: 73 TCYIPVHVSFV---SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ P L + +A ++ +P I ++ H + +
Sbjct: 258 SVTFPRSQLLKVTGKSTTLTADGDKQIVKLAELVRTYPEYRIKLRVHGFGQPSRHEDAAA 317
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ A I+ L+ +G + G P+ G N+R+EI +
Sbjct: 318 TDHMARFIREGLLTKGKLEQATVEALGVGAAEPVYPKGNIEG---NRRVEIIFVKK 370
>gi|67639335|ref|ZP_00438203.1| OmpA domain protein [Burkholderia mallei GB8 horse 4]
gi|121597986|ref|YP_990337.1| hypothetical protein BMASAVP1_0732 [Burkholderia mallei SAVP1]
gi|126447196|ref|YP_001079177.1| hypothetical protein BMA10247_A2001 [Burkholderia mallei NCTC
10247]
gi|167003578|ref|ZP_02269364.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|254177240|ref|ZP_04883896.1| OmpA domain protein [Burkholderia mallei ATCC 10399]
gi|254203187|ref|ZP_04909549.1| OmpA family protein [Burkholderia mallei FMH]
gi|254208522|ref|ZP_04914871.1| OmpA family protein [Burkholderia mallei JHU]
gi|121225784|gb|ABM49315.1| OmpA domain protein [Burkholderia mallei SAVP1]
gi|126240050|gb|ABO03162.1| OmpA domain protein [Burkholderia mallei NCTC 10247]
gi|147746232|gb|EDK53310.1| OmpA family protein [Burkholderia mallei FMH]
gi|147751209|gb|EDK58277.1| OmpA family protein [Burkholderia mallei JHU]
gi|160698280|gb|EDP88250.1| OmpA domain protein [Burkholderia mallei ATCC 10399]
gi|238519871|gb|EEP83337.1| OmpA domain protein [Burkholderia mallei GB8 horse 4]
gi|243060913|gb|EES43099.1| OmpA family protein [Burkholderia mallei PRL-20]
Length = 552
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 4 ELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ ++ G + + + + + R + + L +
Sbjct: 297 RAAAVALGVLVLAYGAISFWLDSQGRPIRNALAAWMPPTRTINIAETLPPPLPQILTEGW 356
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + +F + + F+ ++ + +P + + HTDS
Sbjct: 357 LTAYKHPQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPG-DLEVIGHTDSRP 415
Query: 122 TLK----NNLLISQERADVIKSYLIQR---------GVSSNRFISVRGFAYKYPIDTNDT 168
+N +S+ RA + L + + R I G PIDT T
Sbjct: 416 IRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKT 475
Query: 169 KVGRQNNQRIEI--QIFPRG 186
+ N+R+++ ++ P G
Sbjct: 476 AAAYERNRRVDVLWKVIPDG 495
>gi|15804874|ref|NP_290915.1| hypothetical protein Z5895 [Escherichia coli O157:H7 EDL933]
gi|15834511|ref|NP_313284.1| hypothetical protein ECs5257 [Escherichia coli O157:H7 str. Sakai]
gi|168749548|ref|ZP_02774570.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|168754862|ref|ZP_02779869.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|168760537|ref|ZP_02785544.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|168766571|ref|ZP_02791578.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|168773999|ref|ZP_02799006.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|168782807|ref|ZP_02807814.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|168784934|ref|ZP_02809941.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|168797862|ref|ZP_02822869.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|170680753|ref|YP_001746734.1| hypothetical protein EcSMS35_4823 [Escherichia coli SMS-3-5]
gi|195937305|ref|ZP_03082687.1| hypothetical protein EscherichcoliO157_12775 [Escherichia coli
O157:H7 str. EC4024]
gi|208805799|ref|ZP_03248136.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208812352|ref|ZP_03253681.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208821526|ref|ZP_03261846.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209396899|ref|YP_002273822.1| hypothetical protein ECH74115_5802 [Escherichia coli O157:H7 str.
EC4115]
gi|217325545|ref|ZP_03441629.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|254796300|ref|YP_003081137.1| hypothetical protein ECSP_5382 [Escherichia coli O157:H7 str.
TW14359]
gi|261226603|ref|ZP_05940884.1| hypothetical protein EscherichiacoliO157_18722 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261256954|ref|ZP_05949487.1| hypothetical protein EscherichiacoliO157EcO_14173 [Escherichia coli
O157:H7 str. FRIK966]
gi|291285682|ref|YP_003502500.1| hypothetical protein G2583_5101 [Escherichia coli O55:H7 str.
CB9615]
gi|12519300|gb|AAG59481.1|AE005660_2 hypothetical protein Z5895 [Escherichia coli O157:H7 str. EDL933]
gi|13364735|dbj|BAB38680.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|170518471|gb|ACB16649.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
gi|187770296|gb|EDU34140.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|188016168|gb|EDU54290.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|188999800|gb|EDU68786.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|189357848|gb|EDU76267.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|189364307|gb|EDU82726.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|189368928|gb|EDU87344.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|189374962|gb|EDU93378.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|189379550|gb|EDU97966.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|208725600|gb|EDZ75201.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208733629|gb|EDZ82316.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208741649|gb|EDZ89331.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209158299|gb|ACI35732.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4115]
gi|217321766|gb|EEC30190.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|254595700|gb|ACT75061.1| predicted protein [Escherichia coli O157:H7 str. TW14359]
gi|290765555|gb|ADD59516.1| hypothetical protein G2583_5101 [Escherichia coli O55:H7 str.
CB9615]
gi|320639026|gb|EFX08672.1| hypothetical protein ECO5101_17161 [Escherichia coli O157:H7 str.
G5101]
gi|320644396|gb|EFX13461.1| hypothetical protein ECO9389_14588 [Escherichia coli O157:H- str.
493-89]
gi|320649714|gb|EFX18238.1| hypothetical protein ECO2687_22184 [Escherichia coli O157:H- str. H
2687]
gi|320660616|gb|EFX28077.1| hypothetical protein ECO5905_14943 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320665544|gb|EFX32590.1| hypothetical protein ECOSU61_14616 [Escherichia coli O157:H7 str.
LSU-61]
Length = 235
Score = 57.3 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 68/208 (32%), Gaps = 21/208 (10%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ +L + ++ + + K N + + + EF LQD
Sbjct: 22 MSDLMAGLMMVFMFISIAYMHYVRIEKEKIKEVAVAYENAQLQLY-NALDIEFAKDLQDW 80
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPS--TVIAIQS 115
+ + + P + + L+ KF +L +L+ + T + I+
Sbjct: 81 DAEIDKQTLEVRFKSPDVLFGLGSTELKPKFKLILDDFFPRYLKVLDNYQEHITEVRIEG 140
Query: 116 HTDSIGT--------LKNNLLISQERADVIKSY------LIQRGVSSNRFISVRGFAYKY 161
HT + T NN+ +SQ R + Y + + G++ +
Sbjct: 141 HTSTDWTGTTNPDIAYFNNMALSQGRTRAVLQYVYDIKNIATHQQWVKSKFAAVGYSSAH 200
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
PI K ++R+ ++ ++
Sbjct: 201 PILDKTGKEDPNRSRRVTFKVVTNAELQ 228
>gi|89889717|ref|ZP_01201228.1| hypothetical protein BBFL7_01535 [Flavobacteria bacterium BBFL7]
gi|89517990|gb|EAS20646.1| hypothetical protein BBFL7_01535 [Flavobacteria bacterium BBFL7]
Length = 352
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 14/119 (11%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS--------IGTLK 124
+ + + + ++ P+L +A IL I H
Sbjct: 233 VIRLENILFYKGRSTILEESQPLLDRVAEILIAREDIHFEIHGHVCCINPAYPDAYNRDT 292
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S RA I L RGV R +G+ P+ D + ++R+E+ I
Sbjct: 293 KKSNLSHARALAIYKILRSRGVKHTRM-RFKGYGRTRPLGGID-----KLDRRVELYIT 345
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 10/123 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V + L L P + I + D G+ + NL +S R + +
Sbjct: 25 SVYFDVDKDQFSFSEGKQLTSFFDDLIYKPILTVKILGYCDDRGSHEYNLDLSNRRVETV 84
Query: 138 KSYLIQRGVSSNRF-ISVRGFAY---KYPIDTNDTKVGRQNNQR--IEIQI----FPRGN 187
+L + V G + +D +T+ R N+R +E + R
Sbjct: 85 SEWLENHDIELENISKKVEGLGEVALEDELDFQETEEIRAQNRRVDVEFSLSADRTKRVA 144
Query: 188 IKK 190
IKK
Sbjct: 145 IKK 147
>gi|283832712|ref|ZP_06352453.1| chemotaxis MotB protein [Citrobacter youngae ATCC 29220]
gi|291072391|gb|EFE10500.1| chemotaxis MotB protein [Citrobacter youngae ATCC 29220]
Length = 309
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 10/144 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A+ + + I + + G I + +E +L+ IA +LN
Sbjct: 128 EADPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGI 187
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ + + V G A
Sbjct: 188 PN-RISLSGHTDDYPYANGEKGYSNWELSADRANASRRELVSGGLDDGKVLRVVGMAATM 246
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
+ + N+RI + + +
Sbjct: 247 RLSDRGPED--AINRRISLLVLNK 268
>gi|291615400|ref|YP_003525557.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
gi|291585512|gb|ADE13170.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
Length = 204
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L + + M+ I + + + + + H G + NL +S +RA V++
Sbjct: 103 FEEDGAKLTAESINMIADIRQEITRRAAPEVVVTGHASRAGMDETNLSLSMQRAKVVRDV 162
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + I V G P T V ++R+EI +
Sbjct: 163 LVAG-GVPAQIIQVVGRGEFDPAATTQDGVAGPPSRRVEITV 203
>gi|261821136|ref|YP_003259242.1| OmpA/MotB domain protein [Pectobacterium wasabiae WPP163]
gi|261605149|gb|ACX87635.1| OmpA/MotB domain protein [Pectobacterium wasabiae WPP163]
Length = 350
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 67/190 (35%), Gaps = 19/190 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVS 66
G G ++ ++ K + L+K + ++ I +
Sbjct: 83 GGGNDPTQQDGEVKKAIKTDNVEKKLDEARLNKLRERLDQLIEADPRLRALRPHLLIEMI 142
Query: 67 RIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
G I + +E +L+ IA ILN FP+ ++I HTD +
Sbjct: 143 EEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIAPILNDFPN-KLSISGHTDDVQYTT 201
Query: 125 -----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+N +S +RA+ + L G+S + + V G A + T N+RI
Sbjct: 202 GERGYSNWELSADRANASRRELTFGGLSDGKVLRVVGMAATMSL-KQATSGNDAINRRIS 260
Query: 180 IQIFPRGNIK 189
+ + + K
Sbjct: 261 LLVLSKQAQK 270
>gi|330828258|ref|YP_004391210.1| outer membrane protein A [Aeromonas veronii B565]
gi|328803394|gb|AEB48593.1| Outer membrane protein A [Aeromonas veronii B565]
Length = 345
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + + + V + HTD IG+ N +S++RA
Sbjct: 223 SDVLFDFNKATLKPEASQALDSLYSQIEEARPKDGVATVIGHTDRIGSDAYNQKLSEQRA 282
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR------QNNQRIEIQI 182
+ +YL+ + I+V G P+ D+ +K R ++R+++++
Sbjct: 283 QTVANYLVGK-GIPAAKINVEGRGKSSPVTGDSCVSKSKRELIVCLAPDRRVDVKV 337
>gi|254187351|ref|ZP_04893865.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|157935033|gb|EDO90703.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
Length = 571
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 4 ELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ ++ G + + + + + R + + L +
Sbjct: 316 RAAAVALGVLVLAYGAISFWLDSQGRPIRNALAAWMPPTRTINIAETLPPPLPQILTEGW 375
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + +F + + F+ ++ + +P + + HTDS
Sbjct: 376 LTAYKHPQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPG-DLEVIGHTDSRP 434
Query: 122 TLK----NNLLISQERADVIKSYLIQR---------GVSSNRFISVRGFAYKYPIDTNDT 168
+N +S+ RA + L + + R I G PIDT T
Sbjct: 435 IRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKT 494
Query: 169 KVGRQNNQRIEI--QIFPRG 186
+ N+R+++ ++ P G
Sbjct: 495 AAAYERNRRVDVLWKVIPDG 514
>gi|270159049|ref|ZP_06187705.1| IcmN (DotK) [Legionella longbeachae D-4968]
gi|269987388|gb|EEZ93643.1| IcmN (DotK) [Legionella longbeachae D-4968]
Length = 183
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 19/182 (10%)
Query: 6 GLSMFIMTTISGCGLA----SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ + + ++ C +E+ K ++ + + + L
Sbjct: 9 AVGLAALLMVTSCSRDHWALDKEEPKY------PCKVLGACDATIM-----KLAKNLNRK 57
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G+ V IG IP F SE L+ K +L IA L +F I I S++
Sbjct: 58 GVKVITIGQDYMISIPASYLFESETPHLKWKSYALLNEIAVFLKQFRKIAINIASYSSKY 117
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-QNNQRIE 179
+ + ++ R+ V+ YL + +RFI +G PI T+ G N R+E
Sbjct: 118 ISPQREHALTLARSRVVSEYLWSQ-GVDSRFIFTQGLGSDKPIIA-YTEGGDSSVNARVE 175
Query: 180 IQ 181
I
Sbjct: 176 IT 177
>gi|323529167|ref|YP_004231319.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323386169|gb|ADX58259.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 366
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 12/112 (10%)
Query: 78 VHVSFVSEVFLE---KKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQER 133
L L + L + I I+ +TD +G+ N +S R
Sbjct: 232 DATFKFDRSDLGGMLPAGKAKLDQLVRDLKQVDDVTGIRIEGYTDRLGSESYNRQLSTRR 291
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK------VGRQNNQRIE 179
A+ +K YL + + I+ RG P+ + + N+R+E
Sbjct: 292 AETVKRYL--QNGGVSTPIAARGRGKDNPVVQCNDRNRQALIDCLAPNRRVE 341
>gi|237731926|ref|ZP_04562407.1| flagellar motor protein MotB [Citrobacter sp. 30_2]
gi|226907465|gb|EEH93383.1| flagellar motor protein MotB [Citrobacter sp. 30_2]
Length = 309
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 68/205 (33%), Gaps = 33/205 (16%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKR-------------FGSSLDKAEDEFQMQ 57
+ T ++G S + + + T + S L K +
Sbjct: 67 LATAVTGGNRISNSQSPIPGGGDDYTQQQGEVNKQPNIDDLRKRMEQSRLSKLRGDLDQL 126
Query: 58 LQDTG----------IVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
++ I + + G I + +E +L+ IA +LN
Sbjct: 127 IESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNG 186
Query: 106 FPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
P+ I++ HTD +N +S +RA+ + L+ G+ + + V G A
Sbjct: 187 IPN-RISLSGHTDDYPYANGEKGYSNWELSADRANASRRELVSGGLDDGKVLRVVGMAAT 245
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + N+RI + + +
Sbjct: 246 MRLSDRGPED--AINRRISLLVLNK 268
>gi|289166115|ref|YP_003456253.1| Hypothetical protein of unknown function [Legionella longbeachae
NSW150]
gi|18693264|gb|AAL78305.1|AF288617_2 DotK [Legionella longbeachae]
gi|288859288|emb|CBJ13222.1| Hypothetical protein of unknown function [Legionella longbeachae
NSW150]
Length = 167
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 4/131 (3%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVI 111
+ L G+ V IG IP F SE L+ K +L IA L +F I
Sbjct: 33 KLAKNLNRKGVKVITIGQDYMISIPASYLFESETPHLKWKSYALLNEIAVFLKQFRKIAI 92
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I S++ + + ++ R+ V+ YL + +RFI +G PI T+ G
Sbjct: 93 NIASYSSKYISPQREHALTLARSRVVSEYLWSQ-GVDSRFIFTQGLGSDKPIIA-YTEGG 150
Query: 172 R-QNNQRIEIQ 181
N R+EI
Sbjct: 151 DSSVNARVEIT 161
>gi|238919361|ref|YP_002932876.1| OmpA family protein [Edwardsiella ictaluri 93-146]
gi|238868930|gb|ACR68641.1| OmpA family protein [Edwardsiella ictaluri 93-146]
Length = 270
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 67/170 (39%), Gaps = 20/170 (11%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRIGDMITCYIPVH----V 80
+ D D + L + + + + ++++ + + I +
Sbjct: 102 AADPDPKTRTDQMRLKRLRERLEQLILSDPRLKLLRPHLMINMTDEGLRIQIVDSQKRPM 161
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERAD 135
+E +L+ IA ILN+ P+ I++ HTD + +N +S +RA+
Sbjct: 162 FKNGSAQVEPYMRYILRAIAPILNELPN-KISLSGHTDDLPYANGEKGYSNWELSADRAN 220
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ L+ G+ SN+ + V G A + ++ N+RI I + +
Sbjct: 221 ASRRELMAGGLDSNKILRVVGMADTMNL--HNMAGNAAENRRISILVLNK 268
>gi|170739239|ref|YP_001767894.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
gi|168193513|gb|ACA15460.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
Length = 178
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 52/181 (28%), Gaps = 11/181 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + S+ + + C + + + L K +
Sbjct: 1 MRGKFTASILALAAV--CAGHAAVAGPAYTAEDIVKKFAPAD---PLGKTRGLCIGTHSE 55
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP--STVIAIQSHTD 118
V + V + L L A L S+ ++ HTD
Sbjct: 56 CNAGVETRARPTGSFDLVVNFDYNSDQLTGAAKQNLDEFAKALRDDRLRSSTFLVEGHTD 115
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ G + NL +S RAD + + ++ RG P+ N N+R+
Sbjct: 116 ARGGEEFNLGLSGRRADAVVR-YLSGRGVLAAQLTARGLGKSRPLTDNPLD---PANRRV 171
Query: 179 E 179
E
Sbjct: 172 E 172
>gi|150395498|ref|YP_001325965.1| flagellar motor protein MotB [Sinorhizobium medicae WSM419]
gi|150027013|gb|ABR59130.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419]
Length = 397
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 65/176 (36%), Gaps = 16/176 (9%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT------GIVVSRIGDMIT 73
A + + + + + + + E + +L G+VV+ +
Sbjct: 220 SAKALQNQANAEDRTENEAAAEDRQQEAEALKAEIERELGGEAGRLLEGLVVAPAEGGLL 279
Query: 74 CYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NN 126
I + V +K+ + ++ I +L + P +A++ HTD +N
Sbjct: 280 VTISEQTDAPMFAVGSAVPQKELVLAMEKIGRLLAQRPGA-VAVRGHTDGRPFKDGTYDN 338
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S RA L++ G+ R + GFA + ND N+RIEI +
Sbjct: 339 WRLSAARAQSAYYMLVRGGLKEERVKQISGFADRRLQVPNDPYA--PANRRIEILL 392
>gi|108763487|ref|YP_633317.1| OmpA family protein [Myxococcus xanthus DK 1622]
gi|108467367|gb|ABF92552.1| OmpA family protein [Myxococcus xanthus DK 1622]
Length = 171
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 65/182 (35%), Gaps = 16/182 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L +++ ++T + + + + + + +
Sbjct: 3 LKALCITVSLLTL-------PGVAFAQGGFGALTKAAGDAGKSAVEKRVNTKLMDEGRQN 55
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + ++ + L +A + + + HTDS G
Sbjct: 56 QCSFKTGTAQLDAGCEAKLKKLTNALV--DAKKQL--VAAGVKSY---KFEVSGHTDSTG 108
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQRIEI 180
N +S++RA+ I LI RG+ I+V G+ + P+ +DT + N+R E+
Sbjct: 109 DAAKNKKLSEQRAETIVKELIARGIPRGEIIAV-GYGSEKPLVKPDDTAAKKAKNRRYEL 167
Query: 181 QI 182
Q+
Sbjct: 168 QV 169
>gi|224418309|ref|ZP_03656315.1| putative flagellar motor protein [Helicobacter canadensis MIT
98-5491]
gi|253827631|ref|ZP_04870516.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491]
gi|253511037|gb|EES89696.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491]
Length = 276
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 61/163 (37%), Gaps = 10/163 (6%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVSEVFLEKK 91
+ D + + + E + ++ VV G + + F E +
Sbjct: 80 TTDPETAEQIIKVQSEILEFKEDARVSLGPSVVEDDGKEGFILRFHGRLLFDEEKTAIEN 139
Query: 92 FLPML--QLIATILNKFPST-VIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQ 143
+L + +A IL K P T + I + D++ +++L +S RA + LI+
Sbjct: 140 ADEILFLKRLALILQKMPQTMHLDIIGYADNVEGKPNLKYQDSLGLSALRASNVAKILIE 199
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ + I+ G + N R N+R+E +P+
Sbjct: 200 NQ-VNPQKITSLGGGATNFLLPNTNAENRAQNRRVEFHFYPQD 241
>gi|256828231|ref|YP_003156959.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256577407|gb|ACU88543.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 585
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L+++ L I ++ + I + ++DS+G +NL +S++RA+ +
Sbjct: 484 FETGNLSLDEQGGRDLARIVAMMKEPKNSGKTIVLVGYSDSVGAYASNLAVSRKRAEAVA 543
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+RG+ ++ + I+ ND + GR+ N+R+EI +
Sbjct: 544 EAFRKRGLQDVVVLAA---GEEGAIERNDIRAGREKNRRVEIWL 584
>gi|209767218|gb|ACI81921.1| chemotaxis protein MotB [Escherichia coli]
gi|320647103|gb|EFX15936.1| flagellar motor protein MotB [Escherichia coli O157:H- str. 493-89]
gi|320652386|gb|EFX20684.1| flagellar motor protein MotB [Escherichia coli O157:H- str. H 2687]
Length = 308
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 68/190 (35%), Gaps = 20/190 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVS 66
GCG + + + N ++ + S L K + ++ I +
Sbjct: 85 GCGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLRGDLDQLIESDPKLRALRPHLKIDLV 144
Query: 67 RIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ G I + +E +L+ IA +LN P+ I++ HTD
Sbjct: 145 QEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPN-RISLSGHTDDFPYAS 203
Query: 125 -----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+N +S +RA+ + L+ G+ S + + V G A + N+RI
Sbjct: 204 GEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRIS 261
Query: 180 IQIFPRGNIK 189
+ + + +
Sbjct: 262 LLVLNKQAEQ 271
>gi|145298279|ref|YP_001141120.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142851051|gb|ABO89372.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 352
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 47/118 (39%), Gaps = 12/118 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + + L + + + +TD IG+ NNL +S+ RA
Sbjct: 221 SDVLFAFGKAELKPEGMQALDALYQQIVDVQPKDGSALVMGYTDRIGSDINNLALSEARA 280
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN---------NQRIEIQIF 183
+ ++LI + +S++G P+ + + ++R+E+++
Sbjct: 281 STVANFLIGK-GLPADKVSIQGNGESNPVTGSQCDAIKAKAALIDCLGPDRRVEVRVT 337
>gi|251733451|emb|CAR82475.1| pal [Rhizobium giardinii]
Length = 87
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L ++P+ I I+ H D GT + NL + RA + YL
Sbjct: 2 DSTSIRADAQATLDKQAQWLQRYPNYAITIEGHADERGTREYNLALGARRAAATRDYLAS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RG+ + + ++ + + P+ D
Sbjct: 62 RGIPAGKMKTIS-YGKEKPVAVCDD 85
>gi|90409122|ref|ZP_01217243.1| outer membrane protein A [Psychromonas sp. CNPT3]
gi|90309773|gb|EAS37937.1| outer membrane protein A [Psychromonas sp. CNPT3]
Length = 318
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + T L + + + +TD+ G NL +S++R IK L+ RGV +++ V
Sbjct: 226 LDIAITRLTTYKKATVVLTGYTDNTGKETFNLQLSKQRVQSIKKTLLDRGVQASQITEVY 285
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
PI ND++ R N+R++I +
Sbjct: 286 -KGESDPIIGNDSREHRHLNRRVDILL 311
>gi|7327635|gb|AAF45029.2|AF146597_1 putative outer membrane protein [Aeromonas hydrophila]
Length = 344
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/152 (11%), Positives = 54/152 (35%), Gaps = 12/152 (7%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--P 107
+++ ++ + + + L+ + + L + + +F
Sbjct: 194 VAPAPAPVVEEAPAPAPQVVEKNFALNSDVLFAFGKDSLKPEGVAALNALYQQIVEFQPK 253
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ +TD IG+ N +S+ RA + ++L+ + + +++ G P+
Sbjct: 254 DGNAVVVGYTDRIGSDAYNQKLSEARARTVANFLVSK-GMAASKVAIEGRGEANPVTGTK 312
Query: 168 TK---------VGRQNNQRIEIQIFPRGNIKK 190
++R+E+++ ++K
Sbjct: 313 CDGVKAKAQLISCLAPDRRVEVRVSGVQEVQK 344
>gi|167824061|ref|ZP_02455532.1| hypothetical protein Bpseu9_10300 [Burkholderia pseudomallei 9]
Length = 290
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 13/122 (10%)
Query: 73 TCYIPVHVSFVSEV----FLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNN 126
+P F + + L + + F + + +TD +G+ ++N
Sbjct: 167 RVELPTDTLFAFDKGGFEDISADGRRQLGDLVASIKAKIFSINHLIVTGYTDRLGSDEHN 226
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEI 180
+S ERA + Y+I I+ G P+ + Q N+R+EI
Sbjct: 227 ARLSSERARTVADYMIAE-GIPAAKITAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEI 285
Query: 181 QI 182
+I
Sbjct: 286 RI 287
>gi|167738461|ref|ZP_02411235.1| hypothetical protein Bpse14_10350 [Burkholderia pseudomallei 14]
gi|167815654|ref|ZP_02447334.1| hypothetical protein Bpse9_10954 [Burkholderia pseudomallei 91]
gi|254188891|ref|ZP_04895402.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|157936570|gb|EDO92240.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
Length = 277
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 13/122 (10%)
Query: 73 TCYIPVHVSFVSEV----FLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNN 126
+P F + + L + + F + + +TD +G+ ++N
Sbjct: 154 RVELPTDTLFAFDKGGFEDISADGRRQLGDLVASIKAKIFSINHLIVTGYTDRLGSDEHN 213
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEI 180
+S ERA + Y+I I+ G P+ + Q N+R+EI
Sbjct: 214 ARLSSERARTVADYMIAE-GIPAAKITAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEI 272
Query: 181 QI 182
+I
Sbjct: 273 RI 274
>gi|52842529|ref|YP_096328.1| flagellar motor protein MotB [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629640|gb|AAU28381.1| chemotaxis (motility protein B) transmembrane [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
Length = 312
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 71/179 (39%), Gaps = 12/179 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+E + ++ + + S++K + + + V G I
Sbjct: 133 AKDKEIVESQANEIKKLEELKSEINLSMEK-DPSLAGLKKQLLMDVVSDGLRIQLIDNQK 191
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN------NLLISQ 131
+ V + + P+L IA +LN P+ I IQ HTD+ N +S
Sbjct: 192 KPMFDVGSDKINPEIEPILANIAKLLNSVPN-KITIQGHTDANPYHNPEELEYTNWELSA 250
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+RA+ + LI+ G+ N+ ++V G++ +D + N+RI I + +G K
Sbjct: 251 QRANAARRALIKAGMDENKVMTVTGYSSTILLDKKNPY--NPENRRISIIVMKKGAENK 307
>gi|76819156|ref|YP_337240.1| hypothetical protein BURPS1710b_A2089 [Burkholderia pseudomallei
1710b]
gi|237509287|ref|ZP_04522002.1| type IV / VI secretion system protein, DotU family [Burkholderia
pseudomallei MSHR346]
gi|254198855|ref|ZP_04905273.1| ompA family protein [Burkholderia pseudomallei S13]
gi|254264296|ref|ZP_04955161.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|76583629|gb|ABA53103.1| OmpA domain protein [Burkholderia pseudomallei 1710b]
gi|169657027|gb|EDS88421.1| ompA family protein [Burkholderia pseudomallei S13]
gi|235001492|gb|EEP50916.1| type IV / VI secretion system protein, DotU family [Burkholderia
pseudomallei MSHR346]
gi|254215298|gb|EET04683.1| ompA family protein [Burkholderia pseudomallei 1710a]
Length = 571
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 4 ELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ ++ G + + + + + R + + L +
Sbjct: 316 RAAAVALGVLVLAYGAISFWLDSQGRPIRNALAAWMPPTRTINIAETLPPPLPQILTEGW 375
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + +F + + F+ ++ + +P + + HTDS
Sbjct: 376 LTAYKHPQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPG-DLEVIGHTDSRP 434
Query: 122 TLK----NNLLISQERADVIKSYLIQR---------GVSSNRFISVRGFAYKYPIDTNDT 168
+N +S+ RA + L + + R I G PIDT T
Sbjct: 435 IRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKT 494
Query: 169 KVGRQNNQRIEI--QIFPRG 186
+ N+R+++ ++ P G
Sbjct: 495 AAAYERNRRVDVLWKVIPDG 514
>gi|312885105|ref|ZP_07744791.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367234|gb|EFP94800.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 1569
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 58/172 (33%), Gaps = 12/172 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV-VSRIGDMITCYIPVHV 80
+ + ++ D + + + +E G+ V + +
Sbjct: 558 ATSSLQRTSLQAAQDDKKKSEYQAVVTSLREELNKLSYQDGVSIVEGTVGDLKVRLDATH 617
Query: 81 SFVSEVFLE--KKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ ++ ++ Q I L K I I HT IG+ + NL +S +RA
Sbjct: 618 FAFNSDKIQVLEEKGNPYQTIGANLAKIAHSPFQIVIAGHTCDIGSEEVNLNLSMKRAIA 677
Query: 137 IKSYLIQRGVSSNR-----FISVRGFAYKYPI--DTNDTKVGRQNNQRIEIQ 181
+K+ ++ R + P+ + N + R N+R+EI
Sbjct: 678 VKNAILNAISGEGRQAWEGMFVTEAHGFSKPLPGNENRNEHERAKNRRVEIL 729
>gi|2275156|gb|AAB81408.1| MotB [Sinorhizobium meliloti]
Length = 394
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 65/180 (36%), Gaps = 19/180 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED---EFQMQLQDT------GIVVSRIG 69
A K K+ D + +AE E + +L G+ V+
Sbjct: 213 ASAPEVPDKAEGAKAADAPENQAPAENPQKEAEALKAEIEKELGGEAGRLLEGLAVTPAE 272
Query: 70 DMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK- 124
+ I + V +K+ + ++ I +L + P +A++ HTD
Sbjct: 273 GGLLVTISEQTDAPMFAVGSAVPQKELVLAMEKIGRLLAERPGA-VAVRGHTDGRPFKDG 331
Query: 125 --NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S RA L++ G+ R + GFA + ND N+RIEI +
Sbjct: 332 TYDNWRLSAARAQSAYYMLVRGGLEEERVKQISGFADRRLQVPNDAYA--PANRRIEILL 389
>gi|320190585|gb|EFW65235.1| hypothetical protein ECoD_02000 [Escherichia coli O157:H7 str.
EC1212]
gi|326345387|gb|EGD69130.1| hypothetical protein ECF_01276 [Escherichia coli O157:H7 str. 1125]
gi|326346758|gb|EGD70492.1| hypothetical protein ECoA_01138 [Escherichia coli O157:H7 str.
1044]
Length = 206
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 57/162 (35%), Gaps = 20/162 (12%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TIL 103
+ + EF LQD + + + P + + L+ KF +L +L
Sbjct: 38 NALDIEFAKDLQDWDAEIDKQTLEVRFKSPDVLFGLGSTELKPKFKLILDDFFPRYLKVL 97
Query: 104 NKFPS--TVIAIQSHTDSIGT--------LKNNLLISQERADVIKSY------LIQRGVS 147
+ + T + I+ HT + T NN+ +SQ R + Y +
Sbjct: 98 DNYQEHITEVRIEGHTSTDWTGTTNPDIAYFNNMALSQGRTRAVLQYVYDIKNIATHQQW 157
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ G++ +PI K ++R+ ++ ++
Sbjct: 158 VKSKFAAVGYSSAHPILDKTGKEDPNRSRRVTFKVVTNAELQ 199
>gi|262199615|ref|YP_003270824.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262082962|gb|ACY18931.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 342
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 57/171 (33%), Gaps = 15/171 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC ++ +V + + D D L + + +
Sbjct: 171 GCPDIDDDRDQVLDIADGCR-LAPENINGYRDG--DGCPDVLPPELVELVPAPRAL---- 223
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQE 132
+ S L + ++ +A +L + PS I I H D +S
Sbjct: 224 ---LFRRSGDALRTRSEAVVDHLADLLERHPSVRIVIVGHVDPGELDDEDADAEHTLSLR 280
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ + + R S R + V A ++P+ + R N+R+ +++
Sbjct: 281 RAETV-REALIRRGVSVRRLEVWDAAAEFPLSEGSSSHERARNRRVTVRVL 330
>gi|53719284|ref|YP_108270.1| hypothetical protein BPSL1659 [Burkholderia pseudomallei K96243]
gi|52209698|emb|CAH35657.1| putative exported protein [Burkholderia pseudomallei K96243]
Length = 299
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 13/122 (10%)
Query: 73 TCYIPVHVSFVSEV----FLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNN 126
+P F + + L + + F + + +TD +G+ ++N
Sbjct: 176 RVELPTDTLFAFDKGGFEDISADGRRQLGDLVASIKAKIFSINHLIVTGYTDRLGSDEHN 235
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEI 180
+S ERA + Y+I I+ G P+ + Q N+R+EI
Sbjct: 236 ARLSSERARTVADYMIAE-GIPAAKITAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEI 294
Query: 181 QI 182
+I
Sbjct: 295 RI 296
>gi|53716506|ref|YP_105228.1| hypothetical protein BMAA0453 [Burkholderia mallei ATCC 23344]
gi|52422476|gb|AAU46046.1| OmpA domain protein [Burkholderia mallei ATCC 23344]
Length = 571
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 4 ELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ ++ G + + + + + R + + L +
Sbjct: 316 RAAAVALGVLVLAYGAISFWLDSQGRPIRNALAAWMPPTRTINIAETLPPPLPQILTEGW 375
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + +F + + F+ ++ + +P + + HTDS
Sbjct: 376 LTAYKHPQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPG-DLEVIGHTDSRP 434
Query: 122 TLK----NNLLISQERADVIKSYLIQR---------GVSSNRFISVRGFAYKYPIDTNDT 168
+N +S+ RA + L + + R I G PIDT T
Sbjct: 435 IRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKT 494
Query: 169 KVGRQNNQRIEI--QIFPRG 186
+ N+R+++ ++ P G
Sbjct: 495 AAAYERNRRVDVLWKVIPDG 514
>gi|54298209|ref|YP_124578.1| flagellar motor protein MotB [Legionella pneumophila str. Paris]
gi|53751994|emb|CAH13420.1| hypothetical protein lpp2267 [Legionella pneumophila str. Paris]
Length = 312
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 71/179 (39%), Gaps = 12/179 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+E + ++ + + S++K + + + V G I
Sbjct: 133 AKDKEIIESQANEIKKLEELKSEINLSMEK-DPSLAGLKKQLLMDVVSDGLRIQLIDNQK 191
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN------NLLISQ 131
+ V + + P+L IA +LN P+ I IQ HTD+ N +S
Sbjct: 192 KPMFDVGSDKINPEIEPILANIAKLLNSVPN-KITIQGHTDANPYHNPEELEYTNWELSA 250
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+RA+ + LI+ G+ N+ ++V G++ +D + N+RI I + +G K
Sbjct: 251 QRANAARRALIKAGMDENKVMTVTGYSSTVLLDKKNPY--NPENRRISIIVMKKGAENK 307
>gi|323700139|ref|ZP_08112051.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323460071|gb|EGB15936.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 241
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 54/140 (38%), Gaps = 10/140 (7%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
D DE + + V D + + F L ++ + ++ +
Sbjct: 98 DILPDEISKAELNDNLDVLAKQDGVALVFTDRILFAPGGSELSDTGKFLMARLVPMMTQT 157
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
I + +TD+ + L +S +RA + ++L+ + + S+ + +P+
Sbjct: 158 -DAPINVAGYTDASDATQTPLELSGDRALAVLAFLVDK-GVHDSRFSLSAYGDAFPVI-- 213
Query: 167 DTKVGRQ----NNQRIEIQI 182
++GR N+R+EI +
Sbjct: 214 -NELGRPVASPRNRRVEILL 232
>gi|258620793|ref|ZP_05715828.1| outer membrane protein [Vibrio mimicus VM573]
gi|258586991|gb|EEW11705.1| outer membrane protein [Vibrio mimicus VM573]
Length = 173
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 58/153 (37%), Gaps = 14/153 (9%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
++ + L++++ + +++ + + + P ++ L +
Sbjct: 32 SETQVQHTNQILNESKQQVEVKHRSDLCTYDEQSQSLLLHYP-----FNKYQLSGPHQEI 86
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
LQ +++ I ++ H D G K N +S+ RA + YL NR + +
Sbjct: 87 LQTYVSMV--DSQYKIVVEGHADQTGNPKYNQALSERRAGAVTRYLRDTLKLGNRIVE-K 143
Query: 156 GFAYKYPIDTNDTKVGRQN---NQRIEIQIFPR 185
GF P+ T N+R+ + I P+
Sbjct: 144 GFGESAPVC---TVQENAQTGCNRRVVLTIQPQ 173
>gi|149202957|ref|ZP_01879928.1| OmpA/MotB [Roseovarius sp. TM1035]
gi|149143503|gb|EDM31539.1| OmpA/MotB [Roseovarius sp. TM1035]
Length = 518
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 52/161 (32%), Gaps = 13/161 (8%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--------SFVSEV 86
+ ++ D F + G V + + V
Sbjct: 357 AGFVDQTPEEIEINAQGDRFANAIAQAGTEVGLEELQRMVRVLGPLKRLTTTFRFEAGSV 416
Query: 87 FLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS--YLI 142
L+ + + +A + + + + +D G N I+ RA+ ++
Sbjct: 417 RLDAQSRSNAEQLARAMELGHYDARRLVFVGFSDGDGPAGTNRDIALRRAETVQRAVMRA 476
Query: 143 QRGVSSNRF-ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ R + + F P+ +DT GRQ N+R+E+ +
Sbjct: 477 AETANLERIGLELDAFGEAMPMACDDTAWGRQVNRRVEVWV 517
>gi|318605218|emb|CBY26716.1| flagellar motor rotation protein MotB [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 409
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 72/203 (35%), Gaps = 31/203 (15%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKR-----------FGSSLDKAEDEFQMQLQDT 61
+S +S + + T V + L+K ++ ++
Sbjct: 69 VALSSGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDSEESRKEEYRLNKLREKLDQLIESD 128
Query: 62 G--------IVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPST 109
++++ + + + I + + +E +L+ IA ILN P+
Sbjct: 129 PRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPN- 187
Query: 110 VIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I++ HTD + +N +S +RA+ + L+ G+ + + V G A +
Sbjct: 188 KISLSGHTDDLPYASGERGYSNWELSADRANASRRELLAGGLDEGKVLRVVGMASTMRLK 247
Query: 165 TNDTKVGRQNNQRIEIQIFPRGN 187
+ N+RI I + +
Sbjct: 248 EQASDD--PVNRRISILVLNKQT 268
>gi|289207762|ref|YP_003459828.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288943393|gb|ADC71092.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 325
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 67/173 (38%), Gaps = 18/173 (10%)
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI----------VVSRIGDMITCYIPV 78
L ++ R +L+ ++ + L+ + ++ G I
Sbjct: 110 GLDDEALDELAEARDREALEVLQEALEEALEQSQALEPYKDQLLLDITPEGLRIQIIDRE 169
Query: 79 H--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG---TLKNNLLISQER 133
+ + + +L+ +A+++NK P+ I+I HTD+ +N +S +R
Sbjct: 170 NRPMFDTASSTPLPHADAILRELASLINKVPN-RISITGHTDARPLLRPDYSNWELSADR 228
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
A+ + LI G S + V G A P +D + N+RI I + +
Sbjct: 229 ANAARRALIAGGAESGQVARVVGLADSVPFTRDDPEA--AINRRISIIVLNQE 279
>gi|163784522|ref|ZP_02179384.1| flagellar motor protein MotB-like protein [Hydrogenivirga sp.
128-5-R1-1]
gi|159880208|gb|EDP73850.1| flagellar motor protein MotB-like protein [Hydrogenivirga sp.
128-5-R1-1]
Length = 234
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 48/149 (32%), Gaps = 12/149 (8%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
+ + L + I + + + ++F L + L IA + K+
Sbjct: 80 IKKRLERILPIYAYQIDSIENYVLIRLFNDIAFKEDSYQLTDEAKKALNEIAKKIKKYSG 139
Query: 109 T--VIAIQSHTDSIGTLKNNL-----LISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
I + H K + + + ++ + I + + K
Sbjct: 140 YFDEIRVVGHAYVKNKSKLPRGIKDAWDLSIKRAEVIADILIKNGIKKDKIVLEAYGNKK 199
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
PI + ++ N R+EI + N+K+
Sbjct: 200 PIYRWKNPILQRMNDRVEIYL----NVKQ 224
>gi|23499825|ref|NP_699265.1| putative lipoprotein [Brucella suis 1330]
gi|161620148|ref|YP_001594034.1| TraQ protein [Brucella canis ATCC 23365]
gi|254702492|ref|ZP_05164320.1| TraQ protein [Brucella suis bv. 3 str. 686]
gi|260568602|ref|ZP_05839071.1| outer membrane protein OprF [Brucella suis bv. 4 str. 40]
gi|261753065|ref|ZP_05996774.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|81789251|sp|Q9RPX3|YU58_BRUSU RecName: Full=Type IV secretion system putative outer membrane
lipoprotein BRA0058; Flags: Precursor
gi|5929877|gb|AAD56622.1|AF141604_12 ORF12 [Brucella suis 1330]
gi|23463394|gb|AAN33270.1| lipoprotein, putative [Brucella suis 1330]
gi|161336959|gb|ABX63263.1| TraQ protein [Brucella canis ATCC 23365]
gi|260155267|gb|EEW90348.1| outer membrane protein OprF [Brucella suis bv. 4 str. 40]
gi|261742818|gb|EEY30744.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 172
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 65/186 (34%), Gaps = 19/186 (10%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + +++ C + H+ + L E Q
Sbjct: 2 RTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQ-EELRLQVFPQEPTAQATMWPA 60
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + V V + + + L + + K I ++ TD+
Sbjct: 61 RPPKQTVSVYFPQDVTVFRPTSAQINQ-----LHTLLWPVPKH----INVRGLTDNNCPP 111
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFIS----VRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ +++ RA I ++LI +GVS++R V+ +A P+ GR N+R++
Sbjct: 112 PGDTQVARVRALAIYNWLINQGVSASRITISYAPVKDYASNAPLSP-----GRVLNRRVD 166
Query: 180 IQIFPR 185
I+I +
Sbjct: 167 IEILRK 172
>gi|326405348|ref|YP_004285430.1| hypothetical protein ACMV_32010 [Acidiphilium multivorum AIU301]
gi|325052210|dbj|BAJ82548.1| hypothetical protein ACMV_32010 [Acidiphilium multivorum AIU301]
Length = 203
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 2/103 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATIL--NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L + + L + L + + HTD+ G NL +SQ RA +K
Sbjct: 97 FATGSAKLTPQAVTELDRLGRALTDKTLAAYHFRVVGHTDTTGAASTNLALSQARAAAVK 156
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+YL+ + + G + V + N+R++I
Sbjct: 157 TYLMSKFDIPATRLQATGVGEADLLVPTGPNVANRANRRVQII 199
>gi|254360704|ref|ZP_04976852.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
haemolytica PHL213]
gi|153091274|gb|EDN73248.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
haemolytica PHL213]
Length = 161
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 55/179 (30%), Gaps = 25/179 (13%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K ++ + ++ + ++ A
Sbjct: 1 MKKFAKVLMVAVPAFALAA-------------------CSSSSDDAAANAAANAAANAAA 41
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G + + +E ++ +L A +L K + I H D
Sbjct: 42 NAAGEFGGLTAEQLKAQYNTVYFGFDSYAVEGEYRQLLDAHAQLLAKTQG-NVTIAGHAD 100
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
GT + N+ + Q RAD +K YL +G ++ S + + P ++ N+R
Sbjct: 101 ERGTPEYNIALGQRRADAVKGYLAAKGANNT---STVSYGEEKPAVLGHSEADYAKNRR 156
>gi|90409039|ref|ZP_01217166.1| sodium-type flagellar protein MotY [Psychromonas sp. CNPT3]
gi|90309846|gb|EAS38004.1| sodium-type flagellar protein MotY [Psychromonas sp. CNPT3]
Length = 232
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 87 FLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L++I + + VI + ++D+ GT +N+ +S +RA+ I ++
Sbjct: 132 QLDTFSKKRLKMIGDYIQYDENISVILLSGYSDAYGTESHNMALSTKRAEAI-KSYLKEI 190
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I V F K+ + N +GR N+R+ I I
Sbjct: 191 GMQSDKIQVASFGEKHHVADNSNILGRIQNRRVVISI 227
>gi|85705706|ref|ZP_01036803.1| OmpA domain protein [Roseovarius sp. 217]
gi|85669696|gb|EAQ24560.1| OmpA domain protein [Roseovarius sp. 217]
Length = 523
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 53/161 (32%), Gaps = 13/161 (8%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--------SFVSEV 86
+ ++ D F + G + + + V
Sbjct: 362 AGFVDQTPEEIEINAQGDRFANAIAQAGAELGLDELQRMVRVLGPLKRLTTTFRFEAGSV 421
Query: 87 FLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L+ + + +A + + + + +D G N I+ RA+ ++ +++
Sbjct: 422 RLDAQSRSNAEQLARAMELGHYDARRLVFVGFSDGDGPAGTNRDIALRRAETVRRAVVRA 481
Query: 145 G---VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + F P+ +DT GRQ N+R+E+ +
Sbjct: 482 AETANLERIKLELEAFGEAMPMACDDTAWGRQVNRRVEVWV 522
>gi|299773231|gb|ADJ38690.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 370
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 15/120 (12%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + + + +TD IG NL +SQ+RA
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRI---EIQI 182
+ + +Y++ + + ++ G+ P+ N GR ++R+ EIQ+
Sbjct: 304 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVIHPEIQV 362
>gi|253578401|ref|ZP_04855673.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850719|gb|EES78677.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 310
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 19/167 (11%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKK 91
+ ++ G D E Q + + V + +V F + L +
Sbjct: 115 ATQQKKIDNIIGVKADVIE-ALQKEFSKNNVSVDIDAQTGALTLNANVLFDYDKSELTDE 173
Query: 92 FLPMLQLI----ATIL--NKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L I +L + I I +TD+ G NL +SQ+R+ + YL +
Sbjct: 174 GKQELADILPIYCKVLLQKDYKKYLAEIIIDGYTDTDGDYDYNLELSQKRSLAVAQYLTE 233
Query: 144 RGVSS---------NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ +++V G P+ +D V + ++R+E++
Sbjct: 234 IRENFLSSDEISELQNYLTVNGHGSANPVLDSDGNVDKDASRRVEVK 280
>gi|229588064|ref|YP_002870183.1| flagellar motor protein MotB [Pseudomonas fluorescens SBW25]
gi|229359930|emb|CAY46784.1| chemotaxis MotB protein [Pseudomonas fluorescens SBW25]
Length = 339
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 11/133 (8%)
Query: 61 TGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
I D + I + L+ F +L +A + P+ I+I H
Sbjct: 143 DQISFEITPDGLRIQITDAANRPMFDSGSARLKPYFEDILLAMADTIKAVPN-KISISGH 201
Query: 117 TDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
TD+ N +S RA+ + L+ + V GFA + +
Sbjct: 202 TDAKPYAGQGDFGNWELSANRANAARRALVAGSYPDPQVARVVGFASSQ-LFDHKDPFN- 259
Query: 173 QNNQRIEIQIFPR 185
N+RI+I + +
Sbjct: 260 PINRRIDIVVLTK 272
>gi|237707997|ref|ZP_04538478.1| major outer membrane protein OmpA [Bacteroides sp. 9_1_42FAA]
gi|265754217|ref|ZP_06089406.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_33FAA]
gi|229457983|gb|EEO63704.1| major outer membrane protein OmpA [Bacteroides sp. 9_1_42FAA]
gi|263234926|gb|EEZ20481.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_33FAA]
Length = 395
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 49/137 (35%), Gaps = 11/137 (8%)
Query: 49 KAEDEFQMQLQDTGIVVSRIG---DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
+ + + QL + V + I + L LQ IA ++
Sbjct: 264 EQNRQLKAQLANQPTEVVTEQVTVNQIAPAPQSVFFQIGSAVLPTNSTVNLQQIADLVKD 323
Query: 106 FPSTVIAIQSHTDSI-GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P + + + DS G+ N +S++RA+ + + L+ + + + + G +
Sbjct: 324 NPGLKLKVTGYADSDTGSAAWNKQLSEDRANNVANELV-KLGVNKNNLIISGMGGVNTLT 382
Query: 165 TNDTKVGRQNNQRIEIQ 181
N+R+ I+
Sbjct: 383 PP------AFNRRVIIE 393
>gi|226197157|ref|ZP_03792734.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|225930536|gb|EEH26546.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
Length = 254
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 13/122 (10%)
Query: 73 TCYIPVHVSFVSEV----FLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNN 126
+P F + + L + + F + + +TD +G+ ++N
Sbjct: 131 RVELPTDTLFAFDKGGFEDISADGRRQLGDLVASIKAKIFSINHLIVTGYTDRLGSDEHN 190
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEI 180
+S ERA + Y+I I+ G P+ + Q N+R+EI
Sbjct: 191 ARLSSERARTVADYMIAE-GIPAAKITAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEI 249
Query: 181 QI 182
+I
Sbjct: 250 RI 251
>gi|296329419|ref|ZP_06871912.1| outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296153464|gb|EFG94289.1| outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 153
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ +L I + + + I I HTDSIG+ N +S+
Sbjct: 62 IVLDERSLNFDFDKSNVKPQYYDLLNNIKEFVEQN-NYEITIVGHTDSIGSNAYNFKLSR 120
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
RA+ +K+ L++ G+S +R + + + PI
Sbjct: 121 RRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIA 153
>gi|254293721|ref|YP_003059744.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
gi|254042252|gb|ACT59047.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
Length = 303
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 72/188 (38%), Gaps = 19/188 (10%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSR 67
+G K K + I R + ++AE + +QD +V+ +
Sbjct: 113 AGTPSNETNKSKEVSQSAMSKAIAM-REQAEFERAEQSLRQAMQDMPDLAALSKHLVIDQ 171
Query: 68 IGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + I + + + +L ++ ++ K P+ ++I HT + T
Sbjct: 172 TPEGMRIQIVDQEGRAMFAAASAKPLPRAEKILAAVSQVIMKLPN-RVSISGHTGDLPTG 230
Query: 124 ---KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+N +S +RA+ +S L G+ ++R V G A P+ +D N+RI I
Sbjct: 231 VEGYSNWQLSSDRANSARSILESSGLDADRIYQVSGKAGSEPLYPDDPD--LPGNRRISI 288
Query: 181 QIFPRGNI 188
+ +
Sbjct: 289 VLLRESPV 296
>gi|300722575|ref|YP_003711865.1| outer membrane protein 3a [Xenorhabdus nematophila ATCC 19061]
gi|218157851|gb|ACK58677.1| OpnT [Xenorhabdus nematophila]
gi|297629082|emb|CBJ89667.1| outer membrane protein 3a (II*;G;d) [Xenorhabdus nematophila ATCC
19061]
Length = 369
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 20/128 (15%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + L K T + + +TD IG+ NL +S +RA
Sbjct: 240 SDVLFNFNKSTLKPEGQQELDNLYNQLAKIDPTQGNVVVIGYTDRIGSQNFNLPLSHKRA 299
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI----DTN---DTK--VGRQNNQRI------- 178
+ YL+ + I G + P+ N TK ++R+
Sbjct: 300 QSVVDYLVAK-GIPANSIQAEGRGKESPVTGSTCDNIKVRTKLIDCLAPDRRVIINIQGT 358
Query: 179 -EIQIFPR 185
E+ I P+
Sbjct: 359 KEVIIQPK 366
>gi|224458593|gb|ACN43175.1| major outer membrane protein OmpAI [Aeromonas veronii]
Length = 327
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 46/118 (38%), Gaps = 12/118 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + + L + + + +TD IG+ NL +S+ RA
Sbjct: 209 SDVLFAFGKSTLKPEGVAALNTLYQQVVDVQPKDGSAVVVGYTDRIGSDAYNLKLSEARA 268
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGRQN-------NQRIEIQIF 183
+ +L+ + +++ G P+ ++ G+ ++R+E+++
Sbjct: 269 RTVADFLVGK-GLPAGKVAIEGRGEANPVTGTQCNSVKGKAQLISCLAPDRRVEVRVT 325
>gi|313141840|ref|ZP_07804033.1| OmpA/MotB [Helicobacter canadensis MIT 98-5491]
gi|313130871|gb|EFR48488.1| OmpA/MotB [Helicobacter canadensis MIT 98-5491]
Length = 263
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 61/163 (37%), Gaps = 10/163 (6%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVHVSFVSEVFLEKK 91
+ D + + + E + ++ VV G + + F E +
Sbjct: 67 TTDPETAEQIIKVQSEILEFKEDARVSLGPSVVEDDGKEGFILRFHGRLLFDEEKTAIEN 126
Query: 92 FLPML--QLIATILNKFPST-VIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQ 143
+L + +A IL K P T + I + D++ +++L +S RA + LI+
Sbjct: 127 ADEILFLKRLALILQKMPQTMHLDIIGYADNVEGKPNLKYQDSLGLSALRASNVAKILIE 186
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ + I+ G + N R N+R+E +P+
Sbjct: 187 NQ-VNPQKITSLGGGATNFLLPNTNAENRAQNRRVEFHFYPQD 228
>gi|226327780|ref|ZP_03803298.1| hypothetical protein PROPEN_01653 [Proteus penneri ATCC 35198]
gi|225203484|gb|EEG85838.1| hypothetical protein PROPEN_01653 [Proteus penneri ATCC 35198]
Length = 350
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 8/125 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
I + V +E +L IA ILN P I++ HTD I +
Sbjct: 148 QIIDKANRPMFRVGSATVEPYMKDILTAIAPILNDTP-YKISLSGHTDDIPYASGAFKYS 206
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + LI G++ + + V G A + D N+RI I + +
Sbjct: 207 NWELSTDRANASRRELIGAGLNEWKVLRVVGMASTVHLVKEDGFA--AANRRISILVLTK 264
Query: 186 GNIKK 190
+K
Sbjct: 265 QAEQK 269
>gi|75907103|ref|YP_321399.1| OmpA/MotB protein [Anabaena variabilis ATCC 29413]
gi|75700828|gb|ABA20504.1| OmpA/MotB [Anabaena variabilis ATCC 29413]
Length = 597
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 9/118 (7%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--------PSTVIAIQSHTDSIGTLKN 125
+ + L L +A + K I I HT++ GT
Sbjct: 473 IERAIVFFPEGSQEIIPSELSKLNNLALAVKKLLAVAKYLEKDVYIQIIGHTNTTGTESR 532
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S+ R+ + SYL + S + V G + P+ T G++ N+R+ ++
Sbjct: 533 NAQLSEGRSQRVLSYLSSQ-GISTSQLQVLGVSSSQPLQPELTDEGKKFNRRVSFKVI 589
>gi|187919311|ref|YP_001888342.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans
PsJN]
gi|187717749|gb|ACD18972.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 222
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 58/169 (34%), Gaps = 7/169 (4%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ +F+ + + K L + T+ +S + + I
Sbjct: 40 TLMVLFLALYVLQLAKTRELEIK-ALERHVVTEAAPATPDASKKQLLSLLAPLRDNRQIT 98
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT- 122
+S + I + F + L + +L IA +L + I ++ HTD++
Sbjct: 99 ISNAAQGVEIAINAKILFNSGDARLLPESSDVLNQIAGVLRERSKNNILVEGHTDNVPIS 158
Query: 123 ---LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
++N +S RA + + + ++ G A +P+ D
Sbjct: 159 TAKYESNWELSSARAGAVVRFFADK-GIEAHRMAAIGRADNFPLIIGDD 206
>gi|217976235|ref|YP_002360382.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
gi|217501611|gb|ACK49020.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
Length = 402
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 56/176 (31%), Gaps = 13/176 (7%)
Query: 16 SGCGLASREKKKVFLHKSNDT-DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC 74
+G G + + S D + L + I V + +
Sbjct: 226 AGKGTKTGDAATEAAMASAQPMDTETASLKAGLTALAPQKGRFGDGPRIEVENTDEGLLI 285
Query: 75 YIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNL 127
+ + + + + + I +L + ++ HTD+ +N
Sbjct: 286 SLTDDRKFSMFAIGSAAPLPQTIEAMAKIGDLLKTRSGM-VVVRGHTDARPFKSATYDNW 344
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP-IDTNDTKVGRQNNQRIEIQI 182
+S RA + + L + G+ R + GFA + T N+RIEI +
Sbjct: 345 RLSTARAHMAQYMLTRGGLDEKRIEKIEGFADHRLKVAAEPTA---AANRRIEILL 397
>gi|114320660|ref|YP_742343.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227054|gb|ABI56853.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 285
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 65/174 (37%), Gaps = 12/174 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-DTGIVVSRIGDMITCYIP 77
G + + ++ + S L++A +E + + +++ D + +
Sbjct: 96 GETPTPMDQQRDEGAWISEGAMRDLLSELERALEEKEELAEFRDQVLMDMTPDGLRIQLV 155
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLI 129
+ + L +L + +L + P+ + I HTD+ N +
Sbjct: 156 DAENRPMFDLGSARLRSYAAEILSGLTGVLERVPNA-LRISGHTDARPFVGRRDYTNWEL 214
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S +RA+ + L G++ R V G A P+D ++ N+RI I +
Sbjct: 215 STDRANAARRTLTASGIAPYRVAQVVGVAETQPLDPDNPMA--PVNRRISIILL 266
>gi|332161302|ref|YP_004297879.1| flagellar motor protein MotB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665532|gb|ADZ42176.1| flagellar motor protein MotB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 409
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 72/203 (35%), Gaps = 31/203 (15%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKR-----------FGSSLDKAEDEFQMQLQDT 61
+S +S + + T V + L+K ++ ++
Sbjct: 69 VALSSGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDSEESRKEEYRLNKLREKLDQLIESD 128
Query: 62 G--------IVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPST 109
++++ + + + I + + +E +L+ IA ILN P+
Sbjct: 129 PRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPN- 187
Query: 110 VIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I++ HTD + +N +S +RA+ + L+ G+ + + V G A +
Sbjct: 188 KISLSGHTDDLPYASGERGYSNWELSADRANASRRELLAGGLDEGKVLRVVGMASTMRLK 247
Query: 165 TNDTKVGRQNNQRIEIQIFPRGN 187
+ N+RI I + +
Sbjct: 248 EQASDD--PVNRRISILVLNKQT 268
>gi|114562800|ref|YP_750313.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114334093|gb|ABI71475.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 255
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ Q L + + + + +T + V +E F L +A +++ P I
Sbjct: 118 QLQSNLAEQKVNQQQTLNELTIGMNVQ-FKTGLSHIEPLFEQQLDNVAYMMSLSPELTID 176
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+ + D G N +S++R + YL+ +G++ R + + + P+
Sbjct: 177 LTGYADRRGDNDFNQALSEQRLAEVTQYLVTQGIARER-LHGQAYGSTLPMHQEQNFEND 235
Query: 173 QNNQRIEIQIFPRG 186
++R+ +++ G
Sbjct: 236 FFDRRVTLKLLAPG 249
>gi|296158506|ref|ZP_06841336.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295891074|gb|EFG70862.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 372
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 12/150 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE---KKFLPMLQ 97
+ + + L L
Sbjct: 195 DGVEKGMPGVAAALEACTPPPVAAPAAPIPQKMTLQADATFRFDRGDLAGMLPAGKAKLD 254
Query: 98 LIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ L + T I I +TD +G+ N +S +RA+ +K YL GVS+ IS RG
Sbjct: 255 ELVRNLKQVDDVTSIRIDGYTDRLGSDSYNRQLSAKRAETVKRYLQSGGVSAP--ISARG 312
Query: 157 FAYKYPIDTNDTKVGRQN------NQRIEI 180
+ P+ + + N+R+E+
Sbjct: 313 RGKEDPVVQCNDRNHEALIACLGPNRRVEL 342
>gi|150003007|ref|YP_001297751.1| major outer membrane protein OmpA [Bacteroides vulgatus ATCC 8482]
gi|319642207|ref|ZP_07996867.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_40A]
gi|149931431|gb|ABR38129.1| major outer membrane protein OmpA [Bacteroides vulgatus ATCC 8482]
gi|317386193|gb|EFV67112.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_40A]
Length = 399
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 49/137 (35%), Gaps = 11/137 (8%)
Query: 49 KAEDEFQMQLQDTGIVVSRIG---DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
+ + + QL + V + I + L LQ IA ++
Sbjct: 268 EQNRQLKAQLANQPTEVVTEQVTVNQIAPAPQSVFFQIGSAVLPTNSTVNLQQIADLVKD 327
Query: 106 FPSTVIAIQSHTDSI-GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P + + + DS G+ N +S++RA+ + + L+ + + + + G +
Sbjct: 328 NPGLKLKVTGYADSDTGSAAWNKQLSEDRANNVANELV-KLGVNKNNLIISGMGGVNTLT 386
Query: 165 TNDTKVGRQNNQRIEIQ 181
N+R+ I+
Sbjct: 387 PP------AFNRRVIIE 397
>gi|123442804|ref|YP_001006781.1| flagellar motor protein MotB [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089765|emb|CAL12618.1| chemotaxis MotB protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 414
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 72/203 (35%), Gaps = 31/203 (15%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKR-----------FGSSLDKAEDEFQMQLQDT 61
+S +S + + T V + L+K ++ ++
Sbjct: 69 VALSSGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDSEESRKEEYRLNKLREKLDQLIESD 128
Query: 62 G--------IVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPST 109
++++ + + + I + + +E +L+ IA ILN P+
Sbjct: 129 PRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPN- 187
Query: 110 VIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I++ HTD + +N +S +RA+ + L+ G+ + + V G A +
Sbjct: 188 KISLSGHTDDLPYASGERGYSNWELSADRANASRRELLAGGLDEGKVLRVVGMASTMRLK 247
Query: 165 TNDTKVGRQNNQRIEIQIFPRGN 187
+ N+RI I + +
Sbjct: 248 EQASDD--PVNRRISILVLNKQT 268
>gi|13472197|ref|NP_103764.1| hypothetical protein mlr2412 [Mesorhizobium loti MAFF303099]
gi|14022942|dbj|BAB49550.1| mlr2412 [Mesorhizobium loti MAFF303099]
Length = 754
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + + L+ +A +L K P+ I+ HTD++GT + NL
Sbjct: 631 RVDLDTLNFEFGSSSISDTEVQKLEGVASAMEKLLKKNPAETFLIEGHTDAVGTPEANLA 690
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S RA+ + L ++ +G+ +Y +T+ + N+R+ I+
Sbjct: 691 LSDRRAEAVAEALTNAFGIPPENLTTQGYGEQYLKV--NTQAPNRENRRVAIR 741
>gi|257125161|ref|YP_003163275.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
gi|257049100|gb|ACV38284.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
Length = 366
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 96 LQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI-S 153
L+ IA ++N+F I HTDS G+ N +S RA + L + G+ + +
Sbjct: 265 LRAIAGVINQFADGGSIDFVGHTDSTGSDAYNQKLSVARAQNVARLLREYGLKNTISYGT 324
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ G P DTNDT GR NN+R+E+
Sbjct: 325 ITGQGESNPADTNDTTDGRYNNRRVEL 351
>gi|153877197|ref|ZP_02004126.1| Outer membrane protein A [Beggiatoa sp. PS]
gi|152066338|gb|EDN65873.1| Outer membrane protein A [Beggiatoa sp. PS]
Length = 148
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 8/109 (7%)
Query: 81 SFVSEVFLEKKFLPMLQLIAT--ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L + +L +A L I I H DS T +S RA +
Sbjct: 45 FEPGKATLTDQVKSILDTLAAKICLEIAHINAIVITGHADSSPTDNYKQKLSLARAVAVA 104
Query: 139 SYLIQRGV-SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
YL R ++ + +G A +YP+ + N+R+EI++ +
Sbjct: 105 DYLKSRCPALTDDKLITKGLADQYPLSADS-----AKNRRVEIRVMKKN 148
>gi|89902463|ref|YP_524934.1| OmpA/MotB [Rhodoferax ferrireducens T118]
gi|89347200|gb|ABD71403.1| OmpA/MotB [Rhodoferax ferrireducens T118]
Length = 314
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 71/175 (40%), Gaps = 15/175 (8%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
A ++ KK+ + + +++ + L + + +++ G+ + + D +
Sbjct: 122 AKQDAKKLAGISAKISALISG--NTKLTEFSRQIRLETTADGLQIQIVDDQ-----KRPM 174
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERAD 135
++ +L+ I LN + I++ HTDS +N +S +RA+
Sbjct: 175 FDSGSAVVKPYMRDILREIGGALNGVEN-KISLDGHTDSSPYSSAQRGYSNWELSSDRAN 233
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ L+ G+ ++ V G A +D + G N+RI I + R ++
Sbjct: 234 ASRRELVAAGMPDDKLARVVGLASSILLDP-ENPTG-AVNRRISITVMTREAEER 286
>gi|332534875|ref|ZP_08410697.1| outer membrane protein [Pseudoalteromonas haloplanktis ANT/505]
gi|332035674|gb|EGI72163.1| outer membrane protein [Pseudoalteromonas haloplanktis ANT/505]
Length = 243
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 52/132 (39%), Gaps = 3/132 (2%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + L + ++++ + V + F L + T+LN P
Sbjct: 101 LEQQL-EVLANQNEQLTQVQINNLLAMTVQ-FKTGSSVIAPHFALQLDQLVTLLNNQPQL 158
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ + D G + NLL+S+ R + + + + S++ +S + F + + ++T
Sbjct: 159 ALDLSGFADQRGDEQANLLLSKARVNAV-QSYLIKHGVSHKRLSTQAFGEQQTLANSNTV 217
Query: 170 VGRQNNQRIEIQ 181
++R+ +
Sbjct: 218 EDNFFDRRVTLT 229
>gi|255008700|ref|ZP_05280826.1| putative outer membrane protein [Bacteroides fragilis 3_1_12]
gi|313146435|ref|ZP_07808628.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313135202|gb|EFR52562.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 399
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 53/142 (37%), Gaps = 3/142 (2%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVV-SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+D+ D ++ + + V + + I + + + L IA
Sbjct: 244 PVVQYIDRPVDRIVERIVEKRVEVPTVVESHICDLFDNIHFAFDKDVVTSESELTLDKIA 303
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+L +P I +TD+ G N+ +S+ RA + L++R V + + RG Y
Sbjct: 304 DLLKSYPDNNFLITGYTDARGGDNYNMDLSKRRAKAVYRALLKRQVPQH-MLKWRGVGYH 362
Query: 161 YPIDTNDTKVG-RQNNQRIEIQ 181
R ++++ I+
Sbjct: 363 ASSVPASGPDKVRMGDRKVSIE 384
>gi|90579127|ref|ZP_01234937.1| hypothetical protein VAS14_05458 [Vibrio angustum S14]
gi|90439960|gb|EAS65141.1| hypothetical protein VAS14_05458 [Vibrio angustum S14]
Length = 166
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 2/111 (1%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
I + H F + L+ + + L + I I HTD G+ N
Sbjct: 50 EEDKKIYLSLISHFDF-DKAVLKPEDIKELDDFIAKIQLLSG-DILIAGHTDYQGSDSYN 107
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+S R+ VI+ YL R S+ V+ F K PI + N+R
Sbjct: 108 EALSLRRSHVIERYLKARIDESHYHFEVKYFGEKNPIVKGHSLKANALNRR 158
>gi|15964427|ref|NP_384780.1| flagellar motor protein MotB [Sinorhizobium meliloti 1021]
gi|307311569|ref|ZP_07591210.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
gi|15073604|emb|CAC45246.1| Chemotaxis (motility protein B) transmembrane [Sinorhizobium
meliloti 1021]
gi|306899586|gb|EFN30215.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
Length = 394
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 65/181 (35%), Gaps = 17/181 (9%)
Query: 16 SGCGLASREKKKVFLHKSN-DTDIVNKRFGSSLDKAEDEFQMQLQDT------GIVVSRI 68
+ G +K + + + + + E + +L G+ V+
Sbjct: 212 AASGPGVPDKAEGAKAADAPENQAPAENPQKEAEALKAEIEKELGGGAGRLLEGLAVTPA 271
Query: 69 GDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ I + V +K+ + ++ I +L + P +A++ HTD
Sbjct: 272 EGGLLVTISEQTDAPMFAVGSAVPQKELVLAMEKIGRLLAERPGA-VAVRGHTDGRPFKD 330
Query: 125 ---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+N +S RA L++ G+ R + GFA + ND N+RIEI
Sbjct: 331 GTYDNWRLSAARAQSAYYMLVRGGLEEERVKQISGFADRRLQVPNDAYA--PANRRIEIL 388
Query: 182 I 182
+
Sbjct: 389 L 389
>gi|257093018|ref|YP_003166659.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045542|gb|ACV34730.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 566
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 38/120 (31%), Gaps = 11/120 (9%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQ-LIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ I L K+ + + + + +TDS G+ + N
Sbjct: 441 EAIVTKPVTVGFPSGSAELSKRAEKTVDSEMVPFIENNGKAYFEVSGNTDSTGSREVNQR 500
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--------KVGRQNNQ--RI 178
+S RA + YL+++ + G+ P+ + R N+ R+
Sbjct: 501 LSAARARAVVDYLVKQWEFPRERFKIVGYGPDRPLCNEVNAAIEGLSLEDCRAINRTTRV 560
>gi|24212922|ref|NP_710403.1| OmpA family lipoprotein [Leptospira interrogans serovar Lai str.
56601]
gi|24193591|gb|AAN47421.1| OmpA family lipoprotein [Leptospira interrogans serovar Lai str.
56601]
Length = 195
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 74/194 (38%), Gaps = 20/194 (10%)
Query: 1 MIKELG-LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K++ L + S +S EKK+ T + ++D E
Sbjct: 1 MVKKILNLILLGAIAFSFTLCSSAEKKEESAAPEPSTQEQSAAANRNVDVNSPEAIADSL 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEK-KFLPMLQLIA----TILNKFPS-TVIAI 113
+ + R D +T + + F + A L K P + I
Sbjct: 61 NEKLKDFRYPDGLT----RPGFSYKKADVTPGDFSEWSKTNAPVIKEGLRKLPDSYALEI 116
Query: 114 QSHTDSIGTLKN------NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
HTD+IG + N+ S+ RA+ +K LI++G+ +NR ++ +G P+ D
Sbjct: 117 TGHTDAIGPEQAEGAKKGNIFYSELRANAVKQALIKQGIPANRIVT-KGAGSSEPVSGLD 175
Query: 168 TKVGRQNNQRIEIQ 181
K N+R+ +
Sbjct: 176 AKD--AKNRRVTFR 187
>gi|300928437|ref|ZP_07143969.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300463554|gb|EFK27047.1| conserved hypothetical protein [Escherichia coli MS 187-1]
Length = 235
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 68/208 (32%), Gaps = 21/208 (10%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ +L + ++ + + K N + + + EF L+D
Sbjct: 22 MSDLMAGLMMVFMFISIAYMHYVRIEKEKIKEVAVAYENAQLQLY-NALDIEFAKDLKDW 80
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPS--TVIAIQS 115
+ + + P + + L+ KF +L +L+ + T + I+
Sbjct: 81 DAEIDKQTLEVRFKSPDVLFGLGSTELKPKFKLILDDFFPRYLKVLDNYQEHITEVRIEG 140
Query: 116 HTDSIGT--------LKNNLLISQERADVIKSY------LIQRGVSSNRFISVRGFAYKY 161
HT + T NN+ +SQ R + Y + + G++ +
Sbjct: 141 HTSTDWTGTTNPDIAYFNNMALSQGRTRAVLQYVYDIKNIATHQQWVKSKFAAVGYSSAH 200
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
PI K ++R+ ++ ++
Sbjct: 201 PILDKTGKEDPNRSRRVTFKVVTNAELQ 228
>gi|251733453|emb|CAR82476.1| pal [Rhizobium gallicum]
Length = 87
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L ++P+ I ++ H D GT + NL + RA K YL
Sbjct: 2 DSTSIRADAAQTLDRQAQWLARYPNYAITVEGHADERGTREYNLALGARRAAATKDYLSS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RGV + R ++ + + P+ D
Sbjct: 62 RGVPAQRMKTIS-YGKERPVAVCDD 85
>gi|212690547|ref|ZP_03298675.1| hypothetical protein BACDOR_00029 [Bacteroides dorei DSM 17855]
gi|254883655|ref|ZP_05256365.1| major outer membrane protein OmpA [Bacteroides sp. 4_3_47FAA]
gi|294775642|ref|ZP_06741150.1| OmpA family protein [Bacteroides vulgatus PC510]
gi|212666896|gb|EEB27468.1| hypothetical protein BACDOR_00029 [Bacteroides dorei DSM 17855]
gi|254836448|gb|EET16757.1| major outer membrane protein OmpA [Bacteroides sp. 4_3_47FAA]
gi|294450486|gb|EFG18978.1| OmpA family protein [Bacteroides vulgatus PC510]
Length = 401
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 49/137 (35%), Gaps = 11/137 (8%)
Query: 49 KAEDEFQMQLQDTGIVVSRIG---DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
+ + + QL + V + I + L LQ IA ++
Sbjct: 270 EQNRQLKAQLANQPTEVVTEQVTVNQIAPAPQSVFFQIGSAVLPTNSTVNLQQIADLVKD 329
Query: 106 FPSTVIAIQSHTDSI-GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P + + + DS G+ N +S++RA+ + + L+ + + + + G +
Sbjct: 330 NPGLKLKVTGYADSDTGSAAWNKQLSEDRANNVANELV-KLGVNKNNLIISGMGGVNTLT 388
Query: 165 TNDTKVGRQNNQRIEIQ 181
N+R+ I+
Sbjct: 389 PP------AFNRRVIIE 399
>gi|303252130|ref|ZP_07338298.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307247466|ref|ZP_07529511.1| hypothetical protein appser2_4620 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302648913|gb|EFL79101.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306855969|gb|EFM88127.1| hypothetical protein appser2_4620 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 283
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
L K ++ +A L + + + +TD +G+ K NL +SQ RA+++K+ L+Q+GV
Sbjct: 151 TLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRLGSEKYNLDLSQRRANMVKARLVQQGV 210
Query: 147 SSNRFISVRGFAYKYPIDTNDT-------KVGRQNNQRIEIQ 181
++N I+ G+ + D K + N+R+E+
Sbjct: 211 TAN--INAVGYGKAQQVKACDGIPHGQELKDCLRPNRRVEVT 250
>gi|189911990|ref|YP_001963545.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167776666|gb|ABZ94967.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
Length = 159
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 80 VSFVSEVFLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ F + L K L LQ +A LN+ + I I +H + N++IS++R+ ++
Sbjct: 55 IYFAKKSNLIPKPDLVRLQTVADFLNRNRNYEIHIDAHAVEGKNNEENIMISEKRSLEVE 114
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+L+ I + N TK N+R+EIQ+ P
Sbjct: 115 RFLLIHF-VEPNQIRRLFYGNTK--SPNQTKEHEALNRRVEIQLHP 157
>gi|138894940|ref|YP_001125393.1| putative periplasmic protein [Geobacillus thermodenitrificans
NG80-2]
gi|196248493|ref|ZP_03147194.1| OmpA/MotB domain protein [Geobacillus sp. G11MC16]
gi|134266453|gb|ABO66648.1| Putative periplasmic protein [Geobacillus thermodenitrificans
NG80-2]
gi|196212218|gb|EDY06976.1| OmpA/MotB domain protein [Geobacillus sp. G11MC16]
Length = 223
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 51/145 (35%), Gaps = 16/145 (11%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQL-IATILN------ 104
+ + + + P + F + + LQ I +
Sbjct: 61 ALTEAFKQSNMTIEIDQQTGAIRFPGSILFESDSAEISPEGKKFLQQFIPKYMGILLQDR 120
Query: 105 -KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS-------NRFISVRG 156
+ + I I+ HTD GT N+ +SQ RA + Y+ + + ++I+ G
Sbjct: 121 FQNEISSIIIEGHTDRNGTYMYNMSLSQRRAYAVLEYIYSKEFPNFKERELSKKYITANG 180
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ P+ + K ++R+E
Sbjct: 181 RSFSSPLTDENGKYDPDRSRRVEFL 205
>gi|84514866|ref|ZP_01002229.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
gi|84511025|gb|EAQ07479.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
Length = 531
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 60/140 (42%), Gaps = 10/140 (7%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--K 105
D E + T ++ + IT + L+ + + +A ++
Sbjct: 389 DDVEVTLRQLRDMTQLLTAADRSSITFR-----FALGSSRLDARAQDDILRLANLIATSD 443
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY---LIQRGVSSNRFISVRGFAYKYP 162
+ + + +TD+IG +NL +SQ+RA+ ++ + S + + GF P
Sbjct: 444 ISNKELLLIGYTDAIGDGASNLALSQQRAEEVRQALFAVAPSLASDDLPVRALGFGEISP 503
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
+ N+T GR+ N+R+E+ +
Sbjct: 504 LSCNETANGRRINRRVEVWL 523
>gi|311695399|gb|ADP98272.1| OmpA/MotB domain protein [marine bacterium HP15]
Length = 246
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 60/186 (32%), Gaps = 19/186 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRI 68
E ++ + ++ + + E + Q++ I ++
Sbjct: 13 ASPDIESSQIQIEDEVVDELSETLEQRRMQELFQELKEQIKQDETLQEFKDQLLIDITDE 72
Query: 69 GDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL--- 123
G I + L+ +L +A L + ++I HTDS
Sbjct: 73 GLRIQIVDRSGRPMFDSGRAELKYYSQDILFELAKTLGSVNN-KLSITGHTDSTPFSGRP 131
Query: 124 -KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S +RA+ + L+ GV + V G + D D N+RI I +
Sbjct: 132 GYTNWELSADRANTARRALVAGGVRQQQIARVVGLSDSVLFDKEDPNA--PVNRRISIIV 189
Query: 183 FPRGNI 188
+ +
Sbjct: 190 LNKKTV 195
>gi|262173363|ref|ZP_06041040.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451]
gi|261890721|gb|EEY36708.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451]
Length = 315
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 56/172 (32%), Gaps = 22/172 (12%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDE----------FQMQLQDTGIVVSRIGDMITCYIPVHV 80
D N + + E + V+ + +
Sbjct: 107 QGDGDGPESNSLIDGNFETQEQLTLLAKVVKKVIGQVSAQGNVNVTVTPQGLRIVLQDDY 166
Query: 81 ----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN-----NLLISQ 131
L F +L +A + + + I I HTDSI K N +S
Sbjct: 167 KQFMFSRGGSELTPFFEDLLLALAPVFQRVAN-PIIISGHTDSIPFRKKISKTSNWELSA 225
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+V + L+ G+ + R + V G + + + N T N+RIE+ +
Sbjct: 226 SRANVARKTLVDGGMPAERVLQVTGMSDRALL--NQTAPDSSENRRIELFVL 275
>gi|220921336|ref|YP_002496637.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219945942|gb|ACL56334.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
Length = 178
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 54/181 (29%), Gaps = 11/181 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ +S+ + + C + + + L K +
Sbjct: 1 MRGKITVSVLALAAV--CVGTAAIAGPAYTAEDIVRKFAPAD---PLGKTRGLCVGTHSE 55
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTD 118
V + V + L L A L S ++ HTD
Sbjct: 56 CNTNVDSRSKAAGAFDLVVNFEYNSDALTPAAKQNLDEFAKALQDARLRSASFVVEGHTD 115
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ G + NL +S RAD + + ++ RGF P+ + N+R+
Sbjct: 116 ARGGEEFNLGLSTRRADAVVK-YLSGRGVPQGQLTARGFGKSRPLTDDPLD---PANRRV 171
Query: 179 E 179
E
Sbjct: 172 E 172
>gi|298369983|ref|ZP_06981299.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281443|gb|EFI22932.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 227
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 22/159 (13%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATIL 103
+ DK + + T + F + L + L +A L
Sbjct: 32 TYFDKETQGRIECGDAVAVEQAPEYAEETVSLSAKTLFGFDKDILRPEAKESLNALAQRL 91
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + ++ HTD +G+ + N +S+ RA+V+ +YL+ + ++ IS G
Sbjct: 92 SNSNVESVRVEGHTDFMGSEQYNQALSERRANVVANYLVNQ-GVASNKISAVGLGESQAQ 150
Query: 164 DTNDTKVG-------------RQN-------NQRIEIQI 182
T + R ++R++++I
Sbjct: 151 MTGTCEAEVANLGKKVSKAKRRAALIACIEPDRRVDVKI 189
>gi|301060006|ref|ZP_07200880.1| OmpA family protein [delta proteobacterium NaphS2]
gi|300445885|gb|EFK09776.1| OmpA family protein [delta proteobacterium NaphS2]
Length = 218
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/215 (11%), Positives = 58/215 (26%), Gaps = 45/215 (20%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI------------------------ 38
K + + + ++ ++ C
Sbjct: 12 KMVAVGIMVLFVLAACSGGGFSNMTDTEKGGILGGAGGAALGAIIYHGNPLAGAVIGAAA 71
Query: 39 ---VNKRFGSSLD----KAEDEFQMQLQDTGIVVSRIGDMITCYIP--VHVSFVSEVFLE 89
G +D Q+ + + + + ++
Sbjct: 72 GVLTGGVVGHFMDDRKKDLTKALAPQINAGEVTLQVLKGNVILVTQTGETAFAPGSSVVK 131
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ F+ +Q +A I+ + + I H D GT ++ +RA+ +++ + S
Sbjct: 132 QDFISTIQTVANIMKTYGKMTVDIIGHPDRTGTKTERQTLADQRAEAVRTMFLG-MGISP 190
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ G A +D R+E+ I P
Sbjct: 191 ALVRSSGNANSQYLDG-----------RVELVITP 214
>gi|218961922|ref|YP_001741697.1| hypothetical protein CLOAM1655 [Candidatus Cloacamonas
acidaminovorans]
gi|167730579|emb|CAO81491.1| hypothetical protein CLOAM1655 [Candidatus Cloacamonas
acidaminovorans]
Length = 201
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 44/135 (32%), Gaps = 11/135 (8%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF-------PSTVIAIQSHTDS 119
+ + + L+ LP ++ L + I I+ HTD+
Sbjct: 63 NQENNEIIIPADILFEFDKSELKSDNLPKIRQFRKKLKNYMQVGDRKKRYCIIIEGHTDT 122
Query: 120 IGTLKNNLLISQERADVIKSYLI--QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+G N +S +R+ + + + F + N+R
Sbjct: 123 VGDKNYNYKLSLDRSLSLIKEFKEDDFFRDPDIDLIPAAFGESKLAVPTPDNTINKKNRR 182
Query: 178 IEIQIFPR--GNIKK 190
+ I+I P+ G +++
Sbjct: 183 VVIRIVPKFIGTMQQ 197
>gi|284007554|emb|CBA73076.1| outer membrane protein A [Arsenophonus nasoniae]
Length = 353
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ L + + L T + + +TD IG+ N +SQ+RA
Sbjct: 228 SDVLFEFNKHTLKPAGKVELDKLYSELTNLDPTQGRVMVLGYTDRIGSPSYNKPLSQKRA 287
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ SYLI + IS +G + P+ T + R ++R+EI+I
Sbjct: 288 HEVMSYLISK-GIPANAISSQGRGEENPVTGSTCNNVKPRAALINCLAPDRRVEIEI 343
>gi|157147077|ref|YP_001454396.1| hypothetical protein CKO_02854 [Citrobacter koseri ATCC BAA-895]
gi|157084282|gb|ABV13960.1| hypothetical protein CKO_02854 [Citrobacter koseri ATCC BAA-895]
Length = 315
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 63/176 (35%), Gaps = 18/176 (10%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ---------MQLQDTGIVVSRIGDMIT 73
+ +K ++ T+ ++ S ++ ED + + + + G I
Sbjct: 112 TDAEKQVAQQAKQTESLDDVNARSRNEIEDLARIIMKITSTYDAQANLKMEIVPQGLRIL 171
Query: 74 CYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NL 127
+ S L F +L A LNK I I HTD+ N
Sbjct: 172 VSDDQKREMFQRSSAILTPFFKRLLTEFAPELNKI-DNKIIITGHTDATRFRDQVLYNNW 230
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S ERA ++ L G+ ++ + V G A + +D N+RIEI +
Sbjct: 231 NLSGERAMQARAVLTTGGLDQSKILQVSGMADQMLLDPQHPLS--SANRRIEIMVL 284
>gi|238919302|ref|YP_002932817.1| outer membrane protein A [Edwardsiella ictaluri 93-146]
gi|238868871|gb|ACR68582.1| outer membrane protein A [Edwardsiella ictaluri 93-146]
Length = 353
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ + NL +S++RA
Sbjct: 226 SDVLFNFNKFTLKAEGRQALDQLYSQLSSMDPKEGSVVVLGYTDRIGSDQYNLKLSKQRA 285
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ YL+ + I+ RG P+ T D R ++R+ I++
Sbjct: 286 QTVVDYLVSK-GIPANKIAARGMGKADPVTGSTCDNVKPRASLINCLAPDRRVVIEV 341
>gi|237725269|ref|ZP_04555750.1| major outer membrane protein OmpA [Bacteroides sp. D4]
gi|229436535|gb|EEO46612.1| major outer membrane protein OmpA [Bacteroides dorei 5_1_36/D4]
Length = 395
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 49/137 (35%), Gaps = 11/137 (8%)
Query: 49 KAEDEFQMQLQDTGIVVSRIG---DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
+ + + QL + V + I + L LQ IA ++
Sbjct: 264 EQNRQLKAQLANQSTEVVTEQVTVNQIAPAPQSVFFQIGSAVLPTNSTVNLQQIADLVKD 323
Query: 106 FPSTVIAIQSHTDSI-GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
P + + + DS G+ N +S++RA+ + + L+ + + + + G +
Sbjct: 324 NPGLKLKVTGYADSDTGSAAWNKQLSEDRANNVANELV-KLGVNKNNLIISGMGGVNTLT 382
Query: 165 TNDTKVGRQNNQRIEIQ 181
N+R+ I+
Sbjct: 383 PP------AFNRRVIIE 393
>gi|126732885|ref|ZP_01748676.1| OmpA domain protein [Sagittula stellata E-37]
gi|126706661|gb|EBA05735.1| OmpA domain protein [Sagittula stellata E-37]
Length = 518
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 64/173 (36%), Gaps = 11/173 (6%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSL--DKAEDE-FQMQLQDTGIVVSRIGDMITCYIP 77
+ ++ + ++ D + + L D+ + Q + + R+ +
Sbjct: 345 TRSPQAQIVIRRAGFVDQAAEEISADLQGDRLSNAILTAQGANGLATLQRLTGTLAPMRR 404
Query: 78 ---VHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQE 132
L+ + + +A L ++ + +D G NL I++
Sbjct: 405 LTTSFRFETGSSRLDAQSRSNVLQLAHDLEAGRYDGRKLLFVGFSDGAGPADANLAIARR 464
Query: 133 RADVIK---SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ +K + ++ +++ F P+ +DT GRQ N+R+E+ +
Sbjct: 465 RAEAVKSAVEVTAETADLTSFELALDAFGEAMPMACDDTSWGRQVNRRVEVWV 517
>gi|325474220|gb|EGC77408.1| OmpA family protein [Treponema denticola F0402]
Length = 167
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 48/143 (33%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
K+ + E + ++ ++ ++ +L+
Sbjct: 21 SAPKQKEEKPAEPEKTQEQEVVKEETDKKANEKNMSDDYYTVYFAPQSYQTDQFTAQILK 80
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
I L I I H+ + + K+ I+ +RA + SY + + I V G
Sbjct: 81 EIGEDLKAKNVKKIVIYGHSAKLDSQKDEDRIALQRAIAVASYFQKMKLFDANNIIVEGK 140
Query: 158 AYKYPIDTNDTKVGRQNNQRIEI 180
+ P ++ R N+R+EI
Sbjct: 141 GAREPARSHSEITDRFKNRRVEI 163
>gi|76812099|ref|YP_333598.1| ompA family protein [Burkholderia pseudomallei 1710b]
gi|76581552|gb|ABA51027.1| ompA family protein [Burkholderia pseudomallei 1710b]
Length = 290
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 73 TCYIPVHVSFVSEV----FLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNN 126
+P F + + L + + + + +TD +G+ ++N
Sbjct: 167 RVELPTDTLFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLVVTGYTDRLGSDEHN 226
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEI 180
+S ERA + Y+I I+ G P+ + Q N+R+EI
Sbjct: 227 ARLSSERARTVADYMIAE-GIPAAKITAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEI 285
Query: 181 QI 182
+I
Sbjct: 286 RI 287
>gi|75677209|ref|YP_319630.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
gi|74422079|gb|ABA06278.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
Length = 213
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 64/195 (32%), Gaps = 18/195 (9%)
Query: 3 KELGLSMFIMTTISGCG----LASREKKKVFLHK----------SNDTDIVNKRFGSSLD 48
K LG ++ + ++ A + + ++ ++ + +
Sbjct: 9 KSLGAAILAASLMAIAAPQGVSADDLSAQQIIDGLKVSKTRSLSASPRPTLDPNDLNFVQ 68
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KF 106
K + + ++ I + + P L + L +
Sbjct: 69 KVRGKTRSLSMGDRSQLAEIAAKRPKIDLDINFDFDSAAVTPRTEPQLHSLGKALTSDEL 128
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+VI + HTD G+ N +S+ RA+ +K +L++ + G+ + +
Sbjct: 129 AGSVIMLGGHTDGKGSDAYNQNLSERRAEAVKRFLVETYKIPAANLVAAGYGKEGYKNPA 188
Query: 167 DTKVGRQNNQRIEIQ 181
D N+R+E+
Sbjct: 189 DPFA--AENRRVEVV 201
>gi|297560201|ref|YP_003679175.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844649|gb|ADH66669.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 1124
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 52/162 (32%), Gaps = 18/162 (11%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ T + G A + + R V V
Sbjct: 111 TAFADTVTTQEDREADGQQDADAPPAPEEAPSAQPVERVRT---------VSGFGVGSAE 161
Query: 88 LEKKFLPMLQLIATILNKFPSTV--IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L ++ L +A +++ + T + I HTD G + N +S+ RA + +L +
Sbjct: 162 LTEQMRDDLAPVAEMIDSYGDTETPVRITGHTDPSGNAQTNQELSERRAQAVADHLDEVL 221
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI--QIFPR 185
+ V G + P + G +R E+ + P+
Sbjct: 222 GEEAPEMEVEGVGSEQPR-----EGGAAAQRRAEVAYTVVPQ 258
>gi|251733449|emb|CAR82474.1| pal [Rhizobium galegae]
Length = 87
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A L ++P I ++ H D GT + NL + RA K YL
Sbjct: 2 DSTSIRADAQQTLDRQAQWLGRYPKYAITVEGHADERGTREYNLALGARRAAAAKEYLAS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RGV +NR ++ + + P+ D
Sbjct: 62 RGVPANRMKTIS-YGKERPVAVCDD 85
>gi|307318924|ref|ZP_07598355.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
gi|306895338|gb|EFN26093.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
Length = 394
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 19/180 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED---EFQMQLQDT------GIVVSRIG 69
A K+ D + +AE E + +L G+ V+
Sbjct: 213 ASAPEVPDNAEGAKAADAPENQAPAENPQKEAEALKAEIEKELGGEAGRLLEGLAVTPAE 272
Query: 70 DMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK- 124
+ I + V +K+ + ++ I +L + P +A++ HTD
Sbjct: 273 GGLLVTISEQTDAPMFAVGSAVPQKELVLAMEKIGRLLAERPGA-VAVRGHTDGRPFKDG 331
Query: 125 --NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S RA L++ G+ R + GFA + ND N+RIEI +
Sbjct: 332 TYDNWRLSAARAQSAYYMLVRGGLEEERVKQISGFADRRLQVPNDAYA--PANRRIEILL 389
>gi|294666305|ref|ZP_06731554.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603907|gb|EFF47309.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 419
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 51/143 (35%), Gaps = 9/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
+ + Q + + V D + F V +E + ++ IA + +
Sbjct: 277 RLKQLLSAQERAGLLRVDEQADGQTRVRLSSAAMFASGGVEVEPQQRGVIAQIAAAIEQL 336
Query: 107 PSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P VI + HTD + ++N +S RA + L + + R + G P
Sbjct: 337 PGRVIVV-GHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGR-VEAIGAGDSQP 394
Query: 163 ID-TNDTKVGRQNNQRIEIQIFP 184
I R N+R+EI P
Sbjct: 395 IAQPVQLPANRARNRRVEILFQP 417
>gi|213420068|ref|ZP_03353134.1| hypothetical protein Salmonentericaenterica_20830 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 64
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ G + + G P+ N +K GR N+R+EI +
Sbjct: 19 RRCLTSGGVPAGRVHIVGKGDTVPVADNGSKAGRAKNRRVEILVV 63
>gi|149928472|ref|ZP_01916707.1| flagellar motor protein [Limnobacter sp. MED105]
gi|149822806|gb|EDM82057.1| flagellar motor protein [Limnobacter sp. MED105]
Length = 322
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 67/183 (36%), Gaps = 20/183 (10%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT--------GIVVSRIGDM 71
S +K + + + + L + + E + + + I++ +
Sbjct: 101 SGSTDKATNSSNADATAEALERAESKRLLELKGEIEGLIDASDLMKQFKNQIMLDITPEG 160
Query: 72 ITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK--- 124
+ I + L+ +L+ + +LN+ P+ + + HTD+
Sbjct: 161 LRIQIVDERNRPMFDSGSAVLKDYMKDILRNLTKLLNQVPN-KLTLSGHTDATPYAAGNK 219
Query: 125 --NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S +RA+ + + G+ ++ + V G A +D D N+RI I +
Sbjct: 220 GYSNWELSADRANASRREMTLAGMPDSKMLRVVGLASSVSLDEKDPYA--AVNRRIAIVV 277
Query: 183 FPR 185
+
Sbjct: 278 MNK 280
>gi|86136815|ref|ZP_01055393.1| OmpA domain protein [Roseobacter sp. MED193]
gi|85826139|gb|EAQ46336.1| OmpA domain protein [Roseobacter sp. MED193]
Length = 518
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 13/150 (8%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--------SFVSEVFLEKKFLPMLQ 97
S++ D + G V + + ++
Sbjct: 368 SMNAQGDRLSNAILAAGPEVKLEELQRLVKRLTGFRRLTTSFRFEAGSARPDAQSRSNIE 427
Query: 98 LIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ--RGVSSNRF-I 152
+A L + V+ +D G N I+ +RA ++ ++ S R +
Sbjct: 428 QLARALETGLYDGKVLNFVGFSDGDGAASGNRAIALKRAQGVRDAVLATAEAGSVARVDV 487
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V F P+ +D+ GRQ N+R+E+ +
Sbjct: 488 QVDAFGEALPMACDDSDWGRQVNRRVEVWV 517
>gi|119387029|ref|YP_918084.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119377624|gb|ABL72388.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
Length = 711
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILN----KFPSTVIAIQSHTDSIGTLKNNLLI 129
+P + L + ++ + P + I+ +TD++G+ NL +
Sbjct: 593 VNVPEITFDTGSSAITPDQAQELATLGKVIRDSIDQDPREIYMIEGYTDAVGSDAANLAL 652
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
S RA+ + L + + V+G+ ++ + D + N+R+
Sbjct: 653 SDRRAESVALALTEYFQVPPENMVVQGYGEQFLLVPTDGPE--RQNRRV 699
>gi|329849481|ref|ZP_08264327.1| ompA family protein [Asticcacaulis biprosthecum C19]
gi|328841392|gb|EGF90962.1| ompA family protein [Asticcacaulis biprosthecum C19]
Length = 408
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L ++ A + + + H D+ G+ N+ +S+ RA +
Sbjct: 304 VYFEFDKSDLTADAQAVVSAAADYAKTGGAARVVVVGHADTSGSAAYNIRLSERRAKTVA 363
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L GV ++ ++V P V N+R I I
Sbjct: 364 DALAGLGVDGSK-LAVDWKGESQPAVATGDGVKEPLNRRSTIDI 406
>gi|294626797|ref|ZP_06705390.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292598913|gb|EFF43057.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 419
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 51/143 (35%), Gaps = 9/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
+ + Q + + V D + F V +E + ++ IA + +
Sbjct: 277 RLKQLLSAQERAGLLRVDEQADGQTRVRLSSAAMFASGGVEVEPQQRGVIAQIAAAIEQL 336
Query: 107 PSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P VI + HTD + ++N +S RA + L + + R + G P
Sbjct: 337 PGRVIVV-GHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGR-VEATGAGDSQP 394
Query: 163 ID-TNDTKVGRQNNQRIEIQIFP 184
I R N+R+EI P
Sbjct: 395 IAQPVQLPANRARNRRVEILFQP 417
>gi|187921498|ref|YP_001890530.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans
PsJN]
gi|187719936|gb|ACD21159.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 371
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 47/129 (36%), Gaps = 11/129 (8%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFV--SEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHT 117
T V + +T F + L + L + I+I +T
Sbjct: 216 TAAKVEPLPQKVTLQADATFKFDRGDLAGMLPAGKAKLDELIRSLKQADDVTGISIDGYT 275
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT------KVG 171
D +G+ N +S +RA+ +K YL + + IS RG + P+ +
Sbjct: 276 DRLGSDSYNRQLSAKRAETVKRYL--QSGGVSPVISTRGHGKEDPVVQCNDHNRAALIAC 333
Query: 172 RQNNQRIEI 180
N+R+E+
Sbjct: 334 LAPNRRVEL 342
>gi|332527142|ref|ZP_08403219.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
JA2]
gi|332111570|gb|EGJ11552.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
JA2]
Length = 322
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFP 107
A + ++R G I + + ++ +LQ I ++L + P
Sbjct: 142 ANKRLSAMRSQLRLDMTRDGLRIQIVDEQNRPMFASGSAVVQPYMRELLQEIGSVLAEVP 201
Query: 108 STVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ + ++ HTD++ +N +S +RA+ + L + G+ +R + V+G A P
Sbjct: 202 N-RLTLEGHTDAMAYAGGERGYSNWELSSDRANASRRVLAEGGLPEDRMLRVQGLASSQP 260
Query: 163 IDTNDTKVGRQNNQRIEIQIFPRG 186
D D N+RI I + R
Sbjct: 261 FDRQDPLA--PTNRRISIIVMNRE 282
>gi|83312507|ref|YP_422771.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
gi|82947348|dbj|BAE52212.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
Length = 278
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++ L K+ L+ +AT + I + HTD++G N +S RA +
Sbjct: 176 VYFDFNKSTLTKEAQKTLKEVATAAGQIKPASIYVAGHTDTVGKSGYNDKLSNARAAAVS 235
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L + G+ + I + F + N+R+EI
Sbjct: 236 KQLAKAGI---KSIDAKSFGFTKLAVPTKANTKEAKNRRVEIY 275
>gi|46251334|gb|AAS84615.1| outer membrane protein [Helicobacter pylori]
Length = 147
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 47/152 (30%), Gaps = 6/152 (3%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC ++ + ++ +K E + + +V + I
Sbjct: 1 GCKHNMDKETVAGDVSAKAVQSAPVSTETAQEKQEPKQEPA----PVVEEKPAVESGTII 56
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ +++ L I + + ++ +TD G+ + N + +R
Sbjct: 57 ASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDEFGSSEYNQALGVKRTLS 115
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+K+ L+ + I F P T T
Sbjct: 116 VKNALVIK-GVEKDMIKTISFGETKPKCTQKT 146
>gi|251733445|emb|CAR82472.1| pal [Bradyrhizobium elkanii]
Length = 87
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L + L A L + I+ H D GT + N+ + RA +++YL
Sbjct: 2 DQTDLSPQATATLDKQAQWLQTYNRYSFTIEGHADERGTREYNIALGARRAQSVRAYLAS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RG+ +R ++ + + P+ +
Sbjct: 62 RGIDPSRMRTIS-YGKERPVAVCND 85
>gi|167845593|ref|ZP_02471101.1| ompA family protein [Burkholderia pseudomallei B7210]
Length = 277
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 73 TCYIPVHVSFVSEV----FLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNN 126
+P F + + L + + + + +TD +G+ ++N
Sbjct: 154 RVELPTDTLFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLVVTGYTDRLGSDEHN 213
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEI 180
+S ERA + Y+I I+ G P+ + Q N+R+EI
Sbjct: 214 ARLSSERARTVADYMIAE-GIPAAKITAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEI 272
Query: 181 QI 182
+I
Sbjct: 273 RI 274
>gi|323224726|gb|EGA08995.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
Length = 309
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 67/184 (36%), Gaps = 20/184 (10%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMI 72
+++ + N ++ + S L+K + ++ I + + G I
Sbjct: 92 TQQQGEVEKQPNIDELKKRMEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRI 151
Query: 73 TC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
+ +E +L+ IA +LN P+ I++ HTD +
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPN-RISLAGHTDDFPYANGEKGYS 210
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + + V G A + N+RI + + +
Sbjct: 211 NWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNK 268
Query: 186 GNIK 189
+
Sbjct: 269 QAEQ 272
>gi|145297230|ref|YP_001140071.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142850002|gb|ABO88323.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 368
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 11/116 (9%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATIL-NKFP-STVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ L + + + P + HTD IG+ N +S++RA
Sbjct: 246 SDVLFEFNKATLKPAASHALDTLFSQIVAANPKDGAATVVGHTDRIGSDAYNQALSEQRA 305
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--------KVGRQNNQRIEIQI 182
+ YLI + + V G P+ N+ ++R+EI +
Sbjct: 306 RTVADYLIAK-GLFADKVRVEGRGKSSPVTGNNCTTGSRPALIACLAPDRRVEIHL 360
>gi|254260999|ref|ZP_04952053.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|254219688|gb|EET09072.1| ompA family protein [Burkholderia pseudomallei 1710a]
Length = 254
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 73 TCYIPVHVSFVSEV----FLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNN 126
+P F + + L + + + + +TD +G+ ++N
Sbjct: 131 RVELPTDTLFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLVVTGYTDRLGSDEHN 190
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEI 180
+S ERA + Y+I I+ G P+ + Q N+R+EI
Sbjct: 191 ARLSSERARTVADYMIAE-GIPAAKITAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEI 249
Query: 181 QI 182
+I
Sbjct: 250 RI 251
>gi|264676590|ref|YP_003276496.1| OmpA/MotB [Comamonas testosteroni CNB-2]
gi|262207102|gb|ACY31200.1| OmpA/MotB [Comamonas testosteroni CNB-2]
Length = 355
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 59/154 (38%), Gaps = 13/154 (8%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+ L++ + + ++ G+++ + D + ++ +L+ I
Sbjct: 139 ANNARLNEFRSQIRTEITHDGLMIQIVDDQ-----NRPMFDSGSAVVKPYMRDILREIGA 193
Query: 102 ILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ I++ HTD+ +N +S +RA+ + L+ G+ ++ V G
Sbjct: 194 AM-GNAENRISLSGHTDAAPYGNADRGYSNWELSADRANASRRELVAAGMPLDKLARVVG 252
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + + + N+RI I + + ++
Sbjct: 253 MASSDLLLPEEPRA--AQNRRITITVLTKEAERR 284
>gi|284035326|ref|YP_003385256.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283814619|gb|ADB36457.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 399
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 11/155 (7%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE-------FQMQLQDTGIVVSRIG---D 70
++ + ++ +V + ++ + L + G
Sbjct: 227 TPKKAPDITKTQALPEAVVKSAKTAYVETPTAKPAIKVPVLSSNLPMPAVTNKPFGPLEK 286
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ S L + L +A +L + P+T I I+ HTD+ G +N+ +S
Sbjct: 287 GKAIPLRNIYFDQSSPVLRPESSTELDQLAAVLLESPTTKIEIRGHTDNQGDFDSNVKLS 346
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
++R + YL + + + G P+
Sbjct: 347 RDRCQAVIDYLASK-GIAKNRLKAVGRGPIDPVAP 380
>gi|329890064|ref|ZP_08268407.1| chemotaxis protein motB [Brevundimonas diminuta ATCC 11568]
gi|328845365|gb|EGF94929.1| chemotaxis protein motB [Brevundimonas diminuta ATCC 11568]
Length = 300
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 20/185 (10%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMI 72
A + ++ + +R + A + + +Q +++ + + +
Sbjct: 112 AGQNSNLASASEAALRAEIARREAADFASAAESLRQAMQSMPELAELSKQLIIDQTPEGL 171
Query: 73 TCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD-----SIGTL 123
+ + + +L+ +A ++N+ P+ I I HT S +
Sbjct: 172 RIQLVDQEGRSMFENGSSRPNPRAQLLLRAVAKVINQLPN-RITITGHTSAVAGSSRASS 230
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +S RAD + L GVSS+R SV G A P+ +D N+RI I +
Sbjct: 231 PGDWPLSSARADASRLTLQSAGVSSDRVYSVAGKAGSDPLYPDDP--SLAGNRRIAIVLL 288
Query: 184 PRGNI 188
+
Sbjct: 289 REAPV 293
>gi|269123033|ref|YP_003305610.1| OmpA/MotB domain-containing protein [Streptobacillus moniliformis
DSM 12112]
gi|268314359|gb|ACZ00733.1| OmpA/MotB domain protein [Streptobacillus moniliformis DSM 12112]
Length = 367
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 57/149 (38%), Gaps = 6/149 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
IV K + + E++ +M + I + + L+++
Sbjct: 224 AVEPIVIKEDDGKIRELENKIEMLTMLINNMDKNRDKEIKEIYFISGFDSGKFTLKQEHK 283
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
++ + + L I + +TD+ GT K NL + RA +K YL +GV S
Sbjct: 284 NIIDSLISGLK---DKEIIVVGYTDTDGTDKYNLNLGLNRAKSVKIYLENKGVKVKETRS 340
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ I N T + N+R+EI +
Sbjct: 341 A---GFNELIRDNKTSENKALNRRVEIMV 366
>gi|149918190|ref|ZP_01906682.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149820950|gb|EDM80357.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 780
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 72/184 (39%), Gaps = 11/184 (5%)
Query: 4 ELGLSMFIM---TTISGCGLASRE-KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+ +++ + T++ GL ++ V + T+ + D A
Sbjct: 592 RIAIALPMGEYKATLTAEGLPPKDITFSVTEEGAIVTETLGAESAEGGDAAAGGGAADP- 650
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTD 118
G+ + + E K L +A L P + ++ HTD
Sbjct: 651 -GMETPLISGNKYRVRVKKKPRYSGGELNEDKSAEGLDQLAAFLLAHPEYGKVQVRVHTD 709
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G K SQ+RAD + SYL+++GV + R + +G+ K P+ N T GR+ N R
Sbjct: 710 DRGNPK---KRSQDRADAVVSYLVKKGVPAGR-LEAKGWGAKDPVAVNITSDGRRKNNRT 765
Query: 179 EIQI 182
E ++
Sbjct: 766 EFRV 769
>gi|16125820|ref|NP_420384.1| chemotaxis MotB protein [Caulobacter crescentus CB15]
gi|221234581|ref|YP_002517017.1| chemotaxis motB protein [Caulobacter crescentus NA1000]
gi|13422964|gb|AAK23552.1| chemotaxis MotB protein [Caulobacter crescentus CB15]
gi|220963753|gb|ACL95109.1| chemotaxis motB protein [Caulobacter crescentus NA1000]
Length = 298
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 20/186 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGD 70
+S + D + K+ S A + LQD I++ + +
Sbjct: 112 AQSSETANLDSASEQALRDALAKKEQDSFASAAQSLRQSLQDMPELAELSKQILIDQTPE 171
Query: 71 MITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT---L 123
+ + + + + +L+ +A ++N+ P+ + I HT +
Sbjct: 172 GLRIQLVDQEGRSMFKENSREPNDRARVLLRAVAKVINQLPN-RVTISGHTSANAFGKKQ 230
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI-DTNDTKVGRQNNQRIEIQI 182
+ +S +RAD + L GV +R V G A P+ + T G N+RI I +
Sbjct: 231 DGDWALSAQRADASRQVLRSAGVDDDRVYQVSGKANSEPLYADDPTLAG---NRRISIVL 287
Query: 183 FPRGNI 188
+
Sbjct: 288 LREKPV 293
>gi|326336146|ref|ZP_08202318.1| OmpA/MotB domain protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691655|gb|EGD33622.1| OmpA/MotB domain protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 394
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 10/167 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
LA + +K + + + + L+ E D+I
Sbjct: 234 SLAKKLDEKEDRMIDTNGNRIPDEIENYLN--EKYGNSANAQNYATGDTARDLIEKGYIN 291
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ +K L +A L + + + I + D IG N +S +RA+ IK
Sbjct: 292 VYFDFNSSKPQKSSLWAADFVANYLKQNSGSSVNIVGYADEIGGENYNQKLSNKRAEAIK 351
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPI---DTNDTKVGRQNNQRIEIQI 182
L+ RG+ ++R +S G + N RQ +R+ ++
Sbjct: 352 QLLVDRGIDASR-LSFEGKGEDKTVNVKAPN----ARQLARRVTFEL 393
>gi|258624680|ref|ZP_05719615.1| chemotaxis LafU protein [Vibrio mimicus VM603]
gi|258583072|gb|EEW07886.1| chemotaxis LafU protein [Vibrio mimicus VM603]
Length = 315
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 56/172 (32%), Gaps = 22/172 (12%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDE----------FQMQLQDTGIVVSRIGDMITCYIPVHV 80
D N + + E + V+ + +
Sbjct: 107 QGDGDGPESNSLIDGNFETQEQLTLLAKVVKKVIGQVSAQGNVNVTVTPQGLRIVLQDDY 166
Query: 81 ----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN-----NLLISQ 131
L F +L +A + + + I I HTDSI K N +S
Sbjct: 167 KQFMFSRGGSELTPFFEDLLLALAPVFQRVAN-PIIISGHTDSIPFRKKISKTSNWELSA 225
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+V + L+ G+ + R + V G + + + N T N+RIE+ +
Sbjct: 226 SRANVARKALVDGGMPAERVLQVTGMSDRALL--NQTAPDSSENRRIELFVL 275
>gi|258651985|ref|YP_003201141.1| OmpA/MotB domain-containing protein [Nakamurella multipartita DSM
44233]
gi|258555210|gb|ACV78152.1| OmpA/MotB domain protein [Nakamurella multipartita DSM 44233]
Length = 478
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 66/175 (37%), Gaps = 23/175 (13%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIV---NKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ + G + +E + L + D D+ + +G+++D+ ++ D
Sbjct: 323 LGAILWGFKIEDKENAPIVLTGAKDADVTDTPSAAWGATMDQYYAAKYAEILDD------ 376
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + L+ L + T L + + D G K N+
Sbjct: 377 -------------FDIGKADLKDAHKTQLDSVVTKLQGNAALRAQLGGAADLTGGAKVNM 423
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S +RA+ + YL+ +G+ + R + V+ + + T N+R+++ +
Sbjct: 424 ALSLKRAENARDYLVSKGIDAAR-LEVQSYGADWARVATTTGTNESKNRRVQVWV 477
>gi|227822263|ref|YP_002826234.1| OmpA family protein [Sinorhizobium fredii NGR234]
gi|227341263|gb|ACP25481.1| OmpA family protein [Sinorhizobium fredii NGR234]
Length = 758
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIAT----ILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + L+ +A +L K P I+ HTD++G+ ++NL+
Sbjct: 636 RIDLDTIEFATGSAEVSMSQAKTLRNVADAMSKVLEKDPGETFFIEGHTDAVGSDRSNLV 695
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
+S ERA+ + L + + +G+ ++ T Q N+R+ I ++ P
Sbjct: 696 LSDERAESVAVLLTEVYGVPAENLVTQGYGERFLKI--RTPEAEQENRRVTIRRVTP 750
>gi|149186172|ref|ZP_01864486.1| putative outer membrane lipoprotein [Erythrobacter sp. SD-21]
gi|148830203|gb|EDL48640.1| putative outer membrane lipoprotein [Erythrobacter sp. SD-21]
Length = 245
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 50/160 (31%), Gaps = 4/160 (2%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+ + + + S +D + + + D +
Sbjct: 74 DDVRRTRAAQIVSSVRGVGGVSWVDGSVSARSGERAFEPLHCQEDVDGL-LRTRTIRFQE 132
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L +L +A L +IAI HT+ G+ NL +S +RA + +
Sbjct: 133 ASAALLPASRILLDEVAAALEPCSGAIIAITGHTNKSGSEAANLALSMDRAR-VVREALV 191
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R + RG P + + N+RIE +
Sbjct: 192 RRGIPRSSLRARGMGSSEPAERLKPED--PANRRIEFSVI 229
>gi|117617594|ref|YP_855822.1| major outer membrane protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559001|gb|ABK35949.1| major outer membrane protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 344
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 54/152 (35%), Gaps = 12/152 (7%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--P 107
+++ ++ + + + L+ + + L + + +F
Sbjct: 194 VAPAPAPVVEEAPAPAPQVVEKNFALNSDVLFAFGKDSLKPEGVAALNGLYQQIVEFQPK 253
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI---- 163
+ +TD IG+ N +S+ RA + ++L+ + + ++V G P+
Sbjct: 254 DGNAVVVGYTDRIGSDAYNQKLSEARARTVANFLVSK-GMAASKVAVEGRGEANPVTGTK 312
Query: 164 -----DTNDTKVGRQNNQRIEIQIFPRGNIKK 190
++R+E+++ ++K
Sbjct: 313 CNGVKAKAQLISCLAPDRRVEVRVSGVQEVQK 344
>gi|329901809|ref|ZP_08272908.1| outer membrane protein, OmpA family [Oxalobacteraceae bacterium
IMCC9480]
gi|327549018|gb|EGF33629.1| outer membrane protein, OmpA family [Oxalobacteraceae bacterium
IMCC9480]
Length = 396
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 52/136 (38%), Gaps = 11/136 (8%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ V +T +P ++F L + L + + +AI +T
Sbjct: 262 PNGYCEVCPKTVPVTTTLPGDINFAFGRSTLTAAGMQQLDALIISARAGNYSAVAITGYT 321
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-----TNDT---- 168
D IG+ NL +SQ RA + Y+I ++R I+ G + T
Sbjct: 322 DQIGSAAENLALSQARARTARQYMIA-HGLTDRAITATGAGATNLKVELAQCSGKTGAAL 380
Query: 169 KVGRQNNQRIEIQIFP 184
+ +N+R+E+ + P
Sbjct: 381 QACLADNRRVEVTLIP 396
>gi|325523985|gb|EGD02181.1| putative OmpA family membrane protein [Burkholderia sp. TJI49]
Length = 50
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + +S +G PI N T+ GR N+R+EI +
Sbjct: 1 NALVQRGVAGGRLSAQGMGASNPIADNATEAGRAQNRRVEIYL 43
>gi|307611161|emb|CBX00805.1| hypothetical protein LPW_25091 [Legionella pneumophila 130b]
Length = 253
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 71/179 (39%), Gaps = 12/179 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+E + ++ + + S++K + + + V G I
Sbjct: 74 AKDKEIIESQANEIKKLEELKSEINLSMEK-DPSLAGLKKQLLMDVVSDGLRIQLIDNQK 132
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN------NLLISQ 131
+ V + + P+L IA +LN P+ I IQ HTD+ N +S
Sbjct: 133 KPMFDVGSDKINPEIEPILANIAKLLNSVPN-KITIQGHTDANPYHNPEELEYTNWELSA 191
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+RA+ + LI+ G+ N+ ++V G++ +D + N+RI I + +G K
Sbjct: 192 QRANAARRALIKAGMDENKVMTVTGYSSTVLLDKKNPY--NPENRRISIIVMKKGAENK 248
>gi|163746609|ref|ZP_02153967.1| Outer membrane protein, OmpA/MotB family [Oceanibulbus indolifex
HEL-45]
gi|161380494|gb|EDQ04905.1| Outer membrane protein, OmpA/MotB family [Oceanibulbus indolifex
HEL-45]
Length = 639
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 16/166 (9%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRIGDMIT--CYIPVH 79
L + +T + Q +L+ + R + +
Sbjct: 469 LPQVQETQQAQRASVQDEAALRQALQAELRSDQGRTFSLRQVREIREVRSLAPELELDAV 528
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
++ + L I + L P TVI ++ HTD++G NL +S RA+
Sbjct: 529 RFPTGSAAIQPEQARALANIGSTLRDMIANDPRTVILVEGHTDAVGDAGYNLALSDRRAE 588
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ L + + +G+ T N+R ++
Sbjct: 589 TVALALTEYFDVPPANLITQGYGESQLRVPTTTAE--PANRRAVVR 632
>gi|115522545|ref|YP_779456.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115516492|gb|ABJ04476.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 628
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + LQ IA LN+ P V I+ HTD+ G +NL +
Sbjct: 496 IDLNTITFESGSWDIAPDQALKLQAIADGLNRAIERNPREVFLIEGHTDATGNDTDNLSL 555
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA+ + L Q+ ++ +G+ +Y N+R+ + +I P
Sbjct: 556 SDRRAESAAALLTQQFGVPAENLTSQGYGEQYLKVPTQGPEL--ANRRVTVRRITP 609
>gi|89067611|ref|ZP_01155065.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola
granulosus HTCC2516]
gi|89046581|gb|EAR52636.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola
granulosus HTCC2516]
Length = 675
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 6/108 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPML----QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + + L Q I I+ + P V I+ HTD++G NL +
Sbjct: 559 IALEEINFETASAAIRPEEAEELAALGQAITAIIRENPRAVFLIEGHTDAVGNASYNLAL 618
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
S RA+ + L + + +G+ + T + N+R
Sbjct: 619 SDRRAESVALALTEYFGVPPENLVTQGYGESQLLVP--TAEAERANRR 664
>gi|163866750|gb|ABY47335.1| putative outer membrane protein [Aeromonas hydrophila]
Length = 339
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 49/125 (39%), Gaps = 12/125 (9%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + + L + + +F + +TD IG+ N +S+ RA
Sbjct: 216 SDVLFAFGKDTLKPEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRIGSDAYNQKLSEARA 275
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI----DTNDTK-----VGRQNNQRIEIQIFPR 185
+ ++L+ + + +++ G P+ T ++R+E+++
Sbjct: 276 RTVANFLVSK-GMAASKVAIEGRGEANPVTGTKCNGVTAKAQLISCLAPDRRVEVRVSGV 334
Query: 186 GNIKK 190
++K
Sbjct: 335 QEVQK 339
>gi|148475217|dbj|BAF63174.1| major outer membrane protein OmpAI [Aeromonas veronii]
Length = 340
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 49/125 (39%), Gaps = 12/125 (9%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + + L + + +F + +TD IG+ N +S+ RA
Sbjct: 217 SDVLFAFGKDTLKPEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRIGSDAYNQKLSEARA 276
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI----DTNDTK-----VGRQNNQRIEIQIFPR 185
+ ++L+ + + +++ G P+ T ++R+E+++
Sbjct: 277 RTVANFLVSK-GMAASKVAIEGRGEANPVTGTKCNGVTAKAQLISCLAPDRRVEVRVSGV 335
Query: 186 GNIKK 190
++K
Sbjct: 336 QEVQK 340
>gi|146280852|ref|YP_001171005.1| outer membrane protein [Pseudomonas stutzeri A1501]
gi|145569057|gb|ABP78163.1| outer membrane protein [Pseudomonas stutzeri A1501]
Length = 179
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 52/183 (28%), Gaps = 17/183 (9%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM 71
M + GC S + V LD + VS +
Sbjct: 1 MAALGGCAQHSY--VMLADDSGGRGAAVLGDEQRVLDMPGQGMAIAPGGQAFTVSDMQRK 58
Query: 72 ITCY--------IPVHVSFV--SEVFLEKKFLPMLQLI--ATILNKFPSTVIAIQSHTDS 119
+P +F L+ +L + A +P V+ + HTD+
Sbjct: 59 ADFAKALSAQPALPERFTFHLAPSGELDAGAEQLLDSVLLAARRRDYP--VVTVIGHTDT 116
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+G N + RA + L R + V + + N+R+E
Sbjct: 117 LGHRAANEQVGMRRAQRMAELLRAR-GLEAMELRVESHGERNLLVATPDATAEPRNRRVE 175
Query: 180 IQI 182
+ +
Sbjct: 176 VLV 178
>gi|254447506|ref|ZP_05060972.1| OmpA family protein [gamma proteobacterium HTCC5015]
gi|198262849|gb|EDY87128.1| OmpA family protein [gamma proteobacterium HTCC5015]
Length = 1980
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 7/109 (6%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-------LKNNLLISQER 133
L ++ I + ++K I + H D+ +N +S R
Sbjct: 474 FESFSAELGEEDQQHFDQILSQVDKQRVQRITVIGHADTRPIRARSQSIYADNQALSLAR 533
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A+V Y QR + V G +P+ + N+R+EI I
Sbjct: 534 ANVAAEYARQRLGLEADKVDVLGKGDSFPLLKGRSGEDNAANRRVEIVI 582
>gi|347157|gb|AAC36901.1| protein F [Pseudomonas fluorescens]
Length = 296
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ ++ +A + ++P+T + + HTDS+G N +SQ RAD +
Sbjct: 215 DVKFDFDKAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLSQRRADAV 274
Query: 138 KSYLIQRGVSSNRFISVRGFA 158
K ++ + + ++ G+
Sbjct: 275 KQ-VLVKDGVAPSRVTAVGYG 294
>gi|329847556|ref|ZP_08262584.1| ompA family protein [Asticcacaulis biprosthecum C19]
gi|328842619|gb|EGF92188.1| ompA family protein [Asticcacaulis biprosthecum C19]
Length = 438
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 34/104 (32%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L ++ A P + + H D+ G+ N+ +SQ RA ++
Sbjct: 334 VYFPFNSATPTADGLAVISAAAQQARSQPGAPVTVTGHADTSGSAPYNIQLSQNRARMVA 393
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
LI + ++ P V N+R I I
Sbjct: 394 DGLI-QMGVPASAVNTDWKGEAQPAVPTGNGVKNAENRRATISI 436
>gi|254197945|ref|ZP_04904367.1| ompA family protein [Burkholderia pseudomallei S13]
gi|169654686|gb|EDS87379.1| ompA family protein [Burkholderia pseudomallei S13]
Length = 254
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 73 TCYIPVHVSFVSEV----FLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNN 126
+P F + + L + + + + +TD +G+ ++N
Sbjct: 131 RVELPTDTLFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLVVTGYTDRLGSDEHN 190
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEI 180
+S ERA + Y+I I+ G P+ + Q N+R+EI
Sbjct: 191 ARLSSERARTVADYMIAE-GIPAAKITAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEI 249
Query: 181 QI 182
+I
Sbjct: 250 RI 251
>gi|209963560|ref|YP_002296475.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
gi|7025363|gb|AAF35851.1|AF220005_2 lateral flagellar motor protein MotB [Rhodospirillum centenum]
gi|209957026|gb|ACI97662.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
Length = 325
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 69/194 (35%), Gaps = 28/194 (14%)
Query: 17 GCGLASREKKKVFLHKSNDTD---------IVNKRFGSSLDKAEDEFQMQL--------Q 59
G G +++E + N T S D+ E + L
Sbjct: 125 GGGASAQENAESAPADGNGTPMTAALEQQLQQVAAEEQSFDRIEQSVRDALMSAVDLADL 184
Query: 60 DTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+V R D + I + L + + +L ++A L+ P+ IAI
Sbjct: 185 SQNLVFERTADGLRIQITDRPHFSMFDSGATDLNGRAVTLLGIVAEALSGVPN-RIAISG 243
Query: 116 HTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
HTD N N +S +RA+ + L+Q+G+ R V G A + D G
Sbjct: 244 HTDGRPFAANARYGNWELSADRANAARRVLLQKGIQPGRVARVEGLADTLHLLPEDP--G 301
Query: 172 RQNNQRIEIQIFPR 185
N+RI I + R
Sbjct: 302 DPRNRRISIIVMRR 315
>gi|319409174|emb|CBI82818.1| putative flagellar motor protein MotB [Bartonella schoenbuchensis
R1]
Length = 396
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 59/171 (34%), Gaps = 8/171 (4%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G + ++ + + D ++ ++ R G MI
Sbjct: 194 GIEWKEGQAQQQLAQEDAPSQESRDFAKELADLIKEITDENHLSASVLPIREGVMIELMD 253
Query: 77 PVHV--SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL---KNNLLISQ 131
V + + + IA ++ K P + + HTD+ ++N +S
Sbjct: 254 QPEYEMFKVGSSVPTAQTVEFIDRIAKVIAKHPG-NVVVGGHTDARPYRSTTRDNWQLST 312
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA ++ L++ G+ R + V G+A + + D N+R I +
Sbjct: 313 SRAQMVYYMLVRGGLDEKRILRVEGYADRNLKNKQDPYA--SENRRTSIFV 361
>gi|167918843|ref|ZP_02505934.1| ompA family protein [Burkholderia pseudomallei BCC215]
Length = 290
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 73 TCYIPVHVSFVSEV----FLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNN 126
+P F + + L + + + + +TD +G+ ++N
Sbjct: 167 RVELPTDTLFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLIVTGYTDRLGSDEHN 226
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEI 180
+S ERA + Y+I I+ G P+ + Q N+R+EI
Sbjct: 227 ARLSSERARTVADYMIAE-GIPAAKITAVGRGAAEPVVVCNNGEQPELIRCLQKNRRVEI 285
Query: 181 QI 182
+I
Sbjct: 286 RI 287
>gi|296238955|gb|ADH01478.1| OmpA family protein [Pseudomonas sp. 2663]
Length = 535
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 16/130 (12%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNL 127
+ + V + + F ++ + +P + + HTD NN
Sbjct: 373 LLVFRSDGAFDVGKAQVRTDFERNIERLGAAFAPWPG-DLEVIGHTDRQPIRTSEFGNNQ 431
Query: 128 LISQERADVIKSYLIQRGVS---------SNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+S+ RA + L + + R I G PID+ T + N+R+
Sbjct: 432 ALSEARARTVADELRRTALPGGAQAPGNAVQRNIGFSGRGDTQPIDSAQTPAAYERNRRV 491
Query: 179 EI--QIFPRG 186
++ ++ P G
Sbjct: 492 DVLWKVIPAG 501
>gi|299531265|ref|ZP_07044675.1| OmpA/MotB [Comamonas testosteroni S44]
gi|298720672|gb|EFI61619.1| OmpA/MotB [Comamonas testosteroni S44]
Length = 355
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 59/154 (38%), Gaps = 13/154 (8%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+ L++ + + ++ G+++ + D + ++ +L+ I
Sbjct: 139 ANNARLNEFRSQIRTEITHDGLMIQIVDDQ-----NRPMFDSGSAVVKPYMRDILREIGA 193
Query: 102 ILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ I++ HTD+ +N +S +RA+ + L+ G+ ++ V G
Sbjct: 194 AM-GNAENRISLSGHTDAAPYGNADRGYSNWELSADRANASRRELVAAGMPLDKLARVVG 252
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A + + + N+RI I + + ++
Sbjct: 253 MASSDLLLPEEPRA--AQNRRITITVLTKEAERR 284
>gi|38146954|gb|AAR11862.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
gi|38146956|gb|AAR11863.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
gi|38146958|gb|AAR11864.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
gi|38146960|gb|AAR11865.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
gi|38146962|gb|AAR11866.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
Length = 141
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
I + + +L+ + K +T I I HTD+ GT + NL + ++RA
Sbjct: 40 TIEKIYFDFGKATIGDSDKAILEKVIQKAQKDTNTNIVIVGHTDTRGTDEYNLELGEQRA 99
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYP---IDTNDTKVG 171
+ +K ++I+ S I+V+ P + +++ +
Sbjct: 100 NAVKDFIIEHDKSLENRITVQSKGKSEPAVLVYSSNPEEA 139
>gi|160898923|ref|YP_001564505.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
gi|160364507|gb|ABX36120.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
Length = 168
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 6/141 (4%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+ + +E Q L+ G + G + + + + + +
Sbjct: 31 QVPAKAPGLTEEQQQLLRSQGFAQADQGWELQMS-GKLLFGFDSAEVGAQARTKVLELGR 89
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
L + ++ HTD G+ N+ +S RA+ + ++ + + I V+G
Sbjct: 90 ALKGVGIERLRVEGHTDDRGSDAYNMRLSLRRAEAVAD-VLAEAGLARQDIEVKGLGRAM 148
Query: 162 PIDTNDTKVGRQNNQRIEIQI 182
P+ +D N+R+ I +
Sbjct: 149 PVVPSDAAE----NRRVAIVV 165
>gi|326317618|ref|YP_004235290.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323374454|gb|ADX46723.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 188
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 2/131 (1%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ L+ G + G + + V L + + + L +
Sbjct: 57 ERKAAVLRQYGFEPTDAGWELQMS-GKLLFDFDSVELNAESHDGVLRMGRALADVGIDAL 115
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
++ HTD G N +S RA + ++ I G P+ +
Sbjct: 116 RVEGHTDEQGARAYNERLSLRRAQAVAR-VLAEAGLPADHIGTVGLGASRPVVQGTSAAS 174
Query: 172 RQNNQRIEIQI 182
R+ N+R+ I +
Sbjct: 175 RRENRRVAIIV 185
>gi|161502956|ref|YP_001570068.1| flagellar motor protein MotB [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160864303|gb|ABX20926.1| hypothetical protein SARI_01018 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 309
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 67/184 (36%), Gaps = 20/184 (10%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMI 72
+++ + N ++ + S L+K + ++ I + + G I
Sbjct: 92 TQQQGEVEKQPNIDELKKRMEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRI 151
Query: 73 TC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
+ +E +L+ IA +LN P+ I++ HTD +
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPN-RISLAGHTDDFPYANGEKGYS 210
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + + V G A + N+RI + + +
Sbjct: 211 NWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNK 268
Query: 186 GNIK 189
+
Sbjct: 269 QAEQ 272
>gi|260060612|ref|YP_003193692.1| OmpA family protein [Robiginitalea biformata HTCC2501]
gi|88784742|gb|EAR15911.1| OmpA family protein [Robiginitalea biformata HTCC2501]
Length = 623
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 51/126 (40%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
T G + ++ L+ VV + + L +
Sbjct: 466 TSAALGGPGQDSIISGVPARIALRSVDEVVRSVRERQELKAEKFYFGRGSSRLTDEIRTA 525
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
LQ L FP I I++HTDS G+ + NL +S++RA+ I+ YL++ G+ + R +
Sbjct: 526 LQEPLQALRDFPGLHIRIEAHTDSRGSEQANLSLSRQRAEAIRDYLVENGIDAERIEGIE 585
Query: 156 GFAYKY 161
GF
Sbjct: 586 GFGESQ 591
>gi|220921480|ref|YP_002496781.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219946086|gb|ACL56478.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
Length = 666
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATIL----NKFPSTVIAIQSHTDSIGTLKNNLLI 129
I + L +IA + + P V I+ +TD++G +NL +
Sbjct: 544 VDIDTITFDSGSWQIAPDQARRLAVIAEAIGRAVQRNPQEVFLIEGYTDAVGNDVDNLSL 603
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA + + L + ++ +G+ +Y +T+ + N+R+ + +I P
Sbjct: 604 SDRRAQEVATVLTRDFRVPPENLTTQGYGEQYLKV--NTQEASRENRRVTVRRITP 657
>gi|17230523|ref|NP_487071.1| hypothetical protein all3031 [Nostoc sp. PCC 7120]
gi|17132125|dbj|BAB74730.1| all3031 [Nostoc sp. PCC 7120]
Length = 599
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 44/143 (30%), Gaps = 12/143 (8%)
Query: 52 DEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF-- 106
+ I + + L L + + K
Sbjct: 450 PGLTQFQDQDLVESELNELAIYQSQIEREIIFFPEGSQEIIPSELSKLNNLVLAIKKLLP 509
Query: 107 ------PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
I I HT++ GT N +S R+ + SYL + S + V G +
Sbjct: 510 IAKYLEKDVHIQIIGHTNTTGTESRNAQLSAGRSQRVLSYLSSQ-GISTSQLQVLGVSSS 568
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P+ T G++ N+R+ ++
Sbjct: 569 QPLQPELTDEGKKFNRRVSFKVI 591
>gi|189461658|ref|ZP_03010443.1| hypothetical protein BACCOP_02321 [Bacteroides coprocola DSM 17136]
gi|189431630|gb|EDV00615.1| hypothetical protein BACCOP_02321 [Bacteroides coprocola DSM 17136]
Length = 379
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 57/137 (41%), Gaps = 1/137 (0%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ +S + D+ +++ + V + + + + + ++F
Sbjct: 221 NDAINTLRAESAAKTEGLEALQYENDQLKEKLNECMNAPKEVETIVQNTHSKSLESVITF 280
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ + LP ++ IAT + PS+ + I+ + G+ + N I+++RA+ +K+ L
Sbjct: 281 GQGKATVSADQLPNVERIATYMKNNPSSTVVIKGYASPEGSAEINARIAKQRAEAVKTIL 340
Query: 142 IQRGVSSNRFISVRGFA 158
I + S I+ G
Sbjct: 341 INKYKISASRITAEGQG 357
>gi|153831776|ref|ZP_01984443.1| lateral flagellar motor protein B [Vibrio harveyi HY01]
gi|148872286|gb|EDL71103.1| lateral flagellar motor protein B [Vibrio harveyi HY01]
Length = 330
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 60/172 (34%), Gaps = 22/172 (12%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDE----------FQMQLQDTGIVVSRIGDMITCYIPVHV 80
D ++ + D E + V+ + +
Sbjct: 107 QGDGDGPEIDSLIPGNFDTQEQLALLAKVIDEVVGQISAQGNVNVTITPQGLRIVLQDDY 166
Query: 81 ----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQ 131
L F +L +A + + + +I I HTDS ++N +S
Sbjct: 167 KQHMFSRGGAELTPFFEDLLLALAPVFERISNPLI-ISGHTDSTPFKKRFGRQSNWALSA 225
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RADV ++ L++ G+ +R + V G + + ++ + N+RIE+ I
Sbjct: 226 SRADVARNTLVEGGMPDDRVMQVTGMSDRALLNPEEPDS--SENRRIELFIL 275
>gi|45656096|ref|YP_000182.1| peptidoglycan associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|30984127|dbj|BAC76763.1| OmpA family outer membrane lipoprotein [Leptospira interrogans
serovar manilae]
gi|45599329|gb|AAS68819.1| peptidoglycan associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 195
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 75/194 (38%), Gaps = 20/194 (10%)
Query: 1 MIKELG-LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K++ L + S +S EKK+ T + ++D E
Sbjct: 1 MVKKILNLILLGAIAFSFTLCSSAEKKEESAAPEPSTQEQSAAANRNVDVNSPEAIADSL 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEK-KFLPMLQLIATILNK----FPS-TVIAI 113
+ + R D +T + + F + A ++ + P + I
Sbjct: 61 NEKLKDFRYPDGLT----RPGFSYKKADVTPGDFSEWSKTNAPVIKEGLGKLPDSYALEI 116
Query: 114 QSHTDSIGTLKN------NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
HTD+IG + N+ S+ RA+ +K LI++G+ +NR ++ +G P+ D
Sbjct: 117 TGHTDAIGPEQAEGAKKGNIFYSELRANAVKQALIKQGIPANRIVT-KGAGSSEPVSGLD 175
Query: 168 TKVGRQNNQRIEIQ 181
K N+R+ +
Sbjct: 176 AKD--AKNRRVTFR 187
>gi|300774087|ref|ZP_07083956.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300760258|gb|EFK57085.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 446
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 58/208 (27%), Gaps = 33/208 (15%)
Query: 5 LGLSMFIMTTISG--CG------LASREKKKVFLHKSNDTDIVNKRFG------------ 44
+ L + + + G C S + +N D + G
Sbjct: 240 IPLVLVALWFLFGKSCAGNGAGTSDSTSNGRDTSSMTNPADSLGAADGLSNRESVILKLP 299
Query: 45 ------SSLDKAEDEFQMQLQDT-GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ ED LQ + + L
Sbjct: 300 DGQELRAYPRGIEDNLIKFLQSDYKALPDDTLKNKWFDFDNLNFETGTAKILPASRDQLL 359
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A IL FP + I +TD G N +S +RA+ + + + G+
Sbjct: 360 NLAAILKVFPDAKVKIGGYTDKTGDESFNKKLSLDRANAV-KVFLDEQGLGAQVAGTEGY 418
Query: 158 AYK---YPIDTNDTKVGRQNNQRIEIQI 182
+ YP D + R ++R+ + +
Sbjct: 419 GSEIARYPAD--APESDRIKDRRVSVSV 444
>gi|46578466|ref|YP_009274.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough]
gi|46447877|gb|AAS94533.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough]
gi|311232394|gb|ADP85248.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
Length = 364
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 16/149 (10%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTV 110
Q G+ G++ I V F E L K+ +L A L
Sbjct: 94 KATLDGAQGKGVDFFDNGNVQILSIDADVLFGPGETRLSKEGERLLATFAPTLRTI-EHP 152
Query: 111 IAIQSHT-------------DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ + H + GTL + ++S RA + L GV S+R I + GF
Sbjct: 153 LLVAGHASPPRDEQGAGFRLRAEGTLSPSWMLSLRRATSVYRALRDLGVPSSRLI-LEGF 211
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+P T GR+ N+R+++ + R
Sbjct: 212 GDGHPRHDAFTATGRRANRRVDLVLDKRN 240
>gi|254720692|ref|ZP_05182503.1| hypothetical protein Bru83_14530 [Brucella sp. 83/13]
gi|265985741|ref|ZP_06098476.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839356|ref|ZP_07472172.1| lipoprotein [Brucella sp. NF 2653]
gi|264664333|gb|EEZ34594.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405604|gb|EFM61867.1| lipoprotein [Brucella sp. NF 2653]
Length = 172
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/182 (10%), Positives = 53/182 (29%), Gaps = 11/182 (6%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + +++ C + H+ + L E Q
Sbjct: 2 RTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQ-EELRLQVFPQEPTAQATMWPA 60
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + V V + + + L + + K + ++ G
Sbjct: 61 RPPKQTVSVYFPQDVTVFRPTSAQINQ-----LHTLLWPVPKHINVRGLTDNNCPPPGDT 115
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + + + + + + V+ +A P+ GR N+R++I+I
Sbjct: 116 QVARTRALAIYNWLINQGVPASKITISYAPVKDYASNAPLSP-----GRVLNRRVDIEIL 170
Query: 184 PR 185
+
Sbjct: 171 RK 172
>gi|183221921|ref|YP_001839917.1| hypothetical protein LEPBI_I2560 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|167780343|gb|ABZ98641.1| Hypothetical protein LEPBI_I2560 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 125
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 80 VSFVSEVFLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ F + L K L LQ +A LN+ + I I +H + N++IS++R+ ++
Sbjct: 21 IYFAKKSNLIPKPDLVRLQTVADFLNRNRNYEIHIDAHAVEGKNNEENIMISEKRSLEVE 80
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+L+ I + N TK N+R+EIQ+ P
Sbjct: 81 RFLLIHF-VEPNQIRRLFYGNTK--SPNQTKEHEALNRRVEIQLHP 123
>gi|258624773|ref|ZP_05719704.1| outer membrane protein [Vibrio mimicus VM603]
gi|258582935|gb|EEW07753.1| outer membrane protein [Vibrio mimicus VM603]
Length = 173
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 58/153 (37%), Gaps = 14/153 (9%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
++ + L++++ + +++ + + + P ++ L +
Sbjct: 32 SETQVQHTNQILNESKQQVEVKHRSDLCTYDEQSQSLLLHYP-----FNKYQLSGPHQEI 86
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
LQ +++ I ++ H D G K N +S+ RA + YL NR + +
Sbjct: 87 LQTYVSMV--DSQYKIVVEGHADQTGNPKYNQALSERRAGAVTRYLRDTLKLGNRIVE-K 143
Query: 156 GFAYKYPIDTNDTKVGRQN---NQRIEIQIFPR 185
GF P+ T N+R+ + I P+
Sbjct: 144 GFGESTPVC---TVQENAQTGCNRRVVLTIQPQ 173
>gi|258622497|ref|ZP_05717519.1| chemotaxis LafU protein [Vibrio mimicus VM573]
gi|258585197|gb|EEW09924.1| chemotaxis LafU protein [Vibrio mimicus VM573]
Length = 315
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 12/145 (8%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLPMLQLIATIL 103
+ + V+ + + L F +L +A +
Sbjct: 134 KVVKKVIGQVSAQGNVNVTVTPQGLRIVLQDDYKQFMFSRGGSELTPFFEDLLLALAPVF 193
Query: 104 NKFPSTVIAIQSHTDSIGTLKN-----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ + I I HTDSI K N +S RA+V + L+ G+ + R + V G +
Sbjct: 194 QRVAN-PIIISGHTDSIPFRKKISKTSNWELSASRANVARKTLVDGGMPAERVLQVTGMS 252
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + N T N+RIE+ +
Sbjct: 253 DRALL--NQTAPDSSENRRIELFVL 275
>gi|167719458|ref|ZP_02402694.1| ompA family protein [Burkholderia pseudomallei DM98]
Length = 277
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 73 TCYIPVHVSFVSEV----FLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNN 126
+P F + + L + + + + +TD +G+ ++N
Sbjct: 154 RVELPTDTLFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLIVTGYTDRLGSDEHN 213
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEI 180
+S ERA + Y+I I+ G P+ + Q N+R+EI
Sbjct: 214 ARLSSERARTVADYMIAE-GIPAAKITAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEI 272
Query: 181 QI 182
+I
Sbjct: 273 RI 274
>gi|94312620|ref|YP_585829.1| flagellar motor rotation proteinOmpA/MotB [Cupriavidus
metallidurans CH34]
gi|93356472|gb|ABF10560.1| OmpA/MotB, protein that enables flagellar motor rotation
[Cupriavidus metallidurans CH34]
Length = 325
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 71/201 (35%), Gaps = 26/201 (12%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR------FGSSLDKAEDEFQMQLQDT 61
S + I G G K + + + + L + + +++
Sbjct: 77 SSLSTSVIPGGGKDVTAKDGEIMKAQTNDPAADAQRRRDQIESERLRGLKKRLEQIIENN 136
Query: 62 GI----------VVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ ++ G I + +E +L+ I +LN+ P+
Sbjct: 137 PVLRQFRPQLLLDITSEGLRIQILDTQNRPMFRTGSAAVEPYMRTILREIGPVLNELPN- 195
Query: 110 VIAIQSHTDS-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+++ HTDS +N +S +RA+ + L+ G+ + + V G A P++
Sbjct: 196 KVSLSGHTDSAKYMMGQRAYSNWELSADRANASRQELVAGGMEEGKLLRVLGLADTMPLE 255
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
ND N+RI I + +
Sbjct: 256 KNDPLA--PVNRRISIVVLNQ 274
>gi|111223535|ref|YP_714329.1| hypothetical protein FRAAL4134 [Frankia alni ACN14a]
gi|111151067|emb|CAJ62776.1| conserved hypothetical protein; putative OmpA/MotB domain [Frankia
alni ACN14a]
Length = 252
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 47/118 (39%), Gaps = 10/118 (8%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTDSIGTLKNNLLIS 130
I + + + L ++N + I ++ HTD+ G+ +N +S
Sbjct: 134 ILIFNSDALFDTGSFAIGST--DTLDATIRLINSHYAGGDIQVRGHTDATGSAASNQTLS 191
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK------VGRQNNQRIEIQI 182
+ RAD ++ YL+ ++ G +P+ G++ N+R+E+ +
Sbjct: 192 ERRADTVRRYLVD-HGIRASSVTSVGLGSTHPLAEEANPDGSPDPEGQRFNRRVELVV 248
>gi|61655683|gb|AAX49328.1| PlpD [Mannheimia haemolytica]
Length = 217
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
G+ + + L K ++ +A L + + + +TD +G+ NL
Sbjct: 108 NGNSSFTLTGDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRLGSAAYNL 167
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+SQ R++ +K+ L+Q+GV++ I G+ + D + G++
Sbjct: 168 DLSQRRSNTVKARLVQQGVTAQ--IEAVGYGKANQVKACDGETGQEL 212
>gi|296101766|ref|YP_003611912.1| flagellar motor protein MotB [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295056225|gb|ADF60963.1| flagellar motor protein MotB [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 309
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 65/184 (35%), Gaps = 20/184 (10%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMI 72
+K+ + N ++ K + L K + ++ I + + G I
Sbjct: 92 TQKQGEVKKEPNIDELKRKMEQARLKKLRGDLDQLIEADPKLRALRPHLKIDLVQEGLRI 151
Query: 73 TC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
+ +E +L+ IA +LN P+ I++ HTD +
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPN-RISLSGHTDDFPYATGEKGYS 210
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + V G A + N+RI + + +
Sbjct: 211 NWELSADRANASRRELVAGGLDDGKVLRVVGMAATMRVSDRGPDD--AINRRISLLVLNQ 268
Query: 186 GNIK 189
+
Sbjct: 269 QAEQ 272
>gi|227539888|ref|ZP_03969937.1| OmpA/MotB [Sphingobacterium spiritivorum ATCC 33300]
gi|227240166|gb|EEI90181.1| OmpA/MotB [Sphingobacterium spiritivorum ATCC 33300]
Length = 446
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 59/208 (28%), Gaps = 33/208 (15%)
Query: 5 LGLSMFIMTTISG--CG------LASREKKKVFLHKSNDTDIVNKRFG------------ 44
+ L + + + G C S + +N +D + G
Sbjct: 240 IPLVLVALWFLFGKSCAGNGAGTSDSTSNGRDTSSMTNPSDSLGATDGLSNRESVILKLP 299
Query: 45 ------SSLDKAEDEFQMQLQDT-GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ ED LQ + + L
Sbjct: 300 DGQELRAYPRGIEDNLIKFLQSDYKALPDDTLKNKWFDFDNLNFETGTAKILPASRDQLL 359
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A IL FP + I +TD G N +S +RA+ + + + G+
Sbjct: 360 NLAAILKVFPDAKVKIGGYTDKTGDEAFNKKLSLDRANAV-KVFLDEQGLGAQVAGTEGY 418
Query: 158 AYK---YPIDTNDTKVGRQNNQRIEIQI 182
+ YP D + R ++R+ + +
Sbjct: 419 GSEIARYPAD--APESDRIKDRRVSVSV 444
>gi|171057687|ref|YP_001790036.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170775132|gb|ACB33271.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 320
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 19/181 (10%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDM 71
K + K L+ Q + ++ + ++R G
Sbjct: 102 GEVPSKKTYNAEAIKTSQRKAEQERLETLRQRVQDVMANSPKLAEFKNQIRLDMTRDGLR 161
Query: 72 ITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----N 125
I + + ++ +L+ I ++L + P+ + ++ HTD+ +
Sbjct: 162 IQIVDEQNRPMFDSGASEVKPYMREILRAIGSVLTEVPN-RLTLEGHTDAKPMGSGAGYS 220
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ R + V+G A P D D N+RI I + R
Sbjct: 221 NWELSSDRANASRRELLAGGLDDARVLRVQGLAASVPFDQQDPL--NPINRRISIIVMTR 278
Query: 186 G 186
Sbjct: 279 E 279
>gi|315499937|ref|YP_004088740.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48]
gi|315417949|gb|ADU14589.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48]
Length = 300
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 20/186 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGD 70
G A + + + KR +S A + + LQD I+V + +
Sbjct: 112 GTAKNAADLSQTPEEELREELQKREEASFRSAAESLRQALQDMPELAELSKNILVDQTPE 171
Query: 71 MITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT---DSIGTL 123
+ + + + ++ +L+ +A ++N+ P+ I+I HT +G
Sbjct: 172 GLRIQLIDQEGRAMFNANSTQPNERARLLLRAVAKVVNQLPN-RISITGHTTGTPGMGQS 230
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-TKVGRQNNQRIEIQI 182
+ +S +RAD + L GV +R V G A K P+ +D T G N+RI I +
Sbjct: 231 DKDWKLSADRADASRQVLQGAGVDQDRVAQVSGKAAKEPLYPDDPTLAG---NRRIAIIL 287
Query: 183 FPRGNI 188
+
Sbjct: 288 LREAPV 293
>gi|254457971|ref|ZP_05071398.1| putative membrane protein [Campylobacterales bacterium GD 1]
gi|207085364|gb|EDZ62649.1| putative membrane protein [Campylobacterales bacterium GD 1]
Length = 393
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 16/145 (11%)
Query: 62 GIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLI----ATILNKFPSTV-----I 111
G + ++ F E L+ L I +L P I
Sbjct: 239 GNSIEIDPQTGALRFSSNILFTQGEAELKPSAKKELSRILGKYIDVLLNDPKMRRYVDLI 298
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG----VSSNRFISVRGFAYKYPIDTND 167
I+ HT+S G+ NL +SQ RA + +L + +++S G ++ PI +
Sbjct: 299 TIEGHTNSDGSYLFNLDLSQRRALAVMEFLYTQYPNNRELFKKYLSASGRSFAEPILDAN 358
Query: 168 TKVGRQNNQRIEIQ--IFPRGNIKK 190
K + ++RIEI+ I +K+
Sbjct: 359 KKEDKDASRRIEIKFRIKSEDAVKE 383
>gi|16765264|ref|NP_460879.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56413159|ref|YP_150234.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62180499|ref|YP_216916.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161613518|ref|YP_001587483.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167552438|ref|ZP_02346191.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167994228|ref|ZP_02575320.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168238556|ref|ZP_02663614.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168241555|ref|ZP_02666487.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168259799|ref|ZP_02681772.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168462543|ref|ZP_02696474.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168820750|ref|ZP_02832750.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194444100|ref|YP_002041189.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194450845|ref|YP_002045977.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194472145|ref|ZP_03078129.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194737421|ref|YP_002114959.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197248088|ref|YP_002146098.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197264977|ref|ZP_03165051.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197362085|ref|YP_002141722.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198243979|ref|YP_002215160.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200390054|ref|ZP_03216665.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204931026|ref|ZP_03221852.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205352375|ref|YP_002226176.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856557|ref|YP_002243208.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224583574|ref|YP_002637372.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238912501|ref|ZP_04656338.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|2494511|sp|P55892|MOTB_SALTY RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
MotB
gi|1764128|gb|AAC45266.1| MotB [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16420459|gb|AAL20838.1| enables flagellar motor rotation [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56127416|gb|AAV76922.1| motility protein B [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62128132|gb|AAX65835.1| enables flagellar motor rotation, linking torque machinery to cell
wall [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161362882|gb|ABX66650.1| hypothetical protein SPAB_01238 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402763|gb|ACF62985.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194409149|gb|ACF69368.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194458509|gb|EDX47348.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194712923|gb|ACF92144.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195634203|gb|EDX52555.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197093562|emb|CAR59024.1| motility protein B [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197211791|gb|ACH49188.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197243232|gb|EDY25852.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197288646|gb|EDY28021.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197938495|gb|ACH75828.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602499|gb|EDZ01045.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204320070|gb|EDZ05275.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205272156|emb|CAR37011.1| motility protein B [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205322895|gb|EDZ10734.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205327891|gb|EDZ14655.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205339183|gb|EDZ25947.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205342679|gb|EDZ29443.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350979|gb|EDZ37610.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206708360|emb|CAR32664.1| motility protein B [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224468101|gb|ACN45931.1| flagellar motor protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261247092|emb|CBG24913.1| motility protein B [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267993909|gb|ACY88794.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158442|emb|CBW17951.1| motility protein B [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312912916|dbj|BAJ36890.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085458|emb|CBY95239.1| Chemotaxis protein motB Motility protein B [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321224566|gb|EFX49629.1| Flagellar motor rotation protein MotB [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322616922|gb|EFY13830.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618161|gb|EFY15053.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625831|gb|EFY22650.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322626283|gb|EFY23093.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632697|gb|EFY29442.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322639041|gb|EFY35734.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640481|gb|EFY37134.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646010|gb|EFY42527.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322655476|gb|EFY51784.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660255|gb|EFY56493.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322668121|gb|EFY64280.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322674119|gb|EFY70213.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322675527|gb|EFY71601.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322683059|gb|EFY79075.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686753|gb|EFY82731.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322714975|gb|EFZ06546.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323130206|gb|ADX17636.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323195356|gb|EFZ80536.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323199248|gb|EFZ84343.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323204163|gb|EFZ89175.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323211878|gb|EFZ96707.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323217488|gb|EGA02207.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221977|gb|EGA06366.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323231510|gb|EGA15623.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235952|gb|EGA20031.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240522|gb|EGA24565.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323245414|gb|EGA29414.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323250185|gb|EGA34077.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323253633|gb|EGA37461.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258567|gb|EGA42233.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259386|gb|EGA43023.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323266189|gb|EGA49679.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|326622909|gb|EGE29254.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326627426|gb|EGE33769.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332988815|gb|AEF07798.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 309
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 67/184 (36%), Gaps = 20/184 (10%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMI 72
+++ + N ++ + S L+K + ++ I + + G I
Sbjct: 92 TQQQGEVEKQPNIDELKKRMEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRI 151
Query: 73 TC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
+ +E +L+ IA +LN P+ I++ HTD +
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPN-RISLAGHTDDFPYANGEKGYS 210
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + + V G A + N+RI + + +
Sbjct: 211 NWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNK 268
Query: 186 GNIK 189
+
Sbjct: 269 QAEQ 272
>gi|16760871|ref|NP_456488.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141437|ref|NP_804779.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213163277|ref|ZP_03348987.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213622329|ref|ZP_03375112.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|25298889|pir||AF0746 motility protein B [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16503168|emb|CAD05673.1| motility protein B [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29137064|gb|AAO68628.1| motility protein B [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
Length = 309
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 67/184 (36%), Gaps = 20/184 (10%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMI 72
+++ + N ++ + S L+K + ++ I + + G I
Sbjct: 92 TQQQGEVEKQPNIDELKKRMEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRI 151
Query: 73 TC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
+ +E +L+ IA +LN P+ I++ HTD +
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPN-RISLAGHTDDFPYANGEKGYS 210
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + + V G A + N+RI + + +
Sbjct: 211 NWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNK 268
Query: 186 GNIK 189
+
Sbjct: 269 QAEQ 272
>gi|146281853|ref|YP_001172006.1| chemotaxis protein MotB-related protein [Pseudomonas stutzeri
A1501]
gi|145570058|gb|ABP79164.1| chemotaxis protein MotB-related protein [Pseudomonas stutzeri
A1501]
Length = 254
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 68/214 (31%), Gaps = 39/214 (18%)
Query: 5 LGLSMFIMTTISG---------CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+ ++ ++ ++ E++ F + + + + LD+A + +
Sbjct: 24 IMSALLVIFILASVILILQLMDIQQKLEERQVQFEQEIEELKKAEQVRRTILDEAVEALR 83
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHV--SFVSEVFLEKKFLPMLQLIATILNKFPST---- 109
+ GI V + IP + + + I ++N+ S
Sbjct: 84 RR----GIKVEVSENHTVLSIPNDLLGFDTGAYEIHSAYQARALEIGKVINEVISRDDRV 139
Query: 110 ----VIAIQSHTDSIG----TLKNNLLISQERADVIKSYL-----------IQRGVSSNR 150
I I+ HTD+ K N +S RA + +
Sbjct: 140 EFLDTIFIEGHTDNRPLPGFMGKGNWGLSTFRAISLWQFWGDALAREEQLSRLNNKDGKP 199
Query: 151 FISVRGFAYKYP-IDTNDTKVGRQNNQRIEIQIF 183
SV G+ P + T+ + N+RI+I+
Sbjct: 200 LFSVSGYGETRPAVADQVTEEDFKRNRRIDIRFT 233
>gi|115375610|ref|ZP_01462867.1| putative outer membrane lipoprotein [Stigmatella aurantiaca
DW4/3-1]
gi|115367386|gb|EAU66364.1| putative outer membrane lipoprotein [Stigmatella aurantiaca
DW4/3-1]
Length = 206
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 20/184 (10%)
Query: 2 IKELGLSMFIMTT--ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K L +++ ++ ++ + KK S T K + +
Sbjct: 38 LKALCMAVSLLAVPGMALAQSPVEQFKKAAGKASKST---------LEKKINTKLTEDAR 88
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
D++ + ++ + + L A + + + HTDS
Sbjct: 89 KNQCSFKTGTDVLEAGCDQKLKNLTAALV--EAKKQLD--AGGVKNY---QFEVSGHTDS 141
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQRI 178
G N +S++RA VI L+ RG+ ++V G + P+ +DT + N+R
Sbjct: 142 SGDAAKNKALSEKRAAVIVKELVSRGIPRAEILAV-GRGSEQPLVKPDDTAAKKAKNRRY 200
Query: 179 EIQI 182
EIQ+
Sbjct: 201 EIQV 204
>gi|330501613|ref|YP_004378482.1| flagellar motor protein MotB [Pseudomonas mendocina NK-01]
gi|328915900|gb|AEB56731.1| flagellar motor protein MotB [Pseudomonas mendocina NK-01]
Length = 334
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 52/143 (36%), Gaps = 9/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+ E Q +++ G I + + + L+ F +L +A +
Sbjct: 135 EENPELQRFKDQILFEITQDGLRIQIMDAENRPMFALGSAELQPYFEDILLAMADTIRAV 194
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I+I HTD+ N +S RA+ + L+ G + V G+A
Sbjct: 195 PN-KISISGHTDAKPFAGRGDFGNWELSSNRANAARRTLVAGGYPDEQVARVVGYASSA- 252
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
+ N+RI+I + +
Sbjct: 253 LFDRADPFN-PVNRRIDIVVLTK 274
>gi|167894145|ref|ZP_02481547.1| ompA family protein [Burkholderia pseudomallei 7894]
Length = 277
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 73 TCYIPVHVSFVSEV----FLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNN 126
+P F + + L + + + + +TD +G+ ++N
Sbjct: 154 RVELPTDTLFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLIVTGYTDRLGSDEHN 213
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEI 180
+S ERA + Y+I I+ G P+ + Q N+R+EI
Sbjct: 214 ARLSSERARTVADYMIAE-GIPAAKITAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEI 272
Query: 181 QI 182
+I
Sbjct: 273 RI 274
>gi|126452529|ref|YP_001066330.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|134277725|ref|ZP_01764440.1| ompA family protein [Burkholderia pseudomallei 305]
gi|217421747|ref|ZP_03453251.1| ompA family protein [Burkholderia pseudomallei 576]
gi|237812370|ref|YP_002896821.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|242318072|ref|ZP_04817088.1| ompA family protein [Burkholderia pseudomallei 1106b]
gi|254179713|ref|ZP_04886312.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|126226171|gb|ABN89711.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|134251375|gb|EBA51454.1| ompA family protein [Burkholderia pseudomallei 305]
gi|184210253|gb|EDU07296.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|217395489|gb|EEC35507.1| ompA family protein [Burkholderia pseudomallei 576]
gi|237502710|gb|ACQ95028.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|242141311|gb|EES27713.1| ompA family protein [Burkholderia pseudomallei 1106b]
Length = 254
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 73 TCYIPVHVSFVSEV----FLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNN 126
+P F + + L + + + + +TD +G+ ++N
Sbjct: 131 RVELPTDTLFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLIVTGYTDRLGSDEHN 190
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEI 180
+S ERA + Y+I I+ G P+ + Q N+R+EI
Sbjct: 191 ARLSSERARTVADYMIAE-GIPAAKITAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEI 249
Query: 181 QI 182
+I
Sbjct: 250 RI 251
>gi|116250495|ref|YP_766333.1| flagellar motor protein MotB [Rhizobium leguminosarum bv. viciae
3841]
gi|115255143|emb|CAK06217.1| putative motility protein [Rhizobium leguminosarum bv. viciae 3841]
Length = 443
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 63/174 (36%), Gaps = 13/174 (7%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD---TGIVVSRIGDMITCY 75
+ +K + +T+ K+ L + + G+ V+ +
Sbjct: 268 AQKDADHQKDADKSAAETEQQQKKEAEQLQAQIAQQIGGVAGKLAEGLTVTASEGGLLVS 327
Query: 76 I----PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT---DSIGTLKNNLL 128
I + + ++ + ++ I IL + +AI+ HT GT N
Sbjct: 328 ISDQTDDSMFNIGSAVPRQEMVLAMEKIGAILKERGGA-VAIRGHTDGRQYKGTQNENWR 386
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S +RA L++ G+ R V GFA + +D N+RIEI +
Sbjct: 387 LSMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLPSDPF--NATNRRIEILV 438
>gi|327480088|gb|AEA83398.1| chemotaxis protein MotB-related protein [Pseudomonas stutzeri DSM
4166]
Length = 254
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 68/214 (31%), Gaps = 39/214 (18%)
Query: 5 LGLSMFIMTTISG---------CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+ ++ ++ ++ E++ F + + + + LD+A + +
Sbjct: 24 IMSALLVIFILASVILILQLMDIQQKLEERQVQFEQEIEELKKAEQVRRTILDEAVEALR 83
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHV--SFVSEVFLEKKFLPMLQLIATILNKFPST---- 109
+ GI V + IP + + + I ++N+ S
Sbjct: 84 RR----GIKVEVSENHTVLSIPNDLLGFDTGAYEIHSAYQARALEIGKVINEVISRDDRV 139
Query: 110 ----VIAIQSHTDSIG----TLKNNLLISQERADVIKSYL-----------IQRGVSSNR 150
I I+ HTD+ K N +S RA + +
Sbjct: 140 EFLDTIFIEGHTDNRPLQGFMGKGNWGLSTFRAISLWQFWGDALAREEQLSRLNNKDGKP 199
Query: 151 FISVRGFAYKYP-IDTNDTKVGRQNNQRIEIQIF 183
SV G+ P + T+ + N+RI+I+
Sbjct: 200 LFSVSGYGETRPAVADQVTEEDFKRNRRIDIRFT 233
>gi|227112504|ref|ZP_03826160.1| flagellar motor protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|227326903|ref|ZP_03830927.1| flagellar motor protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 351
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 70/190 (36%), Gaps = 19/190 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRI 68
G G ++ ++ K L++ + ++ +++ I
Sbjct: 83 GGGNDPTQQDGEVKKAIKTDNVEKKLDEVRLNRLRERLDQLIEADPRLRALRPHLLIEMI 142
Query: 69 GDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + I + +E +L+ IA ILN FP+ ++I HTD +
Sbjct: 143 DEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIAPILNDFPN-KLSISGHTDDVQYTT 201
Query: 125 -----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+N +S +RA+ + LI G+S + + V G A + T N+RI
Sbjct: 202 GERGYSNWELSADRANASRRELIFGGLSDGKVLRVVGMAATMSL-KQATGGNDAINRRIS 260
Query: 180 IQIFPRGNIK 189
+ + R K
Sbjct: 261 LLVLSRQAQK 270
>gi|146305660|ref|YP_001186125.1| flagellar motor protein MotB [Pseudomonas mendocina ymp]
gi|145573861|gb|ABP83393.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 329
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 9/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+ E Q +++ G I + + + L+ F +L +A +
Sbjct: 133 EENPELQRFKDQILFEITQDGLRIQIVDAENRPMFALGSANLQPYFEDILLAMADTIRAV 192
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I+I HTD+ N +S RA+ + LI G + + V G+A
Sbjct: 193 PN-KISISGHTDAKPFVGRGDFGNWELSANRANAARRALIAGGYADEQVARVVGYASSAL 251
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
D ND N+RI+I + +
Sbjct: 252 FDRNDPF--NPVNRRIDIVVLTK 272
>gi|288225943|gb|ADC44456.1| OmpA [Enterobacter sp. i1]
Length = 111
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + +TD IG+ N +S+ RA
Sbjct: 24 SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRA 83
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ YLI + IS RG P+
Sbjct: 84 QSVVDYLISK-GIPADKISARGMGESNPV 111
>gi|83954367|ref|ZP_00963087.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp.
NAS-14.1]
gi|83841404|gb|EAP80574.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp.
NAS-14.1]
Length = 665
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/164 (13%), Positives = 52/164 (31%), Gaps = 16/164 (9%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ ++ + L + T + + + + + +
Sbjct: 506 ASQQNEEALRAALQTQLRGDQAQRYSLRQVRDVRQVRALAP----------EIELDAVRF 555
Query: 82 FVSEVFLEKKFLPMLQLIA----TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ + L I + P TVI ++ HTD++G NL +S RA+ +
Sbjct: 556 ATGSAAIQPEQARALSKIGTAISNAIKDDPRTVILVEGHTDAVGNAGYNLALSDRRAETV 615
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L + + +G+ +T N+R ++
Sbjct: 616 ALALTEYFDVPPANLITQGYGESALKVPTETAE--PANRRAVVR 657
>gi|330807221|ref|YP_004351683.1| Chemotaxis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375329|gb|AEA66679.1| Chemotaxis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 344
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 61/174 (35%), Gaps = 12/174 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
E+ + + + + + + +K E+ Q+Q I+ + + I
Sbjct: 103 TTDTEQVEG-MAEQIERERLELLLQELQNKVEENPQLQKFKDQILFEITPNGLRIQIMDA 161
Query: 80 ----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQ 131
+ L+ F +L +A + P+ I+I HTD+ N +S
Sbjct: 162 ENRPMFDSGSARLKPYFEDILLAMADTIKAVPN-KISISGHTDAKPYVGKGDFGNWELSA 220
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA+ + L+ + V G+A + N+RI+I + +
Sbjct: 221 NRANAARRALVAGSYPDEQVARVVGYASSA-LFDRKDPFN-PVNRRIDIVVLTK 272
>gi|269960142|ref|ZP_06174518.1| chemotaxis LafU protein [Vibrio harveyi 1DA3]
gi|269835113|gb|EEZ89196.1| chemotaxis LafU protein [Vibrio harveyi 1DA3]
Length = 330
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 60/172 (34%), Gaps = 22/172 (12%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDE----------FQMQLQDTGIVVSRIGDMITCYIPVHV 80
D ++ + D E + V+ + +
Sbjct: 107 QGDGDGPEIDSLIPGNFDTQEQLALLAKVIDEVVGQISAQGNVNVTITPQGLRIVLQDDY 166
Query: 81 ----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQ 131
L F +L +A + + + +I I HTDS ++N +S
Sbjct: 167 KQHMFSRGGAELTPFFEDLLLALAPVFERISNPLI-ISGHTDSTPFKKRFGRQSNWALSA 225
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RADV ++ L++ G+ +R + V G + + ++ + N+RIE+ I
Sbjct: 226 SRADVARNTLVEGGMPDDRVMQVTGMSDRALLNPEEPDS--SENRRIELFIL 275
>gi|259416355|ref|ZP_05740275.1| outer membrane protein, OmpA/MotB family [Silicibacter sp.
TrichCH4B]
gi|259347794|gb|EEW59571.1| outer membrane protein, OmpA/MotB family [Silicibacter sp.
TrichCH4B]
Length = 624
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + L + L + P+ V I+ HTD++G NL +
Sbjct: 505 INVDKVTFETGSSVIRPEQAEELTDLGNALRQMVDTNPTEVFLIEGHTDAVGAATYNLAL 564
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA+ + L + + ++G+ + N+R+ + +I P
Sbjct: 565 SDRRAETVALALTEYFDVPPENMVIQGYGESDLAVPVLDAE--RANRRVTVRRITP 618
>gi|323445947|gb|EGB02315.1| hypothetical protein AURANDRAFT_68995 [Aureococcus anophagefferens]
Length = 664
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 30/100 (30%), Gaps = 5/100 (5%)
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-KNNLLISQERADVIKSYLIQ 143
+ +L +A +L + P V+ ++ H + + +
Sbjct: 80 SSDVTDGSAGVLDAVARVLAERPHLVVRVEGHCCTSPMWGSTTIEELAADRAEAVVAALA 139
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ RGF P+ ++ N+R E +
Sbjct: 140 ARGVPRDQLRPRGFGADLPV----DVANKRLNRRTEFHVV 175
>gi|189179675|dbj|BAG39456.1| outer membrane protein [Gluconacetobacter intermedius]
Length = 405
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 7/110 (6%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH------TDSIGTLKNNLLISQE 132
L + ++ A +T I + + + N+ +S
Sbjct: 296 VFFDWDGAALTGRSREIVAQAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEQYNMGLSMR 355
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RAD +K+ LI R I + G+ +P+ N+R+EI +
Sbjct: 356 RADSVKAELI-RDGVPASGIDIHGYGEAHPMVPTGPDTREPQNRRVEIIL 404
>gi|39935079|ref|NP_947355.1| putative chemotaxis protein motB1 [Rhodopseudomonas palustris
CGA009]
gi|192290612|ref|YP_001991217.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
gi|39648930|emb|CAE27451.1| putative chemotaxis protein motB1 [Rhodopseudomonas palustris
CGA009]
gi|192284361|gb|ACF00742.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
Length = 274
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 61/175 (34%), Gaps = 19/175 (10%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMITCYI 76
K + + +N + A + LQ+ I+ + I
Sbjct: 91 TAKPSPGEVTRDEGINTKEDREFALASASLRQALQNMPEISELSKNIMFEETKQGLNLEI 150
Query: 77 ---PVHVSFVSEVFLE-KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN----LL 128
F + ++ +LQ +A L P + I HT S + +
Sbjct: 151 MDQDGRSMFADGSKVPFERTRLLLQRLAVPLRATP-LRVTIVGHTSSGLMPERSDYNGWD 209
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S +RA+ ++ L + G+ + +V G A P+ +D + N+R+ I +
Sbjct: 210 LSSDRANSVRQILEREGLPGSHIFAVTGKADSQPLFPDDPSI--AANRRVTITLM 262
>gi|254297563|ref|ZP_04965016.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|157807731|gb|EDO84901.1| ompA family protein [Burkholderia pseudomallei 406e]
Length = 254
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 73 TCYIPVHVSFVSEV----FLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNN 126
+P F + + L + + + + +TD +G+ ++N
Sbjct: 131 RVELPTDTLFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLIVTGYTDRLGSDEHN 190
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------GRQNNQRIEI 180
+S ERA + Y+I I+ G P+ + Q N+R+EI
Sbjct: 191 ARLSSERARTVADYMIAE-GIPAAKITAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEI 249
Query: 181 QI 182
+I
Sbjct: 250 RI 251
>gi|218675467|ref|ZP_03525136.1| flagellar motor protein MotB [Rhizobium etli GR56]
Length = 436
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 14/167 (8%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
AS ++KK + ++ G K + + + G++VS
Sbjct: 278 AAASEQQKKEA---DALQAQIAQQIGGVAGKLAEGLTVTAAEGGLLVSISDQN-----DD 329
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT---DSIGTLKNNLLISQERAD 135
+ + ++ + ++ I TIL + +AI+ HT G N +S +RA
Sbjct: 330 SMFNIGSAVPRQEMVLAMERIGTILKERGGA-VAIRGHTDGRQYKGAQNENWRLSMDRAQ 388
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L++ G+ R V GFA + D N+RIEI +
Sbjct: 389 SAYYMLVRGGLDEKRISQVSGFADRRLKLPADPF--NAANRRIEILV 433
>gi|167647023|ref|YP_001684686.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
gi|167349453|gb|ABZ72188.1| OmpA/MotB domain protein [Caulobacter sp. K31]
Length = 299
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 69/186 (37%), Gaps = 20/186 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGD 70
G +S + D + K+ S A + LQD I++ + +
Sbjct: 113 GQSSTSASLDSASEEALRDALAKKEQDSFASAAQSLRQSLQDMPELAELSKQIMIDQTPE 172
Query: 71 MITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI---GTL 123
+ + + + + +L+ IA I+N+ P+ I I HT +
Sbjct: 173 GLRIQLIDQDGRSMFKENSREPNDRARILLRAIAKIINQLPN-RITISGHTSASAAGKRA 231
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI-DTNDTKVGRQNNQRIEIQI 182
++ +S ERAD + L GV +R V G A P+ + T G N+RI I +
Sbjct: 232 DSDWALSAERADASRQVLRGAGVDEDRIYQVSGKANSEPLYADDPTLAG---NRRISIVL 288
Query: 183 FPRGNI 188
+
Sbjct: 289 LREKPV 294
>gi|120597323|ref|YP_961897.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|120557416|gb|ABM23343.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
Length = 305
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 62/169 (36%), Gaps = 20/169 (11%)
Query: 32 KSNDTDIVNKRFGSSLDKAED------EFQMQLQDT----GIVVSRIGDMITCYIPVHV- 80
+ D E + +Q + I V+ + I I +V
Sbjct: 105 AGAEGIEEGALIPGQFDTQEQLTVLARQLNRVVQSSSMAENITVTIVPQGIRILIHDNVN 164
Query: 81 ---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL---KNNLLISQERA 134
++ F +L + IL ++++ I HTDS N +S ERA
Sbjct: 165 RFMFTRGSAQMQPYFEELLLSLGPILKNITNSMV-ISGHTDSTPYAGSLFTNWELSSERA 223
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + L + GV ++ I V G A + P T+DT N+RIE I
Sbjct: 224 LLARRVLERGGVKRDQVIQVTGMADQVPYITSDTAA--AANRRIEALIL 270
>gi|153832073|ref|ZP_01984740.1| OmpA family protein [Vibrio harveyi HY01]
gi|148871688|gb|EDL70529.1| OmpA family protein [Vibrio harveyi HY01]
Length = 1563
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 13/109 (11%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
V ++ L L + L+K P+ V+ I+ H G + N +SQ+RA +
Sbjct: 629 VFPFDNNQVQAPHLSYLAAVDKELSKIPNAVVEIEGHACQNGDSEYNQNLSQQRAQHVAE 688
Query: 140 YLIQRGVSSNRFISVRGFAYKYPID---TNDTKVGRQN---NQRIEIQI 182
+ +R F + PI N+ K N+R+E++I
Sbjct: 689 FFSSVSD-------IRFFGERRPIVEVPNNEIKRENAQLNINRRVEVRI 730
>gi|88607299|ref|YP_504946.1| OmpA family protein [Anaplasma phagocytophilum HZ]
gi|88598362|gb|ABD43832.1| OmpA family protein [Anaplasma phagocytophilum HZ]
Length = 205
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 49/123 (39%), Gaps = 10/123 (8%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + L+ ++ + L + S + + H D+ GT + +L + ++RA+
Sbjct: 47 VEKVYFDIGKYDLKGPGKKVILELVEQLRQDDSMYLVVIGHADATGTEEYSLALGEKRAN 106
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYP---IDTNDTKV---GRQNNQRIEIQI----FPR 185
+K ++I S ++ + P + + D + N+R I + PR
Sbjct: 107 AVKQFIIGCDKSLAPRVTTQSRGKAEPEVLVYSTDAQEVEKANAQNRRAVIVVEFAHIPR 166
Query: 186 GNI 188
+
Sbjct: 167 SGV 169
>gi|269963847|ref|ZP_06178160.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831420|gb|EEZ85566.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 1563
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 13/109 (11%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
V ++ L L + L+K P+ V+ I+ H G + N +SQ+RA +
Sbjct: 629 VFPFDNNQVQAPHLSYLAAVDKELSKIPNAVVEIEGHACQNGDSEYNQNLSQQRAQHVAE 688
Query: 140 YLIQRGVSSNRFISVRGFAYKYPID---TNDTKVGRQN---NQRIEIQI 182
+ +R F + PI N+ K N+R+E++I
Sbjct: 689 FFSSVSD-------IRFFGERRPIVEVPNNEIKRENAQLNINRRVEVRI 730
>gi|83592206|ref|YP_425958.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
gi|83575120|gb|ABC21671.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
Length = 220
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 8/105 (7%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ ++ + K LP L I T+L + + ++ I+ HTD+ G NL +S++RA+ +
Sbjct: 118 LFEINSAEILVKSLPYLNQIGTLLREESALILVIEGHTDANGPSDYNLALSRKRAEAVAD 177
Query: 140 YLIQRGVSSNRFISVRGFAYK---YPIDTNDTKVGRQNNQRIEIQ 181
YLI + G P N+R++
Sbjct: 178 YLIGSFAIPPARLRTEGKGESALLRPSSPTHPD-----NRRVQFY 217
>gi|256824209|ref|YP_003148169.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Kytococcus sedentarius DSM 20547]
gi|256687602|gb|ACV05404.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Kytococcus sedentarius DSM 20547]
Length = 437
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 57/173 (32%), Gaps = 13/173 (7%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
S + + E + V++I D+ P
Sbjct: 267 TTSEPSPSATSEPAPSVTSEPTKTPDPSRTDEPGPDPSVDPGLAAVNKIEDLTCKNAPAS 326
Query: 80 V----------SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ S L + I L + + HTDS+G + N +
Sbjct: 327 MKGISAAYPMRFPSSSDALYGESAVNAARIGEKLAGC-DFDVVVVGHTDSVGG-EVNERL 384
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S RA+ I L+ GV +R + PI +N+T+ GR N+R+EI +
Sbjct: 385 SAFRAEKIAQALVVAGVDFDRIQQSNA-SASQPIASNETEDGRAKNRRVEILV 436
>gi|92119081|ref|YP_578810.1| OmpA/MotB [Nitrobacter hamburgensis X14]
gi|91801975|gb|ABE64350.1| OmpA/MotB [Nitrobacter hamburgensis X14]
Length = 673
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + L++IA +N+ PS V I+ HTD++G +NL +
Sbjct: 545 IDLDTITFATGSWDIPPDQAAKLRVIADGINRAISRNPSEVFLIEGHTDAVGNDVDNLSL 604
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA L Q+ + +G+ + D + N+R+ + +I P
Sbjct: 605 SDRRAQSAAELLTQQFQVPPENLVTQGYGEQNLKVETDGPS--RENRRVTVRRITP 658
>gi|221069302|ref|ZP_03545407.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
gi|220714325|gb|EED69693.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
Length = 353
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 59/154 (38%), Gaps = 13/154 (8%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+ L++ + + ++ G+++ + D + ++ +L+ I
Sbjct: 139 ANNARLNEFRSQIRTEITHDGLMIQIVDDQ-----NRPMFDSGSAVVKPYMRDILREIGA 193
Query: 102 ILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ I++ HTD+ +N +S +RA+ + L+ G+ ++ V G
Sbjct: 194 AM-GNAENRISLSGHTDAAPYGNADRGYSNWELSADRANASRRELVSAGMPLDKLARVVG 252
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + + + N+RI I + + ++
Sbjct: 253 MSSSDLLLPEEPRA--AQNRRITITVLTKEAERR 284
>gi|146294532|ref|YP_001184956.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|145566222|gb|ABP77157.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
Length = 305
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 62/169 (36%), Gaps = 20/169 (11%)
Query: 32 KSNDTDIVNKRFGSSLDKAED------EFQMQLQDT----GIVVSRIGDMITCYIPVHV- 80
+ D E + +Q + I V+ + I I +V
Sbjct: 105 AGAEGIEEGALIPGQFDTQEQLTVLARQLNRVVQSSSMAENITVTIVPQGIRILIHDNVN 164
Query: 81 ---SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL---KNNLLISQERA 134
++ F +L + IL ++++ I HTDS N +S ERA
Sbjct: 165 RFMFTRGSAQMQPYFEELLLSLGPILKNITNSMV-ISGHTDSTPYAGSLFTNWELSSERA 223
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + L + GV ++ I V G A + P T+DT N+RIE I
Sbjct: 224 LLARRVLERGGVKRDQVIQVTGMADQVPYITSDTAA--AANRRIEALIL 270
>gi|83943232|ref|ZP_00955692.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp.
EE-36]
gi|83846240|gb|EAP84117.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp.
EE-36]
Length = 665
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/164 (13%), Positives = 52/164 (31%), Gaps = 16/164 (9%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
+ ++ + L + T + + + + + +
Sbjct: 506 ASQQNEEALRAALQTQLRGDQAQRYSLRQVRDVRQVRALAP----------EIELDAVRF 555
Query: 82 FVSEVFLEKKFLPMLQLIA----TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ + L I + P TVI ++ HTD++G NL +S RA+ +
Sbjct: 556 ATGSAAIQPEQARALSKIGTAISNAIKDDPRTVILVEGHTDAVGNAGYNLALSDRRAETV 615
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L + + +G+ +T N+R ++
Sbjct: 616 ALALTEYFDVPPANLITQGYGESALKVPTETAE--PANRRAVVR 657
>gi|167576627|ref|ZP_02369501.1| Chemotaxis lafU protein [Burkholderia thailandensis TXDOH]
Length = 311
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 45/132 (34%), Gaps = 10/132 (7%)
Query: 60 DTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI-- 113
+ + + D + I + L +F+ +L + +L + ++ +
Sbjct: 134 NGNVATAINDDGVRITIHDSDKQGMFERRSDALNPQFVRLLTALVPVLGTVTNKMVIVGH 193
Query: 114 --QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ NN +S RA + L G+ + R + G P ++
Sbjct: 194 TDATQYADTSVFSNNWNLSSRRALRARQILADGGMDAQRMFQISGMGDSVPAVPDNPD-- 251
Query: 172 RQNNQRIEIQIF 183
N+R+E+ +
Sbjct: 252 HDMNRRVELLLL 263
>gi|209809116|ref|YP_002264654.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
gi|208010678|emb|CAQ81065.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
Length = 275
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 2/140 (1%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMIT-CYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ + E ++G + I + + L K++ L + +L
Sbjct: 127 DYVKRQETCQPPSDSNSGNSDIELAQKIYDLLNKDNQFAFNSAELNPKYVVNLSEASQLL 186
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
K + I H D+IG N ++ ERA +K + + I V P
Sbjct: 187 KKHEDFKLLITGHADAIGEEDGNQELAIERAKQVKR-YLSIFGLALNRIHVDAVGSNDPY 245
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
R N+R+ I++
Sbjct: 246 FEGTEPHVRLTNRRVTIELL 265
>gi|253688988|ref|YP_003018178.1| OmpA/MotB domain protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755566|gb|ACT13642.1| OmpA/MotB domain protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 350
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 70/190 (36%), Gaps = 19/190 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRI 68
G G ++ ++ K L++ + ++ +++ I
Sbjct: 83 GGGNDPTQQDGEVKKAIKTDNVEKKLDEVRLNRLRERLDQLIEADPRLRALRPHLLIEMI 142
Query: 69 GDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
+ + I + +E +L+ IA ILN FP+ ++I HTD +
Sbjct: 143 DEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIAPILNDFPN-KLSISGHTDDVQYTT 201
Query: 125 -----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+N +S +RA+ + LI G+S + + V G A + T N+RI
Sbjct: 202 GERGYSNWELSADRANASRRELIFGGLSDGKVLRVVGMAATMNL-KQATGGNDAINRRIS 260
Query: 180 IQIFPRGNIK 189
+ + R K
Sbjct: 261 LLVLSRQAQK 270
>gi|331665946|ref|ZP_08366840.1| hypothetical protein ECMG_03823 [Escherichia coli TA143]
gi|331056997|gb|EGI28991.1| hypothetical protein ECMG_03823 [Escherichia coli TA143]
Length = 159
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 53/152 (34%), Gaps = 20/152 (13%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPS--TVI 111
+QD + + + P + + L+ KF +L +L+ + T +
Sbjct: 1 MQDWDAEIDKQTLEVRFKSPDVLFGLGSTELKPKFKLILDDFFPRYLKVLDNYQEHITEV 60
Query: 112 AIQSHTDSIGT--------LKNNLLISQERADVIKSY------LIQRGVSSNRFISVRGF 157
I+ HT + T NN+ +SQ R + Y + + G+
Sbjct: 61 RIEGHTSTDWTGTTNPDIAYFNNMALSQGRTRAVLQYVYDIKNIATHQQWVKSKFAAVGY 120
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ +PI K ++R+ ++ ++
Sbjct: 121 SSAHPILDKTGKEDPNRSRRVTFKVVTNAELQ 152
>gi|76789924|gb|ABA55070.1| OmpA family protein [Riemerella anatipestifer]
Length = 384
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 3/105 (2%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V L + ++ A T + + HTD+ G N +S RA +
Sbjct: 279 VVYFDFDRSDLTAEARSVVTQAANYAKSGAPTRVLVVGHTDTSGNAAYNQGLSNRRARTV 338
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR--IEI 180
L+ + + IS+ G P V N+R ++I
Sbjct: 339 ADALVAQ-GVNGGVISLDGKGETQPAKATGDGVREPLNRRATVDI 382
>gi|163795725|ref|ZP_02189690.1| OmpA/MotB [alpha proteobacterium BAL199]
gi|159179021|gb|EDP63556.1| OmpA/MotB [alpha proteobacterium BAL199]
Length = 313
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 6/141 (4%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ + +Q T + + + + + L + +
Sbjct: 164 EALKAAMQPTNVTYETVQQEVA--RNTVYFDWDKDTIRPDQQAALDKFLAEMKAIGPVTL 221
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN--RFISVRGFAYKYPIDTNDTK 169
I+ HTD+ G N +S+ RA+ +++ L Q+G++ + + +
Sbjct: 222 YIEGHTDTSGPNDYNAELSRRRAENVRTDLRQQGMTVGEVKDLQLLAKGENDLAVATGDG 281
Query: 170 VGRQNNQRIEIQIFPRGNIKK 190
V Q N+R+ I G KK
Sbjct: 282 VKEQQNRRV--VIIATGQTKK 300
>gi|330831536|ref|YP_004394488.1| outer membrane protein A [Aeromonas veronii B565]
gi|328806672|gb|AEB51871.1| Outer membrane protein A [Aeromonas veronii B565]
Length = 364
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 13/117 (11%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATIL-NKFP-STVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ L + + + P V + +TD IG+ NL +S++RA
Sbjct: 242 SDVLFEFNKATLKPAANQALDALFSQIVAANPKDGVATVIGYTDRIGSDNYNLALSEKRA 301
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN---------NQRIEIQI 182
+ SYL+ + + V G P+ T + R ++R+EI +
Sbjct: 302 QSVASYLVSK-GLYADKVRVEGRGKANPV-TGSSCASRSKQELIACLAPDRRVEIHL 356
>gi|34499026|ref|NP_903241.1| outer membrane protein A [Chromobacterium violaceum ATCC 12472]
gi|34104876|gb|AAQ61233.1| outer membrane protein A precursor [Chromobacterium violaceum ATCC
12472]
Length = 226
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 71/220 (32%), Gaps = 45/220 (20%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-----SLDKAEDEFQ 55
M K+L LS + + ++ K + + + +G DKA+D
Sbjct: 1 MTKQLKLSALVAALLV--SASAFAAKPGYAVDQSTDAVTRNSYGECWKTTYFDKAKDGLV 58
Query: 56 MQLQDTGIV-VSRIGDMITCYIPVHV-------SFVSEVFLEKKFLPMLQLIATILNKFP 107
V+ + V ++ L L + L
Sbjct: 59 ECGDREAAKPVAEAPKPALVSVKEKVTLSAKVLFDFNKSVLRADAKNELDPLVAKLKAHA 118
Query: 108 S----TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV-RGFAYKYP 162
+ + +TD +G+ K N +SQ RAD +K+Y + GV + + S+ +G A
Sbjct: 119 GKGYLNGVEVDGYTDFMGSDKLNNALSQNRADAVKAYFVNAGVPAEKVTSIGKGKAEAK- 177
Query: 163 IDTNDTKVGRQN--------------------NQRIEIQI 182
T+ + ++R+E+ I
Sbjct: 178 ----MTEECKAKFPKYAKNKKQNAEIKACIESDRRVEVTI 213
>gi|237653884|ref|YP_002890198.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
gi|237625131|gb|ACR01821.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
Length = 330
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 53/145 (36%), Gaps = 10/145 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + I + G I + + + L +L+ IA LN
Sbjct: 149 EANPSLRQFKNQLLIDIVSEGLRIQLVDAQNRPMFTSASAELRPYTRELLREIAAALNDV 208
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+++ HTDS +N +S RA+ + L+ G+ + + + V G A
Sbjct: 209 -DNRVSMSGHTDSAQYAGGERGFSNWELSSNRANAARRELVAGGLEAGKMLRVVGLADTA 267
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRG 186
++ D N+RI I + R
Sbjct: 268 HLNPGDPLD--PANRRISIVVLNRA 290
>gi|83717140|ref|YP_438356.1| chemotaxis lafU protein [Burkholderia thailandensis E264]
gi|167614802|ref|ZP_02383437.1| Chemotaxis lafU protein [Burkholderia thailandensis Bt4]
gi|257141387|ref|ZP_05589649.1| chemotaxis lafU protein [Burkholderia thailandensis E264]
gi|83650965|gb|ABC35029.1| Chemotaxis lafU protein [Burkholderia thailandensis E264]
Length = 311
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 10/132 (7%)
Query: 60 DTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI-- 113
D + + D + I + L +F+ +L + +L + ++ +
Sbjct: 134 DGNVATAINDDGVRITIHDSDKQGMFERRSDALNPQFVRLLTALVPVLGTVTNKMVIVGH 193
Query: 114 --QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ NN +S RA + L G+ R + G P ++
Sbjct: 194 TDATQYADTSVFSNNWNLSSRRALRARQILADGGMDVQRMFQISGMGDSVPAVPDNP--N 251
Query: 172 RQNNQRIEIQIF 183
N+R+E+ +
Sbjct: 252 HDMNRRVELLLL 263
>gi|254487991|ref|ZP_05101196.1| OmpA domain protein [Roseobacter sp. GAI101]
gi|214044860|gb|EEB85498.1| OmpA domain protein [Roseobacter sp. GAI101]
Length = 520
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L+ + +Q +A L ++ + + +D G + N I+ RA+ ++
Sbjct: 413 FEAGSIRLDAQSRSNVQQLARALEIGQYDARRLLFVGFSDGDGAGRANREIALRRAEAVR 472
Query: 139 SYLIQRGV---SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+I+ V + V F P+ +D+ GRQ N+R+E+ +
Sbjct: 473 RAVIKAAVTANLDRVTLDVDAFGEAMPMACDDSAWGRQANRRVEVWV 519
>gi|91777230|ref|YP_552438.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
LB400]
gi|91689890|gb|ABE33088.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 372
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 51/150 (34%), Gaps = 12/150 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDT-GIVVSRIGDMITCYIPVHVSFV--SEVFLEKKFLPMLQ 97
+ + V + +T F + L
Sbjct: 195 DGVEKGMPGVAAALEACTPPPVAATVPAVPQKMTLQADATFRFDRGDLAGMLPAGKAKLD 254
Query: 98 LIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ L + T I I +TD +G+ N +S +RA+ +K YL+ GV++ IS RG
Sbjct: 255 ELVRNLKQADDVTSIRIDGYTDRLGSDSYNRQLSAKRAETVKRYLLSGGVTAP--ISARG 312
Query: 157 FAYKYPIDTNDT------KVGRQNNQRIEI 180
+ P+ + N+R+E+
Sbjct: 313 RGKEDPVVQCNDHNREALIACLAPNRRVEL 342
>gi|149912029|ref|ZP_01900622.1| sodium-type flagellar protein MotY [Moritella sp. PE36]
gi|149804890|gb|EDM64925.1| sodium-type flagellar protein MotY [Moritella sp. PE36]
Length = 293
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L ++ L +I L P V+ + S+T S G NL S RA+ IK
Sbjct: 187 FNAASDELTQQSQLRLAMITEFLQYSPDINVVVVDSYTGSYGDELQNLQTSSLRAENIKQ 246
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
Y + N I G+ K I +N + RQ NQR+ I +
Sbjct: 247 YFLDN-GLKNLEIQTNGYGEKSQIASNGNIIERQKNQRVVISL 288
>gi|4704601|gb|AAD28174.1|AF104303_1 fibronectin binding protein [Campylobacter jejuni]
Length = 287
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ A G ++ G T + H F + + F ++ IA +L+
Sbjct: 171 ADTRPAPQAKCPVPSREGALLDENGCEKTISLEGHFGF-DKTTINPTFQEKIKEIAKVLD 229
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ ++ HTD+IG+ N +S+ RA + + +++ I G+ P
Sbjct: 230 ENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANE-LEKYGVEKSRIKTVGYGQDNP 286
>gi|326386939|ref|ZP_08208553.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
gi|326208619|gb|EGD59422.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
Length = 277
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 69/177 (38%), Gaps = 15/177 (8%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITC 74
G + + + D KR + ++ + + Q Q + ++ D I
Sbjct: 103 GTKTLTIPRDATGGAKDGGSKAKRTAALQERLKQKLQASEQLRQLAKQVHLTMTPDGIRL 162
Query: 75 YIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT----DSIGTLKNN 126
+ + + L + + +++ IA + + + ++ HT G NN
Sbjct: 163 DLLDDANFSMFRLGTTILTPQAVELIRAIAQSIAPDQNG-LTVRGHTDSLQWKPGDPANN 221
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S RA+ + L++ GV RF + G A + P+ T++ R N+R+ I +
Sbjct: 222 WSLSAGRAEATRQALLRFGVPEKRFRRIEGVADQEPLITDNPADPR--NRRMSILLM 276
>gi|238756396|ref|ZP_04617706.1| hypothetical protein yruck0001_10350 [Yersinia ruckeri ATCC 29473]
gi|238705369|gb|EEP97776.1| hypothetical protein yruck0001_10350 [Yersinia ruckeri ATCC 29473]
Length = 354
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 72/186 (38%), Gaps = 20/186 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRIGD 70
G ++ + K+ + L+K ++ + ++ ++++ + +
Sbjct: 52 GGGDDPTQQQGEVRKQSQSAETKKEQARLNKLREKLEELIESDPRLKALRPHLLINMMDE 111
Query: 71 MITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-- 124
+ I + + +E +L+ IA ILN P+ I++ HTD +
Sbjct: 112 GLRIQIIDSQNRPMFQMGSAQVEPYMRDILRAIAPILNDIPN-KISLSGHTDDLPYANGE 170
Query: 125 ---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+N +S +RA+ + L+ G++ + + V G A + N+RI I
Sbjct: 171 RGYSNWELSADRANASRRELLSGGLAEGKVLRVVGMASTMRLKEQGADD--PVNRRISIL 228
Query: 182 IFPRGN 187
+ + +
Sbjct: 229 VLNKQS 234
>gi|58422899|gb|AAW73249.1| OmpA [Serratia sp. MF 426]
Length = 228
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + TD++G+ + N +S++RA
Sbjct: 119 SDVLFNFNKATLKPEGQHALDQLYTQLSSLDPKDGSVVVLGFTDAVGSAQYNQRLSEQRA 178
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQ 173
+ YL+ + + IS RG P+ D+ + GR
Sbjct: 179 QSVVDYLVSK-GIPSDKISARGMGKSNPVTGDSCGYRSGRA 218
>gi|91976556|ref|YP_569215.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91683012|gb|ABE39314.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 273
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 61/175 (34%), Gaps = 19/175 (10%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMITCYI 76
K + + VN + A + LQD ++ + I
Sbjct: 90 TSKPAPGEVTRDEGVNTKEEREFALASASLRQALQDLPEISELSKNVMFEETKQGLNLEI 149
Query: 77 PVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLL 128
+ ++ +LQ +A L P ++I HT S + N
Sbjct: 150 MDQDGRAMFADGSKAPFERTRLLLQRLAAPLRATP-LRVSIVGHTSAGSVSQRSDYNGFD 208
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S +RA+V++ L + G+ + +V G A P+ D + N+R+ I +
Sbjct: 209 LSADRANVVRQILEREGLPVSHIFAVTGKADTQPLFPEDPSI--AANRRVTITLM 261
>gi|330465991|ref|YP_004403734.1| OmpA/MotB domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328808962|gb|AEB43134.1| OmpA/MotB domain protein [Verrucosispora maris AB-18-032]
Length = 407
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 11/124 (8%)
Query: 70 DMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+T IP F ++ + L IA +T + + HTDS N
Sbjct: 285 QTVTFNIPSAALFATDSDEIGPAGRNRLAEIAEENKLPKATHLEVVGHTDSRDDADYNQD 344
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-------TNDTKVGRQNNQRIEIQ 181
+S+ RA + L + GV ++ RG + + Q N+R+EI
Sbjct: 345 LSERRAAAVGRILRELGVPVSK---TRGRGEEVRLCLAERLPGGGWDDACLQRNRRVEIV 401
Query: 182 IFPR 185
I +
Sbjct: 402 ISKQ 405
>gi|91776291|ref|YP_546047.1| flagellar motor protein MotB [Methylobacillus flagellatus KT]
gi|91710278|gb|ABE50206.1| OmpA/MotB [Methylobacillus flagellatus KT]
Length = 308
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 71/176 (40%), Gaps = 11/176 (6%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH-- 79
+++V + + +R ++D +E + + + ++ G I +
Sbjct: 111 KTAQEEVAKAELEKLKELKRRIEEAIDASET-LRQFKKQLLLDITTEGLRIQIVDEQNRP 169
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQERA 134
+ S+ L+ +L I +LN P+ I++ HTD+ +N +S +RA
Sbjct: 170 MFASSKAELQPYARQILHEIGQLLNDVPN-KISLSGHTDAAPYPSGERYYSNWELSSDRA 228
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + L+ G+ + + V G + + D + N+RI I I + ++
Sbjct: 229 NASRRELVSGGMKEEKLLRVVGLSSAV-LFDKDNPLN-PINRRISIIIMNKKAEEE 282
>gi|167644831|ref|YP_001682494.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
gi|167347261|gb|ABZ69996.1| OmpA/MotB domain protein [Caulobacter sp. K31]
Length = 409
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V + L + ++ A +T I + HTD+ G+ K N +S+ RA +
Sbjct: 304 VVYFPFDQYVLTPEAQAVVSQAADYAKGGNATKIVVVGHTDTSGSPKYNAKLSERRAKAV 363
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + ++V P V N+R I I
Sbjct: 364 ADGLVGA-GVAATTLAVDWKGESEPAVATGDGVKEPLNRRSTISI 407
>gi|94500304|ref|ZP_01306837.1| chemotaxis protein MotB [Oceanobacter sp. RED65]
gi|94427603|gb|EAT12580.1| chemotaxis protein MotB [Oceanobacter sp. RED65]
Length = 242
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 45/140 (32%), Gaps = 9/140 (6%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-------SEVFLEKKFLPMLQLIATI 102
+ L + +S + I+ +P+ F + ++ + + +
Sbjct: 83 QISDISAALPENEYTLSTMDQWISIEVPMGKLFRWDNRQNRYGSRITQEGAKTMVELVNV 142
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ I I+ + N + I +Q ++V + P
Sbjct: 143 FAE-GDEAINIEVFSADTLDDDNPWQHGAMQGAAIVQ-YLQLEGLQPSRLAVSNYGPYQP 200
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
I TND + GRQ N R+ I
Sbjct: 201 IATNDDEQGRQLNARVNFMI 220
>gi|295095518|emb|CBK84608.1| Flagellar motor protein [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 309
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 67/209 (32%), Gaps = 33/209 (15%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKR-------------FGSSLDKAEDEFQMQ 57
+ T ++G S + + T + + L K +
Sbjct: 67 LATAVTGGPRISNSDSPIPGGGDDYTQQQGEVKKQPNIDELKKRMEQARLKKLRGDLDQL 126
Query: 58 LQDTG----------IVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
++ I + + G I + +E +L+ IA +LN
Sbjct: 127 IEADPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSADVEPYMRDILRAIAPVLNG 186
Query: 106 FPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
P+ I++ HTD +N +S +RA+ + L+ G+ + + V G A
Sbjct: 187 IPN-RISLSGHTDDFPYATGEKGYSNWELSADRANASRRELVAGGLDDGKVLRVVGMAAT 245
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 MRLTDRGPDD--AINRRISLLVLNQQAEQ 272
>gi|239833809|ref|ZP_04682137.1| OmpA/MotB domain-containing protein [Ochrobactrum intermedium LMG
3301]
gi|239821872|gb|EEQ93441.1| OmpA/MotB domain-containing protein [Ochrobactrum intermedium LMG
3301]
Length = 765
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + L+ +A +L K P I+ HTD++G+ ++NL+
Sbjct: 643 RIDLDTIHFATGSAEVSMSQAKTLRKVATAMQKVLAKDPGETFFIEGHTDAVGSDRSNLV 702
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
+S +RA+ + S L + + +G+ ++ T+ Q N+R+ I ++ P
Sbjct: 703 LSDKRAESVASLLTEVYDIPAENLVTQGYGERFLKI--RTQAAEQENRRVTIRRVTP 757
>gi|163732772|ref|ZP_02140217.1| OmpA family domain protein [Roseobacter litoralis Och 149]
gi|161394132|gb|EDQ18456.1| OmpA family domain protein [Roseobacter litoralis Och 149]
Length = 217
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI-QSHTDSIGTLKNNLLISQER 133
I L+ + + IA L + PS + TD++G L N + R
Sbjct: 17 DIGTINFAFDSAELDAEAQAKIVEIAERLKENPSYKPTVLIGFTDAVGGLGYNDRLGLRR 76
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A+ + + L+++GVS +R V + + + + N+R+ + +
Sbjct: 77 ANAVSAALLEQGVSVDRIGGVSSRGERELLVSVAGPE--RQNRRVTVTL 123
>gi|94970509|ref|YP_592557.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
versatilis Ellin345]
gi|94552559|gb|ABF42483.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
versatilis Ellin345]
Length = 264
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 76/209 (36%), Gaps = 32/209 (15%)
Query: 6 GLSMFIMTTISGCGLASREKK----KVFLHKSNDTDIVNKRFGSS-------LDKAEDEF 54
+++FI+ + +E K + T G + + + +++
Sbjct: 35 MMALFIVLWLMNTSKPVKEAISGYFKDPSGTAKKTGSAQSGTGENFTITKDNMPELKEQL 94
Query: 55 QMQL----------QDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATI 102
Q + + I V+ G I +L+++A
Sbjct: 95 QRAIRKMNNFEQLKKQIEITVTSEGLRIELLESAAGTFFDSGSARPNDSGKELLEMLAHE 154
Query: 103 LNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
L P+T I+I+ HTDS +N +S +RA+ + + GV N+ VRGFA
Sbjct: 155 LQNLPNT-ISIEGHTDSKPFVGNGSYSNWELSADRANAARRLMQDSGVRGNQVSQVRGFA 213
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQI--FPR 185
+ + + +N+RI I + P+
Sbjct: 214 DQNLRKKDAPED--PSNRRITILVQYLPK 240
>gi|42768700|gb|AAS45565.1| putative outer membrane protein [Aeromonas hydrophila]
Length = 344
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 54/152 (35%), Gaps = 12/152 (7%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--P 107
+++ ++ + + + L+ + + L + + +F
Sbjct: 194 VAPAPAPVVEEAPAPAPQVVEKNFALNSDVLFAFGKDSLKSEGVAALNGLYQQIVEFQPK 253
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI---- 163
+ +TD IG+ N +S+ RA + ++L+ + + ++V G P+
Sbjct: 254 DGNAVVVGYTDRIGSDDYNQKLSEARARTVANFLVSK-GMAASKVAVEGRGEANPVTGTK 312
Query: 164 -----DTNDTKVGRQNNQRIEIQIFPRGNIKK 190
++R+E+++ ++K
Sbjct: 313 CNGVKAKAQLISCLAPDRRVEVRVSGVQEVQK 344
>gi|78063638|ref|YP_373546.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77971523|gb|ABB12902.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 318
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 20/187 (10%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIG 69
+ + K + S+ + L++ + + + + I ++ G
Sbjct: 105 TPAIDTKAQPVPASSPAALAGIVDTQKLERLKAKLTAAIAQSPSLRAYQDQIRIAITNEG 164
Query: 70 DMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK--- 124
I + + E +L I T L+ + ++I HTDS
Sbjct: 165 LRIEIVDSLKRPMFASGSSQPESYATAILSQIGTALDDVEN-RVSIAGHTDSTPYPDGST 223
Query: 125 --NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S +RA+ + L+ G+ ++ + VRG A P+D N N+RI I +
Sbjct: 224 GYSNWELSSDRANAARRALVAGGLREDKLLQVRGLADVLPLDKNVADE--PTNRRISILV 281
Query: 183 FPRGNIK 189
+
Sbjct: 282 MNNAAEQ 288
>gi|85709639|ref|ZP_01040704.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
gi|85688349|gb|EAQ28353.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
Length = 370
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
E + +L T + + + HTD G++ N+ +++ R +
Sbjct: 262 VFFDFDESVITADAATILDNAVTAYANCGTAAVMLAGHTDRSGSVTYNMGLAERRNASV- 320
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + IS F P V N+R+E+
Sbjct: 321 RAYLTGRGIPDGRISSEAFGESQPRVPTADGVRELQNRRVEVT 363
>gi|170751934|ref|YP_001758194.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170658456|gb|ACB27511.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 348
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
I + L IA +N+ P V I+ TD++G+ +NL +
Sbjct: 215 VDINTITFDTGSFTVTPDQAAKLSGIAGAMNRAIQANPREVFLIEGFTDAVGSALDNLSL 274
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA + + L ++ ++ +G+ +Y + N+R+ + +I P
Sbjct: 275 SDRRAQAVATVLTEQFRVPPENLTTQGYGEQYLKVNTQGPS--RENRRVVVQRITP 328
>gi|332280324|ref|ZP_08392737.1| OmpA/MotB:SmpA/OmlA [Shigella sp. D9]
gi|332102676|gb|EGJ06022.1| OmpA/MotB:SmpA/OmlA [Shigella sp. D9]
Length = 245
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEV---FLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ + + ++ L L +A LN F I + HTD +G+ NL +S++
Sbjct: 123 SDTLFAFDKSGTSDMSQQGLADLDHLAMNLNSFEKINGIIVIGHTDRLGSEDYNLTLSRK 182
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPI----DTNDTKV---GRQNNQRIEIQI 182
RA+ ++ YLI + I+ G P+ ND Q N+R+E+++
Sbjct: 183 RAETVRQYLIAK-GLPAEKITSIGMGKSQPVKKCKYNNDRASLIVCLQPNRRVEVEV 238
>gi|197103803|ref|YP_002129180.1| OmpA family protein [Phenylobacterium zucineum HLK1]
gi|196477223|gb|ACG76751.1| OmpA family protein [Phenylobacterium zucineum HLK1]
Length = 410
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L + ++ A +T + + H D+ G+ N+ +S+ RA +
Sbjct: 306 VYFPFDQYVLTPEAQQVVTEAANYAKGGNATRVVVVGHADTSGSQAYNVRLSERRAKAVA 365
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + +SV P V N+R I I
Sbjct: 366 D-ALVGSGVNQTSLSVDWKGETMPAVATGDGVKEPLNRRSTIDI 408
>gi|15606304|ref|NP_213683.1| flagellar motor protein MotB-like [Aquifex aeolicus VF5]
gi|2983508|gb|AAC07085.1| flagellar motor protein MotB-like [Aquifex aeolicus VF5]
Length = 224
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 9/146 (6%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATIL 103
K + L V + I + + F + L +K L+ IA +L
Sbjct: 73 DYAVKIKKRISKVLPPWAYQVVVAEEYIKLRLFDRIFFENGDYKLTEKGRKTLEEIAPLL 132
Query: 104 NKFPS--TVIAIQSHTD-----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ I ++ H ++N ++ RA + YL RGV ++ ++V
Sbjct: 133 IALSDEISSIRVEGHVGPTVEIKNPIIRNKWELAGRRATEVIRYLENRGVPHDKLVAVS- 191
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ K P+ V + N R+EI I
Sbjct: 192 YGDKRPLYRWRQSVLIERNNRVEINI 217
>gi|254228819|ref|ZP_04922242.1| Flagellar motor protein [Vibrio sp. Ex25]
gi|262396462|ref|YP_003288315.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
gi|151938766|gb|EDN57601.1| Flagellar motor protein [Vibrio sp. Ex25]
gi|262340056|gb|ACY53850.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
Length = 330
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 12/154 (7%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLP 94
++ + E + V+ + + L F
Sbjct: 125 TQEQLAALAKVIERMTAQINAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSN 149
+L +A + + + +I I HTD+I ++N +S RADV ++ L++ G+ +
Sbjct: 185 LLLALAPVFQRVNNPLI-ISGHTDAIPFKKRFGRQSNWALSASRADVARNTLVEGGMPDD 243
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R + V G + + + N + N+RIE+ +
Sbjct: 244 RVMQVTGMSDRALL--NPDEPDSSENRRIELFVL 275
>gi|326795804|ref|YP_004313624.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326546568|gb|ADZ91788.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 300
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 70/200 (35%), Gaps = 27/200 (13%)
Query: 15 ISGCGLASREKK-KVFLHKSNDTDIVNK-------RFGSSLDKAEDEFQMQLQDTGI--- 63
+ G S EKK + L + T+ V + G +++ + +L+ G+
Sbjct: 78 LGGSPAKSNEKKLDLGLPEPGSTEQVTQERKQGEGNDGKEIERMNALLEQELKRQGLMNS 137
Query: 64 -----VVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + + + L +L I +IL + + I+I
Sbjct: 138 EETNMRIEITPQGVRITLLDDPTKPMFERGSARLMPDSENVLLGIGSILARLKN-PISIS 196
Query: 115 SHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
HTDS +N +S RA+ + + + GVS R V G A P N
Sbjct: 197 GHTDSSPYVDEREIDNWDLSSARANSARKIIEEGGVSDKRMAQVIGLADSIP--YNRFDP 254
Query: 171 GRQNNQRIEIQIFPRGNIKK 190
N+RI I + K+
Sbjct: 255 TSAENRRISITLLTDDAYKR 274
>gi|16127077|ref|NP_421641.1| OmpA family protein [Caulobacter crescentus CB15]
gi|221235874|ref|YP_002518311.1| outer membrane protein A [Caulobacter crescentus NA1000]
gi|13424457|gb|AAK24809.1| OmpA family protein [Caulobacter crescentus CB15]
gi|220965047|gb|ACL96403.1| outer membrane protein A [Caulobacter crescentus NA1000]
Length = 191
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 33/102 (32%), Gaps = 1/102 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L++ +L A +T I + H D+ G N+ +S+ RA
Sbjct: 87 VYFPFDSAVLDESGQIVLVAAANYAKSGNATRIVVVGHADTAGPDAYNIGLSERRAKATA 146
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ S I+V P V N+R+ I
Sbjct: 147 D-TLVNLGISASTIAVDWKGESAPAVATGDGVSEPLNRRVTI 187
>gi|301598138|ref|ZP_07243146.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB059]
Length = 45
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 17/45 (37%)
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +S G P+ N + GR+ N+RIE +
Sbjct: 1 KNYLISKNIPADHLSTEGLGSSKPVADNTSAEGRKKNRRIEFTVL 45
>gi|261341475|ref|ZP_05969333.1| chemotaxis protein LafU [Enterobacter cancerogenus ATCC 35316]
gi|288316271|gb|EFC55209.1| chemotaxis protein LafU [Enterobacter cancerogenus ATCC 35316]
Length = 306
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 59/174 (33%), Gaps = 15/174 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL----QDTGIVVSRIGDMITCYIP 77
+ KS D V R + ++ + + + + + I
Sbjct: 105 KETPTPAAMAKSASLDDVKSRSQNEIEDLARIIMKITSAYDAQSNLKIEIVPQGLRILIT 164
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI---- 129
+ S L F +L A LNK I I HTD+ +L
Sbjct: 165 DDQKREMFQRSSAILTPFFKRLLTEFAPALNKI-DNKIIITGHTDATRFRDQDLYNNYNL 223
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S ERA + L G+ ++ + V G A + +D + +N+RIEI +
Sbjct: 224 SGERAMQARKVLTHAGLDQDKVLQVSGMADQMLLDPANPLS--SSNRRIEIMVL 275
>gi|291615184|ref|YP_003525341.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
gi|291585296|gb|ADE12954.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
Length = 185
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 10/187 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-- 59
++++ L +++ + C A L K D+ K + +KA + Q+
Sbjct: 1 MRKILLVASLLSFTATCAHAGLMDD---LKKPGGGDLGAKITDQAREKARAKGNQQIASQ 57
Query: 60 -DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSH 116
+ ++ + + V KK ++ + L + H
Sbjct: 58 VNKKLLAEGRKNQCSFKSGTDVLEAGCGAKSKKLANVIIDVKKSLQSQGQKGFKFIVSGH 117
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA-YKYPIDTNDTKVGRQNN 175
TDS G N +S RA V+ LI + I G K + ++T + N
Sbjct: 118 TDSSGDATKNKELSARRARVMVKELIAQ-GVDAGDIEAVGMGSEKMLVKPDNTPAKKAKN 176
Query: 176 QRIEIQI 182
+R E+Q+
Sbjct: 177 RRYEVQV 183
>gi|146276382|ref|YP_001166541.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145554623|gb|ABP69236.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 730
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 6/114 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPML----QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ ++ L Q IA ++ + P V I+ HTD++G +NL +
Sbjct: 610 IDVDQITFATGSAAIDPGQAERLAVLGQTIADMVAERPGEVFLIEGHTDAVGDEASNLAL 669
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S RA+ + L + + V+G+ D R N+R+ +++
Sbjct: 670 SDRRAESVALALSEYFDVPPENMVVQGYGEGDLRIDTDGPEQR--NRRVAVRLI 721
>gi|148974248|ref|ZP_01811781.1| chemotaxis LafU protein [Vibrionales bacterium SWAT-3]
gi|145965945|gb|EDK31193.1| chemotaxis LafU protein [Vibrionales bacterium SWAT-3]
Length = 324
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 8/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
E L + V+ G + + F + F L L L +
Sbjct: 124 TQELSGIDALGSVSVFVTPQGAKLVIADSDKGPMFFRGGAKVTP-FYQDLLLNLAGLLEN 182
Query: 107 PSTVIAIQSHT---DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ I HT G+ N +S RA+ + YL + G+ V G + P+
Sbjct: 183 IENKMIITGHTDASRYKGSRMTNWELSSNRANSARYYLNKGGLQERHIFQVTGMSDTAPV 242
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
D +TK G N+RIE+ I
Sbjct: 243 DYENTKSG--INRRIELYIL 260
>gi|226944522|ref|YP_002799595.1| flagellar motor protein [Azotobacter vinelandii DJ]
gi|226719449|gb|ACO78620.1| Flagellar motor protein [Azotobacter vinelandii DJ]
Length = 306
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 16/140 (11%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ I ++ G I + + + +L+ +A +LN+ P+ I
Sbjct: 132 LKELKDQILIDLTPEGLRIQLVDTEQRPMFEIGSARVAPYMRTLLRTLAPMLNELPN-RI 190
Query: 112 AIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP---I 163
I HTDS+ +N +S +RA+ + LI G++ + + G + + P +
Sbjct: 191 QISGHTDSLPYAGGEAGYSNWELSADRANASRRELIAGGLALEKLLRTSGMSDRIPFEGV 250
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
ND N+RI + +
Sbjct: 251 APND-----AANRRIAVIVL 265
>gi|319953635|ref|YP_004164902.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319422295|gb|ADV49404.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 642
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V + + + L +A ++ FP + ++SHT+S G+
Sbjct: 513 VEEKESKTVIKLQKFYFSKGKSTITPAIAAELDKVAAVVVNFPEIQLKVESHTNSRGSGA 572
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+NL +SQ+RA ++ YL+ +GVSS + G+
Sbjct: 573 SNLSLSQDRASAVRKYLLSKGVSSENVVEYIGYGE 607
>gi|307318588|ref|ZP_07598022.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
gi|306895928|gb|EFN26680.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
Length = 489
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLL 128
+ + ++ +A +NK P I+ HTD++G ++NL+
Sbjct: 367 RIDLDTITFATGSAEVSMSQAKTMRNVAEAMNKVLEKDPGETFFIEGHTDAVGADQSNLV 426
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
+S ERA+ + L + + +G+ ++ D Q N+R+ I ++ P
Sbjct: 427 LSDERAESVAVLLTEVYGIPAENLVTQGYGERFLKIRTDGPE--QENRRVTIRRVTP 481
>gi|257092704|ref|YP_003166345.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045228|gb|ACV34416.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 221
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 50/166 (30%), Gaps = 18/166 (10%)
Query: 34 NDTDIVNKRFGSSLDK-------AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
G DK E GD IT + ++
Sbjct: 55 TPAAAAKDPAGCKCDKDLLPKEVCEPMVAKAAPAAAPAAKPSGDKITVAA-DALFDFNKA 113
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
L + L + VI HTD IG+ N +S+ RA +K YL+ +
Sbjct: 114 TLRPEGKAKLDEVVAKAGAIKLEVIIAVGHTDRIGSDAYNQKLSERRAAAVKQYLVSK-G 172
Query: 147 SSNRFISVRGFAYKYPI-----DTNDTK----VGRQNNQRIEIQIF 183
+ G K P+ T Q ++R++I++
Sbjct: 173 IDANRVYTEGKGKKNPVTKPDQCLGKTSPKVIACLQPDRRVDIELI 218
>gi|149189863|ref|ZP_01868143.1| putative sodium-type flagellar protein MotY precursor [Vibrio
shilonii AK1]
gi|148836349|gb|EDL53306.1| putative sodium-type flagellar protein MotY precursor [Vibrio
shilonii AK1]
Length = 334
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + + LQ +A+ + + + HTD++G+ +NL +S+ RAD + S
Sbjct: 214 FDFGQRVVTSEQRQTLQSLASYIKADGHISKVLVDGHTDNVGSSLSNLQVSRVRADDVAS 273
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
++ + + I VR +YP+ +N+T+ G+ N
Sbjct: 274 -VLTELGTPAKLIEVRAHGARYPVSSNETEFGQAKN 308
>gi|323529505|ref|YP_004231657.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323386507|gb|ADX58597.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 328
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 10/178 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
K SL + + I ++ G I
Sbjct: 116 AATPVNVVPTVAPADAARLQQLKEKLISLIEQSPALKAFKDQIRISITNEGLRIEIVDSQ 175
Query: 79 H--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-----KNNLLISQ 131
+ + L+ + +L I LN I+I HTD++ +N +S
Sbjct: 176 NRPMFASGSPRLQTYAVAILTQIGAALNDV-DNRISIAGHTDAVPYTGGPVGYSNWELSS 234
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
ERA+ + L+ G+ + + VRG A P+++N N+RI I + + +
Sbjct: 235 ERANAARRALVSGGMHGEKLLQVRGLADVLPLNSNVVDE--PTNRRISILVMNKAAEQ 290
>gi|327402931|ref|YP_004343769.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327318439|gb|AEA42931.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 254
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
+ + + ++ + L + + L + I + H ++ +S
Sbjct: 144 GVPIKLEIQFAYGLDAML-PSSYNDIHFLIETLQADKTLFITLAGHVC---CGTDSKNLS 199
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
RA+ IK LI G S+ I+ GF K P+ +DT++ RQ N+R+E
Sbjct: 200 GMRAERIKQILIMEGSISSSRINAIGFGNKKPLFEDDTEIHRQANRRVE 248
>gi|159045040|ref|YP_001533834.1| hypothetical protein Dshi_2499 [Dinoroseobacter shibae DFL 12]
gi|157912800|gb|ABV94233.1| hypothetical protein Dshi_2499 [Dinoroseobacter shibae DFL 12]
Length = 240
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 3/109 (2%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ-SHTDSIGTLKNNLLISQER 133
+ + L+ + ++ IA L PS I +TD++G+ NL + Q R
Sbjct: 37 DLGTVLFDFDSASLDAEAATQVRAIAEALEATPSYKPTIVVGYTDAVGSTGYNLALGQRR 96
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A + L +GV +R S+ + T R N+R+ + +
Sbjct: 97 AQTVADALTAQGVPVSRIGSIASRGESDLVVAVATAERR--NRRVNVAL 143
>gi|116329456|ref|YP_799176.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116329940|ref|YP_799658.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116122200|gb|ABJ80243.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116123629|gb|ABJ74900.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 195
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 72/194 (37%), Gaps = 20/194 (10%)
Query: 1 MIKELG-LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K++ L + S +S EKK+ + S+D E
Sbjct: 1 MVKKILNLILLGAIAFSFTLCSSAEKKEESAAPEPSAQEQSAAANRSVDVNSPEAIADSL 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK-----FLPMLQLIATILNKFPS-TVIAI 113
+ + R D IT + + + +I L K P + I
Sbjct: 61 NEKLKDFRYPDGIT----RPGFSYKKADVNPGDFSGWSKVNVPVIKEGLGKLPDSYALEI 116
Query: 114 QSHTDSIGTLKN------NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
HTD++G + N+ S+ RA+ +K LI++G+ +NR I +G P+ D
Sbjct: 117 TGHTDAVGPEQAEGAKKGNIFYSELRANAVKQALIKQGIPANRII-AKGAGSSEPVSGLD 175
Query: 168 TKVGRQNNQRIEIQ 181
K N+R+ +
Sbjct: 176 AKD--AKNRRVTFR 187
>gi|158422249|ref|YP_001523541.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
gi|158329138|dbj|BAF86623.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
Length = 472
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 62/175 (35%), Gaps = 17/175 (9%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT-------GIVVSRIGDMITC 74
+ K + +N K ++ DK + E +Q + V + I
Sbjct: 297 DQAKGEQAKGDANAGAATFKIDQANADKLKTEAVAAVQSNLGSVAAPKVDVRVTKEGIVL 356
Query: 75 YIPVHV----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NL 127
+ + V + + + + I L K P + I+ +TD + N
Sbjct: 357 SLTDDINYSMFPVGSAVPDGRLVRAMAKIGEALGKRPG-EVVIRGYTDGRPYRSDTYDNW 415
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S RA + L++ G+ R + G+A + N + N+RIEI +
Sbjct: 416 RLSTARAHMTYYMLVRGGLQEPRVAMIEGYADRNLK--NKAEPYAAENRRIEILL 468
>gi|186473029|ref|YP_001860371.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184195361|gb|ACC73325.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 327
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 59/183 (32%), Gaps = 16/183 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAED------EFQMQLQDTGIVVSRIGDMIT 73
+E K L + R K + I ++ G I
Sbjct: 112 TMQQEPAKPTLTQITTVPNDTARLEQLKSKLSALIEDTPALKAFKDQIRISITNEGLRIE 171
Query: 74 C--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-----TDSIGTLKNN 126
+ + L+ + +L I LN I+I H + +N
Sbjct: 172 IVDTLKRPMFATGSSKLQSYAVEILTRIGAALNDV-DNRISIAGHTDAVTYANGPAGYSN 230
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S ERA+ + L+ G+ ++ + VRG A P+ N N+RI + + +
Sbjct: 231 WELSSERANAARRALVAGGMREDKLLQVRGLADVLPL--NANVADEPTNRRISVLVLNKA 288
Query: 187 NIK 189
+
Sbjct: 289 AEQ 291
>gi|254227706|ref|ZP_04921137.1| OmpA family protein [Vibrio sp. Ex25]
gi|262395752|ref|YP_003287605.1| hypothetical protein VEA_000452 [Vibrio sp. Ex25]
gi|151939748|gb|EDN58575.1| OmpA family protein [Vibrio sp. Ex25]
gi|262339346|gb|ACY53140.1| hypothetical protein VEA_000452 [Vibrio sp. Ex25]
Length = 1591
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 57/156 (36%), Gaps = 13/156 (8%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--SFVSEV--FLEKKFLPML 96
+ + +LD A++ + + + +I L +
Sbjct: 611 QEWAQALDDAKNVINGSDGEEIAHIVEDSQGLAIHINFKFNEWQHGNEHGKLRTDIKQVC 670
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ ++ ++ PS ++I+ H IG+ N L++ +RA + + +I S +
Sbjct: 671 KYLSQLMLDNPSYKVSIEGHAGRIGSSDANALVAAKRAKTVTNAIISIDPSLEERVYTAS 730
Query: 157 FAYKYPIDTNDTKVGR---------QNNQRIEIQIF 183
+ P+ + TK ++R+E+++
Sbjct: 731 YGNTQPLTADSTKSDMSQTGDSAPAALDRRVEVRLI 766
>gi|323529150|ref|YP_004231302.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323386152|gb|ADX58242.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 349
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 54/152 (35%), Gaps = 11/152 (7%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPMLQL 98
+L K+ + S +T F + + L
Sbjct: 196 SDIQDNLRKSAESALQCKPAAAAPQSTTPQAVTLRADSLFRFDGGNDAAMLPAGRRALDA 255
Query: 99 IATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A L + I I +TD +G +N +S +RA + YL RGV+S I+VRG
Sbjct: 256 VARRLTTVTALREIRITGYTDRLGENAHNRSLSLQRAQTVARYLRARGVTSP--IAVRGL 313
Query: 158 AYKYPIDTNDTK------VGRQNNQRIEIQIF 183
A P+ N+R+EI++
Sbjct: 314 ASANPVAECRQSRRDELVQCLAPNRRVEIELV 345
>gi|157959885|ref|YP_001499919.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157844885|gb|ABV85384.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 336
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 65/164 (39%), Gaps = 13/164 (7%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SF 82
L +T + +D+ + + + + + + ++
Sbjct: 131 NAMLPGKFETQAQLEVLAREIDRV---IEDVSMSANVKLQVVPQGVRILMHDNINKFMFT 187
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS---IGTLKNNLLISQERADVIKS 139
++ F +L + +L+K + ++I HTDS IG N +S +RA + +
Sbjct: 188 RGSSEMKPYFEDLLMALGPVLSKVEN-KMSISGHTDSTPFIGKTFTNWELSSKRALLARR 246
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L GV +N+ + V G A + P ++D N+RIE+ I
Sbjct: 247 VLGYAGVKNNQVLQVTGMADQAPYISHDPAA--AANRRIEMIIM 288
>gi|88858356|ref|ZP_01132998.1| hypothetical protein PTD2_13239 [Pseudoalteromonas tunicata D2]
gi|88819973|gb|EAR29786.1| hypothetical protein PTD2_13239 [Pseudoalteromonas tunicata D2]
Length = 247
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/178 (14%), Positives = 64/178 (35%), Gaps = 8/178 (4%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
+ ++G GL + + K+ TD+V + S + L++ +
Sbjct: 56 AFIGALTG-GLIGQTASDSKIIKAQHTDLVALQQQSLQQQDLMAQNEALENRLSEIEFEK 114
Query: 70 DMIT------CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + +E F L +A +L + P + +Q D G
Sbjct: 115 NKLQQQRLDNLMAMTVQFRSGSSAIEAHFASQLDEVAAVLAQNPDLSLDLQGFADRRGDE 174
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ NL++S++R + + + + ++ F ++ + G ++R+ ++
Sbjct: 175 QANLILSKQRVTNV-KAYLVKQGVNAVRLNTDAFGEQHALAAQQDFEGDFFDRRVTLK 231
>gi|319783370|ref|YP_004142846.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169258|gb|ADV12796.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 185
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 59/164 (35%), Gaps = 14/164 (8%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQL-QDTGIVVSRIGDMI-------TCYIPVHVS 81
+ + K E +++L + + + + I
Sbjct: 17 MPSLAAAQATTPSAATIERKLEAAPRVKLRPNERVTIREFKRRPDLRRMARSIDIQSINF 76
Query: 82 FVSEVFLEKKFLPMLQLIAT----ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ IA IL + P + I+ HTD++G+ ++N +S++RA +
Sbjct: 77 AFGSAAIANSQYDKIETIADALRRILRRDPGARVLIEGHTDAVGSFQSNQALSEQRAASL 136
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
K L++ + G+ ++ + + N+R+ ++
Sbjct: 137 KRTLVREFRVPGHALETVGYGEEFLLVQTQNE--NWQNRRVTLR 178
>gi|148251854|ref|YP_001236439.1| OmpA family protein [Bradyrhizobium sp. BTAi1]
gi|146404027|gb|ABQ32533.1| putative exported protein of unknown function with OmpA family
domain [Bradyrhizobium sp. BTAi1]
Length = 727
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + LQ+IA LN+ P V I+ HTD++G +NL +
Sbjct: 594 IDLNTITFETGSWEIGPDQVAKLQVIADGLNQAIQRNPREVFLIEGHTDAVGNETDNLSL 653
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA+ + + L Q+ ++ +G+ +Y + + N+R+ + +I P
Sbjct: 654 SDRRAESVATLLTQQFGVPAENLTSQGYGEQYLKEQTQGPS--RINRRVTVRRITP 707
>gi|331663388|ref|ZP_08364298.1| chemotaxis protein MotB [Escherichia coli TA143]
gi|331059187|gb|EGI31164.1| chemotaxis protein MotB [Escherichia coli TA143]
Length = 366
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 185 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 244
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 245 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 303
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 304 RLSDRGPDD--AVNRRISLLVLNKQAEQ 329
>gi|262068311|ref|ZP_06027923.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693]
gi|291377972|gb|EFE85490.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693]
Length = 122
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ ML + + + + + ++ HTDSIG+ + N+ +S+
Sbjct: 29 IVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQN-NYEVTLEGHTDSIGSNQYNIGLSR 87
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
RA+ +K+ LI+ G++ R + + +YP+ TN
Sbjct: 88 RRAEAVKAKLIEFGLAEERIVGIEAKGEEYPVATN 122
>gi|91223190|ref|ZP_01258456.1| chemotaxis LafU protein [Vibrio alginolyticus 12G01]
gi|269967120|ref|ZP_06181187.1| chemotaxis LafU protein [Vibrio alginolyticus 40B]
gi|91192003|gb|EAS78266.1| chemotaxis LafU protein [Vibrio alginolyticus 12G01]
gi|269828257|gb|EEZ82524.1| chemotaxis LafU protein [Vibrio alginolyticus 40B]
Length = 331
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 60/154 (38%), Gaps = 12/154 (7%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLP 94
++ + E + V+ + + L F
Sbjct: 126 TQEQLAALAKVIEQMTAQINAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFED 185
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSN 149
+L +A + ++ + +I I HTD+I ++N +S RADV ++ L++ G+ +
Sbjct: 186 LLLALAPVFHRVNNPLI-ISGHTDAIPFKKRFGRQSNWALSASRADVARNTLVEGGMPDD 244
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R + V G + + + N + N+RIE+ +
Sbjct: 245 RVMQVTGMSDRALL--NPDEPDSSENRRIELFVL 276
>gi|213647163|ref|ZP_03377216.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
Length = 275
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 67/184 (36%), Gaps = 20/184 (10%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMI 72
+++ + N ++ + S L+K + ++ I + + G I
Sbjct: 58 TQQQGEVEKQPNIDELKKRMEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRI 117
Query: 73 TC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
+ +E +L+ IA +LN P+ I++ HTD +
Sbjct: 118 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPN-RISLAGHTDDFPYANGEKGYS 176
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + + V G A + N+RI + + +
Sbjct: 177 NWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNK 234
Query: 186 GNIK 189
+
Sbjct: 235 QAEQ 238
>gi|146305234|ref|YP_001185699.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145573435|gb|ABP82967.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 313
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 59 QDTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ I V + + I + L+ F +LQ +A IL K + +I I
Sbjct: 150 AEANIEVQVVPQGLRILIKDDAQRFMFSRGSARLDPHFEKLLQRLAGILAKVDNHLI-IS 208
Query: 115 SHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
HTDS NN +S +RA ++ L++ G+ ++ + V A P+ +D +
Sbjct: 209 GHTDSTPYRGVVGGYNNWNLSGDRALRARNVLVEAGLPTSAVLQVTAQADGMPLLPSDPQ 268
Query: 170 VGRQNNQRIEIQIF 183
G N+RIE+ +
Sbjct: 269 NG--ANRRIELLLL 280
>gi|117618219|ref|YP_855821.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559626|gb|ABK36574.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 333
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 42/118 (35%), Gaps = 12/118 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + + L + + + +TD IG+ NL +S+ RA
Sbjct: 210 SDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRIGSDAYNLKLSEARA 269
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI---------DTNDTKVGRQNNQRIEIQIF 183
+ +L+ + +++ G P+ ++R+E+++
Sbjct: 270 RTVADFLVGK-GLPAGKVAIEGRGEANPVTGTQCNGIKAKAQLISCLAPDRRVEVRVT 326
>gi|4704599|gb|AAD28173.1|AF104302_1 fibronectin binding protein [Campylobacter jejuni]
Length = 287
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G ++ G T + H F + + F ++ IA +L++ ++ HTD+I
Sbjct: 187 EGALLDENGCEKTISLEGHFGF-DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI 245
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
G+ N +S+ RA + + +++ I G+ P
Sbjct: 246 GSRAYNQKLSERRAKSVANE-LEKYGVEKSRIKTVGYGQDNP 286
>gi|330954871|gb|EGH55131.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 831
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 25/185 (13%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI--------- 72
+ +D ++ D+ + ++ + ++S + I
Sbjct: 644 DTNVSAQAAGEVDDYQFAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLR 703
Query: 73 ---TCYIPVHVSF-VSEVFLEK---KFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLK 124
T + F + L IA L P+ I I H D IG +
Sbjct: 704 AIETITLESDTLFAFGRADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQIGDAQ 763
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQR 177
+NL +S++RA IK+YL+ + + + G P+ D ++ R N+R
Sbjct: 764 SNLQVSRQRAQTIKTYLVGK-GLPSELVDAVGEGSNKPLVHCDMQMPRAELIHCLEPNRR 822
Query: 178 IEIQI 182
+EI++
Sbjct: 823 VEIEV 827
>gi|302189602|ref|ZP_07266275.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
Length = 831
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 25/185 (13%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI--------- 72
+ +D ++ D+ + ++ + ++S + I
Sbjct: 644 DTNVSAQAAGEVDDYQFAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLR 703
Query: 73 ---TCYIPVHVSF-VSEVFLEK---KFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLK 124
T + F + L IA L P+ I I H D IG +
Sbjct: 704 AIETITLESDTLFAFGRADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQIGDAQ 763
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQR 177
+NL +S++RA IK+YL+ + + + G P+ D ++ R N+R
Sbjct: 764 SNLQVSRQRAQTIKTYLVGK-GLPSELVDAVGEGSNKPLVHCDMQMPRAELIHCLEPNRR 822
Query: 178 IEIQI 182
+EI++
Sbjct: 823 VEIEV 827
>gi|289672144|ref|ZP_06493034.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
Length = 831
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 25/185 (13%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI--------- 72
+ +D ++ D+ + ++ + ++S + I
Sbjct: 644 DTNVSAQAAGEVDDYQFAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLR 703
Query: 73 ---TCYIPVHVSF-VSEVFLEK---KFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLK 124
T + F + L IA L P+ I I H D IG +
Sbjct: 704 AIETITLESDTLFAFGRADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQIGDAQ 763
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQR 177
+NL +S++RA IK+YL+ + + + G P+ D ++ R N+R
Sbjct: 764 SNLQVSRQRAQTIKTYLVGK-GLPSELVDAVGEGSNKPLVHCDMQMPRAELIHCLEPNRR 822
Query: 178 IEIQI 182
+EI++
Sbjct: 823 VEIEV 827
>gi|300024596|ref|YP_003757207.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299526417|gb|ADJ24886.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 424
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 70/187 (37%), Gaps = 19/187 (10%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT-----GIVVSRIGD 70
+ L ++++ + +D + + K +D+ L I V +
Sbjct: 245 AATALNAKDQ-NHAANAPKPSDAADVADEAKAKKLQDDISSALAKGSRAAPEIEVKATSE 303
Query: 71 MITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-- 124
+ + + V + + + +L P I ++ HTDS
Sbjct: 304 GLLVSLLDGADFGMFEVGSAKPRPALVLAMSKVGDVLKSLPG-SIVVRGHTDSRAYKNGN 362
Query: 125 -NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+N +S RA + L++ G++ RF ++ G A + P ++ + N+RI+I I
Sbjct: 363 YDNWRLSAARAQMAYYMLVRGGIAETRFAAIEGRADRDPKIPSNREA--PENRRIDILI- 419
Query: 184 PRGNIKK 190
+KK
Sbjct: 420 --KEVKK 424
>gi|145298280|ref|YP_001141121.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142851052|gb|ABO89373.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 333
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 42/118 (35%), Gaps = 12/118 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + + L + + + +TD IG+ NL +S+ RA
Sbjct: 210 SDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRIGSDAYNLKLSEARA 269
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQIF 183
+ +L+ + +++ G P+ ++R+E+++
Sbjct: 270 RTVADFLVGK-GLPAGKVAIEGRGEASPVTGTQCDGIKAKAQLIACLAPDRRVEVRVT 326
>gi|294142661|ref|YP_003558639.1| OmpA family protein [Shewanella violacea DSS12]
gi|293329130|dbj|BAJ03861.1| OmpA family protein [Shewanella violacea DSS12]
Length = 334
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 36/111 (32%), Gaps = 3/111 (2%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L L + + + I + DS G N +S+ RA ++
Sbjct: 223 VLFGFDSSELSTTAQAKLDEVVRVSKLNDNDTILLIGQADSRGDAGYNQKLSEARAQHVE 282
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
YL+ + + + + + + R +R+ I + ++
Sbjct: 283 DYLVS-HGVEVQQLGHQASGEQDSHAS--SSQDRAQERRVIITLTSETQVE 330
>gi|213022384|ref|ZP_03336831.1| hypothetical protein Salmonelentericaenterica_06936 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 62
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + G P+ N +K GR N+R+EI +
Sbjct: 24 GVPAGRVHIVGKGDTVPVADNGSKAGRAKNRRVEILVV 61
>gi|254491000|ref|ZP_05104181.1| OmpA family protein [Methylophaga thiooxidans DMS010]
gi|224463513|gb|EEF79781.1| OmpA family protein [Methylophaga thiooxydans DMS010]
Length = 171
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 14/177 (7%)
Query: 9 MFIMTTISGCG----LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
M + ++GC +K + L +S + +V S K M+L +T +
Sbjct: 1 MLVAFVVTGCSGIHNTIGPDKMQSDLRESVEAPVVVAEGESPFCKVPP---MELPETPKL 57
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V+ + + F+ + + Q I + + I HTD+ +
Sbjct: 58 VT-----LPEPFSAKLFFLLDKTEFTAESRVESQEIYQKILDRSFGEVVITGHTDTSASS 112
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
N +S RA ++ LI + + + + N+R+EI
Sbjct: 113 AYNEALSLRRAQKVRQQLID-FGVPADSVRISAEGEYRLLVSTPDDTVEVRNRRVEI 168
>gi|156976178|ref|YP_001447084.1| flagellar motor protein [Vibrio harveyi ATCC BAA-1116]
gi|156527772|gb|ABU72857.1| hypothetical protein VIBHAR_04949 [Vibrio harveyi ATCC BAA-1116]
Length = 330
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 22/172 (12%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDE----------FQMQLQDTGIVVSRIGDMITCYIPVHV 80
D ++ + D E + V+ + +
Sbjct: 107 QGDGDGPEIDSLIPGNFDTQEQLALLAKVIDEVVGQISAQGNVNVTITPQGLRIVLQDDY 166
Query: 81 ----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQ 131
L F +L +A + + + + I HTDS ++N +S
Sbjct: 167 KQHMFSRGGAELTPFFEDLLLALAPVFERISN-PLFISGHTDSTPFKKRFGRQSNWALSA 225
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RADV ++ L++ G+ +R + V G + + ++ + N+RIE+ I
Sbjct: 226 SRADVARNTLVEGGMPDDRVMQVTGMSDRALLNPEEPDS--SENRRIELFIL 275
>gi|251733443|emb|CAR82471.1| pal [Mesorhizobium mediterraneum]
Length = 87
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A LN++ I I+ H D GT + NL + RA + +L+
Sbjct: 2 DSSSIRADAQTTLSRQAQWLNQYGQYAIVIEGHADERGTREYNLALGARRAAATRDFLVA 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RGVS R ++ + + P+ D
Sbjct: 62 RGVSGQRLKTIS-YGKERPVAVCDD 85
>gi|222084880|ref|YP_002543409.1| chemotaxis motility protein [Agrobacterium radiobacter K84]
gi|221722328|gb|ACM25484.1| chemotaxis motility protein [Agrobacterium radiobacter K84]
Length = 452
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 21/181 (11%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAE--DEFQMQLQDT----------GIVVSRI 68
+ + +K + + +K D+ + E Q +Q G+ V+
Sbjct: 243 SDQRQKGQGADEKISSATQSKDIAPPKDQQQSAKELQQAIQAEISGVAGQLAEGVQVASA 302
Query: 69 GDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA---IQSHTDSIG 121
+ I + + ++ + + I IL ++ +G
Sbjct: 303 EGGLLVTISDQSNDPMFNIGSAVPRREMVLAMGKIGKILANRKGVILIRGHTDGRPYMVG 362
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+N +S +RA L G+ R V GFA + ND N+RIEI
Sbjct: 363 GHNDNWRLSLDRAQSAYYMLTSTGLDEKRIEQVSGFADRRLKLPNDPFND--ANRRIEIL 420
Query: 182 I 182
I
Sbjct: 421 I 421
>gi|149377734|ref|ZP_01895468.1| Flagellar motor protein [Marinobacter algicola DG893]
gi|149357960|gb|EDM46448.1| Flagellar motor protein [Marinobacter algicola DG893]
Length = 319
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 64/187 (34%), Gaps = 19/187 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRI 68
E+ + + ++ +++ + + +++ I ++
Sbjct: 86 SSEDIERSDIQIEDQVVEELAQTLEQQQMEELFQDLKERIEQNETLQEFKDQLLIDITSE 145
Query: 69 GDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL--- 123
G I + L+ +L +A L + ++I HTDS
Sbjct: 146 GLRIQIVDRSQRPMFDSGRAELKYYSQDILFELAKTLGTVNN-KLSITGHTDSTPFSGRP 204
Query: 124 -KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S +RA+ + L+ GV N+ V G + D +D + N+RI I +
Sbjct: 205 GYTNWELSADRANTARRALVAGGVRQNQIGRVVGLSDSVLFDQDDPQA--PVNRRISIIV 262
Query: 183 FPRGNIK 189
+ +
Sbjct: 263 MNKKTAQ 269
>gi|153836044|ref|ZP_01988711.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ3810]
gi|149750798|gb|EDM61543.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ3810]
Length = 330
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 68/172 (39%), Gaps = 11/172 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + DT +++ + Q + + V+ G I
Sbjct: 108 GDGDGPEINSLVPGTFDTQEQLAALAKVIEEMTAQINAQ-GNVNVTVTPQGLRIVLQDDY 166
Query: 78 -VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQ 131
H+ L F +L +A + + + +I I HTD+I ++N +S
Sbjct: 167 KQHMFSRGGAELTPFFEDLLLALAPLFEQVTNPLI-ISGHTDAIPFKKRFGRQSNWALSA 225
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RADV + L++ G+ +R + V G + + + N + N+RIE+ I
Sbjct: 226 SRADVARKTLVEGGMPDDRVMQVTGMSDRALL--NPDEPDSSENRRIELFIL 275
>gi|157145319|ref|YP_001452639.1| flagellar motor protein MotB [Citrobacter koseri ATCC BAA-895]
gi|157082524|gb|ABV12202.1| hypothetical protein CKO_01059 [Citrobacter koseri ATCC BAA-895]
Length = 308
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 64/180 (35%), Gaps = 20/180 (11%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMI 72
+++ + N ++ + S L K + ++ I + + G I
Sbjct: 91 TQQQGEVNKQPNIDELKKRMEQSRLSKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRI 150
Query: 73 TC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
+ +E +L+ IA +LN P+ I++ HTD +
Sbjct: 151 QIIDSQNRPMFKTGSAEVEPYMRDILRGIAPVLNGIPN-RISLSGHTDDFPYASGERGYS 209
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + V G A + N+RI + + +
Sbjct: 210 NWELSADRANASRRELVVGGLDDGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNK 267
>gi|254419004|ref|ZP_05032728.1| OmpA family protein [Brevundimonas sp. BAL3]
gi|196185181|gb|EDX80157.1| OmpA family protein [Brevundimonas sp. BAL3]
Length = 297
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 70/187 (37%), Gaps = 22/187 (11%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDM 71
A ++ + KR + A + + +Q ++V + +
Sbjct: 108 TAGSSTNLASASEAALQAEIQKREAAEFASAAESLRQAMQSMPELAELSKQLIVDQTPEG 167
Query: 72 ITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN-- 125
+ + + + + +L+ +A ++N+ P+ I+I HT +
Sbjct: 168 LRIQLVDQEGRSMFDNNSARPNARAQVLLRAVAKVINQLPN-RISITGHTSATPGSNRAS 226
Query: 126 ---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-TKVGRQNNQRIEIQ 181
+ +S ERA+ + L GV ++R SV G A P+ +D T G N+RI I
Sbjct: 227 GPADWTLSSERANGSRLVLQSAGVDADRVYSVAGKAGSDPLYPDDPTLAG---NRRIAIV 283
Query: 182 IFPRGNI 188
+ +
Sbjct: 284 LLREAPV 290
>gi|315223455|ref|ZP_07865312.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287]
gi|314946628|gb|EFS98619.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287]
Length = 397
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 3/163 (1%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVH 79
S K + + V S L+ ++ + + D+I
Sbjct: 236 KSEVANKQNKMNDANGNNVPDEIESYLNDNYKAKDKVGENGEVKDDDVAADLIRKGYINA 295
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + + +A + P+ I I + D +G + N +SQ+RAD +K
Sbjct: 296 YFDFNSSKPQISSSWAVDFVAKYMKSNPNAHININGYADELGGTQYNQTLSQKRADAVKD 355
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L++ G+ +R I+ G +D N ++ RQ ++ ++
Sbjct: 356 LLVKAGIDGSR-ITAEGKGVDASVDKNSSRA-RQLARKTTFEL 396
>gi|300904777|ref|ZP_07122605.1| chemotaxis protein MotB [Escherichia coli MS 84-1]
gi|301305233|ref|ZP_07211330.1| chemotaxis protein MotB [Escherichia coli MS 124-1]
gi|300403291|gb|EFJ86829.1| chemotaxis protein MotB [Escherichia coli MS 84-1]
gi|300839439|gb|EFK67199.1| chemotaxis protein MotB [Escherichia coli MS 124-1]
gi|315257277|gb|EFU37245.1| chemotaxis protein MotB [Escherichia coli MS 85-1]
Length = 308
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 CLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|260574379|ref|ZP_05842383.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259023275|gb|EEW26567.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 280
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 66/182 (36%), Gaps = 14/182 (7%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-----EDEFQMQLQDTGIVVSRIGD 70
+G S ++ ++ D + +S++KA + M+ +V +
Sbjct: 101 TGASDRSPTEQNQARGENADAEAQAAAQIASVEKALTALGGESMTMEAALRHVVTKVTDE 160
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF---PSTVIAIQSHTDSIGT---LK 124
+ I P+L+ IA +L + S +A+ + +
Sbjct: 161 GLVIEIFDLQEAPLFAEGTDDPQPVLRDIAKMLAEVLGLASNSVAVNGYVKAYPIMMIDN 220
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S RA ++ + G+ +NR + G+A P+ + T + N R+E+ +
Sbjct: 221 PVWDLSAARAQAMRDLIQTAGLPANRVQRISGYADHKPVTADPTAI---RNNRVEVILLR 277
Query: 185 RG 186
R
Sbjct: 278 RD 279
>gi|85374663|ref|YP_458725.1| putative outer membrane lipoprotein [Erythrobacter litoralis
HTCC2594]
gi|84787746|gb|ABC63928.1| putative outer membrane lipoprotein [Erythrobacter litoralis
HTCC2594]
Length = 242
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 3/123 (2%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ S L +L +A L +IAI HTD+ G N
Sbjct: 113 QDDVQAILTARTLRFEESSAALAAGGTELLDEVAAALRPCYGAIIAITGHTDTSGDEPAN 172
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+++S+ RA ++ L+ R + + G P+ D N+RIE + +
Sbjct: 173 IVLSRRRAAAVERALVAR-GVPEESLRINGLGSSQPVQGLDPAD--PANRRIEFSVVAKQ 229
Query: 187 NIK 189
++
Sbjct: 230 RVR 232
>gi|83941931|ref|ZP_00954393.1| OmpA domain protein [Sulfitobacter sp. EE-36]
gi|83847751|gb|EAP85626.1| OmpA domain protein [Sulfitobacter sp. EE-36]
Length = 520
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 7/108 (6%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
V L+ + +Q +A L ++ + + +D G N I+ RA+ ++
Sbjct: 413 FEAGSVRLDAQSRSNVQQLARALEVGQYDARRLLFVGFSDGQGASFANRDIALRRAEAVR 472
Query: 139 SYLIQRGVSSNRFISVR----GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+I + V F P+ +DT GRQ N+R+E+ +
Sbjct: 473 QAVITAA-VTANLERVTLDLDAFGEAMPMACDDTAWGRQANRRVEVWV 519
>gi|255101058|ref|ZP_05330035.1| hypothetical protein CdifQCD-6_09624 [Clostridium difficile
QCD-63q42]
Length = 210
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 55/162 (33%), Gaps = 15/162 (9%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH-VSFVSEVFLEKKFL 93
I + + +GI V + + L+ +
Sbjct: 40 SESISGSVEQDLAKNVNASVEETFKKSGIPVKVDKSNGQVTFGEKTMFDIDSDVLKPEAK 99
Query: 94 PMLQLIA-----TILNKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI---- 142
ML++ TI + I I+ HTD +G+ NL +SQ RA + +++
Sbjct: 100 EMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDVGSYIYNLDLSQRRAYSVAKFIVGDEI 159
Query: 143 ---QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + I G + I D V R ++R+E++
Sbjct: 160 GDYKYKDKVTKHIIAIGRSKAELIKNGDNSVNRDASRRVELK 201
>gi|62999040|gb|AAY25026.1| major outer membrane protein [Aeromonas hydrophila]
Length = 344
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/152 (12%), Positives = 54/152 (35%), Gaps = 12/152 (7%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--P 107
+++ ++ + + + L+ + + L + + +F
Sbjct: 194 VAPAPAPVVEEAPAPAPQVVEKNFALNSDVLFAFGKDSLKPEGVAALNGLYQQIVEFQPK 253
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI---- 163
+ +TD IG+ N +S+ RA + ++L+ + + ++V G P+
Sbjct: 254 DGNAVVVGYTDRIGSDAYNQKLSEARARTVANFLVSK-GMAASKVAVEGRGEANPVTGTK 312
Query: 164 -----DTNDTKVGRQNNQRIEIQIFPRGNIKK 190
++RIE+++ ++K
Sbjct: 313 CNGVKAKAQLISCLAPDRRIEVRVSGVQEVQK 344
>gi|77456741|ref|YP_346246.1| flagellar motor protein MotB [Pseudomonas fluorescens Pf0-1]
gi|77380744|gb|ABA72257.1| chemotaxis MotB protein [Pseudomonas fluorescens Pf0-1]
Length = 355
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 50/141 (35%), Gaps = 9/141 (6%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ Q ++ G I + + L+ F +L +A + P+
Sbjct: 135 NPQLQKFKDQILFEITPNGLRIQIMDAENRPMFDSGSARLKPYFEDILLAMADTIKAVPN 194
Query: 109 TVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I+I HTD+ N +S RA+ + L+ ++ V G+A +
Sbjct: 195 -KISISGHTDAKPYVGNGDFGNWELSANRANAARRALVAGSYPDSQVARVVGYASSA-LF 252
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
+ N+RI+I + +
Sbjct: 253 DKENPFN-PVNRRIDIVVLTK 272
>gi|28901412|ref|NP_801067.1| chemotaxis LafU protein [Vibrio parahaemolyticus RIMD 2210633]
gi|260362966|ref|ZP_05775835.1| chemotaxis protein LafU [Vibrio parahaemolyticus K5030]
gi|260880253|ref|ZP_05892608.1| chemotaxis protein LafU [Vibrio parahaemolyticus AN-5034]
gi|260895370|ref|ZP_05903866.1| chemotaxis protein LafU [Vibrio parahaemolyticus Peru-466]
gi|1346409|sp|Q03478|LAFU_VIBPA RecName: Full=Chemotaxis protein LafU
gi|677910|gb|AAA62355.1| LafU [Vibrio parahaemolyticus]
gi|1518954|gb|AAB07358.1| lateral flagellar MotB [Vibrio parahaemolyticus]
gi|28809959|dbj|BAC62900.1| chemotaxis LafU protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308085707|gb|EFO35402.1| chemotaxis protein LafU [Vibrio parahaemolyticus Peru-466]
gi|308092138|gb|EFO41833.1| chemotaxis protein LafU [Vibrio parahaemolyticus AN-5034]
gi|308111945|gb|EFO49485.1| chemotaxis protein LafU [Vibrio parahaemolyticus K5030]
Length = 330
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 68/172 (39%), Gaps = 11/172 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + DT +++ + Q + + V+ G I
Sbjct: 108 GDGDGPEINSLVPGTFDTQEQLAALAKVIEEMTAQINAQ-GNVNVTVTPQGLRIVLQDDY 166
Query: 78 -VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQ 131
H+ L F +L +A + + + +I I HTD+I ++N +S
Sbjct: 167 KQHMFSRGGAELTPFFEDLLLALAPLFEQVTNPLI-ISGHTDAIPFKKRFGRQSNWALSA 225
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RADV + L++ G+ +R + V G + + + N + N+RIE+ I
Sbjct: 226 SRADVARKTLVEGGMPDDRVMQVTGMSDRALL--NPDEPDSSENRRIELFIL 275
>gi|261340281|ref|ZP_05968139.1| chemotaxis MotB protein [Enterobacter cancerogenus ATCC 35316]
gi|288317370|gb|EFC56308.1| chemotaxis MotB protein [Enterobacter cancerogenus ATCC 35316]
Length = 309
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 65/184 (35%), Gaps = 20/184 (10%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMI 72
++K + N ++ + + L K + ++ I + + G I
Sbjct: 92 TQQKGEVKKEPNIDELKKRMEQARLKKVRGDLDQLIEADPKLRALRPHLKIDLVQEGLRI 151
Query: 73 TC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
+ +E +L+ IA +LN P+ +++ HTD +
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPN-RVSLSGHTDDFPYANGEKGYS 210
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + V G A + N+RI + + +
Sbjct: 211 NWELSADRANASRRELVAGGLDDGKVLRVVGMAATMRLTDRGPDD--AINRRISLLVLNQ 268
Query: 186 GNIK 189
+
Sbjct: 269 QAEQ 272
>gi|253990525|ref|YP_003041881.1| hypothetical protein PAU_03051 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211638903|emb|CAR67518.1| similar to putative exported protein [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253781975|emb|CAQ85139.1| similar to putative exported protein [Photorhabdus asymbiotica]
Length = 67
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+V G P+ TN T GR N+R+EI++ P
Sbjct: 4 AVIGEGATRPVATNSTAAGRAANRRVEIRLVPNA 37
>gi|170702223|ref|ZP_02893126.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170132858|gb|EDT01283.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 233
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 80/230 (34%), Gaps = 51/230 (22%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV--------------------- 39
M+K + ++ ++ C AS + D
Sbjct: 1 MLKTFVSAALTVSMLAACSSASGPTFNAYAIDLADGSRAYRVECHGLFESSNACMRAAQR 60
Query: 40 --NKRFGSSLDKAE--DEFQMQLQDTGIVVSRIG--------------DMITCYIPVHVS 81
+ LD+ + + ++ D G + + G + +
Sbjct: 61 VCGDQPVRPLDRLQRLSDPAQKIDDPGAMTFQCGVPPQLVVATPAPVAEKPIVLAADALF 120
Query: 82 FVSEVF---LEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ + L IA+ L+ PS + + +TD +G+ + N +SQ RA+ +
Sbjct: 121 AFDKADVDAIKPEGRAELDEIASKLSAAPSVRHVDVVGYTDRLGSDEYNAALSQRRAETV 180
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDT----NDTKVGR--QNNQRIEIQ 181
K YL +GV++ I RG P N ++ R ++R+EI+
Sbjct: 181 KWYLTSQGVTAQ--IDARGDGKVLPGTACEMRNRAELIRCLAPDRRVEIR 228
>gi|163800113|ref|ZP_02194014.1| chemotaxis LafU protein [Vibrio sp. AND4]
gi|159175556|gb|EDP60350.1| chemotaxis LafU protein [Vibrio sp. AND4]
Length = 330
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 15/174 (8%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + + + DT +DK + + V+ + +
Sbjct: 108 GDGDGPEMDSLIPGNFDTQEQLALLAKVIDKVVGQIS---AQDNVNVTITPQGLRIVLQD 164
Query: 79 HV----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLI 129
L F +L +A + + + +I I HTDS K+N +
Sbjct: 165 DYMQHMFNRGGAELTPFFEDLLLALAPVFERINNPLI-ISGHTDSTPFKQRVGRKSNWAL 223
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S RADV ++ L++ G+ +R + V G + + + N + N+RIE+ I
Sbjct: 224 SASRADVARNTLVEGGMPDDRVMQVTGMSDRALL--NREEPDSSENRRIELFIL 275
>gi|114332455|ref|YP_748677.1| OmpA/MotB domain-containing protein [Nitrosomonas eutropha C91]
gi|114309469|gb|ABI60712.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91]
Length = 231
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L+ + L + L +I +TD IG+ N +S RA+ +
Sbjct: 111 DALFDFDKAVLKPAGMQALDDFSRNLEGVNYDLIIAVGYTDRIGSEAYNKKLSVRRAEAV 170
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTND---TKVGR------QNNQRIEIQI 182
K+YL+ +G+ ++R + G P+ + TK R ++R+EI++
Sbjct: 171 KNYLVSKGIGADRIFT-DGKGKANPVTGDSCQGTKATRTLINCLAPDRRVEIEV 223
>gi|332293247|ref|YP_004431856.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332171333|gb|AEE20588.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 275
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 18/117 (15%)
Query: 79 HVSFVSEVF--LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI------- 129
V F L + L+ + L +P+ I I H + L
Sbjct: 164 GVFFKGGTDKMLGSSSVITLRKVVRFLEGYPTRKILITGHICCSPDREPQLDGYNNRTGS 223
Query: 130 ---SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
S++R ++ YLI + S + RG AY P+D +T N+R+E+ I
Sbjct: 224 MTLSEDRGKMVYDYLI-KNGISAGRLKYRGKAYTEPLDWEET-----KNRRVEMTIL 274
>gi|126699538|ref|YP_001088435.1| hypothetical protein CD1929 [Clostridium difficile 630]
gi|255306922|ref|ZP_05351093.1| hypothetical protein CdifA_10067 [Clostridium difficile ATCC 43255]
gi|115250975|emb|CAJ68804.1| putative membrane protein [Clostridium difficile]
Length = 210
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 15/162 (9%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH-VSFVSEVFLEKKFL 93
I + + +GI V + V L+ +
Sbjct: 40 SESISGSVEQDLAKNVNASVEETFKKSGIPVKVDKSNGQVTFGEKTMFDVDSDVLKPEAK 99
Query: 94 PMLQLIA-----TILNKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI---- 142
ML++ TI + I I+ HTD +G+ NL +SQ RA + +++
Sbjct: 100 EMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDVGSYIYNLDLSQRRAYSVAKFIVGDEI 159
Query: 143 ---QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + I G + I D V R ++R+E++
Sbjct: 160 GDYKYKDKVTKHIIAIGRSKAELIKNGDNSVNRDASRRVELK 201
>gi|300313508|ref|YP_003777600.1| hypothetical protein Hsero_4223 [Herbaspirillum seropedicae SmR1]
gi|300076293|gb|ADJ65692.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 161
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 42/144 (29%), Gaps = 20/144 (13%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL----PMLQLIATILNKFPSTVIAIQ 114
Q +V+ + + +E + + + IA L + P+ I ++
Sbjct: 15 QGAASLVAVDTEAGKITLKEGAFRRGSACVESEAKAAFAQVEERIAEYLQQNPAGRIYVE 74
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN--------------RFISVRGFAYK 160
HTD + + + + R + V G+
Sbjct: 75 GHTDDKPVKAPVTDVRAFCTVYDDNITLSAARARQARLLLVGRSSPEAARRVIVAGYGDS 134
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFP 184
P+ + N+R+E++
Sbjct: 135 QPL--PGLAASDERNRRVEVRFVS 156
>gi|194434087|ref|ZP_03066356.1| chemotaxis protein MotB [Shigella dysenteriae 1012]
gi|300951513|ref|ZP_07165348.1| chemotaxis protein MotB [Escherichia coli MS 116-1]
gi|194417631|gb|EDX33731.1| chemotaxis protein MotB [Shigella dysenteriae 1012]
gi|300449263|gb|EFK12883.1| chemotaxis protein MotB [Escherichia coli MS 116-1]
gi|332095082|gb|EGJ00116.1| chemotaxis protein motB [Shigella dysenteriae 155-74]
Length = 308
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ GV S + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGVDSGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|296136329|ref|YP_003643571.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
gi|294340565|emb|CAZ88950.1| putative OmpA/MotB precursor [Thiomonas sp. 3As]
gi|295796451|gb|ADG31241.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
Length = 230
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 11/114 (9%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ L L +A + V+ +TDS G++ N +S RA+ +
Sbjct: 111 DAFFQFNKAVLLPAGKEKLDDLAGKIKAINLEVVIATGYTDSFGSVAYNQKLSVRRAEAV 170
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--------KVGRQNNQR--IEIQ 181
K+YL+ + I V G + + N+R +E+
Sbjct: 171 KAYLVSQ-GVPADKIYVEGKGKTDFRVDPKSCKGSFKSQVECQAPNRRTVVEVV 223
>gi|258541844|ref|YP_003187277.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01]
gi|256632922|dbj|BAH98897.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01]
gi|256635979|dbj|BAI01948.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-03]
gi|256639034|dbj|BAI04996.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-07]
gi|256642088|dbj|BAI08043.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-22]
gi|256645143|dbj|BAI11091.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-26]
gi|256648198|dbj|BAI14139.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-32]
gi|256651251|dbj|BAI17185.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654242|dbj|BAI20169.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-12]
Length = 411
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 8/110 (7%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS-------HTDSIGTLKNNLLISQ 131
+ L + ++ + A T I + H + N+ +S
Sbjct: 301 VFFDWDKSDLTDRARSIVGVAAQAAAHVALTRITVSGYTDNSSAHPGQKAGEEYNMRLSL 360
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA+V+K+ + R I + G+ +P+ T N+R+EI
Sbjct: 361 RRAEVVKAE-LMRDGVPGTTIDIHGYGETHPLVTTGPNTKEAQNRRVEII 409
>gi|90423604|ref|YP_531974.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
gi|90105618|gb|ABD87655.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 275
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 58/178 (32%), Gaps = 19/178 (10%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMI- 72
+ + + A + LQD I+ + +
Sbjct: 89 ASNTPNPDEAGDSKAAGAQTQAEREFALASASLRQALQDLPELTELSKNIMFEETKEGLN 148
Query: 73 --TCYIPVHVSFVSEVFLE-KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKN 125
F + ++ ++Q +A L P ++I HT + N
Sbjct: 149 LEIIDQDGRSMFADGSKVPFERTRLLIQKLAAPLRATP-LRVSIVGHTSAGLMPGRTDYN 207
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S +RA+ ++ L + G+ ++ +V G A P+ +D N+R+ I +
Sbjct: 208 AFDLSSDRANAVRQILEREGLPTSHVFAVSGKADSQPLFPDDPM--LAANRRVTITLM 263
>gi|71906362|ref|YP_283949.1| flagellar motor protein MotB [Dechloromonas aromatica RCB]
gi|71845983|gb|AAZ45479.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 316
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 56/150 (37%), Gaps = 10/150 (6%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATI 102
+ + + + + ++ G I + + S L+ +L+ I
Sbjct: 134 EKMIEQSPQLAQFKKQMLLDITSEGLRIQIVDEQNRPMFDSSSADLKPYTRDILRQIGKA 193
Query: 103 LNKFPSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
LN + I++ HTD+ +N +S RA+ + L+ G+ ++ + V G
Sbjct: 194 LNGVSN-RISLAGHTDAAQFAGGEKGFSNWELSANRANASRRELVVGGMDDSKVLRVVGL 252
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
A D ND N+RI I + +
Sbjct: 253 ASTVLFDKNDPL--NSVNRRISIVVLNQKT 280
>gi|330811342|ref|YP_004355804.1| hypothetical protein PSEBR_a4391 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379450|gb|AEA70800.1| Conserved hypothetical protein; putative exported protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 325
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 2/103 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
L+ LQ++ + PS + + H+D+ G N +S+
Sbjct: 171 VKQTQIGFPGEAAELDAHAKAQLQVMLDFIKADPSVNHVELDGHSDNSGNRLTNRELSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
RA ++ + I++R +YP+ N R N
Sbjct: 231 RALAVQDFFKAN-GFQESQITLRFHGERYPLVPNTNAANRAKN 272
>gi|329114380|ref|ZP_08243142.1| Outer membrane protein [Acetobacter pomorum DM001]
gi|326696456|gb|EGE48135.1| Outer membrane protein [Acetobacter pomorum DM001]
Length = 452
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 8/110 (7%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS-------HTDSIGTLKNNLLISQ 131
+ L + ++ + A T I + H + N+ +S
Sbjct: 342 VFFDWDKSDLTDRARSIVGVAAQAAAHVALTRITVSGYTDNSSAHPGQKAGEEYNMRLSL 401
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RA+V+K+ + R I + G+ +P+ T N+R+EI
Sbjct: 402 RRAEVVKAE-LMRDGVPGTTIDIHGYGETHPLVTTGPNTKEAQNRRVEII 450
>gi|170739237|ref|YP_001767892.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
gi|168193511|gb|ACA15458.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
Length = 227
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 49/164 (29%), Gaps = 9/164 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE--DEFQMQLQDTGIVVSRIGDMITCYI 76
+ + S LD + VS I I
Sbjct: 55 ATGPTRSLSTSVRGEAASAGALGEDRSFLDSLRNRASLTPSERSKLAAVSADKPSIDLEI 114
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATIL--NKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
P + + K LPM++ + L + I HTD G + N +S+ RA
Sbjct: 115 P---FDYNSAKIGPKALPMVKSLGAALARQELKGNTFLIVGHTDGKGKDQANQALSERRA 171
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+K Y++Q + G+ D + N+R+
Sbjct: 172 QAVKDYIVQNYGVPATNLVSVGYGKTQLKDAANPNA--PVNRRV 213
>gi|260890422|ref|ZP_05901685.1| fibronectin-binding protein [Leptotrichia hofstadii F0254]
gi|260860042|gb|EEX74542.1| fibronectin-binding protein [Leptotrichia hofstadii F0254]
Length = 149
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKF-PSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L + ++ I LNK+ S I + HTDS G+ K+NL +S+ RA
Sbjct: 36 FNIDGNVLNESEASTIREIVNDLNKYGKSGTIDVIGHTDSTGSQKHNLKLSETRAKNFAR 95
Query: 140 YLIQRGVSSNRFI-SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + G+ ++G P+DT+D GR NN+R+EI +
Sbjct: 96 LMREFGLDKRFSFGKIKGGGANSPVDTDDRVEGRYNNRRVEILL 139
>gi|167950585|ref|ZP_02537659.1| OmpA/MotB [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 83
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
GT + N +S+ RA+ + +L +GV + R I V G P +++T+ RQ N+R+EI
Sbjct: 6 GTAEYNQHLSERRAENVAYFLEDQGVPAAR-IRVEGRGRSEPRASHETEGDRQLNRRVEI 64
Query: 181 QIFPRGNIKK 190
+ P IKK
Sbjct: 65 YVRP---IKK 71
>gi|83855407|ref|ZP_00948937.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
gi|83843250|gb|EAP82417.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
Length = 520
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 7/108 (6%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
V L+ + +Q +A L ++ + + +D G N I+ RA+ ++
Sbjct: 413 FEAGSVRLDAQSRSNVQQLARALEVGQYDARRLLFVGFSDGQGASFANRDIALRRAEAVR 472
Query: 139 SYLIQRGVSSNRFISVR----GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+I + V F P+ +DT GRQ N+R+E+ +
Sbjct: 473 QAVITAA-VTANLERVTLDLDAFGEAMPMACDDTAWGRQANRRVEVWV 519
>gi|153948417|ref|YP_001399654.1| hypothetical protein YpsIP31758_0662 [Yersinia pseudotuberculosis
IP 31758]
gi|152959912|gb|ABS47373.1| flagellar motor protein B [Yersinia pseudotuberculosis IP 31758]
Length = 303
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 62 GIVVSRIGDMITCY--IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V G I + + S L F +L +A N+ I I HTD+
Sbjct: 150 QMEVVPQGLRILIQDDLQRDMFQRSSAVLTPFFSRLLGELAPAFNEM-DNKIIITGHTDA 208
Query: 120 IGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
N +S ERA + L+ G+ R + + A + +D D N
Sbjct: 209 SRYRDQLLYNNWNLSGERALMAHKALVSGGLDKGRVLQINAMADQMLLDPTDPLA--AKN 266
Query: 176 QRIEIQIFPR 185
+RIEI + +
Sbjct: 267 RRIEIMVLTK 276
>gi|319781670|ref|YP_004141146.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167558|gb|ADV11096.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 445
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/191 (23%), Positives = 67/191 (35%), Gaps = 24/191 (12%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-----SLDKAEDEFQMQLQD------ 60
T ++G K V + V G + KA + + QL D
Sbjct: 253 ATALAGETKPDGTKAAVAKAEPEAQKAVQPDIGEKAPTAAAVKAAADVKRQLADAFKPGD 312
Query: 61 ---TGIVVSRIGDMITCYIPVHVSF----VSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
G+ V + I + F V ++ + ++ I I+N T I+I
Sbjct: 313 KLHDGVSVEATDKGVVISITDQLDFGMFEVGSALPRRELVLAMEKIGRIVNSQKGT-ISI 371
Query: 114 QSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
HTD+ + N +S RA L++ GV R V GFA + P D
Sbjct: 372 NGHTDARPFRSDSYDNWRLSTARAHSAYYMLVRGGVDERRITEVAGFADRQPKIAADPLA 431
Query: 171 GRQNNQRIEIQ 181
N+RIEI
Sbjct: 432 --AANRRIEIL 440
>gi|295691255|ref|YP_003594948.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295433158|gb|ADG12330.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
Length = 406
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L + ++ A N +T I + HTD+ G+ K N+ +S+ RA +
Sbjct: 302 VYFPFDQSVLTPEAQSVVTEAAKYSNDGKATKIIVVGHTDTSGSPKYNVKLSERRAKAVA 361
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + S + V P V N+R I I
Sbjct: 362 DALVSQ-GVSKDVLGVDWKGESAPAVATGDGVKEPLNRRSTISI 404
>gi|167626173|ref|YP_001676467.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167356195|gb|ABZ78808.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 336
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 10/143 (6%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLPMLQLIATIL 103
+ + + + + + + + +V ++ F +L + +L
Sbjct: 149 KEIDKVIENVSMSANVELQVVPQGVRILMHDNVNQFMFTRGSADMKPYFEDLLMALGPLL 208
Query: 104 NKFPSTVIAIQSHTDSIGTL---KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
++ + I I HTDS N +S +RA + + L G+ ++ I V G A +
Sbjct: 209 SQVEN-KITISGHTDSSPYAGKKFTNWELSSKRALLARRVLEYGGLRRHQVIQVTGMADQ 267
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P D N+RIE+ +
Sbjct: 268 APYVIKDPAA--AANRRIEVLVM 288
>gi|256820385|ref|YP_003141664.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256581968|gb|ACU93103.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 397
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 3/163 (1%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG-DMITCYIPVH 79
S K + + V S L+ ++ + + D+I
Sbjct: 236 KSEVANKQNKMNDANGNNVPDEIESYLNDNYKAKDKVGENGEVKDDDVAADLIRKGYINA 295
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + + +A + P+ I I + D +G + N +SQ+RAD +K
Sbjct: 296 YFDFNSSKPQISSSWAVDFVAKYMKSNPNAHININGYADELGGTQYNQTLSQKRADAVKD 355
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L++ G+ +R I+ G +D N ++ RQ ++ ++
Sbjct: 356 LLVKAGIDGSR-ITAEGKGVDASVDKNSSRA-RQLARKTTFEL 396
>gi|120603950|ref|YP_968350.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|120564179|gb|ABM29923.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
Length = 364
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 16/149 (10%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTV 110
Q G+ G + I V F E L K+ +L A L
Sbjct: 94 KATLDGAQGKGVDFFDNGSVQILSIDADVLFGPGETRLSKEGERLLATFAPTLRTI-EHP 152
Query: 111 IAIQSHT-------------DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ + H + GTL + ++S RA + L GV S+R I + GF
Sbjct: 153 LLVAGHASPPRDEQGAGFRLRAEGTLSPSWMLSLRRATSVYRALRDLGVPSSRLI-LEGF 211
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+P T GR+ N+R+++ + R
Sbjct: 212 GDGHPRHDAFTATGRRANRRVDLVLDKRN 240
>gi|325925657|ref|ZP_08187038.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
perforans 91-118]
gi|325543930|gb|EGD15332.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
perforans 91-118]
Length = 425
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 9/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
+ + Q + + V D + F V +E + ++ IA + +
Sbjct: 283 RLKQLLSAQERAGLLRVDEQADGQTRVRLSSAAMFASGGVEVEPQQRGLIAQIAAAIEQL 342
Query: 107 PSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P VI + HTD + ++N +S RA + L + + R ++ G P
Sbjct: 343 PGRVIVV-GHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVDAI-GAGDSQP 400
Query: 163 ID-TNDTKVGRQNNQRIEIQIFP 184
I R N+R+EI P
Sbjct: 401 IARPVQLPANRARNRRVEILFQP 423
>gi|310818068|ref|YP_003950426.1| chemotaxis MotB protein [Stigmatella aurantiaca DW4/3-1]
gi|309391140|gb|ADO68599.1| chemotaxis MotB protein [Stigmatella aurantiaca DW4/3-1]
Length = 284
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 9/144 (6%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDM--ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + +L + IG + + L + +L +L
Sbjct: 111 LTAKLKEELTRGDAWLDAIGTEALRLELSERLLFEPGQSNLTPRGTEVLARAGAVLAAVE 170
Query: 108 STVIAIQSHTDSIGTLKN------NLLISQERADVIKSYLIQRG-VSSNRFISVRGFAYK 160
+ + +HTD + + +S RA + L + + +S G A
Sbjct: 171 GHTVEVAAHTDELPVPAEAETEGTSWELSTARAATVVRALHEGPARLAQERLSATGHASF 230
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFP 184
P+ +D+ V R N+R+ + + P
Sbjct: 231 RPVVPSDSPVNRLRNRRVTLMLRP 254
>gi|16127724|ref|NP_422288.1| OmpA family protein [Caulobacter crescentus CB15]
gi|221236545|ref|YP_002518982.1| cell surface antigen Sca2 [Caulobacter crescentus NA1000]
gi|13425220|gb|AAK25456.1| OmpA family protein [Caulobacter crescentus CB15]
gi|220965718|gb|ACL97074.1| cell surface antigen Sca2 [Caulobacter crescentus NA1000]
Length = 449
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L + ++ A N +T I + HTD+ G+ K N +S+ RA +
Sbjct: 345 VYFPFDQSVLTPEAQSVVTEAAKYSNDGKATKIIVVGHTDTSGSPKYNAKLSERRARAVA 404
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + S + V P V N+R I I
Sbjct: 405 DALVSQ-GVSQNVLGVDWKGESAPAVATGDGVKEPLNRRSTISI 447
>gi|260890421|ref|ZP_05901684.1| OmpA family protein [Leptotrichia hofstadii F0254]
gi|260860041|gb|EEX74541.1| OmpA family protein [Leptotrichia hofstadii F0254]
Length = 180
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 96 LQLIATILNKF-PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF--I 152
L+ IA +LN + I HTDS G+ K+NL +S ERA L++ RF +
Sbjct: 79 LKYIANMLNTHIEKGSLEIIGHTDSTGSKKHNLKLSLERAINAAK-LLREYGLDKRFSVV 137
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G + P+DTN+T GR NN+RIEI +
Sbjct: 138 KIIGKGGEEPMDTNETVEGRYNNRRIEIIL 167
>gi|56694983|ref|YP_165329.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56676720|gb|AAV93386.1| OmpA domain protein [Ruegeria pomeroyi DSS-3]
Length = 518
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 51/146 (34%), Gaps = 13/146 (8%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--------SFVSEVFLEKKFLPMLQLIAT 101
+ + G V + + + + +A
Sbjct: 372 QGNRLANAIAAAGTEVPLTELQRLVSTLSGMQRLSLSFRFETGSSRPDAQSRTNISQLAQ 431
Query: 102 ILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ--RGVSSNRF-ISVRG 156
L + + + +D G + N I+ +RA+ ++ ++Q + R +SV
Sbjct: 432 ELESGAYDARQLLFVGFSDGDGAAEGNTRIALKRAEAVRDAVLQTAETLDPARVEVSVDA 491
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
F P+ +D+ GRQ N+R+E+ +
Sbjct: 492 FGEALPMACDDSDWGRQVNRRVEVWV 517
>gi|78049766|ref|YP_365941.1| hypothetical protein XCV4210 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78038196|emb|CAJ25941.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 418
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 9/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
+ + Q + + V D + F V +E + ++ IA + +
Sbjct: 276 RLKQLLSAQERAGLLRVDEQADGQTRVRLSSAAMFASGGVEVEPQQRGLIAQIAAAIEQL 335
Query: 107 PSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P VI + HTD + ++N +S RA + L + + R ++ G P
Sbjct: 336 PGRVIVV-GHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVDAI-GAGDSQP 393
Query: 163 ID-TNDTKVGRQNNQRIEIQIFP 184
I R N+R+EI P
Sbjct: 394 IARPVQLPANRARNRRVEILFQP 416
>gi|330830630|ref|YP_004393582.1| major outer membrane protein OmpAI [Aeromonas veronii B565]
gi|328805766|gb|AEB50965.1| Major outer membrane protein OmpAI [Aeromonas veronii B565]
Length = 339
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 49/125 (39%), Gaps = 12/125 (9%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + + L + + +F + +TD IG+ N +S+ RA
Sbjct: 216 SDVLFAFGKDTLKPEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRIGSDAYNQKLSEARA 275
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI----DTNDTK-----VGRQNNQRIEIQIFPR 185
+ ++L+ + + +++ G P+ T ++R+E+++
Sbjct: 276 RTVANFLVSK-GMAASKVAIEGRGEANPVTGTKCNGVTAKAQLISCLAPDRRVEVRVSGV 334
Query: 186 GNIKK 190
+++
Sbjct: 335 QEVQQ 339
>gi|298370128|ref|ZP_06981444.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281588|gb|EFI23077.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 298
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 51/162 (31%), Gaps = 13/162 (8%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ + + + + + + + ++
Sbjct: 134 QSVSPEQAEAEMKGVKRQNHTLSRVVSKDKCAQVLKKYNLQASALFKFDRSGYQDMLEQG 193
Query: 93 LPMLQLIATILNKFPS--TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+ I+ + + P+ T + + HTD G + N +S +RA +K +
Sbjct: 194 KREVSTISQDIKQNPAAVTSVNVVGHTDPEGKPEYNDALSVKRAQTVKQ-ALSSSGLDGN 252
Query: 151 FISVRGFAYKYPIDTN------DTKVGRQN----NQRIEIQI 182
IS +G + + TN R+ N+R+EI +
Sbjct: 253 IISTQGKGERELVVTNCRKRFPKNAKAREKCDQPNRRVEIIL 294
>gi|300023926|ref|YP_003756537.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299525747|gb|ADJ24216.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 262
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 56/152 (36%), Gaps = 1/152 (0%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
++ GS D E ++ + + S L
Sbjct: 76 PEAARARRALSSLGSDGDTEEGRAAIRADEAERTAEYRHAFLISVGDRVFFAESSAELGG 135
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+ L +++ A L P+ I + +D G ++ +S++RA+ ++ LI G+ ++R
Sbjct: 136 RALAIIEGQARWLKLRPNLTITVIGRSDDGGDRRSAQTLSKQRAEAVRDRLIAAGLDASR 195
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ +R + T + R N+ E+ I
Sbjct: 196 -VDLRPTGNDDKVAVCSTSMCRAQNRNAEVFI 226
>gi|226953610|ref|ZP_03824074.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|226835644|gb|EEH68027.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
Length = 79
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 39/79 (49%)
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+ +A L ++P+ I+ HTD+ G N +S RA+ +KS L+ +
Sbjct: 1 KSEIAKVAEKLAEYPNATARIEGHTDNTGPRALNERLSLARANSVKSALVNEYNVDASRL 60
Query: 153 SVRGFAYKYPIDTNDTKVG 171
S +GFA+ PI N TK G
Sbjct: 61 STQGFAWDQPIADNKTKEG 79
>gi|150396796|ref|YP_001327263.1| OmpA/MotB domain-containing protein [Sinorhizobium medicae WSM419]
gi|150028311|gb|ABR60428.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419]
Length = 720
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLL 128
+ + ++ +A +NK P I+ HTD++G ++NL+
Sbjct: 598 RIDLDTITFATGSAEVSMSQAKTMRKVAEAMNKVLEKDPGETFFIEGHTDAVGADQSNLV 657
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
+S ERA+ + L + + +G+ ++ D Q N+R+ I ++ P
Sbjct: 658 LSDERAESVAVLLTEVYGVPAENLVTQGYGERFLKIRTDGPE--QENRRVTIRRVTP 712
>gi|256022446|ref|ZP_05436311.1| flagellar motor protein MotB [Escherichia sp. 4_1_40B]
gi|300917528|ref|ZP_07134185.1| chemotaxis protein MotB [Escherichia coli MS 115-1]
gi|300415233|gb|EFJ98543.1| chemotaxis protein MotB [Escherichia coli MS 115-1]
Length = 308
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|212637803|ref|YP_002314328.1| MotB protein [Shewanella piezotolerans WP3]
gi|212559287|gb|ACJ31741.1| MotB protein [Shewanella piezotolerans WP3]
Length = 330
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 10/142 (7%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLPMLQLIATILN 104
+ E + + + + + + ++ ++ F +L + IL
Sbjct: 150 EIEQVITDVSMNANVELQVVPQGVRILMHDNINQFMFTRGSSNMKPYFEDLLMALGPILG 209
Query: 105 KFPSTVIAIQSHTDSIGTL---KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
K + ++I HTDS N +S +RA + + L GV ++ I V G A +
Sbjct: 210 KVEN-KMSISGHTDSSPYAGKTFTNWELSSKRALLARRVLEYSGVQRDQVIQVTGMADQA 268
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
P +D N+RIE+ +
Sbjct: 269 PYIADDPAA--AANRRIEMLVM 288
>gi|13472587|ref|NP_104154.1| flagellar motor protein MotB [Mesorhizobium loti MAFF303099]
gi|14023333|dbj|BAB49940.1| flagellar motor protein; MotB [Mesorhizobium loti MAFF303099]
Length = 471
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 10/128 (7%)
Query: 61 TGIVVSRIGDMITCYIPVHVSF----VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G+ V + I + F V ++ + ++ I I+N T I+I H
Sbjct: 342 DGVSVEATDKGVVISITDQLDFGMFEVGSAVPSRELVLAMEKIGRIVNSQKGT-ISINGH 400
Query: 117 TDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
TD+ +N +S RA L++ GV R V GFA + P D D
Sbjct: 401 TDARPFRSASYDNWRLSTARAHSAYYMLVRGGVDERRITEVAGFADRQPKDPADPLS--A 458
Query: 174 NNQRIEIQ 181
N+RIEI
Sbjct: 459 ANRRIEIL 466
>gi|152984447|ref|YP_001351357.1| flagellar motor protein [Pseudomonas aeruginosa PA7]
gi|150959605|gb|ABR81630.1| flagellar motor protein [Pseudomonas aeruginosa PA7]
Length = 254
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 70/214 (32%), Gaps = 39/214 (18%)
Query: 5 LGLSMFIMTTISG---------CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+ ++ ++ ++ +E++ F + + + + LD+A + +
Sbjct: 24 IMSALLVIFILASVILILQLMEIQKELKERQVQFEQELVELKKAEQVRRTILDEAVEALR 83
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHV--SFVSEVFLEKKFLPMLQLIATILNKFPST---- 109
+ GI V + IP + + + I ++N+ S
Sbjct: 84 KR----GIKVEVSENHTVLSIPNDLLGFDTGAYDIHAAYQARALEIGKVINEVISREDRV 139
Query: 110 ----VIAIQSHTDSIG----TLKNNLLISQERADVIKSYL-----------IQRGVSSNR 150
I I+ HTD+ K N +S RA + + +
Sbjct: 140 EFLDTIFIEGHTDNRPLQGFMGKGNWGLSTFRAISLWQFWGSALSPDEQLARLKNKDGKP 199
Query: 151 FISVRGFAYKYPI-DTNDTKVGRQNNQRIEIQIF 183
SV G+ P+ T+ + N+RI+I+
Sbjct: 200 LFSVSGYGETRPVLVDQQTEDDFKRNRRIDIRFT 233
>gi|45442813|ref|NP_994352.1| hypothetical protein YP_3056 [Yersinia pestis biovar Microtus str.
91001]
gi|108809034|ref|YP_652950.1| hypothetical protein YPA_3043 [Yersinia pestis Antiqua]
gi|150260228|ref|ZP_01916956.1| lateral flagellar proton motor protein B [Yersinia pestis
CA88-4125]
gi|162420691|ref|YP_001604823.1| hypothetical protein YpAngola_A0200 [Yersinia pestis Angola]
gi|165924864|ref|ZP_02220696.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939072|ref|ZP_02227624.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
IP275]
gi|166008977|ref|ZP_02229875.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212177|ref|ZP_02238212.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398344|ref|ZP_02303868.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419079|ref|ZP_02310832.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167466315|ref|ZP_02331019.1| flagellar motor protein B [Yersinia pestis FV-1]
gi|170022980|ref|YP_001719485.1| hypothetical protein YPK_0731 [Yersinia pseudotuberculosis YPIII]
gi|218927933|ref|YP_002345808.1| hypothetical protein YPO0747 [Yersinia pestis CO92]
gi|229837433|ref|ZP_04457596.1| Flagellar motor rotation protein motB [Yersinia pestis Pestoides A]
gi|229840644|ref|ZP_04460803.1| Flagellar motor rotation protein motB [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842804|ref|ZP_04462956.1| Flagellar motor rotation protein motB [Yersinia pestis biovar
Orientalis str. India 195]
gi|294502809|ref|YP_003566871.1| flagellar motor protein [Yersinia pestis Z176003]
gi|45437679|gb|AAS63229.1| chemotaxis MotB protein [Yersinia pestis biovar Microtus str.
91001]
gi|108780947|gb|ABG15005.1| putative chemotaxis membrane protein [Yersinia pestis Antiqua]
gi|115346544|emb|CAL19421.1| putative chemotaxis membrane protein [Yersinia pestis CO92]
gi|149289636|gb|EDM39713.1| lateral flagellar proton motor protein B [Yersinia pestis
CA88-4125]
gi|162353506|gb|ABX87454.1| flagellar motor protein B [Yersinia pestis Angola]
gi|165913028|gb|EDR31653.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
IP275]
gi|165923064|gb|EDR40215.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992316|gb|EDR44617.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206923|gb|EDR51403.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166963073|gb|EDR59094.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167050848|gb|EDR62256.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|169749514|gb|ACA67032.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
gi|229690071|gb|EEO82128.1| Flagellar motor rotation protein motB [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697010|gb|EEO87057.1| Flagellar motor rotation protein motB [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229705556|gb|EEO91566.1| Flagellar motor rotation protein motB [Yersinia pestis Pestoides A]
gi|262360841|gb|ACY57562.1| flagellar motor protein [Yersinia pestis D106004]
gi|262364786|gb|ACY61343.1| flagellar motor protein [Yersinia pestis D182038]
gi|294353268|gb|ADE63609.1| flagellar motor protein [Yersinia pestis Z176003]
Length = 303
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 47/130 (36%), Gaps = 9/130 (6%)
Query: 62 GIVVSRIGDMITCYIPV--HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V G I + S L F +L +A N+ I I HTD+
Sbjct: 150 QMEVVPQGLRILIQDDQQRDMFQRSSAVLTPFFSRLLGELAPAFNEM-DNKIIITGHTDA 208
Query: 120 IGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
N +S ERA + L+ G+ R + + A + +D D N
Sbjct: 209 SRYRDQLLYNNWNLSGERALMAHKALVNGGLDEGRVLQINAMADQMLLDPTDPLA--AKN 266
Query: 176 QRIEIQIFPR 185
+RIEI + +
Sbjct: 267 RRIEIMVLTK 276
>gi|220923055|ref|YP_002498357.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219947662|gb|ACL58054.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
Length = 192
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 5/147 (3%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
D V + + LD + + + + + D + + + F + + L
Sbjct: 35 AVQDRVAREGQTFLDSLRNRTSLAAAERERLAALSADKPSIALDIPFDF-NSSRIGDAAL 93
Query: 94 PMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
P + + + L + + I I HTD G+ + N +S+ RA+ +K Y+++
Sbjct: 94 PQVSTLGSSLARPELRDSTILIVGHTDGKGSDRVNQRLSERRAEAVKQYIVRNYDVPGAN 153
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ G+ +N+ N+R+
Sbjct: 154 LISVGYGKSRLKVSNNPYA--AANRRV 178
>gi|160889745|ref|ZP_02070748.1| hypothetical protein BACUNI_02175 [Bacteroides uniformis ATCC 8492]
gi|270294032|ref|ZP_06200234.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317478785|ref|ZP_07937937.1| OmpA family protein [Bacteroides sp. 4_1_36]
gi|156860737|gb|EDO54168.1| hypothetical protein BACUNI_02175 [Bacteroides uniformis ATCC 8492]
gi|270275499|gb|EFA21359.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316905045|gb|EFV26847.1| OmpA family protein [Bacteroides sp. 4_1_36]
Length = 224
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 72/206 (34%), Gaps = 40/206 (19%)
Query: 18 CGLASR---------------------------EKKKVFLHKSNDTDIVNKRFGSSLDKA 50
CG + + G +DK
Sbjct: 20 CGTMNNKAKGGIIGGGSGAAAGAIIGGLIGKGKGAAIGAAVGAAVGTGAGVAIGHKMDK- 78
Query: 51 EDEFQMQLQDTGIVVSRIGDMI----TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+ +++ + + + + + + L + L+ +A IL +
Sbjct: 79 KAAEAAKIEGAQVEQVTDANGLPAVKVSFAAGILFGFNSAALSNEAKASLRELAQILKED 138
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
P+T IAI HTD +GT + N+ +S+ RA +++YL GVS +F V G Y N
Sbjct: 139 PTTDIAIIGHTDKVGTYEANMKVSKNRAYAVENYLQDCGVSPAQFKKVEGVGY------N 192
Query: 167 DTKVGRQ--NNQRIEIQIFPRGNIKK 190
+ N+R+E+ ++ + K
Sbjct: 193 EYDESLSADQNRRVEVYMYASEQMIK 218
>gi|86157306|ref|YP_464091.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85773817|gb|ABC80654.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 170
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 11/175 (6%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
+ + I+ + + G + + +
Sbjct: 4 LALAAVIT--LALAAPAAAQVPWDAAKKAAGQATVGKLEKEINRRLLEEGRKNQCSFKTD 61
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D + + +S + L + + HTD+ G+ +N
Sbjct: 62 NDQLEPGCDQKMKRLSNALV--DAKKRLNG-----AGVKNFKFVVSGHTDTSGSAAHNQE 114
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQRIEIQI 182
+S RA VI+ L+ RG+ SV G K P+ +DT + N+R E+Q+
Sbjct: 115 LSARRAAVIEKELVARGIPQAEIESV-GMGSKKPLVKPDDTPAKKAKNRRYELQV 168
>gi|325109023|ref|YP_004270091.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305]
gi|324969291|gb|ADY60069.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305]
Length = 242
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 46/152 (30%), Gaps = 6/152 (3%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+R L K + Q + + + L + L
Sbjct: 86 QSSGRRSEDGLKKRSKDSQGTVGKNETAERVNHGNVVTMGGPALFDPFSATLNESIRENL 145
Query: 97 QLIATILNKFPSTVIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
++A +L + I ++ H + +S RA+ + +YLI+
Sbjct: 146 DILAGVLKTRSNL-ICVRGHASPEPLPFDSPFADQFALSFARAEAVANYLIEDQKIPQER 204
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
I V P + +N+R+++ +
Sbjct: 205 IIVSAAGDTEPRMLSRDAEQMGSNRRVDVFLI 236
>gi|115374815|ref|ZP_01462090.1| flagellar motor protein MotB [Stigmatella aurantiaca DW4/3-1]
gi|115368211|gb|EAU67171.1| flagellar motor protein MotB [Stigmatella aurantiaca DW4/3-1]
Length = 261
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 9/144 (6%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDM--ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + +L + IG + + L + +L +L
Sbjct: 88 LTAKLKEELTRGDAWLDAIGTEALRLELSERLLFEPGQSNLTPRGTEVLARAGAVLAAVE 147
Query: 108 STVIAIQSHTDSIGTLKN------NLLISQERADVIKSYLIQRG-VSSNRFISVRGFAYK 160
+ + +HTD + + +S RA + L + + +S G A
Sbjct: 148 GHTVEVAAHTDELPVPAEAETEGTSWELSTARAATVVRALHEGPARLAQERLSATGHASF 207
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFP 184
P+ +D+ V R N+R+ + + P
Sbjct: 208 RPVVPSDSPVNRLRNRRVTLMLRP 231
>gi|34498443|ref|NP_902658.1| chemotaxis lafU protein [Chromobacterium violaceum ATCC 12472]
gi|34104298|gb|AAQ60657.1| chemotaxis lafU protein [Chromobacterium violaceum ATCC 12472]
Length = 328
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 78/191 (40%), Gaps = 19/191 (9%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNK---RFGSSLDKAEDEFQMQLQDTGIV------VS 66
+G AS+ + ++++ + + + L K + Q G+ ++
Sbjct: 100 AGSQAASKSAVRDSDKRASEQPELPRRSYDSEADLRKLAAQLSEMSQKAGLSSNLQTVIT 159
Query: 67 RIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI------QSHTD 118
G +T + +E +F +LQ I ++L + + ++ + Q H
Sbjct: 160 PYGLRVTLHDTDQQGMFERGSAIVEPRFRSLLQQIGSMLGEIDNRLLVVGHTDAAQYHRA 219
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+N +S RA + +++Q G++++ + V G A + P+D +G N+RI
Sbjct: 220 GGFAAMSNWSLSSNRAMAARLHMMQGGLAADSVLQVVGMAERAPLDKQH-PLG-AVNRRI 277
Query: 179 EIQIFPRGNIK 189
E+ + G +
Sbjct: 278 ELLVLTSGQAQ 288
>gi|115524024|ref|YP_780935.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115517971|gb|ABJ05955.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 272
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 19/182 (10%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMI 72
++ + D D + A + LQD ++ D +
Sbjct: 85 STNQASNTPSPDEGDNDSAKTKAEREFALASASLRQALQDMPELTEISKNVIFEETKDGL 144
Query: 73 TCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLK 124
I + + ++Q +A L P I+I HT + +
Sbjct: 145 NMEITDQDGRSMFAEGSKVPYDRTRLLVQRLAAPLRATP-LRISIAGHTSAGVVIGRSDY 203
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +S +RA+ ++ L + GV +++ +V G A P+ +D N+R+ I +
Sbjct: 204 NAFDLSSDRANAVRQILEREGVPTSQIYAVSGRADSQPLFPDD--ATLSANRRVTITLMR 261
Query: 185 RG 186
Sbjct: 262 EA 263
>gi|295699068|ref|YP_003606961.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295438281|gb|ADG17450.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 344
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 64/185 (34%), Gaps = 20/185 (10%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI----------VVSRIGDM 71
+ + V L + + + ++ + + ++ G
Sbjct: 109 GTKSQTEPTPPRAAMPAVTPMDAKRLQQLKAKLSALIEQSSVLNAFKDQIRISITNEGLR 168
Query: 72 ITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----- 124
I + + L+ + +L I LN I+I HTD++
Sbjct: 169 IEIVDSQNRPMFASGSSKLQPYAVTILTQIGAALNDV-DNRISIAGHTDAVPYTAGPEGY 227
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+N +S ERA+ + L+ G+ ++ + +RG A P+ N N+RI I +
Sbjct: 228 SNWELSSERANAARRALVAGGMHGDKLLQMRGLADVLPL--NSHVADEPTNRRISILVLN 285
Query: 185 RGNIK 189
+ +
Sbjct: 286 KAAEQ 290
>gi|152996653|ref|YP_001341488.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
gi|150837577|gb|ABR71553.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
Length = 301
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 9/174 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH-- 79
SR+K S ++ +N + K Q ++ I ++ +G IT
Sbjct: 106 SRDKFLGNGPDSAESKSINNMLREEMSKMNTLLSQQ-KNMRIEITPLGVRITLLDDPDKP 164
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI---GTLKNNLLISQERADV 136
+ + L +A I NK + I I HTDS G +N +S RA+
Sbjct: 165 MFERGSARMMPDIENTLLSMAPIFNKVTN-PIVITGHTDSSKFGGGRVDNWDLSALRANA 223
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ L + GV R V G + P + DT N+RI I + KK
Sbjct: 224 ARHILEEGGVEDKRIAQVIGLSDTIPYNRLDTDS--AENRRISITLLTDDAYKK 275
>gi|50120622|ref|YP_049789.1| flagellar motor protein [Pectobacterium atrosepticum SCRI1043]
gi|49611148|emb|CAG74594.1| chemotaxis protein [Pectobacterium atrosepticum SCRI1043]
Length = 351
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 60/193 (31%), Gaps = 25/193 (12%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVS 66
G G ++ ++ K L++ + ++ I +
Sbjct: 83 GGGNDPTQQDGEVRKAIKTDNVEKKLDEVRLNRLRERLDQLIEADPRLRALRPHLLIEMI 142
Query: 67 RIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
G I + +E +L+ IA I+N FP+ ++I HTD +
Sbjct: 143 EEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIAPIMNDFPN-KLSISGHTDDVQYTT 201
Query: 125 NNLLISQERADVIKSYLIQRGVSS-----NRFISVRGFAYKYPI---DTNDTKVGRQNNQ 176
S ++ +R + + + V G A + + + N+
Sbjct: 202 GERGYSNWELSADRANASRRELIWGGLSDGKVLRVVGMAATMSLKQAASGND----AINR 257
Query: 177 RIEIQIFPRGNIK 189
RI + + R K
Sbjct: 258 RISLLVLSRQAQK 270
>gi|323948225|gb|EGB44213.1| OmpA family protein [Escherichia coli H120]
Length = 308
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKEAEQ 271
>gi|260868487|ref|YP_003234889.1| MotB protein [Escherichia coli O111:H- str. 11128]
gi|257764843|dbj|BAI36338.1| MotB protein [Escherichia coli O111:H- str. 11128]
gi|323180688|gb|EFZ66233.1| chemotaxis protein motB [Escherichia coli 1180]
Length = 308
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|323968311|gb|EGB63718.1| OmpA family protein [Escherichia coli M863]
gi|327253019|gb|EGE64673.1| chemotaxis protein motB [Escherichia coli STEC_7v]
Length = 308
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 56/148 (37%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDGGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|320177401|gb|EFW52402.1| Flagellar motor rotation protein MotB [Shigella dysenteriae CDC
74-1112]
Length = 308
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|265763305|ref|ZP_06091873.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263255913|gb|EEZ27259.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301162933|emb|CBW22480.1| putative outer membrane protein [Bacteroides fragilis 638R]
Length = 399
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 59/142 (41%), Gaps = 3/142 (2%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIA 100
+D+ D ++ + I V + + C + ++ F + + + L IA
Sbjct: 244 PVVQYIDRPVDRIVERIVEKRIEVPAVVESHVCDLFDNIHFAFDKDVITSESEITLDKIA 303
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+L +P I +TD+ G+ N+ +S+ RA + S L++R V + + RG Y
Sbjct: 304 DLLKSYPDNNFLITGYTDARGSDNYNIDLSKRRAKAVYSALLKRQVPQH-MLKWRGVGYH 362
Query: 161 YPIDTNDTKVG-RQNNQRIEIQ 181
R ++++ I+
Sbjct: 363 ASSVPASGPDKVRMGDRKVSIE 384
>gi|53713209|ref|YP_099201.1| hypothetical protein BF1919 [Bacteroides fragilis YCH46]
gi|60681476|ref|YP_211620.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
gi|253566878|ref|ZP_04844330.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|52216074|dbj|BAD48667.1| hypothetical protein [Bacteroides fragilis YCH46]
gi|60492910|emb|CAH07686.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
gi|251944441|gb|EES84930.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length = 399
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 59/142 (41%), Gaps = 3/142 (2%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIA 100
+D+ D ++ + I V + + C + ++ F + + + L IA
Sbjct: 244 PVVQYIDRPVDRIVERIVEKRIEVPAVVESHVCDLFDNIHFAFDKDVITSESEITLDKIA 303
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+L +P I +TD+ G+ N+ +S+ RA + S L++R V + + RG Y
Sbjct: 304 DLLKSYPDNNFLITGYTDARGSDNYNIDLSKRRAKAVYSALLKRQVPQH-MLKWRGVGYH 362
Query: 161 YPIDTNDTKVG-RQNNQRIEIQ 181
R ++++ I+
Sbjct: 363 ASSVPASGPDKVRMGDRKVSIE 384
>gi|88858031|ref|ZP_01132673.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Pseudoalteromonas tunicata D2]
gi|88819648|gb|EAR29461.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Pseudoalteromonas tunicata D2]
Length = 299
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 1/105 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L K + + + +N++ + + HTD G N +S R +
Sbjct: 195 VYFEFDKDHLTKTAIATINEVKQAVNEWKPKTVVLSGHTDLAGQNIYNEGLSTRRVTNVL 254
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ LI I + ++P + N+R+EI +
Sbjct: 255 NGLILA-GVPENKIDISALGERHPAVRTPDGTKKAENRRVEIHLV 298
>gi|146337406|ref|YP_001202454.1| hypothetical protein BRADO0242 [Bradyrhizobium sp. ORS278]
gi|146190212|emb|CAL74204.1| hypothetical protein BRADO0242 [Bradyrhizobium sp. ORS278]
Length = 337
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + LQ+IA LN+ P V I+ HTD++G +NL +
Sbjct: 204 IDLNTITFDTGSWEIAPDQVAKLQVIADGLNQAIQRNPREVYLIEGHTDAVGNETDNLSL 263
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA+ + + L Q+ ++ +G+ +Y + + N+R+ + +I P
Sbjct: 264 SDRRAESVATLLTQQFGVPAENLTSQGYGEQYLKEQTQGPS--RINRRVTVRRITP 317
>gi|296103598|ref|YP_003613744.1| chemotaxis protein MotB [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295058057|gb|ADF62795.1| chemotaxis protein MotB [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 301
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 45 SSLDKAEDEFQMQLQ--------DTGIVVSRIGDMITCYI---PVHVSFVSEVFLEKKFL 93
SL +A+++ Q ++ + I+++ D + I F L + ++
Sbjct: 111 ESLKQAKEKLQKMIETDPRLNNFKSNILLNLTNDGLLIQITDSQDRPMFRVGSELPESYM 170
Query: 94 P-MLQLIATILNKFPSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVS 147
+LQ + +L + P+ +++ HTDS+ +N +S RA+ + L++ G++
Sbjct: 171 NGILQALVPLLQELPNA-LSLTGHTDSLPYAGGDGGYSNWELSAGRANAARRVLVRGGLN 229
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
RF+ V G A + P+ N + N+RI I + R ++
Sbjct: 230 DERFLRVIGTASRMPL-ENTSPDS-AVNRRISILVLSRSKEQE 270
>gi|294676839|ref|YP_003577454.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
1003]
gi|294475659|gb|ADE85047.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
Length = 334
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 66/197 (33%), Gaps = 38/197 (19%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT---GIVVSRIGDMITCYIPVHV 80
EK K + K +++ + + G+ VS GD + +
Sbjct: 108 EKLKQRDPLEAYSARSTKARHEMIERLASAVKEDIAREKIEGLDVSAQGDALRFQ-GSGL 166
Query: 81 SFVSEVFLEKKFLPMLQLIATILNK-----------------FPST----VIAIQSHTDS 119
+ L L +++L+ L P + ++ HTD+
Sbjct: 167 FASGQGGLSGNSLRIIRLLGAHLEGQLPCFTVGPRGAIAASCNPDLVLIETVQVEGHTDA 226
Query: 120 IGTLKNNLLISQERADVIKS-------------YLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ +NL +S RA + L + + ++V G+ PI N
Sbjct: 227 DASQASNLTLSMLRATSAFNAIAPDAAQDDAPPMLAFQNLLGQPVLAVAGYGEMRPIGPN 286
Query: 167 DTKVGRQNNQRIEIQIF 183
D+ G+ N+RI+++
Sbjct: 287 DSPEGKAANRRIDLRFI 303
>gi|23010955|ref|ZP_00051470.1| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum
MS-1]
Length = 464
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 47/176 (26%), Gaps = 24/176 (13%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG---IVVSRIGDMITCYIPV 78
++ + + D+ + V R G+ + I
Sbjct: 293 PSKEPAAAIPAEGAKSAETAALAALKDEIAKAVPSLPMGAPAPRVEVRRTGEGVLISITD 352
Query: 79 HVSFV----SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
++F K + L+ IA ILN P V+ G S+
Sbjct: 353 EINFSMFGIGSAEPTPKVVKALERIAKILNTRPGRVVV-------RGHTDARPFRSETYD 405
Query: 135 DVIKSYLIQRGVSSNRFISVRG-FAYK-------YPIDTNDTKVGRQNNQRIEIQI 182
+ S +R + + P D K N+RIEI +
Sbjct: 406 NWRLSRPGRRWPPTCWCAAASTRRGSSASKLCRPQPRIAADPKA--AENRRIEILL 459
>gi|258592514|emb|CBE68823.1| Outer membrane protein, OmpA/MotB family [NC10 bacterium 'Dutch
sediment']
Length = 308
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 70/183 (38%), Gaps = 27/183 (14%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ--------DTGIVVSRIGDMI 72
AS+ + + ++ L++A ++F+ +Q I + + +
Sbjct: 102 ASQTMSPEGSEDTQKSPEDKEQDRIHLEEAAEQFRQVIQRVPTLQALQGQIRIEITSEGL 161
Query: 73 TCYI----PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD------SIGT 122
+ + L+ +L IA + K P+ + ++ HTD + G
Sbjct: 162 RVQLIEGNRDSFFDLGSSRLKPVTRQLLAAIAHEVAKLPN-QVVVEGHTDARPYSGNTGR 220
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY---KYPIDTNDTKVGRQNNQRIE 179
+N +S +RA+ + + + G+ N+ V G+A P D DT N+RI
Sbjct: 221 DYSNWELSTDRANSARRTMEEVGLRRNQVSRVIGYADQHLFNPTDPLDTA-----NRRIS 275
Query: 180 IQI 182
I +
Sbjct: 276 ILV 278
>gi|197337147|ref|YP_002158389.1| OmpA family protein [Vibrio fischeri MJ11]
gi|197314399|gb|ACH63848.1| OmpA family protein [Vibrio fischeri MJ11]
Length = 1590
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 15/115 (13%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I V F + + I + L K P I I+ HT +GT + N+ +SQ+RA
Sbjct: 629 IEVVFEFDKKTADTSMVRQGIAEIVSFLEKQPDVHIVIEGHTCQVGTNQYNMNLSQQRAQ 688
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ---------NNQRIEIQ 181
+ ++ I+V F P+ GR+ N+R++I+
Sbjct: 689 NVADLFPKKL---QEKITVIAFGETQPLVE---ATGREVSSDNLKLKVNRRVKIK 737
>gi|197121340|ref|YP_002133291.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|220916043|ref|YP_002491347.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|196171189|gb|ACG72162.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|219953897|gb|ACL64281.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 170
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 11/175 (6%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
+ + I+ + + G + + +
Sbjct: 4 LALAAVIT--LALAAPAAAQVPWDAAKKAAGQATVGKLEKEINRRLLEEGRKNQCSFKTD 61
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D + + +S + L + + HTD+ G+ +N
Sbjct: 62 TDQLEPGCDQKMKRLSNALV--DAKKRLNG-----AGVKNFKFVVSGHTDTSGSAAHNQE 114
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQRIEIQI 182
+S RA VI+ L+ RG+ SV G K P+ +DT + N+R E+Q+
Sbjct: 115 LSARRAAVIEKELVARGIPQAEIESV-GMGSKKPLVKPDDTPAKKAKNRRYELQV 168
>gi|323977926|gb|EGB73012.1| OmpA family protein [Escherichia coli TW10509]
Length = 308
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 56/148 (37%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDGGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|316934820|ref|YP_004109802.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315602534|gb|ADU45069.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
Length = 273
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 61/175 (34%), Gaps = 19/175 (10%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMITCYI 76
K + + +N + A + LQ+ I+ + I
Sbjct: 90 TAKPSPGEVTRDEGINTKEDREFALASASLRQALQNMPEIAELSKNIMFEETKQGLNLEI 149
Query: 77 ---PVHVSFVSEVFLE-KKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNNLL 128
F + ++ +LQ +A L P I+I HT S + N
Sbjct: 150 MDQDGRSMFADGSRVPFERTRLLLQRLAVPLRATP-LRISIVGHTSSGLLPERSDYNGWD 208
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S +RA+ ++ L + G+ + +V G + P+ D + N+R+ I +
Sbjct: 209 LSSDRANSVRQILEREGLPGSHIFAVTGKSDSQPLFPEDPSI--AANRRVTITLM 261
>gi|33151318|ref|NP_872671.1| major outer membrane protein [Haemophilus ducreyi 35000HP]
gi|1872470|gb|AAB49273.1| major outer membrane protein [Haemophilus ducreyi]
gi|33147538|gb|AAP95060.1| major outer membrane protein [Haemophilus ducreyi 35000HP]
Length = 403
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+++ +L T + + I + +TD IG+ NL +SQ RA
Sbjct: 280 SDVLFDFAKADLKQEAAQVLDATNTEIVNLGLATPAIQVNGYTDRIGSGDVNLKLSQRRA 339
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +YL+ + + I+ G+ PI N GR ++R+E+QI
Sbjct: 340 ETVANYLVAK-GQNPVSINAVGYGEANPITGNTCDAVKGRKQLIACLAPDRRVEVQI 395
>gi|15802301|ref|NP_288326.1| flagellar motor protein MotB [Escherichia coli O157:H7 EDL933]
gi|15831853|ref|NP_310626.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. Sakai]
gi|16129841|ref|NP_416403.1| protein that enables flagellar motor rotation [Escherichia coli
str. K-12 substr. MG1655]
gi|89108729|ref|AP_002509.1| protein that enables flagellar motor rotation [Escherichia coli
str. K-12 substr. W3110]
gi|157158423|ref|YP_001463195.1| flagellar motor protein MotB [Escherichia coli E24377A]
gi|157161361|ref|YP_001458679.1| flagellar motor protein MotB [Escherichia coli HS]
gi|168757929|ref|ZP_02782936.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4401]
gi|168762313|ref|ZP_02787320.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4501]
gi|168770876|ref|ZP_02795883.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4486]
gi|168776560|ref|ZP_02801567.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4196]
gi|168783193|ref|ZP_02808200.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4076]
gi|168789758|ref|ZP_02814765.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC869]
gi|168801871|ref|ZP_02826878.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC508]
gi|170019766|ref|YP_001724720.1| flagellar motor protein MotB [Escherichia coli ATCC 8739]
gi|170081544|ref|YP_001730864.1| hypothetical protein ECDH10B_2030 [Escherichia coli str. K-12
substr. DH10B]
gi|170684155|ref|YP_001743353.1| flagellar motor protein MotB [Escherichia coli SMS-3-5]
gi|188492393|ref|ZP_02999663.1| chemotaxis protein MotB [Escherichia coli 53638]
gi|191168098|ref|ZP_03029897.1| chemotaxis protein MotB [Escherichia coli B7A]
gi|193065441|ref|ZP_03046510.1| chemotaxis protein MotB [Escherichia coli E22]
gi|193069870|ref|ZP_03050819.1| chemotaxis protein MotB [Escherichia coli E110019]
gi|194429327|ref|ZP_03061853.1| chemotaxis protein MotB [Escherichia coli B171]
gi|194439077|ref|ZP_03071160.1| chemotaxis protein MotB [Escherichia coli 101-1]
gi|195939593|ref|ZP_03084975.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. EC4024]
gi|208810604|ref|ZP_03252480.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4206]
gi|208816679|ref|ZP_03257799.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4045]
gi|208819881|ref|ZP_03260201.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4042]
gi|209397424|ref|YP_002270973.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4115]
gi|217329015|ref|ZP_03445096.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. TW14588]
gi|218695455|ref|YP_002403122.1| flagellar motor protein MotB [Escherichia coli 55989]
gi|218705389|ref|YP_002412908.1| flagellar motor protein MotB [Escherichia coli UMN026]
gi|238901104|ref|YP_002926900.1| protein that enables flagellar motor rotation [Escherichia coli
BW2952]
gi|253773154|ref|YP_003035985.1| flagellar motor protein MotB [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254161949|ref|YP_003045057.1| flagellar motor protein MotB [Escherichia coli B str. REL606]
gi|254793513|ref|YP_003078350.1| flagellar motor protein MotB [Escherichia coli O157:H7 str.
TW14359]
gi|256017907|ref|ZP_05431772.1| flagellar motor protein MotB [Shigella sp. D9]
gi|260844299|ref|YP_003222077.1| MotB protein [Escherichia coli O103:H2 str. 12009]
gi|260855829|ref|YP_003229720.1| MotB protein [Escherichia coli O26:H11 str. 11368]
gi|261227610|ref|ZP_05941891.1| protein that enables flagellar motor rotation [Escherichia coli
O157:H7 str. FRIK2000]
gi|261258224|ref|ZP_05950757.1| MotB protein [Escherichia coli O157:H7 str. FRIK966]
gi|291283071|ref|YP_003499889.1| Chemotaxis protein motB [Escherichia coli O55:H7 str. CB9615]
gi|293405381|ref|ZP_06649373.1| motB [Escherichia coli FVEC1412]
gi|293446276|ref|ZP_06662698.1| chemotaxis protein MotB [Escherichia coli B088]
gi|297517349|ref|ZP_06935735.1| flagellar motor protein MotB [Escherichia coli OP50]
gi|298381025|ref|ZP_06990624.1| chemotaxis protein motB [Escherichia coli FVEC1302]
gi|300819874|ref|ZP_07100059.1| chemotaxis protein MotB [Escherichia coli MS 107-1]
gi|300822336|ref|ZP_07102477.1| chemotaxis protein MotB [Escherichia coli MS 119-7]
gi|300899142|ref|ZP_07117423.1| chemotaxis protein MotB [Escherichia coli MS 198-1]
gi|300924982|ref|ZP_07140907.1| chemotaxis protein MotB [Escherichia coli MS 182-1]
gi|300928923|ref|ZP_07144427.1| chemotaxis protein MotB [Escherichia coli MS 187-1]
gi|300956597|ref|ZP_07168876.1| chemotaxis protein MotB [Escherichia coli MS 175-1]
gi|301029341|ref|ZP_07192438.1| chemotaxis protein MotB [Escherichia coli MS 196-1]
gi|301327680|ref|ZP_07220887.1| chemotaxis protein MotB [Escherichia coli MS 78-1]
gi|301645593|ref|ZP_07245522.1| chemotaxis protein MotB [Escherichia coli MS 146-1]
gi|307138554|ref|ZP_07497910.1| flagellar motor protein MotB [Escherichia coli H736]
gi|307314199|ref|ZP_07593809.1| OmpA/MotB domain protein [Escherichia coli W]
gi|309796000|ref|ZP_07690413.1| chemotaxis protein MotB [Escherichia coli MS 145-7]
gi|312969933|ref|ZP_07784116.1| chemotaxis protein motB [Escherichia coli 1827-70]
gi|331642507|ref|ZP_08343642.1| chemotaxis protein MotB [Escherichia coli H736]
gi|331653299|ref|ZP_08354304.1| chemotaxis protein MotB [Escherichia coli M718]
gi|331668586|ref|ZP_08369434.1| chemotaxis protein MotB [Escherichia coli TA271]
gi|331677774|ref|ZP_08378449.1| chemotaxis protein MotB [Escherichia coli H591]
gi|332278938|ref|ZP_08391351.1| flagellar motor rotation protein [Shigella sp. D9]
gi|84028148|sp|P0AF07|MOTB_ECO57 RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
MotB
gi|84028149|sp|P0AF06|MOTB_ECOLI RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
MotB
gi|12515953|gb|AAG56879.1|AE005411_3 enables flagellar motor rotation, linking torque machinery to cell
wall [Escherichia coli O157:H7 str. EDL933]
gi|146883|gb|AAA24178.1| chemotaxis protein MotB [Escherichia coli]
gi|1736548|dbj|BAA15710.1| protein that enables flagellar motor rotation [Escherichia coli
str. K12 substr. W3110]
gi|1788198|gb|AAC74959.1| protein that enables flagellar motor rotation [Escherichia coli
str. K-12 substr. MG1655]
gi|13362067|dbj|BAB36022.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. Sakai]
gi|157067041|gb|ABV06296.1| chemotaxis protein MotB [Escherichia coli HS]
gi|157080453|gb|ABV20161.1| chemotaxis protein MotB [Escherichia coli E24377A]
gi|169754694|gb|ACA77393.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739]
gi|169889379|gb|ACB03086.1| MotB [Escherichia coli str. K-12 substr. DH10B]
gi|170521873|gb|ACB20051.1| chemotaxis protein MotB [Escherichia coli SMS-3-5]
gi|187768100|gb|EDU31944.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4196]
gi|188487592|gb|EDU62695.1| chemotaxis protein MotB [Escherichia coli 53638]
gi|188999462|gb|EDU68448.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4076]
gi|189355159|gb|EDU73578.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4401]
gi|189360307|gb|EDU78726.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4486]
gi|189367322|gb|EDU85738.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4501]
gi|189370705|gb|EDU89121.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC869]
gi|189376024|gb|EDU94440.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC508]
gi|190901896|gb|EDV61646.1| chemotaxis protein MotB [Escherichia coli B7A]
gi|192926846|gb|EDV81471.1| chemotaxis protein MotB [Escherichia coli E22]
gi|192956770|gb|EDV87224.1| chemotaxis protein MotB [Escherichia coli E110019]
gi|194412634|gb|EDX28930.1| chemotaxis protein MotB [Escherichia coli B171]
gi|194422036|gb|EDX38040.1| chemotaxis protein MotB [Escherichia coli 101-1]
gi|208725120|gb|EDZ74827.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4206]
gi|208731022|gb|EDZ79711.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4045]
gi|208740004|gb|EDZ87686.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4042]
gi|209158824|gb|ACI36257.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4115]
gi|209767220|gb|ACI81922.1| chemotaxis protein MotB [Escherichia coli]
gi|209767222|gb|ACI81923.1| chemotaxis protein MotB [Escherichia coli]
gi|209767224|gb|ACI81924.1| chemotaxis protein MotB [Escherichia coli]
gi|209767226|gb|ACI81925.1| chemotaxis protein MotB [Escherichia coli]
gi|217318362|gb|EEC26789.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. TW14588]
gi|218352187|emb|CAU97928.1| protein that enables flagellar motor rotation [Escherichia coli
55989]
gi|218432486|emb|CAR13379.1| protein that enables flagellar motor rotation [Escherichia coli
UMN026]
gi|238863319|gb|ACR65317.1| protein that enables flagellar motor rotation [Escherichia coli
BW2952]
gi|242377610|emb|CAQ32366.1| MotB protein, enables flagellar motor rotation, linking torque
machinery to cell wall, subunit of Flagellar Motor
Complex and Flagellum [Escherichia coli BL21(DE3)]
gi|253324198|gb|ACT28800.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253973850|gb|ACT39521.1| flagellar motor protein MotB [Escherichia coli B str. REL606]
gi|253978044|gb|ACT43714.1| flagellar motor protein MotB [Escherichia coli BL21(DE3)]
gi|254592913|gb|ACT72274.1| protein that enables flagellar motor rotation [Escherichia coli
O157:H7 str. TW14359]
gi|257754478|dbj|BAI25980.1| MotB protein [Escherichia coli O26:H11 str. 11368]
gi|257759446|dbj|BAI30943.1| MotB protein [Escherichia coli O103:H2 str. 12009]
gi|260448988|gb|ACX39410.1| OmpA/MotB domain protein [Escherichia coli DH1]
gi|290762944|gb|ADD56905.1| Chemotaxis protein motB [Escherichia coli O55:H7 str. CB9615]
gi|291323106|gb|EFE62534.1| chemotaxis protein MotB [Escherichia coli B088]
gi|291427589|gb|EFF00616.1| motB [Escherichia coli FVEC1412]
gi|298278467|gb|EFI19981.1| chemotaxis protein motB [Escherichia coli FVEC1302]
gi|299877767|gb|EFI85978.1| chemotaxis protein MotB [Escherichia coli MS 196-1]
gi|300316579|gb|EFJ66363.1| chemotaxis protein MotB [Escherichia coli MS 175-1]
gi|300357232|gb|EFJ73102.1| chemotaxis protein MotB [Escherichia coli MS 198-1]
gi|300418857|gb|EFK02168.1| chemotaxis protein MotB [Escherichia coli MS 182-1]
gi|300463077|gb|EFK26570.1| chemotaxis protein MotB [Escherichia coli MS 187-1]
gi|300525219|gb|EFK46288.1| chemotaxis protein MotB [Escherichia coli MS 119-7]
gi|300527571|gb|EFK48633.1| chemotaxis protein MotB [Escherichia coli MS 107-1]
gi|300845775|gb|EFK73535.1| chemotaxis protein MotB [Escherichia coli MS 78-1]
gi|301076125|gb|EFK90931.1| chemotaxis protein MotB [Escherichia coli MS 146-1]
gi|306906168|gb|EFN36686.1| OmpA/MotB domain protein [Escherichia coli W]
gi|308120450|gb|EFO57712.1| chemotaxis protein MotB [Escherichia coli MS 145-7]
gi|309702112|emb|CBJ01427.1| chemotaxis protein MotB (motility protein B) [Escherichia coli ETEC
H10407]
gi|310338218|gb|EFQ03307.1| chemotaxis protein motB [Escherichia coli 1827-70]
gi|315061195|gb|ADT75522.1| protein that enables flagellar motor rotation [Escherichia coli W]
gi|315136532|dbj|BAJ43691.1| chemotaxis protein motB [Escherichia coli DH1]
gi|320188589|gb|EFW63251.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
str. EC1212]
gi|320198585|gb|EFW73185.1| Flagellar motor rotation protein MotB [Escherichia coli EC4100B]
gi|320641743|gb|EFX11131.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. G5101]
gi|320657987|gb|EFX25749.1| flagellar motor protein MotB [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320658560|gb|EFX26254.1| flagellar motor protein MotB [Escherichia coli O55:H7 str. USDA
5905]
gi|320668458|gb|EFX35285.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. LSU-61]
gi|323152620|gb|EFZ38896.1| chemotaxis protein motB [Escherichia coli EPECa14]
gi|323174594|gb|EFZ60215.1| chemotaxis protein motB [Escherichia coli LT-68]
gi|323186334|gb|EFZ71684.1| chemotaxis protein motB [Escherichia coli 1357]
gi|323378228|gb|ADX50496.1| OmpA/MotB domain protein [Escherichia coli KO11]
gi|323937148|gb|EGB33428.1| OmpA family protein [Escherichia coli E1520]
gi|323940442|gb|EGB36633.1| OmpA family protein [Escherichia coli E482]
gi|323961944|gb|EGB57543.1| OmpA family protein [Escherichia coli H489]
gi|323972601|gb|EGB67804.1| OmpA family protein [Escherichia coli TA007]
gi|324118949|gb|EGC12838.1| OmpA family protein [Escherichia coli E1167]
gi|326342267|gb|EGD66048.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
str. 1044]
gi|326343818|gb|EGD67580.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
str. 1125]
gi|331039305|gb|EGI11525.1| chemotaxis protein MotB [Escherichia coli H736]
gi|331049397|gb|EGI21469.1| chemotaxis protein MotB [Escherichia coli M718]
gi|331063780|gb|EGI35691.1| chemotaxis protein MotB [Escherichia coli TA271]
gi|331074234|gb|EGI45554.1| chemotaxis protein MotB [Escherichia coli H591]
gi|332089624|gb|EGI94726.1| chemotaxis protein motB [Shigella boydii 5216-82]
gi|332101290|gb|EGJ04636.1| flagellar motor rotation protein [Shigella sp. D9]
gi|332343616|gb|AEE56950.1| chemotaxis protein MotB [Escherichia coli UMNK88]
Length = 308
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|313205988|ref|YP_004045165.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868]
gi|312445304|gb|ADQ81659.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868]
gi|315022301|gb|EFT35329.1| OmpA/MotB [Riemerella anatipestifer RA-YM]
gi|325336572|gb|ADZ12846.1| OmpA4 [Riemerella anatipestifer RA-GD]
Length = 215
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 71/208 (34%), Gaps = 34/208 (16%)
Query: 2 IKELGLSMFIMTTISGCGLAS----------REKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
+K+ ++ ++ + C E + + + G +
Sbjct: 1 MKKYIFAVAAISFMVSCKKIQPGGNKNILKLEEGVERYTDDAQGNGHSAHAEGHHASGVK 60
Query: 52 DEFQMQLQD---TGIVVSRIGDMITCYIPVHVSFVSEVFLE------------------- 89
+E + L+ G M++ + S+ L+
Sbjct: 61 EEVTIDLEGVTLKGYKGGMEDTMLSFLKSGKYASSSDDVLKNVWYDFDHVNFKMGSTNQL 120
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ + +A IL +P I I +TD G+ + N+ ISQ RA+ IK+ +++
Sbjct: 121 ESGAEQIDNLAKILKAYPDAKIKIGGYTDKTGSEETNVKISQARAEFIKAQ-LEKAGVGA 179
Query: 150 RFISVRGFA-YKYPIDTNDTKVGRQNNQ 176
+ +S G+ + + + R +++
Sbjct: 180 QVVSAEGYGSKFAKVAADASDEERASDR 207
>gi|254490462|ref|ZP_05103648.1| hypothetical protein MDMS009_794 [Methylophaga thiooxidans DMS010]
gi|224464206|gb|EEF80469.1| hypothetical protein MDMS009_794 [Methylophaga thiooxydans DMS010]
Length = 212
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 60/205 (29%), Gaps = 25/205 (12%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ +F+ I S E+ K+ + D EF +L V
Sbjct: 4 LMMVFLFIAIVYMRDISLERDKIKDVAVAYQQNQVAIY----DALNSEFSHELVSWKASV 59
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI----LNKFPST--VIAIQSHTDS 119
+ P + + L+ +F +L L KF + + I+ HT S
Sbjct: 60 DKETLSFQFNSPEVLFDSGDSNLKSEFEEILITFIPRYLSVLEKFKDSIDEVRIEGHTSS 119
Query: 120 IGTLKNNLLI--------SQERADVIKSYLIQRGV-------SSNRFISVRGFAYKYPID 164
SQ R + ++ Q + S G A
Sbjct: 120 EWGNDTPPDAAYFLNMALSQNRTRSVLNFAYQDTGLSKNEQNWVKKTFSAVGLASAKAKL 179
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNIK 189
D ++ ++R+ ++ +I+
Sbjct: 180 NIDGSENKELSRRVSFRVITNADIQ 204
>gi|251733447|emb|CAR82473.1| pal [Bradyrhizobium japonicum]
Length = 87
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L + + L+ A L + I+ H D GT + N+ + RA ++S+L
Sbjct: 2 DQTDLTPQAIVTLEKQAQWLQNYRQYSFTIEGHADERGTREYNIALGARRAQSVRSFLAS 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
RG+ NR ++ + + P+ +
Sbjct: 62 RGIDPNRMRTIS-YGKERPVAVCND 85
>gi|90022258|ref|YP_528085.1| OmpA family protein [Saccharophagus degradans 2-40]
gi|89951858|gb|ABD81873.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 482
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 7/132 (5%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILN--KFPSTV 110
Q +L ++ + V+ F L+ K + I + +
Sbjct: 323 LQSELYADAPQTYKVLTENAMRLSVNFRFKDGSAELDNKAKQDILRIVRYMQMPENADKR 382
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I + DS T + ++S+ RA +KS L G+SS SV G P+ +N
Sbjct: 383 IQLVGFGDSKETAARSTVLSKLRAVAVKSALYSYGISSE---SVLGLGSDLPVASNAG-S 438
Query: 171 GRQNNQRIEIQI 182
R NQR+E+ +
Sbjct: 439 ARLKNQRVEVWV 450
>gi|209919315|ref|YP_002293399.1| flagellar motor protein MotB [Escherichia coli SE11]
gi|218554477|ref|YP_002387390.1| flagellar motor protein MotB [Escherichia coli IAI1]
gi|209912574|dbj|BAG77648.1| chemotaxis protein MotB [Escherichia coli SE11]
gi|218361245|emb|CAQ98829.1| protein that enables flagellar motor rotation [Escherichia coli
IAI1]
gi|324017971|gb|EGB87190.1| chemotaxis protein MotB [Escherichia coli MS 117-3]
Length = 308
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|320178162|gb|EFW53139.1| Flagellar motor rotation protein MotB [Shigella boydii ATCC 9905]
Length = 308
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|315617885|gb|EFU98483.1| chemotaxis protein motB [Escherichia coli 3431]
Length = 265
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 84 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 143
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 144 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 202
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 203 RLSDRGPDD--AVNRRISLLVLNKQAEQ 228
>gi|255655882|ref|ZP_05401291.1| hypothetical protein CdifQCD-2_09334 [Clostridium difficile
QCD-23m63]
gi|296450696|ref|ZP_06892449.1| conserved hypothetical protein [Clostridium difficile NAP08]
gi|296879187|ref|ZP_06903182.1| conserved hypothetical protein [Clostridium difficile NAP07]
gi|296260540|gb|EFH07382.1| conserved hypothetical protein [Clostridium difficile NAP08]
gi|296429730|gb|EFH15582.1| conserved hypothetical protein [Clostridium difficile NAP07]
Length = 210
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 54/162 (33%), Gaps = 15/162 (9%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH-VSFVSEVFLEKKFL 93
I + + +GI V + + L+ +
Sbjct: 40 SESISGSVEQDLAKNVNTSVEETFKKSGIPVKVDKSNGQVTFGERTMFDIDSDVLKPEAK 99
Query: 94 PMLQLIA-TIL----NKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI---- 142
ML++ + + I I+ HTD +G+ NL +SQ RA + +++
Sbjct: 100 EMLKMFVPKYMETIYKDYGDYISKIVIEGHTDDVGSYIYNLDLSQRRAYSVAKFIVGDEI 159
Query: 143 ---QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + I G + I D V R ++R+E++
Sbjct: 160 GDYKYKDKVTKHIIAIGRSKAELIKNGDNSVNRDASRRVELK 201
>gi|293415204|ref|ZP_06657847.1| chemotaxis protein MotB [Escherichia coli B185]
gi|291432852|gb|EFF05831.1| chemotaxis protein MotB [Escherichia coli B185]
Length = 308
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|288918113|ref|ZP_06412470.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
gi|288350495|gb|EFC84715.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
Length = 186
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 41/117 (35%), Gaps = 6/117 (5%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
G ++ ++ L + L I + + + + ++D +G+ ++
Sbjct: 75 QADGSRVSTVSADYLFDADSDVLRPEAATALAGIVPQIREH-DGKVQVVGYSDGLGSTEH 133
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NL +S+ERA + + + V N R +R+EI +
Sbjct: 134 NLELSRERAVAV-QTYLTSQDIPAAMLEVVAKGEA-GAADNVADASR---RRVEIVL 185
>gi|92114147|ref|YP_574075.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
gi|91797237|gb|ABE59376.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
Length = 330
Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 10/139 (7%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ G I + + L +LQ +A LN P+ I
Sbjct: 130 LRQMSSQLRTDFIPEGLRIQLVDTDKRPMFELGSARLAPYMRDLLQALAPELNDVPNA-I 188
Query: 112 AIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
++ HTD + +N +S +RA+ + L+ G+ S++ + V G + ++
Sbjct: 189 SLTGHTDDLRYAGGEKGYSNWELSADRANASRRALVAAGLDSSKLLRVSGMGAR--VNLE 246
Query: 167 DTKVGRQNNQRIEIQIFPR 185
T+ N+RI I +
Sbjct: 247 GTQPSDAVNRRISIVVLSE 265
>gi|282881743|ref|ZP_06290406.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
gi|281304502|gb|EFA96599.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
Length = 382
Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 46/118 (38%), Gaps = 1/118 (0%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ D+ + Q L D + + + P + + +++ +P ++LIA +
Sbjct: 244 TDKDRQISDLQKALDDCNKRKAYVKPATATNLQPTVLFRQGQSVVDRSQMPNIELIANYM 303
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
S + I+ + G + N +S+ RA +K+ L+ + + + G
Sbjct: 304 KNHKSATVTIKGYASPEGPTELNQRLSENRAKNVKNLLVDKYRIAPNRLKTVGMGETN 361
>gi|27375632|ref|NP_767161.1| hypothetical protein blr0521 [Bradyrhizobium japonicum USDA 110]
gi|27348769|dbj|BAC45786.1| blr0521 [Bradyrhizobium japonicum USDA 110]
Length = 745
Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + LQ+IA LN+ P V I+ HTD++G +NL +
Sbjct: 612 IDVNTITFETGSWTIPPDQAAKLQVIADGLNRAIQANPRVVFLIEGHTDAVGNEVDNLSL 671
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ-IFP 184
S RA L Q+ ++ +G+ +Y + N+R+ ++ I P
Sbjct: 672 SDRRAQSAAELLTQQFGVPAENLTSQGYGEQYLKEQTQGPS--AINRRVTVRNITP 725
>gi|107027335|ref|YP_624846.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|105896709|gb|ABF79873.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
Length = 119
Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 6/114 (5%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIG----TLKNNLL 128
+V +E + M+ I + P + + +TD++ + NN
Sbjct: 5 LQTTDAPYASGDVTVEPWWASMMATIGRTIAASVPGAYVQVVGYTDNVPAGAISRGNNQA 64
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S+ RA + + IS G P+ N T GR N+R+E+ +
Sbjct: 65 LSEARAREVARIFAAA-GVPMQNISATGQGDADPLADNGTAPGRSRNRRVEVTV 117
>gi|328469346|gb|EGF40292.1| chemotaxis LafU protein [Vibrio parahaemolyticus 10329]
Length = 330
Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 68/172 (39%), Gaps = 11/172 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP- 77
G + + + DT +++ + Q + + V+ G I
Sbjct: 108 GDGDGPEINSLVPGTFDTQEQLAALAKVIEEMTAQINAQ-GNVNVTVTPQGLRIVLQDDY 166
Query: 78 -VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQ 131
H+ L F +L +A + + + +I I HTD+I ++N +S
Sbjct: 167 KQHMFSRGGAELTPFFEDLLLALAPLFERVTNPLI-ISGHTDAIPFKKRFGRQSNWALSA 225
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RADV + L++ G+ +R + V G + + + N + N+RIE+ I
Sbjct: 226 SRADVARKTLVEGGMPDDRVMQVTGMSDRALL--NPDEPDSSENRRIELFIL 275
>gi|167765326|ref|ZP_02437439.1| hypothetical protein BACSTE_03714 [Bacteroides stercoris ATCC
43183]
gi|167696954|gb|EDS13533.1| hypothetical protein BACSTE_03714 [Bacteroides stercoris ATCC
43183]
Length = 391
Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 50/136 (36%), Gaps = 9/136 (6%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
++K + + DT V + + + + L L +A +L
Sbjct: 248 EVEKIVERIVEKQADTAGSVEAMACDL---LDNIYFEFDKDVLTAASEKTLDRLAGLLKS 304
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY---P 162
+P I +TD+ G+ N +S RA + L++R + G + P
Sbjct: 305 YPDARFLITGYTDARGSSAYNTDLSNRRAKRVYEALLER-GVPAAMLKWHGIGKRASIIP 363
Query: 163 IDTNDTKVGRQNNQRI 178
+ ++ R+ ++++
Sbjct: 364 VAAGNSV--REGDRKV 377
>gi|330989073|gb|EGH87176.1| OmpA/MotB [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 831
Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 25/179 (13%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI------------TCY 75
+ +D ++ D+ + ++ + ++S + I T
Sbjct: 650 QAAGEVDDYQFAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLRAIETIT 709
Query: 76 IPVHVSF-VSEVFLEK---KFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLIS 130
+ F + L IA L P+ I I H D IG ++NL +S
Sbjct: 710 LESDTLFAFGRADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQIGDAQSNLQVS 769
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
++RA IK+YL+ + + + G P+ D ++ R N+R+EI++
Sbjct: 770 KQRAQTIKTYLVGK-GLPSELVDAVGEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEV 827
>gi|289647908|ref|ZP_06479251.1| OmpA/MotB [Pseudomonas syringae pv. aesculi str. 2250]
Length = 656
Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 25/179 (13%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI------------TCY 75
+ +D ++ D+ + ++ + ++S + I T
Sbjct: 475 QAAGEVDDYQFAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLRAIETIT 534
Query: 76 IPVHVSF-VSEVFLEK---KFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLIS 130
+ F + L IA L P+ I I H D IG ++NL +S
Sbjct: 535 LESDTLFAFGRADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQIGDAQSNLQVS 594
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
++RA IK+YL+ + + + G P+ D ++ R N+R+EI++
Sbjct: 595 KQRAQTIKTYLVGK-GLPSELVDAVGEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEV 652
>gi|289625247|ref|ZP_06458201.1| OmpA/MotB [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|330870468|gb|EGH05177.1| OmpA/MotB [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 647
Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 25/179 (13%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI------------TCY 75
+ +D ++ D+ + ++ + ++S + I T
Sbjct: 466 QAAGEVDDYQFAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLRAIETIT 525
Query: 76 IPVHVSF-VSEVFLEK---KFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLIS 130
+ F + L IA L P+ I I H D IG ++NL +S
Sbjct: 526 LESDTLFAFGRADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQIGDAQSNLQVS 585
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQI 182
++RA IK+YL+ + + + G P+ D ++ R N+R+EI++
Sbjct: 586 KQRAQTIKTYLVGK-GLPSELVDAVGEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEV 643
>gi|323158625|gb|EFZ44639.1| chemotaxis protein motB [Escherichia coli E128010]
Length = 275
Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 94 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 153
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 154 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 212
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 213 RLSDRGPDD--AVNRRISLLVLNKQAEQ 238
>gi|323165315|gb|EFZ51103.1| chemotaxis protein motB [Shigella sonnei 53G]
Length = 275
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 94 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 153
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 154 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 212
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 213 RLSDRGPDD--AVNRRISLLVLNKQAEQ 238
>gi|310823157|ref|YP_003955515.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|309396229|gb|ADO73688.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
Length = 171
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 20/184 (10%)
Query: 2 IKELGLSMFIMTT--ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K L +++ ++ ++ + KK S T K + +
Sbjct: 3 LKALCMAVSLLAVPGMALAQSPVEQFKKAAGKASKST---------LEKKINTKLTEDAR 53
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
D++ + ++ + + L A + + + HTDS
Sbjct: 54 KNQCSFKTGTDVLEAGCDQKLKNLTAALV--EAKKQLD--AGGVKNY---QFEVSGHTDS 106
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQRI 178
G N +S++RA VI L+ RG+ ++V G + P+ +DT + N+R
Sbjct: 107 SGDAAKNKALSEKRAAVIVKELVSRGIPRAEILAV-GRGSEQPLVKPDDTAAKKAKNRRY 165
Query: 179 EIQI 182
EIQ+
Sbjct: 166 EIQV 169
>gi|239908607|ref|YP_002955349.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
gi|239798474|dbj|BAH77463.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
Length = 346
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 59/171 (34%), Gaps = 11/171 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--TGIVVSRIGDMITCYIP 77
E + ++ + + + E + + + + V++ D + I
Sbjct: 129 KTKAEADALAKAQAKAEAAAAAQAQALEQQIEQALEKAVPELAGQVSVTQDKDKVRVEIM 188
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT--DSIGTLKNNLLISQ 131
+ + V L +L + ++ K +AI+ HT +N +S
Sbjct: 189 DKAERPLYDLGGVALLPDAQRILAAVTDVIRK-EGVKVAIEGHTDAYRYSGAYSNWDLSA 247
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA + +++ G++ + V G++ P N+RI + +
Sbjct: 248 GRALAARRFMVGAGLNPDAVAEVTGYSDTRPYVPGKPYD--PKNRRISLLL 296
>gi|149918137|ref|ZP_01906630.1| OmpA family protein [Plesiocystis pacifica SIR-1]
gi|149821142|gb|EDM80548.1| OmpA family protein [Plesiocystis pacifica SIR-1]
Length = 158
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 58/158 (36%), Gaps = 8/158 (5%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQ--LQDTGIVVSRIGDMITCYIPVHVSFVSEVFL 88
D ++ ++ + + + + ++ + D + L
Sbjct: 5 SAPIDGELEPGELSATRPRQPSAGEPESLVTGNLVIADNVVDACLLPKDEALFAYDSAKL 64
Query: 89 EKKFLPMLQLIATILNKFPSTV--IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+K L L+A + P + + HTD G+ + NL + ERA ++ YL+
Sbjct: 65 SEKAERTLALLARCFDTGPMRYQDLLVTGHTDPRGSDEYNLDLGLERAVAVRDYLVDE-G 123
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I R + +ND +++++EIQ+
Sbjct: 124 VEDFRIEARSVGERR--ASND-PEDWDDDRKVEIQLAS 158
>gi|218261435|ref|ZP_03476250.1| hypothetical protein PRABACTJOHN_01916 [Parabacteroides johnsonii
DSM 18315]
gi|218224010|gb|EEC96660.1| hypothetical protein PRABACTJOHN_01916 [Parabacteroides johnsonii
DSM 18315]
Length = 52
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
I G P+D N+T GR N+R EI + P+
Sbjct: 2 YGVKPLQIQPCGRGEFMPVDDNETADGRAKNRRTEIIMAPK 42
>gi|170693033|ref|ZP_02884194.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170142031|gb|EDT10198.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 259
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 11/115 (9%)
Query: 78 VHVSFVSEVFLE---KKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQER 133
+ + L + L + K T I + HTD IG+ ++N +SQ R
Sbjct: 142 EALFPFGKSSLNSMLPRGRAELDAAIEKIRKEDGVTRIDVVGHTDRIGSDESNRALSQAR 201
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPID---TNDTK---VGRQNNQRIEIQI 182
A+ +K+YL+ G+ + R I G P+ +T Q ++R+ I I
Sbjct: 202 AETVKAYLVAHGLDAER-IRASGAGSSQPVSHCPPGETPAVIACLQKDRRVTIAI 255
>gi|319942535|ref|ZP_08016845.1| outer membrane protein A [Sutterella wadsworthensis 3_1_45B]
gi|319803938|gb|EFW00856.1| outer membrane protein A [Sutterella wadsworthensis 3_1_45B]
Length = 222
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 55/164 (33%), Gaps = 18/164 (10%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ I D + + ++ + + +T + + L+ +
Sbjct: 56 AEAMGIDGAGCACDADILDKKACTAVEAPAPQ-QKSAEKVTFSA-DTLFNFDKATLKDEG 113
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+L + + + VI + D IG+ NL +SQ RAD + + + I
Sbjct: 114 RAVLDDLVSRVAGVDLEVILTTGYADRIGSDAYNLKLSQRRADAV-KAYLVQKGVDAALI 172
Query: 153 SVRGFAYKYPID--TNDTKVGR-----------QNNQR--IEIQ 181
G P+ N +K G+ Q N+R +E+
Sbjct: 173 KSEGKGEADPVVNCPNPSKAGQVKTFKELVQCLQPNRRAVVEVV 216
>gi|70734060|ref|YP_257700.1| flagellar motor protein MotB [Pseudomonas fluorescens Pf-5]
gi|68348359|gb|AAY95965.1| motility protein, MotB family [Pseudomonas fluorescens Pf-5]
Length = 372
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 11/173 (6%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH- 79
+ + + + + + +K E+ Q+Q I+ D + I
Sbjct: 103 TVDADQVEGMAEQVERERLELLLQELQNKVEENPQLQKFKDQILFEITPDGLRIQIMDAE 162
Query: 80 ---VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQE 132
+ L+ F +L +A + P+ I+I HTD+ N +S
Sbjct: 163 NRPMFDSGSARLKPYFEDILLAMADTIKTVPN-KISISGHTDAKPYSGTGDFGNWELSAN 221
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA+ + L+ G + V GFA + N+RI+I + +
Sbjct: 222 RANAARRALVAGGYPDPQVARVVGFASSA-LFDRKDPFN-PVNRRIDIVVLTK 272
>gi|257486672|ref|ZP_05640713.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 160
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G + N ISQERA + + +S RG P ND+ GR N+R+EI
Sbjct: 4 GPTEANQKISQERAQSVAAIFRL-SGLERNRLSQRGMGAVMPRAANDSLQGRALNRRVEI 62
Query: 181 QIFPRGNIK 189
+ P+ ++
Sbjct: 63 LMTPQDTMR 71
>gi|303231313|ref|ZP_07318049.1| OmpA family protein [Veillonella atypica ACS-049-V-Sch6]
gi|302514043|gb|EFL56049.1| OmpA family protein [Veillonella atypica ACS-049-V-Sch6]
Length = 339
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+ + + + + D+ + N+ +S+ R + YL+ GV +NR I + P+ T
Sbjct: 262 YKNDQVKLLGNADTDANPQYNIGLSERRVQDVAQYLVNNGVDANRLIGIA-NGDAKPVAT 320
Query: 166 NDTKVGRQNNQRIEIQI 182
N T G+ N+R+++ I
Sbjct: 321 NATANGKAENRRVDVFI 337
>gi|239908713|ref|YP_002955455.1| hypothetical protein DMR_40780 [Desulfovibrio magneticus RS-1]
gi|239798580|dbj|BAH77569.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 1002
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 36/102 (35%), Gaps = 8/102 (7%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI-------SQERADVIKS 139
+ + A L + + +TD+ + L SQ RA +
Sbjct: 900 SVPPDAAGQIAEAAQRLKAAGVGSVLVIGYTDNSRLRRALLRQYGTNAVLSQARAASVAE 959
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + + GF P+ NDT R+ N+R+EI
Sbjct: 960 -GLVKNGIDAGKVQIHGFGSAMPVSPNDTPFNREKNRRVEII 1000
>gi|86750474|ref|YP_486970.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86573502|gb|ABD08059.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 273
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 9/138 (6%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E ++ ++ G + + ++ +LQ +A L P
Sbjct: 127 PEISELSKNVMFEETKQGLNLEIMDQDGRAMFADGSKAPFERTRRLLQSLAGPLRATP-L 185
Query: 110 VIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
I I HT + N +S +RA+ ++ L + GV ++ F +V G + P+
Sbjct: 186 RITIAGHTSAGLMPARSDYNGFDLSADRANAVRQILEREGVPTSHFFAVTGRSDTQPLFP 245
Query: 166 NDTKVGRQNNQRIEIQIF 183
D + N+R+ I +
Sbjct: 246 EDPAI--AANRRVTITLM 261
>gi|58422903|gb|AAW73251.1| OmpA [Serratia sp. MF 416]
Length = 225
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + T L+ + + TD++G+ + NL +S++RA
Sbjct: 116 SDVLFAFNKATLKPEGQHALDQLYTQLSSLDPKDGSVVVLGFTDAVGSAEYNLRLSEQRA 175
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT---KVGRQ 173
+ YLI + + IS RG PI T DT + GR
Sbjct: 176 QSVVDYLISK-GIPSDKISARGMGKANPI-TGDTCGYRSGRA 215
>gi|331673414|ref|ZP_08374182.1| chemotaxis protein MotB [Escherichia coli TA280]
gi|331069612|gb|EGI40999.1| chemotaxis protein MotB [Escherichia coli TA280]
Length = 308
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 10/144 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
+ N+RI + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNK 267
>gi|257482066|ref|ZP_05636107.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 65
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+N+ +SQ+RA + +YL +GV + +SVRG PI +N GR N+R+E+ + P
Sbjct: 1 HNMDLSQQRAQSVATYLTSQGVDQSH-LSVRGAGPDQPIASNADVNGRAQNRRVEVNLKP 59
>gi|110634419|ref|YP_674627.1| OmpA/MotB [Mesorhizobium sp. BNC1]
gi|110285403|gb|ABG63462.1| OmpA/MotB [Chelativorans sp. BNC1]
Length = 703
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 7/133 (5%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIA 112
L++ + + + + +P L+ +A +L + P+
Sbjct: 564 SLEEVRYSARVRDMVRRIDLDTINFEFGSASIAESEIPKLEGVANAMLEVLERNPAETFL 623
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD++G+ NL +S RAD + L + +G+ +Y +T+
Sbjct: 624 IEGHTDAVGSDVANLALSDRRADAVAEALSNVFGIPPENLVTQGYGEQYLKI--NTQERE 681
Query: 173 QNNQRIEI-QIFP 184
+ N+R+ I +I P
Sbjct: 682 RENRRVAIRRITP 694
>gi|253998520|ref|YP_003050583.1| flagellar motor protein MotB [Methylovorus sp. SIP3-4]
gi|313200598|ref|YP_004039256.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
gi|253985199|gb|ACT50056.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4]
gi|312439914|gb|ADQ84020.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
Length = 316
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 73/187 (39%), Gaps = 33/187 (17%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDM 71
+ K+K K T + K L + + + + + + I ++ G
Sbjct: 102 PKGKQKEVDIKDAKTALE-KAEQEKLAELKLKIEEAIDASATLSKFKKQLLIDITSEGLR 160
Query: 72 ITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----- 124
I + + S+ L+ +L I ++LN P+ I++ HTD++
Sbjct: 161 IQIVDEQNRPMFASSKAELQPYAKQILHEIGSMLNDVPN-KISLSGHTDAVPYPTGDKGY 219
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRG------FAYKYPIDTNDTKVGRQNNQRI 178
+N +S +RA+ + L+ G+ ++ + V G F + P++ N+RI
Sbjct: 220 SNWELSSDRANASRRELVAGGMDESKLLRVVGLSSASLFDKENPLNP--------VNRRI 271
Query: 179 EIQIFPR 185
I I +
Sbjct: 272 SIIIMNK 278
>gi|16125000|ref|NP_419564.1| OmpA family protein [Caulobacter crescentus CB15]
gi|221233721|ref|YP_002516157.1| heat resistant agglutinin [Caulobacter crescentus NA1000]
gi|13421980|gb|AAK22732.1| OmpA family protein [Caulobacter crescentus CB15]
gi|220962893|gb|ACL94249.1| heat resistant agglutinin [Caulobacter crescentus NA1000]
Length = 407
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V + L + ++Q A +T + + HTD+ G+ N +S+ R +
Sbjct: 301 VVYFPFDQYVLTPEAQAVVQQAADYAKGGNATRVVVTGHTDTSGSDAYNRKLSERRGRAV 360
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + ++V K P V N+R + I
Sbjct: 361 AD-GLVGMGLNAATVAVDWKGEKAPAVETGDGVKEPLNRRSSVSI 404
>gi|296447981|ref|ZP_06889887.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
gi|296254491|gb|EFH01612.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
Length = 381
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 60/140 (42%), Gaps = 10/140 (7%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNK 105
A+ E + V+ + + + + + V + + + ++ IA +L K
Sbjct: 240 AKAESANAQPGPHVEVTETAEGLLISLTDDANFSMFAIGSVKPKPQLVRIVGQIAGVLAK 299
Query: 106 FPSTVIAIQSHTDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P + ++ HTD+ +N +S +RA++ L++ G++ R + + G+A +
Sbjct: 300 QPG-EVELRGHTDARSYKSKVYDNWRLSADRANMAYYMLLRGGLAEKRVVKIAGYADRNL 358
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
+ N+RIEI +
Sbjct: 359 KAQKEPLA--AVNRRIEILV 376
>gi|281192981|gb|ADA57643.1| outer membrane protein A precursor [Aeromonas hydrophila]
Length = 343
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 16/152 (10%), Positives = 56/152 (36%), Gaps = 12/152 (7%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--P 107
+++ ++ + + + L+ + + L + + +F
Sbjct: 193 VAPAPAPVVEEAPAPAPQVVEKNFALNSDVLLAFGKDSLKPEGVAALNALYQQIVEFQPK 252
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID--T 165
+ +T+ IG+ N +S+ RA + ++L+ + + +++ G P+
Sbjct: 253 DGNAVVVGYTNRIGSDAYNQKLSEARARTVANFLVSK-GMAASKVAIEGRGEANPVTGTK 311
Query: 166 NDTKVGRQN-------NQRIEIQIFPRGNIKK 190
+ + ++R+E+++ ++K
Sbjct: 312 CNGVKAKAQLTSCLAPDRRVEVRVSGVQEVQK 343
>gi|153010830|ref|YP_001372044.1| OmpA/MotB domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151562718|gb|ABS16215.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 742
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + L+ +A +L K P I+ HTD++G+ ++NL+
Sbjct: 620 RIDLDTIHFATGSAEVSLSQAKTLRKVATAMQKVLAKDPGETFFIEGHTDAVGSDRSNLV 679
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
+S +RA+ + S L + + +G+ ++ T+ Q N+R+ I ++ P
Sbjct: 680 LSDKRAESVASLLTEVYEIPPENLVTQGYGERFLKI--RTQAAEQENRRVTIRRVTP 734
>gi|213024875|ref|ZP_03339322.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 189
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 58/155 (37%), Gaps = 10/155 (6%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLI 99
L +++ + + I + + G I + +E +L+ I
Sbjct: 1 AATDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAI 60
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISV 154
A +LN P+ I++ HTD +N +S +RA+ + L+ G+ + + + V
Sbjct: 61 APVLNGIPN-RISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKVLRV 119
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
G A + N+RI + + + +
Sbjct: 120 VGMAATMRLSDRGPDD--AINRRISLLVLNKQAEQ 152
>gi|296156473|ref|ZP_06839311.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295893072|gb|EFG72852.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 233
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 57/179 (31%), Gaps = 16/179 (8%)
Query: 5 LGLSMFIMTTISGCGLASREKKKV------FLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ +F+ + + K S + S+ D ++ L
Sbjct: 40 TLMVLFLALYVLQLAKTRELEIKALERHALTEAASAGNAQPSNAMPSAPDVSKKRLLALL 99
Query: 59 Q----DTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
I +S + I + F + L + +L IA +L I +
Sbjct: 100 APLQDKRQIAISNAAQGVEIAINAKILFNSGDARLLPESFEVLNQIAGVLRDRSKNNILV 159
Query: 114 QSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ HTD++ ++N +S RA + + + ++ G A +P+ D
Sbjct: 160 EGHTDNVPISTAKYESNWELSSARAGAVVRFFADK-GIEAHRMAAIGRADNFPLIIGDD 217
>gi|238897463|ref|YP_002923140.1| outer membrane protein 3a (II*;G;d) [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|188474314|gb|ACD49741.1| outer membrane protein A [Candidatus Hamiltonella defensa]
gi|229465218|gb|ACQ66992.1| outer membrane protein 3a (II*;G;d) [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 365
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNK-FPST-VIAIQSHT 117
T I + + + V F ++ L+K+ L + + L P + + +
Sbjct: 215 TKIDLEPVAQTQHFELKSDVLFGFNQWTLKKEGGEELNKLYSKLANVNPQEGSVTVLGFS 274
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV------- 170
D IG K N L+SQ+RA + YLI +G+SS+ ++G P+ +
Sbjct: 275 DRIGGDKYNQLLSQKRAQSVADYLISKGISSDTPFVIKGLGKSNPVTGSKCNEVKKRLEL 334
Query: 171 --GRQNNQRIEIQIF 183
++R+++++
Sbjct: 335 VNCLAPDRRVDVKVT 349
>gi|226225701|ref|YP_002759807.1| chemotaxis MotB protein [Gemmatimonas aurantiaca T-27]
gi|226088892|dbj|BAH37337.1| chemotaxis MotB protein [Gemmatimonas aurantiaca T-27]
Length = 289
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 12/151 (7%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-----PVHVSFVSEVFLEKKFLPM 95
+ + LDK ++ + + V + + + + + +
Sbjct: 107 QMRQAILDKLATSDSLKRLNAQVDVQVTQEGLRIELVESERGDVYFPIGSSQMNSATVLT 166
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRF 151
LQLI L+ ++I I+ HTD+ N +S +RA+ + L G+ R
Sbjct: 167 LQLIGQELSPIAQSLI-IEGHTDAAPFGRDASYTNWELSADRANAARRVLQAAGIDPKRI 225
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
VRG+A P ND K N+RI + I
Sbjct: 226 SEVRGYADTKPRVINDPKA--PANRRISVLI 254
>gi|116327318|ref|YP_797038.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116332067|ref|YP_801785.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116120062|gb|ABJ78105.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116125756|gb|ABJ77027.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 589
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+L+ I LN++P I +QSH+ G + N + ++ERA Y + V R I
Sbjct: 504 ILRSI---LNEYPGYNIELQSHSSHQGDEEVNQVQTEERARDAFEYFFSKKVPFGR-IRF 559
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
RG+ P+ K NQRI+ + P
Sbjct: 560 RGYGETLPLVPGSGKYEADKNQRIDFYLSP 589
>gi|85708815|ref|ZP_01039881.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
gi|85690349|gb|EAQ30352.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
Length = 378
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
E + + +L T + S + + HTD++G+ NL ++ R ++
Sbjct: 270 VFFDFDESAITSEAATILDNAVTAYSNCGSARVMLAGHTDTVGSQSYNLDLAARRNASVQ 329
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + I+ F V N+R+EI
Sbjct: 330 Q-YLTGRGVARSMIASEAFGESDLRVPTADGVRELQNRRVEIT 371
>gi|307302740|ref|ZP_07582496.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
gi|306903104|gb|EFN33695.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
Length = 633
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLL 128
+ + ++ +A +NK P I+ HTD++G ++NL+
Sbjct: 511 RIDLDTITFATGSAEVSMSQAKTMRNVAEAMNKVLEKDPGETFFIEGHTDAVGADQSNLV 570
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
+S ERA+ + L + + +G+ ++ D Q N+R+ I ++ P
Sbjct: 571 LSDERAESVAVLLTEVYGIPAENLVTQGYGERFLKIRTDGPE--QENRRVTIRRVTP 625
>gi|332162880|ref|YP_004299457.1| flagellar motor protein MotB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318604276|emb|CBY25774.1| flagellar motor rotation protein MotB [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325667110|gb|ADZ43754.1| Flagellar motor protein MotB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863328|emb|CBX73451.1| putative protein mbhA [Yersinia enterocolitica W22703]
Length = 272
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 15/165 (9%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQL----QDTGIVVSRIGDMITCYIPVH----VSFVS 84
+ + R G +++ + + + + + I + S
Sbjct: 85 EQSLEELVDRSGREMEELTRIITQITSAYDAQSNLKMEVVPQGLRILIQDDKHRDMFQRS 144
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSY 140
L F +L +A N+ I I HTD+ N +S ERA +
Sbjct: 145 SAVLTPFFSRLLAELAPAFNEM-DNKIIITGHTDASRYRDQVLYNNWNLSGERALMAHKA 203
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L++ G+ +R + + A + +D+ + N+RIEI + +
Sbjct: 204 LVKGGLDDDRVLQINAMAEQMLLDSAEPLA--AKNRRIEIMVLTK 246
>gi|33151319|ref|NP_872672.1| major outer membrane protein homolog, OmpA2 [Haemophilus ducreyi
35000HP]
gi|1872471|gb|AAB49274.1| OmpA2 [Haemophilus ducreyi]
gi|33147539|gb|AAP95061.1| major outer membrane protein-like protein, OmpA2 [Haemophilus
ducreyi 35000HP]
Length = 407
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+++ +L + + I + +TD IG + NL +SQ RA
Sbjct: 284 SDVLFDFAKADLKQEAAQVLDATNAEIVNLGLATPAIQVNGYTDRIGKEEANLKLSQRRA 343
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+++ +YL+ + + I+ G+ PI N ++R+E+Q+
Sbjct: 344 EMVANYLVAK-GQNPVSINAVGYGEANPITGNTCDAVKGRKQLIACLAPDRRVEVQV 399
>gi|304321119|ref|YP_003854762.1| chemotaxis MotB protein [Parvularcula bermudensis HTCC2503]
gi|303300021|gb|ADM09620.1| chemotaxis MotB protein [Parvularcula bermudensis HTCC2503]
Length = 254
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 57/162 (35%), Gaps = 11/162 (6%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV----HVSFVSEV 86
S K SS+ + + D + V+ + I + + V
Sbjct: 97 ADSTPKSREAKAIESSVKEMAKASGLDDADERVRVTVTDEGIVVQLIDAEGKSLFPVGSS 156
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS---IGTLKNNLLISQERADVIKSYLIQ 143
+ +L A I I HTDS G +N +S +RA+ + LI+
Sbjct: 157 TPSPELR-VLVKAAASAVAAGGKKIRIVGHTDSRQYQGYAYSNFELSADRANAARRLLIE 215
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
GV +R + G A + PI N N+RI I + R
Sbjct: 216 AGVDDSRLTEITGRADREPITDNPAD---PANRRIAIVLLDR 254
>gi|77359582|ref|YP_339157.1| outer membrane protein [Pseudoalteromonas haloplanktis TAC125]
gi|76874493|emb|CAI85714.1| conserved protein of unknown function ; putative outer membrane
protein [Pseudoalteromonas haloplanktis TAC125]
Length = 244
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ ++ L + +++ + V + F L + T+L P
Sbjct: 99 NSQLEQQIEVLANQNEQLTQSQINNLLAMTVQ-FKTGSRVIAPHFALQLDQLVTLLKNQP 157
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ + D G + NLL+S+ R + ++SYLI++GVS R +S + F + + +
Sbjct: 158 QLALDLSGFADQRGDEQANLLLSKARVNAVQSYLIKQGVSHTR-LSTQAFGEQQTLAKTN 216
Query: 168 TKVGRQNNQRIEIQ 181
T ++R+ +
Sbjct: 217 TVEDNTFDRRVTLT 230
>gi|34558375|ref|NP_908190.1| putative flagellar motor protein [Wolinella succinogenes DSM 1740]
gi|34484094|emb|CAE11090.1| HYPOTHETICAL PROTEIN-PUTATIVE FLAGELLAR MOTOR PROTEIN [Wolinella
succinogenes]
Length = 261
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 55/142 (38%), Gaps = 6/142 (4%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFL-EKKFLPMLQLIATILNKFP-S 108
E + V + +P + F + + ++ +A I+N+ P
Sbjct: 103 QEMAKVAEGPSSAVGSGSEGFIVRLPAALLFKEGGIEVENSDGFLFVKRMAEIVNRLPKD 162
Query: 109 TVIAIQSHTDSIG-TLKNNLLISQERADVI--KSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+ ++ HTD++ + + A S L+ + + I+ G + P+
Sbjct: 163 VHVEVRGHTDTLPLPAQAPQDKLELTAKRALSVSKLLVKEGIDPKRITTVGRGDQDPLTH 222
Query: 166 NDTKVGRQNNQRIEIQIFPRGN 187
T +++N+R++I ++P+
Sbjct: 223 ARTPEAQESNRRVDIYLYPKET 244
>gi|158327337|emb|CAM82843.1| flagellar motor protein MotB [Yersinia enterocolitica W22703]
Length = 302
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 15/165 (9%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQL----QDTGIVVSRIGDMITCYIPVH----VSFVS 84
+ + R G +++ + + + + + I + S
Sbjct: 115 EQSLEELVDRSGREMEELTRIITQITSAYDAQSNLKMEVVPQGLRILIQDDKHRDMFQRS 174
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSY 140
L F +L +A N+ I I HTD+ N +S ERA +
Sbjct: 175 SAVLTPFFSRLLAELAPAFNEM-DNKIIITGHTDASRYRDQVLYNNWNLSGERALMAHKA 233
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L++ G+ +R + + A + +D+ + N+RIEI + +
Sbjct: 234 LVKGGLDDDRVLQINAMAEQMLLDSAEPLA--AKNRRIEIMVLTK 276
>gi|148254925|ref|YP_001239510.1| putative chemotaxis protein MotB [Bradyrhizobium sp. BTAi1]
gi|146407098|gb|ABQ35604.1| putative chemotaxis protein MotB [Bradyrhizobium sp. BTAi1]
Length = 276
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 8/116 (6%)
Query: 73 TCYIPVHVSFVSEVFLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN----L 127
F + +++ +A L P + I HT + +
Sbjct: 152 IVDQDGRSMFADGSKVPYDRTRRLIEKLAAPLKATP-LRVQITGHTAAGFVPARSDYGAF 210
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S +RA+ ++ L + G+ + +V G A P+ +D N+R+ I +
Sbjct: 211 DLSADRANAVRQILEREGLPPSHIFAVSGKADTQPLFPDDP--SLAANRRVTITLM 264
>gi|24113274|ref|NP_707784.1| flagellar motor protein MotB [Shigella flexneri 2a str. 301]
gi|30063341|ref|NP_837512.1| flagellar motor protein MotB [Shigella flexneri 2a str. 2457T]
gi|110805869|ref|YP_689389.1| flagellar motor protein MotB [Shigella flexneri 5 str. 8401]
gi|24052278|gb|AAN43491.1| chemotaxis protein MotB [Shigella flexneri 2a str. 301]
gi|30041593|gb|AAP17321.1| chemotaxis protein MotB [Shigella flexneri 2a str. 2457T]
gi|110615417|gb|ABF04084.1| flagellar motor protein [Shigella flexneri 5 str. 8401]
gi|281601336|gb|ADA74320.1| Chemotaxis protein MotB [Shigella flexneri 2002017]
gi|332757207|gb|EGJ87544.1| chemotaxis protein motB [Shigella flexneri 2747-71]
gi|332757449|gb|EGJ87784.1| chemotaxis protein motB [Shigella flexneri K-671]
gi|332766620|gb|EGJ96824.1| motB protein, enables flagellar motor rotation, linking torque
machinery to cell wall [Shigella flexneri 2930-71]
gi|333004150|gb|EGK23682.1| chemotaxis protein motB [Shigella flexneri K-272]
gi|333017634|gb|EGK36946.1| chemotaxis protein motB [Shigella flexneri K-304]
Length = 308
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRLHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|312115743|ref|YP_004013339.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
gi|311220872|gb|ADP72240.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
Length = 789
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 4/118 (3%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIA 112
L + + M + + + P+LQ IA +N+ P V
Sbjct: 637 SLDEVLASPNLRDRMRSVRLNTIHFEFGSWEVRPDQAPLLQGIADSVNRIVQNNPGEVFL 696
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I+ HTD++GT ++NL +S RA + L Q + +G+ ++ +
Sbjct: 697 IEGHTDAVGTDEDNLSLSDRRAQAVADVLTQYYQVPRENLVTQGYGEQFLLVPTQGPE 754
>gi|304412488|ref|ZP_07394094.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307307147|ref|ZP_07586885.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|304349130|gb|EFM13542.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306910386|gb|EFN40817.1| OmpA/MotB domain protein [Shewanella baltica BA175]
Length = 306
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 14/153 (9%)
Query: 42 RFGSSLDKAEDEFQMQLQDT----GIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFL 93
+ L E +Q++ I V+ + I I +V ++ F
Sbjct: 122 DTQAQLTVLARELNRVVQNSSMAENIAVTIVPQGIRILIHDNVNQFMFTRGSAQMQPYFE 181
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNR 150
+L + IL ++++ I HTDS N N +S ERA + + L + GV ++
Sbjct: 182 ELLLSLGPILKNVTNSMV-ISGHTDSTPYAGNLFTNWELSSERALLARRVLERGGVKRDQ 240
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
I V G A + P DT N+RIE I
Sbjct: 241 VIQVTGMADQIPYIATDTAA--AANRRIEALIL 271
>gi|213027773|ref|ZP_03342220.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 123
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 34/121 (28%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGS--------- 45
M K + + I +SGC ++ + +V G+
Sbjct: 1 MKKRVFVIAAIVSGALAVSGCTTNPYTGEREAGKSGIGAGIGSLVGAGIGALSSSKKDRG 60
Query: 46 -------------------SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+D E + + +++ TG+ V+R GD I +P +V+F S
Sbjct: 61 KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
Query: 87 F 87
Sbjct: 121 A 121
>gi|294492517|gb|ADE91273.1| chemotaxis protein MotB [Escherichia coli IHE3034]
Length = 308
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 56/144 (38%), Gaps = 10/144 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G++ + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNGGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
+ N+RI + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNK 267
>gi|238795648|ref|ZP_04639162.1| hypothetical protein ymoll0001_14990 [Yersinia mollaretii ATCC
43969]
gi|238720374|gb|EEQ12176.1| hypothetical protein ymoll0001_14990 [Yersinia mollaretii ATCC
43969]
Length = 385
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 62/168 (36%), Gaps = 20/168 (11%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMITC--YIPVHVSFVS 84
++R L+K ++ ++ I + G I + +
Sbjct: 70 SEESRREEYRLNKLREKLDQLIESDPRLRALRPHLLINMMEEGLRIQIIDSQNRPMFKMG 129
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKS 139
+E +L+ IA ILN P+ I++ HTD + +N +S +RA+ +
Sbjct: 130 SAQVEPYMRDILRAIAPILNDIPN-KISLSGHTDDLPYANGERGYSNWELSADRANASRR 188
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
L+ G+ + + V G A + + N+RI I + +
Sbjct: 189 ELLIGGLDEGKVLRVVGMASTMRLKEQASDD--PVNRRISILVLNKQT 234
>gi|157414881|ref|YP_001482137.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 81116]
gi|157385845|gb|ABV52160.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 81116]
gi|307747518|gb|ADN90788.1| Chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni M1]
gi|315931798|gb|EFV10753.1| ompA family protein [Campylobacter jejuni subsp. jejuni 327]
Length = 317
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 16/153 (10%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ G + E Q +L + ++ + +P V F L+ + L+ I
Sbjct: 150 QNLGLIRENLSKELQSKLDNN---ITIDEKTGSISLPAEVLFDKDSYVLKNEAKASLRKI 206
Query: 100 ----ATILNKFPST-----VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN- 149
+ + P I I+ HTDS G+ NL +SQ+RA + +++ S
Sbjct: 207 LSEYFDAILEDPKIFSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKL 266
Query: 150 -RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + G ++ P+ N + ++RIEI+
Sbjct: 267 QKLLMASGRSFSDPVFVNG-VEDKDKSRRIEIK 298
>gi|104783884|ref|YP_610382.1| flagellar motor protein MotB [Pseudomonas entomophila L48]
gi|95112871|emb|CAK17599.1| putative flagellar motor MotB protein [Pseudomonas entomophila L48]
Length = 341
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 53/143 (37%), Gaps = 9/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + Q +++ G I + + + L+ F +L +A +
Sbjct: 134 EENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDLGSARLQPYFEDILLAMADTIKAV 193
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I+I HTD+ N +S RA+ + L+ G + V G+A
Sbjct: 194 PN-KISISGHTDAKPYAGTGDFGNWELSANRANAARRALVAGGYPDGQVARVVGYASSS- 251
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
+ + N+RI+I + +
Sbjct: 252 LFDRENPFN-PVNRRIDIIVLTK 273
>gi|91211113|ref|YP_541099.1| flagellar motor protein MotB [Escherichia coli UTI89]
gi|110642005|ref|YP_669735.1| flagellar motor protein MotB [Escherichia coli 536]
gi|117624039|ref|YP_852952.1| flagellar motor protein MotB [Escherichia coli APEC O1]
gi|191172996|ref|ZP_03034530.1| chemotaxis protein MotB [Escherichia coli F11]
gi|215487100|ref|YP_002329531.1| flagellar motor protein MotB [Escherichia coli O127:H6 str.
E2348/69]
gi|218558752|ref|YP_002391665.1| flagellar motor protein MotB [Escherichia coli S88]
gi|218689885|ref|YP_002398097.1| flagellar motor protein MotB [Escherichia coli ED1a]
gi|237705847|ref|ZP_04536328.1| flagellar motor protein MotB [Escherichia sp. 3_2_53FAA]
gi|300935867|ref|ZP_07150825.1| chemotaxis protein MotB [Escherichia coli MS 21-1]
gi|300982219|ref|ZP_07175931.1| chemotaxis protein MotB [Escherichia coli MS 200-1]
gi|312967092|ref|ZP_07781310.1| chemotaxis protein motB [Escherichia coli 2362-75]
gi|331657937|ref|ZP_08358899.1| chemotaxis protein MotB [Escherichia coli TA206]
gi|91072687|gb|ABE07568.1| chemotaxis MotB protein [Escherichia coli UTI89]
gi|110343597|gb|ABG69834.1| chemotaxis MotB protein [Escherichia coli 536]
gi|115513163|gb|ABJ01238.1| chemotaxis MotB protein [Escherichia coli APEC O1]
gi|190906707|gb|EDV66312.1| chemotaxis protein MotB [Escherichia coli F11]
gi|215265172|emb|CAS09560.1| protein that enables flagellar motor rotation [Escherichia coli
O127:H6 str. E2348/69]
gi|218365521|emb|CAR03248.1| protein that enables flagellar motor rotation [Escherichia coli
S88]
gi|218427449|emb|CAV17777.1| protein that enables flagellar motor rotation [Escherichia coli
ED1a]
gi|222033636|emb|CAP76377.1| chemotaxis protein motB [Escherichia coli LF82]
gi|226900604|gb|EEH86863.1| flagellar motor protein MotB [Escherichia sp. 3_2_53FAA]
gi|300307289|gb|EFJ61809.1| chemotaxis protein MotB [Escherichia coli MS 200-1]
gi|300458979|gb|EFK22472.1| chemotaxis protein MotB [Escherichia coli MS 21-1]
gi|307626628|gb|ADN70932.1| flagellar motor protein MotB [Escherichia coli UM146]
gi|312288556|gb|EFR16458.1| chemotaxis protein motB [Escherichia coli 2362-75]
gi|312946487|gb|ADR27314.1| flagellar motor protein MotB [Escherichia coli O83:H1 str. NRG
857C]
gi|315286597|gb|EFU46030.1| chemotaxis protein MotB [Escherichia coli MS 110-3]
gi|315296507|gb|EFU55804.1| chemotaxis protein MotB [Escherichia coli MS 16-3]
gi|320194396|gb|EFW69027.1| Flagellar motor rotation protein MotB [Escherichia coli WV_060327]
gi|323186771|gb|EFZ72091.1| chemotaxis protein motB [Escherichia coli RN587/1]
gi|323952390|gb|EGB48263.1| OmpA family protein [Escherichia coli H252]
gi|323956291|gb|EGB52034.1| OmpA family protein [Escherichia coli H263]
gi|324007255|gb|EGB76474.1| chemotaxis protein MotB [Escherichia coli MS 57-2]
gi|324013535|gb|EGB82754.1| chemotaxis protein MotB [Escherichia coli MS 60-1]
gi|331056185|gb|EGI28194.1| chemotaxis protein MotB [Escherichia coli TA206]
Length = 308
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 56/144 (38%), Gaps = 10/144 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G++ + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNGGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
+ N+RI + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNK 267
>gi|228471772|ref|ZP_04056545.1| putative immunoreactive 43 kDa antigen PG32 [Capnocytophaga
gingivalis ATCC 33624]
gi|228276925|gb|EEK15620.1| putative immunoreactive 43 kDa antigen PG32 [Capnocytophaga
gingivalis ATCC 33624]
Length = 391
Score = 53.9 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 1/119 (0%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ + E E Q V+ R + V++ +E LP ++ I
Sbjct: 253 SDSQKRIAQLEKELQEARNKKPEVIERTITKSKKTLESVVTYRVGRTNIESSQLPNVERI 312
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
AT L K+P++ + I+ + G L+ N ++ +RA+ +K L+ R S+ I G
Sbjct: 313 ATYLKKYPNSKVVIKGYASPEGNLEKNQKLAADRAESVKKILVTRYKISSDRIQAEGNG 371
>gi|330894565|gb|EGH27226.1| OmpA/MotB [Pseudomonas syringae pv. mori str. 301020]
Length = 73
Score = 53.9 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S+ RA+ ++ L++ GV R ++ G+ +YP+ N + GR N+R+E+ I
Sbjct: 1 ASYNQSLSERRANSVRMALVRMGVDPARVVT-MGYGKEYPVADNTSNSGRAMNRRVEVTI 59
Query: 183 F-------PRGNIK 189
PR ++K
Sbjct: 60 SNDNQPVAPRSSMK 73
>gi|301018263|ref|ZP_07182776.1| chemotaxis protein MotB [Escherichia coli MS 69-1]
gi|306814281|ref|ZP_07448447.1| flagellar motor protein MotB [Escherichia coli NC101]
gi|300399773|gb|EFJ83311.1| chemotaxis protein MotB [Escherichia coli MS 69-1]
gi|305852440|gb|EFM52891.1| flagellar motor protein MotB [Escherichia coli NC101]
Length = 308
Score = 53.9 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G++ + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNGGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|114799250|ref|YP_759621.1| putative chemotaxis protein MotB [Hyphomonas neptunium ATCC 15444]
gi|114739424|gb|ABI77549.1| putative chemotaxis protein MotB [Hyphomonas neptunium ATCC 15444]
Length = 226
Score = 53.9 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 62/192 (32%), Gaps = 17/192 (8%)
Query: 5 LGLSMFIMT--TISGCGLASREKKKVFLHKSNDT-----DIVNKRFGSSLDKAEDEFQMQ 57
L F M +SG R + D L ++
Sbjct: 34 TALVAFFMLMWLVSGVSKEDRAVIASEFTGKPVSTAFHSDQAVSGAAELLALLRQSEGLK 93
Query: 58 LQDTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ +S + + + L ++Q A L+ P ++I
Sbjct: 94 AAGESVQLSSDATGVRIELVDTAGRPLFETGSGALTADGAALIQAAAMSLSGLP-YALSI 152
Query: 114 QSH---TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ H G +N +S +RA+ + L G ++R +V G+A P+ N +
Sbjct: 153 EGHTDAFSMTGAASSNWELSSQRANEARRALEMAGFGTDRVKAVTGYADTRPL--NAGQP 210
Query: 171 GRQNNQRIEIQI 182
N+RI +Q+
Sbjct: 211 HLAANRRISLQV 222
>gi|331683396|ref|ZP_08383997.1| chemotaxis protein MotB [Escherichia coli H299]
gi|284921808|emb|CBG34881.1| chemotaxis protein MotB (motility protein B) [Escherichia coli 042]
gi|331079611|gb|EGI50808.1| chemotaxis protein MotB [Escherichia coli H299]
Length = 308
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G++ + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNGGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|255534155|ref|YP_003094527.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255347139|gb|ACU06465.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 568
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 44/89 (49%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
VS + + + + +L + ++++ P+ I + SHTDS G
Sbjct: 472 VSNLDAGTVFVLKNIHYDFDKSNIRPDAGRILDNLLNVMSQNPTLKIELSSHTDSRGKDA 531
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFIS 153
NL +SQ+RA+ +YL+ +GV+ +R ++
Sbjct: 532 YNLRLSQQRAEAAVNYLVGKGVARDRMVA 560
>gi|117922218|ref|YP_871410.1| chemotaxis protein MotB-like protein [Shewanella sp. ANA-3]
gi|117614550|gb|ABK50004.1| chemotaxis protein MotB-related protein [Shewanella sp. ANA-3]
Length = 243
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 33/213 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + ++ ++ L +K ++ ++ K+ + + + +L I
Sbjct: 25 LMSGLLVIFILAAVALIIELTQKSEQIDASIEEL--KKAEEARRNILIDIKEELAKQNIH 82
Query: 65 VSRIGDMITCYIPVHVSFVSE--------VFLEKKFLPMLQLIATILNKFPSTV----IA 112
V + + IP ++ + + + + +
Sbjct: 83 VEIVENDTVLRIPESTLSFESGKDTLPENTTVKNEVRLIGIALHKAITTNERWKYLDTVF 142
Query: 113 IQSHTDSIGTL---KNNLLISQERADVIKSYLIQRGVSSNRF-----------ISVRGFA 158
++ HTDS G K N +S +RA I + + SV G+A
Sbjct: 143 VEGHTDSNGIWYRGKGNWGLSTDRAVSIWKLWQTEINVAPKLSVLTNYNGQLLFSVSGYA 202
Query: 159 YKYPID-TNDTKVGRQNNQRIEIQIFPRGNIKK 190
+D T+ R N+RI+I+ +KK
Sbjct: 203 DTRRVDLQETTEEQRARNRRIDIRFT----VKK 231
>gi|269123640|ref|YP_003306217.1| OmpA/MotB domain-containing protein [Streptobacillus moniliformis
DSM 12112]
gi|268314966|gb|ACZ01340.1| OmpA/MotB domain protein [Streptobacillus moniliformis DSM 12112]
Length = 314
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 47/119 (39%), Gaps = 6/119 (5%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + ++ ++ L KK + ++ + L + I + +TD+ G
Sbjct: 201 SFDENKNKVEEIYTIYGFNSNKFILNKKQIDVIDALVPNLQ---NREIIVIGYTDTDGND 257
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K NL + RA+ + ++ I GF I N+T + N+R+E+ +
Sbjct: 258 KYNLELGLNRANSV-KVYLENKGIKVNQIRTVGFNE--LITNNNTLENKSLNRRVELIV 313
>gi|241763663|ref|ZP_04761713.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
gi|241367138|gb|EER61504.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
Length = 310
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 61/179 (34%), Gaps = 11/179 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + + + + + + + I V+ G I
Sbjct: 110 ASIDTTRAERAKQDAARIKALQAKIDAMITE-NPRLNEYKSQIRIDVTPDGLQIQIVDNQ 168
Query: 79 H--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQ 131
+ + ++ +L+ I L + I++ HTD+ +N +S
Sbjct: 169 NRPMFDSGSALVKPYMRDILREIGAALGGVEN-RISLAGHTDAAPYGNSDRGYSNWELSA 227
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+RA+ + L+ G+ + V G A ++ ++ + N+RI I + R ++
Sbjct: 228 DRANASRRELVSAGMPDAKLGRVVGLAASDLLEPDNPRA--PANRRITITVLTREAEER 284
>gi|281178957|dbj|BAI55287.1| chemotaxis protein MotB [Escherichia coli SE15]
Length = 308
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G++ + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNGGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|218548503|ref|YP_002382294.1| flagellar motor protein MotB [Escherichia fergusonii ATCC 35469]
gi|218356044|emb|CAQ88660.1| protein that enables flagellar motor rotation [Escherichia
fergusonii ATCC 35469]
gi|324113675|gb|EGC07650.1| OmpA family protein [Escherichia fergusonii B253]
gi|325496923|gb|EGC94782.1| flagellar motor protein MotB [Escherichia fergusonii ECD227]
Length = 304
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 71/212 (33%), Gaps = 39/212 (18%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKR-------------FGSSLDKAEDEFQMQ 57
+ T I+G S + + + T + S L++ +
Sbjct: 67 LATAITGGDRISNSQSPIPGGGDDYTQQQGEVNRQPSIEELKKHMEQSRLNRLRGDLDQL 126
Query: 58 LQDTG----------IVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
++ I + + G I + +E +L+ IA +LN
Sbjct: 127 IESDPKLRALRPHLKIDMVQEGLRIQIIDSQNRPMFKTGSADVEPYMRDILRAIAPVLNG 186
Query: 106 FPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
P+ I++ HTD +N +S +RA+ + L+ G+ + + V G A
Sbjct: 187 IPN-RISLAGHTDDYPYANGERGYSNWELSADRANASRRELMVGGLEEGKLLRVVGMAAT 245
Query: 161 YPIDT---NDTKVGRQNNQRIEIQIFPRGNIK 189
+ ND N+RI + + + +
Sbjct: 246 MRLSDRGGND-----AINRRISLLVLNKQTEQ 272
>gi|331647484|ref|ZP_08348576.1| chemotaxis protein MotB [Escherichia coli M605]
gi|330911699|gb|EGH40209.1| flagellar motor rotation protein MotB [Escherichia coli AA86]
gi|331043208|gb|EGI15346.1| chemotaxis protein MotB [Escherichia coli M605]
Length = 308
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G++ + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNGGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|91975488|ref|YP_568147.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91681944|gb|ABE38246.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 212
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 51/153 (33%), Gaps = 7/153 (4%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQ-DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
S + +D + L ++ + + + +K
Sbjct: 53 SASRPAADPAERQFVDTLRNRTTRSLSSGEREQIATLAKDKPNIDLEITFDYNSANISRK 112
Query: 92 FLPMLQLIATILNKFPSTV---IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
P + + L P + HTDSIG N +S+ RAD IK L+++ +
Sbjct: 113 AEPAVDALGKAL-SNPDLKGSTFVVAGHTDSIGGDAYNQELSERRADTIKRVLVEKYGIA 171
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ G+ P D +N+R+++
Sbjct: 172 GSDLVTVGYGENKPKDAVRPAD--PSNRRVQVV 202
>gi|126176136|ref|YP_001052285.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|125999341|gb|ABN63416.1| OmpA/MotB domain protein [Shewanella baltica OS155]
Length = 306
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 14/153 (9%)
Query: 42 RFGSSLDKAEDEFQMQLQDT----GIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFL 93
+ L E +Q++ I V+ + I I +V ++ F
Sbjct: 122 DTQAQLTVLARELNRVVQNSSMAENIAVTIVPQGIRILIHDNVNQFMFTRGSAQMQPYFE 181
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNR 150
+L + IL ++++ I HTDS N N +S ERA + + L + GV ++
Sbjct: 182 ELLLSLGPILKNVTNSMV-ISGHTDSTPYAGNLFTNWELSSERALLARRVLERGGVKRDQ 240
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
I V G A + P DT N+RIE I
Sbjct: 241 VIQVTGMADQIPYIATDTAA--AANRRIEALIL 271
>gi|57238205|ref|YP_178714.1| chemotaxis protein MotB, putative [Campylobacter jejuni RM1221]
gi|86149924|ref|ZP_01068153.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|148925958|ref|ZP_01809645.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|283956011|ref|ZP_06373500.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 1336]
gi|57167009|gb|AAW35788.1| chemotaxis protein MotB, putative [Campylobacter jejuni RM1221]
gi|85839742|gb|EAQ57002.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|145844944|gb|EDK22048.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|283792487|gb|EFC31267.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 1336]
gi|315927335|gb|EFV06679.1| Chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni DFVF1099]
Length = 317
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 16/153 (10%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ G + E Q +L + ++ + +P V F L+ + L+ I
Sbjct: 150 QNLGLIRENLSKELQSKLDNN---ITIDEKTGSISLPAEVLFDKDSYVLKNEAKASLRKI 206
Query: 100 ----ATILNKFPST-----VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN- 149
+ + P I I+ HTDS G+ NL +SQ+RA + +++ S
Sbjct: 207 LSEYFDAILEDPKIFSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKL 266
Query: 150 -RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + G ++ P+ N + ++RIEI+
Sbjct: 267 QKLLMASGRSFSDPVFVNG-VEDKDKSRRIEIK 298
>gi|255014570|ref|ZP_05286696.1| hypothetical protein B2_11729 [Bacteroides sp. 2_1_7]
gi|293373684|ref|ZP_06620031.1| chemotaxis protein MotB family protein [Bacteroides ovatus SD CMC
3f]
gi|292631339|gb|EFF49970.1| chemotaxis protein MotB family protein [Bacteroides ovatus SD CMC
3f]
Length = 231
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 66/179 (36%), Gaps = 18/179 (10%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDM---ITCYIPVHVSFVS 84
K+ + + KR+ + + Q + +D V D I P +
Sbjct: 41 QVQEKAEQDEEIVKRYDQIKTQLYIDLQQEFKDDLAVWRATIDSTLCIRFQEPSMLFDEG 100
Query: 85 EVFLEKKFLPMLQL--------IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L+ KF +L ++ + I I+ HT+S G +N+ +SQ+R
Sbjct: 101 QSLLKPKFKNILDDFFPRYIAVLSRDEYRDNIEEIRIEGHTNSNGGYYSNMELSQDRTRA 160
Query: 137 IKSYLIQRGVSS-----NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ Y ++ G + + I + + + ++R+E ++ R N +K
Sbjct: 161 VLQYCFSLMSDDLEEWLKGLVTANGLSSSHLILKMNGEEDKDLSRRVEFRV--RTNAEK 217
>gi|288958120|ref|YP_003448461.1| chemotaxis protein [Azospirillum sp. B510]
gi|288910428|dbj|BAI71917.1| chemotaxis protein [Azospirillum sp. B510]
Length = 386
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 68/173 (39%), Gaps = 15/173 (8%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM----QLQDTGIVVSRIGDMITCYIPV 78
E+ K ++ ++F + + Q + +++ + + + I
Sbjct: 185 GERVKEAMNSLQGAAKEARQFQQAATEIRQAIQSVPELEPLAQNLMIDQTPEGLRIQIVD 244
Query: 79 H----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLIS 130
+ + + ++Q +A L K P+ ++I HTDS +N +S
Sbjct: 245 QDRVSMFPAGSGQMYPQTRQLVQQVAKALTKLPN-KLSISGHTDSSPFPAGSGRDNWDLS 303
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
ERA+ + L+ G++ +R +V G A P+ + R N+RI + +
Sbjct: 304 TERANATRRALLAGGINPSRIQNVVGKADTDPLVADQPNSPR--NRRITMVLL 354
>gi|209964663|ref|YP_002297578.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
gi|209958129|gb|ACI98765.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
Length = 364
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 63/168 (37%), Gaps = 19/168 (11%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMITCYIPVH----VSFVS 84
+ + K + E + +Q +V+ + + + +
Sbjct: 179 EALAKLEQEQFQRTAQELRQAIQQVPELRELSQNLVIDNTPEGLRIQLVDQEGYSMFPSG 238
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSY 140
+ + ++ L+A + K P+ +++ HTDS +N +S ERA+
Sbjct: 239 SANMLPQTAQLMALVAQAVGKLPN-HLSVSGHTDSTPFAAGSSRSNWDLSTERANASVRA 297
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
L+ GV NR V G A + + +D + R N+R+ I + +
Sbjct: 298 LLAAGVPENRIDQVTGRADRDHLFPDDPRSPR--NRRVSIVLLREQEL 343
>gi|104782093|ref|YP_608591.1| periplamic phosphate-binding protein [Pseudomonas entomophila L48]
gi|95111080|emb|CAK15800.1| putative periplamic phosphate-binding protein [Pseudomonas
entomophila L48]
Length = 435
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 48/159 (30%), Gaps = 10/159 (6%)
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV-SFVSEVF 87
+ + + + +Q R + V+
Sbjct: 281 AEFAQSPAGQAIVAEQGFVAQQIKALPVTVQPGMPPRYRALASEARRLTVNFRFQEGSAS 340
Query: 88 LEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
L+ K L +Q + L V+ L S+ RA ++ L +
Sbjct: 341 LDNKALRDVQRVGDYLRHAGKLHEQAVLVGFGDPKETPGRAALL--SRLRAMAVRRELAR 398
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
GV V G + P+ ND + GR N+R+E+ +
Sbjct: 399 AGVEVKD---VAGMGDELPVAGNDLEQGRLRNRRVEVWV 434
>gi|21672596|ref|NP_660663.1| outer membrane protein A precursor [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25090843|sp|Q8K9L4|OMPA_BUCAP RecName: Full=OmpA-like protein; Flags: Precursor
gi|21623226|gb|AAM67874.1| outer membrane protein A precursor [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 347
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 13/132 (9%)
Query: 65 VSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIG 121
+ + D + +++F + L+ LQ + + K + I + H D IG
Sbjct: 216 IPQSSDKQYVALNENINFPFNSTELKPISHDKLQKLQKEIKNIKSKNIFIMLSGHADRIG 275
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY----KYPIDTNDTK-----VGR 172
+ N +S+ RA IK+Y S IS++G I + +
Sbjct: 276 NKEYNQKLSENRAYSIKNYFTS-HGISQDKISIQGMGNEFSLTNQICKDVSDRPLLISCL 334
Query: 173 QNNQRIEIQIFP 184
++R+EI++
Sbjct: 335 APDRRVEIEVLS 346
>gi|333003303|gb|EGK22849.1| chemotaxis protein motB [Shigella flexneri K-218]
Length = 265
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 84 ESDPKLRALRLHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 143
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 144 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 202
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 203 RLSDRGPDD--AVNRRISLLVLNKQAEQ 228
>gi|251733441|emb|CAR82470.1| pal [Mesorhizobium loti]
Length = 87
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ L A LN++ I ++ H D GT + NL + RA + +L+
Sbjct: 2 DSTSIRADAQTTLARQAQWLNQYKQYAIVVEGHADERGTREYNLALGARRAAATRDFLVA 61
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDT 168
+GVS++R ++ + + P+ D
Sbjct: 62 KGVSASRLKTIS-YGKERPVAVCDD 85
>gi|146298734|ref|YP_001193325.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146153152|gb|ABQ04006.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 267
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 39/118 (33%), Gaps = 14/118 (11%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG--------TLKN 125
Y+ + + L L IA L K + I+ H
Sbjct: 154 IYLESILFDMGSARLTHNSKRELDKIALTLLKQKNIQFEIRGHVCCTPEIYSDGIDKDTK 213
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S RA + +YL + VS NR +G K+P+ D +R+E I
Sbjct: 214 ERRLSWNRAKNVFNYLSSKKVSKNRM-RYQGCGNKFPLRMGDNYD-----RRVEFLIT 265
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 6/119 (5%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
I + L + ++ ++ I I + D GT N +S +R +
Sbjct: 22 IETVYFDFDKYNLTESQSKVVNNFIKSIDTAKVESIQIYGYCDDRGTDDYNFRLSHDRVN 81
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG----RQNNQRIEIQIFPRGNIKK 190
I++ L+ G ++ + + G + DT R N+R+++ + R + K
Sbjct: 82 TIQNLLVSSGFKESKIVILEGKG--RVVVRPDTVENLYETRLRNRRVDLIVVKRNSFGK 138
>gi|86153447|ref|ZP_01071651.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|85843173|gb|EAQ60384.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni HB93-13]
Length = 317
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 63/153 (41%), Gaps = 16/153 (10%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ G + E Q +L + ++ + +P V F L+ + L+ I
Sbjct: 150 QNLGFIRENLSKELQSKLDNN---ITIDEKTGSISLPAEVLFDKDSYVLKNEAKASLRKI 206
Query: 100 ----ATILNKFPST-----VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN- 149
+ + P I I+ HTDS G+ NL +SQ+RA + +++ S+
Sbjct: 207 LSEYFDAILEDPKIFSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSNKL 266
Query: 150 -RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + G ++ P+ N + ++RIEI+
Sbjct: 267 QKLLMASGRSFSDPVFVNG-VEDKDKSRRIEIK 298
>gi|290474940|ref|YP_003467824.1| flagellar protein [Xenorhabdus bovienii SS-2004]
gi|289174257|emb|CBJ81046.1| enables flagellar motor rotation, linking torque machinery to cell
wall [Xenorhabdus bovienii SS-2004]
Length = 333
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 20/153 (13%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
L + + + D G+ + I + + +E +LQ IA ILN+
Sbjct: 130 LKELRPHLLIDMMDEGLRIQ-----IIDRENRPMFMIGSAKVESYMRDILQAIAPILNEI 184
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK- 160
P+ +++ HTD++ +N +S +RA+ + L+ G+ + + V G A
Sbjct: 185 PN-KVSLSGHTDNLQYANGQRGYSNWELSADRANASRRELLNGGLDEVKILRVVGMASTV 243
Query: 161 ---YPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
ID N N+RI I + + K+
Sbjct: 244 SMQKGIDPNAP-----VNRRISIVVLNKDAEKR 271
>gi|124005287|ref|ZP_01690128.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123989109|gb|EAY28687.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 436
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 41/111 (36%), Gaps = 7/111 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATIL--NKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ L K L L + + + DS+G + N ++
Sbjct: 27 VRTSSVYFAYKQSELSAKAKQKLDQTFARLYRKQVLDYEVTLTGLADSVGNVAANHQLAN 86
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+RA +K+YLI + ++V+ + + + + N+R+EI +
Sbjct: 87 KRALAVKTYLIAQ-GVGADKVTVKVLGER----PANNEDEHRRNRRVEIVL 132
>gi|254476085|ref|ZP_05089471.1| OmpA family protein [Ruegeria sp. R11]
gi|214030328|gb|EEB71163.1| OmpA family protein [Ruegeria sp. R11]
Length = 196
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 81 SFVSEVFLEKKFLPMLQLIATIL--NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L ++ L +A +L + ++ + + HTDSIG+ + N+ +S+ RA +
Sbjct: 86 FPFNSNALTPEYEAHLARLAAVLSSAQLQNSCVKLVGHTDSIGSDQFNMRLSKTRAQRVA 145
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+YL G + I K+ I N+R+EI
Sbjct: 146 AYLALEGGVAMERIQTASLGEKHLIK--GLPGPHPLNRRVEIL 186
>gi|311745705|ref|ZP_07719490.1| putative thrombospondin type 3 repeat:OmpA/MotB [Algoriphagus sp.
PR1]
gi|311302419|gb|EAZ79498.2| putative thrombospondin type 3 repeat:OmpA/MotB [Algoriphagus sp.
PR1]
Length = 426
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A + K P + ++ + D +G N+ +S+ RA + LI GV +R +S +G
Sbjct: 342 NYVANFMKKNPGVNVEVKGYADELGPEDYNMKLSERRAKAVYDLLIASGVDGSR-LSYKG 400
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + + RQ +R ++
Sbjct: 401 YGEDTSV-DKSSADARQMARRASFEV 425
>gi|313650105|gb|EFS14518.1| chemotaxis protein motB [Shigella flexneri 2a str. 2457T]
gi|332756040|gb|EGJ86393.1| chemotaxis protein motB [Shigella flexneri 4343-70]
gi|333017760|gb|EGK37067.1| chemotaxis protein motB [Shigella flexneri K-227]
Length = 275
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 94 ESDPKLRALRLHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 153
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 154 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 212
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 213 RLSDRGPDD--AVNRRISLLVLNKQAEQ 238
>gi|293410200|ref|ZP_06653776.1| motB [Escherichia coli B354]
gi|291470668|gb|EFF13152.1| motB [Escherichia coli B354]
Length = 241
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 10/144 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 60 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 119
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 120 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 178
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
+ N+RI + + +
Sbjct: 179 RLSDRGPDD--AVNRRISLLVLNK 200
>gi|85706953|ref|ZP_01038043.1| Outer membrane protein, OmpA/MotB family protein [Roseovarius sp.
217]
gi|85668564|gb|EAQ23435.1| Outer membrane protein, OmpA/MotB family protein [Roseovarius sp.
217]
Length = 630
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 47/126 (37%), Gaps = 6/126 (4%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN----KFPSTVIA 112
L+ V + + ++ L+ + ++ + P+ +
Sbjct: 493 SLRQVRETVEVRQMSPEINLQNVTFATASAAIQPSQAENLREMGVMMRDLIAEDPTELFL 552
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ +TD++G NLL+S RA+ + + + V+G+ Y T+
Sbjct: 553 IEGYTDAVGAPGYNLLLSDRRAESVALAFSEYFDVPAENMVVQGYGESYLKIP--TQEAE 610
Query: 173 QNNQRI 178
+ N+R+
Sbjct: 611 RLNRRV 616
>gi|213620924|ref|ZP_03373707.1| hypothetical protein SentesTyp_26862 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 67
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
NL++S++RA + + L GV + R + + G P+ N +K GR N+R+EI +
Sbjct: 10 NLVLSEKRAAEVAALLTSGGVPAGR-VHIVGKGDTVPVADNGSKAGRAKNRRVEILVV 66
>gi|86151560|ref|ZP_01069774.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 260.94]
gi|121613602|ref|YP_001000300.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005251|ref|ZP_02271009.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 81-176]
gi|315124117|ref|YP_004066121.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841189|gb|EAQ58437.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 260.94]
gi|87250368|gb|EAQ73326.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 81-176]
gi|315017839|gb|ADT65932.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 317
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 16/153 (10%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ G + E Q +L + ++ + +P V F L+ + L+ I
Sbjct: 150 QNLGFIRENLSKELQSKLDNN---ITIDEKTGSISLPAEVLFDKDSYVLKNEAKASLRKI 206
Query: 100 ----ATILNKFPST-----VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN- 149
+ + P I I+ HTDS G+ NL +SQ+RA + +++ S
Sbjct: 207 LSEYFDAILEDPKIFSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKL 266
Query: 150 -RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + G ++ P+ N + ++RIEI+
Sbjct: 267 QKLLMASGRSFSDPVFVNG-VEDKDKSRRIEIK 298
>gi|257097127|pdb|2ZVY|A Chain A, Structure Of The Periplasmic Domain Of Motb From
Salmonella (Crystal Form Ii)
gi|257097128|pdb|2ZVY|B Chain B, Structure Of The Periplasmic Domain Of Motb From
Salmonella (Crystal Form Ii)
gi|257097129|pdb|2ZVZ|A Chain A, Structure Of The Periplasmic Domain Of Motb From
Salmonella (Crystal Form Iii)
gi|257097130|pdb|2ZVZ|B Chain B, Structure Of The Periplasmic Domain Of Motb From
Salmonella (Crystal Form Iii)
Length = 183
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 30 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGI 89
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ + + + V G A
Sbjct: 90 PN-RISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATM 148
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 149 RLSDRGPDD--AINRRISLLVLNKQAEQ 174
>gi|26248156|ref|NP_754196.1| flagellar motor protein MotB [Escherichia coli CFT073]
gi|227885682|ref|ZP_04003487.1| flagellar motor protein MotB [Escherichia coli 83972]
gi|300994031|ref|ZP_07180650.1| chemotaxis protein MotB [Escherichia coli MS 45-1]
gi|301050754|ref|ZP_07197612.1| chemotaxis protein MotB [Escherichia coli MS 185-1]
gi|26108560|gb|AAN80763.1|AE016762_16 Chemotaxis motB protein [Escherichia coli CFT073]
gi|227837255|gb|EEJ47721.1| flagellar motor protein MotB [Escherichia coli 83972]
gi|300297571|gb|EFJ53956.1| chemotaxis protein MotB [Escherichia coli MS 185-1]
gi|300406399|gb|EFJ89937.1| chemotaxis protein MotB [Escherichia coli MS 45-1]
gi|307553906|gb|ADN46681.1| flagellar motor rotation protein [Escherichia coli ABU 83972]
gi|315290318|gb|EFU49694.1| chemotaxis protein MotB [Escherichia coli MS 153-1]
Length = 308
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 56/144 (38%), Gaps = 10/144 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G++ + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNGGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
+ N+RI + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNK 267
>gi|283954121|ref|ZP_06371646.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 414]
gi|283794400|gb|EFC33144.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 414]
Length = 317
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 16/153 (10%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ G + E Q +L + ++ + +P V F L+ + L+ I
Sbjct: 150 QNLGLIRENLSKELQSKLDNN---ITIDEKTGSISLPAEVLFDKDSYVLKNEAKASLRKI 206
Query: 100 ----ATILNKFPST-----VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN- 149
+ + P I I+ HTDS G+ NL +SQ+RA + +++ S
Sbjct: 207 LSEYFDAILEDPKILSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKL 266
Query: 150 -RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + G ++ P+ N + ++RIEI+
Sbjct: 267 QKLLMASGRSFSDPVFLNG-VEDKDKSRRIEIK 298
>gi|295690006|ref|YP_003593699.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295431909|gb|ADG11081.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
Length = 299
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 20/177 (11%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMITCYIPVH 79
+ D + K+ S A + LQD I++ + + + +
Sbjct: 122 SSASEQALRDALAKKEQDSFASAAQSLRQSLQDMPELAELSKQILIDQTPEGLRIQLVDQ 181
Query: 80 ----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT---LKNNLLISQE 132
+ + + +L+ +A ++ + P+ + I HT + + +S
Sbjct: 182 EGRSMFQENSKVPNDRARILLRAVAKVITQLPN-RVTISGHTSASAYGKKQDGDWSLSAS 240
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPI-DTNDTKVGRQNNQRIEIQIFPRGNI 188
RAD + L GV +R V G A P+ + T G N+RI I + +
Sbjct: 241 RADASRQILRAAGVDDDRIYQVSGKANSEPLYADDPTLAG---NRRISIVLLREKPV 294
>gi|238024905|ref|YP_002909137.1| OmpA/MotB [Burkholderia glumae BGR1]
gi|237879570|gb|ACR31902.1| OmpA/MotB [Burkholderia glumae BGR1]
Length = 225
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 60/169 (35%), Gaps = 10/169 (5%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL----QD 60
+ +F+ + + + + ++ R G+ A L
Sbjct: 38 TLMVLFLALYVLQLARSRELELRSVEKQAASQTTQGTRAGAESTAARQRMLALLEPLRAK 97
Query: 61 TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
I ++ + + I + F E L + + +L +A +L + I ++ HTDS
Sbjct: 98 HEISIASLPQGVEVTINAKILFNSGEAHLLPESMDVLDQVAAVLRDPLTANIIVEGHTDS 157
Query: 120 IGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ ++N +S RA + +L+ + ++ G A P+
Sbjct: 158 VPISTSKYESNWELSSARAGAVVRFLMDK-GVGAHRMAAVGRADNVPLV 205
>gi|144898281|emb|CAM75145.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 300
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 1/107 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L + ++ + P +I + +TD+ GT N +S R + ++
Sbjct: 195 VFFDFDKADLLPEARGIIASALKAITAEPQGMIKVTGYTDTSGTPSYNDKLSARRGNAVE 254
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ G + ISV V N+R I++ +
Sbjct: 255 Q-ALLHGGIAADRISVDSRGESDLFVQTPDGVREPQNRRATIELMGK 300
>gi|170723854|ref|YP_001751542.1| flagellar motor protein MotB [Pseudomonas putida W619]
gi|169761857|gb|ACA75173.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 339
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 53/143 (37%), Gaps = 9/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + Q +++ G I + + + L+ F +L +A +
Sbjct: 134 EENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFEDILLAMADTIKAV 193
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I++ HTD+ N +S RA+ + L+ G ++ V G+A
Sbjct: 194 PN-KISVSGHTDAKPYSGSSEFGNWELSANRANAARRALVAGGYPDDQVARVVGYASSS- 251
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
+ N+RI+I + +
Sbjct: 252 LFDRKDPFN-PVNRRIDIIVLTK 273
>gi|117619103|ref|YP_858241.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560510|gb|ABK37458.1| outer membrane protein P5 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 352
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ L + + + + V + +TD IG+ N +S++RA
Sbjct: 230 SDVLFDFNKATLKPAAGQALDNLYSQIEQARPKDGVATVIGYTDRIGSDAYNQKLSEQRA 289
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKV------GRQNNQRIEIQI 182
+ YL+ + ++V G P+ D+ +K ++R+E+++
Sbjct: 290 RTVADYLVGK-GLPAGKVNVEGRGKGNPVTGDSCTSKSKKELIVCLAPDRRVEVKV 344
>gi|114775594|ref|ZP_01451162.1| hypothetical protein SPV1_04678 [Mariprofundus ferrooxydans PV-1]
gi|114553705|gb|EAU56086.1| hypothetical protein SPV1_04678 [Mariprofundus ferrooxydans PV-1]
Length = 198
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 64/202 (31%), Gaps = 31/202 (15%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE--------DE 53
++ + + ISGC + ++ S+ V + + E
Sbjct: 1 MRWILPLILGTALISGCATDTPYPQQNKADASSKPVAVYGIAQETANGKERFVWCGACPS 60
Query: 54 FQMQLQDTGI------VVSRIGDMITCY---IPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ +TG R + + + + ++ L + +
Sbjct: 61 LTPKTAETGESPHKEPTPPRKANAVVKQWKPAAIIHFDFNSATIKPNEKTKLAGLFKDIG 120
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY----K 160
+ T I ++ +TD+ G + N ++ RA ++ + + +R F +
Sbjct: 121 RN--TTIILRGYTDAAGGMAYNQHLAWRRAQAVRR-WLSEHLERQPGYEIRAFGKCCYAR 177
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
P R N+R+EI I
Sbjct: 178 QP-------GLRPENRRVEIYI 192
>gi|332885102|gb|EGK05354.1| hypothetical protein HMPREF9456_02853 [Dysgonomonas mossii DSM
22836]
Length = 401
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 6/122 (4%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V + + + + L IA ILN + I +TD+ G+ +
Sbjct: 269 VETPSTELCELFNNIYFEFDKSDIRPESNETLDKIANILNNNTAKKYLITGYTDARGSAE 328
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY---KYPIDTNDTKVGRQNNQRIEIQ 181
N+ +S+ RA + ++ + RG P+ ++ + R+ ++++ ++
Sbjct: 329 YNIGLSRRRAASVIK-ALEDRGVPTDILKSRGVGKKISYAPVS--ESHIVREGDRKVTVE 385
Query: 182 IF 183
I
Sbjct: 386 II 387
>gi|15965621|ref|NP_385974.1| hypothetical protein SMc00141 [Sinorhizobium meliloti 1021]
gi|15074802|emb|CAC46447.1| Hypothetical protein SMc00141 [Sinorhizobium meliloti 1021]
Length = 671
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLL 128
+ + ++ +A +NK P I+ HTD++G ++NL+
Sbjct: 549 RIDLDTITFATGSAEVSMSQAKTMRNVAEAMNKVLEKDPGETFFIEGHTDAVGADQSNLV 608
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
+S ERA+ + L + + +G+ ++ D Q N+R+ I ++ P
Sbjct: 609 LSDERAESVAVLLTEVYGIPAENLVTQGYGERFLKIRTDGPE--QENRRVTIRRVTP 663
>gi|238785460|ref|ZP_04629444.1| hypothetical protein yberc0001_17840 [Yersinia bercovieri ATCC
43970]
gi|238713615|gb|EEQ05643.1| hypothetical protein yberc0001_17840 [Yersinia bercovieri ATCC
43970]
Length = 380
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 8/122 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
I + + +E +L+ IA ILN P+ I++ HTD + +
Sbjct: 116 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPN-KISLSGHTDDLPYANGERGYS 174
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + V G A + + N+RI I + +
Sbjct: 175 NWELSADRANASRRELLIGGLDEGKVLRVVGMASTMRLKEQASDD--PVNRRISILVLNK 232
Query: 186 GN 187
Sbjct: 233 QT 234
>gi|220921338|ref|YP_002496639.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219945944|gb|ACL56336.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
Length = 222
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 52/147 (35%), Gaps = 5/147 (3%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ V LD + + + + + D + + + + K L
Sbjct: 65 GEAGSVAGDDRGFLDSLRNRTSLTPSERSKLAAASADKPSIDL-EIPFDYNSSKIGPKAL 123
Query: 94 PMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
P+++ + L + I HTD G + N +S+ RA+ +K Y++Q
Sbjct: 124 PVVKSLGAALARPELKGNTFLIVGHTDGKGKDQINQTLSERRAEAVKQYIVQNYGVPASN 183
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ G+ DT + N+R+
Sbjct: 184 LVSVGYGKSQLKDTANPLS--AVNRRV 208
>gi|257094100|ref|YP_003167741.1| flagellar motor protein MotB [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046624|gb|ACV35812.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 319
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 50/143 (34%), Gaps = 8/143 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNK- 105
++ + I ++ G I + + S L+ +L+ I LN
Sbjct: 141 ESNPALKQFKSQLLIDITSEGLRIQIVDEQNRPMFDTSSAELKPHTRVILREIGKALNAV 200
Query: 106 FPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
++ + G N +S RA+ + LI G+ ++ + V G A
Sbjct: 201 HNKLSLSGHTDAAQYGGGDKGFSNWELSANRANASRRELIAGGMDEHKVLRVVGLASTVL 260
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
D ND N+RI I + +
Sbjct: 261 FDKNDPLS--SINRRISIVVLNK 281
>gi|170741247|ref|YP_001769902.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
gi|168195521|gb|ACA17468.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
Length = 277
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 51/155 (32%), Gaps = 15/155 (9%)
Query: 41 KRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKF 92
FG ++ Q +++ + + + +
Sbjct: 113 DGFGLAMASLRQALQDLPDIAELSKNVLIHETARGLDVSLVDQDGRSMFPDGSTRPNDRT 172
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSS 148
+L+ +A + + + IAI +T + +S RA ++ L GV
Sbjct: 173 RQVLERLAPAIRRMSN-KIAISGYTAATRPGLRAPAPPWELSAGRAISVREILASNGVPD 231
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RF V G A P+ ++ + N+R+ I +
Sbjct: 232 ERFTVVSGKADTEPLFPDNPYI--AANRRVTITLL 264
>gi|170769416|ref|ZP_02903869.1| chemotaxis protein MotB [Escherichia albertii TW07627]
gi|170121740|gb|EDS90671.1| chemotaxis protein MotB [Escherichia albertii TW07627]
Length = 308
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 56/148 (37%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLLQEGLRIQIIDSQNRPMFKIGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S ERA+ + L G+ + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYANGEKGYSNWELSTERANASRRELAAGGLDDGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AINRRISLLVLNKQAEQ 271
>gi|126666113|ref|ZP_01737093.1| OmpA/MotB [Marinobacter sp. ELB17]
gi|126629435|gb|EBA00053.1| OmpA/MotB [Marinobacter sp. ELB17]
Length = 110
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 99 IATILNKFPSTVIAIQSHTDSIGT-------LKNNLLISQERADVIKSYLIQRGVSSNRF 151
+A L FP +I+IQ H+DS N +S RA L + G+ +R
Sbjct: 2 LADALKSFPDHLISIQGHSDSRSIAPALQSLYPTNWELSASRAASAVRVLREAGIDPSRM 61
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+V GFA P+ V R+ N+RIE+ ++P
Sbjct: 62 QAV-GFADARPLVKEIDTVSRRKNRRIEVLLYP 93
>gi|163743880|ref|ZP_02151251.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
gi|161382821|gb|EDQ07219.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
Length = 518
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 13/150 (8%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIG--------DMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
S++ D + G V D + + + +
Sbjct: 368 SMNVQGDRLANAITAAGSEVPLEELQRLVSRLDGLQRLTTSFRFEPGSTRPDAQSRSNIT 427
Query: 98 LIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI---QRGVSSNRFI 152
+A L + + + +D G N I+++RA+ ++ +I + I
Sbjct: 428 QLARSLEAGAYDARELVFVGFSDGDGPASGNRSIAKKRAEAVRDAVIAAAETANLERTEI 487
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ F P+ D + GRQ N+R+E+ +
Sbjct: 488 EIAAFGEALPMACEDQRWGRQVNRRVEVWV 517
>gi|218531252|ref|YP_002422068.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
gi|218523555|gb|ACK84140.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
Length = 296
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/244 (16%), Positives = 80/244 (32%), Gaps = 68/244 (27%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHK-----------SNDTDIVNKRFGSSLDKAEDE 53
L + + ++ + ++ + V L + + + +++ D+ E
Sbjct: 29 LFIVIILLAFFA---SQLKDDQTVPLPEYRQIERERDRLATENADLSREVARLEDELRKE 85
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHV-------------------------SFVSEVFL 88
+LQ VS D I + + L
Sbjct: 86 RTNRLQTYLSAVSSERDRILRTLRDRLVVDFPELENIVSIETGALRFKGDGLFKTDRWQL 145
Query: 89 EKKFLPMLQLIATILNKF-PSTV--------------------IAIQSHTDSIGTLKNNL 127
+ ++ IAT LN+ P + I+ HTD+ G ++N
Sbjct: 146 AEDKRRVVTAIATRLNELLPCYTFGKAARWQASCNAAGAVIEAVQIEGHTDASGQDRSNF 205
Query: 128 LISQERADVIKSYLI--------QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+S ERA +I R + +SV G+ P+ N ++ GR N+RI+
Sbjct: 206 SLSTERAVETLFAMIGREPALLDNRNSAGQPVLSVSGYGRLRPVADNTSERGRATNRRID 265
Query: 180 IQIF 183
++I
Sbjct: 266 LRII 269
>gi|162420339|ref|YP_001607210.1| flagellar motor protein MotB [Yersinia pestis Angola]
gi|162353154|gb|ABX87102.1| chemotaxis MotB protein [Yersinia pestis Angola]
Length = 421
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
I + + +E +L+ IA ILN P+ +++ HTD + + +
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPN-KLSLSGHTDDLPYARGERGYS 208
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + V G A + + N+RI I + +
Sbjct: 209 NWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNK 266
Query: 186 GN 187
+
Sbjct: 267 QS 268
>gi|27378912|ref|NP_770441.1| chemotaxis protein [Bradyrhizobium japonicum USDA 110]
gi|27352062|dbj|BAC49066.1| pomB [Bradyrhizobium japonicum USDA 110]
Length = 276
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 55/171 (32%), Gaps = 9/171 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI-TCYIPVHV 80
R++ K + + + E + ++ G +
Sbjct: 100 DRDRTSGAKIKVDRNFALAAASLRQALQDMPELTEMSKHIMFEETKQGLNLEIVDQDGRS 159
Query: 81 SFVSEVFLEKK-FLPMLQLIATILNKFPSTVIAIQSH----TDSIGTLKNNLLISQERAD 135
F + +++ +A L P ++I H + +S +RA+
Sbjct: 160 MFADGSKVPYDRTRRLVEKLAIPLKATP-LRVSIAGHTAAGFVPTRSDYGAFDLSADRAN 218
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
++ L + G+ ++ +V G A P+ +D N+R+ I +
Sbjct: 219 AVRQILEREGLPASHIFAVSGKADTQPLFPDDP--SLAANRRVTITLMRED 267
>gi|311280760|ref|YP_003942991.1| SmpA/OmlA domain-containing protein [Enterobacter cloacae SCF1]
gi|308749955|gb|ADO49707.1| SmpA/OmlA domain-containing protein [Enterobacter cloacae SCF1]
Length = 265
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 9/114 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L + L+ + + + P + I H D IG + N +S RA+
Sbjct: 152 ESLFGFGSATLSRTGETELRRMIAQIQEQHIPVKRVLITGHADRIGNSEKNNALSLARAE 211
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK------VGRQNNQRIEIQIF 183
+ L+ + RG P+ + + N+RI I I
Sbjct: 212 AV-KTLLVAQGIPEALVETRGVGASQPLVVCPGETTPAVVACLEKNRRITINIL 264
>gi|315179650|gb|ADT86564.1| lateral flagellar motor protein B [Vibrio furnissii NCTC 11218]
Length = 330
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 12/145 (8%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLPMLQLIATIL 103
E + + VS + + L F +L +A +
Sbjct: 134 KVIEAMMRQISAQGNVHVSVTPQGLRIVLQDDYKQHMFSRGGTELTPFFEDLLLALAPVF 193
Query: 104 NKFPSTVIAIQSHTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ + +I I HTDS + N +S RA++ + L+ G+ R + V G +
Sbjct: 194 QRVENPLI-ISGHTDSTAFKQRFSHRTNWELSANRANIARQTLVAGGMPEQRVLQVTGMS 252
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + N + N+RIE+ +
Sbjct: 253 DRALL--NPDEPDGSENRRIELFVL 275
>gi|260767946|ref|ZP_05876880.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
gi|260615976|gb|EEX41161.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
Length = 330
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 12/145 (8%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLPMLQLIATIL 103
E + + VS + + L F +L +A +
Sbjct: 134 KVIEAMMRQISAQGNVHVSVTPQGLRIVLQDDYKQHMFSRGGTELTPFFEDLLLALAPVF 193
Query: 104 NKFPSTVIAIQSHTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ + +I I HTDS + N +S RA++ + L+ G+ R + V G +
Sbjct: 194 QRVENPLI-ISGHTDSTAFKRRFSHRTNWELSANRANIARQTLVAGGMPEQRVLQVTGMS 252
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + N + N+RIE+ +
Sbjct: 253 DRALL--NPDEPDGSENRRIELFVL 275
>gi|163737938|ref|ZP_02145354.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
gi|161388554|gb|EDQ12907.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
Length = 518
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 13/150 (8%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIG--------DMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
S++ D + G V D + + + +
Sbjct: 368 SMNVQGDRLANAITAAGSEVPLEELQRLVSRLDGLQRLTTSFRFEPGSTRPDAQSRSNIT 427
Query: 98 LIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI---QRGVSSNRFI 152
+A L + + + +D G N I+++RA+ ++ +I + I
Sbjct: 428 QLARSLEAGAYDARELVFVGFSDGDGPASGNRSIAKKRAEAVRDAVIAAAETANLERTEI 487
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ F P+ D + GRQ N+R+E+ +
Sbjct: 488 EIAAFGEALPMACEDQRWGRQVNRRVEVWV 517
>gi|168234012|ref|ZP_02659070.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205331986|gb|EDZ18750.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 309
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 67/184 (36%), Gaps = 20/184 (10%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMI 72
+++ + N ++ + S L+K + ++ I + + G I
Sbjct: 92 TQQQGEVEKQPNIDELKKRMEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRI 151
Query: 73 TC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
+ +E +L+ IA +LN P+ I++ HTD +
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPN-RISLARHTDDFPYANGEKGYS 210
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + + V G A + N+RI + + +
Sbjct: 211 NWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNK 268
Query: 186 GNIK 189
+
Sbjct: 269 QAEQ 272
>gi|22125717|ref|NP_669140.1| flagellar motor protein MotB [Yersinia pestis KIM 10]
gi|108807851|ref|YP_651767.1| flagellar motor protein MotB [Yersinia pestis Antiqua]
gi|108812127|ref|YP_647894.1| flagellar motor protein MotB [Yersinia pestis Nepal516]
gi|149366375|ref|ZP_01888409.1| chemotaxis MotB protein [Yersinia pestis CA88-4125]
gi|165925475|ref|ZP_02221307.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165938485|ref|ZP_02227042.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|166008640|ref|ZP_02229538.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210582|ref|ZP_02236617.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401678|ref|ZP_02307169.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422628|ref|ZP_02314381.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426350|ref|ZP_02318103.1| chemotaxis MotB protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|218928797|ref|YP_002346672.1| flagellar motor protein MotB [Yersinia pestis CO92]
gi|229841656|ref|ZP_04461814.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229843773|ref|ZP_04463916.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229894516|ref|ZP_04509698.1| chemotaxis MotB protein [Yersinia pestis Pestoides A]
gi|229902447|ref|ZP_04517566.1| chemotaxis MotB protein [Yersinia pestis Nepal516]
gi|270490373|ref|ZP_06207447.1| flagellar motor protein MotB [Yersinia pestis KIM D27]
gi|294504144|ref|YP_003568206.1| flagellar motor protein [Yersinia pestis Z176003]
gi|21958635|gb|AAM85391.1|AE013785_4 lateral flagellar motor protein [Yersinia pestis KIM 10]
gi|108775775|gb|ABG18294.1| chemotaxis MotB protein [Yersinia pestis Nepal516]
gi|108779764|gb|ABG13822.1| chemotaxis MotB protein [Yersinia pestis Antiqua]
gi|115347408|emb|CAL20310.1| chemotaxis MotB protein [Yersinia pestis CO92]
gi|149290749|gb|EDM40824.1| chemotaxis MotB protein [Yersinia pestis CA88-4125]
gi|165913600|gb|EDR32220.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|165922584|gb|EDR39735.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165993022|gb|EDR45323.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207762|gb|EDR52242.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958475|gb|EDR55496.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048783|gb|EDR60191.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054705|gb|EDR64509.1| chemotaxis MotB protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229680493|gb|EEO76590.1| chemotaxis MotB protein [Yersinia pestis Nepal516]
gi|229689381|gb|EEO81444.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229694119|gb|EEO84167.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229703535|gb|EEO90552.1| chemotaxis MotB protein [Yersinia pestis Pestoides A]
gi|262366194|gb|ACY62751.1| flagellar motor protein [Yersinia pestis D182038]
gi|270338877|gb|EFA49654.1| flagellar motor protein MotB [Yersinia pestis KIM D27]
gi|294354603|gb|ADE64944.1| flagellar motor protein [Yersinia pestis Z176003]
Length = 427
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
I + + +E +L+ IA ILN P+ +++ HTD + + +
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPN-KLSLSGHTDDLPYARGERGYS 208
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + V G A + + N+RI I + +
Sbjct: 209 NWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNK 266
Query: 186 GN 187
+
Sbjct: 267 QS 268
>gi|327482425|gb|AEA85735.1| flagellar motor protein MotB [Pseudomonas stutzeri DSM 4166]
Length = 337
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 58/155 (37%), Gaps = 10/155 (6%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLP 94
D+V + + +D+ E Q +++ G I + + + L+ F
Sbjct: 121 DLVLQELQNKVDE-NPELQKFKDQILFEITQDGLRIQIMDAENRPMFALGSAQLQPYFED 179
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNR 150
+L + + P+ I+I HTD+ N +S RA+ + L+ G +
Sbjct: 180 ILLALVETIAAVPN-KISISGHTDAKPFSGRGDFGNWELSASRANAARRTLVYGGYPEEQ 238
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
V G+A + N+RI+I + +
Sbjct: 239 IARVVGYASSA-LFDRKDPFN-PVNRRIDILVLTK 271
>gi|313500883|gb|ADR62249.1| MotB [Pseudomonas putida BIRD-1]
Length = 346
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 9/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + Q +++ G I + + + L+ F +L +A +
Sbjct: 134 EENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFEDILLAMADTIKAV 193
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I+I HTD+ N +S RA+ + L+ G + V G+A
Sbjct: 194 PN-KISISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQVARVVGYASSS- 251
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
+ N+RI+I + +
Sbjct: 252 LFDRKDPFN-PVNRRIDIIVLTK 273
>gi|269123085|ref|YP_003305662.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
12112]
gi|268314411|gb|ACZ00785.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
Length = 2075
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 87 FLEKKFLPMLQLIATILNKF-PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L K ML+ I LN+ + I I +TD++ NL + +RA+V+ L + G
Sbjct: 1977 ELTKSQEEMLKNIVRELNENYKNRKIYITGYTDNVSGENLNLELGLKRANVVAKKLRELG 2036
Query: 146 VSSNRFIS-VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + I V Y ++TN + GR +N+R+EI++
Sbjct: 2037 LDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVEIEL 2074
>gi|51596729|ref|YP_070920.1| flagellar motor protein MotB [Yersinia pseudotuberculosis IP 32953]
gi|186895791|ref|YP_001872903.1| flagellar motor protein MotB [Yersinia pseudotuberculosis PB1/+]
gi|51590011|emb|CAH21644.1| chemotaxis MotB protein [Yersinia pseudotuberculosis IP 32953]
gi|186698817|gb|ACC89446.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 439
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
I + + +E +L+ IA ILN P+ +++ HTD + + +
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPN-KLSLSGHTDDLPYARGERGYS 208
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + V G A + + N+RI I + +
Sbjct: 209 NWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNK 266
Query: 186 GN 187
+
Sbjct: 267 QS 268
>gi|153950639|ref|YP_001400614.1| flagellar motor protein MotB [Yersinia pseudotuberculosis IP 31758]
gi|152962134|gb|ABS49595.1| chemotaxis MotB protein [Yersinia pseudotuberculosis IP 31758]
Length = 433
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
I + + +E +L+ IA ILN P+ +++ HTD + + +
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPN-KLSLSGHTDDLPYARGERGYS 208
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + V G A + + N+RI I + +
Sbjct: 209 NWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNK 266
Query: 186 GN 187
+
Sbjct: 267 QS 268
>gi|254966498|gb|ACT97225.1| TraQ [Synthetic plasmid pMOL98]
Length = 186
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 67/197 (34%), Gaps = 24/197 (12%)
Query: 2 IKELGLSMFIMTTISGCGLASR------------EKKKVFLHKSNDTDIVNKRFGSSLDK 49
+++L + + + ++ C + + + + +++
Sbjct: 1 MRKL-VVLSSILALAACSSPPKPPVVDGSNRHAVNTPETAEVIALRAQLAQSEEKLRVEQ 59
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
A + + + P + +F + LP+L +
Sbjct: 60 ARPVISPAVLQPAPPPPARSRTFSVHFPYNNTNFHLSADDSAQLLPLLAK---------A 110
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I ++ TD + I+ RA + +LI + S ISV + + N +
Sbjct: 111 RRIEVRGRTDGQRPSTADEKIALNRALAAQRFLIGQ-GVSPAIISVNYVSAGDYVADNFS 169
Query: 169 KVGRQNNQRIEIQIFPR 185
VGR N+R++I++F +
Sbjct: 170 AVGRSLNRRVDIEVFNQ 186
>gi|75676986|ref|YP_319407.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
gi|74421856|gb|ABA06055.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
Length = 663
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + LQ+IA +N+ P V I+ HTD++G +NL +
Sbjct: 535 IDLDTINFETGSWDISDDQAAKLQVIADGINRVVARNPGEVFLIEGHTDAVGNDVDNLSL 594
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA L Q+ + +G+ + D + N+R+ + +I P
Sbjct: 595 SDRRAQSAAELLTQQFQVPPENLVTQGYGEQNLKIQTDGPS--RENRRVTVRRITP 648
>gi|118577387|ref|YP_899627.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118504892|gb|ABL01374.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 191
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 69/205 (33%), Gaps = 44/205 (21%)
Query: 2 IKELGLSMFIMTT------ISGCG-------------LASREKKKVFLHKSNDTDIVNKR 42
+K+ ++M ++ +S A VF+ + D
Sbjct: 1 MKKTLITMAVVLVAQASPALSATELIKEHDYIYNYDEEAKSMNDDVFVVCGDCKDSQLNP 60
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIAT 101
+ + + Q+ + T + V+F + L K L +
Sbjct: 61 IYNVTVRYSTNTEDQISAGDVKPQNEDKTKTPSLLGVVNFTFDSHRLSKASKSQLNTL-- 118
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK- 160
F + I I T +IG K NL +S++RA + YLI +GVS + + GF
Sbjct: 119 ---DFKNKKIVIDGFTCTIGRSKYNLSLSKKRARTVADYLISKGVS---VLKISGFGESG 172
Query: 161 ----YPIDTNDTKVGRQNNQRIEIQ 181
P+ N+R+EI
Sbjct: 173 KYKKKPL-----------NRRVEIW 186
>gi|322433005|ref|YP_004210254.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
gi|321165232|gb|ADW70936.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
Length = 309
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 61/142 (42%), Gaps = 12/142 (8%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
SL++ + + +M + + G+ + + D +L++++ L
Sbjct: 105 DSLNRLKKQIEMTVTEEGLRIELVED-----AKGTFFETGSSKPTPALEEILKVLSEQLK 159
Query: 105 KFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
P+ I+I+ HTD+ N +S +RA+V + + + G+ +++ VRGFA +
Sbjct: 160 SLPN-SISIEGHTDAQPYATATVYGNWELSTDRANVARREMQENGIRTDQVSQVRGFADQ 218
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
+N+RI + +
Sbjct: 219 RLHVPEKPLD--ASNRRISLVV 238
>gi|45441604|ref|NP_993143.1| flagellar motor protein MotB [Yersinia pestis biovar Microtus str.
91001]
gi|145599064|ref|YP_001163140.1| flagellar motor protein MotB [Yersinia pestis Pestoides F]
gi|45436465|gb|AAS62020.1| chemotaxis MotB protein [Yersinia pestis biovar Microtus str.
91001]
gi|145210760|gb|ABP40167.1| chemotaxis MotB protein [Yersinia pestis Pestoides F]
gi|320014810|gb|ADV98381.1| chemotaxis MotB protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 433
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
I + + +E +L+ IA ILN P+ +++ HTD + + +
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPN-KLSLSGHTDDLPYARGERGYS 208
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + V G A + + N+RI I + +
Sbjct: 209 NWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNK 266
Query: 186 GN 187
+
Sbjct: 267 QS 268
>gi|88859106|ref|ZP_01133747.1| putative assembly or transport protein for curli synthesis
[Pseudoalteromonas tunicata D2]
gi|88819332|gb|EAR29146.1| putative assembly or transport protein for curli synthesis
[Pseudoalteromonas tunicata D2]
Length = 417
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 1/103 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
LE + L I +++ I +Q D G + N +S R+ +
Sbjct: 311 FRTGSAQLEPVYSEQLNSIVSLVKSTDYLAIELQGFADQRGLEQENRSLSLARSHSVAQ- 369
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + ISV G + + G ++R+ +++
Sbjct: 370 YLNNQGIVQQRISVAGLGDEQAVYQVTDPEGLFFDRRVIVKLI 412
>gi|23012822|ref|ZP_00052818.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 278
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 3/103 (2%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++ L K+ L+ + + + I + HTD++G N +S+ RA ++
Sbjct: 176 VYFDFNKSTLTKEAQKTLKEVVASAGQIKPSSIYVAGHTDTVGKAGYNDKLSKARAAAVE 235
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L + GV + I + F + N+R+EI
Sbjct: 236 KQLAKLGV---KSIDAKAFGFAKLAVPTKANTKEAKNRRVEIY 275
>gi|325271245|ref|ZP_08137790.1| flagellar motor protein MotB [Pseudomonas sp. TJI-51]
gi|324103648|gb|EGC00950.1| flagellar motor protein MotB [Pseudomonas sp. TJI-51]
Length = 340
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 9/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + Q +++ G I + + + L+ F +L +A +
Sbjct: 134 EENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFEDILLAMADTIKAV 193
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I+I HTD+ N +S RA+ + L+ G + V G+A
Sbjct: 194 PN-KISISGHTDAKPYAGTGEFGNWELSANRANAARRALVAGGYPDGQVARVVGYASSS- 251
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
+ N+RI+I + +
Sbjct: 252 LFDRKNPFN-PVNRRIDIIVLTK 273
>gi|307726280|ref|YP_003909493.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307586805|gb|ADN60202.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 330
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 61/177 (34%), Gaps = 10/177 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
K SL + + I ++ G I +
Sbjct: 119 ATPVNVVPTVAPADAARLQQLKEKLVSLIEQSPALKAFKDQIRISITNEGLRIEIVDSQN 178
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-----KNNLLISQE 132
+ L+ + +L I LN + I+I HTD++ +N +S E
Sbjct: 179 RPMFASGSPRLQTYAVAILTQIGAALNDVEN-RISIAGHTDAVPYTGGPVGYSNWELSSE 237
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
RA+ + L+ G+ + + VRG A P+++N N+RI I + + +
Sbjct: 238 RANAARRALVAGGMHGEKLLQVRGLADVLPLNSNVVDE--PTNRRISILVMNKAAEQ 292
>gi|46202758|ref|ZP_00052660.2| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 382
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L + L L+ A + + ++++ +TD++G NL +S++RAD + +
Sbjct: 152 FDLGSAKLSPQALQTLKEAAAAQAQMHAPLVSVAGYTDTLGAADANLRLSRQRADAVTAE 211
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + + IS N+R+EI +
Sbjct: 212 LV-KLGVNPAIISENALGETKLAVATGDNKAEAKNRRVEITL 252
>gi|219853797|ref|YP_002470919.1| hypothetical protein CKR_0454 [Clostridium kluyveri NBRC 12016]
gi|219567521|dbj|BAH05505.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 248
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 65/159 (40%), Gaps = 20/159 (12%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATI---LNKFP 107
++ + Q+ G+ ++ + V F ++ + +F L + P
Sbjct: 83 EDIRKSFQNAGLDINIDKNTGDIVFSSDVLFEFNKADIRPEFKSNLDKFIPQYVNVLTSP 142
Query: 108 ST-----VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS---------NRFIS 153
I I+ HTD+IG N+ +SQ+RA+ I +Y++ + I+
Sbjct: 143 KYISSVSEIVIEGHTDNIGDYNYNMDLSQKRANSIVNYILNNNFKNLDSYSKENLKNIIT 202
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRI--EIQIFPRGNIKK 190
G + I +D V ++ ++R+ + ++ +IK+
Sbjct: 203 ANGRSKSQLIKNSDGSVNQEKSRRVIFKFRLKDEESIKQ 241
>gi|83955101|ref|ZP_00963757.1| chemotaxis MotB protein [Sulfitobacter sp. NAS-14.1]
gi|83840430|gb|EAP79603.1| chemotaxis MotB protein [Sulfitobacter sp. NAS-14.1]
Length = 394
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 60/180 (33%), Gaps = 19/180 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRIGD 70
+ D V+ K E + +Q+ ++ + +
Sbjct: 143 SASQTASDGSKSAGDATIDNVHALDNEKFKKLEQDILQAMQENPDLDPLKKNLIFQQTPE 202
Query: 71 MITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT----DSIGT 122
+ I + + ++ +L + L + P+ I + HT +
Sbjct: 203 GLQIQIIDQEGQPMFYSGRAEMQGATDQLLANLGKSLARLPN-KITLSGHTDAVRFANSQ 261
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S +RA+ + GV+ +R I V G A P+ + +N+RI + +
Sbjct: 262 KYDNWDLSSDRANATRRVFEASGVARDRIIRVSGLADTAPLVPENPTD--ASNRRITVSV 319
>gi|260466608|ref|ZP_05812796.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
gi|259029614|gb|EEW30902.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
Length = 466
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 10/128 (7%)
Query: 61 TGIVVSRIGDMITCYIPVHVSF----VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G+ V + I + F V ++ + ++ I I+N T I+I H
Sbjct: 337 DGVSVEATDKGVVISITDRLDFGMFEVGSALPSRELVLAMEKIGRIVNSQKGT-ISINGH 395
Query: 117 TDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
TD+ + N +S RA L++ GV R V GFA + P D D
Sbjct: 396 TDARPFRSDSYDNWRLSTARAHSAYYMLVRGGVDERRITEVAGFADRQPKDPADPMA--A 453
Query: 174 NNQRIEIQ 181
N+RIEI
Sbjct: 454 VNRRIEIL 461
>gi|186896751|ref|YP_001873863.1| hypothetical protein YPTS_3453 [Yersinia pseudotuberculosis PB1/+]
gi|186699777|gb|ACC90406.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 303
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 47/130 (36%), Gaps = 9/130 (6%)
Query: 62 GIVVSRIGDMITCYIPV--HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V G I + S L F +L +A N+ I I HTD+
Sbjct: 150 QMEVVPQGLRILIQDDQQRDMFQRSSAVLTPFFSRLLGELAPAFNEM-DNKIIITGHTDA 208
Query: 120 IGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
N +S ERA + L+ G+ R + + A + +D D N
Sbjct: 209 SRYRDQLLYNNWNLSGERALMAHKALVNGGLDEGRVLQINTMADQMLLDPTDPLA--AKN 266
Query: 176 QRIEIQIFPR 185
+RIEI + +
Sbjct: 267 RRIEIMVLTK 276
>gi|149191181|ref|ZP_01869439.1| chemotaxis LafU protein [Vibrio shilonii AK1]
gi|148835019|gb|EDL51998.1| chemotaxis LafU protein [Vibrio shilonii AK1]
Length = 322
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 14/153 (9%)
Query: 42 RFGSSLDKAEDEFQMQLQD----TGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFL 93
L+ + +L + V + I + F + +
Sbjct: 111 NSQQELEVLAQRVKQELSGIDALGSVSVFVTPQGVKLVIADSDKGPMFFRGGAKVTPFYQ 170
Query: 94 PMLQLIATILNKFPSTVIAIQSHT---DSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+L +A +L K + +I I HT G+ N +S RA+ + YL + G+
Sbjct: 171 DLLLNLAGLLEKIENKMI-ITGHTDASRYKGSRMTNWELSSNRANSARYYLDKGGLQERH 229
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
V G + PID N+ K G N+RIE+ I
Sbjct: 230 IFQVTGMSDTAPIDFNNAKSG--INRRIELYIL 260
>gi|83312347|ref|YP_422611.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
gi|82947188|dbj|BAE52052.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
Length = 410
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 58/146 (39%), Gaps = 2/146 (1%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + +S KA + + V+ + + V+ + L + L L
Sbjct: 136 EQAAEGYAASPCKATFLAHEPILKKAVGVTEVAADVRRSFMVN-FDLGSAKLSPQALQTL 194
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ A + + ++++ +TD++G+ NL +S++RAD + + + + + I+
Sbjct: 195 KEAAAAQAQMYAPLVSVAGYTDTLGSADANLRLSRQRADAVTAE-LTKLGVNPAIIAENA 253
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
N+R+EI +
Sbjct: 254 LGESSLAVATGDNKAEAKNRRVEITL 279
>gi|121604226|ref|YP_981555.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans
CJ2]
gi|120593195|gb|ABM36634.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2]
Length = 376
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 8/96 (8%)
Query: 93 LPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
P L IA L + I +TD IG+ + N +S+ RA + +
Sbjct: 273 QPRLDEIAAALGSHGEVNEVVITGYTDRIGSSQYNQKLSERRALAV-KTYLTGKGIDANR 331
Query: 152 ISVRGFAYKYPIDTNDTK------VGRQNNQRIEIQ 181
+ +G P+ K + N+R+E++
Sbjct: 332 LKAQGKGEADPVVACTDKKLPALIKCLEPNRRVEVE 367
>gi|254975524|ref|ZP_05271996.1| hypothetical protein CdifQC_09444 [Clostridium difficile QCD-66c26]
gi|255092912|ref|ZP_05322390.1| hypothetical protein CdifC_09699 [Clostridium difficile CIP 107932]
gi|255314653|ref|ZP_05356236.1| hypothetical protein CdifQCD-7_09900 [Clostridium difficile
QCD-76w55]
gi|255517327|ref|ZP_05385003.1| hypothetical protein CdifQCD-_09486 [Clostridium difficile
QCD-97b34]
gi|255650433|ref|ZP_05397335.1| hypothetical protein CdifQCD_09639 [Clostridium difficile
QCD-37x79]
gi|260683545|ref|YP_003214830.1| hypothetical protein CD196_1809 [Clostridium difficile CD196]
gi|260687205|ref|YP_003218339.1| hypothetical protein CDR20291_1852 [Clostridium difficile R20291]
gi|306520411|ref|ZP_07406758.1| hypothetical protein CdifQ_11096 [Clostridium difficile QCD-32g58]
gi|260209708|emb|CBA63457.1| putative membrane protein [Clostridium difficile CD196]
gi|260213222|emb|CBE04721.1| putative membrane protein [Clostridium difficile R20291]
Length = 210
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 15/162 (9%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH-VSFVSEVFLEKKFL 93
I + + + I V + V L+ +
Sbjct: 40 SESISGSVEQDLAKNVNASVEETFKKSKIPVKVDKSNGQVTFGEKTMFDVDSDVLKPEAK 99
Query: 94 PMLQLIA-----TILNKFPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI---- 142
ML++ TI + I I+ HTD +G+ NL +SQ RA + +++
Sbjct: 100 EMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDVGSYIYNLDLSQRRAYSVAKFIVGDEI 159
Query: 143 ---QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + I G + I D V R ++R+E++
Sbjct: 160 GDYKYKDKVTKHIIAIGRSKAELIKNGDNSVNRDASRRVELK 201
>gi|238758125|ref|ZP_04619305.1| hypothetical protein yaldo0001_12650 [Yersinia aldovae ATCC 35236]
gi|238703663|gb|EEP96200.1| hypothetical protein yaldo0001_12650 [Yersinia aldovae ATCC 35236]
Length = 364
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 72/203 (35%), Gaps = 31/203 (15%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKR-----------FGSSLDKAEDEFQMQLQDT 61
++ +S + + T + + L+K ++ ++
Sbjct: 35 VALTSGDKSSDSTSVIPGGGDDPTQQIGEVRKHIDSEESRKEEYRLNKLREKLDQLIESD 94
Query: 62 G--------IVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPST 109
++++ + + + I + + +E +L+ IA ILN P+
Sbjct: 95 PRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPN- 153
Query: 110 VIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I++ HTD + +N +S +RA+ + L+ G+ + + V G A +
Sbjct: 154 KISLSGHTDDLPYATGERGYSNWELSADRANASRRELLAGGLDDGKVLRVVGMASTMRLK 213
Query: 165 TNDTKVGRQNNQRIEIQIFPRGN 187
+ N+RI I + +
Sbjct: 214 EQTSDD--PVNRRISILVLNKQT 234
>gi|167466606|ref|ZP_02331310.1| flagellar motor protein MotB [Yersinia pestis FV-1]
Length = 427
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
I + + +E +L+ IA ILN P+ +++ HTD + + +
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPN-KLSLSGHTDDLPYARGERGYS 208
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + V G A + + N+RI I + +
Sbjct: 209 NWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNK 266
Query: 186 GN 187
+
Sbjct: 267 QS 268
>gi|148549982|ref|YP_001270084.1| flagellar motor protein MotB [Pseudomonas putida F1]
gi|148514040|gb|ABQ80900.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 346
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 9/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + Q +++ G I + + + L+ F +L +A +
Sbjct: 134 EENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFEDILLAMADTIKAV 193
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I+I HTD+ N +S RA+ + L+ G + V G+A
Sbjct: 194 PN-KISISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQVARVVGYASSS- 251
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
+ N+RI+I + +
Sbjct: 252 LFDRKDPFN-PVNRRIDIIVLTK 273
>gi|254439271|ref|ZP_05052765.1| hypothetical protein OA307_4141 [Octadecabacter antarcticus 307]
gi|198254717|gb|EDY79031.1| hypothetical protein OA307_4141 [Octadecabacter antarcticus 307]
Length = 514
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 49/161 (30%), Gaps = 13/161 (8%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI--------PVHVSFVSEV 86
+ L D + + G V +
Sbjct: 350 AGFVDLTAVPIPLSDQGDRLANAIVNAGSEVPLTELQRMMRLLSPRVRMSSTFRFEPGST 409
Query: 87 FLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIK---SYL 141
L+ + + +A + F + + +D G N +S RA+ ++ +
Sbjct: 410 RLDGQSRSNVMQLAQAIRDGRFGGRELMLVGFSDGRGLALANRDLSSARAEAVRLDLTRA 469
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ N I F P+ +DT G+Q N+R+E+ +
Sbjct: 470 LGGTFPENVEIDTAAFGEALPMACDDTIWGQQTNRRVELWV 510
>gi|209547941|ref|YP_002279858.1| flagellar motor protein MotB [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533697|gb|ACI53632.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 447
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 62/166 (37%), Gaps = 11/166 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
A+ +++ + +R G K + + + G++VS
Sbjct: 285 SAAETEQQQQKEAEQLQAQIAQRIGGIAGKLAEGLTVTASEGGLLVSISDQS-----DDS 339
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT---DSIGTLKNNLLISQERADV 136
+ + ++ + ++ I IL + +AI+ HT G N +S +RA
Sbjct: 340 MFDIGSAVPRQEMVLAMEKIGAILKERGGA-VAIRGHTDGRQYKGAQNENWRLSMDRAQS 398
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L++ G+ R V GFA + +D N+RIEI +
Sbjct: 399 AYYMLVRGGLDEKRISQVSGFADRRLKLPSDPF--NATNRRIEILV 442
>gi|332531608|ref|ZP_08407505.1| OmpA/MotB [Hylemonella gracilis ATCC 19624]
gi|332038971|gb|EGI75400.1| OmpA/MotB [Hylemonella gracilis ATCC 19624]
Length = 318
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 61/188 (32%), Gaps = 20/188 (10%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT--------GIVVSRIGDM 71
A + + +R L + + + I + D
Sbjct: 95 TAGQHPEDASAADKRRRAETARRDAQRLAALSAKISAAISNNAQLRRFSRQIQLESTPDG 154
Query: 72 ITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH-----TDSIGT 122
+ I + ++ +L+ I LN + I++ H + G
Sbjct: 155 LKIQIVDEQGRPMFTTGNAAVQPYMRDILREIGAALNGVEN-KISLDGHTDVTQYGNQGR 213
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S +RA+ + L+ G+ ++ + V G A + ++ N+RI I +
Sbjct: 214 SYSNWELSADRANAARRELVAAGMPEDKLLRVTGLAASNLLVPDNPTA--PANRRISIMV 271
Query: 183 FPRGNIKK 190
+ ++
Sbjct: 272 LTKEAEER 279
>gi|262362261|gb|ACY58982.1| chemotaxis MotB protein [Yersinia pestis D106004]
Length = 276
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
I + + +E +L+ IA ILN P+ +++ HTD + + +
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPN-KLSLSGHTDDLPYARGERGYS 208
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + V G A + + N+RI I + +
Sbjct: 209 NWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNK 266
>gi|153875680|ref|ZP_02003374.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152067857|gb|EDN66627.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 238
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 38/116 (32%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ L++ + L+ +A I I SHT+ S +R
Sbjct: 122 ITFRNLSFNSGKASLKRGAIYQLKEMAAAFKTIAPLKIKIHSHTNIQTFKGIEQEESSKR 181
Query: 134 ADVIKS-------YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ + R +I G Y P+ TK N+RIEI++
Sbjct: 182 NQILSEERADTIADTLARLGIDRDYIKTFGHGYSQPLTYELTKAALAKNKRIEIKV 237
>gi|163815615|ref|ZP_02206988.1| hypothetical protein COPEUT_01790 [Coprococcus eutactus ATCC 27759]
gi|158449252|gb|EDP26247.1| hypothetical protein COPEUT_01790 [Coprococcus eutactus ATCC 27759]
Length = 251
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 64/181 (35%), Gaps = 22/181 (12%)
Query: 22 SREKKKVFLHKSNDTDIVNK--RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+KK + + + + R + + + + V
Sbjct: 53 DEQKKIIADQEKMLGEQQKELDRIAGIRSDLVKALRDEFSGSSLNVKIDEKTGAITFDAG 112
Query: 80 VSFV-SEVFLEKKFLPMLQL---------IATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
V F S+ L++ + ++ + + I I+ HTD+ G+ NL +
Sbjct: 113 VLFDVSDSELKEDGKKFINQFLPKYCSVLLSDDYRDY-VSEIIIEGHTDTNGSYIYNLEL 171
Query: 130 SQERADVIKSYLIQ---------RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
SQ+RA + Y + + ++ G +Y PI +D +V ++R+EI
Sbjct: 172 SQQRAFSVARYCLTESNGIISSGQEEQLRTVLTANGKSYSNPIYGDDGEVDMDASRRVEI 231
Query: 181 Q 181
+
Sbjct: 232 K 232
>gi|153843472|ref|ZP_01993564.1| ATP-dependent protease La [Vibrio parahaemolyticus AQ3810]
gi|149745319|gb|EDM56570.1| ATP-dependent protease La [Vibrio parahaemolyticus AQ3810]
Length = 344
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNK 105
++ + + +++ I V +G I + +F FL+ KF P+++ IA ++
Sbjct: 17 MESIKKALEREIEQGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKD 76
Query: 106 FPSTVIAIQSHTDSI----GTLKNNLLISQERADVI-KSYLIQRGVSSNRFISVRGFAYK 160
P + I HTD+ ++N +S +RA + + I+ + I G +
Sbjct: 77 VPGI-VRISGHTDNQRLDSELYRSNWDLSSQRAVSVEFAMSIKEKGYNIYAIGQNGLGKR 135
Query: 161 YPIDTNDTKVGRQNNQ 176
T + R N+
Sbjct: 136 -------TMILRYLNR 144
>gi|316936147|ref|YP_004111129.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315603861|gb|ADU46396.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
Length = 216
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 52/147 (35%), Gaps = 7/147 (4%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
I K ++ + +++ I I + + ++ P +
Sbjct: 65 PIQAKFVDGLRNRPTRSLSSAERTQIAEITKDKPNIDLEIT---FEYNSANISRQAAPAV 121
Query: 97 QLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+ + L+ + HTDS+G N +S+ RAD IK L+++ + +
Sbjct: 122 EALGKALSSPDLKGATFVVAGHTDSVGGEGFNQELSERRADTIKRVLVEKYDIAGADLVT 181
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G+ D G N+R+++
Sbjct: 182 VGYGESRLKDPAHPDSG--VNRRVQVV 206
>gi|242279927|ref|YP_002992056.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242122821|gb|ACS80517.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 240
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 66/201 (32%), Gaps = 22/201 (10%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE------------- 51
L + MF++ + S+E KV + +++ ++
Sbjct: 35 LMMVMFVLFVVLFIYSQSKENIKVIFEGNAQSEVAMNPADGLIEMISFHRDAMSSSARVI 94
Query: 52 ---DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK-FLPMLQLIATILNKFP 107
++ + D + + + + + F + + L +A +L
Sbjct: 95 MTPEDVLYRSDDGAVSMKEEDGELKIVMRGNAFFAPGQNIFEDKTRQYLAEVAEVLKTSK 154
Query: 108 STVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
I I HTD+ +N+ +S RA + +LI I V G P
Sbjct: 155 HA-IHIIGHTDASDAAKVGAQNSFELSARRAAKVAEFLINTKSIDPVRIIVSGRGGVAPE 213
Query: 164 DTNDTKVGRQNNQRIEIQIFP 184
+D NN+R+EI +
Sbjct: 214 LPDDMGKVEGNNRRVEIVVIN 234
>gi|74311761|ref|YP_310180.1| flagellar motor protein MotB [Shigella sonnei Ss046]
gi|73855238|gb|AAZ87945.1| MotB [Shigella sonnei Ss046]
Length = 308
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 58/148 (39%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L++IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRVIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ S + + V G A
Sbjct: 187 PN-RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+RI + + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNKQAEQ 271
>gi|294508280|ref|YP_003572338.1| Motility protein B [Salinibacter ruber M8]
gi|294344608|emb|CBH25386.1| Motility protein B [Salinibacter ruber M8]
Length = 181
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 52/174 (29%), Gaps = 19/174 (10%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + GC ++ L D+ + +L + + L+
Sbjct: 2 RFLFGLLSAVVLVGCQQGNQGTGPQPLQGRIDSF---RTANQNLTRQVQALRDSLRAREA 58
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGT 122
+ P ++ + L A + ++P+ IQ +TD +
Sbjct: 59 GTTLQ--------PPIYFPSGSAWIPDRGRRRLDEHAATIKDEYPNAGFRIQGYTDPVPI 110
Query: 123 -------LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+N +S +RA + YL + + F + + ++T
Sbjct: 111 GPSLQDTYPSNWYLSAQRAAAVAHYLDTNHDIRTASLEIEAFGPRTMVGPDETP 164
>gi|205355449|ref|ZP_03222220.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205346683|gb|EDZ33315.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 317
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 16/153 (10%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ G + E Q +L + ++ + +P V F L+ + L+ I
Sbjct: 150 QNLGLIRENLSKELQSKLDNN---ITIDEKTGSISLPAEVLFDKDSYVLKNEAKTSLRKI 206
Query: 100 ----ATILNKFPST-----VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN- 149
+ + P I I+ HTDS G+ NL +SQ+RA + +++ S
Sbjct: 207 LSEYFDAILEDPKIFSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKL 266
Query: 150 -RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + G ++ P+ N + ++RIEI+
Sbjct: 267 QKLLMASGRSFSDPVFVNG-VEDKDKSRRIEIK 298
>gi|254428896|ref|ZP_05042603.1| OmpA family protein [Alcanivorax sp. DG881]
gi|196195065|gb|EDX90024.1| OmpA family protein [Alcanivorax sp. DG881]
Length = 208
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 49/144 (34%), Gaps = 2/144 (1%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKS-NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ ++ ++GC + E + + D + D+ + D +
Sbjct: 10 LSVVLVLAGCSSSVPETLTLERSQPFKLADADGDGVVDARDQCANSPAGVTADGQ-GCTE 68
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ + + ++ IA + P + +AI T GT++ N
Sbjct: 69 WEWKGYEQLYFVFFDFDKSLIRDDQQEVMDEIARDVLSSPDSQVAIVGDTSPEGTIQYNQ 128
Query: 128 LISQERADVIKSYLIQRGVSSNRF 151
+ + RA+ I L+ RGV +
Sbjct: 129 RLGERRAEAISGELLNRGVHGEQL 152
>gi|83815059|ref|YP_446342.1| OmpA domain-containing protein [Salinibacter ruber DSM 13855]
gi|83756453|gb|ABC44566.1| OmpA domain protein, putative [Salinibacter ruber DSM 13855]
Length = 208
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 52/174 (29%), Gaps = 19/174 (10%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ + GC ++ L D+ + +L + + L+
Sbjct: 29 RFLFGLLSAVVLVGCQQGNQGTGPQPLQGRIDSF---RTANQNLTRQVQALRDSLRAREA 85
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSIGT 122
+ P ++ + L A + ++P+ IQ +TD +
Sbjct: 86 GTTLQ--------PPIYFPSGSAWIPDRGRRRLDEHAATIKDEYPNAGFRIQGYTDPVPI 137
Query: 123 -------LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+N +S +RA + YL + + F + + ++T
Sbjct: 138 GPSLQDTYPSNWYLSAQRAAAVAHYLDTNHDIRTASLEIEAFGPRTMVGPDETP 191
>gi|317403796|gb|EFV84276.1| chemotaxis protein MotB [Achromobacter xylosoxidans C54]
Length = 329
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/186 (12%), Positives = 74/186 (39%), Gaps = 20/186 (10%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI----------VVSRIGDM 71
+ + ++ +R L+ + + ++++ + ++ G
Sbjct: 96 DERRAQGNRVEAQPKGDAERRDQHRLENLKKRLENVIENSPVLKSFRPQLLIDMTTEGLR 155
Query: 72 ITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK----- 124
I + + ++ +L+ + +LN+ P+ ++I HTD+ +
Sbjct: 156 IQIIDNQNRPMFATGRAEVQPYMRDILRELGPVLNELPN-KVSISGHTDASQYARGERAY 214
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+N +S +RA+ + L+ G++ ++ + ++G + + +D N+RI + +
Sbjct: 215 SNWELSADRANASRQELVAGGMNESKVMRIQGLSSSMSLVKDDPYA--AVNRRISLVVLN 272
Query: 185 RGNIKK 190
+ ++
Sbjct: 273 QSTQRR 278
>gi|167035946|ref|YP_001671177.1| flagellar motor protein MotB [Pseudomonas putida GB-1]
gi|166862434|gb|ABZ00842.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 350
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 12/176 (6%)
Query: 19 GLASREKKKV-FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
K +V + + + + + +K E+ Q+Q I+ D + I
Sbjct: 101 STTQLSKDQVETMAEQVERERLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIM 160
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLI 129
+ + L+ F +L +A + P+ I+I HTD+ N +
Sbjct: 161 DAENRPMFDIGSARLQPYFEDILLAMADTIKAVPN-KISISGHTDAKPYAGTGEFGNWEL 219
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
S RA+ + L+ G + V G+A + N+RI+I + +
Sbjct: 220 SANRANAARRALVAGGYPDGQVARVVGYASSS-LFDRKDPFN-PVNRRIDIIVLTK 273
>gi|260889796|ref|ZP_05901059.1| OmpA family protein [Leptotrichia hofstadii F0254]
gi|260860402|gb|EEX74902.1| OmpA family protein [Leptotrichia hofstadii F0254]
Length = 231
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEK----KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
D + + V++ + + + ++ + + + VI +
Sbjct: 93 DKDGKIVKMIIRGFPVNKEEVTEIEKREIKDEIEYLLNVFLENEEFVIVGYADETEKNKK 152
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +L +++ A+ +K +++ + ++ + G + + P+DTNDT++GR NN+R+EI +
Sbjct: 153 ELSLSRAEKMAEFLKQNGLRKDIKISK---ITGKSSENPVDTNDTEIGRYNNRRVEIFL- 208
Query: 184 PRGNIKK 190
G +KK
Sbjct: 209 KNGKVKK 215
>gi|73532502|dbj|BAE19809.1| chemotaxis protein [Edwardsiella tarda]
Length = 222
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
I + +E +L+ IA ILN+ P+ I++ HTD + +
Sbjct: 42 QIIDSQNRPMFQNGSAQVEPYMRNILRAIAPILNELPN-KISLSGHTDDLPYANGERGYS 100
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK---YPIDTNDTKVGRQNNQRIEIQI 182
N +S +RA+ + LI G++ N+ + V G A + N N+RI I +
Sbjct: 101 NWELSADRANASRRELIAGGLAGNKILRVVGMADTMNLRNLAGNA-----AVNRRISILV 155
Query: 183 FPRG 186
+
Sbjct: 156 LNKA 159
>gi|218699541|ref|YP_002407170.1| flagellar motor protein MotB [Escherichia coli IAI39]
gi|218369527|emb|CAR17296.1| protein that enables flagellar motor rotation [Escherichia coli
IAI39]
Length = 308
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 56/144 (38%), Gaps = 10/144 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 127 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 186
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G++ + + V G A
Sbjct: 187 PNC-ISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNGGKVLRVVGMAATM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
+ N+RI + + +
Sbjct: 246 RLSDRGPDD--AVNRRISLLVLNK 267
>gi|171059731|ref|YP_001792080.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170777176|gb|ACB35315.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 534
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 52/162 (32%), Gaps = 23/162 (14%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ +++ ++ D+A + F+ IV+
Sbjct: 373 GAVVATSEYARAGNDTSATFDEALERFRGYFTHEPIVI--------------YFDTGSDQ 418
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L I L+ +P + I D G+ + N +S +RA +++ ++ G++
Sbjct: 419 PMAGEEAKLDGIQEYLDNYPDATLGIDGFADIRGSEQFNFRLSDQRAQTVQALVLAEGIA 478
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQN---------NQRIEI 180
+ R G + T G N+R+ I
Sbjct: 479 AGRIDWAVGVGETQDFSQHGTAPGTAQPVDAGRLRANRRVVI 520
>gi|88597019|ref|ZP_01100255.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 84-25]
gi|218562250|ref|YP_002344029.1| putative OmpA family membrane protein [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|88190708|gb|EAQ94681.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112359956|emb|CAL34745.1| putative OmpA family membrane protein [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|284925860|gb|ADC28212.1| putative OmpA family membrane protein [Campylobacter jejuni subsp.
jejuni IA3902]
gi|315928819|gb|EFV08086.1| ompA family protein [Campylobacter jejuni subsp. jejuni 305]
Length = 317
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 63/153 (41%), Gaps = 16/153 (10%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ G + E Q +L + ++ + + +P V F L+ + L+ I
Sbjct: 150 QNLGLIRENLSKELQSKLDNN---ITIDEKIGSISLPAEVLFDKDSYVLKNEAKASLRKI 206
Query: 100 ----ATILNKFPST-----VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN- 149
+ + P I I+ HTDS G+ NL +SQ+RA + +++ S
Sbjct: 207 LSEYFDAILEDPKIFSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKL 266
Query: 150 -RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + G ++ P+ N + ++RIEI+
Sbjct: 267 QKLLMASGRSFSDPVFVNG-VEDKDKSRRIEIK 298
>gi|149370443|ref|ZP_01890132.1| OmpA domain protein [unidentified eubacterium SCB49]
gi|149355994|gb|EDM44551.1| OmpA domain protein [unidentified eubacterium SCB49]
Length = 432
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 61/169 (36%), Gaps = 5/169 (2%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
T+SG + ++ +I L+K + + G V+ + +
Sbjct: 268 TVSGVSVNTKGVAVDKNKNGIPDEIEGSLEARYLNKDDYKPSPNTVTNGSVIKDLLEKGY 327
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + EK L + + T L + PS + + D IG N +S++R
Sbjct: 328 VNV---YFKTNSSTPEKYSLEAVNYLKTYLIQNPSASAQLIGYADEIGNEAYNAQLSEKR 384
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A + ++ +S G +D N ++ RQ +R+ ++
Sbjct: 385 AKRVYD-ILVASGIDANRLSHTGNGEDTSVDKNSSEA-RQLVRRVTFKL 431
>gi|134280878|ref|ZP_01767588.1| chemotaxis LafU protein [Burkholderia pseudomallei 305]
gi|254182925|ref|ZP_04889518.1| lateral flagellar motor protein B [Burkholderia pseudomallei 1655]
gi|254299720|ref|ZP_04967169.1| lateral flagellar motor protein B [Burkholderia pseudomallei 406e]
gi|125657184|gb|ABN48672.1| chemotaxis LafU protein [Burkholderia pseudomallei]
gi|134247900|gb|EBA47984.1| chemotaxis LafU protein [Burkholderia pseudomallei 305]
gi|157809631|gb|EDO86801.1| lateral flagellar motor protein B [Burkholderia pseudomallei 406e]
gi|184213459|gb|EDU10502.1| lateral flagellar motor protein B [Burkholderia pseudomallei 1655]
Length = 311
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 10/132 (7%)
Query: 60 DTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI-- 113
D + + D + I + L F+ +L + +L + ++ +
Sbjct: 134 DGNVATAINDDGVRITIHDSDKQGMFERRSDALNPPFIRLLTALVPVLGTVTNKMVIVGH 193
Query: 114 --QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ NN +S RA + L G+ + R + G P ++
Sbjct: 194 TDATQYADASVFSNNWNLSSRRALRARQVLADGGMDAQRMFQISGMGDSVPAVPDNP--N 251
Query: 172 RQNNQRIEIQIF 183
N+R+E+ +
Sbjct: 252 HDMNRRVELLLL 263
>gi|170023989|ref|YP_001720494.1| flagellar motor protein MotB [Yersinia pseudotuberculosis YPIII]
gi|169750523|gb|ACA68041.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
Length = 451
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
I + + +E +L+ IA ILN P+ +++ HTD + + +
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPN-KLSLSGHTDDLPYARGERGYS 208
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + V G A + + N+RI I + +
Sbjct: 209 NWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNK 266
Query: 186 GN 187
+
Sbjct: 267 QS 268
>gi|26991582|ref|NP_747007.1| flagellar motor protein MotB [Pseudomonas putida KT2440]
gi|24986670|gb|AAN70471.1|AE016688_10 motility protein, MotB family [Pseudomonas putida KT2440]
Length = 346
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 9/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + Q +++ G I + + + L+ F +L +A +
Sbjct: 134 EENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFEDILLAMADTIKAV 193
Query: 107 PSTVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ ++I HTD+ N +S RA+ + L+ G + V G+A
Sbjct: 194 PN-KVSISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQVARVVGYASSS- 251
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
+ N+RI+I + +
Sbjct: 252 LFDRKDPFN-PVNRRIDIIVLTK 273
>gi|51597618|ref|YP_071809.1| hypothetical protein YPTB3318 [Yersinia pseudotuberculosis IP
32953]
gi|51590900|emb|CAH22556.1| Putative chemotaxis membrane protein [Yersinia pseudotuberculosis
IP 32953]
Length = 264
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 47/130 (36%), Gaps = 9/130 (6%)
Query: 62 GIVVSRIGDMITCYIPV--HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ V G I + S L F +L +A N+ I I HTD+
Sbjct: 111 QMEVVPQGLRILIQDDQQRDMFQRSSAVLTPFFSRLLGELAPAFNEM-DNKIIITGHTDA 169
Query: 120 IGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
N +S ERA + L+ G+ R + + A + +D D N
Sbjct: 170 SRYRDQLLYNNWNLSGERALMAHKALVNGGLDEGRVLQINTMADQMLLDPTDPLA--AKN 227
Query: 176 QRIEIQIFPR 185
+RIEI + +
Sbjct: 228 RRIEIMVLTK 237
>gi|311694109|gb|ADP96982.1| OmpA/MotB domain protein [marine bacterium HP15]
Length = 305
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
L +L I +N + I + H+DSIG+ +N +S++
Sbjct: 181 IQRSRVPFASGSTQLSDADRQLLDNIVAYVNADSTVERIFVDGHSDSIGSRIDNRALSED 240
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+V+ ++ I+VR +YP+ +N N+R I++
Sbjct: 241 RANVVAD-YLKASGIDENMITVRAHGDQYPV-SNRPAD----NRRTNIRL 284
>gi|311279213|ref|YP_003941444.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
gi|308748408|gb|ADO48160.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
Length = 309
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/209 (16%), Positives = 68/209 (32%), Gaps = 33/209 (15%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKR-------------FGSSLDKAEDEFQMQ 57
+ T I+G S + + T + + L K E
Sbjct: 67 LATAITGGPRVSNSSSPIPGGGDDFTQQQGEVKKEPNIDELKKRMEQNRLKKIRGELDQL 126
Query: 58 LQDTG----------IVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
++ I + + G I + +E +L+ IA +LN+
Sbjct: 127 IEADPKLKALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNE 186
Query: 106 FPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
P+ I++ HTD +N +S ERA+ + L+ G+ + + V G A
Sbjct: 187 IPN-KISLSGHTDDYQYANGDRGYSNWELSAERANASRRELVAGGLDDGKVLRVVGMANT 245
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + N+RI + + +
Sbjct: 246 MKLQEHGGDD--AINRRISLLVLNNQAEQ 272
>gi|146284108|ref|YP_001174261.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501]
gi|145572313|gb|ABP81419.1| chemotaxis protein MotB [Pseudomonas stutzeri A1501]
Length = 336
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 9/141 (6%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPS 108
E Q +++ G I + + + L+ F +L + + P+
Sbjct: 133 NPELQKFKDQILFEITQDGLRIQIMDAENRPMFALGSAQLQPYFEDILLALVETIAAVPN 192
Query: 109 TVIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I+I HTD+ N +S RA+ + L+ G + V G+A +
Sbjct: 193 -KISISGHTDAKPFSGRGDFGNWELSASRANAARRTLVYGGYPEEQIARVVGYASSA-LF 250
Query: 165 TNDTKVGRQNNQRIEIQIFPR 185
N+RI+I + +
Sbjct: 251 DRKDPFN-PVNRRIDILVLTK 270
>gi|158318192|ref|YP_001510700.1| OmpA/MotB domain-containing protein [Frankia sp. EAN1pec]
gi|158113597|gb|ABW15794.1| OmpA/MotB domain protein [Frankia sp. EAN1pec]
Length = 186
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 47/117 (40%), Gaps = 6/117 (5%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
G ++ ++ + L + L + + + + ++D +GT ++
Sbjct: 75 QADGSRVSTVSADYLFDANSADLRPEAATALAGTVPQIREH-DGRVQVVGYSDGLGTTEH 133
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NL +S+ RA +++YL+ + + ++ + V R +R+EI +
Sbjct: 134 NLDLSRRRAVAVQAYLVSQDIPAS-LLEVEAKGE-QGATDGVADASR---RRVEIVL 185
>gi|238764369|ref|ZP_04625319.1| hypothetical protein ykris0001_37320 [Yersinia kristensenii ATCC
33638]
gi|238697395|gb|EEP90162.1| hypothetical protein ykris0001_37320 [Yersinia kristensenii ATCC
33638]
Length = 375
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 66/168 (39%), Gaps = 20/168 (11%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRIGDMITCYIPVH----VSFVS 84
+++ L+K ++ ++ ++++ + + + I + +
Sbjct: 67 SEESRKEEYRLNKLREKLDQLIESDPRLRALRPHLLINMMDEGLRIQIIDSQNRPMFKMG 126
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKS 139
+E +L+ IA ILN P+ I++ HTD + +N +S +RA+ +
Sbjct: 127 SAQVEPYMRDILRAIAPILNDIPN-KISLSGHTDDLPYASGERGYSNWELSADRANASRR 185
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
L+ G+ + + V G A + + N+RI I + +
Sbjct: 186 ELLAGGLDEGKVLRVVGMASTMRLKEQASDD--PVNRRISILVLNKQT 231
>gi|126443721|ref|YP_001061208.1| chemotaxis LafU protein [Burkholderia pseudomallei 668]
gi|126223212|gb|ABN86717.1| chemotaxis LafU protein [Burkholderia pseudomallei 668]
Length = 311
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 10/132 (7%)
Query: 60 DTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI-- 113
D + + D + I + L F+ +L + +L + ++ +
Sbjct: 134 DGNVATAINDDGVRITIHDSDKQGMFERRSDALNPPFIRLLTALVPVLGTVTNKMVIVGH 193
Query: 114 --QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ NN +S RA + L G+ + R + G P ++
Sbjct: 194 TDATQYADASVFSNNWNLSSRRALRARQVLADGGMDAQRMFQISGMGDSVPAVPDNP--N 251
Query: 172 RQNNQRIEIQIF 183
N+R+E+ +
Sbjct: 252 HDMNRRVELLLL 263
>gi|332187888|ref|ZP_08389621.1| ompA family protein [Sphingomonas sp. S17]
gi|332012049|gb|EGI54121.1| ompA family protein [Sphingomonas sp. S17]
Length = 297
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 9/178 (5%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G G + L + T KR + E + Q + + G I
Sbjct: 120 GTGNKGSLRNPDALARDQKTFDAVKRELLRKMEVTPELKKLAQQVRFIPTDSGLRIDLVD 179
Query: 77 PVHV--SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT----LKNNLLIS 130
+ LE ++ IA + P+T I I+ HTDS+ NN ++S
Sbjct: 180 NADYSMFSMGTTSLEPAASQLIGTIAKTVADVPNT-IMIRGHTDSVPYGDPRAMNNWMLS 238
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
RA+ + L G+ +RF + G A + P+ T + R N+R+ I + R +
Sbjct: 239 SGRAEATRRRLAAGGLPESRFERIEGVADREPMITGNPSDPR--NRRVAITLLYRKGV 294
>gi|312884825|ref|ZP_07744517.1| Flagellar motor rotation protein MotB [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367477|gb|EFP95037.1| Flagellar motor rotation protein MotB [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 331
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 18/157 (11%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLP 94
+R + E+ + + ++ + + + L F
Sbjct: 125 TQERLAALAKVIEEATKQNGAQGNVNITVTPQGLRVVLQDDEKQTMFSRGGSKLTPFFED 184
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKN-----NLLISQERADVIKSYLIQRGVSSN 149
+L IA I K + I I HTDSI N +S RA+ + L+Q G+ S
Sbjct: 185 LLVAIAPIFEKVAN-PIIISGHTDSIRYKSRFNIKSNWELSTSRANAARYTLVQAGMPSE 243
Query: 150 RFISVRGFAYK---YPIDTNDTKVGRQNNQRIEIQIF 183
R + V G + + P ++ N+RIE+ +
Sbjct: 244 RVLQVTGMSDRALLNPQAPKSSE-----NRRIELFVL 275
>gi|296126314|ref|YP_003633566.1| OmpA family protein [Brachyspira murdochii DSM 12563]
gi|296018130|gb|ADG71367.1| OmpA family protein [Brachyspira murdochii DSM 12563]
Length = 200
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/186 (8%), Positives = 48/186 (25%), Gaps = 9/186 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ ++ + C + + ++ ++ + L +
Sbjct: 1 MKKIIFIFTLLIFVIACKSTP----ESSTPEDVVIAEEPTPAVEEENEEKEAAVLYLPEN 56
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + P + + E + + L+K + I +++HT + G
Sbjct: 57 TYIRDTDRGRVLETNPKIIFKLVETNIPASADITFAQVMEFLDKNTNANIILEAHTSNRG 116
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ ++ + P + +R E
Sbjct: 117 IAYPYNYNLSVVRAKNGKKYLLDKGVASERVIESPLGEALPEYPTQNDL-----RRYEFV 171
Query: 182 IFPRGN 187
I +
Sbjct: 172 IIENDD 177
>gi|83858639|ref|ZP_00952161.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633]
gi|83853462|gb|EAP91314.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633]
Length = 355
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V + + ++ + ++I H D G N+ +S+ RA +
Sbjct: 249 VVYFAWDRSEISSQAAAVINQAVSQARNCGVASVSIDGHADRSGAASYNVGLSERRARAV 308
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ ++ R IS+ F P V N+R E+ I
Sbjct: 309 RDEMV-RLGVPASAISLEAFGESRPAVETPDGVREPLNRRAEVMI 352
>gi|315058013|gb|ADT72342.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni
S3]
Length = 317
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 16/153 (10%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ G + E Q +L + ++ + +P V F L+ + L+ I
Sbjct: 150 QNLGLIRENLIKELQSKLDNN---ITIDEKTGSISLPAEVLFDKDSYVLKNEAKASLRKI 206
Query: 100 ----ATILNKFPST-----VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN- 149
+ + P I I+ HTDS G+ NL +SQ+RA + +++ S
Sbjct: 207 LSEYFDAILEDPKIFSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKL 266
Query: 150 -RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + G ++ P+ N + ++RIEI+
Sbjct: 267 QKLLMASGRSFSDPVFVNG-VEDKDKSRRIEIK 298
>gi|170691012|ref|ZP_02882178.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170144261|gb|EDT12423.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 353
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 11/119 (9%)
Query: 72 ITCYIPVHVSFVS--EVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLL 128
+T F + + L +A + + + I +TD +G +N
Sbjct: 231 VTLRADSLFRFDGGNDAAMLSAGRRELDKVARSMKTTATLRELRITGYTDRLGDNAHNQS 290
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND----TKVGR--QNNQRIEIQ 181
+S +RA + +YL RGV+ I++RG P+ ++ R N+R+EI+
Sbjct: 291 LSLQRAQTVAAYLRARGVTVP--IAIRGLGSAKPVAQCRQTRRDELVRCLAPNRRVEIE 347
>gi|85708814|ref|ZP_01039880.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
gi|85690348|gb|EAQ30351.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
Length = 378
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
E + +L T + + HTD G++ N+ +++ R +
Sbjct: 270 VFFDFDESAITADAATILDNAITAYANCGMARVMLAGHTDRSGSVSYNMALAERRNMSVM 329
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
Y+ RG+ + R + F P V N+R+E+
Sbjct: 330 EYMTGRGIPAARIMG-EAFGESQPRVPTADGVRELQNRRVEVT 371
>gi|254524741|ref|ZP_05136796.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Stenotrophomonas
sp. SKA14]
gi|219722332|gb|EED40857.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Stenotrophomonas
sp. SKA14]
Length = 280
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 8/110 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + +Q I + + I + +TD IG+ N +SQ RAD
Sbjct: 165 DALFGFDSAKLSAEGQQAVQGILAQVREAAQVQSIRVTGYTDRIGSASYNQALSQRRADA 224
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT------KVGRQNNQRIEI 180
+ + +G IS G PI + N+R++I
Sbjct: 225 V-RTALVQGGVPAGSISAEGRGAAEPIVQCEQHNRRELIACLAPNRRVQI 273
>gi|311105916|ref|YP_003978769.1| motility protein B 1 [Achromobacter xylosoxidans A8]
gi|310760605|gb|ADP16054.1| motility protein B 1 [Achromobacter xylosoxidans A8]
Length = 330
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI----------VVSRI 68
+ + ++ +R L+ + + ++ + + ++
Sbjct: 94 SEGDVRRAQGNRVEAQPMGDAERREQHRLENLKKRLENVIETSPVLKSFRPQLLIDLTTE 153
Query: 69 GDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-- 124
G I + + ++ +L+ + +LN+ P+ ++I HTD+ +
Sbjct: 154 GLRIQIIDNQNRPMFATGRADVQPYMRDILRELGPVLNELPN-KVSISGHTDASQYARGE 212
Query: 125 ---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+N +S +RA+ + L+ G++ ++ + ++G + + +D N+RI +
Sbjct: 213 RAYSNWELSADRANASRQELVAGGMNESKVLRIQGLSSSMSLVKDDPYA--AVNRRISLV 270
Query: 182 IFPRGNIKK 190
+ + ++
Sbjct: 271 VLNQSTQRR 279
>gi|319641785|ref|ZP_07996465.1| hypothetical protein HMPREF9011_02063 [Bacteroides sp. 3_1_40A]
gi|317386574|gb|EFV67473.1| hypothetical protein HMPREF9011_02063 [Bacteroides sp. 3_1_40A]
Length = 396
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 45 SSLDKAEDEFQMQ--LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
++K ++ + + + +++ + + K ++ IA I
Sbjct: 246 QYVEKIIEKVIEKPIIMKQIVETPSQPNVLCDLFNNIYFEFDKTEITPKAATIIDEIAQI 305
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ S I TD+ G+ + N+ +SQ+RAD + + LI++ N+ + +G K
Sbjct: 306 MLTDTSKKYLITGCTDAKGSSQYNMDLSQKRADAVVNALIKK-GVPNKMLKAKGVGAKIS 364
Query: 163 IDT-NDTKVGRQNNQRIEIQIF 183
+ N R+ +++I +QI
Sbjct: 365 YASQNAPNEIREGDRKIIVQII 386
>gi|149919334|ref|ZP_01907816.1| hypothetical protein PPSIR1_03938 [Plesiocystis pacifica SIR-1]
gi|149819834|gb|EDM79258.1| hypothetical protein PPSIR1_03938 [Plesiocystis pacifica SIR-1]
Length = 383
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 43/117 (36%), Gaps = 7/117 (5%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFL---PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ + F + + L+ A L + P + I H D T + N
Sbjct: 24 VAVPAAEPLQFAVDADALPEARGLERELEASAEALRQDPELHLLIIGHADEDNTDEYNRA 83
Query: 129 ISQERADVIKSYLIQRGVSSNR-FISVRGFAY---KYPIDTNDTKVGRQNNQRIEIQ 181
+SQ RA+ ++ L R S R + + + + + + N+R+E++
Sbjct: 84 LSQRRAEHVRERLAARLPSEARERLHLEARGEWDASDRAEPSSDEDAKARNRRVELR 140
>gi|92117049|ref|YP_576778.1| OmpA/MotB [Nitrobacter hamburgensis X14]
gi|91799943|gb|ABE62318.1| OmpA/MotB [Nitrobacter hamburgensis X14]
Length = 276
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 50/141 (35%), Gaps = 9/141 (6%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPV--HVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + ++ G + + ++ +++ +A L P
Sbjct: 130 PELTELSKHIMFEETKEGLNLEIVDQDGRSMFADGSREPYERTRMLIRKLAAPLKATP-L 188
Query: 110 VIAIQSHTDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
I+I HT S + +S +RA+ ++ L + G+ + +V G + P+
Sbjct: 189 RISITGHTASNFIPTRSDYDGFDLSADRANAVRQILEREGLPPSHIFAVAGKSDSMPLFP 248
Query: 166 NDTKVGRQNNQRIEIQIFPRG 186
+D N+R+ I +
Sbjct: 249 DDP--SLAANRRVTITLMREA 267
>gi|255280230|ref|ZP_05344785.1| OmpA family protein [Bryantella formatexigens DSM 14469]
gi|255269321|gb|EET62526.1| OmpA family protein [Bryantella formatexigens DSM 14469]
Length = 319
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 66/181 (36%), Gaps = 19/181 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ ++K G D E + + + I V + +
Sbjct: 122 ASQQSALDEKTTQLADQQAQIDKIIGVKADVIE-ALKQEFANNNISVEIDETTGSLVMDS 180
Query: 79 HVSF-VSEVFLEKKFLPMLQLI-----ATILNK--FPST-VIAIQSHTDSIGTLKNNLLI 129
V F E L ++ +L + + ++ + FP I I +TDS G + NL +
Sbjct: 181 SVLFDYDETELTEEGQEVLGNVLPIYCSVLMQEEYFPYLAEIIIDGYTDSSGGYEYNLEL 240
Query: 130 SQERADVIKSYLI---------QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
SQ R+ + YL+ + ++V G + + + + ++R+E+
Sbjct: 241 SQRRSLAVAEYLLGISQSFLDADDQDALKEKLTVNGHSSSNLVLNENGEEDADASRRVEV 300
Query: 181 Q 181
+
Sbjct: 301 K 301
>gi|307293778|ref|ZP_07573622.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
gi|306879929|gb|EFN11146.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
Length = 351
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/173 (14%), Positives = 58/173 (33%), Gaps = 17/173 (9%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMITCYI 76
+ K + + + E + ++ + + + + +
Sbjct: 113 PRDASGTKDQGGKATKAADRAKFESIKKELEARMARRHGINKLRKNVRFTETREGLRIDL 172
Query: 77 PVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA---IQSHTDSIGTLKNNLLI 129
+ + L + ++ +A + P+ +I S G NN ++
Sbjct: 173 IDEADFAMFAMGTDRLLPQARELVDEVAKTIRTMPNPLIVRGHTDGLPYSSGQTMNNWML 232
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S RA+ + L G+ ++RF + G A + P D R N+R+ I +
Sbjct: 233 SSARAEATRKALAASGIGNDRFARIEGVADREPFAKGDVYDPR--NRRMSIIL 283
>gi|146301157|ref|YP_001195748.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146155575|gb|ABQ06429.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 420
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 54/150 (36%), Gaps = 5/150 (3%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTG---IVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
++ D+ E + G + + ++I +
Sbjct: 272 GQSIDTNQNGVPDELESYLDKTYEKKGSGTATNNTVEELINGGYVNVYFDFNSSKPTNAS 331
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L + + L P I + D IG N +S++RA+ +K + G+ ++R +
Sbjct: 332 LSGVDFLVKYLKNNPGKSADIIGYADEIGKTSYNTELSRKRAEAVKKVAVNAGIDASR-L 390
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+V ++ N +K RQ +R+ Q+
Sbjct: 391 NVIANGEDTSVNKN-SKEARQIVRRVTFQV 419
>gi|153953154|ref|YP_001393919.1| hypothetical protein CKL_0517 [Clostridium kluyveri DSM 555]
gi|146346035|gb|EDK32571.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
Length = 245
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 59/148 (39%), Gaps = 18/148 (12%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATI---LNKFP 107
++ + Q+ G+ ++ + V F ++ + +F L + P
Sbjct: 80 EDIRKSFQNAGLDINIDKNTGDIVFSSDVLFEFNKADIRPEFKSNLDKFIPQYVNVLTSP 139
Query: 108 ST-----VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS---------NRFIS 153
I I+ HTD+IG N+ +SQ+RA+ I +Y++ + I+
Sbjct: 140 KYISSVSEIVIEGHTDNIGDYNYNMDLSQKRANSIVNYILNNNFKNLDSYSKENLKNIIT 199
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G + I +D V ++ ++R+ +
Sbjct: 200 ANGRSKSQLIKNSDGSVNQEKSRRVIFK 227
>gi|288959770|ref|YP_003450110.1| outer membrane protein [Azospirillum sp. B510]
gi|288912078|dbj|BAI73566.1| outer membrane protein [Azospirillum sp. B510]
Length = 203
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 3/107 (2%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + ++ + + K I + HTD+ G+ N +S RAD +K
Sbjct: 93 VFFDWDKSTITPAADRVIGDAVSAILKNGGAKIQVVGHTDTSGSPAYNQKLSVRRADAVK 152
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L+ + I+ G + V +N+R QI PR
Sbjct: 153 KALVAK-GIQAANITTEGKGESQLLVQTGPNVREPSNRRA--QILPR 196
>gi|262197769|ref|YP_003268978.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262081116|gb|ACY17085.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 333
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ EDE + + + + + V L + +L L P
Sbjct: 204 EREDEVERTTPRRTEKPRQRNAKVPSFTKELYFGSNSVRLSARNRRLLMRNVRWLEANPE 263
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ I+ HTD+ G + NL++ + RA+ ++S+LI++GV S R I V
Sbjct: 264 ASLTIEGHTDASGPAEYNLILGERRAESVQSFLIEQGVDSGR-IDVVSRGEDDLKY---- 318
Query: 169 KVGRQNNQRI 178
K G N+R+
Sbjct: 319 KSGSAKNRRV 328
>gi|153872134|ref|ZP_02001113.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152071400|gb|EDN68887.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 386
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 10/118 (8%)
Query: 75 YIPVHVSFVSEV-------FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+P+ F S++ L +++ L+ + P+ + I HT G N
Sbjct: 268 SLPIKFLFQSQMRDLLEVPTLRQQYAIWLRQMGLYFKNHPNHCVNIIGHTSQYGIYDFNK 327
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN--DTKVGRQNNQRIEIQIF 183
+S+ RA+ I+ + Q S G I D+ ++R+E QI
Sbjct: 328 ELSKRRAERIQFIMAQTFSGIFEHSSTIGKGPDETIVGTVPDSAEN-AIDRRVEFQIT 384
>gi|294775157|ref|ZP_06740683.1| OmpA family protein [Bacteroides vulgatus PC510]
gi|294450969|gb|EFG19443.1| OmpA family protein [Bacteroides vulgatus PC510]
Length = 396
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 45 SSLDKAEDEFQMQ--LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
++K ++ + + + +++ + + K ++ IA I
Sbjct: 246 QYVEKIIEKVIEKPIIMKQIVETPSQPNVLCDLFNNIYFEFDKTEITPKAATIIDEIAQI 305
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ S I TD+ G+ + N+ +SQ+RAD + + LI++ N+ + +G K
Sbjct: 306 MLTDTSKKYLITGCTDAKGSSQYNMDLSQKRADAVVNALIKK-GVPNKMLKAKGVGAKIS 364
Query: 163 IDT-NDTKVGRQNNQRIEIQIF 183
+ N R+ +++I +QI
Sbjct: 365 YASQNAPNEIREGDRKIIVQII 386
>gi|84687224|ref|ZP_01015105.1| Outer membrane protein, OmpA/MotB family protein [Maritimibacter
alkaliphilus HTCC2654]
gi|84664812|gb|EAQ11295.1| Outer membrane protein, OmpA/MotB family protein [Rhodobacterales
bacterium HTCC2654]
Length = 647
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 14/171 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE---FQMQLQDTGIVVSRIGDMITCYIPV 78
E +D + + +S+D+ + Q +G+ +
Sbjct: 480 DYEPIDDIRASDSDEAALREALMASMDRDPGRTYSLRQVRQFSGV----RDLAPVIEVDA 535
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILN----KFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ L + + + P V I+ HTD++G NL +S RA
Sbjct: 536 ITFDTGSAVIRSGQAEELAALGQAIRSVIEERPDAVFLIEGHTDAVGGAAYNLALSDRRA 595
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ-IFP 184
+ + L + + +G+ T + N+R ++ I P
Sbjct: 596 ESVALALTEYFDVPPENMITQGYGESELKIV--TSEAERQNRRANVRNITP 644
>gi|254883115|ref|ZP_05255825.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|254835908|gb|EET16217.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
Length = 410
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 45 SSLDKAEDEFQMQ--LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
++K ++ + + + +++ + + K ++ IA I
Sbjct: 260 QYVEKIIEKVIEKPIIMKQIVETPSQPNVLCDLFNNIYFEFDKTEITPKAATIIDEIAQI 319
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ S I TD+ G+ + N+ +SQ+RAD + + LI++ N+ + +G K
Sbjct: 320 MLTDTSKKYLITGCTDAKGSSQYNMDLSQKRADAVVNALIKK-GVPNKMLKAKGVGAKIS 378
Query: 163 IDT-NDTKVGRQNNQRIEIQIF 183
+ N R+ +++I +QI
Sbjct: 379 YASQNAPNEIREGDRKIIVQII 400
>gi|312114023|ref|YP_004011619.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
gi|311219152|gb|ADP70520.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
Length = 302
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 6/103 (5%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L +A +N+ VI ++ HTD GT +N+ +S+ R + + +Y
Sbjct: 196 FETDRDELTPVGRQYADELAAAINEQRPAVIILEGHTDERGTDAHNMDLSKRRVERVAAY 255
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRI 178
L + + R I R P + + + N+R+
Sbjct: 256 LKREKGVAAR-IETRARGKTEPYVPQNASNLTNEQLWELNRRV 297
>gi|220934494|ref|YP_002513393.1| chemotaxis MotB protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219995804|gb|ACL72406.1| chemotaxis MotB protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 290
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 63/178 (35%), Gaps = 18/178 (10%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI----------VVSRIGDMITC 74
++ L ++ ++ L+ + ++ + ++ G I
Sbjct: 99 EQMAELDAETIEELAEQQEKERLEALMQALEEAIERSQALEPFKDQLLLDITPEGLRIQI 158
Query: 75 YIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT---LKNNLLI 129
+ + + L +LQ + ++N+ P+ I+I HTD+ +N +
Sbjct: 159 VDKENRPMFDLGSAQLRGYSTAILQELGGLINQVPN-KISITGHTDARPFLRPNYSNWEL 217
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
S +RA+ + L+ G+ + V G A + N+RI I + R
Sbjct: 218 SSDRANAARRALVSGGMDEAKIGRVVGLASTV-LFDKANPEN-PINRRISIIVMTRET 273
>gi|209547147|ref|YP_002279065.1| OmpA/MotB domain-containing protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538391|gb|ACI58325.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 189
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 63/176 (35%), Gaps = 8/176 (4%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR--I 68
+ + +AS ++ S + + + +E + +
Sbjct: 11 ALGLLFAPWVASAQQLDNSQIMSTLGQVRSAAPAVDVALLVEETNANVGKGVAALPNWNK 70
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS---TVIAIQSHTDSIGTLKN 125
++ I + +E + + LIA L P I H+ S G+ K+
Sbjct: 71 LSQLSQLIVEIDFENNSTAIEPESYRTVGLIADAL-HHPDLFRYKFLIVGHSSSTGSAKH 129
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
NL +SQ+RAD I L S + G ++PI+ + +N+R+++
Sbjct: 130 NLELSQKRADAINEALSTTFAVSPDRLFSVGAGEEWPINPGHPES--ADNRRVQLI 183
>gi|149185390|ref|ZP_01863706.1| peptidoglycan-associated protein [Erythrobacter sp. SD-21]
gi|148830610|gb|EDL49045.1| peptidoglycan-associated protein [Erythrobacter sp. SD-21]
Length = 359
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 1/103 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
E + + +L + + + HTD+ G+ + N+ +++ R ++
Sbjct: 251 VFFNWDESEITPEAATILDNAVSAYANCGMASVMLAGHTDTSGSAQYNMGLAERRNSSVR 310
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + IS F V N+R+E+
Sbjct: 311 D-YLSARGIPDGRISSEAFGENQLRVPTADGVRELQNRRVEVT 352
>gi|294672796|ref|YP_003573412.1| OmpA family protein [Prevotella ruminicola 23]
gi|294473078|gb|ADE82467.1| OmpA family protein [Prevotella ruminicola 23]
Length = 384
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/132 (11%), Positives = 36/132 (27%), Gaps = 8/132 (6%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
++ ++ + V + + + K + + LN P +
Sbjct: 258 EKIVEKIVEVPAKVEEPEAKTEALRRDIFFAIGKTVIRKSEQQKVNEVVEYLNANPEAKV 317
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK-YPIDTNDTKV 170
I + D+ + +++ + IS + P ND+
Sbjct: 318 NITGYADAGTGNDRINDRLAAGRADVVVKALKKAGVAASRISYDSKGARVQPFADNDSN- 376
Query: 171 GRQNNQRIEIQI 182
R+ I I
Sbjct: 377 ------RVSIVI 382
>gi|150004726|ref|YP_001299470.1| hypothetical protein BVU_2187 [Bacteroides vulgatus ATCC 8482]
gi|149933150|gb|ABR39848.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 423
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 45 SSLDKAEDEFQMQ--LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
++K ++ + + + +++ + + K ++ IA I
Sbjct: 273 QYVEKIIEKVIEKPIIMKQIVETPSQPNVLCDLFNNIYFEFDKTEITPKAATIIDEIAQI 332
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ S I TD+ G+ + N+ +SQ+RAD + + LI++ N+ + +G K
Sbjct: 333 MLTDTSKKYLITGCTDAKGSSQYNMDLSQKRADAVVNALIKK-GVPNKMLKAKGVGAKIS 391
Query: 163 IDT-NDTKVGRQNNQRIEIQIF 183
+ N R+ +++I +QI
Sbjct: 392 YASQNAPNEIREGDRKIIVQII 413
>gi|149184887|ref|ZP_01863204.1| hypothetical protein ED21_17577 [Erythrobacter sp. SD-21]
gi|148830998|gb|EDL49432.1| hypothetical protein ED21_17577 [Erythrobacter sp. SD-21]
Length = 242
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 55/165 (33%), Gaps = 33/165 (20%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKF-PST 109
++ Q L+D G+ V +P V F + L ++ + +A+ + + P
Sbjct: 61 NDLQQSLKDRGLQVEIDTKTGVLRLPDDVLFDKGQWELTERGQAAISKVASAMVEVLPCY 120
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF------------------ 151
+ + L + + + + S + S R
Sbjct: 121 TASDLCEGERSPHLIDAVFVEGHTDSDVMSGGMNNYGLSVRRAETTFTMLQRNQPALRGF 180
Query: 152 -------------ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S+ G+ P+D D++ ++ N+RI+++
Sbjct: 181 LNRPAGEDGSAPILSLSGYGPDRPVDRGDSEEAKKRNRRIDLRFL 225
>gi|332520508|ref|ZP_08396970.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332043861|gb|EGI80056.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 743
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L + I + + I SHTDS G+ +N +S+ RA + +Y
Sbjct: 635 WDLGSATLTPAARAEIDRILLPVLAD-GVSVEIASHTDSRGSKASNRSLSERRAQAVTNY 693
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIF 183
LI +G++S+R +S GF ++ T+ + N+R + ++
Sbjct: 694 LISKGINSSRIVS-NGFGESRLLNNCSDGVSCTERDHRINRRTQFRVI 740
>gi|255602974|ref|XP_002537961.1| Outer membrane protein A precursor, putative [Ricinus communis]
gi|223514409|gb|EEF24422.1| Outer membrane protein A precursor, putative [Ricinus communis]
Length = 295
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L P L IA +LN S + I + D +G+ K N +S+ RA+ +K
Sbjct: 213 LFSFDSAKLNPN-QPKLDDIANVLNNNSSIDNVVITGYADRLGSEKYNQKLSERRANSVK 271
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPI 163
YL+ + S ++ G P+
Sbjct: 272 EYLVSK-GVSANRLNAVGKGESNPV 295
>gi|331699296|ref|YP_004335535.1| OmpA/MotB domain-containing protein [Pseudonocardia dioxanivorans
CB1190]
gi|326953985|gb|AEA27682.1| OmpA/MotB domain protein [Pseudonocardia dioxanivorans CB1190]
Length = 222
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 47/145 (32%), Gaps = 8/145 (5%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+IV G +A L + L+ +
Sbjct: 82 EIVAGVAGVRSVEAAPGVPDGLPAPAPPGAAAELAALVAAAPVTFAADSAVLDGAAAETV 141
Query: 97 QLIATILNKFPSTVIAIQSHT-DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ L P + + H D+ G + L +SQ+RA + L GV +R +S R
Sbjct: 142 AGVGRWLVAHPDVRVRLTGHAADTPGPAEVALALSQQRAQAVAEALRANGVDPSR-VSAR 200
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEI 180
G P+ T ++R+EI
Sbjct: 201 GVGDADPL---PTP---AASRRVEI 219
>gi|269123013|ref|YP_003305590.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
12112]
gi|268314339|gb|ACZ00713.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
Length = 2092
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 87 FLEKKFLPMLQLIATILNKF-PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L K ML I LN+ + I I +TD++ NL + +RA+V+ L + G
Sbjct: 1994 ELTKSQEEMLMNIVRELNENYKNRKIYITGYTDNVSGEDLNLELGLKRANVVAKKLRELG 2053
Query: 146 VSSNRFIS-VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + I V Y ++TN + GR +N+R+EI++
Sbjct: 2054 LDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVEIEL 2091
>gi|83944198|ref|ZP_00956654.1| chemotaxis MotB protein [Sulfitobacter sp. EE-36]
gi|83845065|gb|EAP82946.1| chemotaxis MotB protein [Sulfitobacter sp. EE-36]
Length = 394
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 65/188 (34%), Gaps = 21/188 (11%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG-------- 62
++ A+ + K D V+ K E + +Q+
Sbjct: 137 AAANVASASQAASDGSKSA--GDATIDNVHALDNEKFKKLEQDILQAMQENPDLDPLKKN 194
Query: 63 IVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT- 117
++ + + + I + + ++ +L + L + P+ I + HT
Sbjct: 195 LIFQQTPEGLQIQIIDQEGQPMFYSGRAEMQGATDQLLANLGKSLARLPN-KITLSGHTD 253
Query: 118 ---DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ +N +S +RA+ + GV+ +R I V G A P+ + +
Sbjct: 254 AVRFANSQKYDNWDLSSDRANATRRVFEASGVARDRIIRVSGLADTAPLVPENPTD--AS 311
Query: 175 NQRIEIQI 182
N+RI + +
Sbjct: 312 NRRITVSV 319
>gi|260222452|emb|CBA32030.1| Chemotaxis protein motB [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 313
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 61/172 (35%), Gaps = 15/172 (8%)
Query: 26 KKVFLHKSNDTDIVNKRFGS--SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
KK + + + + + + ++++ G+ + + D + +
Sbjct: 123 KKDAQTLAALAAKIASTISNNPKMAEFSSQIKLEITPDGLQIQIVDDQ-----RRPMFDI 177
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIK 138
++ +L+ I L I++ HTD +N +S +RA+ +
Sbjct: 178 GSSSVKPYMRDILKEIGVTLADV-DNKISLDGHTDQTPYGNAARGYSNWELSADRANASR 236
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
LI G+ N+ V G A + + N+RI I + + ++
Sbjct: 237 RELIAAGMPENKLARVVGMASS-LLADPQNPLSPA-NRRISILVMTKEAEER 286
>gi|269122960|ref|YP_003305537.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
12112]
gi|268314286|gb|ACZ00660.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
Length = 2078
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYI-----PVHVSFVSEV-----FLEKKFLPML 96
L++ D + + G + + + I + + L K ML
Sbjct: 1930 LEEDNDRLRRENDRIGDEIKELRERIKAIEKIKMNEDDLYTLDGYRLGIHELTKSQEEML 1989
Query: 97 QLIATILNKF-PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS-V 154
I LN+ + I I +TD++ NL + +RA+V+ L + G+ + I V
Sbjct: 1990 MNIVRELNENYKNRKIYITGYTDNVSGENLNLELGLKRANVVAKKLRELGLDMSISIRKV 2049
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
Y ++TN + GR +N+R+EI++
Sbjct: 2050 SSSGYNNIVETNKSSNGRSSNRRVEIEL 2077
>gi|257092706|ref|YP_003166347.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045230|gb|ACV34418.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 225
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 11/124 (8%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
GD IT + ++ L L + VI HTD IG+ N
Sbjct: 101 GDKITVAA-DALFDFNKATLRPAGKAKLDEVVAKAGAIKLEVIIAVGHTDRIGSDAYNQK 159
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI-----DTNDTK----VGRQNNQRIE 179
+S+ RA +K YL+ + + G K P+ T Q ++R++
Sbjct: 160 LSERRAAAVKQYLVSK-GIDANRVYTEGKGKKNPVTKPDQCLGKTSPKVIACLQPDRRVD 218
Query: 180 IQIF 183
I++
Sbjct: 219 IELI 222
>gi|255262704|ref|ZP_05342046.1| inner membrane lipoprotein YiaD [Thalassiobium sp. R2A62]
gi|255105039|gb|EET47713.1| inner membrane lipoprotein YiaD [Thalassiobium sp. R2A62]
Length = 43
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
IS +G+ PI TN+T+ GR N+R I
Sbjct: 5 GVDAERISAQGYGESEPIATNETEEGRAANRRTTIT 40
>gi|170692674|ref|ZP_02883836.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170142330|gb|EDT10496.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 328
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 61/178 (34%), Gaps = 10/178 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
K SL + + I ++ G I
Sbjct: 116 AATPVNVVPTVAPADAARLQQLKEKLISLIEQSPTLKAFKDQIRISITNEGLRIEIVDSQ 175
Query: 79 H--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-----KNNLLISQ 131
+ + L+ + +L I LN + I+I HTD++ +N +S
Sbjct: 176 NRPMFASGSPRLQTYAVAILTQIGAALNDVEN-RISIAGHTDAVPYTGGPVGYSNWELSS 234
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
ERA+ + L+ G+ + + VRG A P+++N N+RI I + + +
Sbjct: 235 ERANAARRALVSGGMHGEKLLQVRGLADVLPLNSNVVDE--PTNRRISILVMNKAAEQ 290
>gi|167643943|ref|YP_001672041.1| hypothetical protein pTer331_15 [Collimonas fungivorans]
gi|166863235|gb|ABZ01491.1| hypothetical protein [Collimonas fungivorans Ter331]
Length = 186
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 69/197 (35%), Gaps = 24/197 (12%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS---SLDKAEDEFQMQL 58
+++L + + + ++ C + ++ + L ++E++ +++
Sbjct: 1 MRKL-VVLSSILALAACSSPPKPPVVDGSNRHAVNTPETAEVIALRAQLAQSEEKLRVEQ 59
Query: 59 QDTGIVVSRIGDMITCYIPVHVS----------FVSEVFLEKKFLPMLQLIATILNKFPS 108
I + + F + LP+L +
Sbjct: 60 ARPVIAPAVLQPAPPPPARSRTFSVHFPYNNTNFHLSADDSAQLLPLLAK---------A 110
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I ++ TD + I+ RA + +LI + S ISV + + N +
Sbjct: 111 RRIEVRGRTDGQRPSTADEKIALNRALAAQRFLIGQ-GVSPAIISVNYVSAGDYVADNFS 169
Query: 169 KVGRQNNQRIEIQIFPR 185
VGR N+R++I++F +
Sbjct: 170 AVGRSLNRRVDIEVFNQ 186
>gi|163854227|ref|YP_001642270.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens
PA1]
gi|218533172|ref|YP_002423988.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
gi|240141687|ref|YP_002966167.1| putative chemotaxis protein MotB [Methylobacterium extorquens AM1]
gi|163665832|gb|ABY33199.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1]
gi|218525475|gb|ACK86060.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
gi|240011664|gb|ACS42890.1| putative chemotaxis protein MotB [Methylobacterium extorquens AM1]
Length = 277
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 13/167 (7%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV--HVSF 82
+ + ++ + + + + + I +R G ++ +
Sbjct: 107 PDRGYPDAFGQAAASLRQAMQDMPEVAELSKNVI----IAPNRKGLDVSIVDQDGRSMFP 162
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT----DSIGTLKNNLLISQERADVIK 138
+ +L+ +A L K P+ IA+ T +S RA ++
Sbjct: 163 EGSSRPNDRTRRLLERLAPTLMKLPN-RIAVTGFTATTRPGTRDTAPPWELSANRALSVR 221
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L G+ +RF SV G A P+ ++ N+R+ + +
Sbjct: 222 DVLAGAGLPDDRFASVTGKADTEPMFPDNPY--LAANRRVTVTLLAE 266
>gi|108761761|ref|YP_631366.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108465641|gb|ABF90826.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 449
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query: 96 LQLIATILNKFPSTVIAIQSHTDSI--GTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L L+ + + + I+ HTD+ +S+ RA + L+ G+ ++R +
Sbjct: 358 LALLMDMFVRDEKLRLRIEGHTDNRERPAAAARKTLSEARAAAVAKALVDAGLDASRIET 417
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
V G P N GR+ N+R+E + +
Sbjct: 418 V-GLGDTRPKAPNLLPRGRELNRRVEFVLVRKE 449
>gi|269122961|ref|YP_003305538.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
12112]
gi|268314287|gb|ACZ00661.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
Length = 2091
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 87 FLEKKFLPMLQLIATILNKF-PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L K ML I LN+ + I I +TD++ NL + +RA+V+ L + G
Sbjct: 1993 ELTKSQEEMLMNIVRELNENYKNRKIYITGYTDNVSGEDLNLELGLKRANVVAKKLRELG 2052
Query: 146 VSSNRFIS-VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + I V Y ++TN + GR +N+R+EI++
Sbjct: 2053 LDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVEIEL 2090
>gi|329118055|ref|ZP_08246768.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327465943|gb|EGF12215.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 248
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 49/132 (37%), Gaps = 19/132 (14%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D + + L + + L +A L+ + ++ HTD +G+ + N
Sbjct: 79 ADETVSLSANTLFGFDKDNLRPQAIDTLNDLAGRLSNENVQAVRVEGHTDFMGSEQYNQA 138
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG-----------RQN--- 174
+S+ RA+V+ +YL+ + IS G T + R
Sbjct: 139 LSERRANVVANYLVNQ-GVPAGKISAVGLGESQAQMTATCEDQLKGKKLSKAKRRAQLIA 197
Query: 175 ----NQRIEIQI 182
++R++++I
Sbjct: 198 CIEPDRRVDVKI 209
>gi|209546431|ref|YP_002278321.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209539288|gb|ACI59221.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 642
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 8/125 (6%)
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
GI + ++ IPV ++F ++ Q + L + + + HTD
Sbjct: 516 GGIYSENVRGIVPVSIPVPITFDFNKSSFTSIGTEAAQELLEALKEQKPGRVILIGHTDR 575
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID----TNDTKVG-RQN 174
G N +S+ RA + +L G+ ++ I G P+D N T+
Sbjct: 576 RGGDDYNQKLSERRAQAVADFLKSNGIDAS--IDAEGRGASEPVDVTATANLTEDDVDAL 633
Query: 175 NQRIE 179
N+R+E
Sbjct: 634 NRRVE 638
>gi|115359182|ref|YP_776320.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115284470|gb|ABI89986.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 170
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 24/116 (20%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
I I L + + ++D GT+ + +
Sbjct: 79 RRIVER-----------------------IGRTLRSAGINGVRVYGYSDDEGTVAYDREL 115
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
S+ RA+V+ L+ + ++V G P+ N T GR N+R I + PR
Sbjct: 116 SRRRAEVVAIELVD-VGLDGKRVAVIGKGKSDPVGDNRTPTGRAQNRRAAIVVSPR 170
>gi|124265360|ref|YP_001019364.1| outer membrane protein [Methylibium petroleiphilum PM1]
gi|124258135|gb|ABM93129.1| outer membrane protein [Methylibium petroleiphilum PM1]
Length = 182
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 8/156 (5%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
+ + ++GC S + +L+ + L+ T +VV
Sbjct: 18 LLCLAFALAGCASRPGAPGTPGSGSSGFGGLFGSGLSPALEAQRLRLRDALKGTPVVVDS 77
Query: 68 IGD-MITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
GD + +P +F + ++ +L AT +T + + K
Sbjct: 78 TGDHRLRVEVPTKHAFDPQRTAVKPALAAVLDQFATGFKPHAATT---ELQIGAPADDKV 134
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFI---SVRGFA 158
+ I Q+RA ++ YL+ RGV +R + G
Sbjct: 135 SGRIVQDRAASVRDYLVGRGVPISRIVGLGRAEGAG 170
>gi|160896052|ref|YP_001561634.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
gi|160361636|gb|ABX33249.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
Length = 345
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 59/178 (33%), Gaps = 11/178 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ SN + + + + + V+ G I +
Sbjct: 111 SVDAGRADQAQVDSNRIKALKAKVDA-MITSNARLNEFRSQIRTDVTPDGLQIQIVDEQN 169
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQE 132
+ ++ +L+ + L I++ HTD+ +N +S +
Sbjct: 170 RPMFDSGSAMVKPYMRDILREVGAALAG-AENRISLSGHTDAAPYGNADRGYSNWELSSD 228
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
RA+ + L+ G+ N+ + G A + +D + N+RI I + + K+
Sbjct: 229 RANASRRELVAAGMPLNQLARITGLASSDLLLPDDPRA--PQNRRITITVLTQEAEKR 284
>gi|158338606|ref|YP_001519783.1| outer membrane protein A [Acaryochloris marina MBIC11017]
gi|158308847|gb|ABW30464.1| outer membrane protein A, putative [Acaryochloris marina MBIC11017]
Length = 507
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 59/191 (30%), Gaps = 19/191 (9%)
Query: 8 SMFIMTTISGCGLASREK----------KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+ + +SG E + + DIV K E +
Sbjct: 318 ATAAVLVLSGTLTQVPENPSQLYDPQFVSQAADNTKKLIDIVRADNPELAKKLEGKSPST 377
Query: 58 LQDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTV-IA 112
+ + V L L ++ + + P TV +
Sbjct: 378 QTASKPTADIKSAPSIGNLKVRGEVKFAVGAANLTSSGRQTLDKLSKEIAEFNPDTVAVR 437
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+ HT G+ N +SQ+RA V+ YL + G+ + I G + P+
Sbjct: 438 VIGHTSKTGSASLNQSLSQQRAQVVVQYLKRLGI--KQAIQAEGKGFSAPL-PGIPPSD- 493
Query: 173 QNNQRIEIQIF 183
NQR EI++
Sbjct: 494 ARNQRTEIRLV 504
>gi|21328690|gb|AAM48696.1| OmpA family protein [uncultured marine proteobacterium]
Length = 488
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 54/145 (37%), Gaps = 12/145 (8%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITC-------YIPVHVSFVSEVFL-EKKFLPMLQLIAT 101
+ +T + + + + + F+ + + + LQ +
Sbjct: 343 QSGLLINAILNTDMDMRTEDLRLAVLNLNGYERMSLAFRFLEGMQIMDADSQSNLQFLKR 402
Query: 102 ILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS--NRFISVRGF 157
+ F + +DS G+ + N+ IS +RA +++ + S + V G
Sbjct: 403 LFVAGYFEGRDVMFVGFSDSQGSAEGNVQISLDRARAVRATIATLLDDSQLSDGFEVLGL 462
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
P+ NDT G+ N+R+EI +
Sbjct: 463 GEGLPLACNDTAWGQNQNRRVEIWV 487
>gi|163856411|ref|YP_001630709.1| flagellar motor protein MotB [Bordetella petrii DSM 12804]
gi|163260139|emb|CAP42440.1| flagellar motor component MotB [Bordetella petrii]
Length = 312
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 62/153 (40%), Gaps = 10/153 (6%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATI 102
S+ + + I ++ G I + ++ +L+ + +
Sbjct: 129 DSMLEENPVLKNFRPQLLIDMTTEGLRIQIVDNQKRPMFATGSAEVQPYMRDILRELGPV 188
Query: 103 LNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
LN+ P+ I+I HTD+ + +N +S +RA+ + L+ G++ + + ++G
Sbjct: 189 LNELPN-KISIAGHTDATQYARGERAYSNWELSADRANASRQELVAGGMAEGKLMRIQGL 247
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + +D N+RI + + R ++
Sbjct: 248 SSSMSLVKDDPYA--AVNRRISLVVLNRRTQQQ 278
>gi|254487179|ref|ZP_05100384.1| outer membrane protein, OmpA/MotB family [Roseobacter sp. GAI101]
gi|214044048|gb|EEB84686.1| outer membrane protein, OmpA/MotB family [Roseobacter sp. GAI101]
Length = 632
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 8/164 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
E+ L + N+ + D F ++ V + + +
Sbjct: 465 QVEQTNTLLSQQNEEALRVALETQLRDTQAQRFSLRQVRDIQQVRALAPEV--ELDALRF 522
Query: 82 FVSEVFLEKKFLPMLQLIATIL----NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ + L I T + P TVI I+ HTD++G NL +S RA+ +
Sbjct: 523 ETGSAAIQPEQARALAKIGTAITGAIRNDPRTVILIEGHTDAVGNEGYNLALSDRRAETV 582
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
L + + +G+ + T N+R ++
Sbjct: 583 ALALTEYFDVPPANLITQGYGETALKVPSQTAQ--PANRRAVVR 624
>gi|221200311|ref|ZP_03573353.1| OmpA family protein [Burkholderia multivorans CGD2M]
gi|221205990|ref|ZP_03579004.1| OmpA family protein [Burkholderia multivorans CGD2]
gi|221174002|gb|EEE06435.1| OmpA family protein [Burkholderia multivorans CGD2]
gi|221179652|gb|EEE12057.1| OmpA family protein [Burkholderia multivorans CGD2M]
Length = 277
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 78 VHVSFVSEVFLE---KKFLPMLQ-LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++ L+ L IA I + +T I + HTD IG+ ++N +S+ R
Sbjct: 160 EALFPFAKSSLDSMLPGGRAELDDAIAKIRAERGTTRIDVVGHTDRIGSDQSNRALSRAR 219
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPID---TNDTK---VGRQNNQRIEIQI 182
A+ +K YL+ G+ + R I V G P+ + +T Q ++R+ I +
Sbjct: 220 AETVKRYLVAHGLDAAR-IRVEGAGSSQPVSHCPSGETPAVIACLQKDRRVTITV 273
>gi|170728833|ref|YP_001762859.1| OmpA domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169814180|gb|ACA88764.1| OmpA domain protein transmembrane region-containing protein
[Shewanella woodyi ATCC 51908]
Length = 341
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 13/118 (11%), Positives = 35/118 (29%), Gaps = 3/118 (2%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLIS 130
I + L L + + + + I + +D+ G + N +S
Sbjct: 224 KIEQSSVAVLFGFDSSSLSSTAKAKLDEVIRLSKQSDNDTILLNGQSDNQGDSEYNQKLS 283
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ R + + + + + + + T R +R+ I + +
Sbjct: 284 EARVQQVAD-YLNANGVEVQTLEQQATGEQNAHANSRTD--RALERRVIITLTSETQV 338
>gi|116693955|ref|YP_839488.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|116651955|gb|ABK12595.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
Length = 103
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 107 PSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P + + +TD++ + NN +S+ RA + + IS G P
Sbjct: 23 PGAYVQVVGYTDNVPAGAISRGNNQALSEARAREVARIFAAA-GVPMQNISATGQGDADP 81
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
+ N T GR N+R+E+ +
Sbjct: 82 LADNGTAPGRSRNRRVEVTV 101
>gi|261885573|ref|ZP_06009612.1| Omp18 [Campylobacter fetus subsp. venerealis str. Azul-94]
Length = 72
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
++ + D G+ + N + +RA K L+ +GVS++R I + P+ T TK
Sbjct: 1 MVEGNCDEWGSDEYNYALGVKRAKTAKDALVAQGVSADR-IEITSNGESKPVCTERTKAC 59
Query: 172 RQNNQRIEIQIFP 184
N+R E +I P
Sbjct: 60 DAQNRRDEFKILP 72
>gi|194366090|ref|YP_002028700.1| OmpA/MotB domain-containing protein [Stenotrophomonas maltophilia
R551-3]
gi|194348894|gb|ACF52017.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
Length = 278
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 8/110 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + +Q + + + I + +TD IG+ N +SQ RA+
Sbjct: 163 DALFGFDSAVLSAEGQQAVQGVLAQVREASQVQSIRVTGYTDRIGSASYNQALSQRRAEA 222
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK------VGRQNNQRIEI 180
+ + +G IS G PI + + N+R++I
Sbjct: 223 V-RSALVQGGVPAASISAEGRGAAEPIVQCEQRNRRELIACLAPNRRVQI 271
>gi|144897493|emb|CAM74357.1| Outer membrane protein and related peptidoglycan-associated (lipo)
[Magnetospirillum gryphiswaldense MSR-1]
Length = 280
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/178 (10%), Positives = 53/178 (29%), Gaps = 9/178 (5%)
Query: 9 MFIMTTISGCGLASREKKKVFLH------KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ ++G + + + + + + + + + +
Sbjct: 102 LVAALAVTGATKDAPDACALAQTWHDHWLEQLEEGFQADDIAEAKNGYDKAIPLCVPKPV 161
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ V + + + +L + T + + HTD++G
Sbjct: 162 VAAPASPK--IIKQFVVYFDLGKSAITAAAKKILVDVVKDEAALKPTSVYLAGHTDTVGN 219
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
K N +S +R + + L + + + + ++ V N+R+EI
Sbjct: 220 AKANEALSIKRTETVAKELA-KMGVATKVLDMKSHGEAKLAVPTKDNVAEGKNRRVEI 276
>gi|260905077|ref|ZP_05913399.1| flagellar motor protein [Brevibacterium linens BL2]
Length = 228
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 26/158 (16%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHV--SFVSEVFLEKKFLP----MLQLIATILNK 105
DE Q L+ GI V + IP + +++K+ + +IA + +
Sbjct: 52 DEIQKDLESEGIEVIVSQNGSVISIPNDLLGFDSGSYDIKEKYEAKSLTIGTIIAREIEE 111
Query: 106 FPST----VIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRF------ 151
+ ++ HTD+ N +S RA + + S +
Sbjct: 112 HDGEEFLDTVFVEGHTDNAKYQGLEGTGNWGLSTFRAISLWKLWEEELPSDQQLETMQGP 171
Query: 152 -----ISVRGFAYKYPIDTN-DTKVGRQNNQRIEIQIF 183
SV G++ P++ N T +G N+RI+I+
Sbjct: 172 EGQPLFSVSGYSDTRPVNANQSTDLGAAANRRIDIRFT 209
>gi|305431690|ref|ZP_07400859.1| chemotaxis protein MotB [Campylobacter coli JV20]
gi|304445285|gb|EFM37929.1| chemotaxis protein MotB [Campylobacter coli JV20]
Length = 316
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 16/146 (10%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI----ATI 102
+ E Q +L ++ + +P V F L+ + L+ I
Sbjct: 156 ENLSKELQAKLDSN---ITIDQKTGSISLPSEVLFDKDSYTLKNEAKASLRKILSEYFNA 212
Query: 103 LNKFPST-----VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS--NRFISVR 155
+ P I I+ HTDS G+ NL +SQ+RA + +++ + +
Sbjct: 213 IINDPKILSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKDIRLQKLLMAS 272
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G ++ P+ N + ++RIEI+
Sbjct: 273 GRSFSDPVLVNG-VEDKDKSRRIEIK 297
>gi|238790287|ref|ZP_04634061.1| Lateral flagellar proton motor protein B [Yersinia frederiksenii
ATCC 33641]
gi|238721637|gb|EEQ13303.1| Lateral flagellar proton motor protein B [Yersinia frederiksenii
ATCC 33641]
Length = 241
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 47/142 (33%), Gaps = 21/142 (14%)
Query: 56 MQLQDTGIVVSRIGDMITCYIP--VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ + V G I + S L F +L +A N+ I I
Sbjct: 83 DAQSNLHMEVVPQGLRILIQDDKQRDMFQRSSAVLTPFFSRLLGELAPAFNEM-DNKIII 141
Query: 114 QSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFA------YKYPI 163
HTD+ N +S ERA + L++ G++ R + + P+
Sbjct: 142 TGHTDASRYRDQELYNNWNLSGERALMAHKALVKGGLADGRVLQINAMGHQMLLHETEPL 201
Query: 164 DTNDTKVGRQNNQRIEIQIFPR 185
N+RIEI I +
Sbjct: 202 A--------AKNRRIEIMILTK 215
>gi|330888144|gb|EGH20805.1| ompA family protein [Pseudomonas syringae pv. mori str. 301020]
Length = 71
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ NL +S++RA + L+ GV R I V G+ ++P++ N ++ GR N+R+EI
Sbjct: 2 RQENLKLSKDRAQAVADVLMDLGVDEKR-IHVEGYGQQFPVNANASERGRAQNRRVEIV 59
>gi|167574625|ref|ZP_02367499.1| Chemotaxis lafU protein [Burkholderia oklahomensis C6786]
Length = 303
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 10/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILN 104
+ E D + V+ D + I + L+ +F +L+ +A +L+
Sbjct: 123 RIRAEANALGMDGNVDVAINDDGVRVTIHDSSEKGMFARRSDVLDLQFDALLKALAPVLS 182
Query: 105 KFPSTVIAI----QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ ++ + + NN +S RA + LI G+ + V G
Sbjct: 183 SVTNKLVIVGHTDATQYAGASVFSNNWSLSSRRALRARQALIDGGLGEPQLFQVSGMGDS 242
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P +D + N+R+E+ +
Sbjct: 243 IPAVPDDPR--HDVNRRVELLLL 263
>gi|257057431|ref|YP_003135263.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Saccharomonospora viridis DSM 43017]
gi|256587303|gb|ACU98436.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Saccharomonospora viridis DSM 43017]
Length = 223
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/167 (13%), Positives = 52/167 (31%), Gaps = 9/167 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++ L D V+ + + + + + G
Sbjct: 62 ATVPADSRREALLAKAVIDEVDGVRSVEIAAPKSASEPHTERKA--GLQRGIDEALADTP 119
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSIGTLKNN--LLISQERAD 135
L+ ++ +A +L + P I H + + +S ERA+
Sbjct: 120 ITFAADSANLDAAGRQAVKNVADLLTEAPTDWRFEIAGHVARVPGAEPESARKLSYERAE 179
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L+ + S + G+ P+ + T ++R+EI +
Sbjct: 180 AVAEELV-KSGLSPDRVEPVGYGATRPLSDSGTS---SIDRRVEITV 222
>gi|297538877|ref|YP_003674646.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
gi|297258224|gb|ADI30069.1| OmpA/MotB domain protein [Methylotenera sp. 301]
Length = 311
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 59/144 (40%), Gaps = 13/144 (9%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
L K +++ + + G+ V + + + S+ ++ +LQ + LN
Sbjct: 145 LSKFKNQLLLDITSDGLRVQIVDEQ-----NRAMFNSSKAEMQPYAKQILQELGKTLNDV 199
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD+ +N +S +RA+ + L+ G+ + + V G +
Sbjct: 200 PN-KISLSGHTDATPYPNGEKSYSNWELSSDRANASRRELVAGGMDETKLLRVVGLSSAS 258
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
+ + N+RI I I +
Sbjct: 259 LFNKENPFD--ATNRRISIIIMNK 280
>gi|288942642|ref|YP_003444882.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
180]
gi|288898014|gb|ADC63850.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
Length = 305
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 65/162 (40%), Gaps = 9/162 (5%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVF 87
+ + + LD + I + G + H + +
Sbjct: 121 EQDAARLAALKELLERKLD-QSETLAPYKDQLLIDIVPEGLRVQIVDKEHRSMFDLGSAK 179
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI---GTLKNNLLISQERADVIKSYLIQR 144
L+ +L+ + ++N+ P+ I++ HTD+ G +N +S ERA+ + L+
Sbjct: 180 LKDYTSDILRELGGLINQVPN-RISLTGHTDARPLGGLSYSNWELSTERANAARRALVAG 238
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
G+ +++ V GFA P DT+D N+RI + + R
Sbjct: 239 GMRADKVGRVVGFASTVPFDTSDP--NNPINRRISLIVMTRE 278
>gi|167620832|ref|ZP_02389463.1| flagellar motor protein MotB [Burkholderia thailandensis Bt4]
Length = 348
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + R +
Sbjct: 267 NL--NKADPLDPENRRISIIVLNRKS 290
>gi|83721243|ref|YP_443678.1| flagellar motor protein MotB [Burkholderia thailandensis E264]
gi|167582718|ref|ZP_02375592.1| flagellar motor protein MotB [Burkholderia thailandensis TXDOH]
gi|83655068|gb|ABC39131.1| chemotaxis protein MotB [Burkholderia thailandensis E264]
Length = 344
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + R +
Sbjct: 267 NL--NKADPLDPENRRISIIVLNRKS 290
>gi|167564510|ref|ZP_02357426.1| flagellar motor protein MotB [Burkholderia oklahomensis EO147]
Length = 340
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFRQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIVVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + R +
Sbjct: 267 NL--NKADPLDPENRRISIIVLNRKS 290
>gi|160894083|ref|ZP_02074861.1| hypothetical protein CLOL250_01637 [Clostridium sp. L2-50]
gi|156864116|gb|EDO57547.1| hypothetical protein CLOL250_01637 [Clostridium sp. L2-50]
Length = 251
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 18/166 (10%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKF 92
D R + + D+ + V V F ++ L+++
Sbjct: 67 KDQQEELDRIAGIRSDLVAALRDEFADSSLNVKVDEKTGAITFDASVLFDVADSDLKEEG 126
Query: 93 LPMLQLI----ATIL--NKFPSTV--IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L+ +L K+ V I I+ HTD+ G+ NL +SQ RA + Y +
Sbjct: 127 KTFLKEFLPKYCKVLLDEKYRDYVSEIIIEGHTDTNGSYIYNLELSQHRAFSVAKYCLTE 186
Query: 145 GV---------SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++ G +Y PI D V + ++R+EI
Sbjct: 187 SNGIISSTDVELLRSVLTANGKSYSNPIYKEDGAVDLEASRRVEIL 232
>gi|146341585|ref|YP_001206633.1| putative chemotaxis protein MotB [Bradyrhizobium sp. ORS278]
gi|146194391|emb|CAL78416.1| putative chemotaxis protein MotB [Bradyrhizobium sp. ORS278]
Length = 276
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 43/117 (36%), Gaps = 7/117 (5%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN---- 126
I + + +++ +A L P + I HT + +
Sbjct: 151 EIVDQDGRSMFADGSKTPYDRTRRLIEKLAAPLKATP-LRVQITGHTAAGFVPARSDYGA 209
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S +RA+ ++ L + G+ + +V G A P+ +D N+R+ I +
Sbjct: 210 FDLSADRANAVRQILEREGLPPSHIFAVSGKADTQPLFPDDP--SLAANRRVTITLM 264
>gi|167838309|ref|ZP_02465168.1| flagellar motor protein MotB [Burkholderia thailandensis MSMB43]
Length = 488
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSNAVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + R +
Sbjct: 267 NL--NKADPLDPENRRISIIVLNRKS 290
>gi|167571659|ref|ZP_02364533.1| flagellar motor protein MotB [Burkholderia oklahomensis C6786]
Length = 340
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFRQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIVVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + R +
Sbjct: 267 NL--NKADPLDPENRRISIIVLNRKS 290
>gi|167567201|ref|ZP_02360117.1| Chemotaxis lafU protein [Burkholderia oklahomensis EO147]
Length = 303
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 10/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILN 104
+ E D + V+ D + I + L+ +F +L+ +A +L+
Sbjct: 123 RIRAEANALGMDGNVDVAINDDGVRVTIHDSSEKGMFARRSDVLDLQFDALLKALAPVLS 182
Query: 105 KFPSTVIAI----QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ ++ + + NN +S RA + LI G+ + V G
Sbjct: 183 SVTNKLVIVGHTDATQYAGASVFSNNWSLSSRRALRARQALIDGGLGEPQLFQVSGMGDS 242
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
P +D + N+R+E+ +
Sbjct: 243 IPAVPDDPR--HDVNRRVELLLL 263
>gi|305665203|ref|YP_003861490.1| OmpA family protein [Maribacter sp. HTCC2170]
gi|88709956|gb|EAR02188.1| OmpA family protein [Maribacter sp. HTCC2170]
Length = 640
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
++ + I + + K L + + +FP + I+SHT+S G+ +
Sbjct: 513 LTDKEEKKVVKIQKFYFDRGKSNITLKIKTELDKVVDAVQRFPQLKLTIESHTNSKGSKR 572
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+N +SQ R++ I + S+ I G+ + ++
Sbjct: 573 SNQQLSQRRSEAI-KTYLTTNGLSSANIKAVGYGEEKLVNNCAD 615
>gi|269123146|ref|YP_003305723.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
12112]
gi|268314472|gb|ACZ00846.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
Length = 2073
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYI-----PVHVSFVSEV-----FLEKKFLPML 96
L++ D + + G + + + I + + L K ML
Sbjct: 1925 LEEDNDRLRRENDRIGDEIKELRERIKAIEKIKMNEDDLYTLDGYRLGIHELTKSQEEML 1984
Query: 97 QLIATILNKF-PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS-V 154
I LN+ + I I +TD++ NL + +RA+V+ L + G+ + I V
Sbjct: 1985 MNIVRELNENYKNRKIYITGYTDNVSGENLNLELGLKRANVVAKKLRELGLDMSISIRKV 2044
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
Y ++TN + GR +N+R+EI++
Sbjct: 2045 SSSGYNNIVETNKSSNGRSSNRRVEIEL 2072
>gi|296127841|ref|YP_003635093.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
gi|296019657|gb|ADG72894.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
Length = 371
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 9/136 (6%)
Query: 63 IVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
I + IGD + ++F ++ L ++ +A L P+T + ++ H+D
Sbjct: 18 ISKTDIGDKLYFLDNTDINFRLGSYGFDRFNLEKVKQVAMFLQANPNTYLIVEGHSDYRP 77
Query: 122 TLKNNL------LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-DTKVGRQN 174
++S RA + + G + + G+ Y P T D
Sbjct: 78 FYNETPNGTSNVMLSYYRALAFSQQINEYGANLKDRLIPLGYGYTNPKYTERDDYYDHTK 137
Query: 175 NQRIEIQIF-PRGNIK 189
N+R+E + + ++K
Sbjct: 138 NRRLEFIVVESKKDLK 153
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 10/110 (9%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + + ++Q I+ L+ P ++ ++ H+ + +
Sbjct: 240 NSSEILFNKNSYSFDNNSDNIIQYISMFLDVNPDLLVIVEGHSFNESKYM------SYKR 293
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ I + + I G+ ++ +TN K N+R+E +I P
Sbjct: 294 SLNFLQSINKYGNYTNRIIALGYEEQFIKNTNRIKE----NRRLEFKIIP 339
>gi|317480796|ref|ZP_07939881.1| OmpA family protein [Bacteroides sp. 4_1_36]
gi|316903039|gb|EFV24908.1| OmpA family protein [Bacteroides sp. 4_1_36]
Length = 416
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + +L +A +L +P + I +TD+ G+ + NL +S+ RA
Sbjct: 296 LENIHFEFDKDVITLVSHKILDRLAALLKNYPDSHFLITGYTDARGSAQYNLRLSERRAK 355
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKY----PIDTNDTKVGRQN 174
+ L++R + + RGF + P+ ++ + G +
Sbjct: 356 AVYKALLER-GVPSHMLKWRGFGNRAALVPPVAADNIREGDRK 397
>gi|256421223|ref|YP_003121876.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256036131|gb|ACU59675.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 778
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 62/166 (37%), Gaps = 19/166 (11%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ EK ++ R +D+ + Q +++
Sbjct: 627 KAPEKTPAKPVETVAVAQPEARQEKEMDEMDAAIQHKMEGM----------------EFY 670
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L K +L +A +LN++P + ++S+TDS G+ N +S R + Y
Sbjct: 671 YDYNSAVLTTKSRNLLDRVAVVLNQYPDWKLLVRSYTDSRGSDAYNKDLSALRCYAVIEY 730
Query: 141 LIQRGVSSNRF-ISVRGFAYKYPIDTN--DTKVGRQNNQRIEIQIF 183
L+++GV S R G + P T +++R ++I
Sbjct: 731 LVRKGVPSTRLYYENIGKDPEDPCGKGVPCTDEQYMHSRRTMLKII 776
>gi|146338950|ref|YP_001203998.1| putative outer membrane protein [Bradyrhizobium sp. ORS278]
gi|146191756|emb|CAL75761.1| conserved hypothetical protein; putative outer membrane protein
[Bradyrhizobium sp. ORS278]
Length = 198
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 61/190 (32%), Gaps = 18/190 (9%)
Query: 8 SMFIMTTISGCGLASRE-----KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
M +G + + + K K + ++ + +++
Sbjct: 1 MMSAGAAFAGEAVTADQILNALKPKSVTRGITVGPQTAQPVDAAAQAKQAALLDSVRNRK 60
Query: 63 IVVSRIGDMITCY---------IPVHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVI 111
+G+ + + K + +Q + L+ +
Sbjct: 61 TRSLSLGEREQIAELAASKPKIDLEIQFDYNSAEISKGSMQAVQELGKALSDPNLKGSTF 120
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ HTD IG+ N +S+ RAD IK YL+++ + + G+ D +
Sbjct: 121 VVAGHTDGIGSDGFNQDLSERRADTIKRYLVEKYGLVGQDLVAVGYGKTKLKDAANPAD- 179
Query: 172 RQNNQRIEIQ 181
N+R+++
Sbjct: 180 -PLNRRVQVV 188
>gi|167725893|ref|ZP_02409129.1| chemotaxis LafU protein [Burkholderia pseudomallei DM98]
gi|167905052|ref|ZP_02492257.1| chemotaxis LafU protein [Burkholderia pseudomallei NCTC 13177]
Length = 271
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 10/132 (7%)
Query: 60 DTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI-- 113
D + + D + I + L F+ +L + +L + ++ +
Sbjct: 94 DGNVATAINDDGVRITIHDSDKQGMFERRSDALNPPFIRLLTALVPVLGTVTNKMVIVGH 153
Query: 114 --QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ NN +S RA + L G+ + R + G P ++
Sbjct: 154 TDATQYADASVFSNNWNLSSRRALRARQVLADGGMDAQRMFQISGMGDSVPAVPDNP--N 211
Query: 172 RQNNQRIEIQIF 183
N+R+E+ +
Sbjct: 212 HDMNRRVELLLL 223
>gi|329895780|ref|ZP_08271156.1| hypothetical protein IMCC3088_1693 [gamma proteobacterium IMCC3088]
gi|328922142|gb|EGG29499.1| hypothetical protein IMCC3088_1693 [gamma proteobacterium IMCC3088]
Length = 44
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+I + SV GFA P+DTN+T RQ N+R+EI I
Sbjct: 1 MIINQGLAELRFSVTGFADTEPVDTNETPASRQRNRRVEIII 42
>gi|293395565|ref|ZP_06639848.1| chemotaxis MotB protein [Serratia odorifera DSM 4582]
gi|291421884|gb|EFE95130.1| chemotaxis MotB protein [Serratia odorifera DSM 4582]
Length = 330
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 8/124 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKN 125
I + +E +L+ IA ILN P+ I++ HTD + +
Sbjct: 148 QIIDSQNRPMFTTGSAQVESYMRDILRAIAPILNDLPN-KISLSGHTDDLPYATGERYYS 206
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + LI G+S + + V G A + + N+RI I + +
Sbjct: 207 NWELSADRANASRRELIAGGLSEGKVLRVVGMAATMSLKQHG--ADDAINRRITILVLNK 264
Query: 186 GNIK 189
+
Sbjct: 265 QTQQ 268
>gi|226226461|ref|YP_002760567.1| hypothetical protein GAU_1055 [Gemmatimonas aurantiaca T-27]
gi|226089652|dbj|BAH38097.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 531
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 30/184 (16%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+AS V + + T I + K + V
Sbjct: 329 SIASVNNGTVTCNAAGTTTITVSKTAHGATKTQQATVECKALPAARV---------AFDT 379
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + K L++I ++ PS I+I+ HTD G+ N +++ RA+ +
Sbjct: 380 TLFSFDRAVVLKAGNDTLKVIVDVMKANPSIRISIEGHTDWYGSEAYNNKLAKSRAEAVY 439
Query: 139 SYLIQRGVSSNR----FISVRGFAYKY-PIDTNDTKV----------------GRQNNQR 177
L++ + + F + + DT+ + N+R
Sbjct: 440 KQLLKVAGTDADAIKGRVVWSSFGEQCILVRDGDTEQEPPPANRSRISDANRRAQAANRR 499
Query: 178 IEIQ 181
+EI
Sbjct: 500 VEIW 503
>gi|57168163|ref|ZP_00367302.1| probable periplasmic protein Cj0599 [Campylobacter coli RM2228]
gi|57020537|gb|EAL57206.1| probable periplasmic protein Cj0599 [Campylobacter coli RM2228]
Length = 316
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 16/146 (10%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI----ATI 102
+ E Q +L ++ + +P V F L+ + L+ I
Sbjct: 156 ENLSKELQAKLDSN---ITIDQKTGSISLPSEVLFDKDSYTLKNEAKASLRKILSEYFNA 212
Query: 103 LNKFPST-----VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS--NRFISVR 155
+ P I I+ HTDS G+ NL +SQ+RA + +++ + + +
Sbjct: 213 IINDPKILSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKDTRLQKLLMAS 272
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G ++ P+ N + ++RIEI+
Sbjct: 273 GRSFSDPVLVNG-VEDKDKSRRIEIK 297
>gi|76809964|ref|YP_331496.1| flagellar motor protein MotB [Burkholderia pseudomallei 1710b]
gi|126438376|ref|YP_001060851.1| flagellar motor protein MotB [Burkholderia pseudomallei 668]
gi|126452767|ref|YP_001068158.1| flagellar motor protein MotB [Burkholderia pseudomallei 1106a]
gi|134281430|ref|ZP_01768138.1| chemotaxis protein MotB [Burkholderia pseudomallei 305]
gi|167721693|ref|ZP_02404929.1| flagellar motor protein MotB [Burkholderia pseudomallei DM98]
gi|167740671|ref|ZP_02413445.1| flagellar motor protein MotB [Burkholderia pseudomallei 14]
gi|167826260|ref|ZP_02457731.1| flagellar motor protein MotB [Burkholderia pseudomallei 9]
gi|167847768|ref|ZP_02473276.1| flagellar motor protein MotB [Burkholderia pseudomallei B7210]
gi|167896356|ref|ZP_02483758.1| flagellar motor protein MotB [Burkholderia pseudomallei 7894]
gi|167904730|ref|ZP_02491935.1| flagellar motor protein MotB [Burkholderia pseudomallei NCTC 13177]
gi|167913010|ref|ZP_02500101.1| flagellar motor protein MotB [Burkholderia pseudomallei 112]
gi|167920947|ref|ZP_02508038.1| flagellar motor protein MotB [Burkholderia pseudomallei BCC215]
gi|217423951|ref|ZP_03455451.1| chemotaxis protein MotB [Burkholderia pseudomallei 576]
gi|226193238|ref|ZP_03788848.1| chemotaxis protein MotB [Burkholderia pseudomallei Pakistan 9]
gi|237814248|ref|YP_002898699.1| flagellar motor protein MotB [Burkholderia pseudomallei MSHR346]
gi|242314580|ref|ZP_04813596.1| chemotaxis protein MotB [Burkholderia pseudomallei 1106b]
gi|254183890|ref|ZP_04890481.1| chemotaxis protein MotB [Burkholderia pseudomallei 1655]
gi|254186366|ref|ZP_04892883.1| chemotaxis protein MotB [Burkholderia pseudomallei Pasteur 52237]
gi|254261280|ref|ZP_04952334.1| chemotaxis protein MotB [Burkholderia pseudomallei 1710a]
gi|254298791|ref|ZP_04966242.1| chemotaxis protein MotB [Burkholderia pseudomallei 406e]
gi|42766714|gb|AAS45440.1| MotB [Burkholderia pseudomallei]
gi|76579417|gb|ABA48892.1| MotB [Burkholderia pseudomallei 1710b]
gi|126217869|gb|ABN81375.1| chemotaxis protein MotB [Burkholderia pseudomallei 668]
gi|126226409|gb|ABN89949.1| chemotaxis protein MotB [Burkholderia pseudomallei 1106a]
gi|134247097|gb|EBA47183.1| chemotaxis protein MotB [Burkholderia pseudomallei 305]
gi|157808693|gb|EDO85863.1| chemotaxis protein MotB [Burkholderia pseudomallei 406e]
gi|157934051|gb|EDO89721.1| chemotaxis protein MotB [Burkholderia pseudomallei Pasteur 52237]
gi|184214422|gb|EDU11465.1| chemotaxis protein MotB [Burkholderia pseudomallei 1655]
gi|217393014|gb|EEC33036.1| chemotaxis protein MotB [Burkholderia pseudomallei 576]
gi|225934838|gb|EEH30815.1| chemotaxis protein MotB [Burkholderia pseudomallei Pakistan 9]
gi|237506677|gb|ACQ98995.1| flagellar motor protein MotB [Burkholderia pseudomallei MSHR346]
gi|242137819|gb|EES24221.1| chemotaxis protein MotB [Burkholderia pseudomallei 1106b]
gi|254219969|gb|EET09353.1| chemotaxis protein MotB [Burkholderia pseudomallei 1710a]
Length = 340
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + R +
Sbjct: 267 NL--NKADPLDPENRRISIIVLNRKS 290
>gi|288956961|ref|YP_003447302.1| hypothetical protein AZL_001200 [Azospirillum sp. B510]
gi|288909269|dbj|BAI70758.1| hypothetical protein AZL_001200 [Azospirillum sp. B510]
Length = 73
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ + TD+ G N+ +SQ+RA +I L +RGV + SV G P+ +NDT+
Sbjct: 1 MVLIGFTDAQGARAANVTLSQQRAQIIADELRRRGV---QVQSVMGLGPDLPVTSNDTEE 57
Query: 171 GRQNNQRIEIQIFPR 185
GR N+R+E+ + R
Sbjct: 58 GRDKNRRVEVWLRQR 72
>gi|75675430|ref|YP_317851.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
gi|74420300|gb|ABA04499.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
Length = 276
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 53/141 (37%), Gaps = 9/141 (6%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPV--HVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + ++ G + + ++ +++ +A L P
Sbjct: 130 PELTELSKHIMFEETKEGLNLEIVDQDGRSMFAEGSKEPYERTRMLIRRLAAPLKATP-F 188
Query: 110 VIAIQSHTDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
I++ HT S + + + +S +RA+V++ L + GV + +V G + P+
Sbjct: 189 RISVTGHTASNFIAMRSDYDGFDLSADRANVVRQILEREGVPAGHIFAVSGKSDSMPLFP 248
Query: 166 NDTKVGRQNNQRIEIQIFPRG 186
+D N+R+ I +
Sbjct: 249 DDP--SLAANRRVTITLMREA 267
>gi|270262419|ref|ZP_06190690.1| hypothetical protein SOD_c00360 [Serratia odorifera 4Rx13]
gi|270043103|gb|EFA16196.1| hypothetical protein SOD_c00360 [Serratia odorifera 4Rx13]
Length = 321
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 20/188 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRIGD 70
G +K L K + + L+K ++ ++ ++++ + +
Sbjct: 84 GGGDDPTQKDGLVKKQIDTLEKRDEELRLNKLREKLDELIESDPRLKALRPHLLINMMDE 143
Query: 71 MITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-- 124
+ I + +E +L+ IA ILN P+ I++ HTD I
Sbjct: 144 GLRIQIIDSQNRPMFKTGSAQVESYMRDILRAIAPILNDLPN-KISLSGHTDDIPYATGE 202
Query: 125 ---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+N +S +RA+ + LI G+S + + V G A + + N+RI +
Sbjct: 203 RGYSNWELSADRANASRRELIAGGLSEGKVLRVVGMAATMSLKQHGADD--AINRRITVL 260
Query: 182 IFPRGNIK 189
+ + +
Sbjct: 261 VLNKQTQQ 268
>gi|307943350|ref|ZP_07658694.1| OmpA/MotB domain-containing protein [Roseibium sp. TrichSKD4]
gi|307772980|gb|EFO32197.1| OmpA/MotB domain-containing protein [Roseibium sp. TrichSKD4]
Length = 192
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 52/155 (33%), Gaps = 13/155 (8%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIG---DMITCYIPVHVSFVSEVFLE 89
+ S D+ ++ D V + + + + +
Sbjct: 37 QGAQAKVEVSADELRKAAFDNIKKYPGDNAAEVLPLALKLNQLRQFNVEITFDFDSDRIR 96
Query: 90 KKFLPMLQLIATILNKFP---STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ + +IA L+ P + HTD+ G + N+ +SQ RAD I+ LI
Sbjct: 97 PESYETVGVIADALHT-PYLWGAKFFVVGHTDAKGDREYNIKLSQRRADAIREALITTFR 155
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ G + D + + N+R+++
Sbjct: 156 VPADRLEAVGLGEEQLRDPENPDA--EVNRRVQLI 188
>gi|149908742|ref|ZP_01897403.1| Hypothetical chemotaxis LafU protein [Moritella sp. PE36]
gi|149808284|gb|EDM68223.1| Hypothetical chemotaxis LafU protein [Moritella sp. PE36]
Length = 334
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 10/146 (6%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATIL 103
K E I + + + + + + + F +L+ +A +
Sbjct: 149 SKLEAITDSIGAAENIDIEVVPQGLRILLHDNAKHKMFRRGSAQMTPFFQDVLRSLAPVF 208
Query: 104 NKFPSTVIAIQSHTD---SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ + I HTD N +S +RA + L G+ R V +
Sbjct: 209 IPIEN-KLMISGHTDRSKFHNAAFTNWELSSQRALQARQMLQIGGMPRERVAQVVAMSDT 267
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRG 186
PID + K N+RIE+ +
Sbjct: 268 MPIDAANPKS--SVNRRIELLLLTED 291
>gi|296447839|ref|ZP_06889751.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
gi|296254639|gb|EFH01754.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
Length = 202
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 65/186 (34%), Gaps = 14/186 (7%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI---- 63
++F I + + V+ ++ + SS A+ +F +L + G
Sbjct: 11 AIFAAVVIFSAPGVASAQDAVYFVEALAPHPLRSLSISSGQAADKQFVEELGERGAGHPL 70
Query: 64 ---VVSRIGDMITCYIPVHV---SFVSEVFLEKKFLPMLQLIATIL--NKFPSTVIAIQS 115
+++ ++ + L K L + + + L K I
Sbjct: 71 SISEAAKLDAIVAARRQGGFKTHFARNSATLRGKDLEVARQLGKALGDEKLAGGKFLIMG 130
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
HTD+ G+ + N +S+ RA+ +K L + + G+ + + N
Sbjct: 131 HTDARGSDEANQALSERRAEAVKHLLTTEFGVAPDRLITVGYGETHLENPKRPFA--AEN 188
Query: 176 QRIEIQ 181
+R+++
Sbjct: 189 RRVQVV 194
>gi|116622486|ref|YP_824642.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116225648|gb|ABJ84357.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 270
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 12/132 (9%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + L L I N P VI + TD IG+ NL +
Sbjct: 132 NYQLVEQGDVTFAFGKADLRPADKAALDAIVAKYNSLPRGVIELAGFTDPIGSANFNLAL 191
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYP-----------IDTNDTKVGRQNNQRI 178
S+ RA ++ YL+ + V R I++ G + P Q +R+
Sbjct: 192 SRRRAQAVERYLVNQKVPL-RAINIVGLGKEMPPAPFAPDQAVQAAATTKAERHQLARRV 250
Query: 179 EIQIFPRGNIKK 190
I ++ G+I +
Sbjct: 251 HINVYGAGDITQ 262
>gi|190574772|ref|YP_001972617.1| putative OmpA family protein [Stenotrophomonas maltophilia K279a]
gi|190012694|emb|CAQ46322.1| putative OmpA family protein [Stenotrophomonas maltophilia K279a]
Length = 300
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 8/110 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + +Q I + + I + +TD IG+ N +SQ+RA+
Sbjct: 185 DALFGFDSAVLSAEGQQAVQGILAQVREAAQVQSIRVTGYTDRIGSASYNQTLSQQRAEA 244
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK------VGRQNNQRIEI 180
+ + +G IS G PI + + N+R++I
Sbjct: 245 V-RSALVQGGVPAASISAEGRGAAEPIVQCEQRNRRELIACLAPNRRVQI 293
>gi|254194681|ref|ZP_04901112.1| chemotaxis protein MotB [Burkholderia pseudomallei S13]
gi|169651431|gb|EDS84124.1| chemotaxis protein MotB [Burkholderia pseudomallei S13]
Length = 340
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + R +
Sbjct: 267 NL--NKADPLDPENRRISIIVLNRKS 290
>gi|121582538|ref|YP_974070.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42]
gi|120608596|gb|ABM44335.1| OmpA/MotB domain protein [Acidovorax sp. JS42]
Length = 347
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 56/156 (35%), Gaps = 6/156 (3%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
L + D + D + + V + + + + + +
Sbjct: 192 ATLAMPAEADAIPAGSAQLTDDVQPVT--VIASGPSVTTPVTETASTPLRSIPFPSAVAI 249
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L L + + + + I+ TDS GT+ N ++ RA +++
Sbjct: 250 LNDDAKRGLSELLPL--AMKAERVFIRGRTDSTGTVAGNRALAIARAATVRAAFASG-GV 306
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R + V + + +NDT+ GR N+R+E+++
Sbjct: 307 DPRKLKVS-YCVTCFVASNDTEAGRSANRRVEVELV 341
>gi|53720918|ref|YP_109904.1| flagellar motor protein MotB [Burkholderia pseudomallei K96243]
gi|167817882|ref|ZP_02449562.1| flagellar motor protein MotB [Burkholderia pseudomallei 91]
gi|52211332|emb|CAH37321.1| chemotaxis protein MotB [Burkholderia pseudomallei K96243]
Length = 340
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + R +
Sbjct: 267 NL--NKADPLDPENRRISIIVLNRKS 290
>gi|330948387|gb|EGH48647.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 64
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N+ +SQ+RA + +YL + +SVRG PI +N GR N+R+E+ + P
Sbjct: 1 NMDLSQQRAQSVATYLTSQ-GVDQAHLSVRGAGPDQPIASNADVNGRAQNRRVEVNLKP 58
>gi|304320152|ref|YP_003853795.1| OmpA family protein [Parvularcula bermudensis HTCC2503]
gi|303299055|gb|ADM08654.1| OmpA family protein [Parvularcula bermudensis HTCC2503]
Length = 397
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 1/117 (0%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V ++ V + L ++ A + +Q +TD+ G+
Sbjct: 279 VDTAPEVTELEPLVVYFDYDKSNLTDAANTLIAARAEEAIDADVASVTVQGNTDTAGSAS 338
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N +S RA V+ L+ I+V P V N+R E+
Sbjct: 339 YNQALSARRAKVVSDALVAN-GVDQSAITVEALGESNPAKPTGDGVREPLNRRTEVT 394
>gi|115360985|ref|YP_778122.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115286313|gb|ABI91788.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 264
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 36/120 (30%), Gaps = 11/120 (9%)
Query: 77 PVHVSFVSEVFLE---KKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQE 132
+ + L+ L + + T I + HTD IG N +S+
Sbjct: 146 SDALFAFGKSSLDSMLPAGKAQLDDAIERIKRHKEITRIVVVGHTDRIGPSTVNEPLSRA 205
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ------NNQRIEIQIFPRG 186
RA + + + I G P+ R ++R+ I + R
Sbjct: 206 RAQTV-RGYLISHGLNGSIIEAEGVGSSQPVTHCPAGQSRAVIACLQPDRRVSISVSGRN 264
>gi|238751745|ref|ZP_04613233.1| hypothetical protein yrohd0001_35140 [Yersinia rohdei ATCC 43380]
gi|238710016|gb|EEQ02246.1| hypothetical protein yrohd0001_35140 [Yersinia rohdei ATCC 43380]
Length = 339
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 66/168 (39%), Gaps = 20/168 (11%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRIGDMITCYIPVH----VSFVS 84
+++ L+K ++ ++ ++++ + + + I + +
Sbjct: 70 SAESRKEEYRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMG 129
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKS 139
+E +L+ IA ILN P+ I++ HTD + +N +S +RA+ +
Sbjct: 130 SAQVEPYMRDILRAIAPILNDIPN-KISLSGHTDDLPYANGERGYSNWELSADRANASRR 188
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
L+ G+ + + V G A + + N+RI I + +
Sbjct: 189 ELLIGGLDEGKVLRVIGMASTMRLK--EQAADDPVNRRISILVLNKQT 234
>gi|170748396|ref|YP_001754656.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170654918|gb|ACB23973.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 286
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 52/139 (37%), Gaps = 9/139 (6%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPV--HVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ ++ I ++ G ++ + V ++ +L+ +A L + P+
Sbjct: 140 PDIAELSKNIVIEPTKEGVNVSLVDQDGRSMFREGSVEPYERTRRVLEALAPALRRMPN- 198
Query: 110 VIAIQSHT----DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
++I +T +S RA ++ L GV ++ F +V G P+
Sbjct: 199 RLSITGYTAVARPGSARAGEPWSLSAGRALAVREILSGAGVPNDNFSAVSGRGDTEPVFP 258
Query: 166 NDTKVGRQNNQRIEIQIFP 184
++ N+R+ I +
Sbjct: 259 DNPY--LAPNRRVTITLLN 275
>gi|307266869|ref|ZP_07548390.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306918116|gb|EFN48369.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 230
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 33/170 (19%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATI---LNKFP 107
D+ + ++ + ++ V F + L+++ L + P
Sbjct: 62 DQLLKEFSNSDMTLNIDPQTGAISFSEGVFFDKDKFELKEEGKRYLNEFIPRYLSILMDP 121
Query: 108 STV-----IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV---------SSNRFIS 153
I ++ HTD G NL +SQ+RA + Y++Q + +I+
Sbjct: 122 RFKKYISQIIVEGHTDDTGDYMYNLELSQKRAFEVVRYILQSNIKGIDSKTKADLMSYIT 181
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEI--------------QIFPRGNIK 189
G +Y I N KV RQ ++R+E +I +G++K
Sbjct: 182 ANGRSYSQLIIENG-KVNRQKSRRVEFKFRLKEEEMIMEMQKILRKGSVK 230
>gi|212693934|ref|ZP_03302062.1| hypothetical protein BACDOR_03458 [Bacteroides dorei DSM 17855]
gi|237723935|ref|ZP_04554416.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|265751214|ref|ZP_06087277.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|212663466|gb|EEB24040.1| hypothetical protein BACDOR_03458 [Bacteroides dorei DSM 17855]
gi|229437761|gb|EEO47838.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|263238110|gb|EEZ23560.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 401
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ +++ + + K ++ IA I+ S I TD+ G+
Sbjct: 271 VETPNQPNVLCDLFNNIYFEFDKTEITPKAATIIDEIAQIMLTDTSKKYLITGCTDAKGS 330
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ N+ +SQ+RAD + + LI++ N+ + +G K + N R+ +++I +Q
Sbjct: 331 SQYNMELSQKRADAVVNALIKK-GVPNKMLKAKGVGAKISYASQNAPNEIREGDRKIIVQ 389
Query: 182 IF 183
I
Sbjct: 390 IV 391
>gi|85716801|ref|ZP_01047768.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
gi|85696408|gb|EAQ34299.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
Length = 214
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 53/167 (31%), Gaps = 17/167 (10%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ K L + + + D + + ++ F
Sbjct: 46 KVSKTRSLSAPAQPALSTSDLDFVKSVRGKARSLSMGDRDHLAEIAAKRPKIDLDINFDF 105
Query: 83 VSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ + P L + L + +VI + HTD G+ N +S+ RA+ +K +
Sbjct: 106 -DSAAVTPRTEPQLHSLGKALTSDELAGSVIMLGGHTDGKGSDAYNHNLSERRAEAVKRF 164
Query: 141 LIQRGVSSNRFISVRGFAYK------YPIDTNDTKVGRQNNQRIEIQ 181
L++R + G+ + P N+R+E+
Sbjct: 165 LMERYKIPAANLVAVGYGKEGYKNSADPFAP--------ENRRVEVV 203
>gi|48429443|gb|AAT42489.1| HMP-like outer membrane protein [Acinetobacter junii]
Length = 284
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 40/80 (50%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++ ++ ++ P + +A LN FP+ I+ HTD+ G K N +S RA+ +K
Sbjct: 203 VFFDTNKSNIKDQYKPEVAKVADALNTFPNATARIEGHTDNTGPRKLNERLSLARANSVK 262
Query: 139 SYLIQRGVSSNRFISVRGFA 158
S L+ +S +GFA
Sbjct: 263 SALVSEYNIDASRLSTQGFA 282
>gi|119947181|ref|YP_944861.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37]
gi|119865785|gb|ABM05262.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37]
Length = 306
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 70/198 (35%), Gaps = 22/198 (11%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS-----LDKAEDEFQMQ 57
K +S+ +M ++++ N+ I + + + +D +
Sbjct: 78 KNSLVSIPLM-------SSAKDNNTDINDTVNNALIQGEYNTQEELQFLMKRLDDLVEEI 130
Query: 58 LQDTGIVVSRIGDMITC----YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
I++ I D + + L + ML +++ N + + I
Sbjct: 131 DASNNILIEVIPDGLRILLTASEDQKMYERGGTQLTPFYEDMLLEFSSVFNAIENG-VVI 189
Query: 114 QSHTDS---IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
HTDS G +N +S +RA+ + + G+ V G A PID +
Sbjct: 190 TGHTDSAPYNGQQVSNWELSSQRANSARRIMELGGLKKANITQVIGMANTKPIDKQN--E 247
Query: 171 GRQNNQRIEIQIFPRGNI 188
N+R+E+ I R +
Sbjct: 248 LSSINRRVEVIILTRQAV 265
>gi|294013095|ref|YP_003546555.1| chemotaxis MotB protein [Sphingobium japonicum UT26S]
gi|292676425|dbj|BAI97943.1| chemotaxis MotB protein [Sphingobium japonicum UT26S]
Length = 351
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 62/171 (36%), Gaps = 10/171 (5%)
Query: 19 GLASREKKKVFLHKSNDT--DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
++++ ++ + + K + + + + L++ + G I
Sbjct: 116 ASGTKDQGGKATKAADRAKFESIRKELEARMAR-RQGIRKLLKNIRFTETHEGLRIDLID 174
Query: 77 PVHV--SFVSEVFLEKKFLPMLQLIATILNKFPSTVIA---IQSHTDSIGTLKNNLLISQ 131
+ L + ++ +A + P+ +I S G NN ++S
Sbjct: 175 EADFAMFAMGTDRLLPQARELVNEVAATIRTMPNPLIVRGHTDGLPYSAGQTMNNWMLSS 234
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA+ + L G+ ++RF + G A + P D R N+R+ I +
Sbjct: 235 ARAEATRKALAASGIGNDRFARIEGVADREPFAKGDVYDPR--NRRMSIIL 283
>gi|160944675|ref|ZP_02091902.1| hypothetical protein FAEPRAM212_02189 [Faecalibacterium prausnitzii
M21/2]
gi|158443859|gb|EDP20863.1| hypothetical protein FAEPRAM212_02189 [Faecalibacterium prausnitzii
M21/2]
Length = 246
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 65/207 (31%), Gaps = 29/207 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDT-----DIVNKRFGSSLDKAEDEFQ 55
M+ L L ++ + + + + K + + D
Sbjct: 23 MMAALLLVFILILSCTLLETRATYEAKQAELEEKEQIILNQQSQIDTIVGVRGDLIDALS 82
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPST----- 109
+ + V + F ++ L+ L A L K+ S
Sbjct: 83 KEFSGNDLSVKVDAQSGAITFDSTLLFGYNDDKLQDSGKTFL---AEFLPKYFSVLLGKD 139
Query: 110 ------VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS---------NRFISV 154
I I+ HTD+ G NL +SQ RA + SY + ++
Sbjct: 140 FSPYVAEIIIEGHTDTDGGYMYNLQLSQNRAFAVVSYCLDENNHFLSDSQLEELRVLLTA 199
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G ++ PI D V Q ++R+EI+
Sbjct: 200 NGRSWSAPIYAADGTVDMQASRRVEIK 226
>gi|114570410|ref|YP_757090.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
gi|114340872|gb|ABI66152.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
Length = 359
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 1/105 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L + ++ + T + + TD G N+ +S+ RA V++
Sbjct: 254 VYFEWDSSTLTAQARAVIAQASNQRGSCGVTRVTVAGFTDRSGAASYNVGLSERRARVVR 313
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L+ R IS+ F V N+R E+ I
Sbjct: 314 EELV-RLGVPASTISMEAFGETRNAVATADGVREPLNRRTEVVIV 357
>gi|239950061|gb|ACS36762.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 282
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 37/96 (38%), Gaps = 3/96 (3%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + + + + +TD IG NL +SQ+RA
Sbjct: 184 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 243
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ + +Y++ + + ++ G+ P+ N
Sbjct: 244 ETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDA 278
>gi|260574615|ref|ZP_05842618.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259023032|gb|EEW26325.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 213
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
+ L+ L A + +FP + H D +G+ N + +RA + SY
Sbjct: 69 FEFNSAVLDGAAQAALDQQANWIRQFPEVRFRVYGHADRVGSNGYNHALGLKRARAVVSY 128
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
L RG+S +R ++ + P+ R N+R
Sbjct: 129 LNSRGISRSRLEAMVSYGETRPVVDTLGPEVR--NRR 163
>gi|188584558|ref|YP_001928003.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
gi|179348056|gb|ACB83468.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
Length = 277
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 55/167 (32%), Gaps = 13/167 (7%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV--HVSF 82
+ + ++ + + + + + I SR G ++ +
Sbjct: 107 PDRGYPDAFGQAAASLRQAMQDMPEVAELSKNVI----IAPSRKGLDVSIVDQDGRSMFP 162
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT----DSIGTLKNNLLISQERADVIK 138
+ +L+ +A L K + IA+ T +S RA ++
Sbjct: 163 EGSSRPNDRTRRLLERLAPTLMKLSN-RIAVTGFTATARPGTRDTAPPWELSANRALSVR 221
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L G+ +RF SV G A P+ ++ N+R+ + +
Sbjct: 222 DVLANAGLPDDRFASVAGKADTEPMFPDNPY--LAANRRVTVTLLSE 266
>gi|289577893|ref|YP_003476520.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9]
gi|289527606|gb|ADD01958.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9]
Length = 230
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 64/171 (37%), Gaps = 35/171 (20%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATI-------- 102
D+ + ++ + +S V F + L+++ L
Sbjct: 62 DQLFKEFSNSDMTLSIDPQTGAISFSEGVFFDKDKFELKEEGKRYLNEFIPRYLSILMDP 121
Query: 103 -LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV---------SSNRFI 152
K+ + I ++ HTD G NL +SQ+RA + Y++Q + +I
Sbjct: 122 RFKKY-ISQIIVEGHTDDTGDYMYNLELSQKRAFEVVRYILQSNIKGIDSKTKADLMSYI 180
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEI--------------QIFPRGNIK 189
+ G +Y I N KV RQ ++R+E +I +G++K
Sbjct: 181 TANGRSYSQLIIENG-KVNRQKSRRVEFKFRLKEEEMIMEMQKILGKGSVK 230
>gi|213416605|ref|ZP_03349749.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 170
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 10/134 (7%)
Query: 63 IVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + G I + +E +L+ IA +LN P+ I++ HTD
Sbjct: 3 IDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPN-RISLAGHTDDF 61
Query: 121 GTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+N +S +RA+ + L+ G+ + + + V G A + N
Sbjct: 62 PYANGEKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AIN 119
Query: 176 QRIEIQIFPRGNIK 189
+RI + + + +
Sbjct: 120 RRISLLVLNKQAEQ 133
>gi|238788297|ref|ZP_04632091.1| hypothetical protein yfred0001_7400 [Yersinia frederiksenii ATCC
33641]
gi|238723543|gb|EEQ15189.1| hypothetical protein yfred0001_7400 [Yersinia frederiksenii ATCC
33641]
Length = 365
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 66/168 (39%), Gaps = 20/168 (11%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRIGDMITCYIPVH----VSFVS 84
+++ L+K ++ ++ ++++ + + + I + +
Sbjct: 70 SEESRKEEYRLNKLREKLDQLIESDPRLRALRPHLLINMMDEGLRIQIIDSQNRPMFKMG 129
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKS 139
+E +L+ IA ILN P+ I++ HTD + +N +S +RA+ +
Sbjct: 130 SAQVEPYMRDILRAIAPILNDIPN-KISLSGHTDDLPYATGERGYSNWELSADRANASRR 188
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
L+ G+ + + V G A + T N+RI I + +
Sbjct: 189 ELLIGGLDEGKVLRVVGMASTMRL-KEQTADD-PVNRRISILVLNKQT 234
>gi|145297581|ref|YP_001140422.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142850353|gb|ABO88674.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 343
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 47/116 (40%), Gaps = 11/116 (9%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + V + +TD IG+ N +S++RA
Sbjct: 221 SDVLFDFNKATLKPEGGQALDTLYGEIEAARPTDGVATVIGYTDRIGSDAYNQRLSEQRA 280
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKV------GRQNNQRIEIQI 182
+ YL+ + ++V G P+ D+ +K ++R+E+++
Sbjct: 281 QTVADYLVGK-GLPAGKVNVEGRGKGSPVTGDSCTSKSKHELIVCLAPDRRVEVKV 335
>gi|126662222|ref|ZP_01733221.1| outer membrane protein, OmpA/MotB family [Flavobacteria bacterium
BAL38]
gi|126625601|gb|EAZ96290.1| outer membrane protein, OmpA/MotB family [Flavobacteria bacterium
BAL38]
Length = 444
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 8/165 (4%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY------IPV 78
+ D + + + DE + + G+ + + I
Sbjct: 281 DAEPNTIGGVAVDTKGRAIDVNKNGVPDELEPRDGKRGLNTYDENEATSFNYLVDQGIVN 340
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++ L I L K P + + D+ G K N ++Q+RA +
Sbjct: 341 IFFDTNKDTPNTASTNNLYYIINFLKKHPEAKVRARGFADTTGDEKKNEELAQKRA-MNS 399
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
I + S I + G + +K GRQ +R+ ++
Sbjct: 400 KEFIVKSGISADRIEILGSGEDASM-DTSSKTGRQLARRVSFELI 443
>gi|224437881|ref|ZP_03658828.1| hypothetical protein HcinC1_07905 [Helicobacter cinaedi CCUG 18818]
gi|313144330|ref|ZP_07806523.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129361|gb|EFR46978.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 238
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/218 (12%), Positives = 77/218 (35%), Gaps = 38/218 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSND---TDIVNKRFGSSLDKAEDEFQMQ 57
M+ + + +F++ +S + + ++ + + + +++ + + ++ ++
Sbjct: 12 MMAGIMM-IFLLIMVSFMLITQKTQEDLKIQNQKLLELNEAMSEIAQNYSNLQQELYEAL 70
Query: 58 LQDTGIVVSR------IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI------LNK 105
L++ + + + I P + ++K+F +L L K
Sbjct: 71 LKEFEKDLKKWDAHIDEDNTIRFNEPEVLFDTGAKQVKKRFQDILDDFFPRYVKILSLPK 130
Query: 106 FPST--VIAIQSHTDSIGTLKNNLLI--------SQERADVIKSYLIQRGVSSN------ 149
F + I I+ HT L SQ RA + Y +
Sbjct: 131 FQDSIEEIRIEGHTSQSWFSAQTLEERYLGNAELSQARALEVLKYCFNLKKIDSHKEWLI 190
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ G ++ P++ +D ++R+E ++ + N
Sbjct: 191 KVFRANGLSFAKPLEDDD------KSRRVEFRVITKAN 222
>gi|309783317|ref|ZP_07678027.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
gi|308917861|gb|EFP63548.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
Length = 351
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 56/156 (35%), Gaps = 6/156 (3%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
L + D + D + + + + + S
Sbjct: 192 ATLAIPAEADAIPAGSAQLTDDVRPVT--VVAVGPATAAPVAATASSSLRSLPFSSSVAN 249
Query: 88 LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
L + L + + + + I+ TDS GT+ N ++ RA +++ RG
Sbjct: 250 LNDEAKRSLSELLPL--AMTAERVLIRGRTDSTGTVAGNRALAIARAATVRAAFA-RGGV 306
Query: 148 SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R + V + + +NDT+ GR N+R+E+++
Sbjct: 307 DPRKLKVS-YCVTCFVASNDTEAGRSANRRVEVELV 341
>gi|33592172|ref|NP_879816.1| flagellar motor protein MotB [Bordetella pertussis Tohama I]
gi|33596124|ref|NP_883767.1| flagellar motor protein MotB [Bordetella parapertussis 12822]
gi|33601523|ref|NP_889083.1| flagellar motor protein MotB [Bordetella bronchiseptica RB50]
gi|33571817|emb|CAE41326.1| chemotaxis protein MotB [Bordetella pertussis Tohama I]
gi|33573127|emb|CAE36772.1| chemotaxis protein MotB [Bordetella parapertussis]
gi|33575959|emb|CAE33038.1| chemotaxis protein MotB [Bordetella bronchiseptica RB50]
gi|332381588|gb|AEE66435.1| flagellar motor protein MotB [Bordetella pertussis CS]
Length = 315
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 71/189 (37%), Gaps = 20/189 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI----------VVSRI 68
+ + ++ +R L++ + + ++++ + ++
Sbjct: 93 SQGDVRRAEGNRVEAQPMGDAERRDRHRLERLKVRLENLIEESPVLKNFRPQLLIDMTTE 152
Query: 69 GDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-- 124
G I + + ++ +L+ + +LN P+ I+I HTD+ +
Sbjct: 153 GLRIQIVDNQNRPMFATGSADVQPYMRDILRELGPVLNDLPN-KISIAGHTDASQYARGE 211
Query: 125 ---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+N +S +RA+ + L+ G+ + + ++G A + +D N+RI +
Sbjct: 212 RAYSNWELSADRANASRQELVAGGMHEGKVLRIQGLASSMSLVKDDPFA--AVNRRISLV 269
Query: 182 IFPRGNIKK 190
+ ++
Sbjct: 270 VLNASTQRR 278
>gi|330815146|ref|YP_004358851.1| MotB [Burkholderia gladioli BSR3]
gi|327367539|gb|AEA58895.1| MotB [Burkholderia gladioli BSR3]
Length = 361
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + G I + +S +E +L+ I LN
Sbjct: 148 EANPVLRQFKQQIRIDSTLTGLRIEIVDTQKRPMFALSSDAVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIVMQGHTDAVPYSGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVTGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + R +
Sbjct: 267 NL--NKADPLDPENRRISILVLNRKS 290
>gi|239781764|pdb|2ZOV|A Chain A, Structure Of The Periplasmic Domain Of Motb From
Salmonella (Crystal Form I)
Length = 210
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 66/184 (35%), Gaps = 20/184 (10%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMI 72
+++ + N ++ + S L+K + ++ I + + G I
Sbjct: 5 TQQQGEVEKQPNIDELKKRXEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRI 64
Query: 73 TC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
+E +L+ IA +LN P+ I++ HTD +
Sbjct: 65 QIIDSQNRPXFKTGSAEVEPYXRDILRAIAPVLNGIPN-RISLAGHTDDFPYANGEKGYS 123
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + + V G A + N+RI + + +
Sbjct: 124 NWELSADRANASRRELVAGGLDNGKVLRVVGXAATXRLSDRGPDD--AINRRISLLVLNK 181
Query: 186 GNIK 189
+
Sbjct: 182 QAEQ 185
>gi|238795043|ref|ZP_04638637.1| hypothetical protein yinte0001_4570 [Yersinia intermedia ATCC
29909]
gi|238725644|gb|EEQ17204.1| hypothetical protein yinte0001_4570 [Yersinia intermedia ATCC
29909]
Length = 388
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 12/124 (9%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
I + + +E +L+ IA ILN P+ I++ HTD + +
Sbjct: 141 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPN-KISLSGHTDDLPYANGERGYS 199
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID--TNDTKVGRQNNQRIEIQIF 183
N +S +RA+ + L+ G+ + + V G A + D V N+RI I +
Sbjct: 200 NWELSADRANASRRELLVGGLDEGKVLRVVGMASTMRLKEQPGDDPV----NRRISILVL 255
Query: 184 PRGN 187
+
Sbjct: 256 NKQT 259
>gi|1332435|emb|CAA63037.1| outer membrane protein [Aeromonas salmonicida]
gi|1588799|prf||2209353B major outer membrane protein OmpAII
Length = 330
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 41/118 (34%), Gaps = 12/118 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + + L + + +TD IG+ NL +S+ RA
Sbjct: 207 SDVLFAFGKSTLKPEGVAALNTLYHQNVDVQPKDGSAVVVGYTDRIGSDAYNLKLSEARA 266
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQIF 183
+ +L+ + +++ G P+ ++R+E+++
Sbjct: 267 RTVADFLVGK-GLPAGKVAIEGRGEASPVTGTQCDGIKAKAQLIACLAPDRRVEVRVT 323
>gi|288962674|ref|YP_003452968.1| chemotaxis protein [Azospirillum sp. B510]
gi|288914940|dbj|BAI76424.1| chemotaxis protein [Azospirillum sp. B510]
Length = 347
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 73/188 (38%), Gaps = 31/188 (16%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ--------DTGIVVSRIGDM 71
++ + + L + +L+ E + + ++ +V+ ++ +
Sbjct: 169 ASAPQATRAELEALLERQSSELGEKVALESLERDLRQRIAASPDLNALQGSLVIQQVPEG 228
Query: 72 ITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN-- 125
+ + + V + + +++++A+ L P+ I I HTD +G +
Sbjct: 229 LRVQLTDQARFSMFKVGSAQMNDQGRRLMRMVASALAAVPN-PIGITGHTDGLGYAADAK 287
Query: 126 --NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY------PIDTNDTKVGRQNNQR 177
N +S +RA+ + LI G+ + R + V G A P+D + N+R
Sbjct: 288 YGNWELSSDRANAARRELIASGIPNTRIVRVEGRADLDHFGAGGPLDPS--------NRR 339
Query: 178 IEIQIFPR 185
I I + R
Sbjct: 340 ISITLLRR 347
>gi|27377528|ref|NP_769057.1| hypothetical protein bll2417 [Bradyrhizobium japonicum USDA 110]
gi|27350672|dbj|BAC47682.1| bll2417 [Bradyrhizobium japonicum USDA 110]
Length = 213
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 15/189 (7%)
Query: 6 GLSMFIMTTISG---CGL-------ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
LSM ++G + + V + + L+ +
Sbjct: 18 ALSMTAGLALAGDNNISSDKILDALKPKPVTRGLSAGPQADPAVQAKEATFLNTVRNRST 77
Query: 56 MQLQ-DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIA 112
L ++ + + + K +P +Q + L+ +
Sbjct: 78 RSLSTGEREQIAELAATKPKIDLEIQFDYNSADIAKTSVPSVQALGKALSDPALKGSTFV 137
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+ HTD+IG + N +S+ RAD IK YL+Q + + G+ DT +
Sbjct: 138 VAGHTDAIGGEEYNQGLSERRADTIKKYLVQNYGLNGTDLVTVGYGKTKLKDTANGAD-- 195
Query: 173 QNNQRIEIQ 181
N+R+++
Sbjct: 196 PINRRVQVV 204
>gi|307726644|ref|YP_003909857.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307587169|gb|ADN60566.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 357
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 72 ITCYIPVHVSFVS--EVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLL 128
I + F + + L +A L + +AI +TD +G +N
Sbjct: 235 IALRADLLFRFDGGNDAAMLPAGRRELDEVARSLKTVSALRELAITGYTDRLGENAHNQR 294
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND----TKVGR--QNNQRIEIQ 181
+S +RA + YL GV+S ISVRG A P+ ++ R N+R+EIQ
Sbjct: 295 LSLQRAQTVARYLRAHGVTSP--ISVRGLASAKPVTECRQTRRDELVRCLAPNRRVEIQ 351
>gi|190572619|ref|YP_001970464.1| flagellar motor protein MotB [Stenotrophomonas maltophilia K279a]
gi|190010541|emb|CAQ44150.1| putative chemotaxis protein [Stenotrophomonas maltophilia K279a]
Length = 312
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 61/180 (33%), Gaps = 19/180 (10%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI----------VVSRIGDM 71
S + + +R L+ E Q + + ++ G
Sbjct: 103 SNDPFQNQKEAVPQPVDQQQRDKQQLEALMKELQEAISRSQALEPFKDQLLLDLTPEGLR 162
Query: 72 ITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---- 125
I + + + L+ +L +A LN P+ I++ HTD
Sbjct: 163 IQIVDKQNRPMFDLGSATLKPYTQQILHELAEYLNHVPN-RISLTGHTDITAYSAARGYG 221
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ ++ V G + + + T N+RI I + +
Sbjct: 222 NWELSADRANAARRALVDGGLEDSKITRVVGLSSS--VLFDKTDPQNPINRRISIVVMTK 279
>gi|289678321|ref|ZP_06499211.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
Length = 62
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+SQ+RA + +YL + +SVRG PI +N GR N+R+E+ + P
Sbjct: 1 DLSQQRAQSVATYLTSQ-GVDQAHLSVRGAGPDQPIASNADVNGRAQNRRVEVNLKP 56
>gi|120555689|ref|YP_960040.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
gi|120325538|gb|ABM19853.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 319
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 63/186 (33%), Gaps = 21/186 (11%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRI 68
+E + + ++ + + + EFQ +++++ + ++
Sbjct: 86 ATQDQEASTIQIEDEVVDELADTLEQRRMRQLFQEFQERIENSDTLQEFKDQLLLDITDE 145
Query: 69 GDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL--- 123
G I + L+ +L +A L I+I HTD+
Sbjct: 146 GLRIQIVDRSGRPMFDSGRDELKYYSQDILFELAKKLGSV-DNKISITGHTDATPFSGRP 204
Query: 124 -KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQRIEIQ 181
N +S +RA+ + L+ GV + V G + D N T N+RI I
Sbjct: 205 GYTNWELSADRANTARRALVAGGVRLEQIARVVGLSDSVLFDKDNPTA---PVNRRISII 261
Query: 182 IFPRGN 187
+ +
Sbjct: 262 VLNKKT 267
>gi|327402535|ref|YP_004343373.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327318043|gb|AEA42535.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 396
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 12/118 (10%), Positives = 35/118 (29%), Gaps = 8/118 (6%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT--LKNNLLIS 130
+ FL + L ++A ++ + P+ I + + + +
Sbjct: 278 RIEKQEVYFGFGKTFLTPQAKAALDIVAKVMTENPTMSITVIGSNNEEEDKLAEKKDFYA 337
Query: 131 QERA--DVIKSYLIQRGVSSNRFISVRGFAYKYP---IDTNDTKVGR-QNNQRIEIQI 182
+ + S + + P I +D + + N+R+ ++
Sbjct: 338 DMDTKRNQAVKEYLLSKGISATRLKSESKGNEEPSPEIKESDDEDLKLAKNRRVIFKV 395
>gi|269104043|ref|ZP_06156740.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163941|gb|EEZ42437.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP
102761]
Length = 261
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 47/121 (38%), Gaps = 3/121 (2%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
V + + + ++ L + L A IL + + + HTD+ G
Sbjct: 119 EVELREQLELYFAVDNQFALNRSELLPAYQQALTQAAAILKRHRHWHVKLVGHTDTQGQK 178
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI--EIQ 181
+N + RA+ +K +L++ + +SV + ++ + N+++ EI
Sbjct: 179 HDNYHLGLTRANNVKRFLLE-HGVNGHQVSVLSTGESQAVPDTHSRTMQLANRQVVAEIL 237
Query: 182 I 182
+
Sbjct: 238 V 238
>gi|119897740|ref|YP_932953.1| flagellar motor protein MotB [Azoarcus sp. BH72]
gi|119670153|emb|CAL94066.1| flagellar motor protein MotB [Azoarcus sp. BH72]
Length = 357
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 63/174 (36%), Gaps = 10/174 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + + ++ I K ++ +A + + + + G I
Sbjct: 120 SADGKGRDEAESNRERSRLIDLKGRIEAIVEANPDLRQFKNQILMDIVNEGLRIQLVDEQ 179
Query: 79 H--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-----KNNLLISQ 131
+ + + L +L+ I LN + +++ HTDS +N +S
Sbjct: 180 NRPMFNSASADLRPYTRDLLRAIGRALNDVGN-SVSVSGHTDSAQYAGGERGFSNWELSS 238
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA+ + L+ G+ + + + V G A P+ N N+RI I + +
Sbjct: 239 NRANASRRELVSGGLLAGKVVRVVGLADTIPL--NRANPMDAVNRRISIIVLNK 290
>gi|320352308|ref|YP_004193647.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320120810|gb|ADW16356.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
Length = 189
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+PV + + E L P T + + HT S+GT NL +S+ RA
Sbjct: 70 SLPVILFPLGSTEPEPGQTDQLISGLRHCQVNPITPLVVTGHTCSLGTEATNLRLSRLRA 129
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + L RG + +V G P+ TN TK R N+R+ +
Sbjct: 130 EQVATLLRDRGYTVA---TVSGKGATDPVSTNPTK--RHLNRRVTLV 171
>gi|332653291|ref|ZP_08419036.1| OmpA family protein [Ruminococcaceae bacterium D16]
gi|332518437|gb|EGJ48040.1| OmpA family protein [Ruminococcaceae bacterium D16]
Length = 213
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 43/139 (30%), Gaps = 15/139 (10%)
Query: 55 QMQLQDTGIVVSRI----GDMITCYIPVHVSF-VSEVFLEKKF-LPMLQLIATILNKFPS 108
+ Q + V + S+ FL++ L+ +A ++ P
Sbjct: 59 EEQSAAGSVTVEEEPLVFETPFELNSTQVMFKAESDAFLDEAAAKEALKPVAEVILAHPD 118
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA-YKYPIDTND 167
I + T + G + + +S RA +K+ L+ ++ G P
Sbjct: 119 HPILLAGTTATDGDQQARVDLSNRRAAAVKNLLVSAFGVPENQLTTIGLGFEADPFVRGQ 178
Query: 168 TKVGR--------QNNQRI 178
+ N+R+
Sbjct: 179 DRDANGKFVESEGAKNRRV 197
>gi|146312113|ref|YP_001177187.1| flagellar motor protein MotB [Enterobacter sp. 638]
gi|145318989|gb|ABP61136.1| OmpA/MotB domain protein [Enterobacter sp. 638]
Length = 309
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 66/184 (35%), Gaps = 20/184 (10%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMI 72
++K + N ++ + + L K + ++ I + + G I
Sbjct: 92 TQQKGEVKKEPNIDELKKRMEQARLKKLRGDLDQLIEADPKLRALRPHLKIDLVQEGLRI 151
Query: 73 TC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
+ +E +L+ IA +LN P+ I++ HTD +
Sbjct: 152 QIIDSQNRPMFKTGSAEVEYYMRDILRGIAPVLNGIPN-HISLSGHTDDFQYANGEKGYS 210
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + V G + + + N+RI + + +
Sbjct: 211 NWELSADRANASRRELVAGGLDDGKVLRVVGMSSSMRVTDRGPED--AVNRRISLLVLNQ 268
Query: 186 GNIK 189
+
Sbjct: 269 QAEQ 272
>gi|157371226|ref|YP_001479215.1| OmpA/MotB domain-containing protein [Serratia proteamaculans 568]
gi|157322990|gb|ABV42087.1| OmpA/MotB domain protein [Serratia proteamaculans 568]
Length = 321
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 20/188 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRIGD 70
G ++ L K + + L+K ++ ++ ++++ + +
Sbjct: 84 GGGDDPTQQDGLVKRQIDTLEKRDEELRLNKLREKLDELIESDPRLKALRPHLLINMMDE 143
Query: 71 MITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-- 124
+ I + +E +L+ IA ILN P+ I++ HTD I
Sbjct: 144 GLRIQIIDSQNRPMFKTGSAQVESYMRDILRAIAPILNDLPN-KISLSGHTDDIPYATGE 202
Query: 125 ---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+N +S +RA+ + LI G+S + + V G A + + N+RI +
Sbjct: 203 RGYSNWELSADRANASRRELIAGGLSEGKVLRVVGMAATMSLKQHGADD--AINRRITVL 260
Query: 182 IFPRGNIK 189
+ + +
Sbjct: 261 VLNKQTQQ 268
>gi|42522454|ref|NP_967834.1| outer membrane protein [Bdellovibrio bacteriovorus HD100]
gi|39574986|emb|CAE78827.1| outer membrane protein [Bdellovibrio bacteriovorus HD100]
Length = 368
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 15/169 (8%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGS---SLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
G K + V + ++ E + + G + + +
Sbjct: 191 GWNPSAYKPSVRSTAAAEPTVMEEVQEDITYQERVEPARPVAAVEAGSALKDVNMNMIAG 250
Query: 76 IPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQE 132
+ F S + LQ +A +LN+ P + I + D+ GT + N ISQ
Sbjct: 251 AGSAIQFRSSQYAISGADNRKLQQVAKVLNENPDLVERVEIHGYADATGTDEINQRISQA 310
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
RAD +K+ L + G ++ + G D+ R ++R E+
Sbjct: 311 RADSVKNILERNGFTN---VEAVGKGAT------DSTGIRSQDRRAELV 350
>gi|265751268|ref|ZP_06087331.1| bacterial outer membrane protein [Bacteroides sp. 3_1_33FAA]
gi|263238164|gb|EEZ23614.1| bacterial outer membrane protein [Bacteroides sp. 3_1_33FAA]
Length = 377
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 48/107 (44%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
++ + Q V + + V + ++ LP ++ IAT LNK + +
Sbjct: 249 NQMLEECQKREPQVQTVVETAKTLESVVTFRQGKSSIDASQLPNVERIATYLNKHSNAKV 308
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
++ + G+++ N I+Q RA+ + + L+++ S I+ +G
Sbjct: 309 VVKGYASPEGSIEVNERIAQARANAVMNLLVKKYRISADRITAKGQG 355
>gi|189353747|ref|YP_001949374.1| putative OmpA family transmembrane protein [Burkholderia
multivorans ATCC 17616]
gi|189337769|dbj|BAG46838.1| putative OmpA family transmembrane protein [Burkholderia
multivorans ATCC 17616]
Length = 266
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Query: 78 VHVSFVSEVFLE---KKFLPMLQ-LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++ L+ L IA I + +T I + HTD IG+ ++N +S+ R
Sbjct: 149 EALFPFAKSSLDSMLPGGRAELDDAIAKIRAERGTTRIDVVGHTDRIGSDESNRALSRAR 208
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPID---TNDTKV---GRQNNQRIEIQI 182
A+ +K YL+ G+ + R I G P+ ++ Q ++R+ I +
Sbjct: 209 AETVKRYLVAHGLDAAR-IRTEGAGSSQPVSHCPPGESPAVIACLQKDRRVTITV 262
>gi|46398713|gb|AAS92042.1| IcmN protein [Legionella pneumophila]
Length = 112
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 2/107 (1%)
Query: 76 IPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
IP F + L +L +A L +F I + S++ ++K ++ R+
Sbjct: 1 IPASALFXDQSPRLNWASYSLLNEVAAFLKQFRKIAITVTSYSSKYVSVKRERALTLARS 60
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
V+ YL + +R I +G PI + R N R+EI
Sbjct: 61 RVVSEYLWSQ-GVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEIT 106
>gi|115350223|ref|YP_772062.1| flagellar motor protein MotB [Burkholderia ambifaria AMMD]
gi|115280211|gb|ABI85728.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 339
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ ++ + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELITGGMDESKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI + + R +
Sbjct: 267 NL--NKADPLDPENRRISVIVLNRKS 290
>gi|330722512|gb|EGH00335.1| PsaB [gamma proteobacterium IMCC2047]
Length = 55
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L+ ++ +G+ P TND+ GRQ N+R+ I
Sbjct: 1 MAVLVDEMDVDRDRLTAKGYGETQPRATNDSADGRQQNRRVTAVI 45
>gi|221202105|ref|ZP_03575140.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
gi|221209087|ref|ZP_03582082.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221171082|gb|EEE03534.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221177899|gb|EEE10311.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
Length = 338
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDQVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI + + R +
Sbjct: 267 NL--NKADPLDPENRRISVIVLNRKS 290
>gi|28275237|ref|NP_783492.1| outer membrane protein OmpA weak-like protein [Shewanella
oneidensis MR-1]
Length = 49
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+Q + + G P+ N + GRQ N+R+E+ I +
Sbjct: 1 MQGQGIQSNRLISLGKGESDPVANNKSASGRQQNRRVEVIITDK 44
>gi|86133957|ref|ZP_01052539.1| OmpA family protein [Polaribacter sp. MED152]
gi|85820820|gb|EAQ41967.1| OmpA family protein [Polaribacter sp. MED152]
Length = 370
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
S L + ++ + K + I+SHTD GT ++N +S RA + Y
Sbjct: 262 WDFSSATLNEGAKQIIDARLLPIVKD-GVAVFIESHTDMRGTKRDNQELSDRRAKAVTDY 320
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
LI + + + +GF ++ ++ N+R ++ +
Sbjct: 321 LISK-GINATQLYAKGFGETRLLNKCADGVVCSESEHAVNRRTTFRVVNQ 369
>gi|299773237|gb|ADJ38693.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 362
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILN----KFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + L+ L T + + P+ + + +TD IG NL +SQ+
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLENPA--VQVNGYTDRIGKDAANLTLSQK 299
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
RA+ + +Y++ + + ++ G+ P+ N
Sbjct: 300 RAETVANYIVSK-GVNPANVTAVGYGEANPVTGNTCDA 336
>gi|163744356|ref|ZP_02151716.1| outer membrane porin, OmpA/MotB family protein [Oceanibulbus
indolifex HEL-45]
gi|161381174|gb|EDQ05583.1| outer membrane porin, OmpA/MotB family protein [Oceanibulbus
indolifex HEL-45]
Length = 309
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 66/165 (40%), Gaps = 19/165 (11%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRIGDMITCYIPVH----VSFVSEV 86
+R S +D+ ++ ++ G + + + +T + +
Sbjct: 148 EAERRKSEIDRMAEDIAERITSDGELSDLARNVRLEKSNGALTVQVLDQDERSLFTRGSA 207
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN----LLISQERADVIKSYLI 142
+ K +L I ++ + + + I HTD+ NN +S +RA+ + L+
Sbjct: 208 EVTPKTRELLLAIGDVIAE-QNQPVEIIGHTDAATFGANNGYTNWELSADRANATRRTLM 266
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
G++ RF+ V G A PI+T D N+RI I++ +
Sbjct: 267 AAGINGARFMRVSGVADTQPINTIDPLA--AENRRISIRLVYQAE 309
>gi|94500541|ref|ZP_01307072.1| motility protein, MotA family protein [Oceanobacter sp. RED65]
gi|94427331|gb|EAT12310.1| motility protein, MotA family protein [Oceanobacter sp. RED65]
Length = 336
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 11/153 (7%)
Query: 45 SSLDK--AEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIA 100
+DK A + ++R G I + + L+ +L +A
Sbjct: 127 EVMDKINASATLTPYKDQLKVDITREGLRIQIVDKTNRPMFNPGSSRLKYYAEDILYEMA 186
Query: 101 TILNKFPSTVIAIQSHTDS----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
IL P+ I+I HTDS N +S RA+ + L G+ S + V G
Sbjct: 187 PILQAVPN-RISITGHTDSSGSANPWDTGNWELSAGRANAARRALADAGLDSEKIAQVVG 245
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
K + D N+RI I + + +
Sbjct: 246 MGDKAHFNIEDPTD--PVNRRIAIVVLNKRTEQ 276
>gi|330827372|ref|YP_004390610.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
K601]
gi|329312680|gb|AEB87094.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
Length = 351
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 55/150 (36%), Gaps = 6/150 (4%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ D + D + + + + + S L +
Sbjct: 198 AEADAIPAGSAQLTDDVRPVT--VVAVGPATAAPVAATASSSLRSLPFSSSVANLNDEAK 255
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
L + + + + I+ TDS GT+ N ++ RA +++ RG R +
Sbjct: 256 RNLSELLPL--AMTAERVLIRGRTDSTGTVAGNRALAIARAATVRAAFA-RGGVDPRKLK 312
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
V + + +NDT+ GR N+R+E+++
Sbjct: 313 VS-YCVTCFVASNDTEAGRSANRRVEVELV 341
>gi|114330218|ref|YP_746440.1| flagellar motor protein MotB [Nitrosomonas eutropha C91]
gi|114307232|gb|ABI58475.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91]
Length = 314
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 20/182 (10%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI----------VVSRIGD 70
+ + K L + ++ L+K + + + + ++ G
Sbjct: 101 SDFDDLKQSLDMDALQTLQDRVEREQLEKLKARIEDAINSNPVLNKFKSQLLLDITSEGL 160
Query: 71 MITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---- 124
I + + + + L+ +L I +LN + I++ HTD+
Sbjct: 161 RIQIVDEKNRPMFAIGKAELQPYTKMILHEIGKMLNDVGN-KISLSGHTDATPYPSGEKS 219
Query: 125 -NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+N +S +RA+ + LI G++ + + V G + D D+ N+RI I +
Sbjct: 220 YSNWELSADRANASRRELIAGGMNPEKMLRVVGLSSAVMFDKEDSFS--PFNRRISIIVM 277
Query: 184 PR 185
+
Sbjct: 278 NK 279
>gi|320537035|ref|ZP_08037014.1| OmpA family protein [Treponema phagedenis F0421]
gi|320146110|gb|EFW37747.1| OmpA family protein [Treponema phagedenis F0421]
Length = 165
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 5/132 (3%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + D T ++ L +IA L T
Sbjct: 39 QEQPIAEPQEAPVEEKEPETDGFTV-----YFAPDTYVIDSFTAHKLDVIAEQLKAQNIT 93
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ I H+ + T K +S +RA + Y G+ + + G P ++
Sbjct: 94 HVKITGHSAKLDTAKAENKLSLQRAVAVAEYFRSIGLFDADSMELEGLGANEPAGSHAEI 153
Query: 170 VGRQNNQRIEIQ 181
R N+R+EI+
Sbjct: 154 TKRHYNRRVEIK 165
>gi|323528401|ref|YP_004230553.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323385403|gb|ADX57493.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 233
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 13/171 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKKV-------FLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+ +F+ + S + K + ++ +
Sbjct: 43 TLMVLFLALYVLQLAKNSELQIKTLQHHPVKEAVEVQPPATTANANEAAKKQLLSLLAPL 102
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ I +S + I V F + L + +L IAT+L I ++ H
Sbjct: 103 QDNRQITISHTPQGVEIAINAKVLFNSGDARLLPESFAVLGQIATVLRDRAKNNILVEGH 162
Query: 117 TDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
TDS+ ++N +S RA + + R ++ G A +P+
Sbjct: 163 TDSLPIATAKYESNWELSSARAGAVVRFFADR-GIEAHRMAAIGRADNFPL 212
>gi|224824155|ref|ZP_03697263.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
gi|224603574|gb|EEG09749.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
Length = 302
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 55/147 (37%), Gaps = 14/147 (9%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + + ++ G I + + L +LQ + LN
Sbjct: 124 EQSAVLKAYKNQLQLEMTPEGLRIQIVDEQNRPMFDSGSANLLPHTRTILQELGKELNGV 183
Query: 107 PSTVIAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ ++I HTD+ +N +S +RA+ + L+ G+ ++ + V G A
Sbjct: 184 AN-RLSISGHTDAKPFGGAQHGYSNWELSADRANAARRELLAGGLMHDKILRVVGLAAAN 242
Query: 162 PIDTND--TKVGRQNNQRIEIQIFPRG 186
P+ ++ + N+RI I + +
Sbjct: 243 PLIRSNVFSPE----NRRIAIVVLNKE 265
>gi|325523982|gb|EGD02179.1| putative OmpA family membrane protein [Burkholderia sp. TJI49]
Length = 149
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 26/146 (17%)
Query: 2 IK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL----------- 47
+K L + ++GC V
Sbjct: 3 MKIATRLSVFALAGALLAGCATQQGNNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGA 62
Query: 48 ----------DKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSE-VFLEKKFLPM 95
+++ TG V+ D + +P V+F + + F P+
Sbjct: 63 LVGGVTGYNWQAIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPL 122
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIG 121
L +AT LN+ P +I +TDS G
Sbjct: 123 LNDLATTLNQNPQVTASIVGYTDSTG 148
>gi|87121902|ref|ZP_01077787.1| flagellar motor protein [Marinomonas sp. MED121]
gi|86162700|gb|EAQ63980.1| flagellar motor protein [Marinomonas sp. MED121]
Length = 304
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 59/177 (33%), Gaps = 16/177 (9%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH- 79
A+ + +V + D K E E + + + D I +
Sbjct: 111 ANSHRDQVAEQEQADLAAALG------KKFEGEKVFEAVKENLQIEITPDGIRVTLLDKQ 164
Query: 80 ---VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQER 133
+ L F + I +L+ + + + HTDS N +S R
Sbjct: 165 NKPMFAQGSGRLMPDFELAMVNIGQVLSGLNN-KLVVSGHTDSSAYSFAGLGNWELSAMR 223
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
A+ + L + G RF+ V G + P D D G N+R+ + + K+
Sbjct: 224 ANEARRLLREGGAGDTRFVQVMGLSDTAPYDRTDPAAG--INRRVSVLLLTDAAYKR 278
>gi|317480804|ref|ZP_07939888.1| OmpA family protein [Bacteroides sp. 4_1_36]
gi|316903027|gb|EFV24897.1| OmpA family protein [Bacteroides sp. 4_1_36]
Length = 377
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ + Q V + + V + ++ LP ++ IAT LNK +
Sbjct: 247 QLSQMLEECQKREPQVQTVVETAKTLESVVTFRQGKSSIDASQLPNVERIATYLNKHSNA 306
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ ++ + G+++ N I+Q RA+ + + L+++ S I+ +G I ++
Sbjct: 307 KVVVKGYASPEGSIEVNERIAQARANAVMNLLVKKYRISADRITAKGQG----IGNMFSE 362
Query: 170 VGRQNNQRIEI 180
N R+ I
Sbjct: 363 ADW--N-RVSI 370
>gi|153812960|ref|ZP_01965628.1| hypothetical protein RUMOBE_03367 [Ruminococcus obeum ATCC 29174]
gi|149830907|gb|EDM85997.1| hypothetical protein RUMOBE_03367 [Ruminococcus obeum ATCC 29174]
Length = 335
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 19/165 (11%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFL 93
+++ G D E + + I V + V F + L
Sbjct: 131 QQAQIDQIIGVKADVIE-ALKNEFSKNNINVDIDAQTGALTLEASVMFDYDQAELTDAGK 189
Query: 94 PMLQLI----ATILNKFPSTV----IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ I +L + I I +TD+ G NL +SQ+R+ + YL+
Sbjct: 190 QALEQILPIYCKVLLQDDYMKYLAEIIIDGYTDTDGDYSYNLQLSQQRSLAVAQYLLDIQ 249
Query: 146 VSS---------NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ ++++V G + P+ + V + ++R+E++
Sbjct: 250 GNFLDTTQSQNLEKYLTVNGHSMANPVLDANGNVDKDASRRVEVK 294
>gi|187478167|ref|YP_786191.1| flagellar motor protein MotB [Bordetella avium 197N]
gi|115422753|emb|CAJ49281.1| chemotaxis protein [Bordetella avium 197N]
Length = 324
Score = 51.2 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 56/135 (41%), Gaps = 10/135 (7%)
Query: 63 IVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I ++ G I + + ++ +L+ + +LN P+ ++I HTD+
Sbjct: 145 IDLTTEGLRIQIVDSQNRPMFATGSAQVQPYMRDILRELGPVLNDLPN-KVSISGHTDAT 203
Query: 121 GTLKN-----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ N +S +RA+ + L+ G++ + + ++G A I +D N
Sbjct: 204 QYARRERAYSNWELSTDRANASRQELVAGGMTEGKVMRIQGLASSMSIVKDDPYA--AVN 261
Query: 176 QRIEIQIFPRGNIKK 190
+RI + + ++
Sbjct: 262 RRISLVVLNEKTQRR 276
>gi|15887914|ref|NP_353595.1| flagellar motor protein MotB [Agrobacterium tumefaciens str. C58]
gi|15155508|gb|AAK86380.1| flagellar motor protein, PAL/OmpA family [Agrobacterium tumefaciens
str. C58]
Length = 433
Score = 51.2 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 61/173 (35%), Gaps = 14/173 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD------TGIVVSRIGDMITCY 75
+ E+ + + + D +E + Q+ G+VV+ +
Sbjct: 258 AAEQAALAKPNPDQASKASDAEWEKADTLREEIEKQISGITGKLSEGLVVTPAEGGLLLT 317
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA--IQSHTDSIGTLKNNLLI 129
I + + + + ++ I +L + +V+ G +N +
Sbjct: 318 ISDQAETPMFNIGSAVPRGELVLAMEKIGKLLQERGGSVVIRGHTDGRQFKGEANDNWRL 377
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S +RA L++ G+S R V GFA + ++ N+RIEI +
Sbjct: 378 SMDRAHSAYYMLVRGGLSEERVKQVSGFADRRLQVPSNPLAD--ANRRIEILL 428
>gi|323493924|ref|ZP_08099041.1| Outer membrane protein [Vibrio brasiliensis LMG 20546]
gi|323311865|gb|EGA65012.1| Outer membrane protein [Vibrio brasiliensis LMG 20546]
Length = 188
Score = 51.2 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 68/197 (34%), Gaps = 26/197 (13%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + ++ +++ + + + + V + L + E + + L +
Sbjct: 1 MKYPVIITSLLLSPLGYANCLGSVDEYITSTTLVSSHTVKTQVSGHLTQREAKSENTLLN 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSE-------------VFLEKKFLPMLQLIATILNKFP 107
+G V + V F + L +L+ ++
Sbjct: 61 SGRDV------VHSEAEDDVCFYDKETQSLVLNYGIDIYKLSPNHKQVLEQYLGLV--NN 112
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID--T 165
+ I I+ H DS+G+ N +S RA+ + YL NR + + PI T
Sbjct: 113 TAKIYIEGHADSLGSEGYNKALSARRANQVAKYLKSDLKQGNRIVE-HAYGESSPICNLT 171
Query: 166 NDTKVGRQNNQRIEIQI 182
++ G N+R+ I +
Sbjct: 172 QNSATG--CNRRVVITV 186
>gi|221209346|ref|ZP_03582327.1| OmpA family protein [Burkholderia multivorans CGD1]
gi|221170034|gb|EEE02500.1| OmpA family protein [Burkholderia multivorans CGD1]
Length = 277
Score = 51.2 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Query: 78 VHVSFVSEVFLE---KKFLPMLQ-LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++ L+ L IA I + +T I + HTD IG+ ++N +S+ R
Sbjct: 160 EALFPFAKSSLDSMLPGGRAELDDAIAKIRAERGTTRIEVVGHTDRIGSDESNRALSRAR 219
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPID---TNDTKV---GRQNNQRIEIQI 182
A+ +K YL+ G+ + R I G P+ ++ Q ++R+ I +
Sbjct: 220 AETVKRYLVAHGLDAAR-IRTEGAGSSQPVSHCPPGESPAVIACLQKDRRVTITV 273
>gi|86749921|ref|YP_486417.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86572949|gb|ABD07506.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 274
Score = 51.2 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 55/178 (30%), Gaps = 19/178 (10%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMIT 73
++ + A + LQD +V +
Sbjct: 88 AKTDNAALDQAGGAGSSAQAKAEREFALASASLRQALQDVPELSELSKNVVFEETPTGLN 147
Query: 74 CYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI----GTLKN 125
+ + ++ ++ +A L S + I HT + +
Sbjct: 148 LELTDQDGRPMFADGSSVPYERTRLLIAKLAAPLRAT-SLRVNIVGHTAATAVPANGDYD 206
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ +S RA+ ++ L + G+SSNR +SV G P+ N+R+ I +
Sbjct: 207 SFDLSTGRANAVRQILKREGLSSNRVMSVAGKGDGEPLFPEAPM--LAANRRVTISLL 262
>gi|126661870|ref|ZP_01732869.1| peptidoglycan-associated lipoprotein [Flavobacteria bacterium
BAL38]
gi|126625249|gb|EAZ95938.1| peptidoglycan-associated lipoprotein [Flavobacteria bacterium
BAL38]
Length = 260
Score = 51.2 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Query: 50 AEDEFQMQLQDT---GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
E E + Q++ + ++++GD + + + P+L+ + I+
Sbjct: 124 IEKEIVEEGQNSLVNQVSIAKVGDKLIL--KNLHFYNRSGNFVPESRPVLEELLKIMLDN 181
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
P+ I IQ H + ++ RA + +YLI + + +S + F PI
Sbjct: 182 PNLKIEIQGHIC-CQKGTDVEDTAKVRALAVYNYLINK-GINKNRLSYKSFGSSRPI 236
>gi|238762341|ref|ZP_04623312.1| Lateral flagellar proton motor protein B [Yersinia kristensenii
ATCC 33638]
gi|238699326|gb|EEP92072.1| Lateral flagellar proton motor protein B [Yersinia kristensenii
ATCC 33638]
Length = 302
Score = 51.2 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 9/136 (6%)
Query: 56 MQLQDTGIVVSRIGDMITCYIP--VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ + V G I + S L F +L +A N+ I I
Sbjct: 144 DAQSNLQMEVVPQGLRILIQDDKQRDMFQRSSAVLTPFFGRLLAELAPAFNEM-DNKIII 202
Query: 114 QSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
HTD+ N +S ERA + L++ G++ R + + A + +D +
Sbjct: 203 TGHTDASRYRDQVMYNNWNLSGERALMAHKALVKGGLTEGRVLQINAMADQMLLDPAEPL 262
Query: 170 VGRQNNQRIEIQIFPR 185
N+RIEI + +
Sbjct: 263 A--AKNRRIEIMVLTK 276
>gi|299133120|ref|ZP_07026315.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
gi|298593257|gb|EFI53457.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
Length = 345
Score = 51.2 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + LQ+IA +N+ P TV I+ HTD++G +NL +
Sbjct: 220 IDLDTINFETGSWDISPDQAAKLQVIADGMNRAIQHNPQTVFLIEGHTDAVGNDVDNLSL 279
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
S RA+ L Q+ ++ +G+ +Y +D
Sbjct: 280 SDRRAESAAELLTQQFGVPAENLTSQGYGEQYLKVPSDGPE 320
>gi|221214225|ref|ZP_03587197.1| flagellar motor protein [Burkholderia multivorans CGD1]
gi|221165880|gb|EED98354.1| flagellar motor protein [Burkholderia multivorans CGD1]
Length = 338
Score = 51.2 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDQVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI + + R +
Sbjct: 267 NL--NKADPLDPENRRISVIVLNRKS 290
>gi|121602153|ref|YP_989388.1| putative flagellar motor protein MotB [Bartonella bacilliformis
KC583]
gi|120614330|gb|ABM44931.1| putative flagellar motor protein MotB [Bartonella bacilliformis
KC583]
Length = 357
Score = 51.2 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 64/169 (37%), Gaps = 12/169 (7%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV--SRIGDMITCYIPVH- 79
+ + + K + ++ + + + + D + V I + + +
Sbjct: 186 KAETPLAFQKLAQENFPSQESIDFAKELTEFMKETVNDHHVSVYVEPIKEGVIIELMDQP 245
Query: 80 ---VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL---KNNLLISQER 133
+ V + + ++ +A I+ K VI I HTDS ++N +S R
Sbjct: 246 QREMFRVGSSLPTAETVEVIGEMAKIIAKHQGDVI-ISGHTDSRPYRSANRDNWQLSTAR 304
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A + L++ G+ R + V G+A + + D N+RI I I
Sbjct: 305 AQMAYYMLVRGGLDEKRILRVEGYADRDLKNKADPYA--AENRRISIFI 351
>gi|172059245|ref|YP_001806897.1| flagellar motor protein MotB [Burkholderia ambifaria MC40-6]
gi|171991762|gb|ACB62681.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 339
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDHVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELITGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI + + R +
Sbjct: 267 NL--NKADPLDSENRRISVIVLNRKS 290
>gi|121600109|ref|YP_994715.1| flagellar motor protein [Burkholderia mallei SAVP1]
gi|124386114|ref|YP_001027662.1| putative chemotaxis MotB protein [Burkholderia mallei NCTC 10229]
gi|121228919|gb|ABM51437.1| flagellar motor protein [Burkholderia mallei SAVP1]
Length = 245
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 53 EANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDV 112
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 113 PN-RIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 171
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + R +
Sbjct: 172 NL--NKADPLDPENRRISIIVLNRKS 195
>gi|320540573|ref|ZP_08040223.1| putative outer membrane protein A (3a;II*;G;d) [Serratia symbiotica
str. Tucson]
gi|320029504|gb|EFW11533.1| putative outer membrane protein A (3a;II*;G;d) [Serratia symbiotica
str. Tucson]
Length = 382
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L+ + T L+ + + +TD++G+ + N +S++RA
Sbjct: 253 SDVLFNFNKSTLKAECQQSLEQLYTQLSSMDPKDGSVIVLGYTDAVGSEQYNHKLSEKRA 312
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT--KVGRQ---------NNQRIEIQI 182
+ +LI + + IS RG N K GR ++R+EI++
Sbjct: 313 QSVVDFLISK-GIPSDKISARGLGKADSTTGNTCGYKSGRATKAQIDCLAPDRRVEIEV 370
>gi|198276293|ref|ZP_03208824.1| hypothetical protein BACPLE_02485 [Bacteroides plebeius DSM 17135]
gi|198270735|gb|EDY95005.1| hypothetical protein BACPLE_02485 [Bacteroides plebeius DSM 17135]
Length = 379
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 55/137 (40%), Gaps = 1/137 (0%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
E ++ D + + E E V + I + + + V+F
Sbjct: 221 NETINALRAENARKDEALGAKDAENARLEKELTDLRNAPKQVETIIQNTHSKSLESVVTF 280
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ + +P ++ IAT + P + ++I+ + G+ + N ++++RA+ +K+ L
Sbjct: 281 RQGKTTISTDQVPNVERIATYMKNNPKSTVSIKGYASPEGSAEVNARVAKQRAEAVKNML 340
Query: 142 IQRGVSSNRFISVRGFA 158
I + S I+ G
Sbjct: 341 ISKYKISASRITAEGQG 357
>gi|167587857|ref|ZP_02380245.1| flagellar motor protein MotB [Burkholderia ubonensis Bu]
Length = 340
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ ++ + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELISGGMDESKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI + + R +
Sbjct: 267 NL--NKADPLDPENRRISVIVLNRKS 290
>gi|32265616|ref|NP_859648.1| hypothetical protein HH0117 [Helicobacter hepaticus ATCC 51449]
gi|32261664|gb|AAP76714.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 238
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 79/218 (36%), Gaps = 38/218 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSND---TDIVNKRFGSSLDKAEDEFQMQ 57
M+ + + +F++ +S + + ++ + +H +++ + + ++ ++
Sbjct: 12 MMAGIMM-IFLLIMVSFMLITQKTQEDLKIHNQKLLELNQAMSEIAKNYSNLQQELYEAL 70
Query: 58 LQDTGIVVSR------IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI------LNK 105
L++ + R + I P + ++K+F +L L K
Sbjct: 71 LKEFSKDLKRWDAQIDEDNTIRFNEPEVLFDTGAAQVKKRFQDILNDFFPRYVKILSLPK 130
Query: 106 FPST--VIAIQSHTDSIGTLKNNLLI--------SQERADVIKSYLIQRGVSSN------ 149
F + I+ HT + + L SQ RA + Y +N
Sbjct: 131 FQDNIEEVRIEGHTSQSWYVAHTLEERYLGNAELSQARALEVLKYCFNLKSINNYKEWLI 190
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ G ++ P++ +D ++R+E ++ + N
Sbjct: 191 KVFRANGLSFAKPLEDDD------KSRRVEFRVVTKAN 222
>gi|262273510|ref|ZP_06051324.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
101886]
gi|262222488|gb|EEY73799.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
101886]
Length = 340
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 59/170 (34%), Gaps = 9/170 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC--YIPVH 79
E + +L + +++ + V G I
Sbjct: 127 QGENAMSVMEGQYLNAAQLSGLAIALKEIVASL-DAMENIHLDVVPQGLRIQIQDSKRNV 185
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI---GTLKNNLLISQERADV 136
+ + F +L ++ L K + +I I HTDS +N +S +RA
Sbjct: 186 MFQRGSAQMTPFFEDILYALSPKLGKIQNRLI-ISGHTDSTVFSTQAYSNWELSGDRALK 244
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ ++ G+ + + V A + +D D + G N+RIEI + +
Sbjct: 245 ARQVMVGSGLPQQQVLQVVAMADRTLLDEADPQSG--KNRRIEIMVLTKE 292
>gi|116255792|ref|YP_771625.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115260440|emb|CAK03544.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 649
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 8/125 (6%)
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
GI + ++ IPV ++F ++ Q + L + I + HTD
Sbjct: 523 GGIYSENVRGIVPVSIPVPITFDFNKSSFTSIGTEAAQELLEALKEQKPGRIILVGHTDR 582
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID----TNDTKVG-RQN 174
G N +S+ RA + +L G+ + I G P+D N T+
Sbjct: 583 RGGDDYNQKLSERRAQAVADFLKSNGLDAT--IDAEGRGASEPVDVTATANLTEDDVDAL 640
Query: 175 NQRIE 179
N+R+E
Sbjct: 641 NRRVE 645
>gi|58616261|ref|YP_195390.1| OmpA family protein [Azoarcus sp. EbN1]
gi|56315722|emb|CAI10366.1| OmpA family protein [Aromatoleum aromaticum EbN1]
Length = 201
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 71/193 (36%), Gaps = 16/193 (8%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG-- 62
L + + I + ++++ V+ ++ + + +G D A + +Q
Sbjct: 7 LNILLAAAAFIGATSVIAQDRHSVYPFEATEYEPSQFSYGVGQDTATTLIKRPVQKGETQ 66
Query: 63 -IVVSRIGDMITCYI---PVHVSFVSEVFLEKKF---------LPMLQLIATILNKFPST 109
+ + R S + L +P+ + + T
Sbjct: 67 WVEMERTPLRTASTSAKSDGTGSNTGDYDLIPGATVFFAFDSTVPLNPEVISSFQFGDDT 126
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I + TD IGT N ++ +RA + S +G+ ++ V + PI DT+
Sbjct: 127 KIRLIGRTDPIGTNSYNDRLAYKRAASVASLFKLKGMKQSQMELVS-LGARSPIAPTDTE 185
Query: 170 VGRQNNQRIEIQI 182
GRQ N+++ I++
Sbjct: 186 SGRQKNRQVLIEL 198
>gi|330966673|gb|EGH66933.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 301
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ L + L P+ I + H+D+ G N +S+
Sbjct: 171 VKQAEVGFPGGGIELDANAKARLDNMVAYLKADPTVNRIELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
RA + Y + + I++R +YP+ N
Sbjct: 231 RALAVMDYFKAQ-GIPEQQITLRFHGERYPLAPNT 264
>gi|206558533|ref|YP_002229293.1| flagellar motor protein MotB [Burkholderia cenocepacia J2315]
gi|198034570|emb|CAR50435.1| chemotaxis protein MotB [Burkholderia cenocepacia J2315]
Length = 339
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDRVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELISGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI + + R +
Sbjct: 267 NL--NKADPLDPENRRISVIVLNRKS 290
>gi|157960285|ref|YP_001500319.1| OmpA domain-containing protein [Shewanella pealeana ATCC 700345]
gi|157845285|gb|ABV85784.1| OmpA domain protein transmembrane region-containing protein
[Shewanella pealeana ATCC 700345]
Length = 346
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 41/111 (36%), Gaps = 3/111 (2%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L L + + VI + +D+ G + NL +S++R ++
Sbjct: 237 VLFGFDSSELNSTAKAKLDQVIKLSKSKDQDVILLNGQSDNQGDSQYNLKLSEKRVQHVE 296
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+YL+ + I + + + + R +R+ + + + ++
Sbjct: 297 AYLVS-HGVEVKKIDTQAVGEQD--AHANLRKDRALERRVIVTLTSQEKVQ 344
>gi|86136231|ref|ZP_01054810.1| hypothetical protein MED193_18949 [Roseobacter sp. MED193]
gi|85827105|gb|EAQ47301.1| hypothetical protein MED193_18949 [Roseobacter sp. MED193]
Length = 367
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 72/189 (38%), Gaps = 30/189 (15%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
E+ +V + L + D ++ + +V+S D + +
Sbjct: 153 ERLQVVNPLEAYLSQAIDQRREILVELRDRLLIEFPELQVVISPEQDALRFQ-GEGLFRS 211
Query: 84 SEVFLEKKFLPMLQLIATILNKF-------------PSTV--------IAIQSHTDSIGT 122
LE++ +++ + +L++ P + I+ HTDS
Sbjct: 212 GSPQLERRQRAIVETMGRLLDEILVCFTLGERAERGPDCESGNALIEAVQIEGHTDSDRG 271
Query: 123 LKNNLLISQERA--------DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+N+ +S RA + + L R + +SV G+ PI+TN+T G+
Sbjct: 272 RIDNVTLSTRRANETFFAIREEVAGILAHRNLRDQPVMSVSGYGEMRPIETNETTEGKAA 331
Query: 175 NQRIEIQIF 183
N+RI+++I
Sbjct: 332 NRRIDLRII 340
>gi|330877334|gb|EGH11483.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 301
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ L + L P+ I + H+D+ G N +S+
Sbjct: 171 VKQAEVGFPGGGIELDANAKARLDNMVAYLKADPTVNRIELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
RA + Y + + I++R +YP+ N
Sbjct: 231 RALAVMDYFKAQ-GIPEQQITLRFHGERYPLAPNT 264
>gi|21114987|gb|AAM42970.1| chemotaxis protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
Length = 89
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
DS +N +S +RA + LI GV ++ + F + P+D+N + R N+R
Sbjct: 13 DSNRRYADNWELSAQRALTVTRALIAEGVPASSVFAAA-FGSQQPVDSNADETRRAKNRR 71
Query: 178 IEIQIFPR 185
+EI PR
Sbjct: 72 VEIAPIPR 79
>gi|332881531|ref|ZP_08449180.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332680529|gb|EGJ53477.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 393
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 3/123 (2%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
T + E + V++ + V ++ ++ P
Sbjct: 253 TANKLRNEEQKSADLERALKECQNQGPKVITNNKKTLE---SVVTFRQGKIVIDASQQPN 309
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
++ IAT L + I + G+ + N I+ +RA+ +K+ L+ + R I+ +
Sbjct: 310 VERIATYLKNHKEAKVNILGYASPEGSAEVNERIANQRAEAVKNMLVNKYRIDARRITAK 369
Query: 156 GFA 158
G
Sbjct: 370 GQG 372
>gi|238563173|ref|ZP_04610426.1| flagellar motor protein [Burkholderia mallei GB8 horse 4]
gi|251767164|ref|ZP_04819981.1| putative chemotaxis MotB protein [Burkholderia mallei PRL-20]
gi|238521179|gb|EEP84632.1| flagellar motor protein [Burkholderia mallei GB8 horse 4]
gi|243063600|gb|EES45786.1| putative chemotaxis MotB protein [Burkholderia mallei PRL-20]
Length = 260
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 68 EANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDV 127
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 128 PN-RIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 186
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + R +
Sbjct: 187 NL--NKADPLDPENRRISIIVLNRKS 210
>gi|28871298|ref|NP_793917.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213970867|ref|ZP_03398990.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tomato
T1]
gi|301384498|ref|ZP_07232916.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. tomato Max13]
gi|302059911|ref|ZP_07251452.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. tomato K40]
gi|302130510|ref|ZP_07256500.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. tomato NCPPB 1108]
gi|28854548|gb|AAO57612.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. tomato str. DC3000]
gi|213924390|gb|EEB57962.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tomato
T1]
gi|331015672|gb|EGH95728.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. lachrymans str. M302278PT]
Length = 301
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ L + L P+ I + H+D+ G N +S+
Sbjct: 171 VKQAEVGFPGGGIELDANAKARLDNMVAYLKADPTVNRIELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
RA + Y + + I++R +YP+ N
Sbjct: 231 RALAVMDYFKAQ-GIPEQQITLRFHGERYPLAPNT 264
>gi|110632645|ref|YP_672853.1| flagellar motor protein MotB [Mesorhizobium sp. BNC1]
gi|110283629|gb|ABG61688.1| OmpA/MotB [Chelativorans sp. BNC1]
Length = 452
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 55/169 (32%), Gaps = 10/169 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
++ + + + + + VS + + + +
Sbjct: 283 SATAGEPDAPANEKANEAHENAAAGIRAALAQALNGEGLASSVTVSAGEEGVLISVTDDI 342
Query: 81 ----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQER 133
V E+ + ++ I L P T I I HTD+ + N +S R
Sbjct: 343 RNGMFPVGSAVPERALVGAMEKIGKTLAGQPGT-IRIHGHTDARPFRSDTYDNWRLSTAR 401
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A + LI+ G+ R V GFA + + N+RIEI +
Sbjct: 402 AHAAQYMLIRGGLDETRITEVAGFADRKLKEPESPLAD--ANRRIEILL 448
>gi|170737030|ref|YP_001778290.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169819218|gb|ACA93800.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 340
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 66/170 (38%), Gaps = 18/170 (10%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI------VVSRIGDMITC--YIPVH 79
V ++D + + +D G+ +V+ +G +
Sbjct: 124 VDEAGEVKRGQPMADSREAMDVLAERVRKLGKDAGVLDNVQAIVTPMGLRVMLHDTEKRG 183
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL------KNNLLISQER 133
V + F PML + ++ + + + HTDS+ ++N +S +R
Sbjct: 184 VFVSGGAVPSEPFRPMLIKLGALMGSIGN-PLFVMGHTDSVPYRNSDSGSRSNWDLSVDR 242
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A +S+++Q GV+S + + V G A + P+ N N+RIE +
Sbjct: 243 AMSARSWVLQGGVNSEQVMQVIGMADRAPLVNNPRA---AINRRIEFLVL 289
>gi|326334702|ref|ZP_08200909.1| immunoreactive antigen PG32 [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325693152|gb|EGD35084.1| immunoreactive antigen PG32 [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 391
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 48/119 (40%), Gaps = 1/119 (0%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ + E + + V+ + + V++ +E LP ++ I
Sbjct: 253 SESQRRIAQLERDLEEARNKKPQVIEKTITTSKKTLESVVTYRVGRTNIEPSQLPNVERI 312
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
AT L K+P++ + I+ + G L+ N ++ +RA +K L+ R + I G
Sbjct: 313 ATYLKKYPNSKVVIKGYASPEGNLEKNQKLAADRAQSVKKILVSRYKIAADRIQAEGNG 371
>gi|242237467|ref|YP_002985648.1| hypothetical protein Dd703_0007 [Dickeya dadantii Ech703]
gi|242129524|gb|ACS83826.1| conserved hypothetical protein [Dickeya dadantii Ech703]
Length = 248
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 50/225 (22%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++ L + +++ I ++ K D + + ++L Q + +D
Sbjct: 25 LMTSLMMIFLLISLI-------------YMIKVQDMVKIPTVYKNTLQGLGQALQHEFKD 71
Query: 61 TGIV---VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL-IATILN--KFPST----- 109
+ P + + L+ +F +L I LN P
Sbjct: 72 DLKRWHATIDEDLTVRFQEPNILFNNNSADLKPEFKAILDEFIPRYLNIITNPKYIDNIE 131
Query: 110 VIAIQSHTDSIGT--------LKNNLLISQERADVIKSYLIQRGVS---------SNRFI 152
I I+ HT ++ +N+ +SQ R Y++ V +
Sbjct: 132 EIRIEGHTSTVWRAGVSEKEAYIHNMELSQSRTRSTLEYIMNMSVVSEPESMFSWFKGHV 191
Query: 153 SVRGFAYKYPIDTN-------DTKVGRQNNQRIEIQIFPRGNIKK 190
GF+ P+D+ D R +QR+E ++ R N+++
Sbjct: 192 RAIGFSSARPVDSEGKVIISADKIEDRARSQRVEFRV--RTNVER 234
>gi|238793598|ref|ZP_04637221.1| Lateral flagellar proton motor protein B [Yersinia intermedia ATCC
29909]
gi|238727013|gb|EEQ18544.1| Lateral flagellar proton motor protein B [Yersinia intermedia ATCC
29909]
Length = 255
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 50/136 (36%), Gaps = 9/136 (6%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPV--HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ + V G I + S L F +L +A N+ I I
Sbjct: 97 DAQSNLQMEVVPQGLRILIQDDKQRDMFQRSSAVLTPFFNRLLAELAPAFNEM-DNKIII 155
Query: 114 QSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
HTD+ N +S ERA + L++ G+S R + + A + +D +
Sbjct: 156 TGHTDASRYRDQVLYNNWNLSGERALMAHKALVKGGLSEGRVLQINAMADQMLLDPAEPL 215
Query: 170 VGRQNNQRIEIQIFPR 185
N+RIEI + +
Sbjct: 216 A--AKNRRIEIMVLTK 229
>gi|254246760|ref|ZP_04940081.1| Flagellar motor protein [Burkholderia cenocepacia PC184]
gi|124871536|gb|EAY63252.1| Flagellar motor protein [Burkholderia cenocepacia PC184]
Length = 339
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELISGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI + + R +
Sbjct: 267 NL--NKADPLDPENRRISVIVLNRKS 290
>gi|107024396|ref|YP_622723.1| flagellar motor protein MotB [Burkholderia cenocepacia AU 1054]
gi|116688278|ref|YP_833901.1| flagellar motor protein MotB [Burkholderia cenocepacia HI2424]
gi|170731591|ref|YP_001763538.1| flagellar motor protein MotB [Burkholderia cenocepacia MC0-3]
gi|105894585|gb|ABF77750.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116646367|gb|ABK07008.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
gi|169814833|gb|ACA89416.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 339
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELISGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI + + R +
Sbjct: 267 NL--NKADPLDPENRRISVIVLNRKS 290
>gi|323143404|ref|ZP_08078089.1| putative outer membrane protein A [Succinatimonas hippei YIT 12066]
gi|322416809|gb|EFY07458.1| putative outer membrane protein A [Succinatimonas hippei YIT 12066]
Length = 329
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 42/115 (36%), Gaps = 10/115 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATIL--NKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L ++ + + + + + ++ +TD IG+ N +S++RA
Sbjct: 209 STLFPFDGSSLCEEGVKAVNDVVDSVNAKNIQNAAYDVKGYTDRIGSEAYNQTLSEKRAQ 268
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDT-------NDTKVGRQNNQRIEIQIF 183
+ L + ++V G P+ T N ++R+E+ +
Sbjct: 269 AVADQLQAA-GVAPEQLTVTGMGEADPVSTGCEGLRGNKLVDCLAPDRRVELSVT 322
>gi|153951751|ref|YP_001398162.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939197|gb|ABS43938.1| putative chemotaxis protein MotB [Campylobacter jejuni subsp.
doylei 269.97]
Length = 317
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 14/152 (9%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI- 99
+ G + E Q +L + I + I+ + L+ L+ I
Sbjct: 150 QNLGLIRENLSKELQSKLDNN-ITIDEKTGSISLSA-EVLFDKDSYVLKNGVKASLRKIL 207
Query: 100 ---ATILNKFPST-----VIAIQSHTDSIGTLKNNLLISQERADVIKSYLI--QRGVSSN 149
+ + P I I+ HTDS G+ NL +SQ+RA + +++ +
Sbjct: 208 SEYFDAILEDPKIFSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKFQ 267
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + G ++ P+ N + ++RIEI+
Sbjct: 268 KLLMASGRSFSDPVFVNG-VEDKDKSRRIEIK 298
>gi|78064833|ref|YP_367602.1| flagellar motor protein MotB [Burkholderia sp. 383]
gi|77965578|gb|ABB06958.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 338
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDNVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYSGGEGGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI + + R +
Sbjct: 267 NL--NKADPLDPENRRISVIVLNRKS 290
>gi|332882569|ref|ZP_08450181.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679369|gb|EGJ52354.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 399
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 62/165 (37%), Gaps = 5/165 (3%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLD---KAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
+ K + + + + L+ +A+ ++ + D+I
Sbjct: 236 KGKVANKQDKMNDANGNGIPDEIENYLNNNYQAKGGSAANNNNSDFSGDVVSDLIKKGYI 295
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + ++ L + I I + D +G N +SQ+RA+ +
Sbjct: 296 SAYFDFNSSTPQVSSTWAIDIVVKYLKENSGANILISGYADELGGTNYNSSLSQKRANAV 355
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
K L++ GVS++R IS G +D + ++ RQ +R +
Sbjct: 356 KDILVKAGVSASR-ISTEGKGEDTSVDKSSSRA-RQIARRATFSL 398
>gi|327193053|gb|EGE59965.1| chemotaxis motility protein [Rhizobium etli CNPAF512]
Length = 440
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 12/173 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYI 76
+ + +K + + +T+ K + + G+ V+ + I
Sbjct: 268 AEKNADHQKDADNSAAETERQKKEADELQQQIAQQIGGVAGKLAEGLTVTASEGGLLVSI 327
Query: 77 ----PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT---DSIGTLKNNLLI 129
+ + ++ + ++ I TIL + +AI+ HT G N +
Sbjct: 328 SDQNDDSMFNIGSAVPRQEMVLAMERIGTILKERGGA-VAIRGHTDGRQYKGGQNENWRL 386
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S +RA L++ G+ R V GFA + D N+RIEI +
Sbjct: 387 SMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLPADPF--NAANRRIEILV 437
>gi|296117473|ref|ZP_06836060.1| OmpA/MotB domain protein [Gluconacetobacter hansenii ATCC 23769]
gi|295975994|gb|EFG82785.1| OmpA/MotB domain protein [Gluconacetobacter hansenii ATCC 23769]
Length = 380
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 7/109 (6%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH------TDSIGTLKNNLLISQER 133
+ L ++ ++ + A +T I + + N +S R
Sbjct: 272 FFDWDKSTLTERARAIVAVAAQASTSTQTTRIEVNGYTDTSASHPGPQGEHYNQELSLRR 331
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A IK+ L+ R I + GF P+ N+R+EI +
Sbjct: 332 AQTIKAELV-RDGVPGPSIDIHGFGEANPLVPTGPNTREAQNRRVEIIL 379
>gi|254473231|ref|ZP_05086629.1| chemotaxis MotB protein [Pseudovibrio sp. JE062]
gi|211957952|gb|EEA93154.1| chemotaxis MotB protein [Pseudovibrio sp. JE062]
Length = 286
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 63/186 (33%), Gaps = 19/186 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRI 68
++K+ ++ T + A + Q+ I++
Sbjct: 93 ATESHPEKRKQGPEANTHTTKKADIEKPRQFATAAVSLRQAFQEMPEITEISNNIILEET 152
Query: 69 GDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----I 120
+ + I + + + +L +A +L K P+ + I HT +
Sbjct: 153 DEGLNILIVDQEGRSMYPEGSKYPYEITRRLLAKMAPVLAKLPN-RVRITGHTTTGQLIT 211
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ +S +RA+ + L + G+ SN SV G A P+ ND N+RI I
Sbjct: 212 SPSETGWELSADRANTARQILSEYGLPSNNIHSVVGKADTEPLFPNDPY--LAANRRISI 269
Query: 181 QIFPRG 186
+
Sbjct: 270 LLMAEE 275
>gi|171315861|ref|ZP_02905091.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171098957|gb|EDT43745.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 264
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 36/120 (30%), Gaps = 11/120 (9%)
Query: 77 PVHVSFVSEVFLE---KKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQE 132
+ + L+ L + + T I + HTD IG N +S+
Sbjct: 146 SDALFAFGKSSLDSMLPAGKAQLDDAIERIKRHKEITRIVVVGHTDRIGPSTVNEPLSRA 205
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ------NNQRIEIQIFPRG 186
RA + + + I G P+ R ++R+ I + R
Sbjct: 206 RAQTV-RGYLISHGLNGSIIDAEGVGSSQPVTHCPAGQSRAVIACLQPDRRVSISVSGRN 264
>gi|86356325|ref|YP_468217.1| flagellar motor protein MotB [Rhizobium etli CFN 42]
gi|86280427|gb|ABC89490.1| chemotaxis motility protein [Rhizobium etli CFN 42]
Length = 436
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 14/167 (8%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ ++KK K + + + G++VS
Sbjct: 278 AAGAEQQKKEAEQLQAQIAQQIGGVAG---KLAEGLTVTAAEGGLLVSISDQN-----DD 329
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT---DSIGTLKNNLLISQERAD 135
+ + ++ + ++ I TIL + +AI+ HT G N +S +RA
Sbjct: 330 SMFNIGSAVPRQEMVLAMEKIGTILKERGGA-VAIRGHTDGRQYKGGQNENWRLSMDRAQ 388
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L++ G++ R V GFA + D N+RIEI +
Sbjct: 389 SAYYMLVRGGLNETRVSQVSGFADRRLKLPADPF--NAANRRIEILV 433
>gi|85714482|ref|ZP_01045470.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
gi|85698929|gb|EAQ36798.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
Length = 318
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + LQ+IA +N+ PS V I+ HTD++G +NL +
Sbjct: 190 IDLDTINFETGSWDIPDDQAAKLQVIADGINRAISRNPSEVFLIEGHTDAVGNDVDNLSL 249
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA L Q+ + +G+ + D + N+R+ +I P
Sbjct: 250 SDRRAQSAAELLTQQFQVPPENLVTQGYGEQNLKVQTDGPS--RENRRVTARRITP 303
>gi|330957747|gb|EGH58007.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 301
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
+ L+ L + L P+ I + H+D+ G N +S+
Sbjct: 171 IKQAEIGFPGGGIELDAAAKARLDNMVAYLKADPTVNRIELDGHSDNSGNRLTNRDLSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
RA + Y + + I++R +YP+ N
Sbjct: 231 RALAVMDYFKAQ-GVPEQQITLRFHGERYPLAPNT 264
>gi|313149002|ref|ZP_07811195.1| predicted protein [Bacteroides fragilis 3_1_12]
gi|313137769|gb|EFR55129.1| predicted protein [Bacteroides fragilis 3_1_12]
Length = 445
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 2/124 (1%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK-F 92
+ I R + + Q D V + +P +L +
Sbjct: 297 TEDSIEKNRMKQEIASLNMQLQQAQTDAKERVESNPVLGFNELPPVYFKRGSAYLNVALY 356
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L I L K+P + + + D G N IS +RA+ + + +++ ++ I
Sbjct: 357 KNELSRIVETLKKYPDLKVILLGYADHTGNPDINQKISLQRAE-VLAAYLEKKGIDSKRI 415
Query: 153 SVRG 156
+V+G
Sbjct: 416 NVKG 419
>gi|255011191|ref|ZP_05283317.1| hypothetical protein Bfra3_18764 [Bacteroides fragilis 3_1_12]
Length = 435
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 2/124 (1%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK-F 92
+ I R + + Q D V + +P +L +
Sbjct: 287 TEDSIEKNRMKQEIASLNMQLQQAQTDAKERVESNPVLGFNELPPVYFKRGSAYLNVALY 346
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L I L K+P + + + D G N IS +RA+ + + +++ ++ I
Sbjct: 347 KNELSRIVETLKKYPDLKVILLGYADHTGNPDINQKISLQRAE-VLAAYLEKKGIDSKRI 405
Query: 153 SVRG 156
+V+G
Sbjct: 406 NVKG 409
>gi|298208185|ref|YP_003716364.1| hypothetical protein CA2559_08086 [Croceibacter atlanticus
HTCC2559]
gi|83848106|gb|EAP85976.1| hypothetical protein CA2559_08086 [Croceibacter atlanticus
HTCC2559]
Length = 366
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 9/158 (5%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
D + + E Q ++ V + L
Sbjct: 212 KDAGTTEETVAAKYKTVTKEVLKQKGGLTTWAEVDCKLLEYTDLNIVWNLGSASLTNAAK 271
Query: 94 PMLQ-LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+ + ++ + + I SHTDS GT +N +S+ RA + +YLI + ++ I
Sbjct: 272 AEIDAKLLPVMQQ--GVSVEIASHTDSRGTASSNQALSERRAQAVTNYLISK-GINSSKI 328
Query: 153 SVRGFAYKYPIDTND-----TKVGRQNNQRIEIQIFPR 185
+ G+ + T+ N+R + ++
Sbjct: 329 TSNGYGESKLRNRCADGVSCTEREHTLNRRTQFRVIEN 366
>gi|161520074|ref|YP_001583501.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|160344124|gb|ABX17209.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
Length = 277
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Query: 78 VHVSFVSEVFLE---KKFLPMLQ-LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ ++ L+ L IA I + +T I + HTD IG+ ++N +S+ R
Sbjct: 160 EALFPFAKSSLDSMLPGGRAELDDAIAKIRAERGTTRIDVVGHTDRIGSDESNRALSRAR 219
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPID---TNDTKV---GRQNNQRIEIQI 182
A+ +K YL+ G+ + R I G P+ ++ Q ++R+ I +
Sbjct: 220 AETVKRYLVAHGLDAAR-IRTEGAGSSQPVSHCPPGESPAVIACLQKDRRVTITV 273
>gi|226939541|ref|YP_002794614.1| RmpM [Laribacter hongkongensis HLHK9]
gi|226714467|gb|ACO73605.1| RmpM [Laribacter hongkongensis HLHK9]
Length = 210
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 75/213 (35%), Gaps = 33/213 (15%)
Query: 2 IK---ELGLS-MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-----SSLDKAED 52
+K ++ L + +S + +L +V + + DKA+D
Sbjct: 1 MKTTNKIKLGGLTGALLVSLFSANAFAAHPGYLDDQATGSVVRNSYNECWRTAYFDKAKD 60
Query: 53 EFQM----QLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ + V + T + V F + + + L +A +
Sbjct: 61 GLVECGDAEAKAAPAPVVAVPVKETLSLSAEVLFGFDKSTVTPEGKQALVDVANKIKSKG 120
Query: 108 STV--IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+ + + + +TD IGT K N+ +S+ RA +K+ ++ + I+ G ++
Sbjct: 121 AKLQGVEVLGYTDYIGTEKYNMALSERRAAAVKN-VLVEMGADPAKITSAGRGE---LND 176
Query: 166 NDTKVGRQN-------------NQRIEIQIFPR 185
+ R ++R++++I +
Sbjct: 177 KTAQECRAKKQSYKQLKACLAPDRRVDVEITAQ 209
>gi|59714403|ref|YP_207177.1| outer membrane protein [Vibrio fischeri ES114]
gi|59482680|gb|AAW88289.1| outer membrane protein [Vibrio fischeri ES114]
Length = 182
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 73/192 (38%), Gaps = 17/192 (8%)
Query: 2 IK--ELGLSMFIMTTISGCGLASRE----KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+K + + +S C + + ++ + + +K+ + K + +
Sbjct: 1 MKYSKFLFVGTLAVLVSACSNTPPDIHGREAQINDIQQETINAQSKQIAALNYKVQQLVE 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
I V+ + + VS++ + + + A +T I +
Sbjct: 61 NNFPSPMISVTPRLYQVY-----YPYNVSKLTVTPELRYSILKDAKQ-----ATRINLLG 110
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
TD + ++ ++ RA ++ Y + I V + D N +++GR+NN
Sbjct: 111 RTDGVRPTDSDKKVAMARAMFLRDYFVHN-GIDPTLIYVNYASATDYADNNWSRIGRKNN 169
Query: 176 QRIEIQIFPRGN 187
+R+EI+I+PR
Sbjct: 170 RRVEIEIYPREE 181
>gi|300722595|ref|YP_003711885.1| flagella protein [Xenorhabdus nematophila ATCC 19061]
gi|297629102|emb|CBJ89687.1| enables flagellar motor rotation, linking torque machinery to cell
wall [Xenorhabdus nematophila ATCC 19061]
Length = 333
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
L + + + D G+ + I + + +E +LQ IA ILN
Sbjct: 130 LKELRPHLLIDMMDEGLRIQ-----IIDRENRPMFMIGSAKVESYMSDILQAIAPILNDI 184
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK- 160
P+ I++ HTDS+ +N +S +RA+ + L+ G+ + + V G A
Sbjct: 185 PN-KISLSGHTDSLKYANGQRGYSNWELSSDRANASRRELLVGGLDEVKILRVVGMASTV 243
Query: 161 ---YPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
ID N N+RI I + + K+
Sbjct: 244 SMQKGIDPNAP-----VNRRISIIVLNKEAEKR 271
>gi|293607844|ref|ZP_06690158.1| chemotaxis protein MotB [Achromobacter piechaudii ATCC 43553]
gi|292813756|gb|EFF72923.1| chemotaxis protein MotB [Achromobacter piechaudii ATCC 43553]
Length = 340
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 72/189 (38%), Gaps = 20/189 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI----------VVSRI 68
+ + +S +R L+ + + ++ + + ++
Sbjct: 104 SEGDVRRGQGNRVESQPMGDAERREQHRLENLKKRLENVIETSPVLKSFRPQMLIDLTTE 163
Query: 69 GDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-- 124
G I + + ++ +L+ + +LN+ P+ ++I HTD+ +
Sbjct: 164 GLRIQIIDNQNRPMFATGRAEVQPYMRDILRELGPVLNELPN-KVSISGHTDASQYARGE 222
Query: 125 ---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+N +S +RA+ + L+ G++ ++ + ++G + + +D N+RI +
Sbjct: 223 RAYSNWELSADRANASRQELVAGGMNESKVMRIQGLSSSMSLVKDDPYA--AVNRRISLV 280
Query: 182 IFPRGNIKK 190
+ K+
Sbjct: 281 VLNMNTQKR 289
>gi|304413521|ref|ZP_07394994.1| flagellar motor component [Candidatus Regiella insecticola LSR1]
gi|304284364|gb|EFL92757.1| flagellar motor component [Candidatus Regiella insecticola LSR1]
Length = 326
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 9/138 (6%)
Query: 59 QDTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI- 113
+ + + + + I + +S L F +L +A +LN + VI
Sbjct: 150 AQSNLNIEMVPQGLRILIQDDKKREMFPLSSALLTPFFTRLLAELAPVLNDLNNKVIITG 209
Query: 114 --QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
L NN +S ERA + L + G+ + + A + + +G
Sbjct: 210 HTDGARYRDQELYNNWNLSGERAMAARRALERGGLDDAHILQINAMADQMLL-DEKDPLG 268
Query: 172 RQNNQRIEIQIFPRGNIK 189
N+RIEI + + +
Sbjct: 269 -AANRRIEIMVLTKAATE 285
>gi|241203119|ref|YP_002974215.1| flagellar motor protein MotB [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857009|gb|ACS54676.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 443
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 63/174 (36%), Gaps = 13/174 (7%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD---TGIVVSRIGDMITCY 75
+ +K + +T+ ++ L + + G+ V+ +
Sbjct: 268 AQKDADHQKDADKSAAETEQQQQKEAEQLQAQIAQQIGGVAGKLAEGLTVTASEGGLLVS 327
Query: 76 I----PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT---DSIGTLKNNLL 128
I + + ++ + ++ I IL + +A++ HT GT N
Sbjct: 328 ISDQTDDSMFNIGSAVPRQEMVLAMEKIGAILKERGGA-VAVRGHTDGRQYKGTQNENWR 386
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S +RA L++ G+ R V GFA + +D N+RIEI +
Sbjct: 387 LSMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLPSDPF--NATNRRIEILV 438
>gi|296447841|ref|ZP_06889753.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
gi|296254641|gb|EFH01756.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
Length = 209
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 64 VVSRIGDMITCYIPVHV---SFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTD 118
V++I +++ + ++ L +++ + L + I HTD
Sbjct: 79 EVTQIDEIVATRREIDFEVNFALNSADLRDSDRKVVEQLGVALGEPALKGGTFLIMGHTD 138
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ G+ K N +S+ RA+ +K L+ + + G+ + + ND N+R+
Sbjct: 139 ARGSAKLNQKLSERRANAVKKVLVAEYGVAPERLVAVGYGQTHLKNPNDGFA--SENRRV 196
Query: 179 EIQ 181
++
Sbjct: 197 QVV 199
>gi|284038865|ref|YP_003388795.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283818158|gb|ADB39996.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 145
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ G ++ I + S L L +A +L + P+ + + +TD IG + N
Sbjct: 26 QTGALLPLSITILYFDQSSPVLRPGVKTTLDSLAQVLVEQPALIATVTGYTDLIGKRELN 85
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
L +++ RA + SYL QRGV +R I T ++ +R+ +Q+ PR
Sbjct: 86 LALAEYRAKAVGSYLAQRGVRKDRII-ANWEGPDKKATTTGSEGVNTIGRRVVVQLLPRE 144
Query: 187 N 187
Sbjct: 145 Q 145
>gi|170703865|ref|ZP_02894555.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170131226|gb|EDS99863.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 339
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELITGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI + + R +
Sbjct: 267 NL--NKADPLDPENRRISVIVLNRKS 290
>gi|329298550|ref|ZP_08255886.1| OmpA/MotB domain-containing protein [Plautia stali symbiont]
Length = 319
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 64/185 (34%), Gaps = 20/185 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVS 66
G G +KK + + + L++ ++ ++ I +
Sbjct: 85 GGGDDPTQKKGEVQKQVDMDAQKRQLDDIRLNRLREKLDQLIEADPRLKALRPHLIINMV 144
Query: 67 RIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
G I + +E +L++IA +LN P+ I++ HTD
Sbjct: 145 EEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRVIAPLLNDIPN-KISLSGHTDDFQYAS 203
Query: 125 -----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+N +S +RA+ + L+ G+ + + V G A + N+RI
Sbjct: 204 GDRGYSNWELSADRANASRRELVAGGLDGGKMLRVVGMADTMKLKNRG--ANDAVNRRIS 261
Query: 180 IQIFP 184
+ +
Sbjct: 262 LLVLN 266
>gi|171322726|ref|ZP_02911473.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171091928|gb|EDT37395.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 339
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELISGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI + + R +
Sbjct: 267 NL--NKADPLDPENRRISVIVLNRKS 290
>gi|302340145|ref|YP_003805351.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301637330|gb|ADK82757.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 343
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHT 117
Q+ V+ V ++ L + L++ L ++ S ++I+ H
Sbjct: 215 QEPTAPVTASAFRSVEKRAVIYFHPNDSELTAEAQTQLRVFGRQLREWNSIDAVSIEGHC 274
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+GT K + +S+ERA+ + ++ + +S++ FA + P ++ N+R
Sbjct: 275 ALLGTEKGRIELSRERAEN-SAAFLETIGIPAQGVSLQWFAGERPA--TRDPDKQELNRR 331
Query: 178 IEI 180
+EI
Sbjct: 332 VEI 334
>gi|170693360|ref|ZP_02884520.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170141890|gb|EDT10058.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 230
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 57/171 (33%), Gaps = 13/171 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR-------FGSSLDKAEDEFQMQ 57
+ +F+ + S + + H+ + + ++ +
Sbjct: 40 TLMVLFLALYVLQLAKNSELQIQTLQHRPVKEAVDVEPPITAANAKDAAKKQLLSLLAPL 99
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ I +S + I V F + L + +L IA +L I ++ H
Sbjct: 100 QDNRQITISHTPQGVEIAINAKVLFNSGDARLLPESFAVLDRIAAVLRDRAKNNILVEGH 159
Query: 117 TDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
TDS+ ++N +S RA + + + ++ G A +P+
Sbjct: 160 TDSLPIATAKYESNWELSSARAGAVVRFFADK-GIEAHRMAAIGRADNFPL 209
>gi|237743864|ref|ZP_04574345.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|229432895|gb|EEO43107.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
Length = 232
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 16/145 (11%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQL---IATILNKFPS 108
+ Q ++ GI V T I + F E L+ + L I L
Sbjct: 68 KIQKDFEERGIKVDLDPQTGTIKIDDKILFNTGEYLLKPEGKKYLNEFVPIYINLLLNDE 127
Query: 109 ------TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN------RFISVRG 156
+ I I+ HTD +G+ N+ +SQ+RA + Y+ + R+I+ G
Sbjct: 128 QVKKELSQIIIEGHTDDVGSYIYNMELSQKRAFEVIKYIYDEMPNFKGKEELKRYITANG 187
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + N + R ++R+E Q
Sbjct: 188 RSNIKVLRDNSGNIDRDKSRRVEFQ 212
>gi|317151983|ref|YP_004120031.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316942234|gb|ADU61285.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 241
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 4/137 (2%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
D D+ D + + D + + F L + +L+ + +L F
Sbjct: 97 DVLPDDLSKAELDKNLEILAKPDGVALVFTDKLLFEPGASRLSLRGEQLLEALTPVLL-F 155
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ + + HTD+ T + +S +RA + S+L+ +R S+ + P
Sbjct: 156 TAAPVNVAGHTDASDTGADPYALSGDRALAVLSFLVDA-GVPDRRFSLSAYGSDVPALDE 214
Query: 167 DT-KVGRQNNQRIEIQI 182
V N+R+EI +
Sbjct: 215 RDRPVASSMNRRVEILL 231
>gi|83648052|ref|YP_436487.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
gi|83636095|gb|ABC32062.1| Flagellar motor protein [Hahella chejuensis KCTC 2396]
Length = 328
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 65/185 (35%), Gaps = 19/185 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRI 68
+++ +V + + D+ + L + E Q++ + ++
Sbjct: 90 AGKPQDQPEVRMREDTIQDLAAQLEQQKLTQLMQEIMAQIEKNPKLNAFKDQLLLDITDE 149
Query: 69 GDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT---- 122
G I + L+ F +L +A + K + I++ HTD+
Sbjct: 150 GLRIQIVDKRQRPMFDSGRSELQPYFEEILFELAKSIAKVRN-KISVSGHTDAQPFLGRD 208
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S +RA+ + L++ G+ R V G A + N+RI I +
Sbjct: 209 NYSNWELSADRANAARRALVEGGLPEGRMARVVGLASSV-LFDEKDPYN-PVNRRISILV 266
Query: 183 FPRGN 187
+
Sbjct: 267 LNKKT 271
>gi|27375465|ref|NP_766994.1| hypothetical protein blr0354 [Bradyrhizobium japonicum USDA 110]
gi|27348602|dbj|BAC45619.1| blr0354 [Bradyrhizobium japonicum USDA 110]
Length = 250
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 7/156 (4%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ K S ++ ++ V++ I I +
Sbjct: 90 APQADPAPSASETKLIQSVRGRSTRSLSSTEREEIASVAKDKPNIDLEIT---FDYNSAN 146
Query: 88 LEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
+ K L +Q + L + + HTD+ G N +S+ RAD IK YL+++
Sbjct: 147 ISTKSLASVQALGRALTSPDLKGSTFVVAGHTDAAGGESYNQDLSERRADAIKRYLVEKY 206
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S + G+ D + + N+R+++
Sbjct: 207 SISATDLVTVGYGKSKLKDPSQPMA--EVNRRVQVV 240
>gi|213964189|ref|ZP_03392425.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
gi|213953156|gb|EEB64502.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
Length = 399
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 58/171 (33%), Gaps = 9/171 (5%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI-------GDM 71
+ K +V ++ D R ++ ++ + D+
Sbjct: 230 SNVADLKGEVANKQNRMNDANGNRIPDEIESYLNDNYQAKAGNAVANDSDVASGDVAADL 289
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + + + + + + P+ I + + D +G N +SQ
Sbjct: 290 IRKGYISAYFDFNSSEPQVSSSWSIDFVGKYMKENPNAHITVNGYADELGGTNYNTTLSQ 349
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+RAD +K+ L+ + I+ +G +D N + RQ ++ ++
Sbjct: 350 KRADAVKN-LLVKAGIDANRITAQGKGVDNSVDKN-SPKARQLARKATFEL 398
>gi|262341165|ref|YP_003284020.1| OmpA/MotB domain-containing protein [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272502|gb|ACY40410.1| OmpA/MotB domain-containing protein [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 413
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 24/150 (16%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
D + DK +F + V + + + L + L +
Sbjct: 283 PDTDSDNVPDYEDKCPKKFGKKENQGCPDVV---------FSPILFDLGKFALTPRSLSI 333
Query: 96 LQLIATIL-NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+ IA I+ N P++ I +TDS G L N +S +RA+ + LI +GV S+R I V
Sbjct: 334 VNEIAEIIINSLPNSKFYIDGYTDSHGKLSYNKTLSLKRANSVFEALISKGVDSSR-IEV 392
Query: 155 RGF--AYKYPIDTNDTKVGRQNNQRIEIQI 182
RG + +R+EI I
Sbjct: 393 RGLVGGKYK-----------KKGRRVEITI 411
>gi|217076142|ref|YP_002333858.1| chemotaxis protein MotB, putative [Thermosipho africanus TCF52B]
gi|217035995|gb|ACJ74517.1| chemotaxis protein MotB, putative [Thermosipho africanus TCF52B]
Length = 217
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 59/154 (38%), Gaps = 16/154 (10%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIAT-----I 102
K +E +D + + + I + F ++ L K +L + I
Sbjct: 53 KIVEELVNTFKDLDLEIQVDPNSGAIIINNDILFNYNDYTLSTKGKNILLKVIKTYLNVI 112
Query: 103 LNKFPSTVI---AIQSHTDSIGTLKNNLLISQERADVIKSYLIQR------GVSSNRFIS 153
L T I ++ ++D GT + N+ +S +RA + YL + + +
Sbjct: 113 LKPEYETYIAEFYLEGNSDPTGTYEYNIDLSMKRAFEVFKYLRENLDEIPYQELFFKKLV 172
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
V G Y PI N K+ ++R+E++ +
Sbjct: 173 VSGKGYNNPIIENG-KINYTKSRRVELKFTLKDQ 205
>gi|46397588|gb|AAS91725.1| OmpA [Bibersteinia trehalosi]
Length = 364
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 59/166 (35%), Gaps = 15/166 (9%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI---PVHVSFVSEVF 87
++ ++ + R+ + V +++T + +
Sbjct: 192 AEAKAGNVTDLRYSPDAHSVSAGLTYRFGQGAAPVVAEPEIVTKNFAFSSDVLFDFGKAN 251
Query: 88 LEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L + + I + +TD IG NL +SQ RA+ + +Y++ +
Sbjct: 252 LKPAAAASLDAAHAEIQNLGLAAPAIQVNGYTDRIGKDAPNLALSQRRAESVANYMVSK- 310
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ I+ G+ P+ N GR ++R+E+Q+
Sbjct: 311 GVAPESITAVGYGKANPVTGNTCDAVKGRKALIACLAPDRRVELQV 356
>gi|83952036|ref|ZP_00960768.1| Outer membrane protein, OmpA/MotB family protein [Roseovarius
nubinhibens ISM]
gi|83837042|gb|EAP76339.1| Outer membrane protein, OmpA/MotB family protein [Roseovarius
nubinhibens ISM]
Length = 667
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 44/117 (37%), Gaps = 7/117 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLL 128
+ + L+ + +++ P+ V ++ HTD++G+ NL
Sbjct: 545 VIELEAINFATDSAAITASEAEELRALGLAMSELIERNPNEVFLVEGHTDAVGSASYNLA 604
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
+S RA+ + L + + V+G+ T + N+R + +I P
Sbjct: 605 LSDRRAESVALALTEYFDVPPENMVVQGYGEANLKI--RTPGPERQNRRATVRRITP 659
>gi|85710173|ref|ZP_01041238.1| flagellar motor component [Erythrobacter sp. NAP1]
gi|85688883|gb|EAQ28887.1| flagellar motor component [Erythrobacter sp. NAP1]
Length = 319
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 19/159 (11%)
Query: 43 FGSSLDKAEDEFQMQLQDT--------GIVVSRIGDMITCYIPVH----VSFVSEVFLEK 90
LD+ ++ L + V R D I + + + L +
Sbjct: 128 ETERLDRLREQIDEALAQRRQISHLARQVKVMRAPDGIRIDLVDDADFSMFALGTTILTQ 187
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGV 146
+L++I +L + T + ++ HTDS+ NN +S RA+ + LI G+
Sbjct: 188 DARGLLEVIGEVL-EAQRTPLILRGHTDSLPWRDGITANNWSLSAGRAEATRQALIASGL 246
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+NRF + G A P+ ++ R N+RI + + +
Sbjct: 247 EANRFARIEGVADTEPLIADNPADPR--NRRISLLLLEQ 283
>gi|313683484|ref|YP_004061222.1| hypothetical protein Sulku_2362 [Sulfuricurvum kujiense DSM 16994]
gi|313156344|gb|ADR35022.1| hypothetical protein Sulku_2362 [Sulfuricurvum kujiense DSM 16994]
Length = 238
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/224 (16%), Positives = 74/224 (33%), Gaps = 49/224 (21%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+ L + +++ I ++ K D+ V + + + + +
Sbjct: 22 MMTSLMMLFLLISVI-------------YMIKVQDSVKVPQIYKETTQGLNHALKKEFDK 68
Query: 61 TGIV---VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL-----IATILNK---FPST 109
+ V + P + L +F +L + +++K
Sbjct: 69 DLMKWGAVIDKDLTVRFQQPDILFATGSSALTPRFKEILDDFFIRYLKIMMSKPFINNIE 128
Query: 110 VIAIQSHTDSIGT--------LKNNLLISQERADVIKSYLIQRGVSS---------NRFI 152
I I+ HT S+ N+ +SQER Y++ + R
Sbjct: 129 EIRIEGHTSSMWEGESDRGKAYFKNMTLSQERTRATLEYIMTSDKINLTGEQKEWLMRHF 188
Query: 153 SVRGFAYKYPIDTNDT------KVGRQNNQRIEIQIFPRGNIKK 190
S GF+ +P+ T Q +QR+E ++ R NI++
Sbjct: 189 SAIGFSSGHPLTNKGTYLVDGESEDSQLSQRVEFRV--RTNIER 230
>gi|295110189|emb|CBL24142.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Ruminococcus obeum A2-162]
Length = 331
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 61/162 (37%), Gaps = 19/162 (11%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPML 96
+++ G D E + + I V + V F + L L
Sbjct: 134 QIDQIIGVKADVIE-ALKNEFSKNNINVDIDAQTGALTLEASVMFDYDQAELTDSGKQAL 192
Query: 97 QLI----ATILNK--FPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ I +L + + I I +TD+ G NL +SQ+R+ + YLI +
Sbjct: 193 EQILPIYCKVLLQDDYKDYLAEIIIDGYTDTDGDYSYNLQLSQQRSLAVAQYLIDIQGNF 252
Query: 149 ---------NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++++V G + P+ D V + ++R+E++
Sbjct: 253 LNDEQSQELEKYLTVNGHSMANPVLDADGNVDKDASRRVEVK 294
>gi|85715414|ref|ZP_01046396.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
gi|85697835|gb|EAQ35710.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
Length = 276
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 60/180 (33%), Gaps = 15/180 (8%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITC 74
++ + ++ F + Q + I+ + +
Sbjct: 91 STTPTPDEQERFKTAGARLKTDREFALASASLRQALQDMPELTELSKHIMFEETKEGLNL 150
Query: 75 YIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGTLKNN 126
I + ++ ++ +A L P I+I HT S + + +
Sbjct: 151 EIVDQDGRSMFAEGSKEPYERTRMLIGKLAAPLTATP-FRISITGHTASNFVPMRSDYDG 209
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S +RA+V++ L Q G+ + +V G + P+ +D N+R+ I +
Sbjct: 210 FDLSADRANVVRQILEQEGLPPSHIFAVSGKSDSMPLFPDDP--SLAANRRVTITLMREA 267
>gi|170739168|ref|YP_001767823.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
gi|168193442|gb|ACA15389.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
Length = 213
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + K LP+++++ L+ + +VI I HTD+ G+ N ++S+ RA+
Sbjct: 99 DVPFAYNSAQIGPKALPVVKVLGATLSRPQMSGSVILIVGHTDANGSDHGNQVLSERRAE 158
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+K Y++ + G+ ++ D N+R+
Sbjct: 159 AVKQYIVHNYGVPAANLVAVGYGKRHLKDAARPTA--PENRRV 199
>gi|46397578|gb|AAS91717.1| OmpA [Bibersteinia trehalosi]
gi|46397583|gb|AAS91721.1| OmpA [Bibersteinia trehalosi]
Length = 364
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 59/166 (35%), Gaps = 15/166 (9%)
Query: 31 HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI---PVHVSFVSEVF 87
++ ++ + R+ + V +++T + +
Sbjct: 192 AEAKAGNVTDLRYSPDAHSVSAGLTYRFGQGAAPVVAEPEIVTKNFAFSSDVLFDFGKAN 251
Query: 88 LEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
L+ L + + I + +TD IG NL +SQ RA+ + +Y++ +
Sbjct: 252 LKPAAAASLDAAHAEIQNLGLAAPAIQVNGYTDRIGKDAPNLALSQRRAESVANYMVSK- 310
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ I+ G+ P+ N GR ++R+E+Q+
Sbjct: 311 GVAPESITAVGYGKANPVTGNTCDAVKGRKALIACLAPDRRVELQV 356
>gi|254418948|ref|ZP_05032672.1| OmpA family protein [Brevundimonas sp. BAL3]
gi|196185125|gb|EDX80101.1| OmpA family protein [Brevundimonas sp. BAL3]
Length = 385
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V L + ++ AT +T + I +TD+ G+ NL +S R+ +
Sbjct: 280 VVYFDWDRSDLTAEARSVVTQAATYAKSGAATRVLIVGYTDTSGSAAYNLGLSNRRSRTV 339
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + + I++ G V N+R I I
Sbjct: 340 ADALVAQ-GVNGGVIALDGKGETALAKPTADGVREPLNRRATINI 383
>gi|309789304|ref|ZP_07683895.1| chemotaxis motB domain protein [Shigella dysenteriae 1617]
gi|308922839|gb|EFP68355.1| chemotaxis motB domain protein [Shigella dysenteriae 1617]
Length = 137
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 8/115 (6%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERA 134
+ +E +L+ IA +LN P+ I++ HTD +N +S +RA
Sbjct: 1 MFKTGSADVEPYMRDILRAIAPVLNGIPN-RISLSGHTDDFPYASGEKGYSNWELSADRA 59
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + L+ G+ S + + V G A + N+RI + + + +
Sbjct: 60 NASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQAEQ 112
>gi|307727324|ref|YP_003910537.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307587849|gb|ADN61246.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 230
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 56/171 (32%), Gaps = 13/171 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKKV-------FLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+ +F+ + S + K ++ ++
Sbjct: 40 TLMVLFLALYVLQLAKNSELQIKTLQHRAVKEAVGVQPPADAANAKEAAKEQLLSLLAPL 99
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ I ++ + I V F + L ++ +L IAT+L I ++ H
Sbjct: 100 QDNRQITIAHSPQGVEIAINAKVLFNSGDARLLQESYGVLNQIATVLRDRAKNNILVEGH 159
Query: 117 TDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
TDS+ ++N +S RA + + + ++ G A +P+
Sbjct: 160 TDSLPIATAKYESNWELSSARAGAVVRFFADK-GIQAHRMAAIGRADNFPL 209
>gi|21244837|ref|NP_644419.1| hypothetical protein XAC4120 [Xanthomonas axonopodis pv. citri str.
306]
gi|21110541|gb|AAM38955.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 451
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 51/143 (35%), Gaps = 9/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKF 106
+ + Q + + V D + F V +E + ++ IA + +
Sbjct: 309 RLKQLLSAQERAGLLRVDEQADGQTRVRLSSAAMFASGGVEVELQQRGLIAQIAAAIEQL 368
Query: 107 PSTVIAIQSHTDSIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P VI + HTD + ++N +S RA + L + + R + G P
Sbjct: 369 PGRVIVV-GHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGR-VEAIGAGASQP 426
Query: 163 ID-TNDTKVGRQNNQRIEIQIFP 184
I R N+R+EI P
Sbjct: 427 IAQPVQLPANRARNRRVEILFQP 449
>gi|315126001|ref|YP_004068004.1| chemotaxis LafU protein [Pseudoalteromonas sp. SM9913]
gi|315014515|gb|ADT67853.1| chemotaxis LafU protein [Pseudoalteromonas sp. SM9913]
Length = 331
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 20/187 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK----------AEDEFQMQLQDTGIVVS 66
G + K+ + +N S + ++ + +L ++V
Sbjct: 109 GMSEVLQVPDGTVEPKAGQGEKLNSAIDSQFEASSELSLLLESIDELSKEELLKNNLLVE 168
Query: 67 RIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD---S 119
+ + I + S+ + F L L L K + I I H+D
Sbjct: 169 EVPLGLRVIIRDDKHHQMFERSKSQMTP-FFEDLFLYLGGLVKDINNKIIISGHSDASLF 227
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
I N IS +RA + + G+ S++ + V F+ P++ + K N+R+E
Sbjct: 228 IDGSSRNWDISGDRAQQARKVMTMGGMPSSQVLQVNAFSSNRPLNKENQKA--SENRRVE 285
Query: 180 IQIFPRG 186
+ I +
Sbjct: 286 LLILTKD 292
>gi|227821156|ref|YP_002825126.1| OmpA/MotB domain protein [Sinorhizobium fredii NGR234]
gi|227340155|gb|ACP24373.1| OmpA/MotB domain protein [Sinorhizobium fredii NGR234]
Length = 309
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 64/189 (33%), Gaps = 30/189 (15%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+ V + L + E ++ + VS D + +
Sbjct: 101 NTPEKANKMEVYNSAVADARKNLLTSLKSEINSRIPGVNVAVSANYDALQF-AGDGLFDS 159
Query: 84 SEVFLEKKFLPMLQLIATILNKFPST---------------------VIAIQSHTDSIGT 122
+ ++ IA +L++ + ++ HTDS+G+
Sbjct: 160 GKEVPTTVGAVRMRQIAEVLDQNLGCYSLGSRRAFTENCNPAFALIDSLQVEGHTDSVGS 219
Query: 123 LKNNLLISQERADVIK--------SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
N+ +S +RA I ++ + +SV GF PI N+T+ GR
Sbjct: 220 EVLNMDLSAKRAASIYALMIEQKPDLVLYQNRDEQPVLSVAGFGKGRPIQQNETESGRDA 279
Query: 175 NQRIEIQIF 183
N+RI+++
Sbjct: 280 NRRIDLRFI 288
>gi|190890377|ref|YP_001976919.1| chemotaxis motility protein [Rhizobium etli CIAT 652]
gi|190695656|gb|ACE89741.1| chemotaxis motility protein [Rhizobium etli CIAT 652]
Length = 440
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 55/169 (32%), Gaps = 10/169 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI---- 76
A +K + + G+ V+ + I
Sbjct: 272 ADHQKDADKSADETERQKTEADELQQQIAQQIGGVAGKLAEGLTVTASEGGLLVSISDQN 331
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT---DSIGTLKNNLLISQER 133
+ + ++ + ++ I TIL + +AI+ HT G N +S +R
Sbjct: 332 DDSMFNIGSAVPRQEMVLAMERIGTILKERGGA-VAIRGHTDGRQYKGGQNENWRLSMDR 390
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
A L++ G+ R V GFA + D N+RIEI +
Sbjct: 391 AQSAYYMLVRGGLDEKRISQVSGFADRRLKLPADPF--NAANRRIEILV 437
>gi|167622471|ref|YP_001672765.1| OmpA domain-containing protein [Shewanella halifaxensis HAW-EB4]
gi|167352493|gb|ABZ75106.1| OmpA domain protein transmembrane region-containing protein
[Shewanella halifaxensis HAW-EB4]
Length = 346
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 40/110 (36%), Gaps = 3/110 (2%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L L + + VI + +D+ G + NL +S++R ++
Sbjct: 237 VLFSFDSSELTSAAKAKLDQVIQLSKSKDQDVILLNGQSDNQGDSQYNLKLSEKRVQHVE 296
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+YL+ + I + + + + R +R+ + + + +
Sbjct: 297 AYLVS-HGVEVKKIDTQAVGEQD--AHANLRKDRALERRVIVTLTSQEKV 343
>gi|163801699|ref|ZP_02195597.1| chemotaxis protein MotB-related protein [Vibrio sp. AND4]
gi|159174616|gb|EDP59418.1| chemotaxis protein MotB-related protein [Vibrio sp. AND4]
Length = 244
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 68/213 (31%), Gaps = 33/213 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L ++ ++ ++ L +K ++ ++ + + +L ++
Sbjct: 26 LMSALLVIFILAAVALIIELTQKTNDVEAGIEELKQAELAR--KNIIYDVRDELAKRNVI 83
Query: 65 VSRIGDMITCYIPVHV--SFVSEVFLEKKF--LPMLQLIATILNKFPSTV--------IA 112
V + IP + + L+ I +L+ +
Sbjct: 84 VEIADNDTVIRIPESTLTFASGKSSIPNDATIQQALKDIGVVLHSAIQKKDRFQYLDTVF 143
Query: 113 IQSHTDSIGTL---KNNLLISQERADVIKSYLIQR-----------GVSSNRFISVRGFA 158
I+ HTDS G K N +S +RA + + + SV G+A
Sbjct: 144 IEGHTDSDGIHYRGKGNWGLSTDRAISVWNVWQNELSLTPKLGDLENAYHAKLFSVSGYA 203
Query: 159 YKYPID-TNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + + N+RI+I+ +KK
Sbjct: 204 ATRRANLQESNQQEKSQNRRIDIRFT----VKK 232
>gi|325498706|gb|EGC96565.1| hypothetical protein ECD227_2803 [Escherichia fergusonii ECD227]
Length = 246
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 69/195 (35%), Gaps = 28/195 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + + + + ++ + + ++ E + + IV
Sbjct: 29 TAMMVLFLVVMVASLSSVTQRIQRAEQGEKTR---GQDISRLCERLE--LHARNVNKTIV 83
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV--------IAIQSH 116
V + I+ ++ FL + LQ + ++ + ++ I I+
Sbjct: 84 VDCHDNRISFG-EAGRFDHNQFFLNAEGQKALQDVVPLVLEASNSEEGKKWFKQIVIEGF 142
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP----------IDTN 166
TD+ G+ NL +S +R++ + L+ + IS + + N
Sbjct: 143 TDTDGSYLYNLHLSLQRSEWVMCSLLDSRSPLQKNISA----EQQLQIRKLFLAGGVSFN 198
Query: 167 DTKVGRQNNQRIEIQ 181
+ K ++ ++R+E++
Sbjct: 199 NAKESKEASRRVELR 213
>gi|325291956|ref|YP_004277820.1| flagellar motor protein MotB [Agrobacterium sp. H13-3]
gi|27763656|gb|AAO20254.1| MotB [Agrobacterium sp. H13-3]
gi|325059809|gb|ADY63500.1| flagellar motor protein MotB [Agrobacterium sp. H13-3]
Length = 428
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 14/173 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD------TGIVVSRIGDMITCY 75
+ E+ + + + +E + Q+ G+VV+ +
Sbjct: 253 AAEQAALTQPQPEQQQQGTAAQKEEAKELREEIEKQISGISGKLAEGLVVTPAEGGLLLT 312
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA--IQSHTDSIGTLKNNLLI 129
I + V + + ++ I +L + +V+ G +N +
Sbjct: 313 ISDQTETPMFNVGSAVPRGEMVLAMEKIGKLLQERGGSVVIRGHTDGRQFKGEANDNWRL 372
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S +RA L++ G+S R V GFA + D N+RIEI +
Sbjct: 373 SMDRAHSAYYMLVRGGLSEERVKQVSGFADRRLQVPADPLAN--ANRRIEILL 423
>gi|58038613|ref|YP_190577.1| chemotaxis MotB protein [Gluconobacter oxydans 621H]
gi|58001027|gb|AAW59921.1| Chemotaxis MotB protein [Gluconobacter oxydans 621H]
Length = 311
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 8/138 (5%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + V G + H + + + + +++ I L K
Sbjct: 173 PELADVRSQVSVTVGDDGLHVQIADSDHQPMFAMGQSSPNPHAVQLIKAIVPYLEKLHG- 231
Query: 110 VIAIQSHTDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
++I +TD+ +N +S RA ++ ++Q G R SV G+A + D
Sbjct: 232 KLSIAGYTDAAPYRPGQLSNWSLSSARAVAVRDLVVQSGFPDRRLKSVSGYADRNLFDP- 290
Query: 167 DTKVGRQNNQRIEIQIFP 184
T+ N+RI + + P
Sbjct: 291 -TQPLNPRNRRIVLVLSP 307
>gi|113477202|ref|YP_723263.1| OmpA/MotB [Trichodesmium erythraeum IMS101]
gi|110168250|gb|ABG52790.1| OmpA/MotB [Trichodesmium erythraeum IMS101]
Length = 302
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 22/167 (13%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + +T ++ D E +
Sbjct: 154 TTNTIESTAASQAKPETVSGQTDIVATSDSQEKYLTEAK----------------TLGQI 197
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++EV L + + +NK+ I ++ HT +G + N ISQ+RA+V+
Sbjct: 198 KFEINEVELSSPAKQTVNSLIPEINKYDPNRVTIKVEGHTSRVGDAQLNKEISQDRANVV 257
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+YL ++ + + G Y P+ N NQR I + P
Sbjct: 258 VAYLKEKNLPHQ--VISEGMGYSQPL-PNSNPASD-INQRTVIILIP 300
>gi|295087731|emb|CBK69254.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Bacteroides xylanisolvens XB1A]
Length = 377
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 60/158 (37%), Gaps = 8/158 (5%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ N+ D ++ ++E + + V + +
Sbjct: 223 NSSINALRSEVNNKDGQISNANQRINGLQEEL-EACRTKVVPVETVVKTARVPESIITFR 281
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ ++ LP ++ +A+ + K+P + + I+ + G+++ N I+ RA+ +K+ L+
Sbjct: 282 QGKSSVDASQLPNVERVASYMKKYPDSKVVIKGYASPEGSVEVNARIAAARAEAVKTILV 341
Query: 143 QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ S I+ G + T+ N R+ I
Sbjct: 342 NKYKISASRITAEGQG----VGDMFTEPDW--N-RVSI 372
>gi|265751275|ref|ZP_06087338.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263238171|gb|EEZ23621.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 397
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + +L +A +L +P + I +TD+ G+ + NL +S+ RA
Sbjct: 277 LENIHFEFDKDVITLVSHKILDRLAALLKNYPDSHFLITGYTDARGSAQYNLRLSERRAK 336
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKY----PIDTNDTKVGRQN 174
+ L++R + + RGF + P ++ + G +
Sbjct: 337 AVYKALLER-GVPSHMLKWRGFGNRAALVPPAAADNIREGDRK 378
>gi|161523343|ref|YP_001578355.1| flagellar motor protein MotB [Burkholderia multivorans ATCC 17616]
gi|189351884|ref|YP_001947512.1| flagellar motor protein MotB [Burkholderia multivorans ATCC 17616]
gi|160340772|gb|ABX13858.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
gi|189335906|dbj|BAG44976.1| chemotaxis MotB protein [Burkholderia multivorans ATCC 17616]
Length = 338
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDHVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI + + R +
Sbjct: 267 NL--NKADPLDPENRRISVIVLNRKS 290
>gi|254250906|ref|ZP_04944224.1| Flagellar motor protein [Burkholderia dolosa AUO158]
gi|124893515|gb|EAY67395.1| Flagellar motor protein [Burkholderia dolosa AUO158]
Length = 339
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDHVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI + + R +
Sbjct: 267 NL--NKADPLDPENRRISVIVLNRKS 290
>gi|291278841|ref|YP_003495676.1| hypothetical protein DEFDS_0426 [Deferribacter desulfuricans SSM1]
gi|290753543|dbj|BAI79920.1| hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 200
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 73/196 (37%), Gaps = 18/196 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+I+ LS+ I+ I+G + ++ L I + L + + L
Sbjct: 5 IIRSFYLSLLIIIFITGISGGANKRLFKALV-QKPGSISTVIYVYDLSVDSAKENIALNG 63
Query: 61 TGI-VVSRIGDMITCYIPVHVSFVSEVFL-------EKKFLPMLQL--IATILNKFPSTV 110
+ + + + ++S + L + ++ L I+ N V
Sbjct: 64 WKVLQIEEVSNGKDYKSIKNISGFGNLKLIKTFYFKKGEYRFNLDNETISFFRNLNRDKV 123
Query: 111 IAIQSHTDSIG-----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
I HTDS+ +NN +S RA+ IK + + + + GF +P+ +
Sbjct: 124 YYIYGHTDSLPVKPNNKYRNNYELSILRAEFIKELIRKYSGIDSNA-KIVGFGAFFPLVS 182
Query: 166 NDTKVGRQNNQRIEIQ 181
N G + N+R+E+
Sbjct: 183 NG-LQGAEKNRRVELY 197
>gi|261251271|ref|ZP_05943845.1| hypothetical protein VIA_001290 [Vibrio orientalis CIP 102891]
gi|260938144|gb|EEX94132.1| hypothetical protein VIA_001290 [Vibrio orientalis CIP 102891]
Length = 188
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 65/197 (32%), Gaps = 26/197 (13%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + ++ +++ + + + + V + L + E + + L +
Sbjct: 1 MKYPVIITSLLLSPLGYANCLGSVDEYITSTTLVSSHTVKTQVSGHLTQREAKSENTLLN 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSE-------------VFLEKKFLPMLQLIATILNKFP 107
+G V + V F + L +L+ ++
Sbjct: 61 SGRDV------VHSEAADDVCFYDKETQSLVLNYGIDIYKLSPNHKQVLEQYLGLV--NN 112
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-- 165
+ I I+ H DS+G N +S RA + YL NR + + PI
Sbjct: 113 TAKIYIEGHADSLGGEGYNKALSARRAKQVAKYLKSDLKQGNRIVE-HAYGESSPICNLE 171
Query: 166 NDTKVGRQNNQRIEIQI 182
++ G N+R+ I I
Sbjct: 172 QNSATG--CNRRVVITI 186
>gi|218658934|ref|ZP_03514864.1| flagellar motor protein MotB [Rhizobium etli IE4771]
Length = 151
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 11/148 (7%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ ++ G K + + + G++VS + + ++ + ++
Sbjct: 9 QIAQQIGGVAGKLAEGLTVTAAEGGLLVSISDQN-----DDSMFNIGSAVPRQEMVLAME 63
Query: 98 LIATILNKFPSTVIAIQSHT---DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
I TIL + +AI+ HT G N +S +RA L++ G+ R V
Sbjct: 64 RIGTILKERGGA-VAIRGHTDGRQYKGAQNENWRLSMDRAQSAYYMLVRGGLDEKRISQV 122
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
GFA + + N+RIEI +
Sbjct: 123 SGFADRRLKLP--AEPFNAANRRIEILV 148
>gi|84684610|ref|ZP_01012511.1| OmpA domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84667589|gb|EAQ14058.1| OmpA domain protein [Rhodobacterales bacterium HTCC2654]
Length = 514
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 47/158 (29%), Gaps = 13/158 (8%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--------SFVSEVFLE 89
+ + + G V + + L+
Sbjct: 356 VDQEIEEIPFSVQGTRLANAIAQAGPEVGLSELQRMVALMDGMRRLTLTYRFKGGSTALD 415
Query: 90 KKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR--- 144
+ L+A L F + +D G NL ++ RAD ++ ++
Sbjct: 416 APSRSNVALLADALEAGAFDGRRLTFVGFSDGQGAAALNLRLAARRADAVRRAVLDAAET 475
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I F P+ +DT GR+ N+R+E+ +
Sbjct: 476 FDPERVVIEAEAFGEALPMACDDTDWGRRINRRVEVWV 513
>gi|108813332|ref|YP_649099.1| PAL/OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|108776980|gb|ABG19499.1| PAL/OmpA-family membrane protein [Yersinia pestis Nepal516]
Length = 553
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ V + L ML + P +I + HTD G + N ++S +RA+ ++
Sbjct: 446 SLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALR 505
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-NQR 177
+++ S +V+G+ PI GRQ ++R
Sbjct: 506 DWMLSTSDVSPTCFAVQGYGATRPI-------GRQRYSRR 538
>gi|332519438|ref|ZP_08395905.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045286|gb|EGI81479.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 289
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 20/151 (13%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ + D +++ ++ I + GD I + S ++ L+ +A
Sbjct: 145 EAIVAKEDDDKEKTTEDIKSGSI---KKGDKI--RLDKIYFKTSYSYVTSDSKKTLEKLA 199
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKN-------NLLISQERADVIKSYLIQRGVSSNRFIS 153
IL + + IQ H ++ +S RA I YL ++ R +
Sbjct: 200 KILVEKDNLYFTIQGHVCCTQNSRDAVDKKTKKRNLSVSRAKYIYDYLARK-GVDKRRMK 258
Query: 154 VRGFAYKYPIDTNDTKVGRQN-NQRIEIQIF 183
G K+P+ G ++R+EI +
Sbjct: 259 YVGMRRKFPLG------GDPKYDRRVEILVT 283
Score = 42.7 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 2/107 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
E + L L + L+ ++I TD GT + NL +SQ RA+ I
Sbjct: 24 DVYFDTDEYNVPLTEENRLLLFISSLDSININKVSIYGFTDDRGTNEYNLELSQNRANTI 83
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG--RQNNQRIEIQI 182
K GV N +V G N+ +V R N+++EI +
Sbjct: 84 KELFSGYGVDPNLITNVNGKGEILLKVLNEEEVHQIRGLNRKVEIIV 130
>gi|330997213|ref|ZP_08321066.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
gi|329571008|gb|EGG52715.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
Length = 394
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 42/117 (35%), Gaps = 3/117 (2%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
E Q V++ + V ++ ++ P ++ IAT
Sbjct: 260 NEEQKSADLERALQECRNQGPKVITNNKKTLE---SVVTFRQGKIVIDASQQPNVERIAT 316
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
L + I + G+ + N I+ +RA+ +K+ L+ + R I+ +G
Sbjct: 317 YLKNHKEAKVNILGYASPEGSAEVNERIANQRAEAVKNMLVNKYRIDVRRITAKGQG 373
>gi|238796916|ref|ZP_04640420.1| Flagellar motor protein [Yersinia mollaretii ATCC 43969]
gi|238719176|gb|EEQ10988.1| Flagellar motor protein [Yersinia mollaretii ATCC 43969]
Length = 320
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 60 DTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + +S D + I + V LE +LQ + +LN P+ I +
Sbjct: 102 QSNLRLSLTDDGLLIQIIDSQERPMFKVGSRELEPYMRIILQALVPVLNDLPN-KINLTG 160
Query: 116 HTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
HTDS+ + +N +S +RA+ + L+ G++ N+F+ V G A + +
Sbjct: 161 HTDSLPYVNGEAGYSNWELSSDRANASRRTLVSGGLADNKFLRVIGSADMMNLANVKSDA 220
Query: 171 GRQNNQRIEIQIFPRGNIK 189
N+RI I + + K
Sbjct: 221 --PINRRISILVLSKNKEK 237
>gi|157156048|ref|YP_001461438.1| hypothetical protein EcE24377A_0284 [Escherichia coli E24377A]
gi|157078078|gb|ABV17786.1| hypothetical protein EcE24377A_0284 [Escherichia coli E24377A]
Length = 246
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 69/195 (35%), Gaps = 28/195 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + + + + ++ + + ++ E + + IV
Sbjct: 29 TAMMVLFLVVMVASLSSVTQRIQRAEQGEKTR---GQDISRLCERLE--LHARNVNKTIV 83
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV--------IAIQSH 116
V + I+ ++ FL + LQ + ++ + ++ I I+
Sbjct: 84 VDCHDNRISFG-EAGRFDHNQFFLNAEGQKALQDVVPLVLEASNSEEGKKWFKQIVIEGF 142
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP----------IDTN 166
TD+ G+ NL +S +R++ + L+ + IS + + N
Sbjct: 143 TDTDGSYLYNLHLSLQRSEWVMCSLLDSRSPLQKNISA----EQQLQIRKLFLAGGVSFN 198
Query: 167 DTKVGRQNNQRIEIQ 181
+ K ++ ++R+E++
Sbjct: 199 NAKESKEASRRVELR 213
>gi|307246344|ref|ZP_07528422.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307255330|ref|ZP_07537142.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307259780|ref|ZP_07541500.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306852754|gb|EFM84981.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306861717|gb|EFM93699.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306866170|gb|EFM98038.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 369
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + I + +TD IG +NL +SQ RA
Sbjct: 246 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQRRA 305
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ + +YL+ + + ++ G+ P+ T D GR ++R+E+Q+
Sbjct: 306 ETVANYLVSK-GQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 361
>gi|121611336|ref|YP_999143.1| OmpA/MotB domain-containing protein [Verminephrobacter eiseniae
EF01-2]
gi|121555976|gb|ABM60125.1| OmpA/MotB domain protein [Verminephrobacter eiseniae EF01-2]
Length = 327
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 49/144 (34%), Gaps = 14/144 (9%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPS 108
I ++ G I + + + +L I L +
Sbjct: 145 NPRLNEYRSQIRIRITPDGLQIQIIDEQNRPMFDSGSARVLPHMRDILHAIGAALGGVKN 204
Query: 109 TVIAIQSHTDSIGTLKN---------NLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
I++ HTD++ K N +S +RA+ + L+ G+ ++ V G A
Sbjct: 205 -RISLAGHTDAVPYGKYGPHDEPGYSNWELSADRANASRRELVSAGMPDDQLGRVVGLAA 263
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF 183
P+ +D N+RI I +
Sbjct: 264 SDPLAPDDPLA--PANRRISITVL 285
>gi|41349559|emb|CAF21861.1| major outer membrane protein [Pseudomonas putida]
Length = 287
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 4/91 (4%)
Query: 61 TGIVVSRIGD----MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ V G + + ++ ++ +A + ++PST ++ H
Sbjct: 196 ANVTVDADGCPAVTEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGH 255
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
TDS+G N +S+ RA+ +K L +
Sbjct: 256 TDSVGPDAYNQKLSERRANAVKQVLTNQYGV 286
>gi|82940569|emb|CAJ44300.1| putative Chemotaxis Motility protein B (MotB) [Rhizobium
leguminosarum bv. viciae]
Length = 146
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 57/149 (38%), Gaps = 11/149 (7%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ ++ G K + + + G++VS + + ++ + +
Sbjct: 1 AQIAQQIGGVAGKLAEGLTVTASEGGLLVSISDQT-----DDSMFNIGSAVPRQEMVLAM 55
Query: 97 QLIATILNKFPSTVIAIQSHT---DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+ I IL IAI+ HT GT N +S +RA L++ G+ R
Sbjct: 56 EKIGAILKARGGA-IAIRGHTDGRQYKGTQNENWRLSMDRAQSAYYMLVRGGLDEKRISQ 114
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
V GFA + +D N+RIEI +
Sbjct: 115 VSGFADRRLKLPSDPF--NATNRRIEILV 141
>gi|296131330|ref|YP_003638580.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
gi|296023145|gb|ADG76381.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
Length = 412
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 59/169 (34%), Gaps = 19/169 (11%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ + + GS + Q + V + +P + F
Sbjct: 243 GARGAPVTVDTRTGSTTTRDVGSLPEDVVAPPQATV------VETSTRSVCVLLPSVLLF 296
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
E P L+ + + P+ V+ ++ HT GT + +SQ+RAD + + L
Sbjct: 297 GPEETELSSTEP-LRGVVARATEEPAWVVRVEGHTADFGTPEGRARVSQDRADAVAAALR 355
Query: 143 QRGVSSNRFISVRGFAYKYPIDTN---------DTKVGRQNNQRIEIQI 182
+GV++ + G P DT N+R+EI++
Sbjct: 356 SQGVTNE--VVAVGRGADRPRADEWPAGPRGPHDTAAAD-VNRRVEIRL 401
>gi|194364216|ref|YP_002026826.1| flagellar motor protein MotB [Stenotrophomonas maltophilia R551-3]
gi|194347020|gb|ACF50143.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
Length = 318
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 62/180 (34%), Gaps = 16/180 (8%)
Query: 17 GCGLASREKKKVFLHKSNDTDI-VNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDM 71
G + +K + + D ++ + + + ++ +++ +
Sbjct: 101 GSSNDPFQNQKEAVPQPVDQQQRDKQQLEALMKELQEAISRSQALEPFKDQLLLDLTPEG 160
Query: 72 ITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN-- 125
+ I + + L+ +L +A LN P+ I++ HTD
Sbjct: 161 LRIQIVDKQNRPMFDLGSATLKPYTQQILHELAEYLNHVPN-RISLTGHTDITAYSAARG 219
Query: 126 --NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
N +S +RA+ + LI G+ ++ V G + + N+RI I +
Sbjct: 220 YGNWELSADRANAARRALIDGGLEDSKITRVVGLSSSV-LFDKADPQN-PINRRISIVVM 277
>gi|46397593|gb|AAS91729.1| OmpA [Bibersteinia trehalosi]
Length = 364
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 44/117 (37%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + + I + +TD IG NL +SQ RA
Sbjct: 241 SDVLFDFGKANLKPAAAASLDAAHAEIQNLGLAAPAIQVNGYTDRIGKDAPNLALSQRRA 300
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ + +Y++ + + I+ G+ P+ N ++R+E+Q+
Sbjct: 301 ESVANYMVSK-GVAPESITAVGYGKANPVTGNTCDAVKGRKALIACLAPDRRVELQV 356
>gi|189461675|ref|ZP_03010460.1| hypothetical protein BACCOP_02339 [Bacteroides coprocola DSM 17136]
gi|189431647|gb|EDV00632.1| hypothetical protein BACCOP_02339 [Bacteroides coprocola DSM 17136]
Length = 364
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 41/111 (36%), Gaps = 9/111 (8%)
Query: 74 CYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD-SIGTLKNNLLISQ 131
+ +V F + + ++ +A + + I + D G N+ +S+
Sbjct: 259 VTMTENVFFALNSSAIRSGEKQKIEKLAEFMKNHAECKVTICGYADKQTGNADINMRLSK 318
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+RA+ + + ++ ++ I+V + T N R+ I I
Sbjct: 319 KRAENVATQ-LKEMGIDSQRITVDYKGDT--VQPFSTPE---EN-RVSICI 362
>gi|256019218|ref|ZP_05433083.1| outer membrane protein A [Shigella sp. D9]
Length = 109
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 89 EKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
++ L L +A LN F I + HTD +G+ NL +S++RA+ ++ YLI +
Sbjct: 2 SQQGLADLDHLAMNLNSFEKINGIIVIGHTDRLGSEDYNLTLSRKRAETVRQYLIAK-GL 60
Query: 148 SNRFISVRGFAYKYPI----DTNDTKV---GRQNNQRIEIQI 182
I+ G P+ ND Q N+R+E+++
Sbjct: 61 PAEKITSIGMGKSQPVKKCKYNNDRASLIVCLQPNRRVEVEV 102
>gi|114570105|ref|YP_756785.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
gi|114340567|gb|ABI65847.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
Length = 307
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 72/186 (38%), Gaps = 19/186 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGD 70
G + + S + +R + L A + +Q+ +++ +
Sbjct: 118 GSPEAVESVTEITASAMAEAQQRRDAAELHSASMSLRQAMQEMPELAELSNHVLIDETPE 177
Query: 71 MITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS----IGT 122
+ + + ++ + +L+ +A I + P+ +++ HTDS G
Sbjct: 178 GLRIQLIDQEGRPMFDPGATRPNERAVTLLRAVARIAERLPN-RLSVAGHTDSAPAAPGA 236
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
N +S +RA+ +S L + G+S +R VRG A P+ +D N+RI + +
Sbjct: 237 DYTNWELSADRANAARSVLQRAGISDDRIYEVRGKAGSEPLYPDDPY--MPGNRRISVVL 294
Query: 183 FPRGNI 188
+
Sbjct: 295 LREAPV 300
>gi|315122280|ref|YP_004062769.1| flagellar motor protein MotB [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495682|gb|ADR52281.1| flagellar motor protein MotB [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 158
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 17/150 (11%)
Query: 47 LDKAEDEFQMQLQD-------TGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPM 95
+ E + L GI+ + + I H + S + + +
Sbjct: 7 MQDLEQKISTTLSGLVANHIVKGILFKTTPNGMLISIIDHNNTPMFDKSSSIPLPEMILI 66
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNRFI 152
LQ I L++ I+I+ HTD+ +N +S +RA L++ G+S R
Sbjct: 67 LQKIGEALSQSNE-NISIEGHTDASPFRHSTGDNWKLSLDRAYSTYQILMKSGISEKRIS 125
Query: 153 SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G A P ++D N+RIEI +
Sbjct: 126 KISGLAQHNPKISSDPM--NAANRRIEILV 153
>gi|291613013|ref|YP_003523170.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
gi|291583125|gb|ADE10783.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
Length = 341
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 25/150 (16%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
L K +++ + L G+ V + + + LE +L I +LN
Sbjct: 147 LKKYKNQILLDLTTEGLRVQIVDEK-----NRPMFQSGSSELEPYTKDILHEIGQMLNTM 201
Query: 107 PSTVIAIQSHTDSIGT-----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRG----- 156
P+ I++ HTD+ +N +S +RA+ + LI G++ ++ + V G
Sbjct: 202 PN-KISLSGHTDAQPYVTADRHYSNWELSADRANASRRELINGGLAEDKIVRVVGLSSAV 260
Query: 157 -FAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
F P++ N+RI I + +
Sbjct: 261 LFDKAQPLNP--------INRRISIIVMNK 282
>gi|307250689|ref|ZP_07532626.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306857297|gb|EFM89416.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
Length = 368
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + I + +TD IG +NL +SQ RA
Sbjct: 245 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQRRA 304
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ + +YL+ + + ++ G+ P+ T D GR ++R+E+Q+
Sbjct: 305 ETVANYLVSK-GQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 360
>gi|220924426|ref|YP_002499728.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219949033|gb|ACL59425.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
Length = 277
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 50/155 (32%), Gaps = 15/155 (9%)
Query: 41 KRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKF 92
FG ++ Q +++ + + + +
Sbjct: 113 DGFGLAMASLRQALQDLPDIAELSKNVLIHETERGLDVSLVDQDNRSMFPDGSTRPNDRT 172
Query: 93 LPMLQLIATILNKFPSTVIAIQSHT----DSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+L+ +A + + IA+ +T +S RA ++ L G+
Sbjct: 173 RQVLERLAPTIRSLSN-RIAVAGYTAATRPGRRPPAPPWELSTGRAISVREILAGAGIPD 231
Query: 149 NRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RF V G A P+ ++ + N+R+ I +
Sbjct: 232 DRFAVVSGKADTEPLFPDNPYI--AANRRVTITLL 264
>gi|303250857|ref|ZP_07337050.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307253079|ref|ZP_07534962.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|302650272|gb|EFL80435.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859448|gb|EFM91478.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 371
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + I + +TD IG +NL +SQ RA
Sbjct: 248 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQRRA 307
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ + +YL+ + + ++ G+ P+ T D GR ++R+E+Q+
Sbjct: 308 ETVANYLVSK-GQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 363
>gi|260575173|ref|ZP_05843173.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259022433|gb|EEW25729.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 438
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 45/116 (38%), Gaps = 6/116 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQL----IATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
T + ++ L +A ++ PS + ++ HTD++G+ +NL
Sbjct: 316 TIDVDNITFDTGSAAIKATEAAKLARLGRLVANLIAANPSEMFLVEGHTDAVGSGSSNLA 375
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+S RA+ + L + + V+G+ DT N+R +++
Sbjct: 376 LSDRRAESLALALTEYYGVPPENLVVQGYGETELRI--DTLANEPANRRAAVRLIS 429
>gi|167648617|ref|YP_001686280.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
gi|167351047|gb|ABZ73782.1| OmpA/MotB domain protein [Caulobacter sp. K31]
Length = 401
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 1/104 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L + ++ A +T + + HTD+ G+ K N +S+ RA +
Sbjct: 297 VYFPFDQYVLTPEAQSVVSEAANYATSGHATKLVVVGHTDTSGSPKYNAKLSERRAKAVA 356
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + ++V P V N+R I I
Sbjct: 357 DALVGA-GVAADALAVDWKGESAPAVATGDGVKEPLNRRSTISI 399
>gi|165976856|ref|YP_001652449.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|303253773|ref|ZP_07339908.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248471|ref|ZP_07530491.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307257499|ref|ZP_07539265.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|165876957|gb|ABY70005.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|302647357|gb|EFL77578.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855039|gb|EFM87222.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306864011|gb|EFM95928.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 368
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + I + +TD IG +NL +SQ RA
Sbjct: 245 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQRRA 304
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ + +YL+ + + ++ G+ P+ T D GR ++R+E+Q+
Sbjct: 305 ETVANYLVSK-GQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 360
>gi|86146740|ref|ZP_01065060.1| hypothetical protein MED222_15379 [Vibrio sp. MED222]
gi|85835390|gb|EAQ53528.1| hypothetical protein MED222_15379 [Vibrio sp. MED222]
Length = 236
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 68/205 (33%), Gaps = 25/205 (12%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ +F++ +++ EK+ + ++ + + E EF + +
Sbjct: 28 LMVIFLLISVALMNRIDVEKRVIKAMDITISEAQVRIHQA----LEKEFTQDFDKWQVEL 83
Query: 66 SRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQ----LIATILNKFPS--TVIAIQSHTD 118
+ I Y + SE L L L+ +L ++ I I+ HT
Sbjct: 84 AADKSLSIDFYAKPYHFVSSESELSPALLSTLKVFFPRYINVLEQYQDDIQAIQIEGHTS 143
Query: 119 SIGT-------LKNNLLISQERADVIKSYLIQRGVSSNRF-------ISVRGFAYKYPID 164
S K N+++SQ RA + ++ + ++ G+
Sbjct: 144 SYWEGLNSFEAYKQNMMLSQNRASAVFEKVVNFDGILEQHGSWVMKKLAALGYGPAQLRF 203
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNIK 189
K ++R+ ++ + IK
Sbjct: 204 HATGKEDSSRSRRVSFKVITKSEIK 228
>gi|163755163|ref|ZP_02162283.1| peptidoglycan-associated cytoplasmic membrane protein [Kordia
algicida OT-1]
gi|161324583|gb|EDP95912.1| peptidoglycan-associated cytoplasmic membrane protein [Kordia
algicida OT-1]
Length = 139
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEV--FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
G V S+ + + F + L+K+ +L +A I+ + ++SH+
Sbjct: 17 GKVFSQDHSQKIQELSAQLKFKNSASLELKKESFKILDTLAVIIK-NSNASYMVKSHSTL 75
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
G ++NL+ +Q+RA++IK LI RGV S R I +GF I T++G N RIE
Sbjct: 76 RGKQEDNLVKTQKRAEIIKEELINRGVDSTRLI-AKGFGETDRIYHTPTRIGDMKNDRIE 134
Query: 180 IQ 181
I
Sbjct: 135 IV 136
>gi|78358627|ref|YP_390076.1| OmpA family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78221032|gb|ABB40381.1| OmpA family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 306
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 53/196 (27%), Gaps = 17/196 (8%)
Query: 6 GLSMFIMTTISGCGLASREK-KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + +T G G S + ++ + + + L +D
Sbjct: 47 LVVLASVTGAFGIGSGSFNPHAEDGANRIVEPGPMQMGSVNDLQPLKDLIWEDPDSDLNF 106
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
I + L + +L I L + + + HT + +
Sbjct: 107 QQNSMVQILSINDAVLFRPGSFVLLPGGIKVLDRILPWLLRV-EHPLLLAGHTATQRAEE 165
Query: 125 --------------NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+S R + + + V FA+ P T
Sbjct: 166 GQEYKVVFDEKQLAPTWRLSFMRVMAVYR-YLTGRGMPAENLKVEAFAHYRPRFDGTTPD 224
Query: 171 GRQNNQRIEIQIFPRG 186
GR+ N R++I + R
Sbjct: 225 GRRRNSRVDIVLDKRN 240
>gi|115526365|ref|YP_783276.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115520312|gb|ABJ08296.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 270
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 61/171 (35%), Gaps = 12/171 (7%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+ + ++ F S + + ++ + + + I +
Sbjct: 97 AAIATKQMKAEREFATASASLRRALQDIPELTEVTKNIIFQETSQSLAL------EIVDH 150
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT---LKNNLLISQE 132
+ +++ +A L + I+I HT S T ++ +S
Sbjct: 151 FSRPMFRQGSAVPYDWTRVLIEKLAVPLKAT-ALRISIVGHTSSTETARGDRDVFELSVL 209
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RAD ++ L Q+G+ +++ V G + P+ ++D N+R+ I +
Sbjct: 210 RADAVRRILKQQGLPTSQLFVVAGKGDREPLFSDDP--TMAANRRVTIALM 258
>gi|317047826|ref|YP_004115474.1| OmpA/MotB domain-containing protein [Pantoea sp. At-9b]
gi|316949443|gb|ADU68918.1| OmpA/MotB domain protein [Pantoea sp. At-9b]
Length = 342
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 14/122 (11%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
I + +E +L+ IA +LN P+ I++ HTD +
Sbjct: 151 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNDIPN-KISLAGHTDDFQYATGDRGYS 209
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT---NDTKVGRQNNQRIEIQI 182
N +S +RA+ + L+ G+ ++ + V G A + ND N+RI + +
Sbjct: 210 NWELSADRANASRRELMMGGLDGSKMLRVVGMADTMKLKNRGGND-----AVNRRISLLV 264
Query: 183 FP 184
Sbjct: 265 LN 266
>gi|294787779|ref|ZP_06753023.1| putative OmpA family protein [Simonsiella muelleri ATCC 29453]
gi|294484072|gb|EFG31755.1| putative OmpA family protein [Simonsiella muelleri ATCC 29453]
Length = 214
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 57/153 (37%), Gaps = 23/153 (15%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
+ D+ + Q L+ +G+ + I +F + L+ + +L + +
Sbjct: 47 NAQRDEIVQDVQQALKKSGLEIETDPRTGDMNIAADFAFESGKAVLKPEGKAILDQLMPV 106
Query: 103 L-----------NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR- 150
+ T + ++ HTDS+G+ +N+ +S ERA+ + SY+ +
Sbjct: 107 FAKAVFDELSGEQQEEITRLIVEGHTDSVGSYASNMQLSTERANAVLSYIDTQMPDFPHK 166
Query: 151 -----FISVRGFAYKYPIDTNDTKVGRQNNQRI 178
++ G + + ++R+
Sbjct: 167 AELLAKMTAVGRGE-----NDASPTENPADRRV 194
>gi|322515689|ref|ZP_08068662.1| OmpA protein [Actinobacillus ureae ATCC 25976]
gi|322118234|gb|EFX90526.1| OmpA protein [Actinobacillus ureae ATCC 25976]
Length = 383
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 15/143 (10%)
Query: 54 FQMQLQDTGIVVSRIGDMITCYI---PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PS 108
+ V +++T + + L L T + +
Sbjct: 234 LSYRFGQGAAPVEAAPEVVTKNFAFSSDVLFDFGKSSLNPAAATALDAANTEIANLGLAT 293
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTN 166
I + +TD IG +NL +SQ RA+ + +YL+ + + ++ G+ P+ T
Sbjct: 294 LAIQVNGYTDRIGKEASNLKLSQRRAETVANYLVSK-GQNAANVTAVGYGEANPVTGATC 352
Query: 167 DTKVGR-------QNNQRIEIQI 182
D GR ++R+E+Q+
Sbjct: 353 DAVKGRKALIACLAPDRRVEVQV 375
>gi|167616252|ref|ZP_02384887.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
thailandensis Bt4]
gi|257142822|ref|ZP_05591084.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia
thailandensis E264]
Length = 267
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 16/135 (11%)
Query: 62 GIVVSRIGDMITCYIPVHVSFV-SEVFLE---KKFLPMLQLIATIL-NKFPSTV-IAIQS 115
+ + D+ + + F + L L IA L ++ + +
Sbjct: 130 AVQTAPRDDVKQFTLDYQLLFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTG 189
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR--- 172
+TD +GT N +S RA+ I + I +G P+ +N G
Sbjct: 190 YTDRLGTNTYNRQLSLARAEAI-REYLTTRGLPGNLIVAQGLGKADPV-SNGCPDGHSAE 247
Query: 173 -----QNNQRIEIQI 182
++R+ I +
Sbjct: 248 AIACLAPDRRVRIDV 262
>gi|294508723|ref|YP_003572782.1| chemotaxis MotB protein [Salinibacter ruber M8]
gi|294345052|emb|CBH25830.1| chemotaxis MotB protein [Salinibacter ruber M8]
Length = 227
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 9/116 (7%)
Query: 63 IVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSI 120
+ + R G +P + L L+ L +P+ + ++ H D
Sbjct: 84 VQMRRQGGRAVRVLPADSLFEAGTATLTAAGKKRLRATIAHLETAYPTRAVRVEGHADDT 143
Query: 121 G-------TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+N +S RA + YL R + + + P+ +N T
Sbjct: 144 PLSEALQERFASNWELSAARATAVVRYLSARSALAPSQFAALAYGATDPVASNATA 199
>gi|90025228|gb|ABD85117.1| OmpA [Actinobacillus suis H91-0380]
Length = 373
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + I + +TD IG +NL +SQ RA
Sbjct: 250 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQRRA 309
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ + +YL+ + + ++ G+ P+ T D GR ++R+E+Q+
Sbjct: 310 ETVANYLVSK-GQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 365
>gi|325981670|ref|YP_004294072.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
gi|325531189|gb|ADZ25910.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
Length = 312
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q + ++ G I + + + L+ +L+ I +LN+
Sbjct: 138 QANPQLQRFANQLLLDITTDGLRIQIVDEQNRPMFALGRAELQPYTRTILREIGKMLNEV 197
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ I++ HTD+ +N +S +RA+ + LI G+ +N+ + V G +
Sbjct: 198 TN-KISLSGHTDAKPFPSGDKGYSNWELSADRANASRRELIVGGMDANKMLQVVGLSSAV 256
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ D + N+RI I + K
Sbjct: 257 -LFDKDDPLN-PINRRISIVVMNEKAEK 282
>gi|126208885|ref|YP_001054110.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae L20]
gi|126097677|gb|ABN74505.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 368
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + I + +TD IG +NL +SQ RA
Sbjct: 245 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQRRA 304
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ + +YL+ + + ++ G+ P+ T D GR ++R+E+Q+
Sbjct: 305 ETVANYLVSK-GQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 360
>gi|213950522|gb|ACJ54534.1| outer membrane protein A [Haemophilus parasuis]
Length = 305
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 219 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 278
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ + +Y++ + + ++ G+ P
Sbjct: 279 ETVANYIVSK-GVNPANVTAVGYGEANP 305
>gi|84502387|ref|ZP_01000523.1| chemotaxis MotB protein [Oceanicola batsensis HTCC2597]
gi|84389199|gb|EAQ01996.1| chemotaxis MotB protein [Oceanicola batsensis HTCC2597]
Length = 339
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 64/158 (40%), Gaps = 19/158 (12%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQ--------DTGIVVSRIGDMITCYIPVH----VSFVS 84
K +++++ E+E + +Q + R + + I +
Sbjct: 166 QAEVKEREANMERLEEEIRRHIQERVDLEDLGENLRFDRTSEGLLVQIMDKEGRSMFARG 225
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSY 140
++ + ++++I + + I I HTD++ + N N +S +RA+ +
Sbjct: 226 SARVDSRTRDLIRIIGESIVDMQNA-IVITGHTDAVPFVNNLGYSNWELSADRANATRRV 284
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
LI GVS R + G A P++ +D + N+RI
Sbjct: 285 LIDTGVSPARIKRISGLASTDPLNADDPEA--AENRRI 320
>gi|224371628|ref|YP_002605792.1| putative outer membrane protein [Desulfobacterium autotrophicum
HRM2]
gi|223694345|gb|ACN17628.1| putative outer membrane protein [Desulfobacterium autotrophicum
HRM2]
Length = 350
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 7/139 (5%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKF 106
E+ + V+ G + + F + L L +A L +
Sbjct: 210 KALEESLIQAGLENHFEVAVEGPGLVLESVFPILFDPCKFALTDAHKRFLGRLAGFLKPY 269
Query: 107 PSTVIAIQSHTDSI---GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
S ++ + TD GT N+ +S +RA + L +R + + G
Sbjct: 270 -SVLVEVTGFTDYRKIRGTKMTNIELSAKRAGAVVRELRER-GMKSSVFKITGMGEYK-K 326
Query: 164 DTNDTKVGRQNNQRIEIQI 182
++ R ++R +I I
Sbjct: 327 CLEKSERCRVLSRRADITI 345
>gi|330826741|ref|YP_004390044.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
K601]
gi|329312113|gb|AEB86528.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
Length = 311
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 58/171 (33%), Gaps = 11/171 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + + + + + + + I V+ G I +
Sbjct: 110 SIDTVRAERARLDAQRIKALQSKIDAMITE-NPRLNEYRSQIRIDVTPDGLQIQIVDDQN 168
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQE 132
+ ++ +L+ I L + I++ HTD+ +N +S +
Sbjct: 169 RPMFDSGSALVKPYMRDILREIGAALGSVEN-RISLAGHTDAAPYGNGDRGYSNWELSAD 227
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ + L+ G+ R V G A ++ ++ + N+RI I +
Sbjct: 228 RANASRRELVAAGMPDARLGRVVGLAASDLLEPDNPRA--PVNRRITITVL 276
>gi|319764525|ref|YP_004128462.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
gi|317119086|gb|ADV01575.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
Length = 312
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 58/171 (33%), Gaps = 11/171 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + + + + + + + I V+ G I +
Sbjct: 110 SIDTVRAERARLDAQRIKALQSKIDAMITE-NPRLNEYRSQIRIDVTPDGLQIQIVDDQN 168
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQE 132
+ ++ +L+ I L + I++ HTD+ +N +S +
Sbjct: 169 RPMFDSGSALVKPYMRDILREIGAALGSVEN-RISLAGHTDAAPYGNGDRGYSNWELSAD 227
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA+ + L+ G+ R V G A ++ ++ + N+RI I +
Sbjct: 228 RANASRRELVAAGMPDARLGRVVGLAASDLLEPDNPRA--PVNRRITITVL 276
>gi|312142930|ref|YP_003994376.1| OmpA/MotB domain protein [Halanaerobium sp. 'sapolanicus']
gi|311903581|gb|ADQ14022.1| OmpA/MotB domain protein [Halanaerobium sp. 'sapolanicus']
Length = 46
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+L+ + G P TN+T+ GRQ N+R+E+
Sbjct: 1 MEFLVNNHNIDENRLQPYGVGPLAPQATNETEEGRQQNRRVELV 44
>gi|190150781|ref|YP_001969306.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307264101|ref|ZP_07545698.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|189915912|gb|ACE62164.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306870579|gb|EFN02326.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 369
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + I + +TD IG +NL +SQ RA
Sbjct: 246 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQRRA 305
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
+ + +YL+ + + ++ G+ P+ T D GR ++R+E+Q+
Sbjct: 306 ETVANYLVSK-GQNPANVTAVGYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQV 361
>gi|83816525|ref|YP_446790.1| OmpA family protein [Salinibacter ruber DSM 13855]
gi|83757919|gb|ABC46032.1| OmpA family protein [Salinibacter ruber DSM 13855]
Length = 227
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 9/116 (7%)
Query: 63 IVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTDSI 120
+ + R G +P + L L+ L +P+ + ++ H D
Sbjct: 84 VQMRRQGGRAVRVLPADSLFEAGTATLTAAGKKRLRATIAHLETAYPTRAVRVEGHADDT 143
Query: 121 G-------TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+N +S RA + YL R + + + P+ +N T
Sbjct: 144 PLSEALQERFASNWELSAARATAVVRYLSARSALAPSQFAALAYGATDPVASNATA 199
>gi|299133623|ref|ZP_07026817.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
gi|298591459|gb|EFI51660.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
Length = 275
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 7/117 (5%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN---- 126
I + ++ +++ +A L + P +AI HT S T
Sbjct: 150 EIVDQDGRSMFAEGSREPYERTRMLIRKLAAPLRQSP-LRVAIVGHTSSDFTSPRPGYDA 208
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S +RA+ ++ L + G+ S SV G A P+ +D N+R+ I +
Sbjct: 209 FDLSADRANAVRQILERAGLPSTHIFSVSGKADSEPLFPDDP--SLAANRRVTITLM 263
>gi|24213001|ref|NP_710482.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
gi|24193684|gb|AAN47500.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
Length = 589
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
I ++LN+FP I +QSH+ G + N + ++ERA Y + V R I RG+
Sbjct: 504 KIRSLLNEFPGYKIELQSHSSHQGDEEVNQVGTEERAREALEYFFSKTVPFGR-IRFRGY 562
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
P+ K NQRI+ +
Sbjct: 563 GETLPLIPGSGKYEADKNQRIDFYL 587
>gi|16751949|ref|NP_444533.1| TraP protein [Plasmid pIPO2T]
gi|16610017|emb|CAC82763.1| TraP protein [Plasmid pIPO2T]
Length = 186
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 65/197 (32%), Gaps = 24/197 (12%)
Query: 2 IKELGLSMFIMTTISGCGLASR------------EKKKVFLHKSNDTDIVNKRFGSSLDK 49
+ +L + + + ++ C + + + + +++
Sbjct: 1 MHKL-VVLSSILALAACSSPPKPPVVDGSNRHAINTPETAEVIALRAQLAQSEEKLRVEQ 59
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
A + + + P +F + LP+L +
Sbjct: 60 ARPVIAPTVLQPAPPPPVRSRTFSVHFPYNDTNFHLSADDRVQLLPLLA---------NA 110
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
I ++ TD + I+ RA + +LI + S ISV + + N +
Sbjct: 111 RRIEVRGRTDGQRPSTADEKIALNRALAAQRFLIGQ-GVSPAIISVNYVSAGDYVADNFS 169
Query: 169 KVGRQNNQRIEIQIFPR 185
VGR N+R++I++F +
Sbjct: 170 AVGRSLNRRVDIEVFNQ 186
>gi|225164037|ref|ZP_03726322.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2]
gi|224801343|gb|EEG19654.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2]
Length = 253
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 60/187 (32%), Gaps = 21/187 (11%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF------QMQLQDTGIVVSRIGDMITC 74
+ + + TD L+K E D I + D +
Sbjct: 70 TGKSSGEKDNPGTGLTDQ-KAVDLEYLNKLARELYRLLNLDESRTDNPIDIQVTSDGLRV 128
Query: 75 YIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD------SIGTLK 124
+ + L + ++ +A L + I+ HT +
Sbjct: 129 ILYDRNGRPLFVDRGTELTEWGRFVMDNLA-WLIDRDHFYVTIEGHTRAGLTLDDRPSSY 187
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI-F 183
+S +RA+ + L + VS V G+A P+ DT ++NQR+ + +
Sbjct: 188 TLWELSADRANASRRALTEHVVSPALIERVVGYADTRPLL--DTDATSESNQRVTLSLRL 245
Query: 184 PRGNIKK 190
PR + K
Sbjct: 246 PRKHTPK 252
>gi|268679844|ref|YP_003304275.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
gi|268617875|gb|ACZ12240.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
Length = 385
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 17/145 (11%)
Query: 62 GIVVSRIGDMITCYIPVHVSFV-SEVFLEKKF----LPMLQLIATILNKFPSTV-----I 111
G ++ + +P + F L+ + LQ +L I
Sbjct: 233 GQKINIDPNSGAIRLPSGILFDVGSYELKPEAKKQLKETLQPYLEVLLNDADIRDNIDHI 292
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN----RFISVRGFAYKYPIDTND 167
I+ HTDS G+ NNL +SQ+RA + +++ S N R+IS G +Y I N
Sbjct: 293 MIEGHTDSDGSYMNNLDLSQKRAYAVMAFIYSWDESKNALLQRYISAIGRSYSDRIFKNG 352
Query: 168 TKVGRQNNQRIEIQ--IFPRGNIKK 190
+ ++RIEI+ + + I++
Sbjct: 353 LEDKNA-SRRIEIKFSLSNKKAIQE 376
>gi|148253708|ref|YP_001238293.1| hypothetical protein BBta_2207 [Bradyrhizobium sp. BTAi1]
gi|146405881|gb|ABQ34387.1| putative outer membrane protein of unknown function [Bradyrhizobium
sp. BTAi1]
Length = 216
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 58/162 (35%), Gaps = 7/162 (4%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
S + + + S ++ + ++ ++ I I
Sbjct: 51 SVGPQAAPQIDATAQAKQSTFIDSMRNRKTRSLSLGEREQLAEIAATKPKIDLEIQ---F 107
Query: 82 FVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + K + +Q + L+ + + HTD IG+ N +S+ RAD +K
Sbjct: 108 DYNSAAISKTSIQAVQELGKALSDPNLKGSTFMVAGHTDGIGSDGFNQDLSERRADTLKR 167
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
YL+++ + + + G+ D + N+R+++
Sbjct: 168 YLVEKFGLAGQDLVTVGYGKTKLKDAANPAD--PVNRRVQVV 207
>gi|254564195|ref|YP_003071290.1| chemotaxis protein MotB [Methylobacterium extorquens DM4]
gi|254271473|emb|CAX27488.1| putative chemotaxis protein MotB [Methylobacterium extorquens DM4]
Length = 277
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 55/167 (32%), Gaps = 13/167 (7%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV--HVSF 82
+ + ++ + + + + + I +R G ++ +
Sbjct: 107 PDRGYPDAFGQAAASLRQAMQDMPEVAELSKNVI----IAPNRKGLDVSIVDQDGRSMFP 162
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT----DSIGTLKNNLLISQERADVIK 138
+ +L+ + L K P+ IA+ T +S RA ++
Sbjct: 163 EGSSRPNDRTRRLLERLTPTLMKLPN-RIAVTGFTATTRPGTRDTAPPWELSANRALSVR 221
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L G+ +RF SV G A P+ ++ N+R+ + +
Sbjct: 222 DVLAGAGLPDDRFASVTGKADTEPMFPDNPY--LAANRRVTVTLLAE 266
>gi|218506976|ref|ZP_03504854.1| hypothetical protein RetlB5_04850 [Rhizobium etli Brasil 5]
Length = 39
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ GF PI D R N+RIE+++ +
Sbjct: 5 RLVAAGFGEFQPIAPGDAPDARATNRRIELKLTEK 39
>gi|167946599|ref|ZP_02533673.1| OmpA/MotB domain protein [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 126
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ + ++ +N +S RA + YL + R ++ GF + IDT DT
Sbjct: 9 TGYRSTPSSVPSNWELSSARAVSVVRYLASQ-GIPQRRLTAAGFGEFHSIDTGDTPEALS 67
Query: 174 NNQRIE 179
+N+RIE
Sbjct: 68 HNRRIE 73
>gi|167578122|ref|ZP_02370996.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
thailandensis TXDOH]
Length = 267
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 16/135 (11%)
Query: 62 GIVVSRIGDMITCYIPVHVSFV-SEVFLE---KKFLPMLQLIATIL-NKFPSTV-IAIQS 115
+ + D+ + + F + L L IA L ++ + +
Sbjct: 130 AVQTAPSDDVKQFTLDYQLLFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTG 189
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR--- 172
+TD +GT N +S RA+ I + I +G P+ +N G
Sbjct: 190 YTDRLGTDTYNRQLSLARAEAI-REYLTTRGLPGNLIVAQGLGKADPV-SNGCPDGYSAE 247
Query: 173 -----QNNQRIEIQI 182
++R+ I +
Sbjct: 248 AIACLAPDRRVRIDV 262
>gi|170693151|ref|ZP_02884312.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170142149|gb|EDT10316.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 242
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 33/102 (32%), Gaps = 5/102 (4%)
Query: 77 PVHVSFVSEV---FLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ + + L +A + K I + HTD +G N +S
Sbjct: 124 SDALFPFGKSAADTMLPSAKAQLDDVAARIRKHEQVSAIEVVGHTDRLGPESLNGPLSLA 183
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
RA+ ++ YLI I +G P + GR
Sbjct: 184 RANTVRDYLIA-HGLDGSIIQAKGVGASQPRTNCADREGRAL 224
>gi|113460597|ref|YP_718662.1| hypothetical protein HS_0452 [Haemophilus somnus 129PT]
gi|112822640|gb|ABI24729.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 229
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 65/209 (31%), Gaps = 37/209 (17%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+ L L + + + D K + + + EFQ L +
Sbjct: 30 MM--LFLFIAVSFIL-----------NTKRVAEKYDDNQQKIYQA----LQSEFQSNLTN 72
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI----ATILNKFPS--TVIAIQ 114
+ + P + L+ KF +L +++++ + + I+
Sbjct: 73 WKAKIDKESLTFIFTDPEVLFQTGRADLQSKFKEILTAFFPRYMKVIDQYRDFISEVRIE 132
Query: 115 SHTDSIGT--------LKNNLLISQERADVIKSYLIQ------RGVSSNRFISVRGFAYK 160
HT S + N+ +SQER + Y + +S G +
Sbjct: 133 GHTSSDWSRLVSADVAYFENMRLSQERTRSVLEYTYYLPEVENYRGWIKKNVSAVGLSSS 192
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ D R+ ++R+ +I +
Sbjct: 193 KIVLNTDGSENREASKRVTFRIITNAEAQ 221
>gi|325277486|ref|ZP_08143089.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
gi|324097373|gb|EGB95616.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
Length = 435
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 6/167 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
K + + + + + Q R + V
Sbjct: 271 ANPKPPAKALADFAQSPAGQAIVAQQGFVSQQIQALPVPPQAGMPPRYRNLAKQAQRLSV 330
Query: 79 HVSFV-SEVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQERAD 135
+ F L+ K L ++ +A L++ + D T L+S+ RA
Sbjct: 331 NFRFQAGSANLDNKALRDVRRVADYLHQAGKLQGKTVLVGFGDPKLTPGRAALLSRLRAQ 390
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ L + GV+ + V G + P+ N+ + GR +NQR+E+ +
Sbjct: 391 AVRRQLARNGVA---VLQVTGMGAELPVAGNEREQGRLHNQRVEVWV 434
>gi|259907265|ref|YP_002647621.1| Outer membrane protein [Erwinia pyrifoliae Ep1/96]
gi|224962887|emb|CAX54368.1| Outer membrane protein [Erwinia pyrifoliae Ep1/96]
gi|283477078|emb|CAY72976.1| Uncharacterized 24.6 kDa protein in ccpA 3'region; ORF2 [Erwinia
pyrifoliae DSM 12163]
Length = 245
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 70/191 (36%), Gaps = 20/191 (10%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + + + + ++ + R L E + + + IV
Sbjct: 29 TAMMVLFLVVMVASLSSVTQRIQRAEAGEKRRGQDITRLCQRL-----ELRARELNKTIV 83
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV--------IAIQSH 116
V + I+ + FL LQ + ++ + + I I+
Sbjct: 84 VDCHDNRISFG-EAGRFDHNRFFLNPGGQKALQDVVPLVLEAADSEEGKKWFKQIVIEGF 142
Query: 117 TDSIGTLKNNLLISQERADVIK------SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
TD+ G+ NL +S +R++ + +Q+ ++ ++ + +R + N+ +
Sbjct: 143 TDTDGSYLYNLHLSLQRSEWVMCSLLDSRSPLQQHINPHQQVQIRKLFLAGGVSFNNARE 202
Query: 171 GRQNNQRIEIQ 181
++ ++R+E++
Sbjct: 203 SKEASRRVELR 213
>gi|310767897|gb|ADP12847.1| Chemotaxis protein [Erwinia sp. Ejp617]
Length = 343
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 10/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A+ + I + + G I + +E +L+ IA ILN+
Sbjct: 127 EADPRLRALRPHLIINMVQEGLRIQIIDSQNRPMFKTGSAEVESYMRDILRAIAPILNQI 186
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G++S + + V G +
Sbjct: 187 PN-RISLAGHTDDFPYPGGERGYSNWELSADRANASRRELVAGGLNSGKMLRVVGMSDTM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFP 184
+ N+RI + +
Sbjct: 246 KLKNRG--ANDAVNRRISLLVLN 266
>gi|300312289|ref|YP_003776381.1| flagellar motor component protein [Herbaspirillum seropedicae SmR1]
gi|300075074|gb|ADJ64473.1| flagellar motor component protein [Herbaspirillum seropedicae SmR1]
Length = 312
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 56/142 (39%), Gaps = 10/142 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ I ++ G I + + ++ L+ +L I LN P+
Sbjct: 140 NPTLKQFKNQLLIDITSEGLRIQIVDEKNRPMFALASAQLQPYTKEILHEIGRTLNDVPN 199
Query: 109 TVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
I++ HTD+ K +N +S +RA+ + LI G+ ++ + V G + +
Sbjct: 200 -KISLSGHTDATPYSKGEKGYSNWELSADRANASRRELIIGGMDESKVLRVVGLSSAVLL 258
Query: 164 DTNDTKVGRQNNQRIEIQIFPR 185
D D N+RI I + +
Sbjct: 259 DKEDPF--NPINRRISIIVMNK 278
>gi|302877353|ref|YP_003845917.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
ES-2]
gi|302580142|gb|ADL54153.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
Length = 295
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 58/147 (39%), Gaps = 10/147 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + + I ++ G I + + + L+ + +L+ I + LN+
Sbjct: 144 RTDPNLNQFKEQLQIDLTSEGLRIMIIDAKNRPMFEIGSAILQPYTVEILRSIGSTLNRV 203
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I + HTD+ +N +S +RA+ + LI G+ + + V G +
Sbjct: 204 PN-KIGLSGHTDAANYQGGSAGYSNWDLSADRANASRRTLIAGGMGQEKILRVVGLSDSV 262
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+ D N+RI I + + +
Sbjct: 263 LFNPADPYDAH--NRRISIIVMNQKAM 287
>gi|169838279|ref|ZP_02871467.1| hypothetical protein cdivTM_14466 [candidate division TM7
single-cell isolate TM7a]
Length = 36
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I +G P+ +NDT+ GR N+RIE+Q
Sbjct: 4 IETKGNGDLNPVASNDTEEGRAANRRIEVQ 33
>gi|89891400|ref|ZP_01202906.1| hypothetical protein BBFL7_00541 [Flavobacteria bacterium BBFL7]
gi|89516431|gb|EAS19092.1| hypothetical protein BBFL7_00541 [Flavobacteria bacterium BBFL7]
Length = 486
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Query: 78 VHVSFVSEVFLEKKFLPM--LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
V+V F + + + + T + P+ + + D +G+ N +S RA
Sbjct: 382 VNVYFQFNST-KPALYSLGAINTLVTYMKDNPNATATLTGYADELGSPAYNKNLSDRRAK 440
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ L+ GV ++R +S G +D N ++ RQ +R+ ++
Sbjct: 441 MVHDVLVASGVDASR-LSHNGDGEDASVDKNSSEA-RQLVRRVTFRV 485
>gi|156932816|ref|YP_001436732.1| hypothetical protein ESA_00612 [Cronobacter sakazakii ATCC BAA-894]
gi|156531070|gb|ABU75896.1| hypothetical protein ESA_00612 [Cronobacter sakazakii ATCC BAA-894]
Length = 246
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/195 (12%), Positives = 68/195 (34%), Gaps = 28/195 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + + + + ++ + + ++ E + + IV
Sbjct: 29 TAMMVLFLVVMVASLSSVTQRIQKAEQGEKTR---GQDITRLCERLE--LHARNLNKTIV 83
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV--------IAIQSH 116
V + I+ + FL + LQ + ++ + + I I+
Sbjct: 84 VDCHDNRISFG-EAGRFDHNRFFLNAEGQKALQDVVPLVLEAAESEEGKKWFKQIVIEGF 142
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP----------IDTN 166
TD+ G+ NL +S +R++ + L+ + I++ + + N
Sbjct: 143 TDTDGSYLYNLHLSLQRSEWVMCSLLDSRSPLQKNITI----EQQLQIRKLFLAGGVSFN 198
Query: 167 DTKVGRQNNQRIEIQ 181
+ K ++ ++R+E++
Sbjct: 199 NAKESKEASRRVELR 213
>gi|294627796|ref|ZP_06706376.1| lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292597892|gb|EFF42049.1| lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 186
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 62/193 (32%), Gaps = 16/193 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHK-SNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++ L L + + +S C + + ++ + + +Q Q
Sbjct: 1 MRALAL-VGVAFAVSACSSHPKPPTVSGRDRVPVNSPVAAQTLQQEAFSPAPVVVVQHQG 59
Query: 61 TGIVVSRIG-----DMITCYIPVHVSFVSEVFLEKKFLPMLQLIA--TILNKFPSTVIAI 113
V R D + + +F P +A L + +
Sbjct: 60 GPQAVQRQQAPRAADRPLYSVVSVQFPWNSA----QFRPTPAQVAHLRGLIAAGVAHVQV 115
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF-ISVRGFAYKYPIDTNDTKVGR 172
+ TD+ + I++ RA+ K +LI GV S ++ N GR
Sbjct: 116 RGRTDNPNPSSGDEHIARGRAEAAKDWLIGEGVPSGIIDLNFVSAGDYR--SNNRLSDGR 173
Query: 173 QNNQRIEIQIFPR 185
N+R++I+ +
Sbjct: 174 ALNRRVDIEFISK 186
>gi|325955198|ref|YP_004238858.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323437816|gb|ADX68280.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 753
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + L +A +L P+ I+ HTD+ GT NL +S++RA
Sbjct: 638 VGSVKFNFDQSIIRDHDFSFLDKLALLLVDNPTVNFIIEGHTDAAGTESYNLTLSEKRAF 697
Query: 136 VIKSYLIQRGVSSNRFISVRGFA-------YKYPIDTNDTKVGRQNNQRIEIQ 181
+ YL +GV +R + G P++ + + N+R+ I+
Sbjct: 698 AVAQYLEGKGVDFSRM-HILGIGTSAMKYPECKPVEMCE-EWKNFENRRVVIK 748
>gi|259908189|ref|YP_002648545.1| Chemotaxis protein [Erwinia pyrifoliae Ep1/96]
gi|224963811|emb|CAX55313.1| Chemotaxis protein [Erwinia pyrifoliae Ep1/96]
gi|283478118|emb|CAY74034.1| Chemotaxis protein MotB (Motility protein B) [Erwinia pyrifoliae
DSM 12163]
Length = 343
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 10/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A+ + I + + G I + +E +L+ IA ILN+
Sbjct: 127 EADPRLRALRPHLIINMVQEGLRIQIIDSQNRPMFKTGSAEVESYMRDILRAIAPILNQI 186
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G++S + + V G +
Sbjct: 187 PN-RISLAGHTDDFPYPGGERGYSNWELSADRANASRRELVAGGLNSGKMLRVVGMSDTM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFP 184
+ N+RI + +
Sbjct: 246 KLKNRG--ANDAVNRRISLLVLN 266
>gi|91217502|ref|ZP_01254461.1| OmpA/MotB family protein [Psychroflexus torquis ATCC 700755]
gi|91184387|gb|EAS70771.1| OmpA/MotB family protein [Psychroflexus torquis ATCC 700755]
Length = 235
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 64/199 (32%), Gaps = 23/199 (11%)
Query: 3 KELGLSMFIMTTISGC-------GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
K L ++ + G G K DT + + D + E
Sbjct: 38 KRFLLWSALLIVLLGVVGIYFSNGYKQVPKSTFEGIIDKDTLQLKQEVVKIEDTSNPEIA 97
Query: 56 MQLQDTGIVVSRIG-------DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
++ G ++ I + + + + K +L
Sbjct: 98 SKIDKIGESITNIESFKRILQEKKQLTPIGLMFTIDSKMINKSDFVLLDFYIEQYQALNK 157
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA----YKYPID 164
+ I+ +T +GT +NL +S+ R ++ YLI + + I + + + PI
Sbjct: 158 GYLLIEGYTCDLGTKSHNLELSERRNYSVEKYLIAK-GIPSSKIKTKSYGEKFFERRPII 216
Query: 165 TNDTKVGRQNNQRIEIQIF 183
+ R N+R+ + I
Sbjct: 217 ----EESRIENRRVNLSII 231
>gi|86136711|ref|ZP_01055289.1| chemotaxis protein MotB [Roseobacter sp. MED193]
gi|85826035|gb|EAQ46232.1| chemotaxis protein MotB [Roseobacter sp. MED193]
Length = 277
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 65/183 (35%), Gaps = 19/183 (10%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR-------- 67
+G + + ++ +D S E++ Q + ++ + V
Sbjct: 97 TGASDINPMDAQKAQGETGVSDAEKAEEDSKFRAIEEQLQGRGGESMVSVEMSRHIITRV 156
Query: 68 IGDMITCYI----PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT- 122
+ + + V + F +++++A ++ + IAI H S
Sbjct: 157 TDEGLIVELFETDGVSLFEAGGAEPTPLFRDLVRMVAR-VSASVTNDIAISGHIQSHPVV 215
Query: 123 --LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S RA+V ++ L G+ S+R + G A + TN V N R+EI
Sbjct: 216 LAQNPVWEMSHARANVARTLLESGGMKSSRIHRITGHADRKLAVTNPMAV---RNNRVEI 272
Query: 181 QIF 183
+
Sbjct: 273 ILL 275
>gi|238026965|ref|YP_002911196.1| OmpA/MotB [Burkholderia glumae BGR1]
gi|237876159|gb|ACR28492.1| OmpA/MotB [Burkholderia glumae BGR1]
Length = 312
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 17/185 (9%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-------EDEFQMQLQDTGIVVSRIGDM 71
G ++ +S D N + L + + + + +R G
Sbjct: 108 GGNGNATQQAAPARSVPPDSANDARLALLKQQLTALVDENPKLKAFKNQIRLSTTREGLR 167
Query: 72 ITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-----K 124
I + LE +L I +LN+ +++ HTD++
Sbjct: 168 IEIVDSRSRPMFATGSSRLEDYAYDILFQIGGVLNQV-DNRVSLAGHTDAVPYSGGIAGY 226
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+N +S ERA+ + L+ + ++ + VRG A P D + N+RI I +
Sbjct: 227 SNWELSSERANAARRALVAGHLREDKLLQVRGLADVLPFDRGVADA--EVNRRISILVLN 284
Query: 185 RGNIK 189
+ +
Sbjct: 285 KEAER 289
>gi|218677969|ref|ZP_03525866.1| OmpA/MotB domain protein [Rhizobium etli CIAT 894]
Length = 132
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/109 (11%), Positives = 26/109 (23%), Gaps = 15/109 (13%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L ++ ++ C + + G +
Sbjct: 11 LLVASMLLALAACSTTEIASLEEPTAAPMTGQTNDPAPGFE---------------NVAA 55
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
D I L+ + L A LNK P+ ++ +Q
Sbjct: 56 GSEEDFILNVGRRIYFKQDSAALDSVAMATLDNQAAWLNKNPTWLLKLQ 104
>gi|186477722|ref|YP_001859192.1| flagellar motor protein MotB [Burkholderia phymatum STM815]
gi|184194181|gb|ACC72146.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 369
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 10/144 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + G I + ++ ++ +LQ I LN
Sbjct: 147 EANPVLRQFKQQIRIDSTLQGLRIEIVDTQKRPMFATAQAIVQPYMHDILQAIGNTLNDV 206
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 207 PN-RIVVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 265
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
+ N N+RI I + +
Sbjct: 266 NL--NKADPLDPENRRISIIVLNK 287
>gi|330821029|ref|YP_004349891.1| OmpA/MotB [Burkholderia gladioli BSR3]
gi|327373024|gb|AEA64379.1| OmpA/MotB [Burkholderia gladioli BSR3]
Length = 307
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 58/148 (39%), Gaps = 10/148 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + + + +R G I + LE +L I T+LN+
Sbjct: 142 EENPQLRAFKDQIRLSTTREGLRIEIVDSRSRPMFATGSARLEDYASDILFRIGTLLNQV 201
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
++I HTD++ +N +S +RA+ + L+ + ++ + +RG A
Sbjct: 202 -DNRVSIAGHTDAVPYSGGIAGYSNWELSSDRANAARRALVAGHLREDKLLQIRGLADVL 260
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P+D + N+RI I + + +
Sbjct: 261 PLDQGAADA--EVNRRISILVLNKQAER 286
>gi|254785203|ref|YP_003072631.1| hypothetical protein TERTU_1036 [Teredinibacter turnerae T7901]
gi|237686899|gb|ACR14163.1| conserved hypothetical OmpA family protein [Teredinibacter turnerae
T7901]
Length = 238
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 67/185 (36%), Gaps = 18/185 (9%)
Query: 10 FIMTTISGC----GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
F + +SG + E+ K L ++ + ++ + + + Q Q++
Sbjct: 64 FFLGALSGAYLGEQNKNHERNKTALKEAETSLTSSRNEVAMQQRVIAKMQKQVEQP---- 119
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ E L + +Q +A + PS + + D GT +
Sbjct: 120 ---------IEFLVYFPTGEDALSHQDSQRIQSLANYMTDNPSLRVRLDGFADPRGTDEY 170
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N ++S+ERA + L+ R +R I + + T K +++ I+++
Sbjct: 171 NNVLSEERARSVVDALVAR-GIDSRRIEYQAHGASMSMATAGDKDAYALERKVRIEVYSP 229
Query: 186 GNIKK 190
+K
Sbjct: 230 KLTRK 234
>gi|163786938|ref|ZP_02181386.1| hypothetical protein FBALC1_17172 [Flavobacteriales bacterium
ALC-1]
gi|159878798|gb|EDP72854.1| hypothetical protein FBALC1_17172 [Flavobacteriales bacterium
ALC-1]
Length = 278
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 15/124 (12%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ GD I + +L K+ P+L IA IL + + I+ H ++
Sbjct: 155 KEGDKILL--DNLLFRTGYSYLTKESKPVLDKIAVILAERTNVYFTIEGHVCCTQGERDA 212
Query: 127 LLI-------SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ S RA I YL+++GV R V G K P+ + ++R+E
Sbjct: 213 IDRKTKKRNLSVARAKYIYDYLVKKGVRPYRMKFV-GMRRKEPLGGEP-----EFDRRVE 266
Query: 180 IQIF 183
I +
Sbjct: 267 ILVT 270
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + L L + + + I+I D G+ NL++SQ+RAD I
Sbjct: 24 EVYFDTDKYNIPETEHSRLLLFLSKVEEMDIEKISIYGFCDDRGSDNYNLVLSQQRADAI 83
Query: 138 KSYLIQRGVSSNRFISVRGFAY--KYPIDTNDTKVGRQNNQRIEIQIFP 184
K+ + +V G + + R N+++EI + P
Sbjct: 84 KTVFSNNEFDESVITNVDGKGEILLNIVHEENLSKIRGLNRKVEIIVKP 132
>gi|307546933|ref|YP_003899412.1| flagellar motor protein MotB [Halomonas elongata DSM 2581]
gi|307218957|emb|CBV44227.1| flagellar motor protein MotB [Halomonas elongata DSM 2581]
Length = 317
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 13/143 (9%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
L + D+ + + G+ + + + + + +L+L+A +LN+
Sbjct: 132 DLKQLRDQLRFDMTPEGLRIQ-----LVDTEQRPMFELGSDRVAPYMRDLLRLMAPLLNE 186
Query: 106 FPSTVIAIQSHTDSIGTLKN-----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
P+ ++I HTDS+ L N +S RA+ + L+ G+ S + + V GFA +
Sbjct: 187 LPN-DLSISGHTDSLAYLNGFQGYGNWELSSARANASRRELVAGGLDSAKLLRVAGFADQ 245
Query: 161 YPIDTNDTKVGRQNNQRIEIQIF 183
+ DT+ N+RIE+ +
Sbjct: 246 --VVMPDTEPSDPVNRRIELLVL 266
>gi|126735562|ref|ZP_01751307.1| Outer membrane protein, OmpA/MotB family [Roseobacter sp. CCS2]
gi|126714749|gb|EBA11615.1| Outer membrane protein, OmpA/MotB family [Roseobacter sp. CCS2]
Length = 599
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/164 (13%), Positives = 51/164 (31%), Gaps = 8/164 (4%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT--CYIPVHVS 81
+ ++ + V+ + + I R + +
Sbjct: 431 QVEEDRVQPQTSQGDVDSLRLALMATQNAAIDRTFSLRQIRQVREVRALAPEIELDTITF 490
Query: 82 FVSEVFLEKKFLPMLQLIA----TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ ++ L +A I+ P V I+ HTD++G NL +S RA+ +
Sbjct: 491 ATASAAIQPSQAEELTNLAVAISNIIEDDPRQVFLIEGHTDAVGDASYNLALSDRRAETV 550
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + +G+ + + N+R I+
Sbjct: 551 ALAMTEYFDIPPENLITQGYGESALKVSTPGPE--RANRRASIR 592
>gi|323705966|ref|ZP_08117537.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534764|gb|EGB24544.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 230
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 57/148 (38%), Gaps = 19/148 (12%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATI---LNKFP 107
++ + +++ + +S + F + L+ + L + P
Sbjct: 62 NQLLNEFKNSDLSLSIDPQTGAISFSEGIFFDKDKFELKDEGKRYLNEFFPRYISILMDP 121
Query: 108 STV-----IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV---------SSNRFIS 153
I ++ HTD G NL +SQ+RA + Y++Q + +I+
Sbjct: 122 KFKKYISQIIVEGHTDDTGDYVYNLELSQKRAFEVVRYILQSDIKGIDSKVKSDLMPYIT 181
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G +Y I N KV R+ ++R+E +
Sbjct: 182 ANGRSYSQLIIENG-KVNREKSRRVEFK 208
>gi|313191694|emb|CBW30515.1| putative outer membrane protein A [Bordetella petrii]
gi|313191698|emb|CBW30516.1| putative outer membrane protein A [Bordetella petrii]
gi|313191702|emb|CBW30517.1| putative outer membrane protein A [Bordetella petrii]
Length = 164
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + + + + L+ + +L +A + I HT
Sbjct: 66 VAQAPAKPTPMATKVVFNA-DTFFDFDKSTLKPEGRQLLDQVAQQASGIDLETIIAVGHT 124
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
DSIGT N +S+ RA +KSYL+ +GV NR I G
Sbjct: 125 DSIGTEAYNQKLSERRAASVKSYLVSKGVDPNR-IYTEGKG 164
>gi|222081460|ref|YP_002540823.1| hypothetical protein Arad_7805 [Agrobacterium radiobacter K84]
gi|221726139|gb|ACM29228.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 199
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 60/169 (35%), Gaps = 12/169 (7%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ-LQDTGIVVSRIGDMITCY---- 75
A + + T + K G++ + + + G V+ + +
Sbjct: 24 APSLSNAQQVTEQRITSSLGKLTGAAPIVDVELLRQEATNGAGKTVATLPNWSKVTHLPQ 83
Query: 76 -IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS---TVIAIQSHTDSIGTLKNNLLISQ 131
+ V +E + L LIA L P+ I H + G K+N +S
Sbjct: 84 MVVEIDFQNDSVAIEPRSYRTLGLIADAL-HHPNLWAYKFLIVGHASATGGDKHNFELSS 142
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+RAD IK L + + G +PID K +N+R+++
Sbjct: 143 KRADAIKEALATTFAVDSERLYAVGVGEYFPID--AAKADAADNRRVQL 189
>gi|319956779|ref|YP_004168042.1| ompa/motb domain protein [Nitratifractor salsuginis DSM 16511]
gi|319419183|gb|ADV46293.1| OmpA/MotB domain protein [Nitratifractor salsuginis DSM 16511]
Length = 490
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 15/147 (10%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL-----IATILNKFPST- 109
+ I + + + + L+++ L+ IA +++
Sbjct: 328 KETLGKRIAIDKKSGALRLS-SKILFDKGSAELKEEAKAELKDTFEKYIAALMSNRAIRP 386
Query: 110 ---VIAIQSHTDSIGTLKNNLLISQERADVIKSY----LIQRGVSSNRFISVRGFAYKYP 162
I I+ HTDS G NL +SQ+RA + +Y I + +++ G AY P
Sbjct: 387 YLDRIIIEGHTDSDGGYLYNLELSQKRALAVMNYLLSLPIAQKYHLKKYLVASGRAYMDP 446
Query: 163 IDTNDTKVGRQNNQRIEIQIFPRGNIK 189
I N ++ ++RIEI+ R +
Sbjct: 447 IIKNG-VEDKEASRRIEIKFTLRNREQ 472
>gi|209965626|ref|YP_002298541.1| OmpA family protein [Rhodospirillum centenum SW]
gi|209959092|gb|ACI99728.1| OmpA family protein [Rhodospirillum centenum SW]
Length = 314
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 51/173 (29%), Gaps = 39/173 (22%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATIL------- 103
+ L G+ V+ + + + F + ++ ++++A IL
Sbjct: 105 QSLEASLDRQGVRVTLDPESGILRLSGDLLFETGKAVYREEADRTVKVMADILGSVLPCF 164
Query: 104 -----NKFPSTV------IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR-- 150
P + ++ HTD SQ D + + S R
Sbjct: 165 AEGASVACPGERMPILEAVLVEGHTDRQPFRNVPPAQSQALNDRLSTERALAVFQSLRET 224
Query: 151 --------------FISVRGFAYKYPI--DTNDTKVGRQNNQRIE--IQIFPR 185
+ V G+ + P+ T+ + N+RI+ + R
Sbjct: 225 SPVLETLRNPSGQPLLGVSGYGERRPLPEAQGTTEEDYRRNRRIDLRFVLSSR 277
>gi|116620375|ref|YP_822531.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223537|gb|ABJ82246.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 237
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/207 (11%), Positives = 60/207 (28%), Gaps = 33/207 (15%)
Query: 6 GLSMFIMTTISGCGLASREKKKV--------FLHKSNDTDIVNKRFGSSLD-------KA 50
+++FI+ + + + D K
Sbjct: 29 LMALFIVLWLMNSSTKVKSSISGYFRDPRGFTRTLGAGPANSGEGLSLRTDGLLDIRRKL 88
Query: 51 EDEFQMQLQ----DTGIVVSRIGDMITCYI----PVHVSFVSEVFLEKKFLPMLQLIATI 102
E+ + + + S G+ + + + +L+++A
Sbjct: 89 EEALRAMPEFSKLRDNVKFSVTGEGLRIDLLENDQGMFFVSGSPAPTRAGEELLRVLARE 148
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS-------SNRFISVR 155
+ + P++++ I+ HTD+ ++ + + VR
Sbjct: 149 IGRLPNSLV-IEGHTDAKPFRNARPAEGYSNWELAADRANAARRLLHLFGVRPEQVVEVR 207
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQI 182
GFA + P N+ N+R+ + +
Sbjct: 208 GFADQKPF--NERDRFDARNRRVSVVV 232
>gi|281421739|ref|ZP_06252738.1| outer membrane protein [Prevotella copri DSM 18205]
gi|281404234|gb|EFB34914.1| outer membrane protein [Prevotella copri DSM 18205]
Length = 381
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 38/117 (32%), Gaps = 9/117 (7%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD-SIGTLKNN 126
+ + ++ + ++ + LNK P + + + D G N
Sbjct: 270 VEKKVEEIRRDIFFTINSYKIAPAEDAKIRGVVDFLNKNPEAKVVVTGYADKGTGNDVIN 329
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYK-YPIDTNDTKVGRQNNQRIEIQI 182
I+ +RA + L ++ + I+ + P N N R+ I I
Sbjct: 330 DRIAAKRAAAVVWMLTKKYNIPSERITEESKGARVQPFAEN------AEN-RVTIMI 379
>gi|83717436|ref|YP_439684.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia
thailandensis E264]
gi|83651261|gb|ABC35325.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
thailandensis E264]
Length = 298
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 16/135 (11%)
Query: 62 GIVVSRIGDMITCYIPVHVSFV-SEVFLE---KKFLPMLQLIATIL-NKFPSTV-IAIQS 115
+ + D+ + + F + L L IA L ++ + +
Sbjct: 161 AVQTAPRDDVKQFTLDYQLLFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTG 220
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR--- 172
+TD +GT N +S RA+ I + I +G P+ +N G
Sbjct: 221 YTDRLGTNTYNRQLSLARAEAI-REYLTTRGLPGNLIVAQGLGKADPV-SNGCPDGHSAE 278
Query: 173 -----QNNQRIEIQI 182
++R+ I +
Sbjct: 279 AIACLAPDRRVRIDV 293
>gi|307824077|ref|ZP_07654304.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307734861|gb|EFO05711.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 302
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 61/146 (41%), Gaps = 9/146 (6%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + + ++ G I + + ++ E + +L+ +A ++N+ P+
Sbjct: 140 PELNEFKEQIKLEITSEGLRILIVDAQNRPMYKLASAETEPQIKLILRALAPVINELPN- 198
Query: 110 VIAIQSHTDSIGTLKNN-----LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+++ HTD+ N +S +RA+ + L Q G++ + + V G + P
Sbjct: 199 KVSLNGHTDARPFPPNQKKYTNWELSSDRANAARYELNQAGLAEEKILRVIGLSSSVP-Y 257
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + N+RI I + + ++
Sbjct: 258 SATAEPLDPINRRISIIVMNKKTEQE 283
>gi|134294329|ref|YP_001118064.1| flagellar motor protein MotB [Burkholderia vietnamiensis G4]
gi|134137486|gb|ABO53229.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
Length = 338
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + +G I + +S +E +L+ I LN
Sbjct: 148 EANPTLRQFRQQIRIDSTLMGLRIEIVDSQKRPMFAMSSNNVEPYMRDILREIGKTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI + + R +
Sbjct: 267 NL--NKADPLDPENRRISVIVLNRKS 290
>gi|298291414|ref|YP_003693353.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
gi|296927925|gb|ADH88734.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
Length = 202
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 56/165 (33%), Gaps = 6/165 (3%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
L +++ + + + + + + + + L V+ +
Sbjct: 35 SLTNQQILQGLTATTQEEPTITAQLLRQMAEQAVANNVPLDLNKSAVAAQLFKLAQITVQ 94
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFP---STVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + + I+ L P + I +TD+ GT NNL +SQ RAD
Sbjct: 95 IQFALGSDIIRPESYATIGAISDAL-HHPILFNYHFLIVGNTDTTGTRANNLKLSQARAD 153
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+K L+ + G + ND N+R+++
Sbjct: 154 AVKQALVTVFGVDPARLEAVGLGQEDLQTPNDP--TNPINRRVQL 196
>gi|197124507|ref|YP_002136458.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|196174356|gb|ACG75329.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
Length = 357
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
P + +++ D+ + + +SQ AD L + + R +S G+ + P+ N
Sbjct: 279 PGVAVRVEAFVDATPDAQADQRLSQAMADAAIGRLREL-GVAERRLSGVGYGGERPLLPN 337
Query: 167 DTKVGRQNNQRIEIQ 181
T GR N+R+EI
Sbjct: 338 FTVRGRTANRRLEIV 352
>gi|153808204|ref|ZP_01960872.1| hypothetical protein BACCAC_02490 [Bacteroides caccae ATCC 43185]
gi|149129107|gb|EDM20323.1| hypothetical protein BACCAC_02490 [Bacteroides caccae ATCC 43185]
Length = 375
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 58/143 (40%), Gaps = 10/143 (6%)
Query: 41 KRFGSSLDKAEDEFQMQLQD---TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
++ ++ + Q L++ + V + + ++ LP ++
Sbjct: 235 DGELNTANRQINGLQKDLEECRTKVVPVETVVKTARVPESIITFRQGRSSVDASQLPNVE 294
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A+ + K+P + + I+ + G+++ N I+ RA+ +K+ L+ + + I+ G
Sbjct: 295 RVASYMKKYPDSKVIIKGYASPEGSVEVNARIAAARAEAVKTILVNKYKINASRITAEGQ 354
Query: 158 AYKYPIDTNDTKVGRQNNQRIEI 180
+ T+ N R+ I
Sbjct: 355 G----VGDMFTEPDW--N-RVSI 370
>gi|239817126|ref|YP_002946036.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
gi|239803703|gb|ACS20770.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
Length = 315
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 75/188 (39%), Gaps = 17/188 (9%)
Query: 11 IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF-------QMQLQDTGI 63
++ + G G+ + + +++ D + +S+ + D+ + I
Sbjct: 78 SISVVPGGGMDPSTRADGEVQRADAEDDADADRLASMKERLDKLIENSPVFRQFRSQILI 137
Query: 64 VVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT---- 117
++ G + + + ++ + +L+ + LN+ P+ I + HT
Sbjct: 138 DITTEGLRLQIVDNENRPMFDLASAQVVPHMRAILRELGPTLNELPN-KITLSGHTDAFV 196
Query: 118 DSIGTLKN-NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
S G N +S +RA+ + L+ G++ N+ + V G A +D ++ + N+
Sbjct: 197 YSNGDRSYGNWELSADRANASRRELVMGGMAENKVLRVVGLADSMHLDRSNPR--NPINR 254
Query: 177 RIEIQIFP 184
RI I +
Sbjct: 255 RISIILLN 262
>gi|332663336|ref|YP_004446124.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332332150|gb|AEE49251.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 665
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 54/142 (38%), Gaps = 7/142 (4%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+ +D + + +++ + + Y + +E L
Sbjct: 528 NVTAPVDSDKPKKTKVIEEDSVKTNMKVRKTQRYTKSFLFKFDSDEMEFNEQDKLDAFVA 587
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ I I + D IG NL +S++RA I YL+ +G R I+++G+
Sbjct: 588 TIAGKDIQRIEIDGYADDIGDNGYNLELSEKRAKKIALYLVDKGYPVTR-IALKGYGEI- 645
Query: 162 PIDTNDTKVGRQNNQRIEIQIF 183
+ ++ N+++E++I
Sbjct: 646 -----TDESLKKLNRKVELKII 662
>gi|271500049|ref|YP_003333074.1| OmpA/MotB domain-containing protein [Dickeya dadantii Ech586]
gi|270343604|gb|ACZ76369.1| OmpA/MotB domain protein [Dickeya dadantii Ech586]
Length = 376
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 13/146 (8%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A+ + I + G I + + +E +L+ IA ILN
Sbjct: 123 EADPRLRALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMSDILRAIAPILNDI 182
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + LI G++ + + V G A
Sbjct: 183 PN-KISLSGHTDDAQYAMGERGYSNWELSADRANASRRELIAGGLADGKVLRVVGMADTM 241
Query: 162 PI--DTNDTKVGRQNNQRIEIQIFPR 185
+ + N+RI + + +
Sbjct: 242 NLKQAKGGSD---AINRRISLVVLNK 264
>gi|332293116|ref|YP_004431725.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332171202|gb|AEE20457.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 429
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 62/171 (36%), Gaps = 13/171 (7%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSL-DKAEDEFQMQLQDTGI----VVSRIGDMITCYI 76
RE V + I + G+ + D+ E + G +S D+I I
Sbjct: 261 DREPNTVSGVAVDTKGIAVDKNGNGVPDELESSLDARYAKKGEVNAPSISSGDDVIKKLI 320
Query: 77 PV---HVSFVSEVFLEKK--FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+V F + + L + + + + + + D IG +N +S+
Sbjct: 321 EDGYVNVYFQFNST-KPETYSLESINYLIKYMTENSGASAQLVGYADEIGNASSNQRLSE 379
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+RA ++K ++ S +SV G + + RQ +R+ ++
Sbjct: 380 KRAQMVKDIMVAA-GISADRLSVTGNGEDASV-DKASAPARQLVRRVTFKL 428
>gi|284046858|ref|YP_003397198.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
gi|283951079|gb|ADB53823.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
Length = 615
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 53/136 (38%), Gaps = 8/136 (5%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + D + +R G + + V L + +++ + + + +
Sbjct: 483 RDAVMDGAVCDARAGSTVDLD-SGALFAYDSVQLRPGAIELVEGLCERRLLEGAATLLVV 541
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+TD+ G N ++S+ +A ++ L+ V+ R + VRG P
Sbjct: 542 GYTDATGPAAYNRVLSRRQAARVRDVLLGEAVTRPRTVVVRGLGEARPRTDGAD------ 595
Query: 175 NQ-RIEIQIFPRGNIK 189
N+ RI ++ PRG +
Sbjct: 596 NRIRIVVRPAPRGATE 611
>gi|120613045|ref|YP_972723.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120591509|gb|ABM34949.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
Length = 312
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 62/175 (35%), Gaps = 11/175 (6%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--V 80
+ + + + + + + + I V+ G I + +
Sbjct: 114 NARAEQARQDQMRIKALQAKIDALISE-NPRLKEFKSQIRIDVTPDGLQIQIVDDQNRPM 172
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERAD 135
++ +L+ I + L + I++ HTD+ +N +S +RA+
Sbjct: 173 FDSGSALVKPYMRDILREIGSALGGVEN-RISLAGHTDAAPYGNGDRGYSNWELSADRAN 231
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ L+ G+ + V G A ++ ++ + N+RI I I + ++
Sbjct: 232 ASRRELVAAGMPDAKLGRVVGLAASDLLEPDNPRA--PVNRRITITILTKEAEER 284
>gi|251789151|ref|YP_003003872.1| flagellar motor protein MotB [Dickeya zeae Ech1591]
gi|247537772|gb|ACT06393.1| OmpA/MotB domain protein [Dickeya zeae Ech1591]
Length = 376
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 13/146 (8%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A+ + I + G I + + +E +L+ IA ILN
Sbjct: 123 EADPRLRALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMSDILRAIAPILNDI 182
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + LI G++ + + V G A
Sbjct: 183 PN-KISLSGHTDDAQYAMGERGYSNWELSADRANASRRELIAGGLADGKVLRVVGMADTM 241
Query: 162 PI--DTNDTKVGRQNNQRIEIQIFPR 185
+ + N+RI + + +
Sbjct: 242 NLKQAKGGSD---AINRRISLVVLNK 264
>gi|124268058|ref|YP_001022062.1| chemotaxis signal transduction protein CheY [Methylibium
petroleiphilum PM1]
gi|124260833|gb|ABM95827.1| Chemotaxis signal transduction protein CheY [Methylibium
petroleiphilum PM1]
Length = 320
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 63/177 (35%), Gaps = 24/177 (13%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH----V 80
K S + + + G K ++ + I D + I +
Sbjct: 117 KATRAQQASAEAESLKMLKGRVESKLANDPRFNELKAQIRFDMTADGLRIQIVDEQNRPM 176
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERAD 135
++ +L+ I +L + P+ + ++ HTD+ +N +S +RA+
Sbjct: 177 FATGSAVVQPYMRELLRTIGGVLAEVPN-KLTLEGHTDTAAFSAGAGGYSNWELSADRAN 235
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYK------YPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ LI G++ + + V+G A P++ N+RI I + R
Sbjct: 236 ASRRELIAGGLADEKVLRVQGLAASSLFDREQPLNP--------VNRRISIIVMNRE 284
>gi|310765241|gb|ADP10191.1| Outer membrane protein [Erwinia sp. Ejp617]
Length = 245
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 70/191 (36%), Gaps = 20/191 (10%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + + + + ++ + R L E + + + IV
Sbjct: 29 TAMMVLFLVVMVASLSSVTQRIQRAEAGEKRRGQDITRLCQRL-----ELRARELNKTIV 83
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV--------IAIQSH 116
V + I+ + FL LQ + ++ + + I I+
Sbjct: 84 VDCHENRISFG-EAGRFDHNRFFLNPGGQKALQDVVPLVLEAADSEEGKKWFKQIVIEGF 142
Query: 117 TDSIGTLKNNLLISQERADVIK------SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
TD+ G+ NL +S +R++ + +Q+ ++ ++ + +R + N+ +
Sbjct: 143 TDTDGSYLYNLHLSLQRSEWVMCSLLDSRSPLQQHINPHQQVQIRKLFLAGGVSFNNARE 202
Query: 171 GRQNNQRIEIQ 181
++ ++R+E++
Sbjct: 203 SKEASRRVELR 213
>gi|87121845|ref|ZP_01077731.1| flagellar motor aparatus [Marinomonas sp. MED121]
gi|86162874|gb|EAQ64153.1| flagellar motor aparatus [Marinomonas sp. MED121]
Length = 258
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 43 FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIAT 101
+ + ++ ++ + V + GD + + F E L + + + +
Sbjct: 112 IKAMAEVVSEQIEITQLSNVVTVLQNGDQLIITVDGQTLFESGESELSWQSDYIFEELIK 171
Query: 102 ILNKFPSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ + I I+ HTD+I +N +S RA + Y ++ + ++ G+
Sbjct: 172 MFKFYFEFSINIKGHTDNIPIRTVKFPSNWELSAIRATTVLRYFLEE-GIGAQRMTATGY 230
Query: 158 AYKYPIDT 165
A PI
Sbjct: 231 ADSVPIAP 238
>gi|224825768|ref|ZP_03698872.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
gi|224601992|gb|EEG08171.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
Length = 325
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 9/121 (7%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT------LKNNLL 128
+ + ++F +LQ + + + + HTDS+ +N
Sbjct: 172 TDKQGMFERGSAVINERFKHLLQKMGQMF-AHIDNQLLLVGHTDSLQYKGQDYAAFSNWS 230
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188
+S RA + L+ G++SN + V G A + P+D N+RIE+ + G
Sbjct: 231 LSSNRAMAARMQLLLGGMASNGILQVVGMADRAPLDARHPDA--ALNRRIELLVLTTGQA 288
Query: 189 K 189
+
Sbjct: 289 Q 289
>gi|298386545|ref|ZP_06996101.1| OmpA family protein [Bacteroides sp. 1_1_14]
gi|298260922|gb|EFI03790.1| OmpA family protein [Bacteroides sp. 1_1_14]
Length = 374
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ LP ++ +A+ + K P T + I+ + G+++ N I++ RA+ +K+
Sbjct: 277 FRQGRSVVDASQLPNVERVASYMKKHPDTRVVIKGYASPEGSIEVNDRIAKARAEAVKNI 336
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
L+++ + I+ G + T+ N R+ I
Sbjct: 337 LVKKYKINIDRITAEGQG----VGDMFTEPDW--N-RVSI 369
>gi|294083749|ref|YP_003550506.1| OmpA/MotB domain-containing protein [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663321|gb|ADE38422.1| OmpA/MotB domain protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 270
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+V + PIDTN T G+ NN+RI+I++
Sbjct: 214 VFAVSAYGKTRPIDTNSTSSGKANNRRIDIRLL 246
>gi|209883450|ref|YP_002287307.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
gi|209871646|gb|ACI91442.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
Length = 323
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLLI 129
+ + LQ+IA +N+ P TV I+ HTD++G+ +NL +
Sbjct: 198 IDLDTINFETGSWDIPPDQAAKLQVIADGMNRAIQRNPQTVFLIEGHTDAVGSDVDNLSL 257
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
S RA+ L Q+ ++ +G+ +Y D
Sbjct: 258 SDRRAESAAELLTQQFGVPPENLTSQGYGEQYLKVATDGAE 298
>gi|88798781|ref|ZP_01114364.1| ABC-type phosphate transport system, periplasmic component
[Reinekea sp. MED297]
gi|88778544|gb|EAR09736.1| ABC-type phosphate transport system, periplasmic component
[Reinekea sp. MED297]
Length = 445
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
L+ K + L +A + + + + +D L+S+ R +K
Sbjct: 344 FRPGTNHLDNKAMDDLDRLAAFMARPENKDRKLILIGFSDQQNNEFRAQLVSEARVIQVK 403
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L ++G+ S+ ++ G+ + P+ +N NQRIE+ I
Sbjct: 404 RALAEKGIQSS---ALTGYGHLNPVASNVDPKYALRNQRIEVWI 444
>gi|238784596|ref|ZP_04628602.1| Lateral flagellar proton motor protein B [Yersinia bercovieri ATCC
43970]
gi|238714465|gb|EEQ06471.1| Lateral flagellar proton motor protein B [Yersinia bercovieri ATCC
43970]
Length = 256
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 58/165 (35%), Gaps = 15/165 (9%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQL----QDTGIVVSRIGDMITCYIPVH----VSFVS 84
+ V + G +++ + + + + + I + S
Sbjct: 68 EQSLEEVVDKSGKEMEELSRIIMQITSTYDAQSNLKMEVVPQGLRILIQDDKQRDMFQRS 127
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT----DSIGTLKNNLLISQERADVIKSY 140
L F +L +A N+ I I HT NN +S ERA +
Sbjct: 128 SALLTPFFSRLLAELAPAFNEM-DNKIIITGHTDASRYRDQVRYNNWNLSGERALMAHKA 186
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L++ G+S R + + A + + T+ +N+RIEI + +
Sbjct: 187 LVKGGLSEERVLQINAMADQMLLTP--TEPLAASNRRIEIMVLTK 229
>gi|325278790|ref|YP_004251332.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
20712]
gi|324310599|gb|ADY31152.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
Length = 366
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 39/123 (31%), Gaps = 10/123 (8%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD-SIG 121
+V + + + ++ + + + +A L K P+ + + + D G
Sbjct: 246 VVPEKKTEKLQPIQVNVFFKINSAVIRPEEAGKVDELAAYLQKNPAAQVTLTGYADVQTG 305
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK-YPIDTNDTKVGRQNNQRIEI 180
+ N +S RA + + + I+ P T + R+ I
Sbjct: 306 NHRLNKTLSARRAQAVAD-ALTAKGIAADRITADSQGDTVQPFAT--PEEN-----RVTI 357
Query: 181 QIF 183
I
Sbjct: 358 CIT 360
>gi|319898651|ref|YP_004158744.1| flagellar motor protein MotB [Bartonella clarridgeiae 73]
gi|319402615|emb|CBI76160.1| putative flagellar motor protein MotB [Bartonella clarridgeiae 73]
Length = 384
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 66/174 (37%), Gaps = 13/174 (7%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSS---LDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+ + K + + +++ N +S L + D + + + V I + +
Sbjct: 179 ASSQKRKIQKQKMMAKESEQENNSSENSHALLKELTDLIEGETNNILAHVKPIKEGVMIE 238
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLL 128
+ + V + + ++ +A I+ K + I HTD+ N N
Sbjct: 239 LMDQPKYEMFKVGLSIPTAQTIDLISSMAGIIAKHQG-DVVISGHTDARPYRSNVYDNWQ 297
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S RA + L++ G+ R + V G+A + + D N+RI I I
Sbjct: 298 LSTARAQMAYYMLVRGGLDEKRILRVEGYADRDLKNKKDPYA--AENRRISIFI 349
>gi|328908054|gb|EGG27813.1| putative outer membrane protein A [Propionibacterium sp. P08]
Length = 48
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G P+ +ND++ GR+ N+R+ I +
Sbjct: 15 LVTAGKGEADPVASNDSEAGRRLNRRVTITV 45
>gi|114799688|ref|YP_760523.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
gi|114739862|gb|ABI77987.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
Length = 378
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
L + V L P+L L A + P T + ++
Sbjct: 249 EILPIQAVASCEEELSRLLEAARIEFAPGSVILNVASGPVLDLAARAASDCPGT-LRVEG 307
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
HTD G N +S RA+ +++ +I+RGV +R ++ G+ P+ +N+T+ G
Sbjct: 308 HTDDTGNPGYNDQLSLRRAEAVRAAMIERGVPPDRLVAA-GYGQNNPVSSNETEDG 362
>gi|115524590|ref|YP_781501.1| OmpA/MotB [Rhodopseudomonas palustris BisA53]
gi|115518537|gb|ABJ06521.1| OmpA/MotB [Rhodopseudomonas palustris BisA53]
Length = 280
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 21/188 (11%)
Query: 15 ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVS 66
++ + + +L A + LQD ++
Sbjct: 89 VAAEQSTPFPSPDEGGGMAKTGAQIQAEREFAL--ASASLRQALQDMPEIAEVSKNVMFE 146
Query: 67 RIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI-- 120
+ + I + ++ +++ +A L S I + HT S
Sbjct: 147 ETKEGLNLQIVDQDGRPMFPEGSPVPFQRTKLLIERLAAPLRAT-SLRITLVGHTSSAVL 205
Query: 121 --GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ + +S +RA+ ++ L + G+ +SV G A P+ +D N+R+
Sbjct: 206 PGRSDADGFDLSWQRANAVRQILKREGLPIANVLSVTGKADSEPLFPDDPM--LAANRRV 263
Query: 179 EIQIFPRG 186
I +
Sbjct: 264 TITLLREN 271
>gi|254525153|ref|ZP_05137208.1| chemotaxis MotB protein [Stenotrophomonas sp. SKA14]
gi|219722744|gb|EED41269.1| chemotaxis MotB protein [Stenotrophomonas sp. SKA14]
Length = 320
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 60/180 (33%), Gaps = 19/180 (10%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI----------VVSRIGDM 71
S + + +R L++ E Q + + ++ G
Sbjct: 103 SNDPFQNQKEAVPQPLDQQQRDKQQLEQLMKELQEAISKSQALEPFKDQLLLDLTPEGLR 162
Query: 72 ITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---- 125
I + + + L+ +L +A LN P+ I++ HTD
Sbjct: 163 IQIVDKQNRPMFDLGSATLKPYTQQILHELAEYLNHVPN-RISLTGHTDITAYSAARGYG 221
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + LI G+ ++ V G + + N+RI I + +
Sbjct: 222 NWELSADRANAARRALIDGGLEDSKITRVVGLSSSV-LFDKADPQN-PINRRISIVVMTQ 279
>gi|73539429|ref|YP_299796.1| flagellar motor protein MotB [Ralstonia eutropha JMP134]
gi|72122766|gb|AAZ64952.1| OmpA/MotB [Ralstonia eutropha JMP134]
Length = 325
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 55/139 (39%), Gaps = 10/139 (7%)
Query: 54 FQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ + ++ G I + +E +L+ I ++N P+ +
Sbjct: 138 LKQFRPQLLLDITSEGLRIQILDTQNRPMFRTGRAEVEPYMRAILREIGPVINDLPN-KV 196
Query: 112 AIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
++ HTDS +N +S +RA+ + LI G+ + + V G A P+D +
Sbjct: 197 SLSGHTDSANYSNGERTYSNWELSSDRANASRRELIAGGMQEGKVLRVLGLAATMPLDKS 256
Query: 167 DTKVGRQNNQRIEIQIFPR 185
D N+RI I + +
Sbjct: 257 DLLA--PVNRRISIVVLNQ 273
>gi|183222494|ref|YP_001840490.1| hypothetical protein LEPBI_I3149 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912532|ref|YP_001964087.1| OmpA-family lipoprotein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167777208|gb|ABZ95509.1| OmpA-family lipoprotein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167780916|gb|ABZ99214.1| Putative bacterial outer membrane protein; putative signal peptide
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 189
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 20/197 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K LS+ ++ +S ++ K + + S ++
Sbjct: 1 MKKGFFLSLILLVGLSISFTNCSSSEEKETPKETTSTTTDNTTAVSSRDLNGALLDEIN- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKK-----FLPMLQLIATILNKFP-STVIAIQ 114
V+ + + ++ + + I L K P + I
Sbjct: 60 ----VALKDYRYPDGVRRRGFSYKQADIQAEDFKTWAKDNVAYIKDALAKLPEGYALEIT 115
Query: 115 SHTDSIGTLKN------NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
H D+ G + N SQ R+D +K L+++G+ + R ++ + PI D
Sbjct: 116 GHADASGPEEAEGAKKGNGFYSQIRSDAMKDALVKQGIPAERIVT-KAAGSSKPISGFD- 173
Query: 169 KVGRQNNQRIEIQIFPR 185
N+R+ Q+ +
Sbjct: 174 -EKDAINRRVTFQVVSK 189
>gi|45656163|ref|YP_000249.1| hypothetical protein LIC10258 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599396|gb|AAS68886.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 589
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
I ++LN+FP I +QSH+ G + N + ++ERA Y + V R I RG+
Sbjct: 504 KIRSLLNEFPGYKIELQSHSSHQGDEEVNQVGTEERAREALEYFFSKTVPFGR-IHFRGY 562
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQI 182
P+ K NQRI+ +
Sbjct: 563 GETLPLIPGSGKYEADKNQRIDFYL 587
>gi|329960607|ref|ZP_08298950.1| OmpA family protein [Bacteroides fluxus YIT 12057]
gi|328532480|gb|EGF59274.1| OmpA family protein [Bacteroides fluxus YIT 12057]
Length = 377
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+ + D + + + Q+ ++ I + + ++ LP ++ IA
Sbjct: 240 EDASNRADMLQKQLS-ECQNKKPIIETIVEKAKTLESIVTFRQGSSKIDASQLPNVERIA 298
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ +N+ P + + I+ ++ G+++ N I++ RA+ +KS L ++ + I+ G
Sbjct: 299 SYMNRHPESKVVIKGYSSPEGSIEVNERIARARAESVKSVLTKKYRIAASRITAEGQG 356
>gi|188533603|ref|YP_001907400.1| Chemotaxis protein [Erwinia tasmaniensis Et1/99]
gi|188028645|emb|CAO96507.1| Chemotaxis protein [Erwinia tasmaniensis Et1/99]
Length = 343
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 58/149 (38%), Gaps = 10/149 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A+ + + I + G I + +E +L+ IA ILN+
Sbjct: 127 EADPKLRALRPHLIINMVEEGLRIQIIDSQNRPMFKTGSAEVESYMRDILRAIAPILNQI 186
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+SS + + V G +
Sbjct: 187 PN-RISMAGHTDDFPYAGGERGYSNWELSADRANASRRELVAGGLSSGKMLRVVGMSDTM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ N+RI + + ++
Sbjct: 246 KLKNRG--ANDAVNRRISLLVLNHDAEEQ 272
>gi|78063205|ref|YP_373113.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77971090|gb|ABB12469.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 226
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 50/172 (29%), Gaps = 13/172 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKK-------VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+ +F+ + + + S
Sbjct: 36 TLMVLFLALYVLQLAKYNALDARYQTLARHAESAASASAAATAAVTPEHAPPWLALLDSL 95
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ I + + + I + F + L P+L IA L+ + I ++ H
Sbjct: 96 KSNGRISLVKAPHGVEIGIDAKILFNVGDARLLPDSSPVLNQIAQALSDHATGDILVEGH 155
Query: 117 TDSIGT----LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
TDS+ ++N +S RA + + + ++ G A P+
Sbjct: 156 TDSVPIANAKYESNWELSSARAGSVVR-YLTERGVAPHRLAAIGRADTQPLV 206
>gi|188592087|ref|YP_001796685.1| flagellar motor protein motb [Cupriavidus taiwanensis LMG 19424]
gi|170938461|emb|CAP63448.1| Chemotaxis protein MotB; Flagellar motor rotation, linking torque
machinery to cell wall [Cupriavidus taiwanensis LMG
19424]
Length = 321
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 10/171 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC--YIPVH 79
++++ + K+ + + + + ++ G I
Sbjct: 106 PSDEQRRNEQQEAQRLRALKQRLEQIIENNPVLRQFRPQLLLDITSEGLRIQILDTQNRP 165
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE-----RA 134
+ +E +L+ I +LN+ P+ +++ HTD+ S RA
Sbjct: 166 MFRTGSATVESYMRTILREIGPVLNELPN-KVSLSGHTDAANYSNGERTYSNWELSGDRA 224
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ + LI G+ + + V G A P+D D N+RI I + +
Sbjct: 225 NASRRELIAGGMQEGKVLRVLGLAATMPLDKQDLLA--PVNRRISIVVLNQ 273
>gi|240950213|ref|ZP_04754500.1| hypothetical protein AM305_03163 [Actinobacillus minor NM305]
gi|240295300|gb|EER46086.1| hypothetical protein AM305_03163 [Actinobacillus minor NM305]
Length = 229
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/209 (13%), Positives = 65/209 (31%), Gaps = 38/209 (18%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+ L L + + + N D N+ + + D+ E +
Sbjct: 31 MM--LFLFIAVSFVL-----------NTKKVAENYRDTQNEIYQALKDEFEPNLET---- 73
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI----ATILNKFPST--VIAIQ 114
+ + P + + L+++F L ++N + + + ++
Sbjct: 74 WKARIDKDTLTFIFTDPEVLFKTGDSTLQERFKTTLNEFFPRYMRVINDYKDSINEVRVE 133
Query: 115 SHTDSIGT--------LKNNLLISQERADVIKSYLIQRGVSSNRF------ISVRGFAYK 160
HT S N+ +SQER + Y+ IS G +
Sbjct: 134 GHTSSEWNLNSDEDTAYFENMRLSQERTREVLYYIYHLNTVKEYRQWIKANISSVGLSSS 193
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ N+ +Q ++R+ +I +
Sbjct: 194 K-VILNNGIEDKQASKRVTFRIITNAEEQ 221
>gi|118588413|ref|ZP_01545822.1| probable chemotaxis protein [Stappia aggregata IAM 12614]
gi|118439119|gb|EAV45751.1| probable chemotaxis protein [Stappia aggregata IAM 12614]
Length = 285
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 12/151 (7%)
Query: 41 KRFGSSLDKAEDEFQMQLQ-DTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPM 95
+SL +A E + + I++ + + + + + + +
Sbjct: 125 ATAAASLRQAWQEMPEITEISSNIILEETEEGLNIMLVDQDGRSMFREGSKYPYETTRRL 184
Query: 96 LQLIATILNKFPSTVIAIQSHT----DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ +A +L++ P+ I I HT SI +S ERA++ + L + GV N+F
Sbjct: 185 IAKMAPVLSQMPN-RIEITGHTTAGRQSIDPSYTGWELSSERANIARQILSEYGVPDNQF 243
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
SV G A P+ ND N+RI I +
Sbjct: 244 YSVVGKADTEPLFPNDPY--LAANRRIGILL 272
>gi|187925787|ref|YP_001897429.1| flagellar motor protein MotB [Burkholderia phytofirmans PsJN]
gi|187716981|gb|ACD18205.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 335
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + G I + ++ +E +L+ I LN
Sbjct: 147 EANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATAKDQVEPYMRDILREIGHTLNDV 206
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD+ +N +S +RA+ + LI G+ + + V G A
Sbjct: 207 PN-RIIVQGHTDAAQYAGGEKGYSNWELSADRANASRRELIGGGMDEAKVMRVLGLASTQ 265
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + R +
Sbjct: 266 NL--NKADPMDPENRRISIIVLNRKS 289
>gi|331666564|ref|ZP_08367438.1| putative motility protein [Escherichia coli TA271]
gi|331065788|gb|EGI37672.1| putative motility protein [Escherichia coli TA271]
Length = 307
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 142 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKRLLVELAPVFDSL-DNK 195
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D+ +
Sbjct: 196 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKN 255
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 256 PQS--AGNRRIEIMVLTK 271
>gi|149918662|ref|ZP_01907150.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica
SIR-1]
gi|149820503|gb|EDM79917.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica
SIR-1]
Length = 158
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 45/117 (38%), Gaps = 6/117 (5%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV--IAIQSHTDSIGTLKNNL 127
D + K L L+A + P + + HTD G+ + NL
Sbjct: 46 DACLLPRDEAYFAYDSAEVSDKAERTLTLLAQCFDTGPMRYQGLVVVGHTDPRGSNEYNL 105
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ +R+ +K YL+ GV R I R + +D +++++EI++
Sbjct: 106 DLGLQRSVAVKDYLVDEGVEGGR-IETRSLGERR---ASDDPEDWSDDRKVEIKLAS 158
>gi|223039685|ref|ZP_03609971.1| putative chemotaxis protein MotB [Campylobacter rectus RM3267]
gi|222879068|gb|EEF14163.1| putative chemotaxis protein MotB [Campylobacter rectus RM3267]
Length = 369
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 13/133 (9%)
Query: 62 GIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL----PMLQLIATILNKFPST-----VI 111
G V+ +P + F L+ + +LQ + I
Sbjct: 213 GGKVNIDPSSGVVSLPESILFDTGSYELKDEAKVRLKEILQTYFEAILNSEEIIKHIDRI 272
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS--NRFISVRGFAYKYPIDTNDTK 169
I+ HT+S+G+ NL +SQ+RA + ++ R++ G ++ + N +
Sbjct: 273 VIEGHTNSVGSYMYNLDLSQKRAYSVLDFIYSWNKDKRLERYLIASGRSFSDLVIKNGKE 332
Query: 170 VGRQNNQRIEIQI 182
++RIEI+I
Sbjct: 333 DPDA-SRRIEIKI 344
>gi|73539667|ref|YP_300034.1| OmpA/MotB:SmpA/OmlA [Ralstonia eutropha JMP134]
gi|72123004|gb|AAZ65190.1| OmpA/MotB:SmpA/OmlA [Ralstonia eutropha JMP134]
Length = 292
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 10/117 (8%)
Query: 74 CYIPVHVSFVSE--VFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLIS 130
+F L + + L + + ++TD +GT N +S
Sbjct: 172 LGADALFTFNGSTAAELVPNGHARIDALGQQLAGMKMLKHVDVYAYTDRLGTDAYNKRLS 231
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT------KVGRQNNQRIEIQ 181
Q+RAD +KS L+ + +R ++ +G P+ ++R+EI+
Sbjct: 232 QQRADTVKSLLVAQ-GVDSRLVTAQGMGKADPLSHCGAMPRPKLITCLAPDRRVEIR 287
>gi|86130146|ref|ZP_01048746.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85818821|gb|EAQ39980.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 431
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 63/171 (36%), Gaps = 8/171 (4%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
T+SG + ++ ++ + K++ +G V + +
Sbjct: 266 TVSGVAVNTKGVAVDQNKNGVPDELESTLDNRYAKKSDIPTSTPAIASGDDVIK---KLI 322
Query: 74 CYIPVHVSFVSEVFLEKK--FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
V+V F + + L + + + + + + D IG N +S+
Sbjct: 323 EDGYVNVYFQFNST-KPETYSLESINYLIKYMTENAGASAQLVGYADEIGNASTNQRLSE 381
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
RA +K ++ G+S++R ++ G +D N RQ +R+ ++
Sbjct: 382 RRAQKVKDIMVAAGISASR-LTATGNGEDASVDKNSAPA-RQLVRRVTFKL 430
>gi|167722110|ref|ZP_02405346.1| hypothetical protein BpseD_24064 [Burkholderia pseudomallei DM98]
Length = 43
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G PI N T GR N+R+EI +
Sbjct: 5 GVPASRLEALGKGGAEPIGDNRTPQGRALNRRVEITV 41
>gi|307731388|ref|YP_003908612.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307585923|gb|ADN59321.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 335
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + G I + ++ +E +L+ I LN
Sbjct: 147 EANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATAKDQVEPYMRDILREIGHTLNDV 206
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 207 PN-RIIVQGHTDAVQYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVMRVLGLASTQ 265
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + R +
Sbjct: 266 NL--NKADPLDPENRRISIIVLNRKS 289
>gi|326319083|ref|YP_004236755.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323375919|gb|ADX48188.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 312
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/175 (13%), Positives = 60/175 (34%), Gaps = 11/175 (6%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--V 80
+ + + + + + + + I V+ G I + +
Sbjct: 114 NARAEQARQDQMRIKALQAKIDALISE-NPRLKEFKSQIRIDVTPDGLQIQIVDDQNRPM 172
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERAD 135
++ +L+ I L + I++ HTD+ +N +S +RA+
Sbjct: 173 FDSGSALVKPYMRDILREIGAALGGVEN-RISLAGHTDAAPYGNGDRGYSNWELSADRAN 231
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ L+ G+ + V G A ++ + + N+RI I + + ++
Sbjct: 232 ASRRELVAAGMPDAKLGRVVGLAASDLLEPENPRA--PVNRRITITVLTKEAEER 284
>gi|283834436|ref|ZP_06354177.1| MbhA protein [Citrobacter youngae ATCC 29220]
gi|291069983|gb|EFE08092.1| MbhA protein [Citrobacter youngae ATCC 29220]
Length = 332
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 66/175 (37%), Gaps = 14/175 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF----QMQLQDTGIVVSRIGDMITCYIP 77
+ E K L + T ++ ++ L + + + +T + + + + I
Sbjct: 118 TEENAKKALDVNEKTALLKQKSAQELGELATDINVIARKAHMETNLEMEIVPQGLRVLIK 177
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLIS 130
+ + F +L +A + + I I HTD++ N N +S
Sbjct: 178 DDQNRNMFERGSAKIMPFFKSLLVELAPVFDSL-DNKIIITGHTDAMSYKSNIYNNWNLS 236
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+RA + L G+ ++ + V A + +D + + N+RIEI + +
Sbjct: 237 GDRALSARRVLEDAGMPQDKVMQVSAMADQMLLDAKNPES--AGNRRIEIMVLTQ 289
>gi|283782103|ref|YP_003372858.1| OmpA/MotB domain-containing protein [Pirellula staleyi DSM 6068]
gi|283440556|gb|ADB18998.1| OmpA/MotB domain protein [Pirellula staleyi DSM 6068]
Length = 261
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 7/132 (5%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
++ + + R GD T V L + L A P I ++ HT
Sbjct: 102 ENQHVRIVRPGDRTTIG-TVVYFSEDSATLSEDAEVDLLGAAETFAGKPQ-KIELRGHTS 159
Query: 119 S-----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
K+N ++ +R+ + L+ R + I + P+ T +
Sbjct: 160 RGTPAADSVFKDNWELAYKRSLAVMHVLVDRMKIDPKRIRISVAGPFEPVHTGIDPEKLK 219
Query: 174 NNQRIEIQIFPR 185
N R+E+ +
Sbjct: 220 QNPRVEVFLLEE 231
>gi|146298626|ref|YP_001193217.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146153044|gb|ABQ03898.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 376
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Query: 64 VVSRIGDMITCYIPVHV----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
V D++ I ++ + + ++ T L K PS + I + D
Sbjct: 255 TVVNDKDVVKELINDKYYSVYFDFNKATPIENSTAAIDVVLTYLRKNPSASLDIIGYADQ 314
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+G + N +S +RA+ +K+ + G++S+R + A D++ R+ +R+
Sbjct: 315 VGKAEYNEKLSNQRAENVKTIFEKAGIASSRLNVIPAGADTS--IQKDSEEARRLARRVT 372
Query: 180 IQI 182
++
Sbjct: 373 FKV 375
>gi|292488570|ref|YP_003531454.1| chemotaxis protein MotB [Erwinia amylovora CFBP1430]
gi|292899741|ref|YP_003539110.1| chemotaxis protein [Erwinia amylovora ATCC 49946]
gi|291199589|emb|CBJ46706.1| chemotaxis protein [Erwinia amylovora ATCC 49946]
gi|291554001|emb|CBA21046.1| Chemotaxis protein MotB (Motility protein B) [Erwinia amylovora
CFBP1430]
gi|312172716|emb|CBX80972.1| Chemotaxis protein MotB (Motility protein B) [Erwinia amylovora
ATCC BAA-2158]
Length = 343
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 55/143 (38%), Gaps = 10/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A+ + I + + G I + +E +L+ IA ILN+
Sbjct: 127 EADPRLRALRPHLIINMVQEGLRIQIIDSQNRPMFKTGSAEVESYMRDILRAIAPILNQI 186
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ +++ HTD +N +S RA+ + L+ G++S + + V G +
Sbjct: 187 PN-RLSLAGHTDDFPYAGGERGYSNWELSANRANASRRELVAGGLNSGKMLRVVGMSDTM 245
Query: 162 PIDTNDTKVGRQNNQRIEIQIFP 184
+ N+RI + +
Sbjct: 246 KLKNRG--ANDAVNRRISLLVLN 266
>gi|328542461|ref|YP_004302570.1| OmpA family protein [polymorphum gilvum SL003B-26A1]
gi|326412208|gb|ADZ69271.1| OmpA family protein [Polymorphum gilvum SL003B-26A1]
Length = 283
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 21/181 (11%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLD--KAEDEFQMQLQD--------TGIVVSRIGDMIT 73
EKK ++N D V S A + Q+ + I++ + +
Sbjct: 97 EKKSKQGPEANTHDTVEADIEKSRQFATAAASLRQAFQEMPEITEISSNIIMEETEEGLN 156
Query: 74 CYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN--- 126
I + + + +L +A +L + P+ I I HT + GT +
Sbjct: 157 ILIVDQDGRSMFREGSKYPYETTRRLLAKMAPVLAEMPN-RIQITGHTTTGGTTADPSYT 215
Query: 127 -LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S +RA++ + L + G+ +++ SV G A P+ ND N+RI I +
Sbjct: 216 GWELSSDRANIARMILTEYGIPADQIHSVVGKADSEPLFPNDPF--LAANRRIGILLMSE 273
Query: 186 G 186
Sbjct: 274 A 274
>gi|74317262|ref|YP_315002.1| flagellar motor protein MotB [Thiobacillus denitrificans ATCC
25259]
gi|74056757|gb|AAZ97197.1| outer membrane chemotaxis MotB protein [Thiobacillus denitrificans
ATCC 25259]
Length = 319
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 20/169 (11%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMITCYIPVH--VS 81
+ + + L + + + + I ++ G I + +
Sbjct: 112 AAQAELERLETAKLKQLKQRLEAAIDRNPTLKQFKRQLLIDITSEGLRIQIVDEQNRPMF 171
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADV 136
++ L+ +L IA +LN + I++ HTD+ +N +S +RA+
Sbjct: 172 NLASAELQPYTKVILHEIAQVLNDVEN-RISLSGHTDARPYANGERGYSNWELSADRANA 230
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ LI G+S + + V G A P N+RI I + +
Sbjct: 231 SRRELIVGGMSEAKMLRVVGLASSVPFTQAKPFD--PVNRRISIIVLNK 277
>gi|559851|gb|AAA50841.1| locus involved in self protection to the lipodepsipeptide toxin
tolaasin [Pseudomonas tolaasii]
Length = 163
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 53/176 (30%), Gaps = 32/176 (18%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L + ++ C + + + FG
Sbjct: 9 KSLLVAGSVAALAACSSRNND---------AAGNGAANTFGEY----------------- 42
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL-IATILNKFPSTVIAIQSHTDSIGT 122
V+ +G ++ L + F+ +L A L+ P+ ++ + + D
Sbjct: 43 SVANLGQ----RYNNVYFGYNKYNLNEGFVNLLNAGHAAYLDANPAGLVLVGGNNDENEN 98
Query: 123 LKNNLLISQERADVIKSYLIQR-GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ N+ + + ADV+K Y+ + + + P + N+R
Sbjct: 99 PEYNIALEERAADVLKGYVAGKGKGVDAGLLGNVSNGEELPAVLGHDEAACSKNRR 154
>gi|260842477|ref|YP_003220255.1| flagellar system protein MbhA [Escherichia coli O103:H2 str. 12009]
gi|257757624|dbj|BAI29121.1| flagellar system protein MbhA [Escherichia coli O103:H2 str. 12009]
Length = 261
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+KK T I + + E +M++ G+ V D ++
Sbjct: 72 KKKSATELGELATSITTIARDAHM---EANLEMEIVPQGLRVLIKDDQ-----NRNMFER 123
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSY 140
+ F +L +A + + I I HTD++ N N +S +RA +
Sbjct: 124 GSAQIMPFFKTLLVELAPVFDSL-DNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRV 182
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L + G+ ++ + V A + +D+ + K N+RIEI + +
Sbjct: 183 LEEAGMPEDKVMQVSAMADQMLLDSKNPKS--AGNRRIEIMVLTK 225
>gi|242238952|ref|YP_002987133.1| flagellar motor protein MotB [Dickeya dadantii Ech703]
gi|242131009|gb|ACS85311.1| OmpA/MotB domain protein [Dickeya dadantii Ech703]
Length = 377
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 9/144 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A+ + I + G I + + +E +L+ IA ILN
Sbjct: 123 EADPRLRALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMSDILRAIAPILNDI 182
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + LI G++ + + V G A
Sbjct: 183 PN-KISLSGHTDDARYATGERGYSNWELSADRANASRRELIAGGLTEGKVLRVVGMADTM 241
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
+ N+RI + + +
Sbjct: 242 NLKQAKDGSD-AINRRISLVVLNK 264
>gi|146342457|ref|YP_001207505.1| hypothetical protein BRADO5616 [Bradyrhizobium sp. ORS278]
gi|146195263|emb|CAL79288.1| hypothetical protein; putative signal peptide [Bradyrhizobium sp.
ORS278]
Length = 411
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 37/109 (33%), Gaps = 2/109 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
P F ++ + + + IA + + HT + G N +S RA
Sbjct: 301 PGSTLFYTDPEVRAPYQAWIGKIARRTAAN-HVCLEVAGHTSATGYSGVNDRLSVLRAAY 359
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQRIEIQIFP 184
+K ++ + G + I T ++R+E++I
Sbjct: 360 VKDQILAEDKGLAGRLIASGRGSREMIVGTGRDDPSDALDRRVELRIIN 408
>gi|319944147|ref|ZP_08018425.1| chemotaxis MotB protein [Lautropia mirabilis ATCC 51599]
gi|319742641|gb|EFV95050.1| chemotaxis MotB protein [Lautropia mirabilis ATCC 51599]
Length = 309
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 12/146 (8%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVF-LEKKFLPMLQLIATILNKF 106
+ + ++ G I + + L +++ I +LN+
Sbjct: 129 QVPALEALRDQIRLEMTVDGLSIQIVDASKKPLFASGKSTVLSPNMRELMRTIGKLLNEV 188
Query: 107 PSTVIAIQSHTDSIGTL------KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ +++ HTD+ +N +S ERA+ + L+Q G+ N+ + V+G
Sbjct: 189 EN-PVSLSGHTDATPYAGGSTGGYSNWELSTERANSSRRELVQGGMDPNKILRVQGLGAV 247
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRG 186
P+D T N+RI I +
Sbjct: 248 VPLD--KTNPNDPMNRRIAIVVLNEA 271
>gi|254501723|ref|ZP_05113874.1| OmpA family protein [Labrenzia alexandrii DFL-11]
gi|222437794|gb|EEE44473.1| OmpA family protein [Labrenzia alexandrii DFL-11]
Length = 284
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 57/172 (33%), Gaps = 9/172 (5%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV-- 78
A+ + + E + + + G I
Sbjct: 107 ANTHDTMEAEIEKPRQFATAAASLRQAWQEMPEITEVSTNIILEETEEGLNIMLVDQDGR 166
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD----SIGTLKNNLLISQERA 134
+ + + ++ +A +L++ P+ I I HT ++ +S ERA
Sbjct: 167 SMFREGSKYPYETTRRLIAQMAPVLSRMPN-RIEITGHTTAGAATVDPSYTGWDLSTERA 225
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+V + L + GV +F SV G + P+ ND N+R+ I +
Sbjct: 226 NVARQILSEYGVPDGQFYSVVGKSDTEPLFPNDPY--LAANRRVGILLMAEE 275
>gi|193063256|ref|ZP_03044347.1| putative chemotaxis protein [Escherichia coli E22]
gi|192931164|gb|EDV83767.1| putative chemotaxis protein [Escherichia coli E22]
gi|323160305|gb|EFZ46258.1| lateral flagellar motor protein B [Escherichia coli E128010]
Length = 256
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+KK T I + + E +M++ G+ V D ++
Sbjct: 67 KKKSATELGELATSITTIARDAHM---EANLEMEIVPQGLRVLIKDDQ-----NRNMFER 118
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSY 140
+ F +L +A + + I I HTD++ N N +S +RA +
Sbjct: 119 GSAQIMPFFKTLLVELAPVFDSL-DNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRV 177
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L + G+ ++ + V A + +D+ + K N+RIEI + +
Sbjct: 178 LEEAGMPEDKVMQVSAMADQMLLDSKNPKS--AGNRRIEIMVLTK 220
>gi|134094523|ref|YP_001099598.1| flagellar motor protein MotB [Herminiimonas arsenicoxydans]
gi|133738426|emb|CAL61471.1| Chemotaxis protein MotB (Motility protein B) [Herminiimonas
arsenicoxydans]
Length = 327
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 11/154 (7%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQL 98
+R ++D + + ++ G I + + +S+ L+ +L
Sbjct: 131 ERIEEAIDSI-PSLRQYKNQLLLDITSEGLRIQIVDEKNRPMFALSKADLQPYTKLILHE 189
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFIS 153
IA LN P+ I++ HTD+ +N +S +RA+ + LI G+ + +
Sbjct: 190 IAKTLNDIPN-RISLSGHTDATPYSSGEKSYSNWELSSDRANASRRELIAGGMEEAKMLR 248
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
V G + + + N+RI I + +
Sbjct: 249 VVGLSSAV-LFDQKDPLN-PINRRISIIVMNKKT 280
>gi|49258621|pdb|1R1M|A Chain A, Structure Of The Ompa-Like Domain Of Rmpm From Neisseria
Meningitidis
Length = 164
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ + L + L+++A L++ + ++ HTD +G+ K N +S+ RA V+ +
Sbjct: 18 LFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVAN 77
Query: 140 YLIQRGVSSNRFISVRGFAYKY 161
L+ GV +R IS G
Sbjct: 78 NLVSNGVPVSR-ISAVGLGESQ 98
>gi|331675914|ref|ZP_08376631.1| putative motility protein [Escherichia coli H591]
gi|331076474|gb|EGI47751.1| putative motility protein [Escherichia coli H591]
Length = 261
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 96 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKRLLVELAPVFDSL-DNK 149
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D+ +
Sbjct: 150 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKN 209
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 210 PQS--AGNRRIEIMVLTK 225
>gi|327438403|dbj|BAK14768.1| fructose-2,6-bisphosphatase [Solibacillus silvestris StLB046]
Length = 169
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/167 (8%), Positives = 45/167 (26%), Gaps = 15/167 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L L M ++ CG + +N ++ +K + +
Sbjct: 1 MMKKLLLVMLFALVLAACGTKEMSDDVNNVPGNNTDNVTQGSSKVKEEKITLYKSDENAE 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + + + + +L + + + ++
Sbjct: 61 NTVPFEENFNSDDEELVPFIF----STVNEHDVVLLDYTM----ENKDKSLVL-----NL 107
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRF--ISVRGFAYKYPIDT 165
G + S +++ + I+ PI
Sbjct: 108 GDDIYTIQGSAGANMFVETLARSYFENLPELQDITFIYKGSDEPILD 154
>gi|163795658|ref|ZP_02189623.1| OmpA/MotB [alpha proteobacterium BAL199]
gi|159178954|gb|EDP63489.1| OmpA/MotB [alpha proteobacterium BAL199]
Length = 285
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 43/135 (31%), Gaps = 2/135 (1%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D+ + T + IT + L + L A +
Sbjct: 151 DRFDAAMAQ--LGTPAPAAAPKPSITFANFTVYFDFDKSTLTAQTQSTLIDAANAADDMA 208
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+T I + + D G+ N+ +SQ RAD + L + + F
Sbjct: 209 ATNIEVSGYADRSGSEAYNMALSQRRADAVAKELTTLIGAKAPAMKRLAFGESQNKVVTP 268
Query: 168 TKVGRQNNQRIEIQI 182
V N+R++I+I
Sbjct: 269 DGVKEAKNRRVKIEI 283
>gi|307262353|ref|ZP_07543999.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306867901|gb|EFM99731.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 334
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T +N + I + +TD IG +NL +SQ RA
Sbjct: 241 SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRIGKEASNLKLSQRRA 300
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +Y++ + + ++ G+ P+
Sbjct: 301 ETVANYIVSK-GAPAANVTAVGYGEANPV 328
>gi|300817251|ref|ZP_07097469.1| OmpA family protein [Escherichia coli MS 107-1]
gi|307313501|ref|ZP_07593122.1| OmpA/MotB domain protein [Escherichia coli W]
gi|300530227|gb|EFK51289.1| OmpA family protein [Escherichia coli MS 107-1]
gi|306906669|gb|EFN37180.1| OmpA/MotB domain protein [Escherichia coli W]
gi|323181565|gb|EFZ66985.1| lateral flagellar motor protein B [Escherichia coli 1357]
gi|323379881|gb|ADX52149.1| OmpA/MotB domain protein [Escherichia coli KO11]
Length = 307
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+KK T I + + E +M++ G+ V D ++
Sbjct: 118 KKKSATELGELATSITTIARDAHM---EANLEMEIVPQGLRVLIKDDQ-----NRNMFER 169
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSY 140
+ F +L +A + + I I HTD++ N N +S +RA +
Sbjct: 170 GSAQIMPFFKTLLVELAPVFDSL-DNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRV 228
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L + G+ ++ + V A + +D+ + + N+RIEI + +
Sbjct: 229 LEEAGMPEDKVMQVSAMADQMLLDSKNPQS--AGNRRIEIMVLTK 271
>gi|319902016|ref|YP_004161744.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
gi|319417047|gb|ADV44158.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
Length = 404
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 58/141 (41%), Gaps = 6/141 (4%)
Query: 46 SLDKAEDEFQMQ--LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
++K ++ + + + + +++ + + +K + ++ IA I+
Sbjct: 255 YVEKVVEKIIEKPTIVEKVVQAPPHANVLCDLFNNIYFEFDKADITEKSVSIINKIAQIM 314
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ I TD+ G+L+ N+ +SQ RA+ + + + + + RG K
Sbjct: 315 MTDTNKRYLITGCTDAKGSLQYNMGLSQRRANAVIK-ALTQQGVPSEMLKSRGVGKKISY 373
Query: 164 DTND-TKVGRQNNQR--IEIQ 181
D + R+ +++ +EI
Sbjct: 374 APQDASNEIREGDRKIIVEII 394
>gi|209917443|ref|YP_002291527.1| hypothetical protein ECSE_0251 [Escherichia coli SE11]
gi|209910702|dbj|BAG75776.1| putative motility protein [Escherichia coli SE11]
Length = 262
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 97 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKRLLVELAPVFDSL-DNK 150
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D+ +
Sbjct: 151 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKN 210
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 211 PQS--AGNRRIEIMVLTK 226
>gi|168333865|ref|ZP_02692108.1| hypothetical protein Epulo_03110 [Epulopiscium sp. 'N.t. morphotype
B']
Length = 229
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 66/201 (32%), Gaps = 23/201 (11%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + I+ + G +R + +S D F QL+ +
Sbjct: 27 LMAGLMIIFILISIGFMARINDQSTDEQSKVIASYXLVKSEINDDLMRAFGDQLEMLNME 86
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL---IATIL--NKFPST--VIAIQSHT 117
++ G I P + + L F +L I L N + I I+ HT
Sbjct: 87 ITS-GSTIXFDSPEVLFETGQAALNDTFKSILDKFFPIYLDLIYNNYKEVIKEIRIEGHT 145
Query: 118 DSIGT--------LKNNLLISQERADVIKSYLIQRGVSSNRF------ISVRGFAYKYPI 163
+ NN+ +SQ+R + Y+I S+ ++ G + PI
Sbjct: 146 STEWGNQIDVNKAYFNNMELSQDRTREVLEYVINLPSSAPYRDWLIANMTANGLSSSRPI 205
Query: 164 DTNDTK-VGRQNNQRIEIQIF 183
T ++R+E +I
Sbjct: 206 IDPKTGLEDHIKSRRVEFKIV 226
>gi|307131627|ref|YP_003883643.1| flagellar motor rotation protein motB [Dickeya dadantii 3937]
gi|306529156|gb|ADM99086.1| Flagellar motor rotation protein motB [Dickeya dadantii 3937]
Length = 376
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 13/146 (8%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A+ + I + G I + + +E +L+ IA ILN
Sbjct: 123 EADPRLKALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMSDILRAIAPILNDI 182
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + LI G++ + + V G A
Sbjct: 183 PN-KISLSGHTDDAQYAMGERGYSNWELSADRANASRRELIIGGLAEGKVLRVVGMADTM 241
Query: 162 PI--DTNDTKVGRQNNQRIEIQIFPR 185
+ + N+RI + + +
Sbjct: 242 NLKQAKGGSD---AINRRISLVVLNK 264
>gi|262164958|ref|ZP_06032696.1| outer membrane protein [Vibrio mimicus VM223]
gi|262027338|gb|EEY46005.1| outer membrane protein [Vibrio mimicus VM223]
Length = 81
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I ++ H D G K N +S+ RA + YL NR + +GF P+
Sbjct: 5 QYKIVVEGHADQTGNPKYNQALSERRAGAVTRYLRDTLKLGNRIVE-KGFGESAPVC--- 60
Query: 168 TKVGRQN---NQRIEIQIFPR 185
T N+R+ ++I P+
Sbjct: 61 TVQENAQTGCNRRVVLKIQPQ 81
>gi|300823443|ref|ZP_07103573.1| OmpA family protein [Escherichia coli MS 119-7]
gi|300524061|gb|EFK45130.1| OmpA family protein [Escherichia coli MS 119-7]
gi|320201151|gb|EFW75734.1| Flagellar motor rotation protein MotB [Escherichia coli EC4100B]
Length = 256
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 91 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKRLLVELAPVFDSL-DNK 144
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D+ +
Sbjct: 145 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKN 204
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 205 PQS--AGNRRIEIMVLTK 220
>gi|283784104|ref|YP_003363969.1| lateral flagellar motor protein B [Citrobacter rodentium ICC168]
gi|282947558|emb|CBG87111.1| lateral flagellar motor protein B [Citrobacter rodentium ICC168]
Length = 331
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 21/185 (11%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF-----------QMQLQDTGIVVSR 67
++E+ KV + VN++ K+ E + +T + +
Sbjct: 108 ASPAKEEVKVSEEVAKKAKDVNEKTALLKKKSATELGELATSIQSIARKAHMETNLEMEI 167
Query: 68 IGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + I + + F +L +A + + I I HTD++
Sbjct: 168 VPQGLRVLIKDDKNRNMFERGSARIMPFFQSLLTELAPVFDSL-DNKIIITGHTDAMAYK 226
Query: 124 K---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
NN +S +RA + L Q G+ ++ + V A + +D + + N+RIEI
Sbjct: 227 SDIYNNWNLSGDRALSARRVLEQAGMPEDKVMQVSAMADQMLLDAKNPES--AGNRRIEI 284
Query: 181 QIFPR 185
+ +
Sbjct: 285 MVLTK 289
>gi|117622532|ref|YP_851445.1| hypothetical protein APECO1_1739 [Escherichia coli APEC O1]
gi|237707752|ref|ZP_04538233.1| MbhA protein [Escherichia sp. 3_2_53FAA]
gi|115511656|gb|ABI99730.1| putative motility protein MbhA [Escherichia coli APEC O1]
gi|226898962|gb|EEH85221.1| MbhA protein [Escherichia sp. 3_2_53FAA]
gi|323958690|gb|EGB54391.1| OmpA family protein [Escherichia coli H263]
Length = 261
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A +L+
Sbjct: 96 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVLDSL-DNK 149
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ N+ + V A + +D +
Sbjct: 150 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMADQMLLDAKN 209
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 210 PQS--AGNRRIEIMVLTK 225
>gi|332830269|gb|EGK02897.1| hypothetical protein HMPREF9455_01147 [Dysgonomonas gadei ATCC
BAA-286]
Length = 383
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 46/143 (32%), Gaps = 10/143 (6%)
Query: 42 RFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+ L + E ++ V + ++K + A
Sbjct: 247 QENDRLRNQKPEVVEKIVTKDCPKCPETKGSFVS-NVVFFRLGSANIDKNQEVSIFNTAK 305
Query: 102 ILNKFPSTVIAIQSHTDSI-GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
L PS + + + D GT N +S++RA + + LI++ + ++V
Sbjct: 306 YLQDNPSAKVKVVGYADKKTGTPSINEKLSEKRAKNVANELIKKYNIDSNRVTVEWKGDT 365
Query: 161 -YPIDTNDTKVGRQNNQRIEIQI 182
P N N R+ I +
Sbjct: 366 VQPYAEN------AWN-RVAIFV 381
>gi|325954512|ref|YP_004238172.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323437130|gb|ADX67594.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 436
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 55/139 (39%), Gaps = 6/139 (4%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPM---LQLIATIL 103
D E+ + V D++ I + + +++ + ++ ++ L
Sbjct: 298 DDIEEYIKNNQGSNTTTVLADSDLLEQLINSGIINVYFDYNVDQPYEASVGGIKFVSEYL 357
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ P+ + + + D +G+ N +SQ RA+ +K ++ + ++ ++V
Sbjct: 358 KRNPNVQMDVIGYADPVGSDGFNKNLSQRRAENVKR-ILVQQGANANNLNVVAMGEDKSF 416
Query: 164 DTNDTKVGRQNNQRIEIQI 182
N T Q +R+ +I
Sbjct: 417 -QNSTVSAHQLARRVIFKI 434
>gi|300309835|ref|YP_003773927.1| outer membrane protein peptidoglycan-associated (lipo)protein
[Herbaspirillum seropedicae SmR1]
gi|300072620|gb|ADJ62019.1| outer membrane protein peptidoglycan-associated (lipo)protein
[Herbaspirillum seropedicae SmR1]
Length = 232
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 66/206 (32%), Gaps = 30/206 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
GL M M + L + + +++ +T L + EF L+
Sbjct: 19 TGLMMVFMLLTAAFMLRVEQTTTLVVNEFEETKSDM------LQALQKEFSRDLKQWNAE 72
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ----LIATILNKFPST----VIAIQSH 116
+ I P + L KF +L+ T+L I I+ H
Sbjct: 73 L-LGDMTIRFNDPTVLFATGSAELRPKFKQILRDFFPRYVTMLTSDKYRDAIKEIRIEGH 131
Query: 117 TDSIGT--------LKNNLLISQERADVIKSYLIQRGVSSNRF------ISVRGFAYKYP 162
T T N+ +SQ R +L++ + ++ G + P
Sbjct: 132 TSRSWTNSTDTKTAYFLNMELSQARTRSALEFLLRLPAVERQQDWLVGHVTANGLSSSKP 191
Query: 163 IDTNDTKVGRQN-NQRIEIQIFPRGN 187
I +D Q NQR+E +I +
Sbjct: 192 ISPDDNSAAAQLANQRVEFRIVTNAS 217
>gi|254457405|ref|ZP_05070833.1| OmpA family protein [Campylobacterales bacterium GD 1]
gi|207086197|gb|EDZ63481.1| OmpA family protein [Campylobacterales bacterium GD 1]
Length = 252
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 65/186 (34%), Gaps = 19/186 (10%)
Query: 4 ELGLSMF-------IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+ + + + +G G +K F+ ++ D + S D F
Sbjct: 78 KSFIVLLKGQKENSSIVVATGAGNVVVDKPNQFVSITSKDDTPTEPKDMSKDDLNALFSD 137
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + I + + + + L + LQ + +++ + I H
Sbjct: 138 VISE-----------IPEKQLSYTLYFNGIKLTDESKISLQTMIDEVSQRDKPYMQIIGH 186
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TD+ G + N ++ +RA + I+ S I V ++ + + Q N+
Sbjct: 187 TDTAGPSEKNKILGLKRAKAVYEM-IKNSDISYSKIDVDSYSESNLAIKTEDETVEQLNR 245
Query: 177 RIEIQI 182
R+EI +
Sbjct: 246 RVEIFV 251
>gi|91209318|ref|YP_539304.1| hypothetical protein UTI89_C0270 [Escherichia coli UTI89]
gi|91070892|gb|ABE05773.1| putative motility protein MbhA [Escherichia coli UTI89]
Length = 262
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A +L+
Sbjct: 97 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVLDSL-DNK 150
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ N+ + V A + +D +
Sbjct: 151 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMADQMLLDAKN 210
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 211 PQS--AGNRRIEIMVLTK 226
>gi|302384369|ref|YP_003820192.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194997|gb|ADL02569.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 385
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 1/103 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V L + ++ AT T + + + D+ G+ N+ +S RA +
Sbjct: 280 VVYFDWDRSDLTAEARSVVTQAATYAKSGRPTRVLVVGYADTSGSAAYNVGLSNRRARTV 339
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
L+ + I++ G V N+R I
Sbjct: 340 ADALVSN-GVNGGVIALDGKGETNLARPTADGVREPLNRRATI 381
>gi|296157481|ref|ZP_06840316.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295892253|gb|EFG72036.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 335
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 56/146 (38%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + G I + ++ +E +L+ I LN
Sbjct: 147 EANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATAKDQVEPYMRDILREIGHTLNDV 206
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD+ +N +S +RA+ + LI G+ + + V G A
Sbjct: 207 PN-RIIVQGHTDAAQYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVMRVLGLASTQ 265
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + + +
Sbjct: 266 NL--NKADPMDPENRRISIIVLNKKS 289
>gi|148549819|ref|YP_001269921.1| hypothetical protein Pput_4617 [Pseudomonas putida F1]
gi|148513877|gb|ABQ80737.1| hypothetical protein Pput_4617 [Pseudomonas putida F1]
Length = 247
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/190 (12%), Positives = 63/190 (33%), Gaps = 21/190 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+ +F++ ++ ++ + L + + IVV
Sbjct: 31 MMILFLVVMVAALSSV-TQRINQAEQGEKQRSKDISQICEHLS-----LKAKTASKTIVV 84
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV--------IAIQSHT 117
+ I+ ++ L LQ + ++ ++ + I+ T
Sbjct: 85 DCKDNRISFG-DAGRFGHNQYALSNDGQSALQEVVPMILDAANSEEGRKWFKQVVIEGST 143
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVS------SNRFISVRGFAYKYPIDTNDTKVG 171
D+ G+ NL +S +R++ + L+ +R + N+ K
Sbjct: 144 DTDGSYLYNLHLSLQRSEWVMCSLLDSRSPLQVGLSPEHQQQIRSMFLAGGVSFNNAKDT 203
Query: 172 RQNNQRIEIQ 181
++ ++R+E++
Sbjct: 204 KEESRRVELR 213
>gi|300694372|ref|YP_003750345.1| chemotaxis protein motb (motility protein b), flagellar motor
protein [Ralstonia solanacearum PSI07]
gi|299076409|emb|CBJ35725.1| Chemotaxis protein motB (Motility protein B), flagellar motor
protein [Ralstonia solanacearum PSI07]
Length = 314
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 63/175 (36%), Gaps = 11/175 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE--DEFQMQLQDTGIVVSRIGDMITCYI 76
+ +++ + +D +NK ++ E I ++ G I
Sbjct: 100 SPSPTVQRQRNVRDESDDAALNKLKQHIMEMIESNPVMNQFKHQLLIDMTSEGLRIQIVD 159
Query: 77 PVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLIS 130
+ + + ++ +L+ + LN P+ I++ HTD+ N +S
Sbjct: 160 QQNRPMFANASAEVQPYMRTILRELGAALNDVPN-PISLSGHTDATQYATQNGYSNWELS 218
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+RA+ + LI G+ + V G P+D T N+RI I +
Sbjct: 219 ADRANASRRELIAGGMKPEKVARVVGLEASVPLD--KTDAFNPINRRISIVVLNN 271
>gi|256380952|ref|YP_003104612.1| OmpA/MotB domain protein [Actinosynnema mirum DSM 43827]
gi|255925255|gb|ACU40766.1| OmpA/MotB domain protein [Actinosynnema mirum DSM 43827]
Length = 407
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 56/177 (31%), Gaps = 11/177 (6%)
Query: 16 SGCG---LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
SGC A ++ V + + E + D +R +
Sbjct: 227 SGCDLDVTAGERREPVSQVRVPAVPVEGGLPDERPQDGGGEAGGEDADRQDDSARSATEV 286
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ L L+ IA P T + HT G + L +S+
Sbjct: 287 VTLPNALLFQPDSDVLMPAASAALERIARRFG--PGTTARVTGHTAHRGAAQGALALSER 344
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR------QNNQRIEIQIF 183
RA + L+ GV S SVRG Y P+ G+ + N+ + +++
Sbjct: 345 RARRVAGALVSLGVPSEALTSVRGVGYAEPVRPEVDATGQPVPGAAEQNRAVVVELT 401
>gi|167950653|ref|ZP_02537727.1| OmpA domain protein [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 62
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ N +S RA + + + + +S GF + PI N++ G+ N+R E+
Sbjct: 1 MREYNKDLSHRRAITVM-HYLSDNGVAAERLSAEGFGEEQPISDNESLEGQTMNRRAELI 59
>gi|256830501|ref|YP_003159229.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256579677|gb|ACU90813.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 260
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/211 (13%), Positives = 59/211 (27%), Gaps = 35/211 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL------ 58
+ F + +S L K+KV + + T + L + Q+
Sbjct: 9 TLMMTFFIVLVSMASLTDIYKRKVAIGSVSGTFGTGAPSMNDLTTVDTRTQVDPGPINVF 68
Query: 59 -----------QDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILN 104
+D + + + + L +L + ++
Sbjct: 69 KDLSPVRDHLWEDPDKDLRFESNRFMQRLSIGADALFAPGSADLTAGGRSLLDRLRPVVM 128
Query: 105 KFPSTVIAIQSHTDSIGTL-------------KNNLLISQERADVIKSYLIQRGVSSNRF 151
+ S + + HT + +S R + Y I+
Sbjct: 129 E-SSHPLGLSGHTSEGMDEFGPDYLAKPWIKVDFSWELSLARVMAVYKYFIE-TGVEPEK 186
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + F P T + RQ N+R+EI +
Sbjct: 187 LRLEAFGRFRPRLTTEAPGERQTNRRVEITL 217
>gi|58039713|ref|YP_191677.1| Outer membrane protein [Gluconobacter oxydans 621H]
gi|58002127|gb|AAW61021.1| Outer membrane protein [Gluconobacter oxydans 621H]
Length = 370
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 7/108 (6%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH------TDSIGTLKNNLLISQE 132
L + ++ A T I + + N+ +SQ
Sbjct: 261 VFFDWDSAELSTRAKAVVAAAARNSTSVQVTHIEVSGYTDTSAAHPGHRGEAYNMALSQR 320
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
RA+ +K L+ R + I+ +GF +P+ N+R+EI
Sbjct: 321 RANTVKEELV-RDGVAAGLITTQGFGESHPLVVTAANTREPQNRRVEI 367
>gi|294491414|gb|ADE90170.1| putative chemotaxis protein [Escherichia coli IHE3034]
gi|307628268|gb|ADN72572.1| hypothetical protein UM146_16065 [Escherichia coli UM146]
gi|323953128|gb|EGB48996.1| OmpA family protein [Escherichia coli H252]
Length = 256
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A +L+
Sbjct: 91 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVLDSL-DNK 144
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ N+ + V A + +D +
Sbjct: 145 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMADQMLLDAKN 204
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 205 PQS--AGNRRIEIMVLTK 220
>gi|54307286|ref|YP_128306.1| chemotaxis LafU protein [Photobacterium profundum SS9]
gi|46911706|emb|CAG18504.1| Hypothetical chemotaxis LafU protein [Photobacterium profundum SS9]
Length = 330
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 10/146 (6%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATIL 103
++ + IV+ + + I + + + F ML +A +L
Sbjct: 146 KGLKEMAEALSASNNIVLEIVPQGLRILIQDDDDHFMFQRGGIEMTPFFEDMLYNLAPVL 205
Query: 104 NKFPSTVIAIQSHTDSIGT---LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ + ++ I HTDSI +N +S RA + L+ G+ + V A +
Sbjct: 206 GQIKNRMV-ISGHTDSIPFHRRDYSNWDLSGSRALKARQVLVDSGLPVANILQVAAMAAR 264
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFPRG 186
P++ K G N+RIE+ + +
Sbjct: 265 MPVNKQYPKSG--KNRRIEMMVLTKN 288
>gi|240949813|ref|ZP_04754142.1| major outer membrane protein [Actinobacillus minor NM305]
gi|240295730|gb|EER46425.1| major outer membrane protein [Actinobacillus minor NM305]
Length = 372
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L +N + I + + D IG NL +SQ RA
Sbjct: 249 SDVLFAFGKSSLKPAAAQALDAANNEINALGLANPAIQVNGYADRIGKQAANLKLSQRRA 308
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +YL+ + + ++ G+ P+ N GR ++R+E+Q+
Sbjct: 309 ETVANYLVSK-GQNAANVTAVGYGSANPVTGNTCDAVKGRKALIACLAPDRRVEVQV 364
>gi|329117903|ref|ZP_08246617.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327465984|gb|EGF12255.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 172
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 50/166 (30%), Gaps = 11/166 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVF-LHKSNDTDIVNKRFGSSLDKAEDE---FQM 56
M K + ++ ++ C + + + + LD+ E
Sbjct: 1 MAKTILTAVLSGCLMAACTSTPPPEPPLARRTEIVVLKRTGYSDAAILDEEEGSYFWLPQ 60
Query: 57 QLQDTGIVVS-RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ GI +S + + L LQ A +L + + +
Sbjct: 61 AVSPAGIALSFQTASGEHKVLHTVYFRTDSAVLSAHEKQALQRAAPMLRQQG---VTLSG 117
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ D ++ N ++ RA+ + YL GV NR F
Sbjct: 118 YADPRAGVEYNNRLAARRAESVARYLDGLGVRVNRRCI---FGETR 160
>gi|163803843|ref|ZP_02197691.1| hypothetical protein 1103602000585_AND4_16519 [Vibrio sp. AND4]
gi|159172348|gb|EDP57227.1| hypothetical protein AND4_16519 [Vibrio sp. AND4]
Length = 157
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/153 (9%), Positives = 42/153 (27%), Gaps = 9/153 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + S+ + ++GC +K+ + + +A +
Sbjct: 1 MKKTILASLVCVVALAGC-----NQKEETVAPTQSQPEETAAATQPQPEATVAATQSQPE 55
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV----IAIQSH 116
T + ++ C S+ + K L + +N + Q
Sbjct: 56 TTVAATQPEANPICSAANLTGGWSQAEVTPKAQQALDFVLGQMNTSAKLKQILSVRTQVV 115
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ ++ + + ++ L +
Sbjct: 116 SGINYAIEFEMDNGEVWNTIVYRSLNDEMKITQ 148
>gi|116694193|ref|YP_728404.1| flagellar motor protein MotB [Ralstonia eutropha H16]
gi|113528692|emb|CAJ95039.1| Chemotaxis protein [Ralstonia eutropha H16]
Length = 321
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 59/170 (34%), Gaps = 10/170 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITC--YIPVH 79
++++ + K+ + + + + ++ G I
Sbjct: 106 PSDEQRRNEQQEAQRLRALKQRLEQIIENNPVLRQFRPQLLLDITSEGLRIQILDTQNRP 165
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE-----RA 134
+ +E +L+ I +LN+ P+ +++ HTD+ S RA
Sbjct: 166 MFRTGSATVETYMRTILREIGPVLNELPN-KVSLSGHTDAANYSNGERTYSNWELSGDRA 224
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+ + LI G+ + + V G A P+D D N+RI I +
Sbjct: 225 NASRRELIAGGMQEGKVLRVLGLAATMPLDKEDLLA--PVNRRISIVVLN 272
>gi|78485775|ref|YP_391700.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78364061|gb|ABB42026.1| Flagellar motor protein MotB [Thiomicrospira crunogena XCL-2]
Length = 296
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 19/170 (11%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV--------VSRIGDMITCYIPVHV---S 81
N+ + + ++ + + + ++ + I + + + +
Sbjct: 101 ENEDGEAKAQEKAQMEDLKRQIEQKISENPITNELKNQLKIEVTPNGLQVQVLDDRKRPM 160
Query: 82 FVSEVFLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLISQERADV 136
F S V L K +L+ + ++L + + I+I HTDS G N N +S +RA+
Sbjct: 161 FGSGVDLPKDYAAKLLKEVGSVLAQTNN-RISIAGHTDSSGYHSNAEYTNWELSADRANA 219
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ L+ GV + V G + P D + R N+RI I + +
Sbjct: 220 ARRLLLDGGVGEKKIAQVVGLSDTVPFDKENPYNPR--NRRISIIVLNKE 267
>gi|319903022|ref|YP_004162750.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
gi|319418053|gb|ADV45164.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
Length = 411
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ P+ + V++E L I +L K P T I I D+ G+
Sbjct: 299 DPTERTSSIKFPIISFSFNSVWIEPSQRTKLHEIKLLLEKNPQTTITISGWCDNKGSEDV 358
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N IS +RAD +K +L++RG+S+ R I+ G ID T V + +R EI+
Sbjct: 359 NKRISAKRADAVKLWLVRRGISTERIIT-EGCG----IDRQQTDVDKV--RRAEIK 407
>gi|302381877|ref|YP_003817700.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302192505|gb|ADL00077.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 382
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 1/103 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V L + ++ AT T + + + D+ G+ N+ +S RA +
Sbjct: 277 VVYFDWDRSDLTAEARSVVTQAATYAKSGRPTRVLVVGYADTSGSAAYNVGLSNRRARTV 336
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
L+ + I++ G V N+R I
Sbjct: 337 ADALVSN-GVNGGVIALDGKGETNLARPTADGVREPLNRRATI 378
>gi|186682639|ref|YP_001865835.1| OmpA/MotB domain-containing protein [Nostoc punctiforme PCC 73102]
gi|186465091|gb|ACC80892.1| OmpA/MotB domain protein [Nostoc punctiforme PCC 73102]
Length = 657
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 7/106 (6%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-NNLLISQERADVIK 138
L + L +FP + + D G +NL +S RA +
Sbjct: 533 YFDFDSDQLSSSETGKIDTFLDYLRRFPDVKVTPEGFADRRGGASGHNLDLSLRRAQAVG 592
Query: 139 SYLIQRGVSSNRFISV-RGFAYKY---PIDTN--DTKVGRQNNQRI 178
+ L +GV+ + +V G P T DT+ R+ N+R+
Sbjct: 593 AALRAKGVAEAQISAVTIGSGSTEDFTPDATTNQDTEANRRGNRRV 638
>gi|82702437|ref|YP_412003.1| flagellar motor protein MotB [Nitrosospira multiformis ATCC 25196]
gi|82410502|gb|ABB74611.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
Length = 308
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 61/144 (42%), Gaps = 13/144 (9%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + + + + G+ + I D + ++ LE +LQ + ++LN+
Sbjct: 141 MHEFRKQLLLDITTEGLRIQIIDDK-----NRPMFALARAELEPHTREILQKLGSVLNEM 195
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ +++ HTDS +N +S +RA+ + LI G++ + + V G +
Sbjct: 196 PN-KLSLSGHTDSTPYASGEKNYSNWELSADRANASRRELILGGMNEQKIMRVVGLSSAV 254
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPR 185
D ND N+RI I +
Sbjct: 255 LFDRNDP--TNPVNRRISIIVMSN 276
>gi|84385694|ref|ZP_00988725.1| hypothetical protein V12B01_26209 [Vibrio splendidus 12B01]
gi|84379674|gb|EAP96526.1| hypothetical protein V12B01_26209 [Vibrio splendidus 12B01]
Length = 187
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 63/190 (33%), Gaps = 12/190 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + + FI++ + + ++ TD V + L E + +Q+
Sbjct: 1 MKKIIPILFFIVSGNTAANCVNYTEEYTISRTLTGTDTVITQVSGVLSVEVSEKKNIVQN 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFL---EKKFLPMLQLIATILNKF-----PSTVIA 112
+ D I S L + + + ++ I
Sbjct: 61 KKV---IKTDAINVTDACVFDQESMSLLLNYKTDKHSLTDKHKQAIAQYLELVDQDKKIV 117
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
I+ HTD IG+ N +SQ R YL + NR I + F PI +
Sbjct: 118 IEGHTDDIGSKAYNKKLSQRRTSSATVYLKKNLGLGNRIIE-KAFGESSPICKVEENAAS 176
Query: 173 QNNQRIEIQI 182
N+R+ + I
Sbjct: 177 GCNRRVILTI 186
>gi|162450138|ref|YP_001612505.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161160720|emb|CAN92025.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 222
Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 66/174 (37%), Gaps = 12/174 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM---QLQDTGIVVSRIGDMITCY 75
A +++ + + + S D+ ++ ++ I ++
Sbjct: 34 SGAVLAEEEKPFGGAAAGSPLAVTWSPSSDEPVARIEVYGHDTAGYWAGIAIIPWNVSIP 93
Query: 76 IPVHVSFVSEVFLE----KKFLPMLQLIATILNKFPS---TVIAIQSHTDSIGTLKNNLL 128
+ + K LQ I+ ++ K + I HTD++G+ ++NL
Sbjct: 94 HEEVQFETNSDVIRAPEVPKLEASLQKISEVVAKTSELGKITLFIVGHTDTVGSAEHNLA 153
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S++RA I ++ RGV + I+ G P+ +V N+R++ +
Sbjct: 154 LSRKRARAIAAWFKGRGVKLS--IAFEGLGESAPLVKTADQVDEPRNRRVDYIL 205
>gi|301643541|ref|ZP_07243583.1| OmpA family protein [Escherichia coli MS 146-1]
gi|307136895|ref|ZP_07496251.1| hypothetical protein EcolH7_02026 [Escherichia coli H736]
gi|301078041|gb|EFK92847.1| OmpA family protein [Escherichia coli MS 146-1]
gi|315616807|gb|EFU97424.1| lateral flagellar motor protein B [Escherichia coli 3431]
Length = 307
Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 142 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 195
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D+ +
Sbjct: 196 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKN 255
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 256 PQS--AGNRRIEIMVLTK 271
>gi|300697987|ref|YP_003748648.1| Chemotaxis protein motB (Motility protein B), flagellar motor
protein [Ralstonia solanacearum CFBP2957]
gi|299074711|emb|CBJ54269.1| Chemotaxis protein motB (Motility protein B), flagellar motor
protein [Ralstonia solanacearum CFBP2957]
Length = 314
Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 55/143 (38%), Gaps = 12/143 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + + + G+ + + + + ++ +L+ + LN
Sbjct: 137 MNQFKHQLLIDMTSEGLRIQIVDQQ-----NRPMFGNASAEVQPYMRTILRELGAALNDV 191
Query: 107 PSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I++ HTD+ N +S +RA+ + LI G+ + V G P
Sbjct: 192 PN-PISLSGHTDATQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVP 250
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
+D T N+RI I +
Sbjct: 251 LD--KTDAFNPINRRISIVVLNN 271
>gi|260853484|ref|YP_003227375.1| putative lateral flagellar motor protein [Escherichia coli O26:H11
str. 11368]
gi|260866430|ref|YP_003232832.1| putative lateral flagellar motor protein [Escherichia coli O111:H-
str. 11128]
gi|257752133|dbj|BAI23635.1| predicted lateral flagellar motor protein [Escherichia coli O26:H11
str. 11368]
gi|257762786|dbj|BAI34281.1| predicted lateral flagellar motor protein [Escherichia coli O111:H-
str. 11128]
gi|323158085|gb|EFZ44184.1| lateral flagellar motor protein B [Escherichia coli EPECa14]
gi|323178474|gb|EFZ64052.1| lateral flagellar motor protein B [Escherichia coli 1180]
Length = 307
Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 142 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 195
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D+ +
Sbjct: 196 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKN 255
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 256 PQS--AGNRRIEIMVLTK 271
>gi|218509333|ref|ZP_03507211.1| flagellar motor protein MotB [Rhizobium etli Brasil 5]
Length = 228
Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 61/173 (35%), Gaps = 12/173 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ--DTGIVVSRIGDMITCYI 76
+ + +K + +T+ K + + G+ V+ + I
Sbjct: 56 AEKNADHQKDADKSAAETERQKKEADELQQQIAQQIGGVAGKLAEGLTVTASEGGLLVSI 115
Query: 77 ----PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT---DSIGTLKNNLLI 129
+ + ++ + ++ I TIL + +A++ HT G N +
Sbjct: 116 SDQNDDSMFNIGSAVPRQEMVLAMERIGTILKERGGA-VAVRGHTDGRQYKGGQNENWRL 174
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
S +RA L++ G+ R V GFA + D N+RIEI +
Sbjct: 175 SMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLPADPF--NAANRRIEILV 225
>gi|118594345|ref|ZP_01551692.1| outer membrane protein, porin-associated lipoprotein
[Methylophilales bacterium HTCC2181]
gi|118440123|gb|EAV46750.1| outer membrane protein, porin-associated lipoprotein
[Methylophilales bacterium HTCC2181]
Length = 179
Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 50/170 (29%), Gaps = 16/170 (9%)
Query: 16 SGCGLASREKK---KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
+GC + + D + + D
Sbjct: 16 AGCSTTDINDPMGLNAPFPELESRTGDGSEVDLIGSSQGKKLNQSALDELAAAAELADR- 74
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
++ F ++ AT +NK + + + D G+ + NL + Q+
Sbjct: 75 -----SVYFDYDSFAIKSDFEGVISNHATFINKH-DAAVVVYGNADYRGSHEYNLALGQK 128
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ--NNQRIEI 180
RA +K ++ + I F ++ N T G ++R +I
Sbjct: 129 RAVAVKQ-ALEALGVNGSAIETISFGEEH---ANQTCTGSTCGQDRRADI 174
>gi|148260894|ref|YP_001235021.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|146402575|gb|ABQ31102.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
Length = 371
Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 57/158 (36%), Gaps = 14/158 (8%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPML 96
+ + + + + V+ G I + + L +L
Sbjct: 209 TAGSEIRQMMAQDPDLASLSKQVSVHVTPRGLRIQIMDAHKRPMFALGSARPNPMTLELL 268
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGT---LKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
IA IL++ I I +TD+ K+N +S ERA+ ++ + R I+
Sbjct: 269 TKIAPILSRLGD-RIRIAGYTDARPYVAGPKDNWDLSVERAN-ATRAVLVKAGFPKRLIA 326
Query: 154 -VRGFAYKYPIDTNDTKVGRQNNQRIEIQI----FPRG 186
V G+A + + ++ N+R+ I + P G
Sbjct: 327 RVSGYADRKLLIPSNPLA--AANRRVGILVVRPALPEG 362
>gi|295678083|ref|YP_003606607.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295437926|gb|ADG17096.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 336
Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + G I + + +E +L+ I LN
Sbjct: 148 EANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATARDVVEPYMRDILREIGHTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + L+ G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELVAGGMDEAKVMRVLGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + + +
Sbjct: 267 NL--NKADPLDPENRRISIIVLNKKS 290
>gi|238025855|ref|YP_002910086.1| flagellar motor protein MotB [Burkholderia glumae BGR1]
gi|124695899|gb|ABN14293.1| MotB [Burkholderia glumae BGR1]
gi|124695929|gb|ABN14297.1| MotB [Burkholderia glumae BGR1]
gi|237875049|gb|ACR27382.1| MotB [Burkholderia glumae BGR1]
Length = 349
Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 10/143 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + G I + + +E +L+ I LN+
Sbjct: 148 EANPVLRQFKQQIRIDSTLSGLRIEIVDTQKRPMFATASNMVEPYMRDILREIGKTLNEV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIVVQGHTDAVPYAGGEKGYSNWELSADRANASRRELISGGMDDAKVLRVTGLASTQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFP 184
+ N N+RI I +
Sbjct: 267 NL--NKADPFDPENRRISILVLN 287
>gi|323963541|gb|EGB59099.1| OmpA family protein [Escherichia coli H489]
gi|323972411|gb|EGB67618.1| OmpA family protein [Escherichia coli TA007]
Length = 261
Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+KK T I + + E +M++ G+ V D ++
Sbjct: 72 KKKSATELGELATSITTIARDAHM---EANLEMEIVPQGLRVLIKDDQ-----NRNMFER 123
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSY 140
+ F +L +A + + I I HTD++ N N +S +RA +
Sbjct: 124 GSAQIMPFFKTLLVELAPVFDSL-DNKIIITGHTDAMAYKNNIYDNWNLSGDRALSARRV 182
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L + G+ ++ + V A + +D+ + + N+RIEI + +
Sbjct: 183 LEEAGMPEDKVMQVSAMADQMLLDSKNPQS--AGNRRIEIMVLTK 225
>gi|326404291|ref|YP_004284373.1| chemotaxis protein MotB [Acidiphilium multivorum AIU301]
gi|325051153|dbj|BAJ81491.1| chemotaxis protein MotB [Acidiphilium multivorum AIU301]
Length = 371
Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 57/158 (36%), Gaps = 14/158 (8%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPML 96
+ + + + + V+ G I + + L +L
Sbjct: 209 TAGSEIRQMMAQDPDLASLSKQVSVHVTPRGLRIQIMDAHKRPMFALGSARPNPMTLELL 268
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGT---LKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
IA IL++ I I +TD+ K+N +S ERA+ ++ + R I+
Sbjct: 269 TKIAPILSRLGD-RIRIAGYTDARPYVAGPKDNWDLSVERAN-ATRAVLVKAGFPKRLIA 326
Query: 154 -VRGFAYKYPIDTNDTKVGRQNNQRIEIQI----FPRG 186
V G+A + + ++ N+R+ I + P G
Sbjct: 327 RVSGYADRKLLIPSNPLA--AANRRVGILVVRPALPEG 362
>gi|74310872|ref|YP_309292.1| hypothetical protein SSON_0272 [Shigella sonnei Ss046]
gi|293418347|ref|ZP_06660782.1| chemotaxis protein MotB [Escherichia coli B088]
gi|73854349|gb|AAZ87056.1| putative motility protein [Shigella sonnei Ss046]
gi|291324875|gb|EFE64290.1| chemotaxis protein MotB [Escherichia coli B088]
Length = 261
Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+KK T I + + E +M++ G+ V D ++
Sbjct: 72 KKKSATELGELATSITTIARDAHM---EANLEMEIVPQGLRVLIKDDQ-----NRNMFER 123
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSY 140
+ F +L +A + + I I HTD++ N N +S +RA +
Sbjct: 124 GSAQIMPFFKTLLVELAPVFDSL-DNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRV 182
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L + G+ ++ + V A + +D+ + + N+RIEI + +
Sbjct: 183 LEEAGMPEDKVMQVSAMADQMLLDSKNPQS--AGNRRIEIMVLTK 225
>gi|323139665|ref|ZP_08074707.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
gi|322395097|gb|EFX97656.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
Length = 351
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 62/174 (35%), Gaps = 14/174 (8%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI----VVSRIGDMITCY 75
++ + + + + + E + + V + + +
Sbjct: 176 SPKKDSHAPSVTPAEQGEKAKASAAALQAELEKIVNQEARGAHAAPKTEVKQADEGVLIT 235
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT---LKNNLL 128
+ + V + + + + ++ I +L K + I ++ HTD +N
Sbjct: 236 LTDDANFSMFEVGSIEPKPQLVRIIGQIGKVLAK-KTGEIEVRGHTDGRSYTSKSYDNWR 294
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S +RA V+ LI+ G+ R + G A ++ D N+RIEI +
Sbjct: 295 LSSDRATVVNYMLIRGGLPPARVGKIVGMADRHLKTPKDPLA--PVNRRIEILL 346
>gi|291617784|ref|YP_003520526.1| MotB [Pantoea ananatis LMG 20103]
gi|291152814|gb|ADD77398.1| MotB [Pantoea ananatis LMG 20103]
gi|327394202|dbj|BAK11624.1| chemotaxis protein MotB [Pantoea ananatis AJ13355]
Length = 424
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 8/119 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-----KN 125
I + +E +L+ IA +LN P+ I+I HTD I +
Sbjct: 151 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNDIPN-RISIAGHTDDIQYAGGDKGYS 209
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
N +S +RA+ + L+ G+ + + + G A + N+RI + +
Sbjct: 210 NWELSADRANASRRELVIGGLDGGKILRIVGMADTMKLKNRGGDD--AVNRRISLLVLN 266
>gi|209515722|ref|ZP_03264585.1| OmpA/MotB domain protein [Burkholderia sp. H160]
gi|209503749|gb|EEA03742.1| OmpA/MotB domain protein [Burkholderia sp. H160]
Length = 336
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + G I + + +E +L+ I LN
Sbjct: 148 EANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATARDVVEPYMRDILREIGHTLNDV 207
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 208 PN-RIIVQGHTDAVPYAGGDKGYSNWELSADRANASRRELIAGGMDEAKVMRVLGLASAQ 266
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + R +
Sbjct: 267 NL--NKADPLDPENRRISIIVLNRKS 290
>gi|194438259|ref|ZP_03070351.1| putative chemotaxis protein [Escherichia coli 101-1]
gi|297521341|ref|ZP_06939727.1| hypothetical protein EcolOP_27134 [Escherichia coli OP50]
gi|194422923|gb|EDX38918.1| putative chemotaxis protein [Escherichia coli 101-1]
Length = 256
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+KK T I + + E +M++ G+ V D ++
Sbjct: 67 KKKSATELGELATSITTIARDAHM---EANLEMEIVPQGLRVLIKDDQ-----NRNMFER 118
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSY 140
+ F +L +A + + I I HTD++ N N +S +RA +
Sbjct: 119 GSAQIMPFFKTLLVELAPVFDSL-DNKIIITGHTDAMAYKNNIYDNWNLSGDRALSARRV 177
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L + G+ ++ + V A + +D+ + + N+RIEI + +
Sbjct: 178 LEEAGMPEDKVMQVSAMADQMLLDSKNPQS--AGNRRIEIMVLTK 220
>gi|157157459|ref|YP_001461420.1| hypothetical protein EcE24377A_0264 [Escherichia coli E24377A]
gi|157159714|ref|YP_001457032.1| hypothetical protein EcHS_A0258 [Escherichia coli HS]
gi|191165724|ref|ZP_03027563.1| putative chemotaxis protein [Escherichia coli B7A]
gi|157065394|gb|ABV04649.1| putative chemotaxis protein [Escherichia coli HS]
gi|157079489|gb|ABV19197.1| putative chemotaxis protein [Escherichia coli E24377A]
gi|190904231|gb|EDV63941.1| putative chemotaxis protein [Escherichia coli B7A]
gi|320176694|gb|EFW51731.1| Flagellar motor rotation protein MotB [Shigella dysenteriae CDC
74-1112]
gi|323169560|gb|EFZ55232.1| lateral flagellar motor protein B [Shigella sonnei 53G]
Length = 256
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+KK T I + + E +M++ G+ V D ++
Sbjct: 67 KKKSATELGELATSITTIARDAHM---EANLEMEIVPQGLRVLIKDDQ-----NRNMFER 118
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSY 140
+ F +L +A + + I I HTD++ N N +S +RA +
Sbjct: 119 GSAQIMPFFKTLLVELAPVFDSL-DNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRV 177
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L + G+ ++ + V A + +D+ + + N+RIEI + +
Sbjct: 178 LEEAGMPEDKVMQVSAMADQMLLDSKNPQS--AGNRRIEIMVLTK 220
>gi|194427556|ref|ZP_03060104.1| putative chemotaxis protein [Escherichia coli B171]
gi|194414326|gb|EDX30600.1| putative chemotaxis protein [Escherichia coli B171]
Length = 256
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 63/165 (38%), Gaps = 14/165 (8%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+KK T I + + E +M++ G+ V D ++
Sbjct: 67 KKKSATELGELATSITTIARDAHM---EANLEMEIVPQGLRVLIKDDQ-----NRNMFER 118
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSY 140
+ F L +A + + I I HTD++ N N +S +RA +
Sbjct: 119 GSAQIMPFFKTQLVELAPVFDSL-DNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRV 177
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L + G+ ++ + V A + +D+ + K N+RIEI + +
Sbjct: 178 LEEAGMPEDKVMQVSAMADQMLLDSKNPKS--AGNRRIEIMVLTK 220
>gi|114800514|ref|YP_760698.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
gi|114740688|gb|ABI78813.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
Length = 387
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 4/109 (3%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPST---VIAIQSHTDSIGTLKNNLLISQERA 134
V + + ++ + + I HTD+ G N +S RA
Sbjct: 278 VVYFEWDRSDVTSQAAAVIDQAVANIRSVEGCAAGSVTIVGHTDTSGNPDYNQRLSVRRA 337
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
DV+ + + +N I+ G V N+R E+ I
Sbjct: 338 DVVAA-ALSERGIANTLITQDGKGETALAKATQDGVREPLNRRSEVTII 385
>gi|288962863|ref|YP_003453157.1| outer membrane protein [Azospirillum sp. B510]
gi|288915129|dbj|BAI76613.1| outer membrane protein [Azospirillum sp. B510]
Length = 347
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + ++ A + + I + HTD+ G+ N +S RA+ +
Sbjct: 241 QVFFDWDKSAITPNSDKIIADAAEAAGRARAVRIQVIGHTDTSGSPSYNQKLSLRRAEAV 300
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + IS+ G + V +N+R +I I
Sbjct: 301 -RKALVGHGTPANIISIEGVGENQLMVPTGPNVREPSNRRAQIMI 344
>gi|171059943|ref|YP_001792292.1| outer membrane protein [Leptothrix cholodnii SP-6]
gi|170777388|gb|ACB35527.1| outer membrane protein [Leptothrix cholodnii SP-6]
Length = 155
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 58/151 (38%), Gaps = 21/151 (13%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS----- 66
+ ++GC +F ++ L + + E + +L+ T + +S
Sbjct: 3 LVALAGCAATGPAPPALFEPRALS-----------LAELDAELRRELKGTPVQISATAAS 51
Query: 67 RIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ +P H + ++ +L + L P ++ + + D ++
Sbjct: 52 SESPALLIGVPQPHGFELGSAAVKPALAAVLDRLVAALKGNPRWLVQVSAPFD----PRS 107
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRG 156
Q+RA ++ YL+ RGV++ RF RG
Sbjct: 108 GSFQGQDRASAVRDYLVVRGVAAPRFEPPRG 138
>gi|121596103|ref|YP_987999.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42]
gi|120608183|gb|ABM43923.1| OmpA/MotB domain protein [Acidovorax sp. JS42]
Length = 313
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 57/172 (33%), Gaps = 11/172 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + + + + + + + + ++ G I
Sbjct: 110 SSVEASRAERARQDAQRIKALQTKIEAMITE-SPRLNEYRSQIRLDLTPDGLQIQIVDDQ 168
Query: 79 H--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQ 131
+ + ++ +L I L + I++ HTD++ +N +S
Sbjct: 169 NRPMFDSGSALVKPYMRDILHQIGAALGGVEN-RISLSGHTDAVPYGNGDRGYSNWELSA 227
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA+ + L+ G+ + V G A ++ + + N+RI I +
Sbjct: 228 DRANASRRELVAAGMPDAKLGRVVGMAASDLLEPQNPRA--AVNRRITITVL 277
>gi|253990166|ref|YP_003041522.1| flagellar motor protein MotB [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781616|emb|CAQ84779.1| chemotaxis motb protein [Photorhabdus asymbiotica]
Length = 327
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 8/125 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
I + + +E +L+ IA ILN P+ I++ HTD + +
Sbjct: 149 QIIDRENRPMFMIGSAKVESYMSDILRAIAPILNDIPN-KISLSGHTDDLKYANGERGYS 207
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + V G A + D N+RI I + +
Sbjct: 208 NWELSADRANASRRELLIGGLDEEKILRVVGMASTVRLKQED--ASSPVNRRISILVLNK 265
Query: 186 GNIKK 190
K+
Sbjct: 266 QAEKQ 270
>gi|91786622|ref|YP_547574.1| Type I secretion outer membrane protein TolC [Polaromonas sp.
JS666]
gi|91695847|gb|ABE42676.1| Type I secretion outer membrane protein, TolC [Polaromonas sp.
JS666]
Length = 658
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 1/103 (0%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
L ++ I + + I + HTD++GT ++N ++ RA+ I
Sbjct: 556 YFQRGSTELTAASKAVMSRIKELAKARKALDITVIGHTDTMGTAESNEVLGLRRANAIAK 615
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + N I V + N+R EI +
Sbjct: 616 QMQ-QLGLRNTAIIVESNGERNLFVATPQNTNEPRNRRAEITV 657
>gi|222112258|ref|YP_002554522.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY]
gi|221731702|gb|ACM34522.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY]
Length = 313
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 57/172 (33%), Gaps = 11/172 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
+ + + + + + + + + ++ G I
Sbjct: 110 SSVEASRAERARQDAQRIKALQTKIEAMITE-NPRLNEYRSQIRLDLTPDGLQIQIVDDQ 168
Query: 79 H--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQ 131
+ + ++ +L I L + I++ HTD++ +N +S
Sbjct: 169 NRPMFDSGSALVKPYMRDILHQIGAALGGVEN-RISLSGHTDAVPYGNGDRGYSNWELSA 227
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA+ + L+ G+ + V G A ++ + + N+RI I +
Sbjct: 228 DRANASRRELVAAGMPDAKLGRVVGMAASDLLEPQNPRA--AVNRRITITVL 277
>gi|153003288|ref|YP_001377613.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter sp.
Fw109-5]
gi|152026861|gb|ABS24629.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter sp.
Fw109-5]
Length = 385
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
P + I++ D+ + +S+E A + + + ++ G + P+ N
Sbjct: 309 PGVTVRIEAFVDASDDRAGDGKLSEEMARTAGE-RLHQLGVARARLAWSGRGGESPLLPN 367
Query: 167 DTKVGRQNNQRIEI 180
T GR N+RIE+
Sbjct: 368 FTARGRAANRRIEV 381
>gi|118578704|ref|YP_899954.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118501414|gb|ABK97896.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 201
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 10/146 (6%)
Query: 36 TDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ N S A + T + ++ I L L
Sbjct: 59 PAVANVAVRMSSPVATQPASAPIDVTAVAPNKEQVATKRLIGTVHFRFDSSSLSHADLGG 118
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L ++ + F + + + HT +IGT N +S RA+ + + L RGV+ ++
Sbjct: 119 LDKLSKEI--FAGSTVDLTGHTCTIGTDDYNKKLSFRRAEAVATALKARGVNIG---TIE 173
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G P ++ N+R+EI
Sbjct: 174 GRGKCCPAS-----QDKRQNRRVEII 194
>gi|302124486|gb|ADK93849.1| peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa]
Length = 151
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 17/128 (13%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + +N N +G+ + S + I
Sbjct: 36 GCSSKGGD---ASGEGANGGVDPNAGYGA-------------NSGAVDGSLSDEAALRAI 79
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L+ + + L + A L + ++ HTD GT + N+ + + RA
Sbjct: 80 TTFYFEYDSSDLKPEAMRALDVHAKDLKG-SGQRVVLEGHTDERGTREYNMALGERRAKA 138
Query: 137 IKSYLIQR 144
++ YL+ +
Sbjct: 139 VQRYLVLQ 146
>gi|254463910|ref|ZP_05077321.1| outer membrane protein, OmpA/MotB family [Rhodobacterales bacterium
Y4I]
gi|206684818|gb|EDZ45300.1| outer membrane protein, OmpA/MotB family [Rhodobacterales bacterium
Y4I]
Length = 694
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLL 128
+ + + L + L P+ V I+ HTD++G NL
Sbjct: 574 VINVDSVNFDTGSAVIRPQEAEELATLGNALRDLIDRNPAEVFLIEGHTDAVGAATYNLA 633
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+S RA+ + L + + V+G+ +
Sbjct: 634 LSDRRAETVALALTEYFDVPPENMVVQGYGESDLAVSTLDAE 675
>gi|21241580|ref|NP_641162.1| hypothetical protein XAC0810 [Xanthomonas axonopodis pv. citri str.
306]
gi|21106935|gb|AAM35698.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 51
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 154 VRGFAYKYPIDTN-----DTKVGRQNNQRIEIQI 182
+G P+ N D GRQ N+R+EI +
Sbjct: 16 AKGHGESQPVAPNTVNGQDNPGGRQLNRRVEIFL 49
>gi|323527738|ref|YP_004229891.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323384740|gb|ADX56831.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 335
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + G I + + +E +L+ I LN
Sbjct: 147 EANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATARDQVEPYMRDILREIGHTLNDV 206
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD++ +N +S +RA+ + LI G+ + + V G A
Sbjct: 207 PN-RIIVQGHTDAVQYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVMRVLGLASTQ 265
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + R +
Sbjct: 266 NL--NKADPMDPENRRISIIVLNRKS 289
>gi|224536169|ref|ZP_03676708.1| hypothetical protein BACCELL_01035 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522209|gb|EEF91314.1| hypothetical protein BACCELL_01035 [Bacteroides cellulosilyticus
DSM 14838]
Length = 396
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 50/123 (40%), Gaps = 5/123 (4%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
N ++L +AE++ ++ +T ++V + L + + L
Sbjct: 258 GAQNAELKNALVQAENQPVAEVTETQVIVPDPD----IAPRTVFFQIGSAELSPREIMNL 313
Query: 97 QLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+A + +FP+ + + DS GT N +S +RA +K+ L++ + ++V
Sbjct: 314 SYLAEQMKQFPNATYTVNGYADSATGTPAFNKELSLKRAQAVKNALVKNYGIAADRLNVE 373
Query: 156 GFA 158
Sbjct: 374 AGG 376
>gi|218508705|ref|ZP_03506583.1| hypothetical protein RetlB5_14646 [Rhizobium etli Brasil 5]
Length = 56
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+I+ + + G P+ +N T GR N+RI+I I
Sbjct: 11 IIKSMMDDPGRVREEGRGSGEPVASNHTPEGRARNRRIQIIIT 53
>gi|118591643|ref|ZP_01549039.1| hypothetical protein SIAM614_21907 [Stappia aggregata IAM 12614]
gi|118435636|gb|EAV42281.1| hypothetical protein SIAM614_21907 [Stappia aggregata IAM 12614]
Length = 316
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 19/154 (12%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITC------------YIPVHVSFVSEVFLEKKF 92
L + + QD I V+R G I+ + + + K
Sbjct: 163 DELAVVVAQISEEPQDIKIPVTRSGQSISQYSFSTRGYKRKKTLVPIQFVYDQDVMTKAG 222
Query: 93 LPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+ + L K + I + HTD +G+ NL +S +RA+ ++S L+ G S + I
Sbjct: 223 KTSFEDVQEALEKQGAPDIQVIGHTDPVGSDAYNLQLSLKRAEAVRSALLAAGYSGS--I 280
Query: 153 SVRGFAYKYPIDTND----TKVGR-QNNQRIEIQ 181
V G P +D T+ R Q ++R+E
Sbjct: 281 EVLGMGESQPFQFDDPSLYTEEVRNQAHRRVEFV 314
>gi|91785660|ref|YP_560866.1| flagellar motor protein MotB [Burkholderia xenovorans LB400]
gi|91689614|gb|ABE32814.1| outer membrane porin, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 335
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 56/146 (38%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + G I + ++ +E +L+ I LN
Sbjct: 147 EANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATAKDQVEPYMRDILREIGHTLNDV 206
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD+ +N +S +RA+ + LI G+ + + V G A
Sbjct: 207 PN-RIIVQGHTDAAQYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVMRVLGLASTQ 265
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI I + + +
Sbjct: 266 NL--NKADPMDPENRRISIIVLNKKS 289
>gi|237739553|ref|ZP_04570034.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
gi|229423161|gb|EEO38208.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
Length = 232
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 55/145 (37%), Gaps = 16/145 (11%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQL---IATILNKFPS 108
+ Q ++ GI V T I + F E L+ + L I L
Sbjct: 68 KIQKDFEERGIKVDIDPQTGTIKIDDKILFNTGEYLLKPEGKKYLNDFVPIYINLLLNDE 127
Query: 109 ------TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN------RFISVRG 156
+ I I+ HTD +G+ N+ +SQ+RA + Y+ + +I+ G
Sbjct: 128 EVKKELSQIIIEGHTDDVGSYIYNMELSQKRAFEVIKYIYDEMPNFKGKEELKSYITANG 187
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + N + R ++R+E Q
Sbjct: 188 RSNIKVLRDNSGNIDRDKSRRVEFQ 212
>gi|320183885|gb|EFW58714.1| Flagellar motor rotation protein MotB [Shigella flexneri CDC
796-83]
Length = 256
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 63/165 (38%), Gaps = 14/165 (8%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+KK T I + + E +M++ G+ V D ++
Sbjct: 67 KKKSATELGELATSITTIARDAHM---EANLEMEIVPQGLRVLIKDDQ-----NRNMFER 118
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSY 140
+ F +L +A + + I I H D++ N N +S +RA +
Sbjct: 119 GSAQIMPFFKTLLVELAPVFDSL-DNKIIITGHIDAMAYKNNIYNNWNLSGDRALSARRV 177
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L + G+ ++ + V A + +D+ + + N+RIEI + +
Sbjct: 178 LEEAGMPEDKVMQVSAMADQMLLDSKNPQS--AGNRRIEIMVLTK 220
>gi|331640759|ref|ZP_08341894.1| putative motility protein [Escherichia coli H736]
gi|331037557|gb|EGI09777.1| putative motility protein [Escherichia coli H736]
Length = 318
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 153 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 206
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D+ +
Sbjct: 207 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKN 266
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 267 PQS--AGNRRIEIMVLTK 282
>gi|254459885|ref|ZP_05073301.1| OmpA family protein [Rhodobacterales bacterium HTCC2083]
gi|206676474|gb|EDZ40961.1| OmpA family protein [Rhodobacteraceae bacterium HTCC2083]
Length = 291
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 1/112 (0%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L++ + +LIA + I ++ H+D G NL +SQ+RA+ +
Sbjct: 54 VYFPAGGLTLDESGIAQARLIAALAQDCNGVEIIVEGHSDPSGDPAVNLRLSQKRAEQVI 113
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ G P + ++ ++R+E + K
Sbjct: 114 Q-RLGATGLDISNFRAEGLGSARPSNVTGSESDAYYDRRVEFVVIQTNTTTK 164
>gi|218557186|ref|YP_002390099.1| hypothetical protein ECS88_0265 [Escherichia coli S88]
gi|218363955|emb|CAR01620.1| flagellar system protein [Escherichia coli S88]
Length = 296
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A +L+
Sbjct: 131 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVLDSL-DNK 184
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ N+ + V A + +D +
Sbjct: 185 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMADQMLLDAKN 244
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 245 PQS--AGNRRIEIMVLTK 260
>gi|254476965|ref|ZP_05090351.1| outer membrane protein, OmpA/MotB family [Ruegeria sp. R11]
gi|214031208|gb|EEB72043.1| outer membrane protein, OmpA/MotB family [Ruegeria sp. R11]
Length = 587
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 34/102 (33%), Gaps = 4/102 (3%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTLKNNLL 128
+ + + L + L + P+ V I+ HTD++G NL
Sbjct: 467 VINVDSVNFDTGSSVIRPQEAEELAALGNALRELIDRNPAEVFLIEGHTDAVGAATFNLA 526
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+S RA+ + L + + V+G+ T
Sbjct: 527 LSDRRAETVALALTEYFDVPPENMVVQGYGESDLAVRTLTAE 568
>gi|317404170|gb|EFV84613.1| OmpA family domain-containing protein [Achromobacter xylosoxidans
C54]
Length = 312
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 14/103 (13%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + ++ + L + +LN P + + HTD+ GTL NL +SQ+
Sbjct: 211 RVAVYGVYFDTDKAEVKAESKAALDEMGKLLNANPKLKVYVVGHTDNQGTLAGNLELSQK 270
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
RAD + L P N
Sbjct: 271 RADAVVKALEAGYKI--------------PAAPRTGGSNWSRN 299
>gi|163758026|ref|ZP_02165114.1| flagellar motor protein [Hoeflea phototrophica DFL-43]
gi|162284315|gb|EDQ34598.1| flagellar motor protein [Hoeflea phototrophica DFL-43]
Length = 411
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 11/167 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
L + + + + K G +L K + ++ + G++VS +
Sbjct: 248 ALTPEQLLEQLAEADVLKEDIMKALGGALGKLAEGLVVEPAEGGLLVSITDQ-----LDF 302
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL---KNNLLISQERAD 135
+ V + + ++ I +L + IAI+ HTD+ +N +S RA
Sbjct: 303 GMFNVGSAVPGRDLVIAMEKIGEVLAERDGA-IAIRGHTDARPFASDTDDNWRLSLARAH 361
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L++ G+S R V GFA + D ++ + N+RIEI +
Sbjct: 362 SAYYMLVRGGLSEERISQVSGFADRRLKDPDNPLS--EVNRRIEILV 406
>gi|324115583|gb|EGC09522.1| OmpA family protein [Escherichia coli E1167]
Length = 261
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 96 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 149
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D+ +
Sbjct: 150 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKN 209
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 210 PQS--AGNRRIEIMVLTK 225
>gi|256020246|ref|ZP_05434111.1| hypothetical protein ShiD9_15115 [Shigella sp. D9]
gi|332281408|ref|ZP_08393821.1| flagellar motor region [Shigella sp. D9]
gi|332103760|gb|EGJ07106.1| flagellar motor region [Shigella sp. D9]
Length = 307
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+KK T I + + E +M++ G+ V D ++
Sbjct: 118 KKKSATELGELATSITTIARDAHM---EANLEMEIVPQGLRVLIKDDQ-----NRNMFER 169
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSY 140
+ F +L +A + + I I HTD++ N N +S +RA +
Sbjct: 170 GSAQIMPFFKMLLVELAPVFDSL-DNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRV 228
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L + G+ ++ + V A + +D+ + + N+RIEI + +
Sbjct: 229 LEEAGMPEDKVMQVSAMADQMLLDSKNPQS--AGNRRIEIMVLTK 271
>gi|154253326|ref|YP_001414150.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans
DS-1]
gi|154157276|gb|ABS64493.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1]
Length = 298
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 56/134 (41%), Gaps = 11/134 (8%)
Query: 63 IVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+++ + + I + ++ +++ ++ IL K P+ ++I HTD
Sbjct: 161 VIIDETPEGLRIQIVDQDGRSMFPSGNAEPYERTRQLIEEVSNILIKLPN-RVSISGHTD 219
Query: 119 SIGTL----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ +N ++ +RA+ + L G+S++R V G A P+ D
Sbjct: 220 ANPVEGRPGYSNWELTADRANATRRILAGAGLSNDRIYQVIGKADSEPLFPEDPY--MAA 277
Query: 175 NQRIEIQIFPRGNI 188
N+R+ I + ++
Sbjct: 278 NRRLSIVLLREASV 291
>gi|260450574|gb|ACX40996.1| OmpA/MotB domain protein [Escherichia coli DH1]
gi|323943350|gb|EGB39503.1| OmpA family protein [Escherichia coli E482]
Length = 261
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 96 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 149
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D+ +
Sbjct: 150 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKN 209
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 210 PQS--AGNRRIEIMVLTK 225
>gi|170745045|ref|YP_001766503.1| hypothetical protein Mrad2831_6338 [Methylobacterium radiotolerans
JCM 2831]
gi|170659207|gb|ACB28260.1| VirBTraTrw family protein [Methylobacterium radiotolerans JCM 2831]
Length = 185
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 15/192 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++ L L + + +S C + + V + +Q Q
Sbjct: 1 MRALAL-VCVAVAVSACSSHPKPPTVSGRDRVPVNSPVAAQTLQQEAFPPAPVVVQRQGG 59
Query: 62 GIVVSRIGDMITCYIP-----VHVSFVSEVFLEKKFLPMLQLIA--TILNKFPSTVIAIQ 114
V R P + +F P +A L + ++
Sbjct: 60 PQAVQRQQAPRAAARPLYPVVSVQFPWNSA----QFRPTPAQVAHLRGLIAAGVAHVQVR 115
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF-ISVRGFAYKYPIDTNDTKVGRQ 173
TD+ + I++ RA+ K +LI GV S ++ N GR
Sbjct: 116 GRTDNPNPSSGDERIARGRAEAAKDWLIGEGVPSGIIDLNFVSAGDYR--SNNRLSDGRA 173
Query: 174 NNQRIEIQIFPR 185
N+R++I+ +
Sbjct: 174 LNRRVDIEFIRK 185
>gi|254454899|ref|ZP_05068336.1| outer membrane protein, OmpA/MotB family [Octadecabacter
antarcticus 238]
gi|198269305|gb|EDY93575.1| outer membrane protein, OmpA/MotB family [Octadecabacter
antarcticus 238]
Length = 147
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 6/113 (5%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILN----KFPSTVIAIQSHTDSIGTLKNNLL 128
+ ++ L ++ T + + P V I+ +TD++G NL
Sbjct: 30 VIELSAITFPSGSAAIQPDQSRELAILGTAIKDLIVERPGEVFLIEGYTDAVGAAGYNLA 89
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S RA+ + L Q + +G+ T Q N+R ++
Sbjct: 90 LSDRRAETVALALTQYFDVPPANLVTQGYGESLLKV--QTLEAEQANRRATVR 140
>gi|332883547|gb|EGK03830.1| hypothetical protein HMPREF9456_01897 [Dysgonomonas mossii DSM
22836]
Length = 381
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 8/105 (7%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI-GTLKNNLLISQE 132
V + ++K + A L PS + I + D GT N+ +S++
Sbjct: 276 FVSNVVFFRLGSAVIDKNQEVSIYNTAKYLQDNPSKNVKIVGYADKKTGTASINMKLSEK 335
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYK-YPIDTNDTKVGRQNNQ 176
RA + + LI + ++ + V P N N+
Sbjct: 336 RAKNVANALINKYNINSNRVKVEWKGDTEQPYAEN------AWNR 374
>gi|309700460|emb|CBI99754.1| lateral flagellar motor protein B (MotB-like) [Escherichia coli
ETEC H10407]
Length = 296
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+KK T I + + E +M++ G+ V D ++
Sbjct: 107 KKKSATELGELATSITTIARDAHM---EANLEMEIVPQGLRVLIKDDQ-----NRNMFER 158
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSY 140
+ F +L +A + + I I HTD++ N N +S +RA +
Sbjct: 159 GSAQIMPFFKTLLVELAPVFDSL-DNKIIITGHTDAMAYKNNIYDNWNLSGDRALSARRV 217
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L + G+ ++ + V A + +D+ + + N+RIEI + +
Sbjct: 218 LEEAGMPEDKVMQVSAMADQMLLDSKNPQS--AGNRRIEIMVLTK 260
>gi|317127354|ref|YP_004093636.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
gi|315472302|gb|ADU28905.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
Length = 232
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 16/146 (10%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIA----TILNK- 105
++ + D+ + V + + F E L+ + L +L +
Sbjct: 68 EDLNEEFSDSSLAVEIDENTGALIFNTDILFEFDEAELKPEGFEFLDEFVPTYLEVLLEG 127
Query: 106 -FPST--VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR-------GVSSNRFISVR 155
+ I I+ H D G NL +SQERA + +++ ++V
Sbjct: 128 GYDEYISEIIIEGHADRTGGYLYNLELSQERAFSVAEHILSDRFSDPTVQEPLKEKLTVN 187
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQ 181
G +Y + ++++R+E +
Sbjct: 188 GRSYTDGRTDEEGNYSHEDSRRVEFK 213
>gi|256024126|ref|ZP_05437991.1| hypothetical protein E4_12175 [Escherichia sp. 4_1_40B]
gi|300947286|ref|ZP_07161489.1| OmpA family protein [Escherichia coli MS 116-1]
gi|301019019|ref|ZP_07183235.1| OmpA family protein [Escherichia coli MS 196-1]
gi|299882424|gb|EFI90635.1| OmpA family protein [Escherichia coli MS 196-1]
gi|300453087|gb|EFK16707.1| OmpA family protein [Escherichia coli MS 116-1]
gi|315134915|dbj|BAJ42074.1| putative motility protein [Escherichia coli DH1]
Length = 256
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 91 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 144
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D+ +
Sbjct: 145 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKN 204
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 205 PQS--AGNRRIEIMVLTK 220
>gi|302875501|ref|YP_003844134.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|307687955|ref|ZP_07630401.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|302578358|gb|ADL52370.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B]
Length = 233
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 73/205 (35%), Gaps = 19/205 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++ + + F M I + + + + D + K+ ++ E++ + +L
Sbjct: 24 VMTTVAIVFFFMMLIFTYSVYGKYRNVQVTYDKL--DDIAKQRAELYERLENDLKPKL-G 80
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT---ILNKFPSTV-----IA 112
I+ + + + V + L + + + + ++ L P +
Sbjct: 81 DDIIFDKENGRLEIK-TEVLFQVDKYELTGEGVKIAKEVSEAFYTLFSNPVYRDKIKYVE 139
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF---ISVRGFAYKYPID---TN 166
++ HTD+ N +S RA + ++ G + G + P
Sbjct: 140 VKGHTDNTFLADYNRFLSTNRAASFVNAMVPNGSKYEEYAAYFKSSGMSKFEPKVGSVDG 199
Query: 167 DTKVGRQNNQRIEIQI-FPRGNIKK 190
+ V + N+RIEI I +I++
Sbjct: 200 QSMVEQDQNRRIEINIELNDKDIEE 224
>gi|227820870|ref|YP_002824840.1| flagellar motor protein MotB [Sinorhizobium fredii NGR234]
gi|227339869|gb|ACP24087.1| chemotaxis protein motility protein B [Sinorhizobium fredii NGR234]
Length = 392
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 10/129 (7%)
Query: 61 TGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G+VV+ + I + V K + ++ I T+L + +AI+ H
Sbjct: 262 EGLVVTPSEGGLLVTISEQTDAPMFAVGSAVPAKDLVLAMEKIGTLLAERQGA-VAIRGH 320
Query: 117 TDSIGTLK---NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
TD +N +S RA L++ G+ R + GFA + ND
Sbjct: 321 TDGRPFKDGTYDNWRLSAARAQSAYYMLVRGGLKEQRVNQISGFADRRLQVPNDPYA--A 378
Query: 174 NNQRIEIQI 182
N+RIEI +
Sbjct: 379 ANRRIEILL 387
>gi|319405416|emb|CBI79035.1| putative flagellar motor protein MotB [Bartonella sp. AR 15-3]
Length = 384
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 10/168 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH-- 79
+K+K + ++ + ++ + D + D + V I + + +
Sbjct: 185 KNQKQKTLVKETTQENNFSENSRALAKDLTDLIEETNSDILVHVKPIKEGVMIELMDQPK 244
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERA 134
+ V + + ++ +A I+ K I I HTD+ +N +S RA
Sbjct: 245 YEMFKVGLSVPTARTIDLIASMAGIIAKHQG-DIVISGHTDARPYRSTVYDNWQLSTARA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L++ G+ R + V G+A + + D N+RI I I
Sbjct: 304 QMAYYMLVRGGLDEKRILRVEGYADRDLKNKKDPYA--AENRRISIFI 349
>gi|209745374|gb|ACI70994.1| putative motility protein [Escherichia coli]
Length = 261
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 96 EANLEMEIVPQGLRVQIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 149
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 150 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 209
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 210 PQS--AGNRRIEIMVLTK 225
>gi|312196129|ref|YP_004016190.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
gi|311227465|gb|ADP80320.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
Length = 452
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 19/181 (10%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE--DEFQMQLQDTGIVVSRIGDMITCY 75
C A + V + + + G++ + + + + + TG+ + D +
Sbjct: 280 CAAARAAQCSVLSNVTASETAIPAENGAADEPVDFPAQPRPRPAGTGVFTVSLPDQV--- 336
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L L + + + +V+ + HTD+ GT N L+S+ RAD
Sbjct: 337 ----LFARDSNDLSPDADLTLTAVVSEVRGLRGSVVNVIGHTDTTGTDAYNRLLSKSRAD 392
Query: 136 VIKSYLIQRGVSSNRFI----SVRGFA---YKYPIDTNDTKVGRQNNQRIEIQIF--PRG 186
+ L+ RG+ S+ G P D D + + ++R+E+ I P G
Sbjct: 393 AVADALVARGLPVASRTGAGSSIPGPGCGPEHRP-DGTDDERAMRCDRRVELVIAVPPEG 451
Query: 187 N 187
N
Sbjct: 452 N 452
>gi|209885628|ref|YP_002289485.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
gi|209873824|gb|ACI93620.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
Length = 275
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 54/149 (36%), Gaps = 18/149 (12%)
Query: 50 AEDEFQMQLQD--------TGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQ 97
A + LQD I+ + + I + ++ +++
Sbjct: 118 ASASLRQALQDMPEMTELSKHIMFEETKNGLNLEIVDQDGRSMFAEGSREPYERTRMLIR 177
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLI---SQERADVIKSYLIQRGVSSNRFISV 154
+A L + P IAI HT + L+ S +RA+ ++ L G+ + SV
Sbjct: 178 KLAAPLRQSP-LRIAIVGHTSANVPLRPGYDAFDLSADRANAVRQILQNEGLPATHIFSV 236
Query: 155 RGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
G A P+ +D N+R+ I +
Sbjct: 237 SGKADTEPLFPDDP--TLSANRRVTITLM 263
>gi|320643247|gb|EFX12446.1| hypothetical protein ECO9389_21954 [Escherichia coli O157:H- str.
493-89]
gi|320648894|gb|EFX17512.1| hypothetical protein ECO2687_10031 [Escherichia coli O157:H- str. H
2687]
Length = 256
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 91 EANLEMEIVPQGLRVQIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 144
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 145 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 204
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 205 PQS--AGNRRIEIMVLTK 220
>gi|302383636|ref|YP_003819459.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194264|gb|ADL01836.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 298
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 10/144 (6%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPV--HVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
E + I + G I + + + +L+ IA ++N+ P+
Sbjct: 151 PELAELSKQLIIDQTPEGLRIQLVDQEGRSMFDQNSARPNARAQVLLRAIAGVVNRLPN- 209
Query: 110 VIAIQSHTD-----SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
I+I HT ++ + +S RAD ++ L GV ++R SV G A P+
Sbjct: 210 RISISGHTSAVAGSGRASVATDWPLSANRADASRAILQAAGVDADRVYSVAGKAGSDPLY 269
Query: 165 TNDTKVGRQNNQRIEIQIFPRGNI 188
+D N+RI I + +
Sbjct: 270 PDDP--SLAGNRRIAIVLLREAPV 291
>gi|257460460|ref|ZP_05625561.1| putative chemotaxis protein MotB [Campylobacter gracilis RM3268]
gi|257441791|gb|EEV16933.1| putative chemotaxis protein MotB [Campylobacter gracilis RM3268]
Length = 340
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL-----IATIL 103
K + + +L I + +T + L++ L+ A +L
Sbjct: 176 KIIADLKEKL-GGKIRIDNESGAMTLS-SSILFDKGSSELKEGAKETLRSTLQSYFAALL 233
Query: 104 NKF----PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS--NRFISVRGF 157
N I I+ HTDS G NL +SQ RA + ++ +++ G
Sbjct: 234 NNDEIRENLDQIIIEGHTDSDGGYLYNLELSQNRAFAVMDFINSWNKDERLQKYLIASGR 293
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIF 183
+Y P+ + ++RIEI+
Sbjct: 294 SYTQPVMR-RGVEDKDASRRIEIKFT 318
>gi|83747601|ref|ZP_00944638.1| Probable chemotaxis motB protein [Ralstonia solanacearum UW551]
gi|207738644|ref|YP_002257037.1| chemotaxis protein (motility protein b) [Ralstonia solanacearum
IPO1609]
gi|83725781|gb|EAP72922.1| Probable chemotaxis motB protein [Ralstonia solanacearum UW551]
gi|206592012|emb|CAQ58918.1| chemotaxis protein (motility protein b) [Ralstonia solanacearum
IPO1609]
Length = 314
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 56/143 (39%), Gaps = 12/143 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + + + G+ + + + + ++ +L+ + + LN
Sbjct: 137 MNQFKHQLLIDMTSEGLRIQIVDQQ-----NRPMFANASAEVQPYMRTILRELGSALNDV 191
Query: 107 PSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I++ HTD+ N +S +RA+ + LI G+ + V G P
Sbjct: 192 PN-PISLSGHTDATQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVP 250
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
+D T N+RI I +
Sbjct: 251 LD--KTDAFNPINRRISIVVLNN 271
>gi|324019871|gb|EGB89090.1| OmpA family protein [Escherichia coli MS 117-3]
Length = 211
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 46 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKRLLVELAPVFDSL-DNK 99
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D+ +
Sbjct: 100 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKN 159
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 160 PQS--AGNRRIEIMVLTK 175
>gi|229495751|ref|ZP_04389479.1| outer membrane protein HMP [Porphyromonas endodontalis ATCC 35406]
gi|229317325|gb|EEN83230.1| outer membrane protein HMP [Porphyromonas endodontalis ATCC 35406]
Length = 398
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 8/108 (7%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
L +L IA + + + I + D G NL +S+ R
Sbjct: 296 LSEKAITFKFDSDKLTPNQEIVLYEIAKFVKE-SNQPITVIGFADVTGNANYNLALSERR 354
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
A + + L + + I+V DT R N R+ I
Sbjct: 355 AKAVANILTTQYDVPSDMINVEWQGETEQFDT------RAWN-RVVIV 395
>gi|330994155|ref|ZP_08318083.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
gi|329758622|gb|EGG75138.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
Length = 411
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/109 (12%), Positives = 33/109 (30%), Gaps = 5/109 (4%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI-----GTLKNNLLISQER 133
L + ++ + A +T I + +TD+ ++ +
Sbjct: 302 VFFDWDRSDLTDRARAIVAVAAQASTNTQTTRIEVNGYTDNSAARPGPQGEHYNQALSLK 361
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ + R I + G+ P+ N+R+EI +
Sbjct: 362 RAQVIKAELVRDGVPGPAIDIHGYGDANPLVQTGANTREAQNRRVEIIL 410
>gi|91977304|ref|YP_569963.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91683760|gb|ABE40062.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 286
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 54/173 (31%), Gaps = 19/173 (10%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMITCYIPVH-- 79
+ + A + LQD +V + +
Sbjct: 108 EAGGAGSSASKAKAEREFALASASLRQALQDVPELAEMSKNVVFEETPLGLNLELTDQEG 167
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN----LLISQER 133
+ ++ ++ +A L + ++I HT + ++ +S R
Sbjct: 168 RPMFPEGSAVPYERTRMLIARLAAPLRAT-ALRVSIVGHTAAAPVNADDEYDAFDLSTSR 226
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
A+ ++ L + G++++R + V G P+ N+R+ I +
Sbjct: 227 ANAVRQVLKREGLAASRIMLVAGKGDGEPLFPEAP--TLAANRRVTISLLREN 277
>gi|297537840|ref|YP_003673609.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
gi|297257187|gb|ADI29032.1| OmpA/MotB domain protein [Methylotenera sp. 301]
Length = 261
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 52/168 (30%), Gaps = 24/168 (14%)
Query: 28 VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH-------- 79
V + + + KA+ T + + + +T +P
Sbjct: 104 VITGDAAKVTLTGNVDSEDIKKAKGAEAQVFFGTDVTI---DNQLTVKVPEALHAATETP 160
Query: 80 ----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L L L + S I ++D G L N +S+ RA
Sbjct: 161 TAKLYFDTGKTTLPSDASQTLAATIKWLKAYSSMKAVISGYSDPRGDLAKNEELSKSRAK 220
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYP-IDTNDTKVGRQNNQRIEIQI 182
++ L G+ +R + P I + +G +R+E+ I
Sbjct: 221 AVREMLEDAGIDEDRIE------MRKPEIVESGGDLGAA--RRVEVSI 260
>gi|149189846|ref|ZP_01868126.1| chemotaxis LafU protein [Vibrio shilonii AK1]
gi|148836332|gb|EDL53289.1| chemotaxis LafU protein [Vibrio shilonii AK1]
Length = 329
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 61/181 (33%), Gaps = 22/181 (12%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAE----------DEFQMQLQDTGIVVSRIGDM 71
S F D + + D E + + D + V+
Sbjct: 98 SVHTVTSFFQGDRDGPESDSLINGTFDTQERLEALAKVVNEMMRQINADGNVDVTVTPQG 157
Query: 72 ITCYIPVHV----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK--- 124
+ + L F +L +A + + + +I I HTD+ K
Sbjct: 158 LRIVLQDDYKQNMFRRGGSTLTPFFEDLLLALAPVFQRVENPMI-ISGHTDATQYRKAFS 216
Query: 125 --NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+N +S RA+ + L+ G+ R + V G + + ++ D K N+RIE+ I
Sbjct: 217 SSSNWELSSSRANSARQTLVAGGMPEQRVLQVTGMSDRALLNQQDPKS--SENRRIELFI 274
Query: 183 F 183
Sbjct: 275 L 275
>gi|315224598|ref|ZP_07866424.1| probable immunoreactive antigen PG32 [Capnocytophaga ochracea
F0287]
gi|314945464|gb|EFS97487.1| probable immunoreactive antigen PG32 [Capnocytophaga ochracea
F0287]
Length = 387
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
++K +D+ + VV ++ + V+F ++ ++ LP ++ IA+
Sbjct: 252 QRQVNKLQDDLEAARNKKPEVVEKVVTKNKKTLESVVTFRVAKSTIDASQLPNVERIASY 311
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
LNK+ + ++I+ + G L+ N ++ RA+ +K+ L++R S I G
Sbjct: 312 LNKYRNAKVSIKGYASPEGNLEKNKQLATARAEAVKNLLVKRYKISADRIQAEGNG 367
>gi|221134028|ref|ZP_03560333.1| outer membrane protein [Glaciecola sp. HTCC2999]
Length = 249
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 44/138 (31%), Gaps = 5/138 (3%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPV----HVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ Q + + I P + + L L+A +L K P
Sbjct: 106 AQLQQMVDEPVIQQVNYTTPSVFDFPEMQSHIQFTTGISEVASAYHGQLALLAQVLTKQP 165
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ + D GT +NL +S R + ++ + S I + T++
Sbjct: 166 QLQVTLTGFADLRGTDDDNLALSSARVAAV-KSMLVKEGVSEDQIKTIALGEARALQTSN 224
Query: 168 TKVGRQNNQRIEIQIFPR 185
++R+ I + P
Sbjct: 225 WDESLVFDRRVTIDLAPN 242
>gi|229588694|ref|YP_002870813.1| putative exported flagellar protein [Pseudomonas fluorescens SBW25]
gi|229360560|emb|CAY47417.1| putative exported flagellar protein [Pseudomonas fluorescens SBW25]
Length = 302
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ L+ L +I + P+ I + H+D+ G N +S+
Sbjct: 171 VKQTEVGFPGGGIELDAAAKKKLDVILAFMKADPTVNHIELNGHSDNGGNRLTNRDVSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
R + ++ I++R YP+ N
Sbjct: 231 RGLAVMD-YLKANGIPESQITLRFHGESYPLAPNT 264
>gi|255536190|ref|YP_003096561.1| OmpA [Flavobacteriaceae bacterium 3519-10]
gi|255342386|gb|ACU08499.1| OmpA [Flavobacteriaceae bacterium 3519-10]
Length = 474
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 39/114 (34%), Gaps = 3/114 (2%)
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
D T + + + + + L A I+ I HTD G NL
Sbjct: 348 ADDATKALDNILFNFDKATIRPESKEKLDAAAQIIKDSQG-KFLIIGHTDKKGAESYNLK 406
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-DTKVGRQNNQRIEIQ 181
+SQ RA + ++ ++ + G + + R ++++ ++
Sbjct: 407 LSQRRAGAVVD-ALEARGVADSSLKSMGVGEQDATVPETASNAERLKDRKVVVK 459
>gi|117924306|ref|YP_864923.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1]
gi|117608062|gb|ABK43517.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1]
Length = 255
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 70/196 (35%), Gaps = 32/196 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++ L + ++ +IS +ASR++ + + + K D +
Sbjct: 26 LMTALVMLFLVVMSISMIAVASRDEVRQ------------NQRKDEITKVFDALEQSAAQ 73
Query: 61 TGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-------VIA 112
+ + + T + +L + L+ +L K +
Sbjct: 74 SNLPLVINRKEQTLSFGNSARFELDSFYLSAQVRQQLKDFVPMLLKVRKKGEGKWLKRVH 133
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQ------RGVSSNRFISVRGFAYKYPIDTN 166
I+ +TD IGT N+ +S RA + L++ + R I + G +
Sbjct: 134 IEGYTDDIGTYLYNVRLSMNRAQAVLCTLMEAEVSEAQRRELQRMIIIDG------AAST 187
Query: 167 DTKVGRQNNQRIEIQI 182
+ R+ ++R+EI++
Sbjct: 188 SIRSSREESRRVEIRL 203
>gi|302878239|ref|YP_003846803.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
ES-2]
gi|302581028|gb|ADL55039.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
Length = 328
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 53/147 (36%), Gaps = 22/147 (14%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPST 109
++ + + ++ G I + + LE +L I LN P+
Sbjct: 146 EKLKQFKSQILLDITSEGLRIQIVDEKNRPMFQSGRAQLEPYTREILHAIGQTLNDVPN- 204
Query: 110 VIAIQSH-----TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA------ 158
++I H G +N +S +RA+ + LI G++ + + V G +
Sbjct: 205 KVSISGHTDASVYGGGGIGYSNWELSADRANASRRELIAGGMADEKIVRVVGLSSAVLFK 264
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ P+ N+RI + I +
Sbjct: 265 KEDPLSPT--------NRRISLIIMNK 283
>gi|189466361|ref|ZP_03015146.1| hypothetical protein BACINT_02736 [Bacteroides intestinalis DSM
17393]
gi|189434625|gb|EDV03610.1| hypothetical protein BACINT_02736 [Bacteroides intestinalis DSM
17393]
Length = 385
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 49/166 (29%), Gaps = 19/166 (11%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM------QLQDTGIVVSRIGDMITCYIPVH 79
KK D D +N + L + V + I P
Sbjct: 228 KKFAKVSDIDEDAINAEINRYRSELAQAQADLANCKNSLANMKPEVKEVIKEIQTAGPRA 287
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVI 137
+ F L+ +QL A IL P + + D G+ N +S++RA V+
Sbjct: 288 IFFKIGSARLDDYGKVNIQLAAKILKANPDKKYKVAGYCDKATGSAAYNQKLSEKRAQVV 347
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN--QRIEIQ 181
LI + GF T+ N R+ I
Sbjct: 348 YDALIAE-GVDKDQLEFVGFG--------GTENMFSKNYLNRVVIL 384
>gi|294782117|ref|ZP_06747443.1| hypothetical protein HMPREF0400_00084 [Fusobacterium sp. 1_1_41FAA]
gi|294480758|gb|EFG28533.1| hypothetical protein HMPREF0400_00084 [Fusobacterium sp. 1_1_41FAA]
Length = 232
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 58/198 (29%), Gaps = 22/198 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+S M + + K H S EF+ L+ +
Sbjct: 17 LMSALTMIFLFISVTYMLQVNKQKEHIEVIAKDFRNTKQSIYKDLNKEFEEDLKRWNAYI 76
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ----LIATIL-NKFPST--VIAIQSHTD 118
+ IT P V + F +L+ +L + I I+ HT
Sbjct: 77 DKDTLSITFKEPDVFFDVGSSEINSNFKLILKDFFPRYIEMLYKNYRDEIEEIRIEGHTS 136
Query: 119 SIGT--------LKNNLLISQERADVIKSYLIQRGVSSNRFI------SVRGFAYKYPID 164
S N+ +SQ R+ + Y + + G +Y + I
Sbjct: 137 SEWNKDDDDLQAYFKNMSLSQARSKSVLEYCMLLDSMEEYRDFLIEKATANGLSYSHRII 196
Query: 165 TNDTKVGRQNNQRIEIQI 182
N K ++R+E +I
Sbjct: 197 ENG-KENYNKSRRVEFKI 213
>gi|256819163|ref|YP_003140442.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256580746|gb|ACU91881.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 387
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATI 102
++K +D+ + VV ++ + V+F ++ ++ LP ++ IA+
Sbjct: 252 QRQVNKLQDDLEAARNKKPEVVEKVVTKNKKTLESVVTFRVAKSTIDASQLPNVERIASY 311
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
LNK+ + ++I+ + G L+ N ++ RA+ +K+ L++R S I G
Sbjct: 312 LNKYRNAKVSIKGYASPEGNLEKNKQLATARAEAVKNLLVKRYKISADRIQAEGNG 367
>gi|121595624|ref|YP_987520.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42]
gi|120607704|gb|ABM43444.1| OmpA/MotB domain protein [Acidovorax sp. JS42]
Length = 223
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 7/110 (6%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAED--EFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ + L + + + + E ++LQ I+ +P V F
Sbjct: 68 ETETRLQAAAGPATLLRAAEVPPQRLEQTRALLVELQAQPTP----EQAISIDLPADVLF 123
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ L L A +L +P I + HTD G N +SQ
Sbjct: 124 DFDKAELRADAARSLDKAAELLKSYPQAPIDVVGHTDGKGGDTYNDALSQ 173
>gi|296282270|ref|ZP_06860268.1| OmpA/MotB domain-containing protein [Citromicrobium bathyomarinum
JL354]
Length = 273
Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 11/143 (7%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATIL 103
D+ E + ++ + I + + + + + + L + +L IA +
Sbjct: 132 DRLEKDPRLAKLMSQIKMVDTTEGVRIDLVDDADFSMFNLGTTVLTRDAAELLAAIAQAI 191
Query: 104 NKFPSTVIAIQSHT----DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ I ++ HT NN +S RA+ + L+ G+ + F + G A
Sbjct: 192 -EPEKREIIVRGHTDSLKWKNPGRINNWSLSAGRAEATRQTLMNEGIPDDSFRRIEGVAD 250
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
+ +D R N+RI I +
Sbjct: 251 TELLVKDDPADPR--NRRISIVL 271
>gi|315287740|gb|EFU47143.1| OmpA family protein [Escherichia coli MS 110-3]
Length = 211
Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A +L+
Sbjct: 46 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVLDSL-DNK 99
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ N+ + V A + +D +
Sbjct: 100 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMADQMLLDAKN 159
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 160 PQS--AGNRRIEIMVLTK 175
>gi|327402295|ref|YP_004343133.1| hypothetical protein Fluta_0286 [Fluviicola taffensis DSM 16823]
gi|327317803|gb|AEA42295.1| hypothetical protein Fluta_0286 [Fluviicola taffensis DSM 16823]
Length = 190
Score = 47.3 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 13/100 (13%)
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L + L + + + I HTD G NL ++Q ++ +K +L++R V ++ + +
Sbjct: 90 LDSVVLFLQQNKNVSVEIGVHTDCRGNDTMNLKLTQRHSEYVKYFLVKRCVPESQIV-AK 148
Query: 156 GFAYKYPIDTND--------TKVGRQN----NQRIEIQIF 183
G+ I + + K + N+R E++I
Sbjct: 149 GYGETEWIISEEEINKYRKTNKAHYEKLHVINRRTELKII 188
>gi|217077698|ref|YP_002335416.1| motility protein B [Thermosipho africanus TCF52B]
gi|217037553|gb|ACJ76075.1| motility protein B [Thermosipho africanus TCF52B]
Length = 288
Score = 47.3 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 13/120 (10%), Positives = 32/120 (26%), Gaps = 1/120 (0%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
G A L + E + + V +
Sbjct: 46 VAVGLTSALNGNPPSVLTGGKSLQTEPLISQNPGVYQEILKISEEYKGKVTVEERDEGTL 105
Query: 74 CYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I + L + +L+ + ++ + + V+ I + + I +N++ S
Sbjct: 106 ITISDLDIFNPGSARLTAEAKKLLEKLGAVIIEHTTNVLEIYGYANEIPVPENSIYQSNW 165
>gi|86143302|ref|ZP_01061704.1| ATP phosphoribosyltransferase [Leeuwenhoekiella blandensis MED217]
gi|85830207|gb|EAQ48667.1| ATP phosphoribosyltransferase [Leeuwenhoekiella blandensis MED217]
Length = 239
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 18/152 (11%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITC-------------YIPVHVSFVSEVFL-----E 89
D + Q +L+ + + + ++F L +
Sbjct: 86 DALINNIQERLERNQRAIEEDEERLRLAKLNKKSKASKTPRPEADLTFRPSFKLARLVHD 145
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+K L + L P T I I HTD IG ++N I+ E+A I+ ++I+
Sbjct: 146 QKAAEFLAQVERQLKINPLTQIEIIGHTDHIGDDRDNYKIALEQAQKIRQFIIKSFNLPE 205
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ P+ + + + N R E+
Sbjct: 206 NQVIATSKGEADPLYPREMEDKIELNNRYELI 237
>gi|312959245|ref|ZP_07773763.1| OmpA/MotB [Pseudomonas fluorescens WH6]
gi|311286505|gb|EFQ65068.1| OmpA/MotB [Pseudomonas fluorescens WH6]
Length = 302
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 2/95 (2%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
+ L+ L +I + P+ I + H+D+ G +N +S+
Sbjct: 171 VKQTEVGFPGGGIELDAAAKQKLAVIIEFMKADPTVNHIELNGHSDNSGNRLSNRDVSRR 230
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
RA + Y I++R YP+ N
Sbjct: 231 RALAVMDYFKAN-GIQESQITLRFHGESYPLVPNT 264
>gi|217978517|ref|YP_002362664.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
gi|217503893|gb|ACK51302.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
Length = 325
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 40/104 (38%), Gaps = 7/104 (6%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L + +A + + ++ + HTD G + N+ +S RA+ + +Y
Sbjct: 220 FEYRSASLTDEGRQAADELARAIREQQPQIVRLVGHTDLRGGPEYNMKLSVARAEAVAAY 279
Query: 141 LIQRGVSSNRFISVRGFAYKYPI----DTNDTKVG-RQNNQRIE 179
L + ++ + G P+ + T+ N+R+E
Sbjct: 280 LKENNIAVT--VEPEGVGAAEPLQLSDASGLTQDDVYALNRRVE 321
>gi|163794640|ref|ZP_02188610.1| OmpA/MotB [alpha proteobacterium BAL199]
gi|159179913|gb|EDP64438.1| OmpA/MotB [alpha proteobacterium BAL199]
Length = 215
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 47/172 (27%), Gaps = 15/172 (8%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV 78
G + R + V S+ +D + V+
Sbjct: 51 GNSGRAPAPRSEPSAAPPSSVPTATSQSVTVNDDAL------DAVPVAASFSGQPYLAST 104
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG-------TLKNNLLISQ 131
S L L +A + + H + N +S
Sbjct: 105 VYFGHSSARLTGTERAELAKVAQTAIA-SGAAVRVIGHASARTADLDLRAHEVANFTMSL 163
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+RA+ + LI G+ +NR I + P G N+R+E+ +
Sbjct: 164 KRANAVADVLIHAGLPANR-IRIDALGDSQPEFYEVMPSGEAGNRRVEVFLI 214
>gi|220921404|ref|YP_002496705.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219946010|gb|ACL56402.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
Length = 213
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + + LP+++++ L + S++I I HTD+ G+ + N L+S+ RA+
Sbjct: 99 DVPFAYNSATIGRTALPVVKMLGATLARPQLASSIILIVGHTDAKGSDRVNQLLSERRAE 158
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+K Y++Q + G+ D + N+R+
Sbjct: 159 AVKQYIVQNYGVPAGNLVAVGYGKSRLKDPANPLA--PANRRV 199
>gi|149926065|ref|ZP_01914328.1| hypothetical protein LMED105_03415 [Limnobacter sp. MED105]
gi|149825353|gb|EDM84564.1| hypothetical protein LMED105_03415 [Limnobacter sp. MED105]
Length = 253
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/194 (10%), Positives = 66/194 (34%), Gaps = 17/194 (8%)
Query: 6 GLSMFIMTTISGCGL--ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ +F++ ++ E+ + + + K + ++ T
Sbjct: 31 LMILFLVIMVTALASITKKAEQTVKETPEIKEQVDMTKVRLQEISNICQHLSEEVAKTNT 90
Query: 64 VVSRIGDMITCYIPVHV-SFVSEVFLEKKFLPMLQLIATILNKFPST--------VIAIQ 114
V + + L + L + + +T + I+
Sbjct: 91 SVEVDCKLNRINFGEVGRFQSDQFRLGAEGEQALNQVVPAILSTANTPTGQKWLKQVLIE 150
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQR------GVSSNRFISVRGFAYKYPIDTNDT 168
TD+ G+ NL +S +R++ + L++ +++++ V+ + N
Sbjct: 151 GFTDTDGSYLYNLNLSLKRSEWVMCTLLRNDQSTAVHLNNDQRQQVKKLFLAGGVAFNHV 210
Query: 169 KVGRQNNQRIEIQI 182
+ + ++R+E+++
Sbjct: 211 RDSKDASRRVELRL 224
>gi|254476621|ref|ZP_05090007.1| OmpA family protein [Ruegeria sp. R11]
gi|214030864|gb|EEB71699.1| OmpA family protein [Ruegeria sp. R11]
Length = 176
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 12/113 (10%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP--STVIAIQSHTDSIGTLKNNLLISQE 132
L + + L+A +LN P + + H+D+ G N +S++
Sbjct: 65 RESHIFFLSGGSRLSPQMERQVVLLAGVLNTAPMKDACLRLTGHSDASGGRDANRRLSEQ 124
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR----QNNQRIEIQ 181
RA+V+ + L +R +R VRG + P+ G + N+R+ I+
Sbjct: 125 RAEVVAAALRRRLDRGDRVEEVRGVGEETPL------EGWPSTARENRRVSIE 171
>gi|300921970|ref|ZP_07138116.1| OmpA family protein [Escherichia coli MS 182-1]
gi|301325438|ref|ZP_07218924.1| OmpA family protein [Escherichia coli MS 78-1]
gi|300421640|gb|EFK04951.1| OmpA family protein [Escherichia coli MS 182-1]
gi|300847736|gb|EFK75496.1| OmpA family protein [Escherichia coli MS 78-1]
Length = 211
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 46 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 99
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D+ +
Sbjct: 100 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKN 159
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 160 PQS--AGNRRIEIMVLTK 175
>gi|149184216|ref|ZP_01862534.1| OmpA/MotB [Erythrobacter sp. SD-21]
gi|148831536|gb|EDL49969.1| OmpA/MotB [Erythrobacter sp. SD-21]
Length = 276
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 64/174 (36%), Gaps = 14/174 (8%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDK---AEDEFQMQLQDTGIVVSRIGDMITCY 75
G S + + KR S + K ++ E + ++ ++ + G I
Sbjct: 104 GTNSLTIPRDATGGPKEGVATIKRINSRVSKMIESDKELKRLMRQVRMIDTTTGIRIDLV 163
Query: 76 IPVHV--SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT----DSIGTLKNNLLI 129
+ + L +L +IA L I ++ HT + NN +
Sbjct: 164 DDANFSMFSLGTTVLTNDARELLVVIAAALAP-EGGKITVRGHTDALRYRYPSRVNNWSL 222
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYP-IDTNDTKVGRQNNQRIEIQI 182
S RA+ + LI+ G++ RF + G A P I N + N+RI I +
Sbjct: 223 SAGRAEETRQTLIREGINQERFRRIEGVAATEPLIGDNPSD---PRNRRISISL 273
>gi|253774745|ref|YP_003037576.1| hypothetical protein ECBD_3391 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|300929521|ref|ZP_07144987.1| OmpA family protein [Escherichia coli MS 187-1]
gi|253325789|gb|ACT30391.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|300462520|gb|EFK26013.1| OmpA family protein [Escherichia coli MS 187-1]
Length = 211
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+KK T I + + E +M++ G+ V D ++
Sbjct: 22 KKKSATELGELATSITTIARDAHM---EANLEMEIVPQGLRVLIKDDQ-----NRNMFER 73
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSY 140
+ F +L +A + + I I HTD++ N N +S +RA +
Sbjct: 74 GSAQIMPFFKTLLVELAPVFDSL-DNKIIITGHTDAMAYKNNIYDNWNLSGDRALSARRV 132
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L + G+ ++ + V A + +D+ + + N+RIEI + +
Sbjct: 133 LEEAGMPEDKVMQVSAMADQMLLDSKNPQS--AGNRRIEIMVLTK 175
>gi|309797860|ref|ZP_07692242.1| OmpA family protein [Escherichia coli MS 145-7]
gi|308118544|gb|EFO55806.1| OmpA family protein [Escherichia coli MS 145-7]
Length = 211
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+KK T I + + E +M++ G+ V D ++
Sbjct: 22 KKKSATELGELATSITTIARDAHM---EANLEMEIVPQGLRVLIKDDQ-----NRNMFER 73
Query: 84 SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN---NLLISQERADVIKSY 140
+ F +L +A + + I I HTD++ N N +S +RA +
Sbjct: 74 GSAQIMPFFKTLLVELAPVFDSL-DNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRV 132
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
L + G+ ++ + V A + +D+ + + N+RIEI + +
Sbjct: 133 LEEAGMPEDKVMQVSAMADQMLLDSKNPQS--AGNRRIEIMVLTK 175
>gi|152980289|ref|YP_001353788.1| flagellar motor protein MotB [Janthinobacterium sp. Marseille]
gi|151280366|gb|ABR88776.1| MotB chemotaxis protein [Janthinobacterium sp. Marseille]
Length = 328
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 11/155 (7%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPM 95
+ +R ++D Q I ++ G I + + ++ L+ +
Sbjct: 128 ALKERIEKAIDTI-PGLQQFKNQLLIDITTEGLRIQIVDEKNRPMFALARAELQPYTKVI 186
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNR 150
L IA ILN P+ I++ HTD+ +N +S +RA+ + LI G++ N+
Sbjct: 187 LHEIAKILNDIPN-RISLSGHTDATPYSSGEKSYSNWELSSDRANASRRELIAGGMAENK 245
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ V G + + + + N+RI I + +
Sbjct: 246 VLRVVGLSSA--VLFDSSDPLNPVNRRISIIVLNK 278
>gi|124004173|ref|ZP_01689019.1| putative exported isomerase [Microscilla marina ATCC 23134]
gi|123990243|gb|EAY29742.1| putative exported isomerase [Microscilla marina ATCC 23134]
Length = 777
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 42/107 (39%), Gaps = 9/107 (8%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ + L++ L +A +L K + + H D + +S +R
Sbjct: 566 VKVNNVYFDKEQKVLDQNAQRTLLSVANLLKKNRHYKLELSGHID----PAEPVGLSSQR 621
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+L+++ + +R I+ + + P+ + R+ N+RIE
Sbjct: 622 LQNTLDFLLRQRIGVDR-ITTKDYKNSKPV----SIKDRRRNRRIEF 663
>gi|145297473|ref|YP_001140314.1| LafU [Aeromonas salmonicida subsp. salmonicida A449]
gi|22758827|gb|AAN04225.1| LafU [Aeromonas salmonicida]
gi|142850245|gb|ABO88566.1| LafU [Aeromonas salmonicida subsp. salmonicida A449]
Length = 315
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 56/158 (35%), Gaps = 15/158 (9%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLE 89
+ GS D+ + + ++LQ + G I + +
Sbjct: 135 GEAQMKQLAGFIGSLADQMQAKNNLELQ-----LVPQGLRILIRDDDEREMYSRGSARIS 189
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL---KNNLLISQERADVIKSYLIQRGV 146
F ML +A I + + + I HTDS +N +S +RA + + L+ G+
Sbjct: 190 PFFRHMLMALAPIFQRVEN-RVMISGHTDSTPFAGDNYSNWELSSDRAMMARRVLLAGGM 248
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGR-QNNQRIEIQIF 183
R V + +T R N+RIE+ +
Sbjct: 249 PPERVGQVVAMSDTML---ENTADPRGSENRRIELLVM 283
>gi|206602384|gb|EDZ38865.1| Conserved hypothetical protein [Leptospirillum sp. Group II '5-way
CG']
Length = 238
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 60/202 (29%), Gaps = 26/202 (12%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + ++ + + + + K D E EF+ L G
Sbjct: 23 LMTGLMMIFLLVAVSYMTDMELANYRIKRIAVRYNEVHDALYRD-LEKEFKNDLPRWGAE 81
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI---LNKFPSTV-----IAIQSH 116
+ R I P + L+ +F +L + P I I+ H
Sbjct: 82 IHRD-LSIRFREPDVLFATGSDALKPRFQAILNDFFPRYVAILSSPKYRKSISEIRIEGH 140
Query: 117 TDSIGT----------LKNNLLISQERADVIKSYLIQ------RGVSSNRFISVRGFAYK 160
T S N+ +SQ R +Y++ + ++ G +
Sbjct: 141 TSSFWNRSVSASSDDAYFRNMALSQARTRTTLAYVLGLPSVSGKKGWLKGLLTANGLSSS 200
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
I + + +QR+E ++
Sbjct: 201 RLIYDKNGEEDPALSQRVEFRV 222
>gi|270293956|ref|ZP_06200158.1| major outer membrane protein OmpA [Bacteroides sp. D20]
gi|270275423|gb|EFA21283.1| major outer membrane protein OmpA [Bacteroides sp. D20]
Length = 374
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 46/141 (32%), Gaps = 9/141 (6%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM------QLQDTGIVVSRIGDMITCYIPVH 79
KK + D D +N + L + V + + P
Sbjct: 217 KKFVKASNIDEDAINAEINRYRSELAQAQADLANCKNALANAKPEVKEVTKEVEVAGPRA 276
Query: 80 VSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVI 137
+ F L+ +QL A IL P + + D G+ N +S++RA V+
Sbjct: 277 IFFKIGSARLDDYGKVNIQLAAKILKANPDRKYKVAGYCDKATGSASWNQKLSEKRAQVV 336
Query: 138 KSYLIQRGVSSNRFISVRGFA 158
LI S + + GF
Sbjct: 337 YDALIAE-GVSKDQLELVGFG 356
>gi|163735541|ref|ZP_02142973.1| chemotaxis protein MotB, putative [Roseobacter litoralis Och 149]
gi|161391161|gb|EDQ15498.1| chemotaxis protein MotB, putative [Roseobacter litoralis Och 149]
Length = 279
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 54/182 (29%), Gaps = 20/182 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG-----------IVVSR 67
+ +K + D SS ++ + + + G IV
Sbjct: 99 ATSQHATRKKAASGESGNDSDGGEQDSSDEELQALIEELMGRGGESTVMENALEHIVTRI 158
Query: 68 IGDMITCYI---PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-- 122
+ + + F + L + + + IAI +H S
Sbjct: 159 TDEGLVIELFALDGQPLFQPNSDDPTPLMTQLVELVASVAFAATNNIAIGAHVPSRPIVV 218
Query: 123 -LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S +RA + L + G+ R V G A + P+ N N R+EI
Sbjct: 219 AQNPVWDVSTDRATRTRLMLQENGLEPERMHRVTGHADREPVHLNPMAT---RNSRVEIV 275
Query: 182 IF 183
+
Sbjct: 276 LL 277
>gi|59889800|emb|CAH19156.1| Lateral flagellar motor protein B (MotB-like) [Escherichia coli]
gi|284920064|emb|CBG33121.1| lateral flagellar motor protein B (MotB-like) [Escherichia coli
042]
Length = 307
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 62/180 (34%), Gaps = 10/180 (5%)
Query: 13 TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
T++ ++ + V + G + + + + + +
Sbjct: 95 ATVAAPEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGL 154
Query: 73 TCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN--- 125
I + + F +L +A + + I I HTD++ N
Sbjct: 155 RVLIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNKIIITGHTDAMAYKNNIYN 213
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA + L + G+ ++ + V A + +D + + N+RIEI + +
Sbjct: 214 NWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQS--AGNRRIEIMVLTK 271
>gi|237741814|ref|ZP_04572295.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
gi|229429462|gb|EEO39674.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
Length = 233
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 59/198 (29%), Gaps = 22/198 (11%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+S M + + K H S EF+ L+ +
Sbjct: 17 LMSALTMIFLFISVTYMLQVNKQKEHIEVIAKDFKNTKQSIYKDLNKEFEEDLKKWNAYI 76
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ----LIATIL-NKFPST--VIAIQSHTD 118
+ IT P V + F +L+ +L + I I+ HT
Sbjct: 77 DKDTLSITFKEPDVFFEVGSSEINDNFKVVLKDFFPRYIEMLYKNYKDEIEEIRIEGHTS 136
Query: 119 SIGT--------LKNNLLISQERADVIKSYLIQRGVSSNRFI------SVRGFAYKYPID 164
S N+ +SQ RA + Y + N + G +Y + I
Sbjct: 137 SEWNKDDDNLQAYFKNMSLSQARARSVLEYCMLLDSMENYRDFLIEKATANGLSYSHRII 196
Query: 165 TNDTKVGRQNNQRIEIQI 182
D K ++R+E +I
Sbjct: 197 -EDGKENYNKSRRVEFKI 213
>gi|17549629|ref|NP_522969.1| flagellar motor protein MotB [Ralstonia solanacearum GMI1000]
gi|17431883|emb|CAD18561.1| probable chemotaxis (motility protein b) transmembrane [Ralstonia
solanacearum GMI1000]
Length = 314
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 55/143 (38%), Gaps = 12/143 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + + + G+ + + + + ++ +L+ + LN
Sbjct: 137 MNQFKHQLLIDMTSEGLRIQIVDQQ-----NRPMFANASAEVQPYMRTILRELGVALNDV 191
Query: 107 PSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I++ HTD+ N +S +RA+ + LI G+ + V G P
Sbjct: 192 PN-PISLSGHTDATQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVP 250
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
+D T N+RI I +
Sbjct: 251 LD--KTDAFNPINRRISIVVLNN 271
>gi|299069796|emb|CBJ41076.1| Chemotaxis protein motB (Motility protein B), flagellar motor
protein [Ralstonia solanacearum CMR15]
Length = 314
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 55/143 (38%), Gaps = 12/143 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + + + G+ + + + + ++ +L+ + LN
Sbjct: 137 MNQFKHQLLIDMTSEGLRIQIVDQQ-----NRPMFANASAEVQPYMRTILRELGVALNDV 191
Query: 107 PSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I++ HTD+ N +S +RA+ + LI G+ + V G P
Sbjct: 192 PN-PISLSGHTDATQYATQNGYSNWELSADRANASRRELIAGGMQPEKVARVVGLEASVP 250
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
+D T N+RI I +
Sbjct: 251 LD--KTDAFNPINRRISIVVLNN 271
>gi|83643026|ref|YP_431461.1| phosphate ABC transporter periplasmic protein [Hahella chejuensis
KCTC 2396]
gi|83631069|gb|ABC27036.1| ABC-type phosphate transport system, periplasmic component [Hahella
chejuensis KCTC 2396]
Length = 460
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 52/158 (32%), Gaps = 9/158 (5%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
+ + ++ A + + ++ ++R + +T
Sbjct: 305 THSATGQDIVANSGFVSQNIMEVA-PKLDNSVPESFRQLTRNYNRLTVNFR---FAAGRS 360
Query: 87 FLEKKFLPMLQLIATILNKFPS--TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L+ K L+ + L + T + + D G ++S+ RA + L +R
Sbjct: 361 KLDNKAHRDLERLLEYLRESSRSPTDLMLIGFADKSGDELRAQMVSELRATAVSRALKER 420
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
G +V G+ + + G N R+E+ +
Sbjct: 421 GAEVK---AVTGYGQYKTVGATGGEHGASRNGRVEVWV 455
>gi|270293963|ref|ZP_06200165.1| major outer membrane protein OmpA [Bacteroides sp. D20]
gi|270275430|gb|EFA21290.1| major outer membrane protein OmpA [Bacteroides sp. D20]
Length = 355
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 42/130 (32%), Gaps = 9/130 (6%)
Query: 37 DIVNKRFGSSLDKAEDEFQM------QLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLE 89
D VN + L + V + + P + F L+
Sbjct: 209 DAVNAEINRYRSELAQAQADLANCKNALANAKPEVKEVTKEVEVAGPRAIFFKIGSARLD 268
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSS 148
++L A IL P + + D G+ N +S++RA V+ LI +
Sbjct: 269 DYGKVNIELAAKILKANPDKKYKVAGYADKATGSTSWNQKLSEKRAQVVYDALIAQ-GVD 327
Query: 149 NRFISVRGFA 158
+ + GF
Sbjct: 328 KDQLELVGFG 337
>gi|189463696|ref|ZP_03012481.1| hypothetical protein BACINT_00027 [Bacteroides intestinalis DSM
17393]
gi|189438646|gb|EDV07631.1| hypothetical protein BACINT_00027 [Bacteroides intestinalis DSM
17393]
Length = 397
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 42/122 (34%), Gaps = 4/122 (3%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT---CYIPVHVSFVSEVFLEKKFLPMLQ 97
G+ + ++ V+ ++ + L + + L
Sbjct: 256 AAMGAQNAQLKNALIQAQNQPVAEVTETEVIVPDPDIAPRTVFFTIGSAELSPREIMNLS 315
Query: 98 LIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A + +FP+ + + DS GT N +S +RA +K L++ + +++
Sbjct: 316 YLAEQMKQFPNVTYTVNGYADSATGTPAFNKELSLKRAQAVKDALVKNYGIAADRLNIEA 375
Query: 157 FA 158
Sbjct: 376 GG 377
>gi|255011749|ref|ZP_05283875.1| putative major outer membrane protein [Bacteroides fragilis 3_1_12]
Length = 390
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 7/121 (5%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMIT------CYIPVHVSFVSEVFLEKKFLPMLQL 98
+ + A Q QL D + L + L
Sbjct: 249 NEMAAANQSLQQQLVDAQNQPVAEVAEQVVVTDANIAPRTVFFTIGSSELSPREEMNLSY 308
Query: 99 IATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A + +FP T + + DS GT N +SQ+RA + + L+++ + + V
Sbjct: 309 LAAKMKEFPDTQYTVYGYADSATGTPAFNKELSQKRAQAVVNALVKKYGVDSSRLKVDAG 368
Query: 158 A 158
Sbjct: 369 G 369
>gi|218676259|ref|YP_002395078.1| Outer membrane protein [Vibrio splendidus LGP32]
gi|218324527|emb|CAV26009.1| Outer membrane protein [Vibrio splendidus LGP32]
Length = 188
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 18/132 (13%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-------------LEKKFLPMLQLIATILNKFPS-TV 110
++R ++I V F + L++ +L L+ +
Sbjct: 59 LNRESEVIQIAAQDDVCFYDKATQSLVLNYPTNVYLLDENHKQVL---GQYLSLVGDKSK 115
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I I+ H DS+G+ N +S RA + SYL + NR + + PI
Sbjct: 116 IYIEGHADSLGSKSYNKALSSRRAGQVASYLKKDLHQGNRIVEYA-YGESAPICKVTDNK 174
Query: 171 GRQNNQRIEIQI 182
N+R+ I +
Sbjct: 175 ATGCNRRVVITV 186
>gi|86144308|ref|ZP_01062640.1| hypothetical protein MED222_07863 [Vibrio sp. MED222]
gi|85837207|gb|EAQ55319.1| hypothetical protein MED222_07863 [Vibrio sp. MED222]
Length = 182
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 18/132 (13%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVF-------------LEKKFLPMLQLIATILNKFPS-TV 110
++R ++I V F + L++ +L L+ +
Sbjct: 53 LNRESEVIQIAAQDDVCFYDKATQSLVLNYPTNVYLLDENHKQVL---GQYLSLVGDKSK 109
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
I I+ H DS+G+ N +S RA + SYL + NR + + PI
Sbjct: 110 IYIEGHADSLGSKSYNKALSSRRAGQVASYLKKDLHQGNRIVEYA-YGESAPICKVTDNK 168
Query: 171 GRQNNQRIEIQI 182
N+R+ I +
Sbjct: 169 ATGCNRRVVITV 180
>gi|15805563|ref|NP_294259.1| hypothetical protein DR_0536 [Deinococcus radiodurans R1]
gi|6458233|gb|AAF10120.1|AE001912_5 hypothetical protein DR_0536 [Deinococcus radiodurans R1]
Length = 201
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 11/181 (6%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L L ++ I G + ++ +V + L ++
Sbjct: 21 LNLIFVLIFFIGGILAVGQAGWDQVKYRKAQELVVAAVRRAPLSVRPQLLSPVQRNDPPG 80
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST--VIAIQSHTD-SIG 121
R + ++ L + L A +L I I+ HT S
Sbjct: 81 AQR-----WVFRSENMFVGESAVLTPEGETALVDFAQVLRSQKKNWKRIRIEGHTQTSRP 135
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S RA + + RG S ++V + P + + N+R+EI
Sbjct: 136 NTPERWDLSATRASAVAAAFYLRGGISPNRLAVAARGGQTPFNGHKFA---PQNERVEIV 192
Query: 182 I 182
+
Sbjct: 193 V 193
>gi|266620939|ref|ZP_06113874.1| extracellular solute-binding protein, family 1 [Clostridium
hathewayi DSM 13479]
gi|288867418|gb|EFC99716.1| extracellular solute-binding protein, family 1 [Clostridium
hathewayi DSM 13479]
Length = 478
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 36/127 (28%), Gaps = 8/127 (6%)
Query: 1 MIKELGLSMFIMT----TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K L + +SGC +++ + + + + + +
Sbjct: 1 MKKRLFAAALSAAMVGTLLSGCSISTTSTPESDASGTTAAGETASAAQETTAGQDLKGRE 60
Query: 57 QLQD--TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ-LIATILNKFPSTVIAI 113
++ G M + S + L +F P + ++T L I +
Sbjct: 61 EITLWFWGAEPYAQEAMQRILADKYNSSQDQYKLSIEFRPSVDTDMSTALAANQGPDI-V 119
Query: 114 QSHTDSI 120
S
Sbjct: 120 YGSGPSF 126
>gi|167374415|gb|ABZ79137.1| outer membrane protein [Riemerella anatipestifer]
Length = 338
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 16/167 (9%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
SGC + V + + K + E+
Sbjct: 185 SGCPCPDTDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGA-------------- 230
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ ++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 231 LQGIFFHFNKSSIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAA 290
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ S + +G + + R ++++ ++
Sbjct: 291 SVVA-ALEARGVSPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 336
>gi|53715321|ref|YP_101313.1| major outer membrane protein OmpA [Bacteroides fragilis YCH46]
gi|60683254|ref|YP_213398.1| putative major outer membrane protein [Bacteroides fragilis NCTC
9343]
gi|253567211|ref|ZP_04844661.1| major outer membrane protein OmpA [Bacteroides sp. 3_2_5]
gi|265767807|ref|ZP_06095339.1| major outer membrane protein OmpA [Bacteroides sp. 2_1_16]
gi|13446379|gb|AAK20932.1| major outer membrane protein OmpA [Bacteroides fragilis]
gi|52218186|dbj|BAD50779.1| major outer membrane protein OmpA [Bacteroides fragilis YCH46]
gi|60494688|emb|CAH09489.1| putative major outer membrane protein [Bacteroides fragilis NCTC
9343]
gi|251944042|gb|EES84561.1| major outer membrane protein OmpA [Bacteroides sp. 3_2_5]
gi|263252479|gb|EEZ24007.1| major outer membrane protein OmpA [Bacteroides sp. 2_1_16]
gi|301164773|emb|CBW24332.1| putative major outer membrane protein [Bacteroides fragilis 638R]
Length = 395
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 7/121 (5%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMIT------CYIPVHVSFVSEVFLEKKFLPMLQL 98
+ + A Q QL D + L + L
Sbjct: 254 NDMAAANQSLQQQLVDAQNQPVAEVAEQVVVTDANIAPRTVFFTIGSSELSPREEMNLSY 313
Query: 99 IATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A + +FP T + + DS GT N +SQ+RA + + L+++ + + V
Sbjct: 314 LAAKMKEFPDTQYTVYGYADSATGTPAFNKELSQKRAQAVVNALVKKYGVDSSRLKVDAG 373
Query: 158 A 158
Sbjct: 374 G 374
>gi|313149586|ref|ZP_07811779.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313138353|gb|EFR55713.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 395
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 7/121 (5%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMIT------CYIPVHVSFVSEVFLEKKFLPMLQL 98
+ + A Q QL D + L + L
Sbjct: 254 NEMAAANQSLQQQLVDAQNQPVAEVAEQVVVTDANIAPRTVFFTIGSSELSPREEMNLSY 313
Query: 99 IATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+A + +FP T + + DS GT N +SQ+RA + + L+++ + + V
Sbjct: 314 LAAKMKEFPDTQYTVYGYADSATGTPAFNKELSQKRAQAVVNALVKKYGVDSSRLKVDAG 373
Query: 158 A 158
Sbjct: 374 G 374
>gi|148252154|ref|YP_001236739.1| hypothetical protein BBta_0555 [Bradyrhizobium sp. BTAi1]
gi|146404327|gb|ABQ32833.1| hypothetical protein BBta_0555 [Bradyrhizobium sp. BTAi1]
Length = 212
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ + +K L +Q + L + + HTD+ G N +S+ RAD
Sbjct: 99 EITFDYNSANISQKSLASVQALGRALTSPDLKGSTFVVAGHTDAAGGDAYNQDLSERRAD 158
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
IK YL+++ + + G+ D + + N+R+++
Sbjct: 159 SIKRYLVEKFGIAGADLVTVGYGKSKLKDPSQPLA--EVNRRVQVV 202
>gi|254446133|ref|ZP_05059609.1| OmpA family protein [Verrucomicrobiae bacterium DG1235]
gi|198260441|gb|EDY84749.1| OmpA family protein [Verrucomicrobiae bacterium DG1235]
Length = 163
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 33/105 (31%), Gaps = 2/105 (1%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ + L +A+ L I ++ H D GT + NL + RA ++
Sbjct: 60 VLFQFDSSSIAPSERAKLDQVASFLKGADRVGIVLEGHCDWRGTQEYNLALGDRRAKSVE 119
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ + + + + +++E+ I
Sbjct: 120 N-YLSTLGVNASVMQTLSQGDLQ-ATEGASSAQMAKERKVELLII 162
>gi|300955691|ref|ZP_07168041.1| OmpA family protein [Escherichia coli MS 175-1]
gi|2494512|sp|Q47154|MBHA_ECOLI RecName: Full=Putative protein mbhA
gi|984586|dbj|BAA07592.1| MbhA [Escherichia coli W3110]
gi|1552798|gb|AAB08650.1| MbhA [Escherichia coli]
gi|300317442|gb|EFJ67226.1| OmpA family protein [Escherichia coli MS 175-1]
Length = 211
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 46 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 99
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D+ +
Sbjct: 100 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKN 159
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 160 PQS--AGNRRIEIMVLTK 175
>gi|71908539|ref|YP_286126.1| hypothetical protein Daro_2926 [Dechloromonas aromatica RCB]
gi|71848160|gb|AAZ47656.1| hypothetical protein Daro_2926 [Dechloromonas aromatica RCB]
Length = 177
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 44/146 (30%), Gaps = 5/146 (3%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
+ I+ +S CG +++ + + + I +
Sbjct: 8 IAILLLLSACGTTPPAATNAPSQNLATSEVAPPNPPDAAREEAPPLIATSRQDHIRSEK- 66
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+E+ L++ L A L P TV+ I++ + G+ L
Sbjct: 67 ----KLSKRYISFAPNELSLDEANRKKLHGYAQELKNRPKTVVVIKAFSYGAGSRAYTLA 122
Query: 129 ISQERADVIKSYLIQRGVSSNRFISV 154
+ + + L + G+ R V
Sbjct: 123 ALENQLRAVSGALQESGIQKTRIRQV 148
>gi|218703545|ref|YP_002411064.1| hypothetical protein ECUMN_0293 [Escherichia coli UMN026]
gi|300899473|ref|ZP_07117721.1| OmpA family protein [Escherichia coli MS 198-1]
gi|218430642|emb|CAR11508.1| flagellar system protein [Escherichia coli UMN026]
gi|300356952|gb|EFJ72822.1| OmpA family protein [Escherichia coli MS 198-1]
Length = 307
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 142 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 195
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 196 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 255
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 256 PQS--AGNRRIEIMVLTK 271
>gi|90423959|ref|YP_532329.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
gi|90105973|gb|ABD88010.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 283
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 53/150 (35%), Gaps = 19/150 (12%)
Query: 50 AEDEFQMQLQD--------TGIVVSRIGDMITCYI---PVHVSFVSEVFLEKKFLPML-Q 97
A + LQ+ ++ + I F L + +L +
Sbjct: 125 ASASLRQALQEMPEITEISKNVMFEETPQGLNLQIVDQEGRPMFPDGSPLPYERTMLLVR 184
Query: 98 LIATILNKFPSTVIAIQSHTDSIG----TLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+A L + I+I HT S G + ++S +RA+ ++ L G+ S+ +
Sbjct: 185 KLAAPLRAT-ALRISIVGHTSSTGAPGRDDDDAFVLSWQRANTVRQILKGEGLPSSHVFA 243
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
V G A P+ N+R+ I +
Sbjct: 244 VTGKADSEPLFP--DAPLLAANRRVTITLM 271
>gi|300936146|ref|ZP_07151085.1| OmpA family protein [Escherichia coli MS 21-1]
gi|300458724|gb|EFK22217.1| OmpA family protein [Escherichia coli MS 21-1]
Length = 307
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 142 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 195
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 196 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 255
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 256 PQS--AGNRRIEIMVLTK 271
>gi|134095750|ref|YP_001100825.1| putative OmpA family protein [Herminiimonas arsenicoxydans]
gi|133739653|emb|CAL62704.1| Putative outer membrane protein OmpA [Herminiimonas arsenicoxydans]
Length = 225
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 32/222 (14%), Positives = 70/222 (31%), Gaps = 42/222 (18%)
Query: 1 MIKELGLSMFIMTT---ISGCGLASREK----------------------------KKVF 29
MI +L L + + + +
Sbjct: 1 MINKLALVLLVGVAPSYAAAQSSTDIQAPSNHSYNQDGRGTITRSDYGLCWRSGFWTPDD 60
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
D + + + + + + + Q + + ++ ++ L
Sbjct: 61 AVAGCDGALASPIPNPTAPEMANSLEKERQSMPLAAKPLCNVTLALASDQTFAFNKAVLN 120
Query: 90 KKFLPMLQ-LIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
K + + IL + I I HTD +G ++N ++S++RA + YL +GVS
Sbjct: 121 KAAKQQIDQKVLPILAECKGIDGITITGHTDHLGASRSNQILSEKRAASVAGYLKTKGVS 180
Query: 148 SNRFISVRGFAYKYPIDTNDTK-------VGRQNNQRIEIQI 182
+ ++V G + D K N+R+ I++
Sbjct: 181 TK--MNVLGAGETQGVKLCDEKLPHGKLIACLAPNRRVLIEV 220
>gi|126417355|gb|ABO13880.1| MotB [Ralstonia solanacearum]
Length = 314
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 55/143 (38%), Gaps = 12/143 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + + + G+ + + + + ++ +L+ + LN
Sbjct: 137 MNQFKHQLLIDMTSEGLRIQIVDQQ-----NRPMFANASAEVQPYLRTILRELGAALNDV 191
Query: 107 PSTVIAIQSHTDSIGTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ I++ HTD+ N +S +RA+ + LI G+ + V G P
Sbjct: 192 PN-PISLSGHTDATQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVP 250
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
+D T N+RI I +
Sbjct: 251 LD--KTDAFNPINRRISIVVLNN 271
>gi|312964712|ref|ZP_07778963.1| lateral flagellar motor protein B [Escherichia coli 2362-75]
gi|312290733|gb|EFR18611.1| lateral flagellar motor protein B [Escherichia coli 2362-75]
Length = 254
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 89 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 142
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 143 IIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 202
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 203 PQS--AGNRRIEIMVLTK 218
>gi|213963104|ref|ZP_03391362.1| putative immunoreactive 43 kDa antigen PG32 [Capnocytophaga
sputigena Capno]
gi|213954188|gb|EEB65512.1| putative immunoreactive 43 kDa antigen PG32 [Capnocytophaga
sputigena Capno]
Length = 419
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLI 99
+ +DE + VV ++ + V+F ++ ++ LP ++ I
Sbjct: 281 ADNQKQIKNLQDELEAARNKKPEVVEKVVTKNKKTLESVVTFRVAKSTIDASQLPNVERI 340
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
A+ LNK+ + ++I+ + G L+ N ++ RA+ +K+ L++R S I G
Sbjct: 341 ASYLNKYRNAKVSIKGYASPEGDLEKNKKLATARAEAVKTLLVKRYKISADRIEAEGNG 399
>gi|170739243|ref|YP_001767898.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
gi|168193517|gb|ACA15464.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
Length = 210
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 57/187 (30%), Gaps = 20/187 (10%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIV-----------NKRFGSSLDKAEDE-- 53
L + SG A + + + LD +
Sbjct: 15 LVALALLLGSGGARAQTVTEDDIVRALMPRPQTRSLTLVVPDRGGREEQVFLDSLRNRSS 74
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KFPSTVI 111
+D +S I IP + + L + + L + + I
Sbjct: 75 LSAAERDRLAALSSDKQSIALDIP---FAYNSSKIGHGALAQVSALGASLARPELRDSTI 131
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
I HTD G+ + N +S+ RA +K Y+++ + + GF + + +
Sbjct: 132 LIVGHTDGKGSDRGNQRLSERRARAVKDYIVRHYGVAAGNLIGVGFGKSHLKEAANPYA- 190
Query: 172 RQNNQRI 178
N+R+
Sbjct: 191 -AANRRV 196
>gi|86160426|ref|YP_467211.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85776937|gb|ABC83774.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 359
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
R+ + L++ L + L P + +++ D+
Sbjct: 242 RRLAAGERFVLEDAAFAGRTADLQRDGG--LADLVVALAAVPGVAVRVEAFVDATADAVA 299
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ ++Q AD L + GV++ R ++ G+ + P+ N T GR N+R+EI
Sbjct: 300 DQRLTQAMADAATGRLRELGVAAAR-LTGVGYGGERPLLPNFTVRGRTANRRLEIV 354
>gi|300787647|ref|YP_003767938.1| OmpA-OmpF porin, OOP family [Amycolatopsis mediterranei U32]
gi|299797161|gb|ADJ47536.1| OmpA-OmpF porin, OOP family [Amycolatopsis mediterranei U32]
Length = 410
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + L +L+ TIL P I HT + G + L+S +RA+ +
Sbjct: 294 QALFDPNSPVLAPAAEAVLRPYVTILQG-PGAHATITGHTATWGPIPGRDLLSVQRAEAV 352
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR------QNNQRIEI-QIFP 184
++Y I++ V + RG + + G Q N+RI + + P
Sbjct: 353 RNYFIEQHVPAEALAPARGVGSSEQVVNDIDPAGNLIEQAAQRNRRIVLDIVTP 406
>gi|293408386|ref|ZP_06652225.1| conserved hypothetical protein [Escherichia coli B354]
gi|291471564|gb|EFF14047.1| conserved hypothetical protein [Escherichia coli B354]
Length = 307
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 142 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 195
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 196 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 255
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 256 PQS--AGNRRIEIMVLTK 271
>gi|215485380|ref|YP_002327811.1| hypothetical protein E2348C_0225 [Escherichia coli O127:H6 str.
E2348/69]
gi|215263452|emb|CAS07773.1| flagellar system protein MbhA [Escherichia coli O127:H6 str.
E2348/69]
Length = 261
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 96 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 149
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 150 IIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 209
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 210 PQS--AGNRRIEIMVLTK 225
>gi|16265946|gb|AAL16679.1|AF358690_1 flagellar motor rotation protein [Helicobacter hepaticus]
Length = 98
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 8/99 (8%)
Query: 82 FVSEVFLEKKFLPM-LQLIATILNKFPST-VIAIQSHTDSIG-----TLKNNLLISQERA 134
+ + + LQ ++ I+ K P I ++ +TD+ K+N +S R+
Sbjct: 1 DSGSAEINNSDVFLYLQRMSAIIKKLPDYVKIDVRGYTDNAPLPVGSRYKDNYELSSARS 60
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ LI + S IS G+ + ND+ + R
Sbjct: 61 LSVMKNLI-KNGISPERISFSGYGEHQAVAPNDSALNRA 98
>gi|309786020|ref|ZP_07680649.1| lateral flagellar motor protein B [Shigella dysenteriae 1617]
gi|308926131|gb|EFP71609.1| lateral flagellar motor protein B [Shigella dysenteriae 1617]
Length = 307
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 142 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 195
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 196 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 255
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 256 PQS--AGNRRIEIMVLTK 271
>gi|86131085|ref|ZP_01049684.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85818496|gb|EAQ39656.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 278
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L L+ T L I+I + D GT N +SQERA+ I
Sbjct: 12 ETFFETDKSNLVAIENAKLERFITSLPLDKIEDISIYGYCDDRGTDAYNNWLSQERANTI 71
Query: 138 KSYLIQRGVSSNRFISVRGFAY---KYPIDTNDTKVGRQNNQRIEIQI 182
K + RG++ + + G +D ++V R N+++EI +
Sbjct: 72 KQKFVDRGIADSIIKNSDGKGELLLTR-LDDVGSEVQRTLNRKVEIIV 118
>gi|323976251|gb|EGB71344.1| OmpA family protein [Escherichia coli TW10509]
gi|327254574|gb|EGE66190.1| lateral flagellar motor protein B [Escherichia coli STEC_7v]
Length = 307
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 55/138 (39%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 142 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 195
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L G+ ++ + V A + +D +
Sbjct: 196 IIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEDAGMPEDKVMQVSAMADQMLLDAKN 255
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 256 PQS--AGNRRIEIMVLTK 271
>gi|301164479|emb|CBW24037.1| putative membrane protein [Bacteroides fragilis 638R]
Length = 445
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 48/143 (33%), Gaps = 8/143 (5%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITC----YIPVHVSFVSEVFLEKK-FLPMLQLI 99
+ + MQLQ VV +P +L + L I
Sbjct: 304 ERMKREIASLNMQLQQAHTVVKEKTGSDPILGFNELPPVYFKRGSAYLNVALYKNELCRI 363
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
L K+P + + H D G N IS +RA+ + +++ + I+V+G
Sbjct: 364 VQTLKKYPELKVILSGHADHTGNPDINQKISLQRAE-ALAAYLEKKGIDGKRIAVKGECI 422
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
+ +R+ ++I
Sbjct: 423 DMLTSDPNNYSVLA--RRVIVEI 443
>gi|253566150|ref|ZP_04843604.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265766901|ref|ZP_06094730.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|251945254|gb|EES85692.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263253278|gb|EEZ24754.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 435
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 48/143 (33%), Gaps = 8/143 (5%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITC----YIPVHVSFVSEVFLEKK-FLPMLQLI 99
+ + MQLQ VV +P +L + L I
Sbjct: 294 ERMKREIASLNMQLQQAHTVVKEKTGSDPILGFNELPPVYFKRGSAYLNVALYKNELCRI 353
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
L K+P + + H D G N IS +RA+ + +++ + I+V+G
Sbjct: 354 VQTLKKYPELKVILSGHADHTGNPDINQKISLQRAE-ALAAYLEKKGIDGKRIAVKGECI 412
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
+ +R+ ++I
Sbjct: 413 DMLTSDPNNYSVLA--RRVIVEI 433
>gi|148974875|ref|ZP_01811855.1| outer membrane protein [Vibrionales bacterium SWAT-3]
gi|145965384|gb|EDK30633.1| outer membrane protein [Vibrionales bacterium SWAT-3]
Length = 180
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 54/141 (38%), Gaps = 17/141 (12%)
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-------------LEKKFLPMLQLIAT 101
+ ++ + +++ ++I V F + L++ +L+ +
Sbjct: 42 RDEIPQNEL-LNKESEVIQIAAQDDVCFYDKATQSLVLNYPINVYKLDESHKQVLEQYLS 100
Query: 102 ILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
++ + I I+ H DS+G+ N +S RA + SYL + +R + +
Sbjct: 101 LV--DDKSKIFIEGHADSLGSESYNKALSSRRAGQVTSYLKEDLRQGSRIVEYA-YGESA 157
Query: 162 PIDTNDTKVGRQNNQRIEIQI 182
PI N+R+ I +
Sbjct: 158 PICKAADNKVTGCNRRVVITV 178
>gi|60683014|ref|YP_213158.1| hypothetical protein BF3556 [Bacteroides fragilis NCTC 9343]
gi|60494448|emb|CAH09244.1| putative membrane protein [Bacteroides fragilis NCTC 9343]
Length = 445
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 48/143 (33%), Gaps = 8/143 (5%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITC----YIPVHVSFVSEVFLEKK-FLPMLQLI 99
+ + MQLQ VV +P +L + L I
Sbjct: 304 ERMKREIASLNMQLQQAHTVVKEKTGSDPILGFNELPPVYFKRGSAYLNVALYKNELCRI 363
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
L K+P + + H D G N IS +RA+ + +++ + I+V+G
Sbjct: 364 VQTLKKYPELKVILSGHADHTGNPDINQKISLQRAE-ALAAYLEKKGIDGKRIAVKGECI 422
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
+ +R+ ++I
Sbjct: 423 DMLTSDPNNYSVLA--RRVIVEI 443
>gi|53715052|ref|YP_101044.1| putative outer membrane protein [Bacteroides fragilis YCH46]
gi|52217917|dbj|BAD50510.1| putative outer membrane protein [Bacteroides fragilis YCH46]
Length = 442
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 48/143 (33%), Gaps = 8/143 (5%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITC----YIPVHVSFVSEVFLEKK-FLPMLQLI 99
+ + MQLQ VV +P +L + L I
Sbjct: 301 ERMKREIASLNMQLQQAHTVVKEKTGSDPILGFNELPPVYFKRGSAYLNVALYKNELCRI 360
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
L K+P + + H D G N IS +RA+ + +++ + I+V+G
Sbjct: 361 VQTLKKYPELKVILSGHADHTGNPDINQKISLQRAE-ALAAYLEKKGIDGKRIAVKGECI 419
Query: 160 KYPIDTNDTKVGRQNNQRIEIQI 182
+ +R+ ++I
Sbjct: 420 DMLTSDPNNYSVLA--RRVIVEI 440
>gi|329962616|ref|ZP_08300564.1| OmpA family protein [Bacteroides fluxus YIT 12057]
gi|328529647|gb|EGF56545.1| OmpA family protein [Bacteroides fluxus YIT 12057]
Length = 397
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ N++ ++L A+++ ++ +T ++++ + + +
Sbjct: 256 AELGAANQQLQNALTAAQNQPVEEVAETEVILTDPD----IAPRTVFFNIGSAEVSAREA 311
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L +A + +FP+ + + DS GT N +S +RA + L+++ +
Sbjct: 312 MNLSYLADQMKQFPNATYTVNGYADSATGTPAFNKELSLKRAQAVVDVLVKQYGIPADRL 371
Query: 153 SVRGFA 158
V
Sbjct: 372 KVDANG 377
>gi|293403376|ref|ZP_06647467.1| hypothetical protein ECGG_04086 [Escherichia coli FVEC1412]
gi|298378988|ref|ZP_06988869.1| chemotaxis protein MotB [Escherichia coli FVEC1302]
gi|291429229|gb|EFF02249.1| hypothetical protein ECGG_04086 [Escherichia coli FVEC1412]
gi|298280101|gb|EFI21605.1| chemotaxis protein MotB [Escherichia coli FVEC1302]
Length = 318
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 153 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 206
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 207 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 266
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 267 PQS--AGNRRIEIMVLTK 282
>gi|170021342|ref|YP_001726296.1| hypothetical protein EcolC_3350 [Escherichia coli ATCC 8739]
gi|188495907|ref|ZP_03003177.1| lateral flagellar motor protein B [Escherichia coli 53638]
gi|169756270|gb|ACA78969.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739]
gi|188491106|gb|EDU66209.1| lateral flagellar motor protein B [Escherichia coli 53638]
Length = 307
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 142 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 195
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 196 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 255
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 256 PQS--AGNRRIEIMVLTK 271
>gi|193068683|ref|ZP_03049644.1| putative chemotaxis protein [Escherichia coli E110019]
gi|192958046|gb|EDV88488.1| putative chemotaxis protein [Escherichia coli E110019]
Length = 256
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + + +
Sbjct: 91 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSLNN-K 144
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 145 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 204
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 205 PQS--AGNRRIEIMVLTK 220
>gi|146343730|ref|YP_001208778.1| hypothetical protein BRADO6977 [Bradyrhizobium sp. ORS278]
gi|146196536|emb|CAL80563.1| conserved hypothetical protein; putative OmpA-like transmembrane
domains [Bradyrhizobium sp. ORS278]
Length = 213
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 52/135 (38%), Gaps = 7/135 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN--KF 106
+A ++ V++ I I + + +K + +Q + L
Sbjct: 74 RATRSLSSAEREEIAAVAKTKPNIDLEIT---FDYNSANISQKSMASVQALGRALTSPDL 130
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ + HTD+ G N +S+ RAD IK YL+++ + + G+ D +
Sbjct: 131 KGSTFVLAGHTDAAGADAYNQDLSERRADSIKRYLVEKFGIAGSDLVTVGYGKSKLKDPS 190
Query: 167 DTKVGRQNNQRIEIQ 181
+ N+R+++
Sbjct: 191 QPLA--EVNRRVQVV 203
>gi|82775833|ref|YP_402180.1| hypothetical protein SDY_0484 [Shigella dysenteriae Sd197]
gi|81239981|gb|ABB60691.1| putative motility protein [Shigella dysenteriae Sd197]
Length = 259
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 94 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 147
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 148 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 207
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 208 PQS--AGNRRIEIMVLTK 223
>gi|110589616|gb|ABG77310.1| outer membrane protein A [Acinetobacter baumannii]
Length = 286
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 194 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 253
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVS 147
HTD+ G K N +S RA+ +KS L+
Sbjct: 254 GHTDNTGPRKLNERLSLARANSVKSALVNEYNV 286
>gi|330950600|gb|EGH50860.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae Cit 7]
Length = 34
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 5/31 (16%), Positives = 16/31 (51%)
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + + P+ T + + N+R+E++
Sbjct: 3 QLELVSYGEERPVATGNDEQSWAQNRRVELR 33
>gi|39935962|ref|NP_948238.1| chemotaxis protein MotB2 [Rhodopseudomonas palustris CGA009]
gi|39649816|emb|CAE28338.1| possible chemotaxis protein MotB2 [Rhodopseudomonas palustris
CGA009]
Length = 326
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 56/172 (32%), Gaps = 18/172 (10%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMITCYIPVH-- 79
+ + + + A + LQD +V + +
Sbjct: 149 ESGGSGSAASHAKAEREFALASASLRQALQDVPELAEMSKNVVFEETPVGLNLELTDQDG 208
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS---IGTLKNNLLISQERA 134
+ ++ ++ +A L S + I HT + + L +S RA
Sbjct: 209 RPMFPDGSAVPYERTRKLVARLAAPLRAT-SLRVIIVGHTAATVVQAGDDDPLSLSVNRA 267
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ ++ L Q G+ S++ +S+ G P+ + N+R+ I +
Sbjct: 268 NAVREVLKQEGLPSSQVLSLVGKGDGEPLFPDAPA--LAANRRVTITLMREN 317
>gi|317479876|ref|ZP_07938993.1| OmpA family protein [Bacteroides sp. 4_1_36]
gi|316903950|gb|EFV25787.1| OmpA family protein [Bacteroides sp. 4_1_36]
Length = 392
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 48/126 (38%), Gaps = 5/126 (3%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ N++ ++L A+++ ++ +T ++V + + +
Sbjct: 251 AEMGAANQQLQNALVAAQNQPVAEVTETEVIVPDPD----IAPRTVFFNIGSAEVSPREA 306
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L +A + +FP+ + + DS GT N +S +RA + L+++ +
Sbjct: 307 MNLSYLADQMKQFPNATYTVNGYADSATGTPAFNKELSLKRAQAVVDVLVKQYGIPADRL 366
Query: 153 SVRGFA 158
V
Sbjct: 367 KVDAGG 372
>gi|160890582|ref|ZP_02071585.1| hypothetical protein BACUNI_03025 [Bacteroides uniformis ATCC 8492]
gi|156859581|gb|EDO53012.1| hypothetical protein BACUNI_03025 [Bacteroides uniformis ATCC 8492]
Length = 392
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 48/126 (38%), Gaps = 5/126 (3%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ N++ ++L A+++ ++ +T ++V + + +
Sbjct: 251 AEMGAANQQLQNALVAAQNQPVAEVTETEVIVPDPD----IAPRTVFFNIGSAEVSPREA 306
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L +A + +FP+ + + DS GT N +S +RA + L+++ +
Sbjct: 307 MNLSYLADQMKQFPNATYTVNGYADSATGTPAFNKELSLKRAQAVVDVLVKQYGIPADRL 366
Query: 153 SVRGFA 158
V
Sbjct: 367 KVDAGG 372
>gi|323191390|gb|EFZ76652.1| lateral flagellar motor protein B [Escherichia coli RN587/1]
Length = 307
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 142 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 195
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 196 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 255
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 256 PQS--AGNRRIEIMVLTK 271
>gi|218552836|ref|YP_002385749.1| hypothetical protein ECIAI1_0271 [Escherichia coli IAI1]
gi|218693715|ref|YP_002401382.1| hypothetical protein EC55989_0255 [Escherichia coli 55989]
gi|218350447|emb|CAU96134.1| flagellar system protein [Escherichia coli 55989]
gi|218359604|emb|CAQ97145.1| flagellar system protein [Escherichia coli IAI1]
Length = 296
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 131 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKRLLVELAPVFDSL-DNK 184
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 185 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 244
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 245 PQS--AGNRRIEIMVLTK 260
>gi|332883362|gb|EGK03645.1| hypothetical protein HMPREF9456_01712 [Dysgonomonas mossii DSM
22836]
Length = 410
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 9/145 (6%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGI---VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
S + + + E ++ + + V V + LEK +
Sbjct: 267 GSKDSEISRLKQELAVKPEPQIVIEKTKEIKEQTEVLMNAVVVFHIGSAKLEKNQDINIY 326
Query: 98 LIATILNKFPSTVIAIQSHTD-SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
A L P + + + D S GT N +S++RA+ + + L++ S I+ +
Sbjct: 327 NAARYLKDNPQVNVIVTGYADKSTGTAAINQRLSEQRAEAVANVLVEEYGISRSRITTKA 386
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + D Q N+ +
Sbjct: 387 SGDREQLFPTD-----QWNRVVVFT 406
>gi|296534172|ref|ZP_06896663.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296265499|gb|EFH11633.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 157
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 53/140 (37%), Gaps = 7/140 (5%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + I +R G I V + ++ +L +AT+L +
Sbjct: 9 QSDPGLSDLARQLLIEQTREGLRIQLVDADGQPVFATGQAAPNQRGRALLLRVATVLARL 68
Query: 107 P---STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
P + G ++N +S ERA + LI+ G++ R +V G A + +
Sbjct: 69 PYGLDIAGHTDAAPFRGGGDRSNWELSAERAGAARRVLIEAGIAEERLRAVAGRADRDLL 128
Query: 164 DTNDTKVGRQNNQRIEIQIF 183
+ N+R+ I +
Sbjct: 129 SPDRPLD--AANRRVSILVL 146
>gi|323171084|gb|EFZ56733.1| lateral flagellar motor protein B [Escherichia coli LT-68]
Length = 307
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 142 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 195
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 196 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 255
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 256 PQS--AGNRRIEIMVLTK 271
>gi|206603884|gb|EDZ40364.1| Putative Outer membrane protein, OmpAfamily [Leptospirillum sp.
Group II '5-way CG']
Length = 521
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 17/149 (11%), Positives = 48/149 (32%), Gaps = 9/149 (6%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT----CYIPVHVSFVSEVFLEKKFLPML 96
G +A + G+++ + ++ + L ++ +L
Sbjct: 45 GTIGGFSPEARADPPANTPGEGMLLHQDKKLLRRIQDLSRQDLSFATGKADLNQRDRRIL 104
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+ A +L ++P I + H+D G N + +R ++ + I V
Sbjct: 105 REDAVLLKRYPKVEILLIGHSDERGNEIYNFRLGLDRGKSA-RQFLEDLGIAASRIHVVS 163
Query: 157 FAYK----YPIDTNDTKVGRQNNQRIEIQ 181
F + + + + ++ + +
Sbjct: 164 FGKRAIPGRLLCARHRESCWRRHRIVHVV 192
>gi|170681840|ref|YP_001742391.1| hypothetical protein EcSMS35_0284 [Escherichia coli SMS-3-5]
gi|170519558|gb|ACB17736.1| lateral flagellar motor protein B [Escherichia coli SMS-3-5]
Length = 307
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 142 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 195
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 196 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 255
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 256 PQS--AGNRRIEIMVLTK 271
>gi|308273452|emb|CBX30054.1| hypothetical protein N47_D28630 [uncultured Desulfobacterium sp.]
Length = 307
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 9/139 (6%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPMLQLIAT-ILNKF 106
EF + V++ G I F ++ ++ + +LQ+IA L K
Sbjct: 115 QTPEFNKFKDKITVTVTQEGMRIDLLEESEGLFFDIGKIHIKPDTVKLLQVIAKSHLAKL 174
Query: 107 PSTVIAIQSHTDSIGT---LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ I I+ +TD+ N +S ERA+ + L + G+ ++ + VRGFA +
Sbjct: 175 KNG-IIIEGYTDARPYVSSDYTNWELSTERANSARKVLEESGLRKDQILEVRGFADRKLR 233
Query: 164 DTNDTKVGRQNNQRIEIQI 182
+ +N+R+ I +
Sbjct: 234 LPDKPMD--FSNRRVSILL 250
>gi|306813285|ref|ZP_07447478.1| hypothetical protein ECNC101_15272 [Escherichia coli NC101]
gi|305854048|gb|EFM54487.1| hypothetical protein ECNC101_15272 [Escherichia coli NC101]
Length = 307
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 142 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 195
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 196 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 255
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 256 PQS--AGNRRIEIMVLTK 271
>gi|94502195|ref|ZP_01308691.1| OmpA family protein [Oceanobacter sp. RED65]
gi|94425675|gb|EAT10687.1| OmpA family protein [Oceanobacter sp. RED65]
Length = 143
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 11/111 (9%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ L K L L K + +++ TD++G N ++++RA
Sbjct: 38 LSAVQFDFDSSELTGKARMKLLAKMADLQKQGVSSVSVFGFTDNVGAEAYNKNLAKDRAS 97
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPI----DTNDTKVGRQNNQRIEIQI 182
+ +L GV N V G P+ N++ R N+R EI +
Sbjct: 98 TVARFLANGGVQIN---EVVG----KPLCCYLVDNESDQNRHVNRRAEIHL 141
>gi|331661626|ref|ZP_08362549.1| putative motility protein [Escherichia coli TA143]
gi|331060048|gb|EGI32012.1| putative motility protein [Escherichia coli TA143]
Length = 261
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 96 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 149
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 150 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 209
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 210 PQS--AGNRRIEIMVLTK 225
>gi|319641965|ref|ZP_07996632.1| outer membrane protein [Bacteroides sp. 3_1_40A]
gi|317386390|gb|EFV67302.1| outer membrane protein [Bacteroides sp. 3_1_40A]
Length = 378
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 48/107 (44%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ + Q V+ + + + ++ LP ++ IA+ +N+ P + +
Sbjct: 250 QKQLAECQSKKPVIETVIEKAKTLESIVTFRQGSSKVDVSQLPNVERIASYMNRHPESKV 309
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
I+ ++ G+++ N I+ RA+ +KS L+++ + I+ G
Sbjct: 310 VIKGYSSPEGSIEVNERIACARAESVKSILMKKYRIAASRITAEGQG 356
>gi|266619767|ref|ZP_06112702.1| putative bacterial extracellular solute-binding protein
[Clostridium hathewayi DSM 13479]
gi|288868671|gb|EFD00970.1| putative bacterial extracellular solute-binding protein
[Clostridium hathewayi DSM 13479]
Length = 465
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 33/119 (27%), Gaps = 20/119 (16%)
Query: 1 MIKELGLSMFIMT----TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K L S+ + ++GCG K ++ + K E E
Sbjct: 1 MKKRLLASVLCVAMAGTLLAGCGS------KDTAGSTSQASAAGTEAKTEAAKNEAEKTE 54
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQ 114
T + +T ++ + I N+ +P + IQ
Sbjct: 55 AAAGTEASIVTEPTELTFIFADG---------DEGAKASMNEIVNRFNEAYPDITVKIQ 104
>gi|311696161|gb|ADP99034.1| OmpA/MotB domain protein [marine bacterium HP15]
Length = 419
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 54/173 (31%), Gaps = 24/173 (13%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQ---LQDTGIVVSRIGDMITCYIPVHV------ 80
S+ + G +L + + + I V D T +
Sbjct: 254 TPGSDVPPLSAGLIGFALGQQGQALVAESGFISQNPIAVKPEFDESTPESFRRLTSNYHR 313
Query: 81 ------SFVSEVFLEKKFLPMLQLIATILNKFPSTV--IAIQSHTDSIGTLKNNLLISQE 132
L+ K LQ + LN+ + + + D+ +IS+
Sbjct: 314 LTVNFRFSEGRTKLDNKARRDLQRVQQYLNQNGRSADDLLLIGFADTQSHELRAQMISEL 373
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
RA ++ L + V ++ G+ P+ + + N R+E+ I R
Sbjct: 374 RALSVRKALQEVNVPD---VAYTGYGQYMPVGGSGSP----RNGRVEVWIKSR 419
>gi|270295719|ref|ZP_06201919.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273123|gb|EFA18985.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 397
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 48/126 (38%), Gaps = 5/126 (3%)
Query: 34 NDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ N++ ++L A+++ ++ +T ++V + + +
Sbjct: 256 AEMGAANQQLQNALVAAQNQPVAEVTETEVIVPDPD----IAPRTVFFNIGSAEVSPREA 311
Query: 94 PMLQLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
L +A + +FP+ + + DS GT N +S +RA + L+++ +
Sbjct: 312 MNLSYLADQMKQFPNATYTVNGYADSATGTPAFNKELSLKRAQAVVDVLVKQYGIPADRL 371
Query: 153 SVRGFA 158
V
Sbjct: 372 KVDAGG 377
>gi|160889622|ref|ZP_02070625.1| hypothetical protein BACUNI_02048 [Bacteroides uniformis ATCC 8492]
gi|156860614|gb|EDO54045.1| hypothetical protein BACUNI_02048 [Bacteroides uniformis ATCC 8492]
Length = 379
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 42/130 (32%), Gaps = 9/130 (6%)
Query: 37 DIVNKRFGSSLDKAEDEFQM------QLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLE 89
D VN + L + V + + P + F L+
Sbjct: 233 DAVNAEINRYRSELAQAQADLANCKNALANAKPEVKEVTKEVEVAGPRAIFFKIGSARLD 292
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSS 148
++L A IL P + + D G+ N +S++RA V+ LI +
Sbjct: 293 DYGKVNIELAAKILKANPDKKYKVAGYADKATGSASWNQKLSEKRAQVVYDALIAQ-GVD 351
Query: 149 NRFISVRGFA 158
+ + GF
Sbjct: 352 KDQLELVGFG 361
>gi|331645436|ref|ZP_08346540.1| putative motility protein [Escherichia coli M605]
gi|331045598|gb|EGI17724.1| putative motility protein [Escherichia coli M605]
Length = 318
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 153 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 206
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 207 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 266
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 267 PQS--AGNRRIEIMVLTK 282
>gi|237718935|ref|ZP_04549416.1| LOW QUALITY PROTEIN: bacterial outer membrane protein [Bacteroides
sp. 2_2_4]
gi|229451713|gb|EEO57504.1| LOW QUALITY PROTEIN: bacterial outer membrane protein [Bacteroides
sp. 2_2_4]
Length = 310
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 47/121 (38%), Gaps = 6/121 (4%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + + + + + ++ LP ++ +A+ + K+P + + I+
Sbjct: 188 EECRTKVVPIETVVKTARVPESIITFRQGRSSVDASQLPNVERVASYMKKYPDSKVIIKG 247
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ G ++ N I+ RA+ +K+ L+ + + I+ + T+ N
Sbjct: 248 YASPEGNVEINAKIATARAEAVKTILVNKYKINTSRITA----EDQGVGDMFTEPDW--N 301
Query: 176 Q 176
+
Sbjct: 302 R 302
>gi|319942877|ref|ZP_08017160.1| cytochrome c oxidase, subunit II [Lautropia mirabilis ATCC 51599]
gi|319743419|gb|EFV95823.1| cytochrome c oxidase, subunit II [Lautropia mirabilis ATCC 51599]
Length = 205
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/172 (12%), Positives = 47/172 (27%), Gaps = 34/172 (19%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G +E ++ + + E Q +
Sbjct: 62 GTSTTDQETAAAAAAQNAASSAQTEAVNEEFVAFEQATPAQPAGS--------------- 106
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ L + + L + + + D G + N +++ RA
Sbjct: 107 --IHFESASATLPADAQKAIATVVEALKAAEGRRVLLAGYHDPTGNIDFNRDLAKRRALG 164
Query: 137 IKSYLIQRGVSSNRFI-----SVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
++ LI +G+ + R I G N+ + +R+EI +
Sbjct: 165 VRDALIAQGIPAQRIILRKPEQTTGSG-------NNAEA-----RRVEILLI 204
>gi|292489120|ref|YP_003532007.1| chemotaxis protein MotB [Erwinia amylovora CFBP1430]
gi|292900239|ref|YP_003539608.1| motility protein B [Erwinia amylovora ATCC 49946]
gi|291200087|emb|CBJ47213.1| chemotaxis protein (motility protein B) [Erwinia amylovora ATCC
49946]
gi|291554554|emb|CBA22155.1| Chemotaxis protein motB (Motility protein B) [Erwinia amylovora
CFBP1430]
gi|312173278|emb|CBX81533.1| Chemotaxis protein motB (Motility protein B) [Erwinia amylovora
ATCC BAA-2158]
Length = 302
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 62/153 (40%), Gaps = 10/153 (6%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKFLP-MLQLIATI 102
++ +++ + + ++ G MI F + + ++ +LQ + +
Sbjct: 121 ETMIESDPRLSNFKSNLMLTLTDDGLMIQITDSQERPMFKTGSEAPESYMNGILQALVPL 180
Query: 103 LNKFPSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
L + P+ +++ HTDS+ +N +S RA+ + LI G+ +R + V G
Sbjct: 181 LKELPN-SLSLTGHTDSLAYAGGSGGYSNWELSTGRANAARRVLINAGLDDDRILRVIGT 239
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + N+RI + + + ++
Sbjct: 240 GSRMGLADIS--ADNPMNRRISVLVLSKLKERQ 270
>gi|152982739|ref|YP_001354366.1| OmpA family protein [Janthinobacterium sp. Marseille]
gi|151282816|gb|ABR91226.1| OmpA family protein [Janthinobacterium sp. Marseille]
Length = 222
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 16/170 (9%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI---PVHVSFVSEV 86
+ E L + + I +++
Sbjct: 55 TPGDAVAGCDGALVSPIPNPTAPEVASHLDGKVAPAAIAANSCDFTIALESDQTFGLNQA 114
Query: 87 FLEKKFLPMLQL-IATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L + + + L + I +TD +G ++N +S++RA + YL ++
Sbjct: 115 VLNRAAKSRIDRDVLPKLTACNGASGMTITGYTDLLGNARSNQALSEKRAAAVADYLKKK 174
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGR-------QNNQRIEIQI--FPR 185
GV+ N + V G P+ D+K+ R N+R+ I++ P+
Sbjct: 175 GVTVN--MKVTGVGASQPVKDCDSKLNRTKLVACLAPNRRVLIEMHNLPK 222
>gi|331671822|ref|ZP_08372618.1| putative motility protein [Escherichia coli TA280]
gi|331070811|gb|EGI42170.1| putative motility protein [Escherichia coli TA280]
Length = 318
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 153 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 206
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 207 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 266
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 267 PQS--AGNRRIEIMVLTK 282
>gi|254882694|ref|ZP_05255404.1| bacterial outer membrane protein [Bacteroides sp. 4_3_47FAA]
gi|254835487|gb|EET15796.1| bacterial outer membrane protein [Bacteroides sp. 4_3_47FAA]
Length = 381
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 48/107 (44%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ + Q V+ + + + ++ LP ++ IA+ +N+ P + +
Sbjct: 253 QKQLAECQSKKPVIETVIEKAKTLESIVTFRQGSSKVDVSQLPNVERIASYMNRHPESKV 312
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
I+ ++ G+++ N I+ RA+ +KS L+++ + I+ G
Sbjct: 313 VIKGYSSPEGSIEVNERIACARAESVKSILMKKYRIAASRITAEGQG 359
>gi|192291615|ref|YP_001992220.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
gi|192285364|gb|ACF01745.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
Length = 285
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 56/172 (32%), Gaps = 18/172 (10%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD--------TGIVVSRIGDMITCYIPVH-- 79
+ + + + A + LQD +V + +
Sbjct: 108 ESGGSGSAASHAKAEREFALASASLRQALQDVPELAEMSKNVVFEETPVGLNLELTDQDG 167
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS---IGTLKNNLLISQERA 134
+ ++ ++ +A L S + I HT + + L +S RA
Sbjct: 168 RPMFPDGSAVPYERTRKLVARLAAPLRAT-SLRVIIVGHTAATVVQAGDDDPLSLSVNRA 226
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ ++ L Q G+ S++ +S+ G P+ + N+R+ I +
Sbjct: 227 NAVREVLKQEGLPSSQVLSLVGKGDGEPLFPDAPA--LAANRRVTITLMREN 276
>gi|222823912|ref|YP_002575486.1| chemotaxis protein MotB, [Campylobacter lari RM2100]
gi|222539134|gb|ACM64235.1| chemotaxis protein MotB, putative [Campylobacter lari RM2100]
Length = 316
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIA-----TILN 104
E+ + ++ + +P V F + L+ + L+ I IL
Sbjct: 156 ENTIKNLQAKFDTNITLDSNTGAIVLPSEVLFDTNSFTLKAQAKENLKTILTQYFDNILK 215
Query: 105 K----FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS--NRFISVRGFA 158
I I+ HTDS G+ NL +SQ+RA + S++ + + G +
Sbjct: 216 DENILNSIENIVIEGHTDSAGSYIYNLDLSQKRAYAVMSFIHSFYKDPRLQKLLMASGRS 275
Query: 159 YKYPIDTNDTKVGRQNNQRIEIQ 181
Y + T D K ++ ++RIEI+
Sbjct: 276 YSD-VITKDGKEDKEASRRIEIK 297
>gi|32035883|ref|ZP_00135676.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 137
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 12/119 (10%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + L+ L T + + I + +TD IG +NL +SQ
Sbjct: 12 SSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQR 71
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR-------QNNQRIEIQI 182
RA+ + +YL+ + + ++ G+ P+ T D GR ++R+E+Q+
Sbjct: 72 RAETVANYLVSK-GQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 129
>gi|229520255|ref|ZP_04409681.1| chemotaxis protein MotB-related protein [Vibrio cholerae TM
11079-80]
gi|167832518|gb|ACA01828.1| hypothetical protein VPI2_0011c [Vibrio cholerae]
gi|229342621|gb|EEO07613.1| chemotaxis protein MotB-related protein [Vibrio cholerae TM
11079-80]
Length = 244
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 66/214 (30%), Gaps = 35/214 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L ++ ++ ++ L +K ++ ++ + + +L ++
Sbjct: 26 LMSALLVIFILAAVALIIELTQKTNDVEAGIEELKQAELAR--KNIIYDVRDELAKRNVI 83
Query: 65 VSRIGDMITCYIPVHV--SFVSEVFLEKKF--LPMLQLIATILNKFPSTV--------IA 112
V + IP + + ++ I +L+ I
Sbjct: 84 VEIADNDTVIRIPESTLTFASGKSSIPNDATIQQAVKDIGVVLHSAIQKKDRFQYLDTIF 143
Query: 113 IQSHTDS---IGTLKNNLLISQERADVIKSYLIQR-----------GVSSNRFISVRGFA 158
I+ HTDS K N +S +RA + + + SV G+A
Sbjct: 144 IEGHTDSDSIHYRGKGNWGLSTDRAISVWNVWQNELSLTPKLGDLENAYHAKLFSVSGYA 203
Query: 159 YKYPIDT--NDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + N+RI+I+ +KK
Sbjct: 204 ATR-RANLHESNQQEKSQNRRIDIRFT----VKK 232
>gi|93005427|ref|YP_579864.1| hypothetical protein Pcryo_0597 [Psychrobacter cryohalolentis K5]
gi|92393105|gb|ABE74380.1| hypothetical protein Pcryo_0597 [Psychrobacter cryohalolentis K5]
Length = 237
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 49/164 (29%), Gaps = 14/164 (8%)
Query: 4 ELGLSMFIMTTISGCGLA------SREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQM 56
L + T++GC + + + + D +D+ E +
Sbjct: 7 STLLLLAASITLAGCQTTEIVPPKTTPQYENIRTMQAEIDSDGDGVLDDIDECPETPPNV 66
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ G + + L + + +A LN +P + I H
Sbjct: 67 VVDAKGCPIEVDVGGLEMEFNG-FFPPMRNQLPDIYDAVFVKVAENLNDYPKANVFIFGH 125
Query: 117 TDSIGTLKNNLLI------SQERADVIKSYLIQRGVSSNRFISV 154
+ K+ L S+ RA IK+ L+ + + I
Sbjct: 126 VATNEIDKDALATLGFDSLSRNRALSIKNTLVLQHHIDAKRIRT 169
>gi|332186615|ref|ZP_08388358.1| ompA family protein [Sphingomonas sp. S17]
gi|332013267|gb|EGI55329.1| ompA family protein [Sphingomonas sp. S17]
Length = 220
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
++ L + Q+ A L + I+ HTD G + N +S RA +
Sbjct: 118 FELNSARLSAEGTRAAQVFARSLLMPELKDKRFLIEGHTDLRGGARINGPLSTARAKAVA 177
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
YL+ GV +R + RGF P+ +K N+R+E ++
Sbjct: 178 DYLVTLGVDRSR-LETRGFGSAMPL-PGHSKAD-PVNRRVEAELIS 220
>gi|15799935|ref|NP_285947.1| hypothetical protein Z0291 [Escherichia coli O157:H7 EDL933]
gi|15829511|ref|NP_308284.1| hypothetical protein ECs0256 [Escherichia coli O157:H7 str. Sakai]
gi|291281074|ref|YP_003497892.1| putative motility protein [Escherichia coli O55:H7 str. CB9615]
gi|293413506|ref|ZP_06656155.1| hypothetical protein ECDG_00047 [Escherichia coli B185]
gi|331651164|ref|ZP_08352189.1| putative motility protein [Escherichia coli M718]
gi|12513001|gb|AAG54555.1|AE005201_8 putative motility protein [Escherichia coli O157:H7 str. EDL933]
gi|13359714|dbj|BAB33680.1| putative motility protein [Escherichia coli O157:H7 str. Sakai]
gi|209745376|gb|ACI70995.1| putative motility protein [Escherichia coli]
gi|209745378|gb|ACI70996.1| putative motility protein [Escherichia coli]
gi|209745380|gb|ACI70997.1| putative motility protein [Escherichia coli]
gi|209745382|gb|ACI70998.1| putative motility protein [Escherichia coli]
gi|290760946|gb|ADD54907.1| Putative motility protein [Escherichia coli O55:H7 str. CB9615]
gi|291433564|gb|EFF06537.1| hypothetical protein ECDG_00047 [Escherichia coli B185]
gi|323938776|gb|EGB35022.1| OmpA family protein [Escherichia coli E1520]
gi|331050905|gb|EGI22957.1| putative motility protein [Escherichia coli M718]
Length = 261
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 96 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 149
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 150 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 209
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 210 PQS--AGNRRIEIMVLTK 225
>gi|285019703|ref|YP_003377414.1| flagellar motor protein [Xanthomonas albilineans GPE PC73]
gi|283474921|emb|CBA17420.1| probable flagellar motor protein [Xanthomonas albilineans]
Length = 383
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 61/159 (38%), Gaps = 16/159 (10%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLP 94
+ + + ++DK + + ++ G I + + + L+
Sbjct: 130 ESLMQEMKEAIDK-SQALEPFKDQLLLDLTPDGLRIQIVDKENRPMFDLGSAVLKPYTRG 188
Query: 95 MLQLIATILNKFPSTVIAIQSHT----DSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+L ++ +N+ P+ I+I HT S +N +S +RA+ + L+ G+S ++
Sbjct: 189 ILHELSGFINQVPN-HISITGHTDVTQYSGKNGYSNWELSADRANAARRELVAGGMSEDK 247
Query: 151 FISVRGFAYKYPI---DTNDTKVGRQNNQRIEIQIFPRG 186
V G + N+ N+RI I + +
Sbjct: 248 VSRVVGLSSSVLFDKQVPNNP-----INRRISIVVMTKD 281
>gi|144898283|emb|CAM75147.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Magnetospirillum gryphiswaldense MSR-1]
Length = 157
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
++ ++ + ++ +A + T + + TD +G+ N+ +SQ RAD +
Sbjct: 49 QIYFDTNKTDIDSRGRMVVNSVAHVATNNGLTRVTVIGKTDRVGSTAGNVALSQRRADQV 108
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ LI GV ++R I + Q N+ +++ +
Sbjct: 109 RDALIAAGVPADR-IDTSWTGEARQAVSTANDAEEQRNRVVDVTVV 153
>gi|281177445|dbj|BAI53775.1| putative motility protein [Escherichia coli SE15]
Length = 262
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 97 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 150
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 151 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 210
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 211 PQS--AGNRRIEIMVLTK 226
>gi|110677964|ref|YP_680971.1| chemotaxis protein MotB, putative [Roseobacter denitrificans OCh
114]
gi|109454080|gb|ABG30285.1| chemotaxis protein MotB, putative [Roseobacter denitrificans OCh
114]
Length = 279
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 53/182 (29%), Gaps = 20/182 (10%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG-----------IVVSR 67
+ +K + D +S ++ + + + G IV
Sbjct: 99 ATSQHATRKQAASGESGNDDDGGERDTSDEELQALVEELMGRGGESTVMENALEHIVTRI 158
Query: 68 IGDMITCYI---PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-- 122
+ + + F + + L + + + IAI +H S
Sbjct: 159 TDEGLVIELFALDGLPLFEPNSDVPTPLMTQLVELVASVAFAATNDIAIGAHVPSRPIVV 218
Query: 123 -LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S +RA + L + G+ R V G A + P N N R+EI
Sbjct: 219 AQNPVWDASTDRATRTRLMLQENGLEPERMQRVTGHADREPAHLNPMAT---RNSRVEIV 275
Query: 182 IF 183
+
Sbjct: 276 LL 277
>gi|332341583|gb|AEE54917.1| lateral flagellar motor protein B LafU [Escherichia coli UMNK88]
Length = 256
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 91 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 144
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 145 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 204
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 205 PQS--AGNRRIEIMVLTK 220
>gi|168750213|ref|ZP_02775235.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4113]
gi|168763471|ref|ZP_02788478.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4501]
gi|168770028|ref|ZP_02795035.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4486]
gi|168782991|ref|ZP_02807998.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4076]
gi|168789703|ref|ZP_02814710.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC869]
gi|168800332|ref|ZP_02825339.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC508]
gi|187776213|ref|ZP_02801137.2| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4196]
gi|189402400|ref|ZP_02782265.2| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4401]
gi|194432761|ref|ZP_03065046.1| putative chemotaxis protein [Shigella dysenteriae 1012]
gi|195938633|ref|ZP_03084015.1| hypothetical protein EscherichcoliO157_19762 [Escherichia coli
O157:H7 str. EC4024]
gi|208807047|ref|ZP_03249384.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4206]
gi|208811824|ref|ZP_03253153.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4045]
gi|208818543|ref|ZP_03258863.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4042]
gi|209397836|ref|YP_002268857.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4115]
gi|217325834|ref|ZP_03441918.1| putative chemotaxis protein [Escherichia coli O157:H7 str. TW14588]
gi|254791390|ref|YP_003076227.1| hypothetical protein ECSP_0264 [Escherichia coli O157:H7 str.
TW14359]
gi|261223715|ref|ZP_05937996.1| hypothetical protein EscherichiacoliO157_03796 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261255876|ref|ZP_05948409.1| hypothetical protein EscherichiacoliO157EcO_08593 [Escherichia coli
O157:H7 str. FRIK966]
gi|187768449|gb|EDU32293.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4196]
gi|188015577|gb|EDU53699.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4113]
gi|188999606|gb|EDU68592.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4076]
gi|189355696|gb|EDU74115.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4401]
gi|189361036|gb|EDU79455.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4486]
gi|189366384|gb|EDU84800.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4501]
gi|189370768|gb|EDU89184.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC869]
gi|189377329|gb|EDU95745.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC508]
gi|194419023|gb|EDX35107.1| putative chemotaxis protein [Shigella dysenteriae 1012]
gi|208726848|gb|EDZ76449.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4206]
gi|208733101|gb|EDZ81788.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4045]
gi|208738666|gb|EDZ86348.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4042]
gi|209159236|gb|ACI36669.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4115]
gi|217322055|gb|EEC30479.1| putative chemotaxis protein [Escherichia coli O157:H7 str. TW14588]
gi|254590790|gb|ACT70151.1| chemotaxis motB protein [Escherichia coli O157:H7 str. TW14359]
gi|320190216|gb|EFW64866.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
str. EC1212]
gi|320638165|gb|EFX07914.1| hypothetical protein ECO5101_07089 [Escherichia coli O157:H7 str.
G5101]
gi|320654674|gb|EFX22675.1| hypothetical protein ECO7815_10457 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660242|gb|EFX27752.1| hypothetical protein ECO5905_08983 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320665008|gb|EFX32118.1| hypothetical protein ECOSU61_13992 [Escherichia coli O157:H7 str.
LSU-61]
gi|326338763|gb|EGD62582.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
str. 1044]
gi|326342450|gb|EGD66230.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
str. 1125]
gi|332097320|gb|EGJ02301.1| lateral flagellar motor protein B [Shigella dysenteriae 155-74]
Length = 256
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 91 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 144
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 145 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 204
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 205 PQS--AGNRRIEIMVLTK 220
>gi|85058002|ref|YP_453704.1| flagellar motor protein MotB [Sodalis glossinidius str.
'morsitans']
gi|84778522|dbj|BAE73299.1| chemotaxis protein MotB [Sodalis glossinidius str. 'morsitans']
Length = 341
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 56/150 (37%), Gaps = 10/150 (6%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+ + + + + I + G I + + +L++IA +
Sbjct: 117 EQMLRNDPRLRELQPNMRITLVHDGLRIEIIDSKKRPMFATGGTAIAPYMRSILRIIAPV 176
Query: 103 LNKFPSTVIAIQSHTDSIGTLKN-----NLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
L+ P+ I++ HTD+ L N +S +RA+ + L++ G++ ++ + V G
Sbjct: 177 LDNLPN-RISLAGHTDNQPYLNGERGYGNWELSTDRANASRRELVEGGLAGDKILRVIGM 235
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
A +RI I I R
Sbjct: 236 ANTM--APAGKVDDNAAQRRISIVILTREK 263
>gi|330910071|gb|EGH38581.1| flagellar motor rotation protein MotB [Escherichia coli AA86]
Length = 256
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 91 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 144
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 145 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 204
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 205 PQS--AGNRRIEIMVLTK 220
>gi|170739034|ref|YP_001767689.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
gi|168193308|gb|ACA15255.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
Length = 624
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATI----LNKFPSTVIAIQSHTDSIGTLKNNLLI 129
I + L IA + P V I+ HTD++G+ +NL +
Sbjct: 502 VDIDTITFETGSWQVAPDQARRLAAIAEAIRRAVEHNPQEVFLIEGHTDAVGSEVDNLSL 561
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA + + L + ++ +G+ +Y +T+ + N+R+ +I P
Sbjct: 562 SDRRAQEVAAVLTRDFRVPPENLTTQGYGEQYLKV--NTQEANRENRRVTARRITP 615
>gi|296156854|ref|ZP_06839691.1| efflux transporter, RND family, MFP subunit [Burkholderia sp.
Ch1-1]
gi|295892740|gb|EFG72521.1| efflux transporter, RND family, MFP subunit [Burkholderia sp.
Ch1-1]
Length = 558
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 57/173 (32%), Gaps = 14/173 (8%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+G + N ++ A +Q + +
Sbjct: 392 AGQANNGGNPASASGQAGASSVSGNVNGAAAAGSAGALGNAGVQANSAPGTTRSESAASS 451
Query: 76 IPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
V F L+ + L +A L P + I +TDS GT + N+ ++ RA
Sbjct: 452 GQTAVFFAVGSASLDPQSAEALAGVARRLLAAPGSRAVISGYTDSSGTYEANVKLAAARA 511
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYP---IDTNDTKVGRQNNQRIEIQIFP 184
++S L+ GV R + P + ++ ++R+++ + P
Sbjct: 512 ATVRSALVVAGVDVARID------MRRPARIVASDAPD----RSRRVDVTLAP 554
>gi|126738556|ref|ZP_01754261.1| chemotaxis protein MotB [Roseobacter sp. SK209-2-6]
gi|126720355|gb|EBA17061.1| chemotaxis protein MotB [Roseobacter sp. SK209-2-6]
Length = 278
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 61/183 (33%), Gaps = 19/183 (10%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS--------R 67
+G + + ++ +D S L E++ Q + ++ + +
Sbjct: 97 TGATDMNPMDAQQAQGETGVSDSQKAEEDSKLRAIEEQLQGRGGESMVSIEMARHIITRI 156
Query: 68 IGDMITCYI----PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT- 122
+ + + + F L + + ++ + +A+ H S
Sbjct: 157 SDEGLIIELFETETAKLFEDGTAEPTPLFRD-LVRMVSRVSATVANEVAVSGHIQSQPVV 215
Query: 123 --LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+S +RAD ++ L G+ +NR V G+A + N N R+EI
Sbjct: 216 IAQNPVWGVSHQRADAARTLLESGGMKANRIQRVTGYADRKLAAQNPMS---PRNNRVEI 272
Query: 181 QIF 183
+
Sbjct: 273 ILL 275
>gi|86360406|ref|YP_472294.1| hypothetical protein RHE_PE00129 [Rhizobium etli CFN 42]
gi|86284508|gb|ABC93567.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 653
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 8/125 (6%)
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
GI + ++ IPV ++F + + + L + + + HTD
Sbjct: 527 GGIYSENVRGIVPVSIPVPITFDFDKSTFTSIGTEAAEELLEALKEQKPGRVILIGHTDR 586
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID----TNDTKVG-RQN 174
G N +S+ RA + +L G+ + I G P+D N T+
Sbjct: 587 KGGDDYNQKLSERRAQAVADFLKNHGIDAT--IDAEGRGASEPVDVTATANLTEDDIDAL 644
Query: 175 NQRIE 179
N+R+E
Sbjct: 645 NRRVE 649
>gi|126725476|ref|ZP_01741318.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2150]
gi|126704680|gb|EBA03771.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2150]
Length = 216
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 4/103 (3%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILN--KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ ++F L ++A IL T + + H+D+ G+ K N + RA +K
Sbjct: 111 FPQGSDIIVEEFGQHLDMLAGILQYSSLSQTCLKLVGHSDTSGSAKANFNMGMLRAKAVK 170
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
YL R ++ I V P+ T N+R+EI
Sbjct: 171 GYLTNRTAFASTRIEVTSEGEDAPLQGISTTD--PKNRRVEIW 211
>gi|26246276|ref|NP_752315.1| hypothetical protein c0378 [Escherichia coli CFT073]
gi|26106674|gb|AAN78859.1|AE016756_42 MbhA protein [Escherichia coli CFT073]
Length = 262
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 97 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 150
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 151 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 210
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 211 PQS--AGNRRIEIMVLTK 226
>gi|331656310|ref|ZP_08357272.1| MbhA protein [Escherichia coli TA206]
gi|331054558|gb|EGI26567.1| MbhA protein [Escherichia coli TA206]
Length = 261
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 96 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 149
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 150 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 209
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 210 PQS--AGNRRIEIMVLTK 225
>gi|227884752|ref|ZP_04002557.1| chemotaxis protein [Escherichia coli 83972]
gi|227838353|gb|EEJ48819.1| chemotaxis protein [Escherichia coli 83972]
gi|307552161|gb|ADN44936.1| putative motility protein [Escherichia coli ABU 83972]
Length = 256
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 91 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 144
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 145 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 204
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 205 PQS--AGNRRIEIMVLTK 220
>gi|222032078|emb|CAP74817.1| Protein mbhA [Escherichia coli LF82]
Length = 261
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 96 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 149
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ N+ + V A + +D +
Sbjct: 150 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMADQMLLDAKN 209
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 210 PQS--AGNRRIEIMVLTK 225
>gi|89890270|ref|ZP_01201780.1| hypothetical protein BBFL7_02242 [Flavobacteria bacterium BBFL7]
gi|89517185|gb|EAS19842.1| hypothetical protein BBFL7_02242 [Flavobacteria bacterium BBFL7]
Length = 286
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 15/124 (12%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS------- 119
+IGD + + + L + P++ I L I IQ H
Sbjct: 165 QIGDKLVFN--NVIFYPGRHVLRESSFPVMDSIINSLLLHKKYEIEIQGHICCLSPGVYG 222
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+S+ RA+ +K +L++ GV+++R ++ + T G ++R+E
Sbjct: 223 RDMDTGQWNLSKARAEQVKRFLVKYGVAADRLTTI---GKQ---ANFKTGKGDFYDRRVE 276
Query: 180 IQIF 183
I I
Sbjct: 277 IHIT 280
Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 4/112 (3%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
L ++ + L+ + T IA+ + D G++ N ++ R +
Sbjct: 32 SIYFETDSAILTEQSIKNLEARLIVDQTTKITAIALIGYCDDRGSVSYNQQLATNRVQSV 91
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDT-KVGRQNNQRIEIQIFPRGNI 188
+YL R + + G + P+ K R N+R+EI + + I
Sbjct: 92 INYLKPRFTDNYFQQKIVG---EVPLKNRSNIKAQRYRNRRVEISVTYKRTI 140
>gi|237712867|ref|ZP_04543348.1| bacterial outer membrane protein [Bacteroides sp. D1]
gi|262409699|ref|ZP_06086238.1| bacterial outer membrane protein [Bacteroides sp. 2_1_22]
gi|229447091|gb|EEO52882.1| bacterial outer membrane protein [Bacteroides sp. D1]
gi|262352441|gb|EEZ01542.1| bacterial outer membrane protein [Bacteroides sp. 2_1_22]
Length = 305
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 47/121 (38%), Gaps = 6/121 (4%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + + + + + ++ LP ++ +A+ + K+P + + I+
Sbjct: 183 EECRTKVVPIETVVKTARVPESIITFRQGRSSVDASQLPNVERVASYMKKYPDSKVIIKG 242
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ G ++ N I+ RA+ +K+ L+ + + I+ + T+ N
Sbjct: 243 YASPEGNVEINAKIATARAEAVKTILVNKYKINTSRITA----EDQGVGDMFTEPDW--N 296
Query: 176 Q 176
+
Sbjct: 297 R 297
>gi|254417815|ref|ZP_05031539.1| OmpA family protein [Brevundimonas sp. BAL3]
gi|196183992|gb|EDX78968.1| OmpA family protein [Brevundimonas sp. BAL3]
Length = 384
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 36/105 (34%), Gaps = 1/105 (0%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V L + ++ AT T + I +TD+ G+ NL +S R+ +
Sbjct: 279 VVYFDWDRSDLTTEARSVVSQAATYAKSGRPTRVLIVGYTDTSGSAAYNLGLSNRRSRTV 338
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L+ + + I++ V N+R I I
Sbjct: 339 ADALVAQ-GVNGGVIALDAKGETALAKPTADGVREPLNRRATIDI 382
>gi|103488396|ref|YP_617957.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
gi|98978473|gb|ABF54624.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
Length = 287
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 9/140 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--SFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + ++ + G I + L + +A + +
Sbjct: 144 QSKGDLRRLARNLHFTETMEGLRIDIVDDADFSMFALGTSQLTPAGAKLFAEVAVPIAEA 203
Query: 107 PSTVIAIQSHTDSIGTLK----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
P+ + I+ HTD+ NN +S +RA+V + YL RGV+S+RF + G A + P
Sbjct: 204 PN-QLMIRGHTDAAPWSAKSGTNNWRLSVDRAEVTRHYLEFRGVASDRFARIEGVADREP 262
Query: 163 IDTNDTKVGRQNNQRIEIQI 182
+D R N+RI I +
Sbjct: 263 YIPSDRFDPR--NRRISITL 280
>gi|312970356|ref|ZP_07784537.1| lateral flagellar motor protein B [Escherichia coli 1827-70]
gi|310337005|gb|EFQ02143.1| lateral flagellar motor protein B [Escherichia coli 1827-70]
Length = 256
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 91 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 144
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 145 IIITGHTDAMAYKNNIYNNWNLSGDRAFSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 204
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 205 PQS--AGNRRIEIMVLTK 220
>gi|189423395|ref|YP_001950572.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
gi|189419654|gb|ACD94052.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
Length = 201
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 10/119 (8%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ I + ++ L + L+ I+ + + + +T +IGT
Sbjct: 86 VTPRNELPEIKGLLGTVHFQLNSSRLSQFEQGNLEKISRDIPA--GNAVDVTGYTCTIGT 143
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N +S RA+ + + L +GV ++ G P +Q N+R+EI
Sbjct: 144 DDYNKKLSFSRAEAVATVLKAKGVHIG---TIEGKGKCCPAS-----QDKQQNRRVEII 194
>gi|293370937|ref|ZP_06617480.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
gi|294647105|ref|ZP_06724710.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
gi|294809380|ref|ZP_06768089.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
gi|292634006|gb|EFF52552.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
gi|292637551|gb|EFF55964.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
gi|294443398|gb|EFG12156.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
Length = 300
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 47/121 (38%), Gaps = 6/121 (4%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + + + + + ++ LP ++ +A+ + K+P + + I+
Sbjct: 178 EECRTKVVPIETVVKTARVPESIITFRQGRSSVDASQLPNVERVASYMKKYPDSKVIIKG 237
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
+ G ++ N I+ RA+ +K+ L+ + + I+ + T+ N
Sbjct: 238 YASPEGNVEINAKIATARAEAVKTILVNKYKINTSRITA----EDQGVGDMFTEPDW--N 291
Query: 176 Q 176
+
Sbjct: 292 R 292
>gi|13446371|gb|AAK20927.1| LafU [Aeromonas hydrophila]
Length = 315
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 10/123 (8%)
Query: 67 RIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL- 123
R G I + + F ML +A I + + + I HTDS
Sbjct: 165 RKGLRILIRDDDEREMYSRGSARISPFFRHMLMALAPIFQRVEN-RVMISGHTDSTPFAG 223
Query: 124 --KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-QNNQRIEI 180
+N +S +RA + + L+ G+ R V + +T R N+RIE+
Sbjct: 224 DNYSNWELSSDRAMMARRVLLAGGMPPERVGQVAAMSDTML---ENTADPRGSQNRRIEL 280
Query: 181 QIF 183
+
Sbjct: 281 LVM 283
>gi|120555415|ref|YP_959766.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
gi|120325264|gb|ABM19579.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 309
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
L + + +L I T + I + H+DSIG+ +N +S+E
Sbjct: 185 VRRSRVPFASGSTSLSQADMNLLDNIVTYVMADSTVERIFVDGHSDSIGSRIDNRALSEE 244
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-QNNQRIEIQIFPRGN 187
RA+V+ ++ ++VR +YP+ R +N+R I++ +G
Sbjct: 245 RANVVAE-YLKSRGIDETMLTVRAHGDQYPV------SRRPADNRRTTIRLQRQGE 293
>gi|120435337|ref|YP_861023.1| secreted protein [Gramella forsetii KT0803]
gi|117577487|emb|CAL65956.1| secreted protein [Gramella forsetii KT0803]
Length = 177
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/177 (10%), Positives = 51/177 (28%), Gaps = 3/177 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L + ++ C ++E++ + S + + + + DT
Sbjct: 1 MKKLIIIALATMLVASCNNGNKEEEVRYSQDSEEINTFKAAIQDYEKADWEAMKKHYADT 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
V D + + L F+ +L +T + +
Sbjct: 61 AQVFHNTNDGKSIADIIKGHKEDGANLSSYSFIDEENEYEMVLTDDGNTWVNFWGDWKAT 120
Query: 121 --GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
G+ K ++ A + + + I + + ++ Q+N
Sbjct: 121 LSGSGKEVIIPVHLTAQFENGKIAREHGYWDNSIMIMAMQETDSLANSNDPANSQDN 177
>gi|110640466|ref|YP_668194.1| hypothetical protein ECP_0259 [Escherichia coli 536]
gi|191171446|ref|ZP_03032995.1| putative chemotaxis protein [Escherichia coli F11]
gi|110342058|gb|ABG68295.1| putative chemotaxis membrane protein [Escherichia coli 536]
gi|190908380|gb|EDV67970.1| putative chemotaxis protein [Escherichia coli F11]
gi|312944854|gb|ADR25681.1| hypothetical protein NRG857_01255 [Escherichia coli O83:H1 str. NRG
857C]
gi|320197285|gb|EFW71901.1| Flagellar motor rotation protein MotB [Escherichia coli WV_060327]
Length = 256
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 91 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 144
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ N+ + V A + +D +
Sbjct: 145 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMADQMLLDAKN 204
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 205 PQS--AGNRRIEIMVLTK 220
>gi|253996630|ref|YP_003048694.1| flagellar motor protein MotB [Methylotenera mobilis JLW8]
gi|253983309|gb|ACT48167.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8]
Length = 312
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 69/177 (38%), Gaps = 20/177 (11%)
Query: 26 KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----------IVVSRIGDMITCY 75
K+ + + + K L+ +++ + ++D+ I ++ G I
Sbjct: 107 KQKAVDIKDAKAALEKAEEQKLELLKEKIEKSIEDSPTLSKFKKQLLIDITTEGLRIQIV 166
Query: 76 IPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLL 128
+ + ++ ++ +L+ I +LN + I++ HTD+ +N
Sbjct: 167 DEQNRPMFESAKAEMQPYAKQILKEIGQMLNGVTN-KISLSGHTDAAPYSSGEKGYSNWE 225
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+S +RA+ + LI G+ + + V G + D + N+RI I + +
Sbjct: 226 LSSDRANASRRELIAGGMDEAKLLRVVGL-SSVSLFDKDDPLN-PINRRISIIVMNK 280
>gi|218440795|ref|YP_002379124.1| OmpA/MotB domain protein [Cyanothece sp. PCC 7424]
gi|218173523|gb|ACK72256.1| OmpA/MotB domain protein [Cyanothece sp. PCC 7424]
Length = 222
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 53/169 (31%), Gaps = 24/169 (14%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L F + I+ + LHK ++ + K + ++GI+V
Sbjct: 32 LLMFFALLFITA--------QVQLLHKQDELQKYKEAIDQLPVKIIKALNETIPNSGIIV 83
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL---------IATILNKFPSTVIAIQSH 116
++ + L+ + LQ + L + I+ H
Sbjct: 84 HPETGDVSLD-NRILFDEGSASLKPEGKQFLQQFIPIYSQHIFSNTLLDQQIIRVIIEGH 142
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSN------RFISVRGFAY 159
T S G+ +N+ +S RA + Y+ ++ + + G
Sbjct: 143 TSSKGSDSDNMELSLRRALSVSDYIFSDEINFPTKEKFQKKLLASGRGE 191
>gi|257126467|ref|YP_003164581.1| hypothetical protein Lebu_1722 [Leptotrichia buccalis C-1013-b]
gi|257050406|gb|ACV39590.1| hypothetical protein Lebu_1722 [Leptotrichia buccalis C-1013-b]
Length = 197
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 52/131 (39%), Gaps = 11/131 (8%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFL----EKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ I + + L + +++ I L + S + ++D+
Sbjct: 57 DIPMEDAKGELKISIRGFKENGKDLNEFERNRMKGIVRKIWNKL--YESADLEFIGYSDN 114
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
K +L ++ A++ + ++ R + V G + DTNDT GR NN+R+E
Sbjct: 115 TENKKLSLERAKRLAELFRESGLK---DEMRIVKVLGKGSENSSDTNDTVEGRYNNRRVE 171
Query: 180 IQIFPRGNIKK 190
I + +KK
Sbjct: 172 I--IGKNVVKK 180
>gi|28900586|ref|NP_800241.1| hypothetical protein VPA0731 [Vibrio parahaemolyticus RIMD 2210633]
gi|153840625|ref|ZP_01993292.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|260365466|ref|ZP_05778003.1| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|260877531|ref|ZP_05889886.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|260897528|ref|ZP_05906024.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|260901730|ref|ZP_05910125.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|28808966|dbj|BAC62074.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149745713|gb|EDM56843.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|308087083|gb|EFO36778.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308090536|gb|EFO40231.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308108906|gb|EFO46446.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|308114281|gb|EFO51821.1| outer membrane protein [Vibrio parahaemolyticus K5030]
Length = 187
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 12/190 (6%)
Query: 1 MIKELGLSMFIM--TTISGCGLASREKKKVFLHKSNDTDIV------NKRFGSSLDKAED 52
M K + ++ ++ C S + KS+DT I L +D
Sbjct: 1 MKKLIPFAIIFTSNVALANCINQSENYVTSKVLKSSDTKITQVDGKLASVINEDLSIVQD 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
E +++ T S D + + V +E +L + ++N+ I
Sbjct: 61 EKIEKVEATNATESCTFDKNSMSL-VLHYDTNEHYLTNVHKQAISKYLELVNE--DKRIL 117
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
++ HTD +G+ N +S RA YL + NR + + F PI +
Sbjct: 118 VEGHTDDVGSQAYNKSLSLRRASTASKYLKKDLGLGNRIVE-KAFGESAPICKVNENKLS 176
Query: 173 QNNQRIEIQI 182
N+R+ + I
Sbjct: 177 GCNRRVVLTI 186
>gi|260426487|ref|ZP_05780466.1| outer membrane protein, OmpA/MotB family [Citreicella sp. SE45]
gi|260420979|gb|EEX14230.1| outer membrane protein, OmpA/MotB family [Citreicella sp. SE45]
Length = 695
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 42/116 (36%), Gaps = 7/116 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILN----KFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + L + + + P V I+ HTD++G+ NL +
Sbjct: 577 VSVDSINFETGSAAIRPEEARALAALGNAMKQVIAERPGEVFLIEGHTDAVGSWTYNLAL 636
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI-QIFP 184
S RA+ + L + + ++G+ + + N+R + +I P
Sbjct: 637 SDRRAESVALALTEYFDVPPENMVLQGYGEGDLAV--QSDAAERENRRAAVRRITP 690
>gi|170767971|ref|ZP_02902424.1| lateral flagellar motor protein B [Escherichia albertii TW07627]
gi|170123459|gb|EDS92390.1| lateral flagellar motor protein B [Escherichia albertii TW07627]
Length = 222
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 55/138 (39%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 63 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 116
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L G+ ++ + V A + +D +
Sbjct: 117 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEDAGMPEDKVMQVSAMADQMLLDAKN 176
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 177 PQS--AGNRRIEIMVLTK 192
>gi|213422612|ref|ZP_03355677.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 90
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK--- 169
+ TD IG+ N +S++RA + YLI + + IS RG P+ N
Sbjct: 1 VLGFTDRIGSDAYNQGLSEKRAQSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVK 59
Query: 170 ------VGRQNNQRIEIQI 182
++R+EI++
Sbjct: 60 PRAALIDCLAPDRRVEIEV 78
>gi|220919231|ref|YP_002494535.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219957085|gb|ACL67469.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 357
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
P + +++ D+ + + +SQ AD L + + R +S G + P+ N
Sbjct: 279 PGVAVRVEAFVDATPDAQADQRLSQAMADAAVGRLREL-GVAERRLSGVGCGGERPLLPN 337
Query: 167 DTKVGRQNNQRIEIQ 181
T GR N+R+EI
Sbjct: 338 FTVRGRTANRRLEIV 352
>gi|71908555|ref|YP_286142.1| hypothetical protein Daro_2942 [Dechloromonas aromatica RCB]
gi|71848176|gb|AAZ47672.1| hypothetical protein Daro_2942 [Dechloromonas aromatica RCB]
Length = 425
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 3/136 (2%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ ++ D G+ R+ P +FV + L + L+ IA + +
Sbjct: 290 QQAAAAFGKIVDYGLEHRRLAVKFLFR-PGSTAFVQDAKLSGPYPLWLKTIAQR-SGGSA 347
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY-PIDTND 167
+ + HT G N +S RA+ +K L S + + G + + T
Sbjct: 348 NCLEVTGHTSPTGPEPLNERLSLLRAEYVKERLAGMSPSLAKRMIANGVGSRQTLVGTGR 407
Query: 168 TKVGRQNNQRIEIQIF 183
++R+E ++
Sbjct: 408 DDASDALDRRVEFKVI 423
>gi|114563549|ref|YP_751062.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114334842|gb|ABI72224.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 163
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 65/195 (33%), Gaps = 41/195 (21%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K + LS+ + T++GC A +E +
Sbjct: 1 MKRVNLSLPVIALLTLAGCQSAPVV------------------------VSEPIKTFSIS 36
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL----IATILNKFPSTVIAIQS 115
I + D V F K L +AT L + +Q
Sbjct: 37 PECIEYTLQTDNEMIIGFTPVYFEVNSD---KSYSKLDTHMSCVATYLANNSDKELNVQG 93
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND---TKVGR 172
TD GT+K N ++Q RAD + +LI G S+++ IS I+ N T R
Sbjct: 94 FTDDKGTVKYNKALAQRRADGLVEFLISLGTSNDQLIST-----TKVIEDNGVKLTSSER 148
Query: 173 QNNQRIEIQIFPRGN 187
+R+ I + +
Sbjct: 149 SKTRRVNFSITNKSS 163
>gi|308273805|emb|CBX30406.1| hypothetical protein N47_Q17290 [uncultured Desulfobacterium sp.]
Length = 185
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 47/176 (26%), Gaps = 18/176 (10%)
Query: 15 ISGCGLASR-----------------EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
++GC + +K + + + S A
Sbjct: 1 MAGCAGKENLIVLTPDANGTVGAIQFKNEKGSVVLDEPGKAIIAKDSQSPPSASTPIADA 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
T + + + L + ++ I + + S I + HT
Sbjct: 61 DTQTIFREALSAKPLAPQSFILYFDFDSNNLTAESNKLIDDILQAIKERDSQDIPVVGHT 120
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
D G N +S +RA ++ L+ + FI + P+ V
Sbjct: 121 DRAGNPDYNFSLSMQRATAVRD-LLVNRGIKSEFIQISSHGEGNPLIPTADNVAEA 175
>gi|291278011|gb|ADD91480.1| outer mebrane protein A [Riemerella columbina]
Length = 326
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 44/145 (30%), Gaps = 15/145 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC R+ V D+ + K ++ + + +
Sbjct: 195 GCPWPDRDNDGVLDKDDACPDVPGLAEYNGCPKPQEAYATEATGA--------------L 240
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + + L A I+ + HTD+ G NL +S+ERA
Sbjct: 241 QGIFFNFDKATIRPESNGKLDEAANIIKSSNGGTFLVTGHTDAKGNANYNLRLSRERAAS 300
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKY 161
+ + ++ S+ + +G
Sbjct: 301 VVA-ALEARGVSSSQLKSKGVGSAE 324
>gi|134288289|ref|YP_001110452.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
gi|134132939|gb|ABO59649.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
Length = 202
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ I + H D +G N +S RA + +YL+ +GV+ NR I G + P+
Sbjct: 127 DSPIKVVGHADEVGGDDYNQRLSVRRATAVSNYLVAKGVARNR-IESEGHGKREPVSPGA 185
Query: 168 TKVGRQNNQRIEIQIFPRG 186
N+R+ I + G
Sbjct: 186 G----AQNRRVVIGLVEEG 200
>gi|255693407|ref|ZP_05417082.1| OmpA family protein [Bacteroides finegoldii DSM 17565]
gi|260620791|gb|EEX43662.1| OmpA family protein [Bacteroides finegoldii DSM 17565]
Length = 378
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 49/107 (45%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ + Q+ V+ + + + ++ LP ++ IA+ +N+ P + +
Sbjct: 250 QKQLAECQNKKPVIETVIEKAKTLESIVTFRQGSSKVDVSQLPNVERIASYMNRHPESKV 309
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
I+ ++ G+++ N I++ RA+ +KS L ++ + I+ G
Sbjct: 310 VIKGYSSPEGSIEVNERIARARAESVKSILTKKYRIAASRITAEGQG 356
>gi|15641766|ref|NP_231398.1| chemotaxis protein MotB-related protein [Vibrio cholerae O1 biovar
El Tor str. N16961]
gi|121585850|ref|ZP_01675644.1| hypothetical protein VC274080_1816 [Vibrio cholerae 2740-80]
gi|121727708|ref|ZP_01680803.1| hypothetical protein VCV52_1737 [Vibrio cholerae V52]
gi|147673520|ref|YP_001217304.1| hypothetical protein VC0395_A1361 [Vibrio cholerae O395]
gi|153819630|ref|ZP_01972297.1| hypothetical protein A5C_1796 [Vibrio cholerae NCTC 8457]
gi|153821127|ref|ZP_01973794.1| hypothetical protein A5E_2064 [Vibrio cholerae B33]
gi|227081908|ref|YP_002810459.1| chemotaxis protein MotB-related protein [Vibrio cholerae M66-2]
gi|229508134|ref|ZP_04397639.1| chemotaxis protein MotB-related protein [Vibrio cholerae BX 330286]
gi|229511627|ref|ZP_04401106.1| chemotaxis protein MotB-related protein [Vibrio cholerae B33]
gi|229518766|ref|ZP_04408209.1| chemotaxis protein MotB-related protein [Vibrio cholerae RC9]
gi|229607695|ref|YP_002878343.1| chemotaxis protein MotB-related protein [Vibrio cholerae MJ-1236]
gi|255744822|ref|ZP_05418772.1| chemotaxis protein MotB-related protein [Vibrio cholera CIRS 101]
gi|262161895|ref|ZP_06030913.1| chemotaxis protein MotB-related protein [Vibrio cholerae INDRE
91/1]
gi|262169763|ref|ZP_06037454.1| chemotaxis protein MotB-related protein [Vibrio cholerae RC27]
gi|298498167|ref|ZP_07007974.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9656285|gb|AAF94912.1| chemotaxis protein MotB-related protein [Vibrio cholerae O1 biovar
El Tor str. N16961]
gi|121549988|gb|EAX60006.1| hypothetical protein VC274080_1816 [Vibrio cholerae 2740-80]
gi|121630005|gb|EAX62413.1| hypothetical protein VCV52_1737 [Vibrio cholerae V52]
gi|126509834|gb|EAZ72428.1| hypothetical protein A5C_1796 [Vibrio cholerae NCTC 8457]
gi|126521323|gb|EAZ78546.1| hypothetical protein A5E_2064 [Vibrio cholerae B33]
gi|146315403|gb|ABQ19942.1| hypothetical protein VC0395_A1361 [Vibrio cholerae O395]
gi|227009796|gb|ACP06008.1| chemotaxis protein MotB-related protein [Vibrio cholerae M66-2]
gi|227013663|gb|ACP09873.1| chemotaxis protein MotB-related protein [Vibrio cholerae O395]
gi|229343455|gb|EEO08430.1| chemotaxis protein MotB-related protein [Vibrio cholerae RC9]
gi|229351592|gb|EEO16533.1| chemotaxis protein MotB-related protein [Vibrio cholerae B33]
gi|229355639|gb|EEO20560.1| chemotaxis protein MotB-related protein [Vibrio cholerae BX 330286]
gi|229370350|gb|ACQ60773.1| chemotaxis protein MotB-related protein [Vibrio cholerae MJ-1236]
gi|255737293|gb|EET92688.1| chemotaxis protein MotB-related protein [Vibrio cholera CIRS 101]
gi|262021997|gb|EEY40707.1| chemotaxis protein MotB-related protein [Vibrio cholerae RC27]
gi|262028627|gb|EEY47282.1| chemotaxis protein MotB-related protein [Vibrio cholerae INDRE
91/1]
gi|297542500|gb|EFH78550.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 244
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 66/214 (30%), Gaps = 35/214 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L ++ ++ ++ L +K ++ ++ + + +L ++
Sbjct: 26 LMSALLVIFILAAVALIIELTQKTNDVEAGIEELKQAELAR--KNIIYDVRDELAKRNVI 83
Query: 65 VSRIGDMITCYIPVHV--SFVSEVFLEKKF--LPMLQLIATILNKFPSTV--------IA 112
V + IP + + ++ I +L+ I
Sbjct: 84 VEIADNDTVIRIPESTLTFASGKSSIPNDATIQQAVKDIGVVLHSAIQKKDRFQYLDTIF 143
Query: 113 IQSHTDS---IGTLKNNLLISQERADVIKSYLIQR-----------GVSSNRFISVRGFA 158
I+ HTDS K N +S +RA + + + SV G+A
Sbjct: 144 IEGHTDSDSIHYRGKGNWGLSTDRAISVWNVWQNELSLTPKLGDLENAYHAKLFSVSGYA 203
Query: 159 YKYPIDT--NDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + N+RI+I+ +KK
Sbjct: 204 ATR-RANLHEANQQEKSQNRRIDIRFT----VKK 232
>gi|218550065|ref|YP_002383856.1| hypothetical protein EFER_2750 [Escherichia fergusonii ATCC 35469]
gi|218357606|emb|CAQ90245.1| flagellar system protein [Escherichia fergusonii ATCC 35469]
Length = 296
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 55/138 (39%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 131 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 184
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L G+ ++ + V A + +D +
Sbjct: 185 IIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEDAGMPEDKVMQVSAMADQMLLDAKN 244
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 245 PQS--AGNRRIEIMVLTK 260
>gi|170694367|ref|ZP_02885521.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170140790|gb|EDT08964.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 335
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 10/146 (6%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+A + Q I + G I + + +E +L+ I LN
Sbjct: 147 EANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATARDQVEPYMRDILREIGHTLNDV 206
Query: 107 PSTVIAIQSHTDSIGTL-----KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I +Q HTD+ +N +S +RA+ + LI G+ + + V G A
Sbjct: 207 PN-RIIVQGHTDAAQYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVMRVLGLASTQ 265
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ N N+RI + + R +
Sbjct: 266 NL--NKADPMDPENRRISVIVLNRKS 289
>gi|320158393|ref|YP_004190771.1| membrane protein [Vibrio vulnificus MO6-24/O]
gi|319933705|gb|ADV88568.1| membrane protein [Vibrio vulnificus MO6-24/O]
Length = 188
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 54/156 (34%), Gaps = 8/156 (5%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
K + + + L++ + + Q + + +++
Sbjct: 40 KTTQSEGSIVVDEGQTEARVLNRDVQKVKAQNSSEHCFFDEKKMSLVLNYQHNKFGLTD- 98
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ + + I P+ I+++ H DS G+ N +S RA+ + +L +
Sbjct: 99 -IHQDAIRSYIGIVD-----PNRKISVEGHADSTGSDTYNKQLSARRANTVARFLKKDLG 152
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NR + + F PI + N+R+ + +
Sbjct: 153 LGNRIVE-KAFGETTPICAAEENQQNGCNRRVVLTL 187
>gi|156977422|ref|YP_001448328.1| hypothetical protein VIBHAR_06209 [Vibrio harveyi ATCC BAA-1116]
gi|156529016|gb|ABU74101.1| hypothetical protein VIBHAR_06209 [Vibrio harveyi ATCC BAA-1116]
Length = 1585
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 24/145 (16%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVF-------LEKKFLPMLQLIATILNKFPSTVIA 112
+ + I + L + + + + +L + P IA
Sbjct: 628 GNEAKIYTDAMGVVVRIN---FKFNSAEFENEVKALNSNYEELCKKLRNLLVENPDYQIA 684
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF-------ISVRGFAYKYPI-- 163
+ H I + + NL++SQ R D IK ++ R +G A P
Sbjct: 685 LIGHGGPISSQEKNLIVSQRRIDTIKDRILNGTQGDERIKLERRLVTQAKGKAELLPKEG 744
Query: 164 -----DTNDTKVGRQNNQRIEIQIF 183
N+R+E+++
Sbjct: 745 GYHDHGDRSDTADIAINRRVEVRLV 769
>gi|27366554|ref|NP_762081.1| outer membrane protein [Vibrio vulnificus CMCP6]
gi|27358120|gb|AAO07071.1|AE016808_91 Outer membrane protein [Vibrio vulnificus CMCP6]
Length = 188
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 54/156 (34%), Gaps = 8/156 (5%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
K + + + L++ + + Q + + +++
Sbjct: 40 KTTQSEGSIVVDEGQTEARVLNRDVQKVKAQNSSEHCFFDEKKMSLVLNYQHNKFGLTD- 98
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ + + I P+ I+++ H DS G+ N +S RA+ + +L +
Sbjct: 99 -IHQDAIRSYIGIVD-----PNRKISVEGHADSTGSDTYNKQLSARRANTVARFLKKDLG 152
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NR + + F PI + N+R+ + +
Sbjct: 153 LGNRIVE-KAFGETTPICAAEENQQNGCNRRVVLTL 187
>gi|150021176|ref|YP_001306530.1| flagellar motor protein-like protein [Thermosipho melanesiensis
BI429]
gi|149793697|gb|ABR31145.1| Flagellar motor protein-like protein [Thermosipho melanesiensis
BI429]
Length = 288
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 13/120 (10%), Positives = 32/120 (26%), Gaps = 1/120 (0%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
G A L + E + + V +
Sbjct: 46 VAVGLTSALNGNPPSVLTGGKSLQTEPLISQNPGVYQEILKISEEYKGKVTVQEKDEGTL 105
Query: 74 CYIPV-HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
I + L + +L+ + T++ + + V+ I + I ++++ S
Sbjct: 106 ITISDLDIFEPGSARLTAEAKRLLEKLGTVIIEHTTNVLEIYGFANEIPLPESSIYFSNW 165
>gi|50235077|gb|AAT70741.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/166 (13%), Positives = 52/166 (31%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V + + K + E L+ TG +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEL--MLKATGA------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 QGIFFHFNKSSIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ S + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVSPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|37525779|ref|NP_929123.1| flagellar motor protein MotB [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785208|emb|CAE14143.1| chemotaxis protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 333
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 8/125 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----N 125
I + V +E +L+ IA ILN P+ I++ HTD + +
Sbjct: 149 QIIDRENRPMFMVGSAKVESYMSDILRAIAPILNDIPN-KISLSGHTDDLKYANGERGYS 207
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S +RA+ + L+ G+ + + V G A + D N+RI I + +
Sbjct: 208 NWELSADRANASRRELLIGGLDEVKILRVVGMASTVRLKQEDASA--PVNRRISILVLNK 265
Query: 186 GNIKK 190
++
Sbjct: 266 QAEER 270
>gi|332284002|ref|YP_004415913.1| chemotaxis protein [Pusillimonas sp. T7-7]
gi|330427955|gb|AEC19289.1| chemotaxis protein [Pusillimonas sp. T7-7]
Length = 310
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 49/164 (29%), Gaps = 24/164 (14%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQL 98
K +L + + Q + ++ G I + + ++ +L+
Sbjct: 118 KAELETLIETDPILQQFRPQLLLDMTPDGLRIQIIDKQNRPMFATGSAQVQSYMRDILRQ 177
Query: 99 IATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ N+ P+ ++I HTDSI S ++ + R + G
Sbjct: 178 LGPTFNRLPN-PLSISGHTDSIQYASGERDYSNWELSADRANAAR------RELVAGGMG 230
Query: 159 YKY------------PIDTNDTKVGRQNNQRIEIQIFPRGNIKK 190
I N N+RI I + + ++
Sbjct: 231 ESKVKRVLGLSSSVSLIKDNPAA---AVNRRISIVVLNQRAERR 271
>gi|228473928|ref|ZP_04058669.1| putative outer membrane protein [Capnocytophaga gingivalis ATCC
33624]
gi|228274442|gb|EEK13283.1| putative outer membrane protein [Capnocytophaga gingivalis ATCC
33624]
Length = 388
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 80 VSFVSEVFLE-KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ F + ++ + I +L P I ++ + ++GT + N +S +R++ +
Sbjct: 290 IYFANNAYVPLPHDTEAMDQIVAMLRDNPELSILLEGYASNVGTAEYNNQLSMKRSESVA 349
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L ++G+S R ++ ID + K +R++I +
Sbjct: 350 RLLQKQGISLQRILTA-----FRGIDDSVDKE---KARRVDISVI 386
>gi|254228178|ref|ZP_04921607.1| Flagellar motor protein [Vibrio sp. Ex25]
gi|262394011|ref|YP_003285865.1| chemotaxis protein MotB-like protein [Vibrio sp. Ex25]
gi|151939251|gb|EDN58080.1| Flagellar motor protein [Vibrio sp. Ex25]
gi|262337605|gb|ACY51400.1| chemotaxis protein MotB-related protein [Vibrio sp. Ex25]
Length = 244
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 29/213 (13%), Positives = 67/213 (31%), Gaps = 33/213 (15%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L ++ ++ ++ L +K ++ ++ + + +L ++
Sbjct: 26 LMSALLVIFILAAVALIIELTQKTNDVEAGIEELKQAELAR--KNIIYDVRDELAKRNVI 83
Query: 65 VSRIGDMITCYIPVHV--SFVSEVFLEKKF--LPMLQLIATILNKFPSTV--------IA 112
V + IP + + ++ I +L+ +
Sbjct: 84 VEIADNDTVIRIPESTLTFASGKSSIPNDATIQQAVKDIGVVLHSAIQKKDRFQYLDTVF 143
Query: 113 IQSHTDS---IGTLKNNLLISQERADVIKSYLIQR-----------GVSSNRFISVRGFA 158
I+ HTDS K N +S +RA + + + SV G+A
Sbjct: 144 IEGHTDSDSIHYRGKGNWGLSTDRAISVWNVWQNELSLTPKLGDLENAYHAKLFSVSGYA 203
Query: 159 YKYPID-TNDTKVGRQNNQRIEIQIFPRGNIKK 190
+ + + N+RI+I+ +KK
Sbjct: 204 ATRRANLQESNQQEKSQNRRIDIRFT----VKK 232
>gi|319946518|ref|ZP_08020754.1| peptidyl-prolyl cis-trans isomerase [Streptococcus australis ATCC
700641]
gi|319747349|gb|EFV99606.1| peptidyl-prolyl cis-trans isomerase [Streptococcus australis ATCC
700641]
Length = 274
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 4/93 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKS----NDTDIVNKRFGSSLDKAEDEFQM 56
M K + L +F ++GCG + K S T V+ LD+ + Q
Sbjct: 1 MKKLIALLVFSGLALAGCGSNQSDTKTSSSSASETKQTTTSSVDASEQKKLDQLRKDIQD 60
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
+ + V ++ + V ++ +
Sbjct: 61 AMTNENAVFPQLSKEVAEDEAVVKITTNKGDIT 93
>gi|325498393|gb|EGC96252.1| hypothetical protein ECD227_2490 [Escherichia fergusonii ECD227]
Length = 256
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 13/139 (9%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 91 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 144
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI-DTN 166
I I HTD++ N N +S +RA + L G+ ++ + V A + + N
Sbjct: 145 IIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEDAGMPEDKVMQVSAMADQMLLDAKN 204
Query: 167 DTKVGRQNNQRIEIQIFPR 185
G N+RIEI + +
Sbjct: 205 PQSSG---NRRIEIMVLTK 220
>gi|218688122|ref|YP_002396334.1| hypothetical protein ECED1_0264 [Escherichia coli ED1a]
gi|218425686|emb|CAR06478.1| flagellar system protein [Escherichia coli ED1a]
Length = 296
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 131 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 184
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 185 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 244
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 245 PQS--AGNRRIEIMVLTK 260
>gi|110589614|gb|ABG77309.1| outer membrane protein A [Acinetobacter baumannii]
Length = 273
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 187 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 246
Query: 115 SHTDSIGTLKNNLLISQERADVI 137
HTD+ G K N +S RA+ +
Sbjct: 247 GHTDNTGPRKLNERLSLARANSV 269
>gi|109675220|gb|ABG37059.1| outer membrane protein A [Acinetobacter baumannii]
Length = 282
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 195 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 254
Query: 115 SHTDSIGTLKNNLLISQERADVI 137
HTD+ G K N +S RA+ +
Sbjct: 255 GHTDNTGPRKLNERLSLARANSV 277
>gi|301019118|ref|ZP_07183322.1| OmpA family protein [Escherichia coli MS 69-1]
gi|300399377|gb|EFJ82915.1| OmpA family protein [Escherichia coli MS 69-1]
Length = 211
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 46 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 99
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 100 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 159
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 160 PQS--AGNRRIEIMVLTK 175
>gi|316933944|ref|YP_004108926.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315601658|gb|ADU44193.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
Length = 284
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 60/172 (34%), Gaps = 18/172 (10%)
Query: 30 LHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--------- 80
+ + + + A + LQD + ++I PV +
Sbjct: 107 EAGGSGSAASHAKAEREFALASASLRQALQDVPELTEMSRNVIFEETPVGLNLELTDQDG 166
Query: 81 --SFVSEVFLEKK-FLPMLQLIATILNKFPSTVIAIQSHTD---SIGTLKNNLLISQERA 134
F + + ++ +A L S I+I HT + L +S RA
Sbjct: 167 RPMFADGSAIPYERTRKLVARLAAPLRAT-SLRISIVGHTAATLMQVDDDDPLSLSINRA 225
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+ ++ L Q+G+ +++ +S+ G P+ + N+R+ I +
Sbjct: 226 NAVREILKQQGLPTSQVLSLVGKGDGDPLFPDAPM--LAANRRVTITLMREN 275
>gi|153874379|ref|ZP_02002623.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152069157|gb|EDN67377.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 275
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 42/137 (30%), Gaps = 3/137 (2%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
AE F L + +++ + + L ++ L+ IA +
Sbjct: 137 SDAEQAFAQLLAISLKESNQLNFRFLFEVGSTEFVNDQA-LRTEYSFWLREIAKYF-QNR 194
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-N 166
+ I H + +S RA ++ +I S V G +
Sbjct: 195 KSCFQIVGHRGKNEKRNDAQKLSLLRAKAVQQIMITHSPSITFQSKVLGKGNSENLSGIG 254
Query: 167 DTKVGRQNNQRIEIQIF 183
V ++R+EI +
Sbjct: 255 SNDVMDTLDRRVEIVVV 271
>gi|223041685|ref|ZP_03611882.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor
202]
gi|223017549|gb|EEF15963.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor
202]
Length = 344
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L +N + I + + D IG NL +SQ RA
Sbjct: 221 SDVLFAFGKSXLKPAAAQALDAANNEINALGLANPAIQVNGYXDRIGKZXXNLKLSQRRA 280
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV--GR-------QNNQRIEIQI 182
+ + +YL+ + + ++ G+ P+ N GR ++R+E+Q+
Sbjct: 281 ETVANYLVSK-GQNXANVTAVGYGXANPVTGNTCDAVKGRKALIACLAPDRRVEVQV 336
>gi|83311569|ref|YP_421833.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
gi|82946410|dbj|BAE51274.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
Length = 239
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 58/180 (32%), Gaps = 19/180 (10%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + L + ++ A E + + + L +
Sbjct: 1 MKLIHLITALTALVAVSACAEMEPMERPTTSTPMVTAPPPPAAPVPSAPMAADDVALPPS 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+VV ++ + + +L +A L VI +Q TD+ G
Sbjct: 61 PVVV--------------HFNHAKADITGSTMQVLWGLAPALKAAEPGVIRVQGFTDASG 106
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
N ++S++RA + L + GV++ I V G G +R+EI
Sbjct: 107 KAAYNRILSEKRAQAVADQLRKLGVTA--RIEVSGQGIVKGGKKGHKDQGA---RRVEIT 161
>gi|300790394|ref|YP_003770685.1| OmpA family protein [Amycolatopsis mediterranei U32]
gi|299799908|gb|ADJ50283.1| OmpA family protein [Amycolatopsis mediterranei U32]
Length = 242
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 10/125 (8%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHT-D 118
V D + P+ L + +A L K P + H
Sbjct: 126 DKAGVQAEIDRLLTEAPIA-FEPDTAKLTPDGEQAARSVAIALAKAPAGFRYRVTGHVAR 184
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
G L +S++RA + L G++ R ++ RG P G + ++R+
Sbjct: 185 GPGGESAALKLSRDRARAVARILTTNGLTVAR-VTYRGLGDTRP------ATGGEEDRRV 237
Query: 179 EIQIF 183
EI +
Sbjct: 238 EITVV 242
>gi|323135988|ref|ZP_08071071.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
gi|322399079|gb|EFY01598.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
Length = 341
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 16/155 (10%), Positives = 37/155 (23%), Gaps = 8/155 (5%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI--TCYIPVHVS 81
+ + + + L + + + +
Sbjct: 186 QPATPSTPTTQEPPAEPSPRTAESPGDPRAILAALPSGALDAAECQRALDAVAVVDRVEF 245
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ ++ L ++ + P I ++ H +N +S RA + YL
Sbjct: 246 REGSAAITRQAAEALDKAVALIRRCPDVTIEVRGHA-----DDDNEALSVRRAQAVARYL 300
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
R R + V G R +
Sbjct: 301 R-REGLGGRRVVVAGHGAHRARTAKAELDARAKFR 334
>gi|288576374|ref|ZP_05978680.2| protein tyrosine/serine phosphatase [Neisseria mucosa ATCC 25996]
gi|288565650|gb|EFC87210.1| protein tyrosine/serine phosphatase [Neisseria mucosa ATCC 25996]
Length = 203
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 34/98 (34%), Gaps = 1/98 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K +F ++ C +S ++ + + + +D + + +
Sbjct: 1 MMKRTIPIIFSAFLLAACQASSTQETRTMNTRLWAVSVKQDANLYRIDDKLYRSEQPVPE 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
G +S+ G + + +L++ + ++
Sbjct: 61 DGETISQQGIKSVVNLR-FFDRNDDDYLKQYGINIINR 97
>gi|270339928|ref|ZP_06006481.2| outer membrane protein [Prevotella bergensis DSM 17361]
gi|270333294|gb|EFA44080.1| outer membrane protein [Prevotella bergensis DSM 17361]
Length = 376
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 32/116 (27%), Gaps = 8/116 (6%)
Query: 68 IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
+ I +++ + + I + L + P +++ + D+
Sbjct: 266 VAKKIEPIRRDVFFTINKYAIRAAEQSKIDEIVSFLKENPDATVSVTGYADAGTGNNTIN 325
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYK-YPIDTNDTKVGRQNNQRIEIQI 182
+ I+ S I + P N+ N R+ I I
Sbjct: 326 DRLAAQRAASVVKAIKDKGISANRIKSDSKGARVQPFAENN------KN-RVSIMI 374
>gi|329960555|ref|ZP_08298922.1| OmpA family protein [Bacteroides fluxus YIT 12057]
gi|328532619|gb|EGF59409.1| OmpA family protein [Bacteroides fluxus YIT 12057]
Length = 409
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 57/142 (40%), Gaps = 6/142 (4%)
Query: 45 SSLDKAEDEFQMQ--LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
++K ++ + + + + +++ + + +K ++ IA I
Sbjct: 259 QYVEKIVEKVVEKPVIMEKVVQAPAHANVLCDLFNNIYFEFDKAEITEKSDAVIDQIARI 318
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
+ + I TD+ G+ + N+ +S+ RAD + + + + + RG K
Sbjct: 319 MLADTTKRYLITGCTDAKGSPQYNMGLSRRRADAVVN-ALLQKGVPEEMLKSRGVGKKIS 377
Query: 163 IDTND-TKVGRQNNQR--IEIQ 181
+ D + R+ +++ +EI
Sbjct: 378 YASQDASNEIREGDRKIIVEII 399
>gi|328469634|gb|EGF40570.1| putative outer membrane protein [Vibrio parahaemolyticus 10329]
Length = 282
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 11/154 (7%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+S + G+ IG+ + ++ V+E L + L
Sbjct: 136 SSGNGDRNSTNGQGYPLFGNSGIDGLDAYLIGEGNLRLVFENLFPVNEYELTQASKETLL 195
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ L P + I DS G+ N +++ RA ++ +L++ N I++RG
Sbjct: 196 QLIQKLKNLPVKELVIYGIADSSGSYAKNRVLADRRALAVRDFLVEE-GLRNVSIAIRG- 253
Query: 158 AYKYPIDTN--DTKVGRQNNQR--IEIQIFPRGN 187
N +T R +R I++++ G
Sbjct: 254 -----TVENGLETAEQRVKQRRFSIDVRLKSNGK 282
>gi|221271472|dbj|BAH15024.1| putative outer membrane protein [Vibrio parahaemolyticus]
Length = 282
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 11/154 (7%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+S + G+ IG+ + ++ V+E L + L
Sbjct: 136 SSGNGDRNSTNGQGYPLFGNSGIDGLDAYLIGEGNLRLVFENLFPVNEYELTQASKETLL 195
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ L P + I DS G+ N +++ RA ++ +L++ N I++RG
Sbjct: 196 QLIQKLKNLPVKELVIYGIADSSGSYAKNRVLADRRALAVRDFLVEE-GLRNVSIAIRG- 253
Query: 158 AYKYPIDTN--DTKVGRQNNQR--IEIQIFPRGN 187
N +T R +R I++++ G
Sbjct: 254 -----TVENGLETAEQRVKQRRFSIDVRLKSNGK 282
>gi|300919511|ref|ZP_07136009.1| OmpA family protein [Escherichia coli MS 115-1]
gi|300413405|gb|EFJ96715.1| OmpA family protein [Escherichia coli MS 115-1]
Length = 211
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 46 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 99
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 100 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 159
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 160 PQS--AGNRRIEIMVLTK 175
>gi|218674007|ref|ZP_03523676.1| hypothetical conserved membrane protein [Rhizobium etli GR56]
Length = 50
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 146 VSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
+ +G A P+ ND++ GR N+RIEI I R
Sbjct: 10 GVPTGQLKSQGRAATQPLAANDSREGRAANRRIEILIQKR 49
>gi|37676263|ref|NP_936659.1| outer membrane protein [Vibrio vulnificus YJ016]
gi|37200804|dbj|BAC96629.1| outer membrane protein [Vibrio vulnificus YJ016]
Length = 198
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 54/156 (34%), Gaps = 8/156 (5%)
Query: 27 KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
K + + + L++ + + Q + + +++
Sbjct: 50 KTTQSEGSIVVDEGQTEARVLNRDVQKVKAQNSSEHCFFDEKKMSLVLNYQHNKFGLTD- 108
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
+ + + I P+ I+++ H DS G+ N +S RA+ + +L +
Sbjct: 109 -IHQDAIRSYIGIVD-----PNRKISVEGHADSTGSDTYNKQLSARRANTVARFLKKDLG 162
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
NR + + F PI + N+R+ + +
Sbjct: 163 LGNRIVE-KAFGETTPICAAEENQQNGCNRRVVLTL 197
>gi|126665979|ref|ZP_01736959.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
gi|126629301|gb|EAZ99918.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
Length = 305
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 7/115 (6%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ + V L L + L T + + HTD G+ +N ++Q+
Sbjct: 181 LQGSQILFSSASVALSDADRRSLDKVVVYVLADSTVTKVLVDGHTDRRGSRIDNRKLAQD 240
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
RAD + + ++ I+VR + + N+R+ I++ G+
Sbjct: 241 RADAV-AGYLKSQGVEESRITVRAHGD-QFAASGNP----AQNRRVVIRMEREGD 289
>gi|108762481|ref|YP_632884.1| OmpA family protein [Myxococcus xanthus DK 1622]
gi|108466361|gb|ABF91546.1| OmpA family protein [Myxococcus xanthus DK 1622]
Length = 386
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 41/125 (32%), Gaps = 9/125 (7%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL----IATILNKF---PSTVIAIQSHT 117
V + + + L I L K+ S + + HT
Sbjct: 245 VDLYPWQVDIPHEEVNFASGQADIPATERGKLDKSHALIVDALTKYGRFASLRLYVMGHT 304
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
D++G NL +S RA + +Y ++G+ + G + P + N+R
Sbjct: 305 DTVGAAAENLDLSVRRAKSLAAYFRKKGLRVP--VYYEGLGEEAPAVATPDETAEAGNRR 362
Query: 178 IEIQI 182
E I
Sbjct: 363 AEYII 367
>gi|270157638|ref|ZP_06186295.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|269989663|gb|EEZ95917.1| conserved hypothetical protein [Legionella longbeachae D-4968]
Length = 230
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 56/185 (30%), Gaps = 31/185 (16%)
Query: 33 SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI---GDMITCYIPVHVSFVSEVFLE 89
T +V K F + Q + + I P + ++
Sbjct: 35 EQTTTLVVKEFEETKSDLAQALQKEFAKDLSQWNAELLGDMTIRFDNPDVLFDTGSSVVK 94
Query: 90 KKFLPMLQL-IATILN-------KFPSTVIAIQSHTDSIG--------TLKNNLLISQER 133
F +L I ++ + I I+ HT N+ +SQER
Sbjct: 95 PAFKRILNDFIPRYISLVSSEKYRNSIKEIRIEGHTSKKWALDTDEKTAYIKNMRLSQER 154
Query: 134 ADVIKSYL------IQRGVSSNRFISVRGFAYKYPIDTND---TKVGRQNNQRIEIQIFP 184
A + Y+ ++ ++++ GF+ P+ N R R+E I
Sbjct: 155 AQSMLEYILSLPSLLEHEKWMRKYLTSSGFSSSKPVF-NQLHIADDNRSQ--RVEFVIVT 211
Query: 185 RGNIK 189
+ K
Sbjct: 212 NADSK 216
>gi|162450403|ref|YP_001612770.1| hypothetical protein sce2131 [Sorangium cellulosum 'So ce 56']
gi|161160985|emb|CAN92290.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum 'So ce 56']
Length = 327
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 45/172 (26%), Gaps = 11/172 (6%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH 79
+ + + + D + + V+ + IP
Sbjct: 106 SSGLDVEPGATQPRGEPAGARPASERDSDVLRAFL--PVAAGDVTVAPRDGRVVISIPSR 163
Query: 80 VSFVSE-VFLEKKFLPMLQLIATILNKFPSTV--------IAIQSHTDSIGTLKNNLLIS 130
V F L +L+ IA I+ ++ ++
Sbjct: 164 VLFKGNRDALSPAGEKVLRDIAAIIRSNEPLKGLAYQVVGHTASGTPGVAWRNGWDVTVA 223
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
Q RA ++ + +S+ FA P D + R+EI I
Sbjct: 224 QARAVLLFLAQPKEAGVPLARLSLASFADLPPADAGGGAPAQPQEPRVEIVI 275
>gi|73746049|ref|YP_302641.1| conjugal transfer protein TrbH [Sphingomonas sp. A1]
gi|72534615|dbj|BAE19735.1| TrbH [Sphingomonas sp. A1]
Length = 153
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 8/80 (10%), Positives = 26/80 (32%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++++ ++ ++ +SGC + V + D + + L + +L+
Sbjct: 1 MRKITIAALLVLALSGCATTGQYGNFVPPTAAADQQQLAREAVQQLAVLYPPAKTRLELQ 60
Query: 62 GIVVSRIGDMITCYIPVHVS 81
G + +
Sbjct: 61 QATPDAFGQALVLTLRERGY 80
>gi|325923665|ref|ZP_08185290.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
gi|325545864|gb|EGD17093.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
Length = 404
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 68/180 (37%), Gaps = 15/180 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIP 77
R++ + KR + + ++ +++ D + I
Sbjct: 107 GRKRDNAADTTEDSRAKDKKRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIV 166
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
+ + L+ + +L+ +++ +N+ P+ I+I HTD+ + N +
Sbjct: 167 DKQNRPMFDIGRDQLKPYTVDILRELSSFINQVPN-HISITGHTDTTAYSSDAGYTNWEL 225
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
S +RA+ + L+ G++ + V G + + + T N+RI I + + +
Sbjct: 226 SADRANAARRALVGGGMADAKVTRVVGLSSS--VLFDKTNPQNPINRRISIVVMTQDAEQ 283
>gi|84622281|ref|YP_449653.1| flagellar motor protein MotB [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84366221|dbj|BAE67379.1| chemotaxis MotB protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 385
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 66/177 (37%), Gaps = 15/177 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIP 77
R++ + KR + + + ++ +++ D + I
Sbjct: 107 GRKRDNAADTTEDSRSKDKKRLETLMQELKEAIDKSQALEPFKDQLLLDLTPDGLRIQIV 166
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
+ + L+ + +L ++ +N+ P+ I+I HTD+ + N +
Sbjct: 167 DKQNRPMFDIGRDQLKPYTVEILHELSNFINQVPN-HISITGHTDTTAYSSDAGYTNWEL 225
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +RA+ + L+ G+S + V G + + + T N+RI I + +
Sbjct: 226 SADRANAARRALVGGGMSDAKVTRVVGLSSS--VLFDKTDPQNPINRRISIVVMTQD 280
>gi|300991173|ref|ZP_07179516.1| OmpA family protein [Escherichia coli MS 200-1]
gi|300305611|gb|EFJ60131.1| OmpA family protein [Escherichia coli MS 200-1]
gi|324015565|gb|EGB84784.1| OmpA family protein [Escherichia coli MS 60-1]
Length = 211
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 46 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 99
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ N+ + V A + +D +
Sbjct: 100 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMADQMLLDAKN 159
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 160 PQS--AGNRRIEIMVLTK 175
>gi|296280733|gb|ADH04664.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 19/166 (11%), Positives = 48/166 (28%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V + K + F + +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPTVPGLPQYDGCPKPQSAFAAEATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 QGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|124516388|gb|EAY57896.1| putative outer membrane protein, OmpA/MotB family [Leptospirillum
rubarum]
Length = 232
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 70/204 (34%), Gaps = 24/204 (11%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSN---DTDIVNKRFGSSLDKAEDEFQMQL- 58
+ LS+ T+SGC + +K + IV+ S + + E Q+
Sbjct: 12 RRTLLSVLFFLTLSGCAHQNGQKSLAPGPDDSNRLPGIIVSGHSRSFHPQQKVESSPQIY 71
Query: 59 ----QDTGIVVSRIGDMI-----------TCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ + V++ + + + L +L + +L
Sbjct: 72 SSPPKTAPVQVAKTTRPVAKPTRSAPAKKLPLQKDIYFSFNSKKISYANLSVLHAYSRLL 131
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY---- 159
K P + + HTD +G+ + N + ERA + L+ GV + R V
Sbjct: 132 RKNPRLALRLYGHTDPVGSSRFNHKLGLERALAARRVLLATGVPAKRIF-VFSEGKKMSR 190
Query: 160 KYPIDTNDTKVGRQNNQRIEIQIF 183
++P V ++ + I++
Sbjct: 191 EFPECKKPNPVCYARDRAVRIKVV 214
>gi|50235065|gb|AAT70735.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 19/166 (11%), Positives = 48/166 (28%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V + K + F + +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPTVPGLPQYDGCPKPQSAFAAEATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 QGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|300902537|ref|ZP_07120514.1| OmpA family protein [Escherichia coli MS 84-1]
gi|301302019|ref|ZP_07208152.1| OmpA family protein [Escherichia coli MS 124-1]
gi|300405350|gb|EFJ88888.1| OmpA family protein [Escherichia coli MS 84-1]
gi|300842571|gb|EFK70331.1| OmpA family protein [Escherichia coli MS 124-1]
gi|315253712|gb|EFU33680.1| OmpA family protein [Escherichia coli MS 85-1]
Length = 211
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 46 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 99
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 100 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 159
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 160 PQS--AGNRRIEIMVLTK 175
>gi|300977371|ref|ZP_07173862.1| OmpA family protein [Escherichia coli MS 45-1]
gi|301045873|ref|ZP_07193060.1| OmpA family protein [Escherichia coli MS 185-1]
gi|300302123|gb|EFJ58508.1| OmpA family protein [Escherichia coli MS 185-1]
gi|300409896|gb|EFJ93434.1| OmpA family protein [Escherichia coli MS 45-1]
gi|315295164|gb|EFU54499.1| OmpA family protein [Escherichia coli MS 153-1]
gi|315300866|gb|EFU60088.1| OmpA family protein [Escherichia coli MS 16-3]
gi|324010200|gb|EGB79419.1| OmpA family protein [Escherichia coli MS 57-2]
Length = 211
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 46 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 99
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 100 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 159
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 160 PQS--AGNRRIEIMVLTK 175
>gi|313500679|gb|ADR62045.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 217
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 48/138 (34%), Gaps = 9/138 (6%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
++ + + + +L +I I S + +L A
Sbjct: 75 AAAEADANGSRQELLAIRARQDQIQTSINHMTLNFAFGHSRFSPSAEDGDVLVRSAQD-- 132
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG-FAYKYPI 163
+ + I TDS+GT++ N ++ RA + R IS G I
Sbjct: 133 ---ALQVKIVGFTDSVGTVEANRRVALLRAQAA-KMYLVRRGVPAAKISAEGQEGDY--I 186
Query: 164 DTNDTKVGRQNNQRIEIQ 181
NDT GR N+R+E +
Sbjct: 187 AANDTPAGRAANRRVEFE 204
>gi|308126360|ref|ZP_07663727.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ4037]
gi|308109365|gb|EFO46905.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ4037]
Length = 161
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-----LKNNLLISQERA 134
+ L F +L +A + + + +I I HTD+I ++N +S RA
Sbjct: 1 MFSRGGAELTPFFEDLLLALAPLFEQVTNPLI-ISGHTDAIPFKKRFGRQSNWALSASRA 59
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
DV + L++ G+ +R + V G + + + N + N+RIE+ I
Sbjct: 60 DVARKTLVEGGMPDDRVMQVTGMSDRALL--NPDEPDSSENRRIELFIL 106
>gi|238782805|ref|ZP_04626834.1| Flagellar motor protein [Yersinia bercovieri ATCC 43970]
gi|238716228|gb|EEQ08211.1| Flagellar motor protein [Yersinia bercovieri ATCC 43970]
Length = 296
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 64/148 (43%), Gaps = 13/148 (8%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
L + ++ L + G+++ + + V LE +LQ + +LN
Sbjct: 98 LSNYKSNLRLSLTEDGLLIQ-----VIDSQERPMFKVGSKELEPYMRGILQALVPVLNDL 152
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTDS+ + +N +S +RA+ + L+ G++ N+F+ V G A
Sbjct: 153 PN-KISLTGHTDSLPYARGEVGYSNWELSADRANASRQTLVAGGLAENKFLRVIGTANMM 211
Query: 162 PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
++ N+RI I + + K
Sbjct: 212 NLENVRPDD--PINRRISILVLSKNKEK 237
>gi|218698824|ref|YP_002406453.1| hypothetical protein ECIAI39_0419 [Escherichia coli IAI39]
gi|218368810|emb|CAR16558.1| flagellar system protein [Escherichia coli IAI39]
Length = 261
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 55/138 (39%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L A + +
Sbjct: 96 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVEFAPVFDSL-DNK 149
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 150 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 209
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 210 PQS--AGNRRIEIMVLTK 225
>gi|167374413|gb|ABZ79136.1| outer membrane protein [Riemerella anatipestifer]
Length = 338
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 49/166 (29%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V + + K + E+ +
Sbjct: 186 GCPWPDTDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGA--------------L 231
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 232 QGIFFHFNKSSIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 291
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ S + +G + + R ++++ ++
Sbjct: 292 VVA-ALEARGVSPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 336
>gi|50235099|gb|AAT70752.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 49/166 (29%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V + + K + E+ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 QGIFFHFNKSSIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ S + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVSPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|50235103|gb|AAT70754.1| OmpA [Riemerella anatipestifer]
gi|50235105|gb|AAT70755.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 49/166 (29%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V + + K + E+ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 QGIFFHFNKSSIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ S + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVSPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|50235107|gb|AAT70756.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 49/166 (29%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V + + K + E+ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 QGIFFHFNKSSIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ S + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVSPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|300871117|ref|YP_003785989.1| hypothetical protein BP951000_1505 [Brachyspira pilosicoli 95/1000]
gi|300688817|gb|ADK31488.1| hypothetical protein BP951000_1505 [Brachyspira pilosicoli 95/1000]
Length = 197
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 22/172 (12%)
Query: 35 DTDIVNKRFGSSLDKAEDEFQMQLQDTGIV--VSRIGDMITCYIPVHVSFVSEVFL--EK 90
+ ++ + + ++ E+ +T V V + + F S +
Sbjct: 16 QSAVIISKDSNEVNNKENITNEITTNTNSVYYVQNTKRGKLLILKDPILFDSNSSVVNTN 75
Query: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
K+ L ++ +L I I+ H DS N + + +
Sbjct: 76 KYAETLDYLSLVLKSTNILNIYIEGHIDSSEVRYMNKNTVYNLSTTNNILYLYDRNNEVD 135
Query: 151 FISVRGFAYKYPIDTND---------------TKVGRQNNQRIEIQIFPRGN 187
+R A + ND T N+R+E I N
Sbjct: 136 LSYLRSLAVGDLLTDNDNKLKAIGLQNLIDYGTPE---QNRRVEFVIIENSN 184
>gi|160901602|ref|YP_001567183.1| OmpA/MotB domain-containing protein [Petrotoga mobilis SJ95]
gi|160359246|gb|ABX30860.1| OmpA/MotB domain protein [Petrotoga mobilis SJ95]
Length = 290
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/160 (13%), Positives = 44/160 (27%), Gaps = 16/160 (10%)
Query: 2 IKELGLSMFIMTTISGCGLASREKK-----KVFLHKSNDTDIVNKRFGSS---------- 46
+ L L+MFI + ++ + +V R S
Sbjct: 21 MTTLLLTMFIALFSMATISPGKFQQAVVSLQNVFEGQPIGVLVGGRSISDEPLITSNPGI 80
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNK 105
+ + + I + + F L + +L I TI+ +
Sbjct: 81 RQELLKIIEDEKYKGKITIEETDKGTIISMRDIAFFRPGSAELTAEAKDLLYRIGTIILE 140
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRG 145
S I + TD L +++ S ++ +
Sbjct: 141 HTSNAIEVYGFTDDQPVLPSSVYPSNWHLSAARAASVVNF 180
>gi|323528823|ref|YP_004230975.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323385825|gb|ADX57915.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 242
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 49/176 (27%), Gaps = 12/176 (6%)
Query: 18 CGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
CG + D + E +TG V + + +
Sbjct: 64 CGDKPVQVIDRIDVVRTADDQRSDPRVLHFKCGEAPSNKAPAETGAVAPQTATLENFSLE 123
Query: 78 VHVSFV-SEVF---LEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQE 132
F + + L IA + + + + HTD +G N +S
Sbjct: 124 SDALFPFGKSSPESMLPAAKARLDEIAARIRQHEHVSAVTVVGHTDRLGPESINGPLSLA 183
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ------NNQRIEIQI 182
RA+ ++ YL+ I +G P R ++ + I +
Sbjct: 184 RANTVRDYLVA-HGLDGSIIHAKGVGSSEPRTHCAEGDARALIACLQQDRYVSITV 238
>gi|50235093|gb|AAT70749.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V + + K E+ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPSVPGLPEYNGCPKPRSEYAKDATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 QGIFFHFNKSSIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ S + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVSPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|262066774|ref|ZP_06026386.1| putative chemotaxis protein MotB [Fusobacterium periodonticum ATCC
33693]
gi|291379577|gb|EFE87095.1| putative chemotaxis protein MotB [Fusobacterium periodonticum ATCC
33693]
Length = 232
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 16/145 (11%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQL---IATILNKFPS 108
+ Q ++ GI V T I + F E L+ + L I L
Sbjct: 68 KIQKDFEERGIKVDLDPQTGTIKIDDKILFNTGEYLLKPEGKKYLNEFVPIYINLLLNDE 127
Query: 109 ------TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN------RFISVRG 156
+ I I+ HTD +G+ N+ +SQ+RA + Y+ + +I+ G
Sbjct: 128 QVKKELSQIIIEGHTDDVGSYIYNMELSQKRAFEVIKYIYDEMPNFKGKEELKSYITANG 187
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ + + R ++R+E Q
Sbjct: 188 RSNIKVLRDESGNIDRDKSRRVEFQ 212
>gi|153827984|ref|ZP_01980651.1| putative OmpA domain protein [Vibrio cholerae 623-39]
gi|148876565|gb|EDL74700.1| putative OmpA domain protein [Vibrio cholerae 623-39]
Length = 282
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 11/151 (7%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+S ++ G+ IG+ + ++ V+E L + L +
Sbjct: 139 NGDKNSTNRQGYPLIGDSGIDGLDAYLIGEKNLRLVFENLFPVNEFELTQASKETLLQLI 198
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
LNK P + I DS G N +++ RA ++++LI+ GV R IS+
Sbjct: 199 QKLNKLPVKELVIYGVADSSGLYAKNRVLADRRALAVRNFLIEEGV---RGISIMTRGS- 254
Query: 161 YPIDTN--DTKVGRQNNQR--IEIQIFPRGN 187
N +T R +R I++++ G
Sbjct: 255 ---VENGLETAEQRVKQRRFSIDVRLKNNGK 282
>gi|153215426|ref|ZP_01950010.1| hypothetical protein A55_B0269 [Vibrio cholerae 1587]
gi|124114720|gb|EAY33540.1| hypothetical protein A55_B0269 [Vibrio cholerae 1587]
Length = 275
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 11/151 (7%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
+S ++ G+ IG+ + ++ V+E L + L +
Sbjct: 132 NGDKNSTNRQGYPLIGDSGIDGLDAYLIGEKNLRLVFENLFPVNEFELTQASKETLLQLI 191
Query: 101 TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
LNK P + I DS G N +++ RA ++++LI+ GV R IS+
Sbjct: 192 QKLNKLPVKELVIYGVADSSGLYAKNRVLADRRALAVRNFLIEEGV---RGISIMTRGS- 247
Query: 161 YPIDTN--DTKVGRQNNQR--IEIQIFPRGN 187
N +T R +R I++++ G
Sbjct: 248 ---VENGLETAEQRVKQRRFSIDVRLKNNGK 275
>gi|237798775|ref|ZP_04587236.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021628|gb|EGI01685.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 48
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 6/26 (23%), Positives = 13/26 (50%)
Query: 157 FAYKYPIDTNDTKVGRQNNQRIEIQI 182
+YP+ N + R N+R+ + +
Sbjct: 1 HGERYPLAPNTNEANRARNRRVNVHL 26
>gi|126728677|ref|ZP_01744492.1| Outer membrane protein, OmpA/MotB family [Sagittula stellata E-37]
gi|126710607|gb|EBA09658.1| Outer membrane protein, OmpA/MotB family [Sagittula stellata E-37]
Length = 703
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILN----KFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + L + L K PS V I+ HTD++G NL +
Sbjct: 584 VSVDTINFETNSAAIRPDEAQELAALGNALKAFIDKNPSEVFLIEGHTDAVGNYAYNLAL 643
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
S RA+ + L + + ++G+ +
Sbjct: 644 SDRRAESVALALTEYFKVPPENMVLQGYGESDLLVP 679
>gi|320324886|gb|EFW80958.1| ompA family protein [Pseudomonas syringae pv. glycinea str. B076]
Length = 240
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + + + + + L+ + + L
Sbjct: 126 ASAQQQGRWLEDQILS--LATTETDRGLVMTLGDVLFDAGHAELKSSASRTILKVVQFLQ 183
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
P V+ I+ +TDS G + NL +S++RA + L+ N ++S
Sbjct: 184 INPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLMTWVSMKNVYMS 232
>gi|317481533|ref|ZP_07940589.1| OmpA family protein [Bacteroides sp. 4_1_36]
gi|316902303|gb|EFV24201.1| OmpA family protein [Bacteroides sp. 4_1_36]
Length = 170
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 42/130 (32%), Gaps = 9/130 (6%)
Query: 37 DIVNKRFGSSLDKAEDEFQM------QLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLE 89
D VN + L + V + + P + F L+
Sbjct: 24 DAVNAEINRYRSELAQAQADLANCKNALANAKPEVKEVTKEVEVAGPRAIFFKIGSARLD 83
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSS 148
++L A IL P + + D G+ N +S++RA V+ LI +
Sbjct: 84 DYGKVNIELAAKILKANPDKKYKVAGYADKATGSASWNQKLSEKRAQVVYDALIAQ-GVD 142
Query: 149 NRFISVRGFA 158
+ + GF
Sbjct: 143 KDQLELVGFG 152
>gi|224418158|ref|ZP_03656164.1| hypothetical protein HcanM9_02663 [Helicobacter canadensis MIT
98-5491]
gi|253827485|ref|ZP_04870370.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253510891|gb|EES89550.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 263
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/220 (11%), Positives = 64/220 (29%), Gaps = 38/220 (17%)
Query: 1 MIKELGLSMFIMTT--ISGCGLASRE---KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M+ + + ++ + +E + L + V K + + +
Sbjct: 17 MMAGVMMIFLLVAVGYMVVISKTQKELALQNAELLALNKQMSDVAKTHQNLQTELYKDLV 76
Query: 56 MQLQDT----GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI---LNKFPS 108
+ + + + P + E ++ +F +L + P
Sbjct: 77 AEFSKDLGKWNAEID-EDNTVRFREPDILFDQGEKEVKSRFKEILDDFFPRYIKILSRPQ 135
Query: 109 TV-----IAIQSHTDSIGTLKNNLLI--------SQERADVIKSYLIQRGVSSNR----- 150
I I+ HT +L SQ RA + Y + +
Sbjct: 136 YKEDIEEIRIEGHTSKEWKNAKSLEDRYLGNAELSQARALEVLKYCFNNQQIAKQKEWLV 195
Query: 151 -FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ G ++ P+ + ++R+E ++ + N K
Sbjct: 196 SVLRANGLSFAKPL------ESAELSRRVEFKVLTKSNQK 229
>gi|83858208|ref|ZP_00951730.1| chemotaxis MotB protein [Oceanicaulis alexandrii HTCC2633]
gi|83853031|gb|EAP90883.1| chemotaxis MotB protein [Oceanicaulis alexandrii HTCC2633]
Length = 303
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 65/182 (35%), Gaps = 18/182 (9%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG--------IVVSRIGDM 71
+ + V +R + AE + LQD +++ +
Sbjct: 116 ASGAAGGQPEASSDALASAVARREAAQFASAEQSLRQALQDMPELAELSRHVLIEETPEG 175
Query: 72 ITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK--- 124
+ + + + + +L+ I+ I+ + P+ I I HTD+
Sbjct: 176 LRIQLIDQEGRPMFEPGAIEPNSRARVLLRTISEIVLRLPN-RITISGHTDASPAPVGGV 234
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+N +S RA+ + + + G+ +R VRG A P+ +D N+R+ I +
Sbjct: 235 SNWELSSARANAALNIMTEAGIPDHRIAEVRGKAGAEPLFPDDPY--LPGNRRLSITLLR 292
Query: 185 RG 186
Sbjct: 293 EA 294
>gi|237510234|ref|ZP_04522949.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
gi|235002439|gb|EEP51863.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
Length = 230
Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 67/208 (32%), Gaps = 30/208 (14%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
GL M M + L + + + + T + + EF L+
Sbjct: 19 TGLMMVFMLLTAAFMLRVEQTTTLVVKEYETTKRDMQLA------LQKEFAKDLKQWNAE 72
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI----ATIL--NKFPSTV--IAIQSH 116
+ I P + L +F +L +L ++ V I I+ H
Sbjct: 73 I-LGDMTIRFNDPTVLFATGSSELRPRFKQVLGQFFPRYVALLTSAQYKDAVKEIRIEGH 131
Query: 117 TDSIGT--------LKNNLLISQERADVIKSYLIQRGVSSN------RFISVRGFAYKYP 162
T ++ T N+ +SQ R YL+ + ++ G + P
Sbjct: 132 TSALWTGTTDEKIAYFRNMELSQARTRSALEYLLSLPAVQGNEKWLVQHVTANGLSSSRP 191
Query: 163 ID-TNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + + + NQR+E +I + K
Sbjct: 192 LAQDSQSSASQIANQRVEFRIVTNASEK 219
>gi|320329251|gb|EFW85248.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330880852|gb|EGH15001.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 240
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S + + Q+ + + + + + L+ + + L
Sbjct: 126 ASAQQQGRWLEDQILS--LATTETDRGLVMTLGDVLFDAGHAELKSSASRTILKVVQFLQ 183
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
P V+ I+ +TDS G + NL +S++RA + L+ N ++S
Sbjct: 184 INPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLMTWVSMKNVYMS 232
>gi|317406287|gb|EFV86528.1| OmpA/MotB domain-containing protein [Achromobacter xylosoxidans
C54]
Length = 240
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 3/125 (2%)
Query: 32 KSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI---TCYIPVHVSFVSEVFL 88
+ ++ S+ + + + + + + V L
Sbjct: 110 GEVQNEASRQQIASTFATSLNPTYKIVNGLRVAAGKDEQGLLDKVLTNRVVEFETGSATL 169
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
+ +L +A ++ K S + I HTDS G+ NL +SQ RAD +++YL+ +G+
Sbjct: 170 TARGRELLDQVADVIPKLHSDKVQIIGHTDSSGSRSTNLALSQARADAVRAYLVDKGLPP 229
Query: 149 NRFIS 153
RF +
Sbjct: 230 GRFET 234
>gi|50235095|gb|AAT70750.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V + + K + E+
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGA--------------F 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 QGIFFHFNKSSIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ S + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVSPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|315123361|ref|YP_004065367.1| hypothetical protein PSM_B0421 [Pseudoalteromonas sp. SM9913]
gi|315017121|gb|ADT70458.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
Length = 202
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 48/172 (27%), Gaps = 8/172 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV--NKRFGSSLDKAEDEFQMQLQ 59
+K L L + + ISGC A + + + + D + + L + L
Sbjct: 1 MKALFLLLTGVIFISGCSSAIQTTIQYYQFEQPINDSSRNVQDTQAQLRVQTVTLRGALN 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML---QLIATILNKFP---STVIAI 113
+ GI + + I +V L L ++ P
Sbjct: 61 NRGIAMKVDSNQIHAANYHLWGESPDVMLSASAQQTLFNTMTNWMVIKGLPVITDQQQQT 120
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+ N L + S R +S+ F+ PI+
Sbjct: 121 FYELEYELHHFNGDLQGNADISGLWRLYYTHPESGRRLLSIHNFSSVMPIND 172
>gi|313141693|ref|ZP_07803886.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313130724|gb|EFR48341.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 241
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 49/164 (29%), Gaps = 29/164 (17%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI---LN 104
EF L + + + P + E ++ +F +L +
Sbjct: 51 KDLVAEFSKDLGKWNAEID-EDNTVRFREPDILFDQGEKEVKSRFKEILDDFFPRYIKIL 109
Query: 105 KFPSTV-----IAIQSHTDSIGTLKNNLLI--------SQERADVIKSYLIQRGVSSNR- 150
P I I+ HT +L SQ RA + Y + +
Sbjct: 110 SRPQYKEDIEEIRIEGHTSKEWKNAKSLEDRYLGNAELSQARALEVLKYCFNNQQIAKQK 169
Query: 151 -----FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ G ++ P+ + ++R+E ++ + N K
Sbjct: 170 EWLVSVLRANGLSFAKPL------ESAELSRRVEFKVLTKSNQK 207
>gi|198275751|ref|ZP_03208282.1| hypothetical protein BACPLE_01926 [Bacteroides plebeius DSM 17135]
gi|198271380|gb|EDY95650.1| hypothetical protein BACPLE_01926 [Bacteroides plebeius DSM 17135]
Length = 358
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 62/164 (37%), Gaps = 13/164 (7%)
Query: 8 SMFIMTTISGCGLASREKKKVFL--HKSNDTDIVNKR------FGSSLDKAEDEFQMQLQ 59
+ +G +E+ K + + ++V + ++L K + + +
Sbjct: 173 AALSGYLTAGITYTFKEQFKGASKNISAAEMELVQSQLKSMHEENANLRKQVNTLEEEKN 232
Query: 60 DTGIVVS---RIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ +V + + + + F ++ +L K L+ A ++ K+P I
Sbjct: 233 NRPVVTAAAPENENRLADAVEYVAFFDINKAYLSDKEAVNLEAYANLIKKYPENKFVITG 292
Query: 116 HTD-SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ D GT + N +S+ RA+ + + L+ + +++
Sbjct: 293 YADKQTGTAEFNERLSKLRAEAVYNTLVDKYGVDKNQLTMEYRG 336
>gi|319794930|ref|YP_004156570.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315597393|gb|ADU38459.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 402
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
P F+ + + + L+ IA + + + + HT G+ N +S +RA
Sbjct: 292 PGSTDFLGDPKISAAYPMWLRQIARQAAQI-DSCVVVTGHTSRTGSESVNERLSLQRAVS 350
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQRIEIQIF 183
+KS L+ + + G ++ I T ++R+E ++
Sbjct: 351 VKSKLVTEAPPLAKKLRESGMGFRENIVGTGADDASDALDRRVEFKVV 398
>gi|218659387|ref|ZP_03515317.1| hypothetical conserved membrane protein [Rhizobium etli IE4771]
Length = 198
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 42/137 (30%), Gaps = 1/137 (0%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
G AS T G + T ++ D
Sbjct: 46 GSTQASSNPGASANVAKEATVEAGPTPGQGPVETSPTTAAATITTPQTYWKLPDDDQVNY 105
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V +F + K PMLQ + +++ + +I I HTD+ G + N +S RA
Sbjct: 106 RVQFAF-DSSAIAPKEKPMLQKLCSVVKEMDIKLIRIVGHTDASGGARYNQNLSTLRARE 164
Query: 137 IKSYLIQRGVSSNRFIS 153
+ + + +
Sbjct: 165 VARFFTEDCQIPRERLE 181
>gi|50235081|gb|AAT70743.1| OmpA [Riemerella anatipestifer]
gi|50235097|gb|AAT70751.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/181 (12%), Positives = 53/181 (29%), Gaps = 17/181 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSS-----------LDKAED----EFQMQLQDT 61
GC + V ++ + LDK + +
Sbjct: 180 GCPWPDTDNDGVLDKDDACPEVAGPAENNGGPWPDTDNDGVLDKDDKCPSVPGLPEYNGC 239
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
S T + ++ + + L A ++ + HTD G
Sbjct: 240 PKPRSEYAKDATGALQGIFFHFNKSSIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKG 299
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEI 180
NL +S+ERA + + ++ S + +G + + R ++++ +
Sbjct: 300 NANYNLKLSRERAASVVA-ALEARGVSPSQLKSKGVGSAEATVPASASNEERMKDRKVVV 358
Query: 181 Q 181
+
Sbjct: 359 E 359
>gi|124262903|ref|YP_001023373.1| outer membrane protein [Methylibium petroleiphilum PM1]
gi|124262149|gb|ABM97138.1| outer membrane protein [Methylibium petroleiphilum PM1]
Length = 217
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
+ + H DS G+ NL +S+ RA + + S + + G + ID D
Sbjct: 145 LRLTGHADSQGSDLYNLRLSERRARAVSKVFLGA-GISADRLEIEGRGERDLIDLADG-- 201
Query: 171 GRQNNQRIEIQIF 183
N+R+EI++
Sbjct: 202 --AKNRRVEIRLV 212
>gi|239816686|ref|YP_002945596.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
gi|239803263|gb|ACS20330.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
Length = 401
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
P F+++ + + L+ IA + + + + HT G+ N +S +RA
Sbjct: 291 PGSTDFLADPKISAAYPMWLRQIARQAAQI-DSCVVVTGHTSRTGSESVNERLSLQRALS 349
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPID-TNDTKVGRQNNQRIEIQIFP 184
+K+ L+ ++ + G ++ I T ++R+E ++ P
Sbjct: 350 VKTRLVGEAPPLSKKLRESGMGFRENIVGTGADDASDALDRRVEFKVAP 398
>gi|30061847|ref|NP_836018.1| hypothetical protein S0298 [Shigella flexneri 2a str. 2457T]
gi|56479639|ref|NP_706230.2| hypothetical protein SF0277 [Shigella flexneri 2a str. 301]
gi|110804360|ref|YP_687879.1| hypothetical protein SFV_0301 [Shigella flexneri 5 str. 8401]
gi|30040091|gb|AAP15824.1| putative motility protein [Shigella flexneri 2a str. 2457T]
gi|56383190|gb|AAN41937.2| putative motility protein [Shigella flexneri 2a str. 301]
gi|110613908|gb|ABF02575.1| putative motility protein [Shigella flexneri 5 str. 8401]
gi|281599639|gb|ADA72623.1| putative motility protein [Shigella flexneri 2002017]
Length = 261
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + + +
Sbjct: 96 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSLYN-K 149
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 150 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 209
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 210 PQS--AGNRRIEIMVLTK 225
>gi|300867579|ref|ZP_07112229.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300334467|emb|CBN57399.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 982
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 59/166 (35%), Gaps = 12/166 (7%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
++KV + + ++ S+ Q+ V+S + V
Sbjct: 828 ERKVTVEGTVMQMTDAQKIAQSMK--------QVPGVQSVISTVKLNPLKITTRIYFNVG 879
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
L ++ ++ I L ++P + I H+D G L N ++++RA+ + + +
Sbjct: 880 SATLNSEYGEVIGNIKEFLKQYPQKHLKIIGHSDRKGNLAINQQLARKRAEAV-RVALVQ 938
Query: 145 GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ-IFPRGNIK 189
R + V A P ++ ++ + + I R K
Sbjct: 939 QGVDPRRLQVV--ASLNPPADVESSQPLLLSRCVIFEPITQRAKTK 982
>gi|313646638|gb|EFS11097.1| lateral flagellar motor protein B [Shigella flexneri 2a str. 2457T]
gi|332761628|gb|EGJ91908.1| lateral flagellar motor protein B [Shigella flexneri 4343-70]
gi|332761679|gb|EGJ91958.1| lateral flagellar motor protein B [Shigella flexneri 2747-71]
gi|332764445|gb|EGJ94678.1| lateral flagellar motor protein B [Shigella flexneri K-671]
gi|332768577|gb|EGJ98759.1| ompA family protein [Shigella flexneri 2930-71]
gi|333008733|gb|EGK28197.1| lateral flagellar motor protein B [Shigella flexneri K-218]
gi|333009709|gb|EGK29159.1| lateral flagellar motor protein B [Shigella flexneri VA-6]
gi|333022107|gb|EGK41350.1| lateral flagellar motor protein B [Shigella flexneri K-304]
Length = 256
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + + +
Sbjct: 91 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSLYN-K 144
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 145 IIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 204
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 205 PQS--AGNRRIEIMVLTK 220
>gi|187926231|ref|YP_001892576.1| OmpA/MotB domain protein [Ralstonia pickettii 12J]
gi|241665719|ref|YP_002984078.1| flagellar motor protein MotB [Ralstonia pickettii 12D]
gi|187727985|gb|ACD29149.1| OmpA/MotB domain protein [Ralstonia pickettii 12J]
gi|240867746|gb|ACS65406.1| OmpA/MotB domain protein [Ralstonia pickettii 12D]
Length = 315
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 65/174 (37%), Gaps = 11/174 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFG--SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
+ +++ + +D +NK + + + I ++ G I
Sbjct: 100 SPSPTVQRQRNIRDESDDAALNKLKQKIAEMVETNPVMSQFKHQLLIDMTTEGLRIQIVD 159
Query: 77 PVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN----LLIS 130
+ + + ++ +L+ + T LN P+ I++ HTD+ + +S
Sbjct: 160 QQNRPMFANASAEVQPYMRTILRELGTALNDVPN-PISLSGHTDATQYATQHGYSNWELS 218
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+RA+ + L+ G+ + V G P+D T + N+RI I +
Sbjct: 219 ADRANASRRELVAGGMKPEKVSRVVGLEASVPLD--KTNIYNPINRRISIVVLN 270
>gi|91794978|ref|YP_564629.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91716980|gb|ABE56906.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 330
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 60/185 (32%), Gaps = 20/185 (10%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF----------QMQLQDTGIVV 65
+G + + + N D Q I V
Sbjct: 107 AGPAMHNNIPAGEEEPNAGQGPEFNAMVPGQYDTQAQLVMLARQLNHVVQQSSMADNIAV 166
Query: 66 SRIGDMITCYIPVHV----SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + I I ++ ++ F +L + +L + + ++ I HTDS
Sbjct: 167 TLVPQGIRILIHDNIDRFMFTRGSAQMQVYFEDLLLALGPVLGQVTNAMV-ISGHTDSTP 225
Query: 122 T---LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
N +S +RA + + L GV N+ I V G A + + + N+RI
Sbjct: 226 YVGTEFTNWELSSKRALLARRVLEFGGVKRNQVIQVTGMADQ--VAYIPQEPAAAANRRI 283
Query: 179 EIQIF 183
E+ I
Sbjct: 284 EVLIL 288
>gi|218679468|ref|ZP_03527365.1| OmpA/MotB domain protein [Rhizobium etli CIAT 894]
Length = 33
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 161 YPIDTNDTKVGRQNNQRIEIQIFP 184
P+ +N ++ GR N+R+EIQI P
Sbjct: 6 QPVASNASEAGRAQNRRVEIQIAP 29
>gi|213583424|ref|ZP_03365250.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 142
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 87 FLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYL 141
+E +L+ IA +LN P+ I++ HTD +N +S +RA+ + L
Sbjct: 1 EVEPYMRDILRAIAPVLNGIPN-RISLAGHTDDFPYANGEKGYSNWELSADRANASRREL 59
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ G+ + + + V G A + N+RI + + + +
Sbjct: 60 VAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNKQAEQ 105
>gi|303229266|ref|ZP_07316061.1| conserved domain protein [Veillonella atypica ACS-134-V-Col7a]
gi|302516039|gb|EFL57986.1| conserved domain protein [Veillonella atypica ACS-134-V-Col7a]
Length = 55
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+S+ R + YL+ GV +NR I + P+ TN T G+ N+R+++ I
Sbjct: 1 MSERRVQDVAQYLVNNGVDANRLIGIA-NGDAKPVATNATANGKAENRRVDVFI 53
>gi|51894108|ref|YP_076799.1| flagellar motor protein MotB [Symbiobacterium thermophilum IAM
14863]
gi|51857797|dbj|BAD41955.1| flagellar motor protein MotB [Symbiobacterium thermophilum IAM
14863]
Length = 300
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 18/167 (10%), Positives = 44/167 (26%), Gaps = 17/167 (10%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ--LQDTGIVVSRIGDMITCYIPVHVSF 82
+ + ++ + + + F+ ++ + V+ I + + F
Sbjct: 145 EPEPAPVPASPRVTAPVAEPDEMAEVAEVFRAMPGVKTGLLSVALEERGIVLSVAGSLLF 204
Query: 83 -VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL--KNNLLISQERADVIKS 139
E + + P L IA L I + D+ ++ RA +
Sbjct: 205 EPGEYTIRPEAYPTLNEIADKLAGV-ELPIMVNGTADASHAAGSAEAFELAALRAGAVVR 263
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
Y + G+ R+ I + +
Sbjct: 264 YFTETYGLPGGNFVYFGYGDGQSASD-----------RVTIVVARKA 299
>gi|124514981|gb|EAY56492.1| putative Outer membrane protein, OmpAfamily [Leptospirillum
rubarum]
Length = 521
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 37/112 (33%), Gaps = 5/112 (4%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ L ++ +L+ A +L ++P I + H+D G N + +R
Sbjct: 82 LSRKDLSFATGKADLNQRDRRILREDAVLLKRYPKVEILLIGHSDERGNQIYNFRLGLDR 141
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYK----YPIDTNDTKVGRQNNQRIEIQ 181
++ + I V F + + + + ++ + +
Sbjct: 142 GKSA-RQFLESLGIAASRIHVVSFGKRAIPGRLLCARHRESCWRRHRIVHVV 192
>gi|319406989|emb|CBI80626.1| putative flagellar motor protein MotB [Bartonella sp. 1-1C]
Length = 384
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 64/168 (38%), Gaps = 10/168 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH-- 79
+K+K + +S + ++ + D + + D V I + + +
Sbjct: 185 KDQKQKTLVKESIQENNSSENSRVLAKELTDLIEAKNSDILAHVKPIKEGVMIELMDQPK 244
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERA 134
+ V + + ++ +A I+ K+ + I HTD+ +N +S RA
Sbjct: 245 YEMFKVGLSVPTARTVDLISSMAGIIAKYQG-DVVISGHTDARPYRSTVYDNWQLSTARA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L++ G R + V G+A + + + N+RI I I
Sbjct: 304 QMAYYMLVRGGFDEKRILRVEGYADRDLKNKKNPYA--AENRRISIFI 349
>gi|166713570|ref|ZP_02244777.1| flagellar motor protein MotB [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 385
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 66/177 (37%), Gaps = 15/177 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIP 77
R++ + KR + + + ++ +++ D + I
Sbjct: 107 GRKRDNAADTTEDSRSKDKKRLETLMQELKEAIDKSQALEPFKDQLLLDLTPDGLRIQIV 166
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
+ + L+ + +L ++ +N+ P+ I+I HTD+ + N +
Sbjct: 167 DKQNRPMFDIGRDQLKPYTVAILHELSNFINQVPN-HISITGHTDTTAYSSDAGYTNWEL 225
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +RA+ + L+ G+S + V G + + + T N+RI I + +
Sbjct: 226 SADRANAARRALVGGGMSDAKVTRVVGLSSS--VLFDKTDPQNPINRRISIVVMTQD 280
>gi|58580310|ref|YP_199326.1| flagellar motor protein MotB [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|188578754|ref|YP_001915683.1| flagellar motor protein MotB [Xanthomonas oryzae pv. oryzae PXO99A]
gi|58424904|gb|AAW73941.1| chemotaxis MotB protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|188523206|gb|ACD61151.1| chemotaxis MotB protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 377
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 66/177 (37%), Gaps = 15/177 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIP 77
R++ + KR + + + ++ +++ D + I
Sbjct: 107 GRKRDNAADTTEDSRSKDKKRLETLMQELKEAIDKSQALEPFKDQLLLDLTPDGLRIQIV 166
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
+ + L+ + +L ++ +N+ P+ I+I HTD+ + N +
Sbjct: 167 DKQNRPMFDIGRDQLKPYTVAILHELSNFINQVPN-HISITGHTDTTAYSSDAGYTNWEL 225
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +RA+ + L+ G+S + V G + + + T N+RI I + +
Sbjct: 226 SADRANAARRALVGGGMSDAKVTRVVGLSSS--VLFDKTDPQNPINRRISIVVMTQD 280
>gi|319403973|emb|CBI77561.1| putative flagellar motor protein MotB [Bartonella rochalimae ATCC
BAA-1498]
Length = 384
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 65/168 (38%), Gaps = 10/168 (5%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVH-- 79
+K+K + +S + ++ + + D + + + V I + + +
Sbjct: 185 KDQKQKTLVKESIQENNSSENSRALAQELTDFIEGENSNILAHVKPIKEGVMIELMDQPK 244
Query: 80 --VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---NNLLISQERA 134
+ V + + ++ +A I+ K+ + I HTD+ +N +S RA
Sbjct: 245 YEMFKVGLSVPTARTIDLISSMAGIIAKYQG-DVVISGHTDARAYRSAVYDNWQLSTARA 303
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ L++ G R + V G+A + + D N+RI I I
Sbjct: 304 QMAYYMLVRGGFDEKRILRVEGYADRDLKNKKDPYA--AENRRISIFI 349
>gi|207723077|ref|YP_002253485.1| chemotaxis motility protein b [Ralstonia solanacearum MolK2]
gi|206588269|emb|CAQ18823.1| probable chemotaxis motility protein b [Ralstonia solanacearum
MolK2]
Length = 171
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 9/129 (6%)
Query: 63 IVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I ++ G I + + + +E +L+ + + LN P+ I++ HTD+
Sbjct: 3 IDMTSEGLRIQIVDQQNRPMFANASAEVEPYMRTILRELGSALNDVPN-PISLSGHTDAT 61
Query: 121 GTLKN----NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
N +S +RA+ + LI G+ + V G P+D T N+
Sbjct: 62 QYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVPLD--KTDAFNPINR 119
Query: 177 RIEIQIFPR 185
RI I +
Sbjct: 120 RISIVVLNN 128
>gi|225350146|gb|ACN87983.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 52/166 (31%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V +++ K ++ + ++ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCSNVPGLPEYKGCPKPQEAYAVEATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|170078642|ref|YP_001735280.1| ABC transporter, periplasmic binding protein [Synechococcus sp.
PCC 7002]
gi|169886311|gb|ACB00025.1| ABC transporter, periplasmic binding protein [Synechococcus sp.
PCC 7002]
Length = 433
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 1/80 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L++ ++GC + + G +K E ++T
Sbjct: 10 LKLTSLALSSALVLTGCVGEQTTSGDDTTSDTKQVTVFGVMIGEQQEKIEAALAPFTEET 69
Query: 62 GIVVSRIG-DMITCYIPVHV 80
GI V G D +P+ V
Sbjct: 70 GIEVVYEGTDTFATTLPIRV 89
>gi|289807272|ref|ZP_06537901.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 135
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 51/135 (37%), Gaps = 10/135 (7%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+++ + + I + + G I + +E +L+ IA +LN
Sbjct: 4 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGI 63
Query: 107 PSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
P+ I++ HTD +N +S +RA+ + L+ G+ + + + V G A
Sbjct: 64 PN-RISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATM 122
Query: 162 PIDTNDTKVGRQNNQ 176
+ N+
Sbjct: 123 RLSDRGPDD--AINR 135
>gi|225350130|gb|ACN87975.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 51/166 (30%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ K ++ + ++ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLELSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|187918870|ref|YP_001887901.1| RND family efflux transporter MFP subunit [Burkholderia
phytofirmans PsJN]
gi|187717308|gb|ACD18531.1| efflux transporter, RND family, MFP subunit [Burkholderia
phytofirmans PsJN]
Length = 560
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 53/165 (32%), Gaps = 13/165 (7%)
Query: 23 REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF 82
+ D + + + + + +
Sbjct: 402 TSSNAASVAGQTDASAASGTVNGAAGASANAAAQANPKGTSANATNPSALPAGQTAVFFA 461
Query: 83 VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLI 142
+ L+ + L +A L P + I +TDS G+ + N+ ++ RA ++S LI
Sbjct: 462 LGSASLDSQSADALAGVARRLLAAPGSRAVISGYTDSSGSYEANVKLAAARAATVRSALI 521
Query: 143 QRGVSSNRFISVRGFAYKYP---IDTNDTKVGRQNNQRIEIQIFP 184
GV R + P + ++ ++R+++ + P
Sbjct: 522 VAGVDVARID------MRRPARIVASDAPD----KSRRVDVTLAP 556
>gi|39997270|ref|NP_953221.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
gi|39984160|gb|AAR35548.1| OmpA domain protein, putative [Geobacter sulfurreducens PCA]
Length = 199
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 32/202 (15%)
Query: 2 IKELGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSS-------------- 46
+K L +++ + ++ R++ + + ++ S
Sbjct: 1 MKSLSITVLALILPLTAHAAEIRQRPFSYSLDAVAAKQDDQFVVCSDCPDHRLSLLPVKP 60
Query: 47 ------LDKAEDEFQMQLQDTGIVVSRIGD-MITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
D + E Q+ L+ + S G + L + +
Sbjct: 61 MLAMRLSDPVKPEPQLALETKPVQSSTHGAIETEIQLTSVQFDFDSEQLSRHERLRFDGL 120
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
L K + ++ +T +IGT N +S RA+ + + G ++V G
Sbjct: 121 LAGLTK--QGMFGLKGYTCTIGTDDYNERLSIRRANHVAGIMKSNGF---NVVTVEGKGK 175
Query: 160 KYPIDTNDTKVGRQNNQRIEIQ 181
P+ T+ ++ N+R+EI
Sbjct: 176 CCPVSTD-----KRLNRRVEIV 192
>gi|225350128|gb|ACN87974.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 51/166 (30%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ K ++ + ++ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 KGVFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|50235075|gb|AAT70740.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/181 (12%), Positives = 53/181 (29%), Gaps = 17/181 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSS-----------LDKAED----EFQMQLQDT 61
GC + V ++ + LDK + +
Sbjct: 180 GCPWPDTDNDGVLDKDDACPEVAGPVENNGSPWPDSDNDGVLDKDDKCPSVPGLPEYNGC 239
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
S T + ++ + + L A ++ + HTD G
Sbjct: 240 PKPQSEYAKDATGALQGIFFHFNKSSIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKG 299
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEI 180
NL +S+ERA + + ++ S + +G + + R ++++ +
Sbjct: 300 NANYNLKLSRERAASVVA-ALEARGVSPSQLKSKGVGSAEATVPASASNEERMKDRKVVV 358
Query: 181 Q 181
+
Sbjct: 359 E 359
>gi|21244419|ref|NP_644001.1| flagellar motor protein MotB [Xanthomonas axonopodis pv. citri str.
306]
gi|21110081|gb|AAM38537.1| chemotaxis MotB protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 380
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 67/177 (37%), Gaps = 15/177 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIP 77
R++ + KR + + ++ +++ D + I
Sbjct: 107 GRKRDNAADTDVDSRAKDKKRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIV 166
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
+ + L+ + +L+ +++ +N+ P+ I+I HTD+ + N +
Sbjct: 167 DKQNRPMFDIGRDQLKPYTVAILRELSSFINQVPN-HISITGHTDTTAYSSDAGYTNWEL 225
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +RA+ + L+ G+S + V G + + + T N+RI I + +
Sbjct: 226 SADRANAARRALVAGGMSDAKVTRVVGLSSS--VLFDKTDPQNPINRRISIVVMTQD 280
>gi|294624638|ref|ZP_06703310.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292601073|gb|EFF45138.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 383
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 67/177 (37%), Gaps = 15/177 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIP 77
R++ + KR + + ++ +++ D + I
Sbjct: 107 GRKRDNAADTDVDSRAKDKKRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIV 166
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
+ + L+ + +L+ +++ +N+ P+ I+I HTD+ + N +
Sbjct: 167 DKQNRPMFDIGRDQLKPYTVAILRELSSFINQVPN-HISITGHTDTTAYSSDAGYTNWEL 225
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +RA+ + L+ G+S + V G + + + T N+RI I + +
Sbjct: 226 SADRANAARRALVAGGMSDAKVTRVVGLSSS--VLFDKTDPQNPINRRISIVVMTQD 280
>gi|30248076|ref|NP_840146.1| flagellar motor protein MotB [Nitrosomonas europaea ATCC 19718]
gi|30179961|emb|CAD83956.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718]
Length = 307
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 64/182 (35%), Gaps = 20/182 (10%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI----------VVSRIGD 70
+ + K + + ++ L+K + + + ++ G
Sbjct: 101 SDFDDLKRSIDMDALQALQDRFELEQLEKLKARIEDTINSNPALNKFKSQLLLDITSEGL 160
Query: 71 MITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK---- 124
I + + + L+ +L I +LN + I++ HTD+
Sbjct: 161 RIQIVDEKNRPMFSMGRAELQSYTKMILHEIGKMLNDVGN-KISLSGHTDATPYPTGEKS 219
Query: 125 -NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+N +S +RA+ + LI G+S + + V G + D D N+RI I +
Sbjct: 220 YSNWELSADRANASRRELIAGGMSPEKMLRVVGLSSAVMFDKADPFS--PFNRRISIIVM 277
Query: 184 PR 185
+
Sbjct: 278 NK 279
>gi|296101384|ref|YP_003611530.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295055843|gb|ADF60581.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 313
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 62/178 (34%), Gaps = 19/178 (10%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI--------VVSRIGDMITCY 75
E + + + N N +AE + T I I +
Sbjct: 133 ESAQTYFIQVNPGTSGNTAALEERSRAEALLSKMHKQTKIINRASQVKTCDYINNSGVVL 192
Query: 76 IPVHVSFVSEVF----LEKKFLPMLQLIATILNK-FPSTVIAIQSHTDSIGTLKNNLLIS 130
I V F + + L + K + I I +TD+IG+ + N +S
Sbjct: 193 IQEQVLFRFAASNAAGIFAESRNKLDEVVKFTKKANNVSEIQIVGYTDAIGSREANQRLS 252
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN------NQRIEIQI 182
+ RAD ++S LI++G+ + G + T +Q ++R+EI +
Sbjct: 253 EARADTVRSLLIEKGIKPELINNTTGKGIAQSAEGCGTSASQQAAGCNVNSRRVEILV 310
>gi|254411859|ref|ZP_05025635.1| Putative phospholipid-binding domain family [Microcoleus
chthonoplastes PCC 7420]
gi|196181581|gb|EDX76569.1| Putative phospholipid-binding domain family [Microcoleus
chthonoplastes PCC 7420]
Length = 905
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 45/140 (32%), Gaps = 4/140 (2%)
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
K + + + + + ++ L+ + + L
Sbjct: 770 DAQKITEALEEIPGVDSVTNTVQLQPLAL-ASRIYFDLNSADLKASEQAKMDALTAFLAD 828
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+P+ + + H+D GT N ++ ERA + L+++ R + V P
Sbjct: 829 YPNQSLRVIGHSDPSGTPLENQELALERAKAVAEVLVRQ-GIDARRLEVS--GTTKPPTG 885
Query: 166 NDTKVGRQNNQRIEIQIFPR 185
Q ++ +E + R
Sbjct: 886 VYADEPHQYSRFVEFEAIAR 905
>gi|146278768|ref|YP_001168927.1| flagellar motor protein-like protein [Rhodobacter sphaeroides ATCC
17025]
gi|145557009|gb|ABP71622.1| Flagellar motor protein-like protein [Rhodobacter sphaeroides ATCC
17025]
Length = 278
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 57/181 (31%), Gaps = 21/181 (11%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG----IVVSRIGDMITCY 75
K + ++ + R + + IV + +
Sbjct: 104 ATPENKARGERGETGEAAEEQARLEEVEKLLKARTGESMTMERLLRHIVTRITDEGLVIE 163
Query: 76 I---PVHVSFVSEVFLEKKFLPMLQLIATILNK---FPSTVIAIQSHTDSIGT---LKNN 126
I P F+ + + + P+L IA +L + + IA+ H S
Sbjct: 164 IFDLPDVPLFLGDTD-QPE--PILPQIARLLAEVLPITTNRIAVSGHVRSYPITLIRNPA 220
Query: 127 LLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ-NNQRIEIQIFPR 185
+S RA ++ + G+ R + GFA + P T N R+E+ + +
Sbjct: 221 WDLSALRAQRMRELIESAGLPGERTQRISGFADRKP----ATPDPMAVRNNRLEVILLRK 276
Query: 186 G 186
Sbjct: 277 D 277
>gi|126046419|gb|ABN73094.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 51/166 (30%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ K ++ + ++ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVRGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|304312855|ref|YP_003812453.1| Outer membrane protein [gamma proteobacterium HdN1]
gi|301798588|emb|CBL46818.1| Outer membrane protein [gamma proteobacterium HdN1]
Length = 285
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 91 KFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
K L LIA I + H+D++G L +N +S+ RA+ ++ YLI +
Sbjct: 191 KAQARLDLIAGYQKLDAGIRKIFVDGHSDTMGRLGHNWEVSRLRANAVREYLIAK-GVPE 249
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
I +R + PID + N+R+ +Q+
Sbjct: 250 EMIVMRYWGKSRPIDKRGNRKSSPANRRVVVQMV 283
>gi|149374319|ref|ZP_01892093.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
gi|149361022|gb|EDM49472.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
Length = 310
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 9/116 (7%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHTDSIGTLKNNLLISQE 132
L L I + + + + HTDS G+ +N +S+E
Sbjct: 185 IKRSRISFASGSTSLSDADRRFLDNIVMYIQADSTVERVFVDGHTDSSGSRIDNRALSEE 244
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR-QNNQRIEIQIFPRGN 187
RA+ + YLI + ++ R A +YP+ R +N+R I++ G
Sbjct: 245 RANAVADYLIGQ-GIEADLVTTRAHADQYPV------SRRPADNRRTTIRLQREGE 293
>gi|29349260|ref|NP_812763.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
VPI-5482]
gi|253570394|ref|ZP_04847803.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
gi|298384800|ref|ZP_06994359.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
gi|29341168|gb|AAO78957.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
VPI-5482]
gi|251840775|gb|EES68857.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
gi|298261944|gb|EFI04809.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
Length = 394
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQE 132
+ L + L +A+ + +FP+ I + DS GT N +S E
Sbjct: 289 IAPRTVFFKIGSDKLSPQEEMNLSYLASKMKEFPNMTYTINGYADSATGTPSINQKLSLE 348
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFA 158
RA +K L+++ S +SV
Sbjct: 349 RAQAVKDLLVKKYGISADRLSVAAGG 374
>gi|331681649|ref|ZP_08382282.1| MbhA protein [Escherichia coli H299]
gi|331080851|gb|EGI52016.1| MbhA protein [Escherichia coli H299]
Length = 261
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 96 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAKIMPFFKTLLVELAPVFDSL-DNK 149
Query: 111 IAIQSHTDSIGTLKN---NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I HTD++ N N +S +RA + L + G+ ++ + V A + +D +
Sbjct: 150 IIFTGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 209
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 210 PQS--AGNRRIEIMVLTK 225
>gi|332829521|gb|EGK02170.1| hypothetical protein HMPREF9455_01804 [Dysgonomonas gadei ATCC
BAA-286]
Length = 382
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 57/166 (34%), Gaps = 9/166 (5%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI---VVSRIGDMITCYI 76
A + + ++ ND + S + + + E + + I
Sbjct: 218 AADPAELQRLNNQINDQRALLGNKDSEISRLKTELANKPEPQVIVQETKEIKEQTEVLMN 277
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD-SIGTLKNNLLISQERAD 135
V V + LE+ + A L PS + + + D S GT N +S++RA+
Sbjct: 278 AVVVFRIGSAKLEQNQDINIFNAARYLKDNPSVNVVVTGYADKSTGTAAINQRLSEQRAE 337
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ LI + + I+ + K + D Q N+ +
Sbjct: 338 AVAKVLIDKYDIAPSRITTKASGDKEQLFPTD-----QWNRVVVFT 378
>gi|315023542|gb|EFT36546.1| OmpA [Riemerella anatipestifer RA-YM]
Length = 488
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 51/166 (30%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ K ++ + ++ +
Sbjct: 310 GCPWPDTDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGA--------------L 355
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 356 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 415
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 416 VVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 460
>gi|225350154|gb|ACN87987.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 51/166 (30%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ K ++ + ++ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|225350140|gb|ACN87980.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 51/166 (30%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ K ++ + ++ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|225350134|gb|ACN87977.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 51/166 (30%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ K ++ + ++ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|156106757|gb|ABU49601.1| outer membrane protein [Riemerella anatipestifer]
Length = 387
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 51/166 (30%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ K ++ + ++ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|126046387|gb|ABN73088.1| OmpA [Riemerella anatipestifer]
gi|126046398|gb|ABN73090.1| OmpA [Riemerella anatipestifer]
gi|126046413|gb|ABN73093.1| OmpA [Riemerella anatipestifer]
gi|225350132|gb|ACN87976.1| OmpA [Riemerella anatipestifer]
gi|225350136|gb|ACN87978.1| OmpA [Riemerella anatipestifer]
gi|225350138|gb|ACN87979.1| OmpA [Riemerella anatipestifer]
gi|225350142|gb|ACN87981.1| OmpA [Riemerella anatipestifer]
gi|225350144|gb|ACN87982.1| OmpA [Riemerella anatipestifer]
gi|225350148|gb|ACN87984.1| OmpA [Riemerella anatipestifer]
gi|225350150|gb|ACN87985.1| OmpA [Riemerella anatipestifer]
gi|225350152|gb|ACN87986.1| OmpA [Riemerella anatipestifer]
gi|225350156|gb|ACN87988.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 51/166 (30%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ K ++ + ++ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|119382554|gb|ABL73889.1| outer membrane protein A [synthetic construct]
Length = 395
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 51/166 (30%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ K ++ + ++ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|106647238|gb|ABF82272.1| outer membrane protein A precursor [Riemerella anatipestifer]
gi|318068275|gb|ADV36925.1| outer membrane protein A [Riemerella anatipestifer]
gi|318068277|gb|ADV36926.1| outer membrane protein A [Riemerella anatipestifer]
Length = 387
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 51/166 (30%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ K ++ + ++ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 315 VVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|240128256|ref|ZP_04740917.1| Yag [Neisseria gonorrhoeae SK-93-1035]
Length = 171
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 18/172 (10%), Positives = 53/172 (30%), Gaps = 12/172 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHK--SNDTDIVNKRFGSSLDKAEDEFQMQL 58
MIK L + ++ C +E + + + + + + ++ + L
Sbjct: 1 MIKNT-LFVASAMILTACAAPKQEVAGLPQDATYTVEQNQLGEFVFCRNEECSGFERKVL 59
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + ++ I + L + + L+ + L + + ++ D
Sbjct: 60 AEQPVYAQTQTNLQKDEIR-VFFNLGSSHLGAEGVRTLKRVLPKLK--NTQTVYLRGWAD 116
Query: 119 SIGTLKNNLLIS-QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
SIG + ++ + +++ S + + P N
Sbjct: 117 SIGGRNTAINRRLAKQRAAVIGKWLRKHNVSAKIRTASS-----PACCNSDD 163
>gi|21233083|ref|NP_639000.1| flagellar motor protein MotB [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66770023|ref|YP_244785.1| flagellar motor protein MotB [Xanthomonas campestris pv. campestris
str. 8004]
gi|21114936|gb|AAM42924.1| chemotaxis MotB protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66575355|gb|AAY50765.1| chemotaxis MotB protein [Xanthomonas campestris pv. campestris str.
8004]
Length = 393
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 68/180 (37%), Gaps = 15/180 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIP 77
R++ + KR + + ++ +++ D + I
Sbjct: 107 GRKRDNAADTDVDSRAKDKKRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIV 166
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
+ + L+ + +L+ +++ +N+ P+ I+I HTD+ + N +
Sbjct: 167 DKQNRPMFDIGRDQLKPYTVDILRELSSFINQVPN-HISITGHTDTTAYSSDAGYTNWEL 225
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
S +RA+ + L+ G++ + V G + + + T N+RI I + + +
Sbjct: 226 SADRANAARRALVGGGMADAKVTRVVGLSSS--VLFDKTNPQNPINRRISIVVMTQDAEQ 283
>gi|188993235|ref|YP_001905245.1| flagellar motor protein MotB [Xanthomonas campestris pv. campestris
str. B100]
gi|167734995|emb|CAP53207.1| motB2 [Xanthomonas campestris pv. campestris]
Length = 392
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 68/180 (37%), Gaps = 15/180 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIP 77
R++ + KR + + ++ +++ D + I
Sbjct: 107 GRKRDNAADTDVDSRAKDKKRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIV 166
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
+ + L+ + +L+ +++ +N+ P+ I+I HTD+ + N +
Sbjct: 167 DKQNRPMFDIGRDQLKPYTVDILRELSSFINQVPN-HISITGHTDTTAYSSDAGYTNWEL 225
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
S +RA+ + L+ G++ + V G + + + T N+RI I + + +
Sbjct: 226 SADRANAARRALVGGGMADAKVTRVVGLSSS--VLFDKTNPQNPINRRISIVVMTQDAEQ 283
>gi|32490782|ref|NP_871036.1| flagellar motor protein MotB [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25165988|dbj|BAC24179.1| motB [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 326
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 62/156 (39%), Gaps = 13/156 (8%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITC--YIPVHVSFVSEVFLEKKFLPMLQLIATI 102
+ + + + I + G I + + +++++A +
Sbjct: 121 QQMLRNNPRLRDFQSNMKITLVHEGLRIEIIDSKKRPMFTTGGKEIAPYMRYIMRILAPV 180
Query: 103 LNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
LN+ P+ I++ HTD+ + +N +S +RA+ + LI+ G+ +++ + V G
Sbjct: 181 LNELPN-RISLAGHTDNQPYINGERGYSNWELSADRANASRRELIEGGLMNDKILRVIGM 239
Query: 158 AYKYPIDTNDTKVGRQNNQRIEIQIFPRGN---IKK 190
A + + +RI I I + IKK
Sbjct: 240 ANTM--SDVNKHHHHASQRRISIIILTKQQEEAIKK 273
>gi|330950601|gb|EGH50861.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae Cit 7]
Length = 129
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ S + I L+ + + L + A L + ++ +TD
Sbjct: 46 NSGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRSLDVHAKDLKAN-GARVVLEGNTD 104
Query: 119 SIGTLKNNLLISQERADVIKSYLI 142
GT + N+ + + RA ++ YL+
Sbjct: 105 ERGTREYNMALGERRAKAVQRYLV 128
>gi|312114255|ref|YP_004011851.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
gi|311219384|gb|ADP70752.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
Length = 213
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 52/183 (28%), Gaps = 12/183 (6%)
Query: 6 GLSMFIMTTI---SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ + + + A + N L ++ + G
Sbjct: 17 AIMLIVGALVCFRVATAFAQYPETIDAETIVKALQPKNAPPTRPLVRSYTPLNRGIAIEG 76
Query: 63 IVV-SRIGDMITCYIPVHVSFVSEVFLE-KKFLPMLQLIATILNK--FPSTVIAIQSHTD 118
+ I + + L + + LN + I HTD
Sbjct: 77 PEIGEEQAPNIDLVVN---FEYDQSALTMSDAQITVDTLGRALNDPRLARSRFMIIGHTD 133
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+ G NL +SQ RA+ + + L + + G + D G N+R+
Sbjct: 134 ARGGDGYNLGLSQRRANAVAARLRDFHAVAANRLVAEGRGMRELKDPVRPLGG--INRRV 191
Query: 179 EIQ 181
+I+
Sbjct: 192 QIK 194
>gi|114762915|ref|ZP_01442347.1| Outer membrane protein, OmpA/MotB family [Pelagibaca bermudensis
HTCC2601]
gi|114544525|gb|EAU47532.1| Outer membrane protein, OmpA/MotB family [Roseovarius sp. HTCC2601]
Length = 674
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILN----KFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + L + + P V I+ HTD+ G NL +
Sbjct: 556 ISVDSINFETGSAAIRPQEAQALAALGNAMKRVISDNPGEVFLIEGHTDATGGWGYNLAL 615
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKV 170
S RA+ + L + + ++G+ T
Sbjct: 616 SDRRAESVALALTEYFDVPPENMVLQGYGESDLAIETQTSE 656
>gi|268686650|ref|ZP_06153512.1| predicted protein [Neisseria gonorrhoeae SK-93-1035]
gi|268626934|gb|EEZ59334.1| predicted protein [Neisseria gonorrhoeae SK-93-1035]
Length = 173
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 18/172 (10%), Positives = 53/172 (30%), Gaps = 12/172 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHK--SNDTDIVNKRFGSSLDKAEDEFQMQL 58
MIK L + ++ C +E + + + + + + ++ + L
Sbjct: 3 MIKNT-LFVASAMILTACAAPKQEVAGLPQDATYTVEQNQLGEFVFCRNEECSGFERKVL 61
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + ++ I + L + + L+ + L + + ++ D
Sbjct: 62 AEQPVYAQTQTNLQKDEIR-VFFNLGSSHLGAEGVRTLKRVLPKLK--NTQTVYLRGWAD 118
Query: 119 SIGTLKNNLLIS-QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
SIG + ++ + +++ S + + P N
Sbjct: 119 SIGGRNTAINRRLAKQRAAVIGKWLRKHNVSAKIRTASS-----PACCNSDD 165
>gi|325915929|ref|ZP_08178225.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
gi|325537896|gb|EGD09596.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
Length = 396
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 67/180 (37%), Gaps = 15/180 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIP 77
R++ + +R + + ++ +++ D + I
Sbjct: 107 GRKRDNAADTDVDSRAKDKRRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIV 166
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
+ + L+ + +L+ +++ +N+ P+ I+I HTD+ + N +
Sbjct: 167 DKQNRPMFDIGRDQLKPYTVDILRELSSFINQVPN-HISITGHTDTTAYSSDAGYTNWEL 225
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
S +RA+ + L+ G+ + V G + + + T N+RI I + + +
Sbjct: 226 SADRANAARRALVGGGMEDAKVTRVVGLSSS--VLFDKTNPQNPINRRISIVVMTQDAEQ 283
>gi|255690559|ref|ZP_05414234.1| major outer membrane protein OmpA [Bacteroides finegoldii DSM
17565]
gi|260624020|gb|EEX46891.1| major outer membrane protein OmpA [Bacteroides finegoldii DSM
17565]
Length = 395
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 5/102 (4%)
Query: 62 GIVVSRIGDMIT----CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + +++ + L + L +A + + P+T I +
Sbjct: 274 PVEIEDTEEVVIADTNIAPRTVFFKIGSDKLSPQEEMNLSYLANKIKESPNTTYTINGYA 333
Query: 118 DS-IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
DS GT N +S ERA V+K L+++ S + V
Sbjct: 334 DSATGTPAFNQKLSLERAQVVKDLLVKKYGISADRLKVAAGG 375
>gi|227873122|ref|ZP_03991414.1| ABC superfamily ATP binding cassette transporter, binding protein
[Oribacterium sinus F0268]
gi|227841016|gb|EEJ51354.1| ABC superfamily ATP binding cassette transporter, binding protein
[Oribacterium sinus F0268]
Length = 376
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 39/108 (36%), Gaps = 5/108 (4%)
Query: 1 MIKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K + L++ + +++ CG + EKK+ ++ + ++++ E +
Sbjct: 1 MKKRIFAAFLALTMAFSLAACGASGGEKKESAKATEQGSEKGTEAGSEKAEESKAEKKDA 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
G+ V + D + S ++ L + A L
Sbjct: 61 SSGKGLKVGIVTD--VGGVNDGSFNQSAWEGLQRAQKELGIEAKYLES 106
>gi|182412224|ref|YP_001817290.1| OmpA/MotB domain-containing protein [Opitutus terrae PB90-1]
gi|177839438|gb|ACB73690.1| OmpA/MotB domain protein [Opitutus terrae PB90-1]
Length = 266
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 49/138 (35%), Gaps = 11/138 (7%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ D I + D + + V + + ++Q ++ +++
Sbjct: 106 RLDQDITDKPIEIQVTADGLRLTVFDRARKPVFVGNTAEFTEWGRFVMQNLSWTVDRHK- 164
Query: 109 TVIAIQSHTDSI----GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ I HT + +S +RA+ + L+ V V G+A P++
Sbjct: 165 FRVTIDGHTKAQLDLGPGEYTPWELSADRANAARRALVHYAVDPALIDRVTGYADTRPVE 224
Query: 165 TNDTKVGRQNNQRIEIQI 182
+ ++NQRI + +
Sbjct: 225 GESPEA--ESNQRITLSL 240
>gi|161505468|ref|YP_001572580.1| hypothetical protein SARI_03626 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160866815|gb|ABX23438.1| hypothetical protein SARI_03626 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 275
Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 50/123 (40%), Gaps = 11/123 (8%)
Query: 78 VHVSFVSEVFLE---KKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQER 133
+ ++E L K L I + + + I++ + D GT ++N+ +S R
Sbjct: 154 DILFRLNEYQLNMSDKNSQNNLDKIISFIRERGKYSSISVYGYADRQGTHQHNMKLSALR 213
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYP------IDTNDTKVGRQNNQRIEIQIFPRGN 187
A+ +K YL+ +G ++ +G P + ++++ + + P N
Sbjct: 214 AEYVKKYLVSKGFPEDKIF-AKGMGEAVPETSCPGLINESLTECLHPDRKVTVIVTPVIN 272
Query: 188 IKK 190
+K
Sbjct: 273 NRK 275
>gi|328470528|gb|EGF41439.1| hypothetical protein VP10329_07007 [Vibrio parahaemolyticus 10329]
Length = 187
Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 12/190 (6%)
Query: 1 MIKELGLSMFIM--TTISGCGLASREKKKVFLHKSNDTDIV------NKRFGSSLDKAED 52
M K + ++ ++ C S + KS+DT I L +D
Sbjct: 1 MKKLIPFAIIFTSNVALANCINHSENYVSSKVLKSSDTKITQVDGKLASVINEDLSIVQD 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
E +++ T S D + + V +E +L + ++N+ I
Sbjct: 61 EKIEKVEATNATESCTFDKNSMSL-VLHYDTNEHYLTNVHKQAISKYLELVNE--DKRIL 117
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
++ HTD +G+ N +S RA YL + NR + + F PI +
Sbjct: 118 VEGHTDDVGSQAYNKSLSLRRASTASKYLKKDLELGNRIVE-KAFGESAPICKVNENKLS 176
Query: 173 QNNQRIEIQI 182
N+R+ + I
Sbjct: 177 GCNRRVVLTI 186
>gi|294667303|ref|ZP_06732523.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292602975|gb|EFF46406.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 387
Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 66/177 (37%), Gaps = 15/177 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIP 77
R++ + KR + + + +++ D + I
Sbjct: 107 GRKRDNAADTDVDSRAKDKKRLEALMQDLREAIDKSQALEPFKDQLLLDLTPDGLRIQIV 166
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
+ + L+ + +L+ +++ +N+ P+ I+I HTD+ + N +
Sbjct: 167 DKQNRPMFDIGRDQLKPYTVAILRELSSFINQVPN-HISITGHTDTTAYSSDAGYTNWEL 225
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +RA+ + L+ G+S + V G + + + T N+RI I + +
Sbjct: 226 SADRANAARRALVAGGMSDAKVTRVVGLSSS--VLFDKTDPQNPINRRISIVVMTQD 280
>gi|224371662|ref|YP_002605826.1| hypothetical outer membrane protein [Desulfobacterium autotrophicum
HRM2]
gi|223694379|gb|ACN17662.1| hypothetical outer membrane protein [Desulfobacterium autotrophicum
HRM2]
Length = 1306
Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIA-IQSHTDSIGTLKNNLLISQERADVIKS 139
+++ L + L L+A I++ I + S G +NN+ +S RA +K
Sbjct: 1043 FDINQSDLTEDHKMALDLLAKIMDNDLDIRILAFEGRASSTGDDENNITLSHNRAKTVKD 1102
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
YL +GVS R V G+ + + R ++ + I
Sbjct: 1103 YLSVKGVSDERLGLVNGYGSALSLSNTPNQENR-IDRSVVI 1142
>gi|167946711|ref|ZP_02533785.1| hypothetical protein Epers_09238 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 36
Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 5/35 (14%), Positives = 13/35 (37%)
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+ V + + P + + N+R+E+
Sbjct: 1 MDTNQLIVISYGEERPASFANNEEAWALNRRVELV 35
>gi|109390002|gb|ABG29730.1| OmpA [Riemerella anatipestifer]
Length = 255
Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 51/166 (30%), Gaps = 16/166 (9%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ K ++ + ++ +
Sbjct: 96 GCPWPDTDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGA--------------L 141
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 142 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 201
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 202 VVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 246
>gi|78049371|ref|YP_365546.1| flagellar motor protein MotB [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325926421|ref|ZP_08187746.1| flagellar motor protein [Xanthomonas perforans 91-118]
gi|78037801|emb|CAJ25546.1| flagellar motor protein MotB [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325543210|gb|EGD14648.1| flagellar motor protein [Xanthomonas perforans 91-118]
Length = 385
Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 67/177 (37%), Gaps = 15/177 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIP 77
R++ + +R + + ++ +++ D + I
Sbjct: 107 GRKRDNAADTDVDSRAKDKRRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIV 166
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
+ + L+ + +L+ +++ +N+ P+ I+I HTD+ + N +
Sbjct: 167 DKQNRPMFDIGRDQLKPYTVAILRELSSFINQVPN-HISITGHTDTTAYSSDAGYTNWEL 225
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +RA+ + L+ G+S + V G + + + T N+RI I + +
Sbjct: 226 SADRANAARRALVAGGMSDAKVTRVVGLSSS--VLFDKTDPQNPINRRISIVVMTQD 280
>gi|75764996|ref|ZP_00744318.1| hypothetical protein RBTH_01311 [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74487517|gb|EAO51411.1| hypothetical protein RBTH_01311 [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 175
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 40/109 (36%), Gaps = 3/109 (2%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDI-VNKRFGSSLDKAEDEFQMQ 57
M K + L + M +S C + + K++ + D I V + SS K E+ + +
Sbjct: 1 MKKYILYPLMLLTMLFLSACSNSVQPKEENDVQSIKDVAIKVPENIFSSSKKNENISEDE 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ + I S S+ + + LQ + + +
Sbjct: 61 MKQNIKSYLNYSGELDENIVPLSSTTSDENITESDREKLQKLIELAKQN 109
>gi|269960866|ref|ZP_06175237.1| hypothetical protein VME_16210 [Vibrio harveyi 1DA3]
gi|269834530|gb|EEZ88618.1| hypothetical protein VME_16210 [Vibrio harveyi 1DA3]
Length = 441
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 54/178 (30%), Gaps = 23/178 (12%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI-----VNKRFGSSLDKAEDEFQM 56
+K L L+ + T+ GCG + KK + DT I + ++
Sbjct: 1 MKRLFLASLVSATLIGCGGSDGGDKKPTTPEQPDTSIPTTPLEPSTPVEPEEDKDEPLTP 60
Query: 57 QLQDTGIVVSRIGDMITCYIPVH-VSFVSEVFLEKKFLPMLQLIAT-------ILNKFPS 108
T + G+ +T +P ++ + L + + L+++ L +
Sbjct: 61 LEPSTPVDPEEDGEDMTDVVPSTPITIETIAELLDEPVDKLEMLFAEGENFKFYLKDENN 120
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG----FAYKYP 162
VI + YL + + F+ G Y+ P
Sbjct: 121 VVI------HFAPWNNTTWVAFDVMNSTATHYLCFQLEDTQEFVEDSGHLTRMGYEEP 172
>gi|119382556|gb|ABL73890.1| outer membrane protein A [synthetic construct]
Length = 388
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 14/107 (13%), Positives = 39/107 (36%), Gaps = 2/107 (1%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ ++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 254 LKGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAA 313
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQ 181
+ + ++ + + +G + + R ++++ ++
Sbjct: 314 SVVA-ALEARGVNPSQLKSKGVGSAEATVPASASNEERMKDRKVVVE 359
>gi|218895914|ref|YP_002444325.1| lipoprotein [Bacillus cereus G9842]
gi|218542463|gb|ACK94857.1| lipoprotein [Bacillus cereus G9842]
Length = 198
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 40/109 (36%), Gaps = 3/109 (2%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDI-VNKRFGSSLDKAEDEFQMQ 57
M K + L + M +S C + + K++ + D I V + SS K E+ + +
Sbjct: 1 MKKYILYPLMLLTMLFLSACSNSVQPKEENDVQSIKDVAIKVPENIFSSSKKNENISEDE 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ + I S S+ + + LQ + + +
Sbjct: 61 MKQNIKSYLNYSGELDENIVPLSSTTSDENITESDREKLQKLIELAKQN 109
>gi|305665601|ref|YP_003861888.1| phosphate ABC transporter periplasmic phosphate-binding protein
[Maribacter sp. HTCC2170]
gi|88710357|gb|EAR02589.1| phosphate ABC transporter, periplasmic phosphate-binding protein
[Maribacter sp. HTCC2170]
Length = 319
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/158 (12%), Positives = 36/158 (22%), Gaps = 6/158 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQD 60
+K + + + I CG +K ++ K GSS + + +
Sbjct: 1 MKRILVIASLALAIVACGDKKEKKGGDASQETTSLSGTIKVDGSSTVFPITEAVAEEFRG 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS- 119
V + E L P+ + + ++ D
Sbjct: 61 VQPKVKVTVGVSGTGGGFKKFSRGETNLSNASRPIKDKEKAACKENNIKYLELEVAYDGL 120
Query: 120 ----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+ E I Q V I
Sbjct: 121 AVIVHPENNWVDHFTVEELKKIWEPAAQGKVMKWNQIR 158
>gi|89094116|ref|ZP_01167059.1| probable signal peptide protein [Oceanospirillum sp. MED92]
gi|89081591|gb|EAR60820.1| probable signal peptide protein [Oceanospirillum sp. MED92]
Length = 198
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 23/199 (11%), Positives = 59/199 (29%), Gaps = 23/199 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSND-----TDIVNK-------RFGSSLDK 49
+K+L ++ ++ + A + + T+ + ++++
Sbjct: 1 MKKLAIASGLVLAMGMATGAQAHPENNGYWDESPHQTVWTNSAGECWRHGFWNDSNTVEG 60
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ + + + + + L +
Sbjct: 61 CDGYKAPAAPEAPAPAPKPMAKSVVEKHIVYFDFDSS--NPGDVSDIADYIKSLKEVN-- 116
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ + H D IG N +SQ+R + + +Q S IS P + D +
Sbjct: 117 SVNLVGHADRIGASAYNDALSQKRVNAVSD-ALQGAGVSGSAISTGYMGENAPAKSCDGQ 175
Query: 170 ------VGRQNNQRIEIQI 182
+ N+R+E++I
Sbjct: 176 RGTNLIDCLRANRRVEVEI 194
>gi|241667092|ref|YP_002985176.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240862549|gb|ACS60214.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 652
Score = 43.5 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 8/125 (6%)
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
GI + ++ IPV ++F ++ + + L + I + HTD
Sbjct: 526 GGIYSENVRGIVPVSIPVPITFDFNKSSFTSIGTEAAEELLEALKEQKPGRIILIGHTDR 585
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID----TNDTKVG-RQN 174
G N +S+ RA + +L G+ + I G P+D N T+
Sbjct: 586 RGGDDYNQKLSERRAQAVADFLKSNGLDAT--IDAEGRGASEPVDVTATANLTEDDVDAL 643
Query: 175 NQRIE 179
N+R+E
Sbjct: 644 NRRVE 648
>gi|327404085|ref|YP_004344923.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327319593|gb|AEA44085.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 725
Score = 43.5 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ + L + +L P V+ + SHTD G N ++S+ RA YL++
Sbjct: 562 DSTINS--KDSLIYVYDLLIANPGLVLELSSHTDPRGNDVYNQVLSENRAKACYKYLVEE 619
Query: 145 GVSSNRFISVRGFAYKYP 162
R I G + P
Sbjct: 620 KGVDPRRIIPVGKGEREP 637
>gi|121998194|ref|YP_001002981.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1]
gi|121589599|gb|ABM62179.1| OmpA/MotB domain protein [Halorhodospira halophila SL1]
Length = 321
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 9/108 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ-SHTDSIGTLKNNLLISQERADV 136
L + L ++ + P + + + D+ G+ + N +++ RA
Sbjct: 216 EVYFATGSDDLTRNALDEIRRFVRAVEDNPHWGVILSIGYADTRGSAEVNEQLAEARASA 275
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG---RQNNQRIEIQ 181
++ L+ G+ +R I V ID D + N+R+E++
Sbjct: 276 VRDELVHLGLPEDR-IEV----EARLIDDEDAEQDIHELAGNRRVELR 318
>gi|237731623|ref|ZP_04562104.1| outer membrane protein A [Citrobacter sp. 30_2]
gi|226907162|gb|EEH93080.1| outer membrane protein A [Citrobacter sp. 30_2]
Length = 348
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 14/119 (11%), Positives = 37/119 (31%), Gaps = 11/119 (9%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATI--LNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ L + + + L + ++D G N +S +RA
Sbjct: 230 SDVMFGYDSAALTPEGKAAIAQLYRNPGLQPAKDKATVVIGYSDRTGAADYNQQLSAQRA 289
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGR------QNNQRIEIQIFPR 185
+ L+ I+ +G + + D + G+ ++ + ++I +
Sbjct: 290 QAVADELVAL-GMPAANITAQGHGSSDSVTGSSCDGQTGQQLINCLAPDRHVVVEITDK 347
>gi|149177419|ref|ZP_01856023.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148843752|gb|EDL58111.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 375
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 42/107 (39%), Gaps = 4/107 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ + L + ISGC + + V + T+ +++ ++E + L+
Sbjct: 4 FRGMSLFALSLLLISGCADKPTQNEPVANQ-AKKTEQSTDTPKATVPESEVKLAESLKTL 62
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEK-KFLPMLQLIATILNKFP 107
G + + + + + + L++ L L+ + +LN+ P
Sbjct: 63 GAKLKQDQAGYVIEVDFRGTKIDDAALKEIAGLSHLRSL--LLNETP 107
>gi|332669857|ref|YP_004452865.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332338895|gb|AEE45478.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484]
Length = 183
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 13/166 (7%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
R+ V + + + + S+D ++ G T + V
Sbjct: 22 DRDDAPVPTPDAIERSVDSYATDGSVD---AYTTQGSVESVAPPETDGGTTTLTVGSDVL 78
Query: 82 F-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
F + L+ L + + +A+ HTDS G NL +S RA+ + +
Sbjct: 79 FAYASHDLDPAAAAALAALVEQVPA--GAQVAVVGHTDSRGGDAVNLPLSSARAEAVAAV 136
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQ 181
L ++V G P+ N+R+E++
Sbjct: 137 LRSTRPDL--VLAVGGAGSTEPVADEYVAGAPDLAAMARNRRVELR 180
>gi|312438107|gb|ADQ77178.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus TCH60]
Length = 219
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ L + +SGC + E K + + AE + +
Sbjct: 1 MLKKAKLILIATLLLSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFSLKVKA 83
>gi|125491378|gb|ABN43176.1| putative outer membrane protein A [Bordetella petrii]
Length = 137
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + + + + L+ + +L +A + I HT
Sbjct: 41 VAQAPAKPTPMATKVVFNA-DTFFDFDKSTLKPEGRQLLDQVAQQASGIDLETIIAVGHT 99
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
DSIGT N +S+ RA +KSYL+ +GV
Sbjct: 100 DSIGTEAYNQKLSERRAASVKSYLVSKGVDP 130
>gi|68637975|emb|CAI72626.1| putative outer membrane protein A [Bordetella petrii]
Length = 138
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + + + + L+ + +L +A + I HT
Sbjct: 41 VAQAPAKPTPMATKVVFNA-DTFFDFDKSTLKPEGRQLLDQVAQQASGIDLETIIAVGHT 99
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
DSIGT N +S+ RA +KSYL+ +GV
Sbjct: 100 DSIGTEAYNQKLSERRAASVKSYLVSKGVDP 130
>gi|228906609|ref|ZP_04070485.1| hypothetical protein bthur0013_7860 [Bacillus thuringiensis IBL
200]
gi|228853158|gb|EEM97936.1| hypothetical protein bthur0013_7860 [Bacillus thuringiensis IBL
200]
Length = 201
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 40/109 (36%), Gaps = 3/109 (2%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDI-VNKRFGSSLDKAEDEFQMQ 57
M K + L + M +S C + + K++ + D I V + SS K E+ + +
Sbjct: 1 MKKYILYPLMLLTMLFLSACSNSVQPKEENDVQSIKDVAIKVPENIFSSSKKNENISEDE 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ + I S S+ + + LQ + + +
Sbjct: 61 MKQNIKSYLNYSGELDENIVPLSSTTSDENITESDREKLQKLIELAKQN 109
>gi|126649689|ref|ZP_01721925.1| peptide ABC transporter, peptide-binding protein [Bacillus sp.
B14905]
gi|126593408|gb|EAZ87353.1| peptide ABC transporter, peptide-binding protein [Bacillus sp.
B14905]
Length = 607
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 11/97 (11%), Positives = 28/97 (28%), Gaps = 3/97 (3%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L + M ++ C +K + + ++ G S + + M+
Sbjct: 1 MKKNWLILSILFAFMLVLAACSGGGNGSEKGTETGNTEKSGETEKAGESEETKDSLLPME 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
+ + G + + + L +
Sbjct: 61 VTNEGDAIQGGTLRVGLVTSSPFQGIFNWELYEDAYD 97
>gi|301597288|ref|ZP_07242296.1| OmpA/MotB domain protein [Acinetobacter baumannii AB059]
Length = 216
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ QL I D + I L + +L +A LNK +
Sbjct: 128 QLFSQLSVNQAEQKIIDDALKNRIIE--FESGSAVLTEAGQKILDEMAVALNKVGGKKVK 185
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLI 142
I HTDS G NL +SQ+RA +K+YLI
Sbjct: 186 IVGHTDSSGDATKNLKLSQDRALAVKNYLI 215
>gi|331014043|gb|EGH94099.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 56
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 21/46 (45%)
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
F ++ L+ + +A L + P + ++ +TDS G+ N
Sbjct: 10 FNNKADLKPTAQGDIGKLAAFLQENPDRKVIVEGYTDSTGSASYNQ 55
>gi|119469103|ref|ZP_01612087.1| chitinase [Alteromonadales bacterium TW-7]
gi|119447355|gb|EAW28623.1| chitinase [Alteromonadales bacterium TW-7]
Length = 1236
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 29/48 (60%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA 50
K+L ++ I +++GCG +S++++++ + + N + + ++D+
Sbjct: 16 KKLLIAAAITASLTGCGGSSKDEEELAIPQPNQAPVADAGVDQTVDEQ 63
>gi|282911063|ref|ZP_06318865.1| lipoprotein [Staphylococcus aureus subsp. aureus WBG10049]
gi|282324758|gb|EFB55068.1| lipoprotein [Staphylococcus aureus subsp. aureus WBG10049]
Length = 302
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ L + +SGC + E K + + AE + +
Sbjct: 1 MLKKAKLILIATLLLSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFSLKVKA 83
>gi|58616636|ref|YP_195845.1| outer membrane protein [Achromobacter xylosoxidans A8]
gi|190571962|ref|YP_001967686.1| hypothetical protein pCNB_p42 [Comamonas testosteroni CNB-1]
gi|311109703|ref|YP_003982555.1| outer membrane protein 2 [Achromobacter xylosoxidans A8]
gi|58416234|emb|CAI47829.1| outer membrane protein [Achromobacter xylosoxidans]
gi|119943700|gb|ABM06222.1| hypothetical protein [Comamonas testosteroni CNB-1]
gi|310764392|gb|ADP19840.1| outer membrane protein 2 [Achromobacter xylosoxidans A8]
Length = 147
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 28/111 (25%), Gaps = 5/111 (4%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
S A +L + I S S
Sbjct: 37 VLTAVSVSFSDSSTTFRPDA-----STAELLAEAKGATIIYVSGRTSTLRPSAADEALAL 91
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R + + S I V + + N T GR NQR++I++
Sbjct: 92 RRALSARQYLIARGVSPLKIMVNFASASDFVADNSTPEGRHQNQRVDIEVI 142
>gi|302340616|ref|YP_003805822.1| hypothetical protein Spirs_4148 [Spirochaeta smaragdinae DSM 11293]
gi|301637801|gb|ADK83228.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Spirochaeta smaragdinae DSM 11293]
Length = 832
Score = 43.1 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 49/137 (35%), Gaps = 16/137 (11%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML-------QLIATILNKFPSTVIAIQS 115
I++ + +P + L+ ML + I +++PS + ++
Sbjct: 688 ILLVKKDGKFYLSVPNVIFGAYRSELDSAGAEMLTRNNQTIDRVVGIYDRYPSYDLILEG 747
Query: 116 HTDSIGT--------LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
H +I +++ RA +K+ L+ + S I + F ++P
Sbjct: 748 HALNIYRGTGREAREEAILQPLTERRAATVKNALVDQ-GMSEEKIETQAFGGRFPNADVT 806
Query: 168 TKVGRQNNQRIEIQIFP 184
+ +R+E + P
Sbjct: 807 DRSLWWKVRRVEFVMVP 823
>gi|228899537|ref|ZP_04063793.1| hypothetical protein bthur0014_7590 [Bacillus thuringiensis IBL
4222]
gi|228860127|gb|EEN04531.1| hypothetical protein bthur0014_7590 [Bacillus thuringiensis IBL
4222]
Length = 201
Score = 43.1 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 40/109 (36%), Gaps = 3/109 (2%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDI-VNKRFGSSLDKAEDEFQMQ 57
M K + L + M +S C + + K++ + D I V + SS K E+ + +
Sbjct: 1 MKKYILYPLMLLTMLFLSACSNSVQPKEENDVQSIKDVAIKVPENIFSSSKKNENISEDE 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ + I S S+ + + LQ + + +
Sbjct: 61 MKQNIKSYLNYSGELDENIVPLSSTTSDENITESDREKLQKLIELAKQN 109
>gi|126650660|ref|ZP_01722883.1| hypothetical protein BB14905_08718 [Bacillus sp. B14905]
gi|126592816|gb|EAZ86815.1| hypothetical protein BB14905_08718 [Bacillus sp. B14905]
Length = 326
Score = 43.1 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 27/106 (25%), Gaps = 8/106 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ----- 55
M K L +S+ M ++ C K + T+ + E+ +
Sbjct: 1 MKKLLIISVAAMALLAACQDKEPAKGNTTNSEETKTESAATDNTTKEQAQEELTKGQEMA 60
Query: 56 ---MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
G V + + +++ ++
Sbjct: 61 TILSATNWQGTKVYDKDNNDLTEENSNFIGLAKYDVKTGHYEFFDA 106
>gi|88608624|ref|YP_506755.1| putative peptidoglycan-associated lipoprotein [Neorickettsia
sennetsu str. Miyayama]
gi|88600793|gb|ABD46261.1| putative peptidoglycan-associated lipoprotein [Neorickettsia
sennetsu str. Miyayama]
Length = 208
Score = 43.1 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 27/214 (12%), Positives = 56/214 (26%), Gaps = 45/214 (21%)
Query: 1 MIKELGLSMF-IMTTISGC-----------GLASREKKKVFLHKSNDTDIV---NKRFGS 45
M + + +++F + +SGC + + N T + +
Sbjct: 1 MSRIVSVAVFSALLLLSGCLHINTSRRGGPASSQFADVECQCPAKNGTVAIIHFRSGEST 60
Query: 46 SLDKAEDEFQMQLQD---------TGIVVSRIGDMITCYIPVHVSFVSEV-------FLE 89
+L +A + + + V G P + + + +L
Sbjct: 61 ALPEARQLIYENIAECIALRISENPNLKVLITGHTDKLETPENSLGLGKERAITVLEYLL 120
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
L +A FP I + K + S D + +
Sbjct: 121 GDVFENLNDLAQEFGSFP------------ISSEKVDNSGSTGDLDNVTQAVSFSKDVLR 168
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRI--EIQ 181
+D DT+ N+R+ E
Sbjct: 169 NHFCTASAGKDKLVDEGDTEEAHARNRRVIIEFV 202
>gi|148267969|ref|YP_001246912.1| hypothetical protein SaurJH9_1542 [Staphylococcus aureus subsp.
aureus JH9]
gi|150394034|ref|YP_001316709.1| hypothetical protein SaurJH1_1573 [Staphylococcus aureus subsp.
aureus JH1]
gi|257795460|ref|ZP_05644439.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258413268|ref|ZP_05681544.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258420627|ref|ZP_05683569.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258444819|ref|ZP_05693148.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258447348|ref|ZP_05695492.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|258449768|ref|ZP_05697869.1| lipoprotein [Staphylococcus aureus A6224]
gi|258454563|ref|ZP_05702527.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|269203111|ref|YP_003282380.1| hypothetical protein SAAV_1474 [Staphylococcus aureus subsp.
aureus ED98]
gi|282892985|ref|ZP_06301220.1| hypothetical protein SGAG_00339 [Staphylococcus aureus A8117]
gi|282928015|ref|ZP_06335624.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|295407235|ref|ZP_06817035.1| hypothetical protein SMAG_02408 [Staphylococcus aureus A8819]
gi|297244659|ref|ZP_06928542.1| hypothetical protein SLAG_00744 [Staphylococcus aureus A8796]
gi|147741038|gb|ABQ49336.1| protein of unknown function DUF1672 [Staphylococcus aureus subsp.
aureus JH9]
gi|149946486|gb|ABR52422.1| protein of unknown function DUF1672 [Staphylococcus aureus subsp.
aureus JH1]
gi|257789432|gb|EEV27772.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257839832|gb|EEV64300.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257843575|gb|EEV67982.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257850312|gb|EEV74265.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257853539|gb|EEV76498.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|257857016|gb|EEV79916.1| lipoprotein [Staphylococcus aureus A6224]
gi|257862946|gb|EEV85710.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|262075401|gb|ACY11374.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus ED98]
gi|282590312|gb|EFB95392.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282764982|gb|EFC05107.1| hypothetical protein SGAG_00339 [Staphylococcus aureus A8117]
gi|285817166|gb|ADC37653.1| hypothetical protein SA2981_1442 [Staphylococcus aureus 04-02981]
gi|294967948|gb|EFG43977.1| hypothetical protein SMAG_02408 [Staphylococcus aureus A8819]
gi|297178689|gb|EFH37935.1| hypothetical protein SLAG_00744 [Staphylococcus aureus A8796]
gi|312829875|emb|CBX34717.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129204|gb|EFT85199.1| hypothetical protein CGSSa03_07171 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329727147|gb|EGG63603.1| putative lipoprotein [Staphylococcus aureus subsp. aureus 21172]
Length = 318
Score = 43.1 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 1/92 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ L + +SGC E KK ++N + FQ +
Sbjct: 1 MLKKAKLILIAALVLSGCSTIENESKKDRNTETNTETKSVPEEMEASKYVGQGFQPPAEK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
I ++ F+ L+ K
Sbjct: 61 DAIEFAKK-HKDKIAKRGEQFFMDNFGLKVKA 91
>gi|163789217|ref|ZP_02183659.1| hypothetical protein FBALC1_00030 [Flavobacteriales bacterium
ALC-1]
gi|159875432|gb|EDP69494.1| hypothetical protein FBALC1_00030 [Flavobacteriales bacterium
ALC-1]
Length = 238
Score = 43.1 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ + + L L + + + I+I D G+ NL++SQ+RAD I
Sbjct: 24 EVYFDTDKYNIPETEHSRLLLFLSKVEEMDIEKISIYGFCDDRGSDNYNLVLSQQRADAI 83
Query: 138 KSYLIQRGVSSNRFISVRGFAY--KYPIDTNDTKVGRQNNQRIEIQIFP 184
K+ + +V G + + R N+++EI + P
Sbjct: 84 KTVFSNNEFDESVITNVDGKGEILLNIVHEENLSKIRGLNRKVEIIVKP 132
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN 126
+ GD I + +L K+ P+L IA IL + + I+ H ++
Sbjct: 155 KEGDKILL--DNLLFRTGYSYLTKESKPVLDKIAVILAERTNVYFTIEGHVCCTQGERDA 212
Query: 127 LLI 129
+
Sbjct: 213 IDR 215
>gi|15924476|ref|NP_372010.1| hypothetical protein SAV1486 [Staphylococcus aureus subsp. aureus
Mu50]
gi|156979805|ref|YP_001442064.1| hypothetical protein SAHV_1474 [Staphylococcus aureus subsp.
aureus Mu3]
gi|255006271|ref|ZP_05144872.2| hypothetical protein SauraM_07380 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|14247257|dbj|BAB57648.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50]
gi|156721940|dbj|BAF78357.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 318
Score = 43.1 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 1/92 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ L + + +SGC E KK ++N + FQ +
Sbjct: 1 MLKKAKLILIAVLVLSGCSTIENESKKDRNTETNTETKSVPEEMEASKYVGQGFQPPAEK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
I S+ F+ L+ K
Sbjct: 61 DAIEFSKK-HKDKIAKRGEQFFMDNFGLKVKA 91
>gi|145295271|ref|YP_001138092.1| hypothetical protein cgR_1212 [Corynebacterium glutamicum R]
gi|140845191|dbj|BAF54190.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 187
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 57/173 (32%), Gaps = 11/173 (6%)
Query: 2 IKEL-GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K + +++ + +SGC S + + F +S +I+ + + + ++
Sbjct: 11 MKRICAVAISSVLLLSGCSSTSTTQLEGFDGRSAQ-EIITELDQTPVADRATNLMASIRA 69
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKK----FLPMLQLIATILNKFPSTVIAIQSH 116
+++S ++ +P ++S F L L P + + +
Sbjct: 70 DELILSDQSGQLSIDMPADEFYISAAPYTTTTHECFYHSLTTCTGELANTP-VKVTVVAD 128
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
++ + + + R + + I G PI T D
Sbjct: 129 NGETILEEDTI----TYDNGFVGMWLPRNIDATLTIEHDGLKSTQPISTGDDA 177
>gi|21323895|dbj|BAB98521.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
Length = 198
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 57/173 (32%), Gaps = 11/173 (6%)
Query: 2 IKEL-GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K + +++ + +SGC S + + F +S +I+ + + + ++
Sbjct: 22 MKRICAVAISSVLLLSGCSSTSTTQLEGFDGRSAQ-EIITELDQTPVADRATNLMASIRA 80
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKK----FLPMLQLIATILNKFPSTVIAIQSH 116
+++S ++ +P ++S F L L P + + +
Sbjct: 81 DELILSDQSGQLSIDMPADEFYISAAPYTTTTHECFYHSLTTCTGELANTP-VKVTVVAD 139
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
++ + + + R + + I G PI T D
Sbjct: 140 NGETILEEDTI----TYDNGFVGMWLPRNIDATLTIEHDGLKSTQPISTGDDA 188
>gi|87307403|ref|ZP_01089548.1| probable MotB-like protein [Blastopirellula marina DSM 3645]
gi|87290143|gb|EAQ82032.1| probable MotB-like protein [Blastopirellula marina DSM 3645]
Length = 257
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 40/130 (30%), Gaps = 8/130 (6%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
V I + + + F L + LQ+ A P I I+ H
Sbjct: 101 GDSPQVRIIRPGSSTAVGTVIYFPGESAKLTDEMKRDLQVQAQEFGGKPQ-KIEIRGHAA 159
Query: 119 SIG-----TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
++ + ER + ++L+ R I + PI + +
Sbjct: 160 PKPLAPGAPFVDHYDLGYERCRAVMNFLVSL-GIDPRRIRISTAGKNEPIHIGTDPLKSK 218
Query: 174 NNQRIEIQIF 183
N R+E+ +
Sbjct: 219 QNPRVEVFLL 228
>gi|315195385|gb|EFU25772.1| putative lipoprotein [Staphylococcus aureus subsp. aureus CGS00]
Length = 301
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ L + +SGC + E K + + AE + +
Sbjct: 1 MLKKAKLILIATLLLSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFSLKVKA 83
>gi|49483673|ref|YP_040897.1| lipoprotein [Staphylococcus aureus subsp. aureus MRSA252]
gi|257425550|ref|ZP_05601975.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428209|ref|ZP_05604607.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257430839|ref|ZP_05607221.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|257433598|ref|ZP_05609956.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257436439|ref|ZP_05612486.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus M876]
gi|282904068|ref|ZP_06311956.1| putative lipoprotein [Staphylococcus aureus subsp. aureus C160]
gi|282905834|ref|ZP_06313689.1| lipoprotein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282914276|ref|ZP_06322063.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M899]
gi|282919201|ref|ZP_06326936.1| lipoprotein [Staphylococcus aureus subsp. aureus C427]
gi|282924383|ref|ZP_06332057.1| lipoprotein [Staphylococcus aureus subsp. aureus C101]
gi|283958250|ref|ZP_06375701.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293501301|ref|ZP_06667152.1| lipoprotein [Staphylococcus aureus subsp. aureus 58-424]
gi|293510263|ref|ZP_06668971.1| lipoprotein [Staphylococcus aureus subsp. aureus M809]
gi|293526858|ref|ZP_06671542.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M1015]
gi|295427994|ref|ZP_06820626.1| lipoprotein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297591034|ref|ZP_06949672.1| lipoprotein [Staphylococcus aureus subsp. aureus MN8]
gi|49241802|emb|CAG40493.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257272007|gb|EEV04145.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275050|gb|EEV06537.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278967|gb|EEV09586.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|257281691|gb|EEV11828.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257284721|gb|EEV14841.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus M876]
gi|282313770|gb|EFB44163.1| lipoprotein [Staphylococcus aureus subsp. aureus C101]
gi|282317011|gb|EFB47385.1| lipoprotein [Staphylococcus aureus subsp. aureus C427]
gi|282322344|gb|EFB52668.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M899]
gi|282331126|gb|EFB60640.1| lipoprotein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282595686|gb|EFC00650.1| putative lipoprotein [Staphylococcus aureus subsp. aureus C160]
gi|283790399|gb|EFC29216.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920416|gb|EFD97480.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M1015]
gi|291096306|gb|EFE26567.1| lipoprotein [Staphylococcus aureus subsp. aureus 58-424]
gi|291467207|gb|EFF09725.1| lipoprotein [Staphylococcus aureus subsp. aureus M809]
gi|295128352|gb|EFG57986.1| lipoprotein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297575920|gb|EFH94636.1| lipoprotein [Staphylococcus aureus subsp. aureus MN8]
Length = 301
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ L + +SGC + E K + + AE + +
Sbjct: 1 MLKKAKLILIATLLLSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFSLKVKA 83
>gi|320577070|gb|ADW54044.1| outer membrane protein A [Sodalis glossinidius]
Length = 267
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + L + + L+ + + +TD IGT + N +SQERA
Sbjct: 189 SDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRIGTEQYNQKLSQERA 248
Query: 135 DVIKSYLIQRGVSSNRF 151
+ SYL+ +G+ S++
Sbjct: 249 QSVVSYLVSKGIPSDKI 265
>gi|253733266|ref|ZP_04867431.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH130]
gi|253728806|gb|EES97535.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH130]
Length = 304
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L + M +SGC + E K + + AE + +
Sbjct: 1 MFKRIKLILIAMIILSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|330946477|gb|EGH47518.1| OmpA family protein [Pseudomonas syringae pv. pisi str. 1704B]
Length = 63
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 154 VRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
+ G + P+ TN+ GR N+R+E+ +
Sbjct: 34 IVGLGDEMPVATNEIDDGRIKNRRVEVWV 62
>gi|91223832|ref|ZP_01259096.1| outer membrane protein [Vibrio alginolyticus 12G01]
gi|91191324|gb|EAS77589.1| outer membrane protein [Vibrio alginolyticus 12G01]
Length = 206
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 17/156 (10%), Positives = 52/156 (33%), Gaps = 2/156 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ + ++ ++ ++GC + + + + + + A+ + +
Sbjct: 1 MDKFAVTSLLVFMLAGCAESPDTTLTTYQYNDLKDNDSDGVINQRDNCADTPKGVVVDSE 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G + E + L + +L P+ + + T
Sbjct: 61 GCANWVNDSQTHLI--SFFFAMDEHQVTPSHDMPLSELKALLQSNPNAQVILIGDTSPEA 118
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+L+ N ++++R I+ L++ G+ NR +
Sbjct: 119 SLEYNKALAKKRTAAIRELLVRNGIQDNRIEEQEFY 154
>gi|34540490|ref|NP_904969.1| immunoreactive 43 kDa antigen PG32 [Porphyromonas gingivalis W83]
gi|37538316|sp|Q9S3R9|OMP41_PORGI RecName: Full=Outer membrane protein 41; Short=Omp41; AltName:
Full=PG32; Flags: Precursor
gi|34396803|gb|AAQ65868.1| immunoreactive 43 kDa antigen PG32 [Porphyromonas gingivalis W83]
Length = 391
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 9/110 (8%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++K L L +A + + I + + D G + N +S+
Sbjct: 287 ILTEKAVLFRFDSHVVDKDQLINLYDVAQFVKETNE-PITVVGYADPTGNTQYNEKLSER 345
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAY-KYPIDTNDTKVGRQNNQRIEIQ 181
RA + L + + ISV P + N R+ I
Sbjct: 346 RAKAVVDVLTGKYGVPSELISVEWKGDSTQPFSK------KAWN-RVVIV 388
>gi|309799869|ref|ZP_07694075.1| D-alanyl-D-alanine carboxypeptidase family [Streptococcus infantis
SK1302]
gi|308116516|gb|EFO53986.1| D-alanyl-D-alanine carboxypeptidase family [Streptococcus infantis
SK1302]
Length = 238
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 12/107 (11%), Positives = 29/107 (27%), Gaps = 2/107 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L LS + T++ C + T S + ++ + ++ +
Sbjct: 1 MKKRYLILSGLLALTLAACSQEKTATTEAKSSTEQKTVQEGTAGSKSQEASQKKAEVVNK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
+ D I + L + ++ +
Sbjct: 61 GDHYSIQGKYDEIVVANKHYPMSKDYNPGENPTAKAELLKLIAVMQQ 107
>gi|117619828|ref|YP_857957.1| aminopeptidase Y [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117561235|gb|ABK38183.1| aminopeptidase Y [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 355
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 34/123 (27%), Gaps = 4/123 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L+ I ++GC +S + + + +V + A
Sbjct: 1 MKHTALAFAITALLAGCNTSSNDSQAPSAAEQAYEYLVQLSSTAEGIGARPTGGEAETRA 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ + ++ Q + L VI I +H DS G
Sbjct: 61 AAWIQDHLAGWGYEVQNQPFTYTKS----GASKTSQNLVAELKGSSDKVILIGAHYDSTG 116
Query: 122 TLK 124
K
Sbjct: 117 DKK 119
>gi|15615372|ref|NP_243675.1| hypothetical protein BH2809 [Bacillus halodurans C-125]
gi|10175430|dbj|BAB06528.1| BH2809 [Bacillus halodurans C-125]
Length = 197
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 43/123 (34%), Gaps = 5/123 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE-DEFQMQLQ 59
M K + +++ + ++ C KK +N+ + S + + + +L
Sbjct: 1 MFKYIRVTILFLFVLTACQTDIENKKLDQTSSTNNVSAEAEEPMSESKEQKIVSLEDKLF 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML---QLIATILNKFPSTVIAIQSH 116
++ +M + F + + +L + ++P ++I I +
Sbjct: 61 PPKFSITHF-EMTYLKDKNQLLFNMNYEFDSEIYDILTDGNQDIHFILEYPESIIDILNQ 119
Query: 117 TDS 119
+ S
Sbjct: 120 SHS 122
>gi|330861238|emb|CBX71489.1| hypothetical protein YEW_CQ10840 [Yersinia enterocolitica W22703]
Length = 239
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK-----NNLLISQERADVIKSYLIQRGV 146
+L+ IA ILN P+ I++ HTD + +N +S +RA+ + L+ G+
Sbjct: 1 MRDILRAIAPILNDIPN-KISLSGHTDDLPYASGERGYSNWELSADRANASRRELLAGGL 59
Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
+ + V G A + + N+RI I + +
Sbjct: 60 DEGKVLRVVGMASTMRLKEQASDD--PVNRRISILVLNKQT 98
>gi|296282947|ref|ZP_06860945.1| hypothetical protein CbatJ_04973 [Citromicrobium bathyomarinum
JL354]
Length = 616
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 12/104 (11%), Positives = 30/104 (28%), Gaps = 9/104 (8%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKS-NDTDIVNKRFGSSLDKAEDE-FQMQLQDT 61
+ + + ++ C E + + V + D+ + +M
Sbjct: 9 QTAIVLLASLGLAACATTQTETSTAPVASAEAPAAQVPADIDTLFDRYDAAQLEMSPLTK 68
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
R D T F + + ++ +LQ A + +
Sbjct: 69 AYRGIRDEDYGTWGD-----FSDQAEVREQA--LLQDTAAAMRE 105
>gi|188994593|ref|YP_001928845.1| outer membrane protein 41 precursor [Porphyromonas gingivalis ATCC
33277]
gi|53828382|dbj|BAD54749.1| hypothetical protein [Porphyromonas gingivalis]
gi|188594273|dbj|BAG33248.1| outer membrane protein 41 precursor [Porphyromonas gingivalis ATCC
33277]
Length = 391
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 9/110 (8%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++K L L +A + + I + + D G + N +S+
Sbjct: 287 ILTEKAVLFRFDSHVVDKDQLINLYDVAQFVKETNE-PITVVGYADPTGNTQYNEKLSER 345
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAY-KYPIDTNDTKVGRQNNQRIEIQ 181
RA + L + + ISV P + N R+ I
Sbjct: 346 RAKAVVDVLTGKYGVPSELISVEWKGDSTQPFSK------KAWN-RVVIV 388
>gi|333010781|gb|EGK30207.1| lateral flagellar motor protein B [Shigella flexneri K-272]
gi|333021279|gb|EGK40532.1| lateral flagellar motor protein B [Shigella flexneri K-227]
Length = 256
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E +M++ G+ V D ++ + F +L +A + +
Sbjct: 91 EANLEMEIVPQGLRVLIKDDQ-----NRNMFERGSAQIMPFFKTLLVELAPVFDSL-DNK 144
Query: 111 IAIQSHTDSI---GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
I I HTD++ + NN +S +RA + L + G+ ++ + V A + +D +
Sbjct: 145 IIITGHTDAMANKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKN 204
Query: 168 TKVGRQNNQRIEIQIFPR 185
+ N+RIEI + +
Sbjct: 205 PQS--AGNRRIEIMVLTK 220
>gi|307246105|ref|ZP_07528187.1| hypothetical protein appser1_13080 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307255086|ref|ZP_07536904.1| hypothetical protein appser9_13200 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259523|ref|ZP_07541248.1| hypothetical protein appser11_13200 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|157837298|gb|ABV82725.1| OmpA [Actinobacillus pleuropneumoniae]
gi|306853040|gb|EFM85263.1| hypothetical protein appser1_13080 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306861959|gb|EFM93935.1| hypothetical protein appser9_13200 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866459|gb|EFM98322.1| hypothetical protein appser11_13200 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 230
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 53/178 (29%), Gaps = 27/178 (15%)
Query: 39 VNKRFGSSLDKAED-------EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ + D E EF +L+D + + P + L
Sbjct: 45 AKRVADNYQDNQEKIYQALQTEFSPKLKDWKAKIDKDTLTFIFTDPEVLFETGRSDLNAP 104
Query: 92 FLPMLQLIA-TILNKFPSTV-----IAIQSHTDSIGTLKNNLLI--------SQERADVI 137
F +L + + I I+ HT + K++ + SQ+R +
Sbjct: 105 FKKILDDFFPRYMKVVDNYKTSISEIRIEGHTSTEWDHKSSDDMAYFLNMQLSQDRTRSV 164
Query: 138 KSYLIQRGVSSNRF------ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
YL Q + +S G + I ++ ++R+ +I +
Sbjct: 165 LIYLYQLENIAQYRDWIKSNLSAVGLSSSKTIKNTQGIEDKEASKRVTFRIITNAEEQ 222
>gi|313157808|gb|EFR57219.1| OmpA family protein [Alistipes sp. HGB5]
Length = 376
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 10/108 (9%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERAD 135
+ + + + L P + I + D+ G+ NL IS+ RA+
Sbjct: 275 ENIFFRIGSSQIRTTEEAKVGALVEYLKANPEANVEIVGYADAATGSHAVNLKISKLRAE 334
Query: 136 VIKSYLIQRGVSSNRFISVRGFAYK-YPIDTNDTKVGRQNNQRIEIQI 182
+ + +++ + IS G P G + N R+ I I
Sbjct: 335 SVAA-ALKKAGIAASRISAEGRGDTAQPF------PGVEKN-RVSICI 374
>gi|294675563|ref|YP_003576178.1| chemotaxis protein MotB [Rhodobacter capsulatus SB 1003]
gi|294474383|gb|ADE83771.1| chemotaxis protein MotB [Rhodobacter capsulatus SB 1003]
Length = 283
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 62/192 (32%), Gaps = 27/192 (14%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG------------I 63
+G +++ S K+ + D+ E + L T I
Sbjct: 97 TGASGQMPTEERQARGDSGAAKEEQKQDQAEFDRMAKEIEKALSATSGESMVSEQLARHI 156
Query: 64 VVSRIGDMITCY---IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV---IAIQSHT 117
V + + + F + + P+L IA +L + +AI HT
Sbjct: 157 VTKVTDEGLIVEFFDLEDEPLFRPD---TAEPEPILGEIAGMLTRVFGLTKNNVAINGHT 213
Query: 118 DSIG---TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
S +S ERA ++ + G + R V GFA + P V
Sbjct: 214 RSYPSMLRTNPVWDLSSERAQRMRILMETAGFDAARLQRVSGFADRKPAVETRMSV---R 270
Query: 175 NQRIEIQIFPRG 186
N R+E+ + G
Sbjct: 271 NNRLELILLRNG 282
>gi|257126150|ref|YP_003164264.1| redoxin [Leptotrichia buccalis C-1013-b]
gi|257050089|gb|ACV39273.1| Redoxin domain protein [Leptotrichia buccalis C-1013-b]
Length = 216
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 8/73 (10%), Positives = 28/73 (38%), Gaps = 6/73 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L ++ CG + + ++ N + LD + + +++
Sbjct: 1 MKKILLLGIAAVVLAACGNKPKTQNEIGQAG------QNAEYTQYLDTLKADNNLKITMG 54
Query: 62 GIVVSRIGDMITC 74
+ ++ +G +
Sbjct: 55 KVPITIVGKELKV 67
>gi|218887301|ref|YP_002436622.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758255|gb|ACL09154.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 311
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 56/182 (30%), Gaps = 49/182 (26%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFP 107
+ D + + + + + + F + L + P+L ++A +L ++
Sbjct: 130 ELPPGIDRSTLDKNLRILEHPEGVVLALTDDLLFAPGQWQLREASRPLLGMLAEVL-EYV 188
Query: 108 STVIAIQSHTDSIGT--------------------LKNNLLISQERADVIKSYLIQRGVS 147
+ +AI H+D ++ RA + Y +QR +
Sbjct: 189 TADVAIAGHSDPRTEGVSALEQAAGAGGGAGVVTGDAIGYELAGRRALTVLEYFVQRKLD 248
Query: 148 SNRFISVRGFAYKYP----------------------IDTNDTKVGRQNNQRIEIQI--F 183
R SV G+ P + R N+R+EI +
Sbjct: 249 PAR-FSVAGYGPDRPSLAGQPPSPGAPGVPEASGEPDAAAGSSDPDR--NRRVEILVKTT 305
Query: 184 PR 185
PR
Sbjct: 306 PR 307
>gi|153808398|ref|ZP_01961066.1| hypothetical protein BACCAC_02692 [Bacteroides caccae ATCC 43185]
gi|149128720|gb|EDM19937.1| hypothetical protein BACCAC_02692 [Bacteroides caccae ATCC 43185]
Length = 274
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 17/172 (9%)
Query: 15 ISGCGLA-SREKKKVFLHK-SNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMI 72
+ G + +KV + + + Q + ++ IVV + I
Sbjct: 116 LVGLSFTLGKSSRKVAPVSYEPEQPVSVTTVEQRPEPIPVVEQSKPKEDKIVVEPMKQNI 175
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD-SIGTLKNNLLISQ 131
++ ++ + + + L K P+ I I + D + G N +S+
Sbjct: 176 -------FFALNSARIQDEQQQKISSLVEYLEKNPAAKICITGYADVNTGNATINFKLSE 228
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA + ++ + I V + T + N R+ I I
Sbjct: 229 ARAKNVAE-ALKSKGIAADRIKVDFKGDT--VQPYSTP---KEN-RVSICIT 273
>gi|84502672|ref|ZP_01000791.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola
batsensis HTCC2597]
gi|84389067|gb|EAQ01865.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola
batsensis HTCC2597]
Length = 681
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 19/158 (12%), Positives = 43/158 (27%), Gaps = 18/158 (11%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT-------- 73
+ + EDE + LQ ++
Sbjct: 497 DTRDSQEVEVNELPQVTDTRNRIDFQSAQEDELRAALQARAPEAVDRRFSLSQVRNINAV 556
Query: 74 ------CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIAIQSHTDSIGTL 123
+ + L + ++ + P + I+ HTD++G+
Sbjct: 557 RQLVPEIDVDNINFETGSAVIRPAEAEELARLGQLMRERIEENPGEIFLIEGHTDAVGSG 616
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
NL +S RA+ + L + + ++G+
Sbjct: 617 SYNLALSDRRAESVALALTEYFDVPPENMVIQGYGETD 654
>gi|254523963|ref|ZP_05136018.1| conserved hypothetical protein, putative [Stenotrophomonas sp. SKA14]
gi|219721554|gb|EED40079.1| conserved hypothetical protein, putative [Stenotrophomonas sp. SKA14]
Length = 2015
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 46/128 (35%), Gaps = 2/128 (1%)
Query: 29 FLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFL 88
+ + S+ + + +QD +++ + + + + +
Sbjct: 1871 ARAAVVRDALQAEVAESARAGLTVQLRTDVQDPHSLLAGVDANGAL-LGNVLFDTDKAAV 1929
Query: 89 EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVS- 147
++F P+L IA L K +++ HTD G+ N + RA + L +
Sbjct: 1930 REEFKPLLAAIAARLEKMGGGQVSLVGHTDVRGSHAYNQALGLRRASAVFEALRSQLSPA 1989
Query: 148 SNRFISVR 155
+ + VR
Sbjct: 1990 VQQRLRVR 1997
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 7/57 (12%), Positives = 22/57 (38%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ + + + L + P+L +A ++N++ + I ++ +S
Sbjct: 1810 SPQASAERMELALGEVLFAPGSSELRADYRPVLLKMAEVVNRYQGGDVVIAANGESQ 1866
>gi|304439749|ref|ZP_07399647.1| oligopeptide ABC superfamily ATP binding cassette transporter,
binding protein [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371736|gb|EFM25344.1| oligopeptide ABC superfamily ATP binding cassette transporter,
binding protein [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 612
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 10/84 (11%), Positives = 26/84 (30%), Gaps = 9/84 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K++ L + ++ CG K + D + + + +
Sbjct: 4 ILKKVSLLLAFAIILTACGNGGANKANGNKANAGDAQQEGS---------KPNMEAVIDN 54
Query: 61 TGIVVSRIGDMITCYIPVHVSFVS 84
G V+ D + + +F
Sbjct: 55 DGDVIDAADDTLRVALISDSTFKG 78
>gi|15643441|ref|NP_228485.1| motility protein B [Thermotoga maritima MSB8]
gi|4981200|gb|AAD35760.1|AE001740_6 motility protein B [Thermotoga maritima MSB8]
Length = 289
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 1/86 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
I V + + V F L + +L + I+ + + V+ + + D
Sbjct: 95 GKITVEERDEGTLIVLKDMVFFEPGSAKLTAEAKELLAKVGQIVIEHTTNVLEVYGYADD 154
Query: 120 IGTLKNNLLISQERADVIKSYLIQRG 145
L N++ +S ++ +
Sbjct: 155 RPPLPNSIYVSNWHLSSARAASVVNF 180
>gi|255264513|ref|ZP_05343855.1| OmpA/MotB [Thalassiobium sp. R2A62]
gi|255106848|gb|EET49522.1| OmpA/MotB [Thalassiobium sp. R2A62]
Length = 272
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 12/171 (7%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVS 81
E+ ++ ++ + + +D+ ++ D G+++ +
Sbjct: 109 GAEQDEISFNQVMEALTALSGESAVIDRMLRHVITRVTDEGLIIE------LFDLEDQPL 162
Query: 82 FVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT---LKNNLLISQERADVIK 138
F+ + + L + + F S +A++ H S N IS RA I+
Sbjct: 163 FIDASDVPTGVMQDLTAMIAQIVGFVSNDLAVEGHVRSQPIVLLKNQNWEISHSRAQAIR 222
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
L Q G + V + P N V N RIEI + G K
Sbjct: 223 LLLQQNGAYPQQMNRVTAHGDREPQYKNPLSV---RNNRIEIIVLRSGEGK 270
>gi|223985685|ref|ZP_03635733.1| hypothetical protein HOLDEFILI_03039 [Holdemania filiformis DSM
12042]
gi|223962376|gb|EEF66840.1| hypothetical protein HOLDEFILI_03039 [Holdemania filiformis DSM
12042]
Length = 315
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 7/76 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-------KAEDEF 54
+K+L + + ++GC A + + + + + +F
Sbjct: 1 MKKLFVFVLTALLVAGCSTAPKTEPSEGGTATPSAAAAINVYTRDATSGTREAFEKAGDF 60
Query: 55 QMQLQDTGIVVSRIGD 70
QL + I VS GD
Sbjct: 61 AEQLTSSAIEVSSNGD 76
>gi|46202522|ref|ZP_00053085.2| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 164
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 59/183 (32%), Gaps = 30/183 (16%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K + ++ + +S C D A L
Sbjct: 1 MKFLHVIAALSALVAVSACAEMEPMAPPTASTPMVAVPPPPPALVVRDDVA-------LP 53
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ +VV ++ + + +L +A L +I IQ TDS
Sbjct: 54 PSPVVV--------------HFNHAKADITGSTMQVLWGLAPALKAAEPGLIRIQGFTDS 99
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-NQRI 178
G N ++S++RA + L + G+++ I V G I K + +R+
Sbjct: 100 SGKAAYNQVLSEKRAQAVAEQLRKLGITA--RIEVTGQG----IVKGGKKGQKDQGARRV 153
Query: 179 EIQ 181
EI
Sbjct: 154 EIT 156
>gi|310816853|ref|YP_003964817.1| OmpA/MotB [Ketogulonicigenium vulgare Y25]
gi|308755588|gb|ADO43517.1| OmpA/MotB [Ketogulonicigenium vulgare Y25]
Length = 284
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 8/167 (4%)
Query: 25 KKKVFLHKSNDTDIVNKRFGSSLDKAEDE-FQMQLQDTGIVVSRIGDMITCYI----PVH 79
+ + + + L E I+ + + +
Sbjct: 120 TARGASAAQSSDILALEDIARVLSGQSGESLVDDAIQRHIITRMTDEGLVIEVFSTPDAP 179
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
V L L ++Q+IA++ + + + GT + ++ RAD I++
Sbjct: 180 VFQPGGTVLTPLSLAIIQMIASVAAQVENGIAVAAHLPQQAGTDQGAWALTAARADTIRA 239
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
L GV+ R V G A + PI + T Q N R+EI + G
Sbjct: 240 ALEGAGVAPVRLRRVTGHADRSPITLDPTV---QRNDRVEITVLRNG 283
>gi|300776237|ref|ZP_07086095.1| possible outer membrane protein [Chryseobacterium gleum ATCC 35910]
gi|300501747|gb|EFK32887.1| possible outer membrane protein [Chryseobacterium gleum ATCC 35910]
Length = 508
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 53/136 (38%), Gaps = 13/136 (9%)
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
++T + V + + ++ + + L L A+I+ + + + HTD
Sbjct: 360 KETAVEVEK-------TLKDIYFNFNKATIRPESNEKLDLAASIIKENGGNYL-LTGHTD 411
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP-IDTNDTKVGRQNNQR 177
G NL +S+ERA + ++ + + RG I + + R +++
Sbjct: 412 IKGNAAYNLRLSKERAAAVV-GALESRGINKNVLKSRGVGSAEATIPASASDAERMADRK 470
Query: 178 IEIQIFPR---GNIKK 190
+ ++ +IKK
Sbjct: 471 VTVRFVESSEWDSIKK 486
>gi|5759277|gb|AAD51067.1|AF175714_1 immunoreactive 43kD antigen PG32 [Porphyromonas gingivalis]
Length = 391
Score = 42.7 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 9/110 (8%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ ++K L L +A + + + + + D G + N +S+
Sbjct: 287 ILTEKAVLFRFDSHVVDKDQLINLYDVAQFVKETNE-PVTVVGYADPTGNTQYNEKLSER 345
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAY-KYPIDTNDTKVGRQNNQRIEIQ 181
RA + L + + ISV P + N R+ I
Sbjct: 346 RAKAVVDVLTGKYGVPSELISVEWKGDSTQPFSK------KAWN-RVVIV 388
>gi|282908805|ref|ZP_06316623.1| predicted protein [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282327069|gb|EFB57364.1| predicted protein [Staphylococcus aureus subsp. aureus WW2703/97]
Length = 103
Score = 42.7 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ L + +SGC + E K + + AE + +
Sbjct: 1 MLKKAKLILIATLLLSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFSLKVKA 83
>gi|5689652|emb|CAB51905.1| OmpA protein [Bordetella petrii]
Length = 152
Score = 42.7 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + + + + L+ + +L +A I HT
Sbjct: 55 VAQAPAKPTPMATKVVFNA-DTFFDFDKSTLKPEGRQLLDQVAQQAQGIDLETIIAVGHT 113
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSS 148
DSIGT K N +S+ RA +KSYL+ +GV
Sbjct: 114 DSIGTEKYNQGLSERRAASVKSYLVSKGVDP 144
>gi|19552354|ref|NP_600356.1| hypothetical protein NCgl1083 [Corynebacterium glutamicum ATCC
13032]
gi|62390018|ref|YP_225420.1| hypothetical protein cg1279 [Corynebacterium glutamicum ATCC 13032]
gi|41325354|emb|CAF19834.1| putative secreted protein [Corynebacterium glutamicum ATCC 13032]
Length = 177
Score = 42.7 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 57/173 (32%), Gaps = 11/173 (6%)
Query: 2 IKEL-GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K + +++ + +SGC S + + F +S +I+ + + + ++
Sbjct: 1 MKRICAVAISSVLLLSGCSSTSTTQLEGFDGRSAQ-EIITELDQTPVADRATNLMASIRA 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKK----FLPMLQLIATILNKFPSTVIAIQSH 116
+++S ++ +P ++S F L L P + + +
Sbjct: 60 DELILSDQSGQLSIDMPADEFYISAAPYTTTTHECFYHSLTTCTGELANTP-VKVTVVAD 118
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
++ + + + R + + I G PI T D
Sbjct: 119 NGETILEEDTI----TYDNGFVGMWLPRNIDATLTIEHDGLKSTQPISTGDDA 167
>gi|254780529|ref|YP_003064942.1| flagellar motor protein MotB [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040206|gb|ACT57002.1| flagellar motor protein MotB [Candidatus Liberibacter asiaticus
str. psy62]
Length = 343
Score = 42.7 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 10/129 (7%)
Query: 61 TGIVVSRIGDMITCYIPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
G++ I I + S + + +LQ I +L + VI+I+ H
Sbjct: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGH 271
Query: 117 TDSIGTL---KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
TD+ ++N +S +RA L++ GVS +R + GFA+ +D
Sbjct: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329
Query: 174 NNQRIEIQI 182
N+RI+I +
Sbjct: 330 ANRRIDILV 338
>gi|15927067|ref|NP_374600.1| hypothetical protein SA1317 [Staphylococcus aureus subsp. aureus
N315]
gi|13701285|dbj|BAB42579.1| hypothetical protein [Staphylococcus aureus subsp. aureus N315]
Length = 318
Score = 42.7 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 1/92 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ L + + +SGC E KK ++N + FQ +
Sbjct: 1 MLKKAKLILIAVLVLSGCSTIENESKKDRNTETNTETKSVPEEMEASKYVGQGFQPPAEK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
I ++ F+ L+ K
Sbjct: 61 DAIEFAKK-HKDKIAKRGEQFFMDNFGLKVKA 91
>gi|291278017|gb|ADD91483.1| outer mebrane protein A [Riemerella columbina]
Length = 326
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 44/160 (27%), Gaps = 16/160 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGS---SLDKAEDEFQM------------QLQDT 61
GC + V D+ + D+ D Q
Sbjct: 166 GCPWPDSDGDGVLDKDDACVDVAGPAENNGCPWPDRDNDGVLDKDDKCPDVPGLVQYNGC 225
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ T + ++ + + L A I+ + HTD+ G
Sbjct: 226 PEPSEVTAERATGALQGIFFNFNKASIRPESDGKLDQAADIIKSSNGGTFLVTGHTDAKG 285
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
NL +S+ERA + + ++ + + RG
Sbjct: 286 NANYNLKLSKERAASVVN-ALEARGVNASQLKSRGVGSAE 324
>gi|281416436|ref|YP_003347356.1| hypothetical protein [Enterococcus phage phiFL4A]
gi|270209612|gb|ACZ64151.1| conserved hypothetical protein [Enterococcus phage phiFL4A]
Length = 176
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 13/119 (10%), Positives = 38/119 (31%), Gaps = 10/119 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MIK G+++ +S C A +K + + I + E+ ++
Sbjct: 4 MIKFAGIALISAALLSACSNAKNNTQKKAETAAQSSTIEASDSNENEPNTEN-ITQAVKQ 62
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF---------LEKKFLPMLQLIATILNKFPSTV 110
+ ++ + +V+ + + + ++ + T ++ T
Sbjct: 63 LEEKFNSDEKLVKIDVKNNVTDDTSDNPHAVITVKVINDEAKKNMEEMQTAIDSNSGTE 121
>gi|332877635|ref|ZP_08445378.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684384|gb|EGJ57238.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 364
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 80 VSFVSEVFLEKKFLP-MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ F + + + P ++ + T+L P I ++ + ++G+ N ++S ERA +
Sbjct: 264 LYFANNKTIPLAYDPTIIDEMVTMLQAHPELSILLEGYASAVGSAAYNNVLSMERAVAVA 323
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L +G+S+ R ++ ID T +R+E+++
Sbjct: 324 QILNAKGISNERILTA-----FKGIDPQATP---AQARRVELRVV 360
>gi|258542353|ref|YP_003187786.1| hypothetical protein APA01_12600 [Acetobacter pasteurianus IFO
3283-01]
gi|256633431|dbj|BAH99406.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256636490|dbj|BAI02459.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256639543|dbj|BAI05505.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256642599|dbj|BAI08554.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645654|dbj|BAI11602.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648707|dbj|BAI14648.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651760|dbj|BAI17694.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654751|dbj|BAI20678.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 125
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
V L+ +L +A + PS ++ ++ + + L + L++ +RA +
Sbjct: 25 VVFFSAGSTELDDNARNVLLQVAEKSKRHPSRIVKVEGYAHAGQDLSADALLAIQRAKAV 84
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
L + GV+ + + P + ++ + ++R+EI++
Sbjct: 85 AQQLSEDGVAGDHIVQT-------PRAPSSSEGMQVGSRRVEIEL 122
>gi|153833397|ref|ZP_01986064.1| putative chemotaxis protein MotB [Vibrio harveyi HY01]
gi|148870285|gb|EDL69215.1| putative chemotaxis protein MotB [Vibrio harveyi HY01]
Length = 219
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 60/192 (31%), Gaps = 33/192 (17%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ L +F + IS V + ++ L GI
Sbjct: 27 SVLLMIFALLLISA---------------LVQISEVYEESQNTRVVIIKGINDALNAAGI 71
Query: 64 VVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQL-------IATILNKFPS--TVIAI 113
V D I + F + L+ L + + I I
Sbjct: 72 EVKADPDTGDISITDSILFDLDDYRLKPSGKEFLNKFIPIYSDVVFQSKATADEVSRIVI 131
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI----SVRGFAYKYPIDTNDTK 169
+ H+ S G+ N+ +S RA+ + +++ + + G PI+ + +
Sbjct: 132 EGHSSSEGSFNRNMELSVLRANSVTAFVNSMRFENKHRFFDKVVISGRG---PIEADQSI 188
Query: 170 VGRQNNQRIEIQ 181
+ ++++++ +
Sbjct: 189 A-QASDRKVKFR 199
>gi|283770559|ref|ZP_06343451.1| lipoprotein [Staphylococcus aureus subsp. aureus H19]
gi|283460706|gb|EFC07796.1| lipoprotein [Staphylococcus aureus subsp. aureus H19]
Length = 301
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 27/92 (29%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ +++ G+ F+ L+ K
Sbjct: 61 HKVKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|282916754|ref|ZP_06324512.1| lipoprotein [Staphylococcus aureus subsp. aureus D139]
gi|282319241|gb|EFB49593.1| lipoprotein [Staphylococcus aureus subsp. aureus D139]
Length = 179
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 27/92 (29%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ +++ G+ F+ L+ K
Sbjct: 61 HKVKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|210614642|ref|ZP_03290253.1| hypothetical protein CLONEX_02467 [Clostridium nexile DSM 1787]
gi|210150632|gb|EEA81641.1| hypothetical protein CLONEX_02467 [Clostridium nexile DSM 1787]
Length = 171
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 17/166 (10%), Positives = 44/166 (26%), Gaps = 17/166 (10%)
Query: 2 IKEL-----GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+K++ L++F +++ CG ++ + G + D ++ +
Sbjct: 1 MKKIKLVGVTLALFCTLSMAACGSTQTGQENQSEP---PAYSQGEMPGGNKDADAEKGKE 57
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQS 115
+L + V + + +A ++S
Sbjct: 58 ELPGNLDDIEAEA---ILGGSVAEFQDGSFQVVPMEADAQTTKLAA-----SGMESTLES 109
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
T S G + + A + + SV +
Sbjct: 110 ITVSYGDDCTFHIANINSATGAVEFEAATASDVKKSTSVYIYGETQ 155
>gi|206603228|gb|EDZ39708.1| Probable OmpA family protein [Leptospirillum sp. Group II '5-way
CG']
Length = 232
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 67/204 (32%), Gaps = 24/204 (11%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSN---DTDIVNKRFGSSLDKAEDEFQMQL- 58
+ L TISGC + +K + IV+ S + + E Q+
Sbjct: 12 RRTLLPALFCLTISGCAHQNGQKSLAPGPDDSNRLPGIIVSGHSRSFHPQQKVESSPQIY 71
Query: 59 ----QDTGIVVSRIGDMI-----------TCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ + V++ + + + L +L + +L
Sbjct: 72 SSPPKTAPVQVAKTTRPVPRPTRSAPAKKLLLQKDIYFSFNSKKISYANLSVLHAYSRLL 131
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK--- 160
K P + + HTD +G K N + ERA + L+ GV + R V K
Sbjct: 132 RKNPRLALRLYGHTDPVGGSKFNHKLGLERALAARRVLLATGVPAKRIF-VFSEGKKLSQ 190
Query: 161 -YPIDTNDTKVGRQNNQRIEIQIF 183
+P V ++ + I++
Sbjct: 191 GFPECKKPNPVCYARDRAVRIKVV 214
>gi|254459054|ref|ZP_05072477.1| type I secretion outer membrane protein, TolC, putative
[Campylobacterales bacterium GD 1]
gi|207084325|gb|EDZ61614.1| type I secretion outer membrane protein, TolC, putative
[Campylobacterales bacterium GD 1]
Length = 604
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 36/123 (29%), Gaps = 2/123 (1%)
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDS 119
G + L L + T + + + + + +
Sbjct: 477 GCKFVYEDTKRIERYSGFLFEDGSANLTGAGQDRLNKLITQIQPYGWDNLKFDVLGNVED 536
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIE 179
+ LL ++ + ++ FI + A P+ +N++ + N R +
Sbjct: 537 EKMTEEQLLQLSQQRAETIKTKLTEAGANVDFIVLHSKADTAPMFSNESDDSIELNNRAD 596
Query: 180 IQI 182
I +
Sbjct: 597 IIV 599
>gi|310764847|gb|ADP09797.1| chemotaxis protein (motility protein B) [Erwinia sp. Ejp617]
Length = 302
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 8/125 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-----KN 125
IT + E +LQ + +L + P+ +++ HTDS+ +
Sbjct: 149 QITDSQERPMFKTGSESPESYMKGILQALVPLLKELPN-SLSLTGHTDSLAYAGGSGGYS 207
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S RA+ + L+ G+ + + V G + + N+RI + I +
Sbjct: 208 NWELSTGRANAARRVLVNAGLDDDHILRVIGTGSRMGLTDIS--ADNPMNRRISVLILSK 265
Query: 186 GNIKK 190
++
Sbjct: 266 LKERQ 270
>gi|304439635|ref|ZP_07399538.1| dipeptide ABC superfamily ATP binding cassette transporter,
binding protein DppA [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371875|gb|EFM25478.1| dipeptide ABC superfamily ATP binding cassette transporter,
binding protein DppA [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 503
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK++ LS+ +M ++ CG K + + D V + LD ++ DT
Sbjct: 3 IKKVILSLALMLVLTACGKTDNANKD---TGAAENDTVRVAIQTELDGLNP-TKITAGDT 58
Query: 62 GIVVSRIGDMITCYIPVHVSFVS---EVFLEKKF 92
V+ +I D + +
Sbjct: 59 ETVLDQIFDGLFDTDKDGKLVGDLAESYEVSDDG 92
>gi|257088814|ref|ZP_05583175.1| predicted protein [Enterococcus faecalis CH188]
gi|256997626|gb|EEU84146.1| predicted protein [Enterococcus faecalis CH188]
gi|315160616|gb|EFU04633.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
gi|315579462|gb|EFU91653.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
Length = 179
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 13/119 (10%), Positives = 38/119 (31%), Gaps = 10/119 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MIK G+++ +S C A +K + + I + E+ ++
Sbjct: 7 MIKFAGIALISAALLSACSNAKNNTQKKAETAAQSSTIEASDSNENEPNTEN-ITQAVKQ 65
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF---------LEKKFLPMLQLIATILNKFPSTV 110
+ ++ + +V+ + + + ++ + T ++ T
Sbjct: 66 LEEKFNSDEKLVKIDVKNNVTDDTSDNPHAVITVKVINDEAKKNMEEMQTAIDSNSGTE 124
>gi|242372524|ref|ZP_04818098.1| nickel (Ni2+)/peptide ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
M23864:W1]
gi|242349741|gb|EES41342.1| nickel (Ni2+)/peptide ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
M23864:W1]
Length = 517
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 46/122 (37%), Gaps = 16/122 (13%)
Query: 1 MIKELGLSM--FIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAEDEFQ 55
M K L +++ ++GCG +S++ K+V + ++ + + + +++ ++
Sbjct: 1 MKKRLLMTLTASATLLLAGCGHSSKDGKQVTVSLPTEAKADQLDAQGYDAAMPVYSAVYE 60
Query: 56 MQLQ-----------DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
++ V G + ++ ++ F L K + A +N
Sbjct: 61 PLVKYDKHKGVKAGLAEKWSVDHSGKVYEFHLKKNIKFSDGSPLNAKAVKFSIDRAKAMN 120
Query: 105 KF 106
K
Sbjct: 121 KN 122
>gi|329902808|ref|ZP_08273256.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium
IMCC9480]
gi|327548603|gb|EGF33260.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium
IMCC9480]
Length = 392
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 10/116 (8%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVI 137
+ L L ++ T N +++ +TD IG+ K NL +S RA I
Sbjct: 278 DITFAFGQATLTAAGKTQLDMLITAANAGGYGSVSVDGYTDQIGSDKVNLALSTARATTI 337
Query: 138 KSYLIQRGVSSNRFISVRGFAYKYPIDT-----NDTKV----GRQNNQRIEIQIFP 184
+ YL+ S I G T N+R+++ + P
Sbjct: 338 RDYLLA-HGLSALQIRATGHGATSLKVELAQCAGSTGAALQTCLAPNRRVDVTLNP 392
>gi|237751947|ref|ZP_04582427.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376514|gb|EEO26605.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 252
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 71/221 (32%), Gaps = 45/221 (20%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI--VNKRFGSSLDKAE------- 51
M+ L +++ M IS + +K++ L + ++ + + +
Sbjct: 19 MMIFLLIAVSYMVVIS------KTQKQLALQNAELKELNRQMSDIAKTHEDLKITLHKDL 72
Query: 52 -DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA-TILN----- 104
EF L+ + + + P + + ++ +F +L +
Sbjct: 73 LAEFSKNLESWNAEIDAD-NTVRFREPEILFDSGKKEVKTRFQEILDDFFPRYIKILTQE 131
Query: 105 --KFPSTVIAIQSHTDSIGTLKNNLLI--------SQERADVIKSYLIQRGVSSN----- 149
K I I+ HT + L SQ RA + Y V
Sbjct: 132 KYKNDIEEIRIEGHTSTEWQNAKTLESRYLGNAELSQARALEVLKYCFSNPVIKADKQWL 191
Query: 150 -RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + G ++ P+ +T ++R+E + + N K
Sbjct: 192 IKVLRANGLSFAKPL---ETAE---LSRRVEFKALTKSNQK 226
>gi|15900665|ref|NP_345269.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae TIGR4]
gi|111658339|ref|ZP_01409027.1| hypothetical protein SpneT_02000479 [Streptococcus pneumoniae
TIGR4]
gi|14972246|gb|AAK74909.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae TIGR4]
Length = 267
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + ++GC R + S+ + + + ++ E L +
Sbjct: 1 MKKLATLLLLSTVALAGCSSVQRSLRGDDYVDSSLAAEESSKVAA---QSAKELNDALTN 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ + + S+ + K P L +A
Sbjct: 58 ENANFPQLSKEVAEDEAEVIFHTSQGDIRIKLFPKLAPLA 97
>gi|29374943|ref|NP_814096.1| putative lipoprotein [Enterococcus faecalis V583]
gi|29342401|gb|AAO80167.1| lipoprotein, putative [Enterococcus faecalis V583]
Length = 176
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 13/119 (10%), Positives = 37/119 (31%), Gaps = 10/119 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MIK G+++ +S C A +K + + I + E+ ++
Sbjct: 4 MIKFAGIALIFAALLSACSNAKNNTQKKAETAAQSSTIEASDSNENEPNTEN-ITQAVKQ 62
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF---------LEKKFLPMLQLIATILNKFPSTV 110
+ ++ + +V + + + ++ + T ++ T
Sbjct: 63 LEEKFNSDEKLVKIDVKNNVKDDTSDNPHAVITVKVINDEAKKNMEEMQTAIDSNSGTE 121
>gi|322514054|ref|ZP_08067125.1| lipoprotein PlpD [Actinobacillus ureae ATCC 25976]
gi|322120071|gb|EFX92042.1| lipoprotein PlpD [Actinobacillus ureae ATCC 25976]
Length = 106
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR 172
+ +TD +G+ K NL +SQ RA+++KS L+Q+GV I+ G+ + D + G+
Sbjct: 1 MAGYTDRLGSEKYNLDLSQRRANMVKSRLVQQGVIVQ--INAVGYGKASQVKACDGESGQ 58
Query: 173 QN------NQRIEI 180
N+R+EI
Sbjct: 59 ALRDCLRPNRRVEI 72
>gi|223983671|ref|ZP_03633847.1| hypothetical protein HOLDEFILI_01128 [Holdemania filiformis DSM
12042]
gi|223964368|gb|EEF68704.1| hypothetical protein HOLDEFILI_01128 [Holdemania filiformis DSM
12042]
Length = 521
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 18/65 (27%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L++ + ++GC + A ++ +
Sbjct: 1 MKKLVALTLASLMLLAGCSSTPKNDGNEATPTPEAAATEADVIVVGAGGAGMTAAIEAVN 60
Query: 61 TGIVV 65
G V
Sbjct: 61 AGKSV 65
>gi|332654952|ref|ZP_08420694.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
gi|332516295|gb|EGJ45903.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
Length = 171
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 17/166 (10%), Positives = 45/166 (27%), Gaps = 17/166 (10%)
Query: 2 IKEL-----GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+K++ L++F +++ CG ++ + G + D ++ +
Sbjct: 1 MKKIKLVGVTLALFCTLSMAACGSTQTGQETQSEP---PAYSQGEMPGGNKDADAEKGKE 57
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQS 115
+L + V + ++ A + ++S
Sbjct: 58 ELPGNLDDIEAEA---ILGGSVAEFQDGSFQVVP-----MEADAETVKSAANGMESTLES 109
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
T S G + + A + + SV +
Sbjct: 110 TTVSYGEDCTFHIANINSATGAVEFEAATSSDVKKSTSVYIYGETQ 155
>gi|84500927|ref|ZP_00999162.1| peptidoglycan-associated protein [Oceanicola batsensis HTCC2597]
gi|84390994|gb|EAQ03412.1| peptidoglycan-associated protein [Oceanicola batsensis HTCC2597]
Length = 153
Score = 42.3 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 57/181 (31%), Gaps = 30/181 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M L++ + + S V + ++ ++ D+
Sbjct: 1 MTFRYALTLLTVFALPAAAQTS---DPVIVKETAPATSARTGPEAAQDE----------- 46
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G+ V L ++ L A + V+ + + D++
Sbjct: 47 -GLQV--------------YFPSGVSSLSQQAAAKLDRAARLYRDGNPIVMIVSGNADTV 91
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
G+ NL +S RA + S L+ RG+ +R + V G + V N+ + I
Sbjct: 92 GSAAANLDLSLRRARTVASGLVSRGIPIDR-LQVVGRGNSELPVPTENGVANSENRSVSI 150
Query: 181 Q 181
Sbjct: 151 T 151
>gi|269968904|ref|ZP_06182876.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269826484|gb|EEZ80846.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 221
Score = 42.3 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 17/157 (10%), Positives = 53/157 (33%), Gaps = 2/157 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++ + ++ ++ ++GC + + + + + + A+ + +
Sbjct: 15 IMDKFAVASLLVFMLAGCAESPDTMLTTYQYNDLKDNDSDGVINQRDNCADTPKGVVVDS 74
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G + E + L + +L P+ + + T
Sbjct: 75 EGCANWVNDSQTHLI--SFFFAMDEHQVTSSHDMPLSELKALLQSNPNAQVILIGDTSPE 132
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+L+ N ++++R I+ L++ G+ NR +
Sbjct: 133 ASLEYNKALAKKRTAAIRKLLVRNGIQDNRIEEQEFY 169
>gi|307704367|ref|ZP_07641284.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus mitis SK597]
gi|307622127|gb|EFO01147.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus mitis SK597]
Length = 238
Score = 42.3 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 10/107 (9%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L L+ + ++++ C + + S A+ + ++ +
Sbjct: 1 MKKRYLVLTALLASSLAACSQEKAKTEDGAAKTEQTAKADGTVGSKSQGAAQKKAEVVNK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
+ D I + L + + +
Sbjct: 61 GDYYSIQGKYDEIIVANKHYPLSKDYNPGENPTAKAELVKLIKAMQE 107
>gi|88798991|ref|ZP_01114572.1| flagellar motor protein [Reinekea sp. MED297]
gi|88778218|gb|EAR09412.1| flagellar motor protein [Reinekea sp. MED297]
Length = 253
Score = 42.3 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 10/135 (7%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFP 107
+ D + +QD VS I + ++F + + +L +A +L
Sbjct: 115 QLSDAYAQMIQDRLFSVSGNESWIEIQLANSITFSDNSADINDQAEAVLYELAKLLQGN- 173
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
+ + ++ ++ + L S+ A V +QR + +S F+ P D
Sbjct: 174 ALPVRVEGYSGASEVRGWELSSSRAVAVV---EYLQRAGVAGERLSSAAFSSYQPSGEGD 230
Query: 168 TKVGRQNNQRIEIQI 182
G RI+I +
Sbjct: 231 LTPG-----RIQIVV 240
>gi|297180399|gb|ADI16615.1| hypothetical protein [uncultured delta proteobacterium
HF0010_01J10]
Length = 597
Score = 42.3 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 68/187 (36%), Gaps = 24/187 (12%)
Query: 17 GCGLASRE----KKKVFLHKSNDTDIVN--KRFGSSLDKAEDEFQMQLQDTGIVVSR--- 67
GC + ++ + G ++ DE G+ +R
Sbjct: 350 GCADGDEDGLADPDDECPTEAGEAPAFGCPDADGDNVPDYRDECADDAAAEGVDATRSNG 409
Query: 68 ------IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-TVIAIQSHTDSI 120
+G L L +A +L +F T + + +HT+
Sbjct: 410 CAADAWVGMNGVQLARGISFSTGRTTLTSTTRRGLDKVAALLTEFAGLTKVEVAAHTNER 469
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ +N+ +++ RA+ I YL+++GV++ R +S+ G + T+ G+ +R+E
Sbjct: 470 RSEADNVSLTKARAEAIMGYLVEKGVAAER-LSMIGHGSEK------TEDGQAA-RRVEF 521
Query: 181 QIFPRGN 187
I +
Sbjct: 522 NILEKET 528
>gi|309778972|ref|ZP_07673742.1| bacterial outer membrane protein [Ralstonia sp. 5_7_47FAA]
gi|308922319|gb|EFP67946.1| bacterial outer membrane protein [Ralstonia sp. 5_7_47FAA]
Length = 315
Score = 42.3 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 65/174 (37%), Gaps = 11/174 (6%)
Query: 19 GLASREKKKVFLHKSNDTDIVNKRFG--SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
+ +++ + +D +NK + + + I ++ G I
Sbjct: 100 SPSPTVQRQRNIRDESDDAALNKLKQKIAEMVETNPVMSQFKHQLLIDMTTEGLRIQIVD 159
Query: 77 PVH--VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNN----LLIS 130
+ + + ++ +L+ + + LN P+ I++ HTD+ + +S
Sbjct: 160 QQNRPMFANASAEVQPYMRTILRELGSALNDVPN-PISLSGHTDATQYATQHGYSNWELS 218
Query: 131 QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFP 184
+RA+ + L+ G+ + V G P+D + + N+RI I +
Sbjct: 219 ADRANASRRELVAGGMKPEKVSRVVGLEASVPLDKAN--IYNPINRRISIVVLN 270
>gi|169829465|ref|YP_001699623.1| putative phage lipoprotein [Lysinibacillus sphaericus C3-41]
gi|168993953|gb|ACA41493.1| putative phage lipoprotein [Lysinibacillus sphaericus C3-41]
Length = 201
Score = 42.3 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 28/80 (35%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L L +++ + CG + + K + + + + E E + L T
Sbjct: 1 MKKLALLLWVSMLLVACGQSDKNNNSDSNPKESVGKNAEEEVSENNKENETEVEEVLTIT 60
Query: 62 GIVVSRIGDMITCYIPVHVS 81
+ + I +V
Sbjct: 61 KGNALIVDNYAEITINNNVF 80
>gi|517110|dbj|BAA06035.1| outermembrane P6 protein homologue [Haemophilus parainfluenzae]
Length = 91
Score = 42.3 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 33/68 (48%)
Query: 70 DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + + +E +++ +L A LN P++ + ++ +TD GT + N+ +
Sbjct: 8 EDLQQRYNTVYFGFDKFNIEGEYVQILDAHAAYLNATPASKVVVEGNTDERGTPEYNIAL 67
Query: 130 SQERADVI 137
Q RAD +
Sbjct: 68 GQRRADAV 75
>gi|260584762|ref|ZP_05852507.1| extracellular solute-binding protein [Granulicatella elegans ATCC
700633]
gi|260157419|gb|EEW92490.1| extracellular solute-binding protein [Granulicatella elegans ATCC
700633]
Length = 433
Score = 42.3 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 43/157 (27%), Gaps = 18/157 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ + +++ CG S + K +S + D +
Sbjct: 6 LKKSFVVGLAGLSLAACGSKSTDSTKGGSSESKKEFTLYSNKSEIQDALTAYAKEWGDKN 65
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G+ V+ +C I L+ +F P + I+
Sbjct: 66 GVTVNIKTCSGSCKIADQ--------LKTEFTA---------GTAPDVFV-IEGQAGYDL 107
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
N + + D + Q ++V G+
Sbjct: 108 WKDNLQPLKGDWIDKTEFEFKQGNDVYGFPVAVEGYG 144
>gi|116669516|ref|YP_830449.1| Excalibur domain-containing protein [Arthrobacter sp. FB24]
gi|116609625|gb|ABK02349.1| Excalibur domain protein [Arthrobacter sp. FB24]
Length = 232
Score = 42.3 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 29/87 (33%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L L + ++GCG + +D V G +LDKA D+ +
Sbjct: 1 MKKMLTLVVLTGLMLTGCGGQQAASSATAVADVSDAVTVPSVMGMTLDKATDQLENLGLK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ G MI V+
Sbjct: 61 VKADDTADGKMIMSKKNWQVTSQDPAE 87
>gi|266619827|ref|ZP_06112762.1| putative bacterial extracellular solute-binding protein
[Clostridium hathewayi DSM 13479]
gi|288868616|gb|EFD00915.1| putative bacterial extracellular solute-binding protein
[Clostridium hathewayi DSM 13479]
Length = 444
Score = 42.3 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 6/93 (6%)
Query: 1 MIKE--LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE----F 54
M+++ +G+++ + ISGC A++E ++ D E E
Sbjct: 1 MVRKYLVGIALLTVIAISGCSAANKETTAEANTSKAPAAETAADIEAASDVLEIEFWHAL 60
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ Q Q+T V + I + ++
Sbjct: 61 ESQYQETLNRVVGEFNDSHDNIVIKPMYIGNYT 93
>gi|327405464|ref|YP_004346302.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320972|gb|AEA45464.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 463
Score = 42.3 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 43/112 (38%), Gaps = 12/112 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+++ L+ M+ + +N ++ + +TD+ TL N +SQ R D
Sbjct: 26 SSVFFDLNKSELKSGGQMMVDSLVKSMNGT-DFILEVYGYTDTSNTLDYNRKLSQSRIDA 84
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN----QRIEIQIFP 184
+ +YL + + + I + + N +R++I + P
Sbjct: 85 VLAYLKSKQ-IAPKEIRTFNEGEDF------NSSNQSKNAAFQRRVDIYLTP 129
>gi|126046392|gb|ABN73089.1| OmpA [Riemerella anatipestifer]
Length = 387
Score = 42.3 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 52/168 (30%), Gaps = 20/168 (11%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ K ++ + ++ +
Sbjct: 209 GCPWPDTDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGA--------------L 254
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 255 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 314
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKY---PIDTNDTKVGRQNNQRIEIQ 181
+ + ++ + + +G P + K R ++++ ++
Sbjct: 315 VVA-ALEARGVNPSQLKSKGVGSAEATVP-ASASNKE-RMKDRKVVVE 359
>gi|331003781|ref|ZP_08327275.1| hypothetical protein HMPREF0491_02137 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412164|gb|EGG91559.1| hypothetical protein HMPREF0491_02137 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 281
Score = 42.3 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 26/70 (37%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + ++GC A + +T + + +++ +++ F +
Sbjct: 1 MKKMYLLGILAAFVLAGCSSAKPAESSSADTSKAETTVAGETTTAAVTDSKNTFTVGFDQ 60
Query: 61 TGIVVSRIGD 70
+ +GD
Sbjct: 61 DFPPMGFVGD 70
>gi|319901547|ref|YP_004161275.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
gi|319416578|gb|ADV43689.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
Length = 418
Score = 42.3 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 60/176 (34%), Gaps = 21/176 (11%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPV- 78
A K KSN V + +E + + +V + + V
Sbjct: 249 SAPTLKMGFKFGKSNKGAKVGGGCSEECLRQLNELRELVSKPNVVYKTDTVYVKQNVAVA 308
Query: 79 ---------HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS-IGTLKNNLL 128
+ + + +A L ++P T + + + + G+ + NL
Sbjct: 309 KSIPGLKSFVAFGNGQASVASTQEMNVLAVADYLKQYPETEVVVTGYASTGTGSRELNLR 368
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGF--AYKYPIDTNDTKVGRQNNQRIEIQI 182
++++RA+ + L + S+ ++V+ P T+D N R+ I +
Sbjct: 369 LARQRAEAVAKTLTDKYGISSDRLTVKSMQDGE-QPFQTSDW------N-RVTIMV 416
>gi|266621836|ref|ZP_06114771.1| putative oligopeptide/dipeptide ABC transporter, peptide-binding
protein [Clostridium hathewayi DSM 13479]
gi|288866469|gb|EFC98767.1| putative oligopeptide/dipeptide ABC transporter, peptide-binding
protein [Clostridium hathewayi DSM 13479]
Length = 543
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 33/100 (33%), Gaps = 6/100 (6%)
Query: 2 IKELGLSMFIMTT---ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ--M 56
+K+L + +T ++ CG S + K+N++++ + A +
Sbjct: 1 MKKLIAVVLAVTMSMSLAACGSKSASETMAGESKANESEVTTSKEAGEESTAAPAAESGE 60
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + D T + +E L L
Sbjct: 61 PVSGGTVNIPITDDPTTLQ-GWMLRNSNESVLAPAIYETL 99
>gi|259907647|ref|YP_002648003.1| Outer membrane protein, OmpA/MotB [Erwinia pyrifoliae Ep1/96]
gi|224963269|emb|CAX54753.1| Outer membrane protein, OmpA/MotB [Erwinia pyrifoliae Ep1/96]
gi|283477490|emb|CAY73406.1| Chemotaxis protein motB (Motility protein B) [Erwinia pyrifoliae
DSM 12163]
Length = 302
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 8/125 (6%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-----KN 125
IT + E +LQ + +L + P+ +++ HTDS+ +
Sbjct: 149 QITDSQERPMFKTGSESPESYMKGILQALVPLLKELPN-SLSLTGHTDSLAYAGGSGGYS 207
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
N +S RA+ + L+ G+ + + V G + + N+RI I + +
Sbjct: 208 NWELSTGRANAARRVLVNAGLGDDHILRVIGTGSRMGLTDIS--ADNPMNRRISILVLSK 265
Query: 186 GNIKK 190
++
Sbjct: 266 LKERQ 270
>gi|319788771|ref|YP_004090086.1| hypothetical protein Rumal_3765 [Ruminococcus albus 7]
gi|315450638|gb|ADU24200.1| hypothetical protein Rumal_3765 [Ruminococcus albus 7]
Length = 195
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 42/152 (27%), Gaps = 22/152 (14%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ L + ++GCG S K + + + V+ + AE E
Sbjct: 1 MKKTALILIAALMLTGCGDTSNVDKIIEEKEKSKETEVSLSPADEVIAAEAEKA------ 54
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM-LQLIATIL------------NKFPS 108
VSR +M+T P E L+ + + L + + K+
Sbjct: 55 ---VSRQQEMLTTSQPPTAFIPDENELKNGDIDLDLTELNANMLYAEVFQITGDPEKYQG 111
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
I + +
Sbjct: 112 KTIRTSGTFNYMMDDGTEYFAVFMADAAACCQ 143
>gi|88799106|ref|ZP_01114686.1| ompA family protein [Reinekea sp. MED297]
gi|88778089|gb|EAR09284.1| ompA family protein [Reinekea sp. MED297]
Length = 1048
Score = 42.3 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 30/79 (37%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
P FL+ L L + +L + + I HTD +G N+ +S+ RA
Sbjct: 284 NFPRVNFDFDSSFLKPTMLNGLVKLERLLKENTDYKVQIVGHTDLVGGNDYNMSLSERRA 343
Query: 135 DVIKSYLIQRGVSSNRFIS 153
+ +Y+ + S
Sbjct: 344 RSVLAYVENDAAYWEKLYS 362
>gi|124266869|ref|YP_001020873.1| hypothetical protein Mpe_A1676 [Methylibium petroleiphilum PM1]
gi|124259644|gb|ABM94638.1| hypothetical protein Mpe_A1676 [Methylibium petroleiphilum PM1]
Length = 217
Score = 42.3 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 39/211 (18%)
Query: 1 MIKELGLSMFI--MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M + L+ F+ + ++ C + K + + ++ +
Sbjct: 1 MRTRIALTPFVPWLFALASCSSPPKPPTVDKSQKRPVNSQMAVELQVCKNDLQNTRLLAT 60
Query: 59 QDTGIVVSRIGDMITCYIPVHV---------------------SFVSEV--FLEKKFLPM 95
+ + + + + + +
Sbjct: 61 ESSRVAETTAATLANLAARQQLLAAMQAPAAQQVKANSVFTVRFDFGSARVAIPPDVTAA 120
Query: 96 LQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
L A S ++ ++ TD I++ERA ++ YL+ GV R +
Sbjct: 121 LVEDAK-----NSPLVLLRGRTDGTTDAPTESRIARERAAAVRDYLVAAGVDPARIRAT- 174
Query: 156 GFAYKYP----IDTNDTKVGRQNNQRIEIQI 182
P + N + GR N+R+EI++
Sbjct: 175 ----YQPAGDHVADNASAGGRGLNRRVEIEL 201
>gi|302039308|ref|YP_003799630.1| hypothetical protein NIDE4036 [Candidatus Nitrospira defluvii]
gi|300607372|emb|CBK43705.1| conserved protein of unknown function [Candidatus Nitrospira
defluvii]
Length = 250
Score = 42.3 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 26/199 (13%), Positives = 57/199 (28%), Gaps = 22/199 (11%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L++ + S E + + K ++ D + + Q +
Sbjct: 25 TSLAVIFILLFSAYVTKVSETESQAKMPVSTPAPERKVARATTDDIKGLLRDHFQRFDLS 84
Query: 65 VSRIGD-----MITCYIPVHVSFVSEVFLEKKFLPMLQL--------IATILNKFPSTVI 111
+ I + + L L + + +++
Sbjct: 85 LDADSSDPHVVRIVVPEALLNFEFGKGALSSAADRFLADAMPTYAALLCGAMRDQIDSLV 144
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQ--------RGVSSNRFISVRGFAYKYPI 163
I+ HTD GT NL +SQER+ + ++ + S G + +
Sbjct: 145 -IEGHTDDRGTDIYNLKLSQERSLNVMVKGLEVIKDSAPWAYRCFHEKTSASGRGRQDLV 203
Query: 164 DTNDTKVGRQNNQRIEIQI 182
R ++R+ +I
Sbjct: 204 MDESRGPDRDKSRRVVFKI 222
>gi|298530257|ref|ZP_07017659.1| Organic solvent tolerance protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509631|gb|EFI33535.1| Organic solvent tolerance protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 758
Score = 42.3 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 21/166 (12%), Positives = 42/166 (25%), Gaps = 9/166 (5%)
Query: 1 MIKELGLSMFI----MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M+ ++ L+ FI M I+GC AS E + D + +
Sbjct: 1 MLYKINLAFFIFLAGMLLIAGCSWASDEPWE-LEADQMYVDQEKNLVEAFGNVLMWRMDD 59
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK----FPSTVIA 112
+Q + + I + F + ++ L + + +
Sbjct: 60 YVQADYARLHTDTNWIYLKGNIQARFEGDHIEGREAELDLDNHVGWIKEGKVFMAQDNVY 119
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
SS ++V G+A
Sbjct: 120 FSGERMEKTGPHTYTYEDGIMTSCDDRPAPWSIKSSRGEVTVEGYA 165
>gi|323692990|ref|ZP_08107211.1| hypothetical protein HMPREF9475_02074 [Clostridium symbiosum
WAL-14673]
gi|323502991|gb|EGB18832.1| hypothetical protein HMPREF9475_02074 [Clostridium symbiosum
WAL-14673]
Length = 354
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Query: 1 MIKELGLSMFIMTT--ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K L +++ + CG +S + L + G + DK +
Sbjct: 1 MKKILSIALTAAMLGCLCACGSSSPAPETKALQAEGTGENAAAADGKNYDKVSLKLSYAT 60
Query: 59 QDTGIV 64
DTG+
Sbjct: 61 GDTGMD 66
>gi|160882396|ref|ZP_02063399.1| hypothetical protein BACOVA_00345 [Bacteroides ovatus ATCC 8483]
gi|156112209|gb|EDO13954.1| hypothetical protein BACOVA_00345 [Bacteroides ovatus ATCC 8483]
Length = 395
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQE 132
+ L + L +A+ + + P+T I + DS GT N +S E
Sbjct: 290 IAPRTVFFKIGSDKLSPQEEMNLSYLASKIKESPNTTYTINGYADSATGTPAFNQKLSLE 349
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFA 158
RA V+K L+++ S + V
Sbjct: 350 RAQVVKDLLVKKYGISADRLKVAAGG 375
>gi|329732157|gb|EGG68511.1| ABC transporter, substrate-binding protein, family 5
[Staphylococcus epidermidis VCU144]
Length = 517
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 16/122 (13%)
Query: 1 MIKELGLSMFIM--TTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAED--- 52
M K + +++ ++GCG +E K V + ++ + + + +++
Sbjct: 1 MKKRVLMTVAASATLLLAGCGNGQKEDKDVTVSLPTEAKADKLDAQVYDAAMPVYSAVYD 60
Query: 53 EFQMQLQDTGIV--------VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
E +D G+ V G + ++ +V F L+ K + A +N
Sbjct: 61 ELVKYDKDKGVKAGLADKWNVDESGKVYEFHLKKNVKFSDGSALDAKAVKFSMDRAKAMN 120
Query: 105 KF 106
K
Sbjct: 121 KD 122
>gi|251796830|ref|YP_003011561.1| hypothetical protein Pjdr2_2823 [Paenibacillus sp. JDR-2]
gi|247544456|gb|ACT01475.1| hypothetical protein Pjdr2_2823 [Paenibacillus sp. JDR-2]
Length = 230
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 12/113 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ L+ I+ +SGCG + E + + D +++ K L
Sbjct: 3 MMKKMILAAAIVALLSGCGSNNGEHAQQVRYSIGDQEVMLKGLQDI----------TLAG 52
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
++ V SF + + P ++ LN+ I I
Sbjct: 53 QQEENGLFKEISVSTSTVSKSFTWSNVINPAYYPAIE--VADLNEDGDNEIII 103
>gi|149174696|ref|ZP_01853321.1| hypothetical protein PM8797T_26210 [Planctomyces maris DSM 8797]
gi|148846390|gb|EDL60728.1| hypothetical protein PM8797T_26210 [Planctomyces maris DSM 8797]
Length = 460
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 36/106 (33%), Gaps = 4/106 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASR---EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M + LS+ + ++GC AS + +K +D +++ E
Sbjct: 20 MKTRVFLSLAGLCLLTGCPSASTPPADPEKAATSAKSDPAPEAATQKPAVEPDSPEAVKA 79
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK-KFLPMLQLIATI 102
+D + D + + + + L+ LP L+ +
Sbjct: 80 FKDLDAKLGMSDDGRVLILDLKGTNAQDADLKHLAGLPSLERLILW 125
>gi|77360167|ref|YP_339742.1| hypothetical protein PSHAa1224 [Pseudoalteromonas haloplanktis
TAC125]
gi|76875078|emb|CAI86299.1| conserved protein of unknown function [Pseudoalteromonas
haloplanktis TAC125]
Length = 265
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 35/94 (37%), Gaps = 10/94 (10%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L +++ ++GC + + ++ L+ + + + K ++ + T
Sbjct: 1 MKKLVIAILATAVLAGCKTSPTGRTQIALYSDQQMSEMGTASFAEMKK--NQPINKNPQT 58
Query: 62 GIVVSRIGDMITCYIP--------VHVSFVSEVF 87
V+ I + + +P V F +
Sbjct: 59 NAYVNCIAEQVVAVLPKQYASQKWEVVVFEDDSA 92
>gi|332969948|gb|EGK08948.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Kingella kingae ATCC 23330]
Length = 386
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 19/48 (39%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK 49
+K+ LS ++ T++ CG + + + + + L +
Sbjct: 1 MKKTLLSTLVLMTLAACGGQDKTAQTPATPTAGSSVASGATVTTDLPQ 48
>gi|284050116|ref|ZP_06380326.1| hypothetical protein AplaP_01445 [Arthrospira platensis str.
Paraca]
Length = 179
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L + L ++ I L+++P + I HTD G N ++ RA
Sbjct: 65 NRIYFNSGSAQLNPQDLQIITKIQEFLDRYPQLSLRIIGHTDLRGNAARNQQLALNRAIA 124
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYP 162
++ L ++G+ R V P
Sbjct: 125 VRDALTKQGIDPKRLEVV---GNSQP 147
>gi|251790651|ref|YP_003005372.1| hypothetical protein Dd1591_3071 [Dickeya zeae Ech1591]
gi|247539272|gb|ACT07893.1| Uncharacterized lipoprotein [Dickeya zeae Ech1591]
Length = 192
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ L +F ++GC S D S++ A+ L
Sbjct: 1 MLKKFILPLFAALVLAGCASKSNTLDVTPKIALPSQDPTLMGVTISINGADQRADQSLA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G ++T + F
Sbjct: 60 ---RVNRDGQLVTLTPSRDLRF 78
>gi|308176310|ref|YP_003915716.1| secreted peptidase [Arthrobacter arilaitensis Re117]
gi|307743773|emb|CBT74745.1| putative secreted peptidase [Arthrobacter arilaitensis Re117]
Length = 505
Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 21/178 (11%), Positives = 44/178 (24%), Gaps = 22/178 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M++ + + ++GC ++ + + S + G E + +L
Sbjct: 1 MMRLAAVGTALAMGLAGCSSSTADSQPEDAQSSQPAAKSSAPEG-----LESFYTQELDW 55
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
I + + + +A I +
Sbjct: 56 EMCGSIIECATIKVPMDYA---------NPEGQSI--DLALNRRAVDGATGNILVNPGGP 104
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND---TKVGRQNN 175
G +++ S + V RG P+ T GRQ N
Sbjct: 105 GGSGLDMVSSTVPSMFSNDLQRAYNVIG---FDPRGVGESSPVTCQSAAETDKGRQEN 159
>gi|253315747|ref|ZP_04838960.1| hypothetical protein SauraC_06308 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
Length = 126
Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 1/92 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ L + +SGC E KK ++N + FQ +
Sbjct: 1 MLKKAKLILIAALVLSGCSTIENESKKDRNTETNTETKSVPEEMEASKYVGQGFQPPAEK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
I ++ F+ L+ K
Sbjct: 61 DAIEFAKK-HKDKIAKRGEQFFMDNFGLKVKA 91
>gi|218129937|ref|ZP_03458741.1| hypothetical protein BACEGG_01520 [Bacteroides eggerthii DSM
20697]
gi|217988047|gb|EEC54372.1| hypothetical protein BACEGG_01520 [Bacteroides eggerthii DSM
20697]
Length = 457
Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L L + + C E + + + T + K+E +
Sbjct: 1 MMKKLFLGFLVAIALGACSSEENEP-EGAIVLTGGTQTSQTIYADETQKSEGIKFTATEP 59
Query: 61 TGIVVSRI 68
V+
Sbjct: 60 WTATVTET 67
>gi|330448471|ref|ZP_08312119.1| inhibitor of vertebrate lysozyme family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328492662|dbj|GAA06616.1| inhibitor of vertebrate lysozyme family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 148
Score = 41.9 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L L+ ++ ++GC + E ++ + T V + + + +
Sbjct: 1 MKKLLLATSVVLLLAGCNDKAPEAQQQKQAEPAATQTVAAEKTQATEAQ--KLPEWISGD 58
Query: 62 GIV 64
+
Sbjct: 59 KVT 61
>gi|255692006|ref|ZP_05415681.1| outer membrane porin F [Bacteroides finegoldii DSM 17565]
gi|260622419|gb|EEX45290.1| outer membrane porin F [Bacteroides finegoldii DSM 17565]
Length = 380
Score = 41.9 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 44/112 (39%), Gaps = 2/112 (1%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ + + V+ + + + V V + + + K+ ++ +A + + P
Sbjct: 250 ESLKRDLVEARNKKPEVIVKKEAGLVPRL-VVVFNIGKSNISKREYMNIEAMAKGIKENP 308
Query: 108 STVIAIQSHTD-SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
V I + D G+ + N+ +S++RA+ ++ ++ + V
Sbjct: 309 GKVFTITGYADKGTGSAEYNMKLSKKRAEAVRDLMVNEFGVPASQLKVDYKG 360
>gi|171057549|ref|YP_001789898.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170774994|gb|ACB33133.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 230
Score = 41.9 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 16/129 (12%)
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLE--KKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ + + + I + F L+ + P ++ ++ T
Sbjct: 96 ASPTSIREVMQPLANSIYTVQFDYGSSRVNLAPTF---LRAVLDQARTAP--LVVLRGRT 150
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP----IDTNDTKVGRQ 173
D + I++ERA +KS+L+ G+ NR + P N T G+
Sbjct: 151 DGTQDVAAEGRIARERAQAVKSHLVAAGLDPNRIRTTW-----QPTGDHAADNGTPDGQA 205
Query: 174 NNQRIEIQI 182
N+R+EI++
Sbjct: 206 RNRRVEIEV 214
>gi|304317425|ref|YP_003852570.1| beta-lactamase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302778927|gb|ADL69486.1| beta-lactamase domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 317
Score = 41.9 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 36/133 (27%), Gaps = 13/133 (9%)
Query: 1 MIKELGLSMF---IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ + ++ +I+GC + + + + D ++ +
Sbjct: 1 MLKKFFIVFLIFTLLFSIAGCSSTNNQGTNITAPAGSAADSNLSESQNTASANKAGLLKV 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML-QLIATILNKFPSTVIAIQSH 116
+ GD I P E L +P + + L I I
Sbjct: 61 ----HFIDVGQGDSIFIQSPT-----GETMLIDAGVPQMGNKVVNYLKNLGVKKIDILVG 111
Query: 117 TDSIGTLKNNLLI 129
T +
Sbjct: 112 THPHEDHIGGMDY 124
>gi|94263332|ref|ZP_01287147.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93456287|gb|EAT06417.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 272
Score = 41.9 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 55/180 (30%), Gaps = 37/180 (20%)
Query: 41 KRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--SFVSEVFLEKKFLPMLQL 98
G D ++ +L+ G+ V + ++ + L ++ L L
Sbjct: 74 TNIGHVRDSLLEDIGSKLRQLGVQVETDLEHGIVHLTEQAINFPSGQAILPEEELAKLAK 133
Query: 99 IAT---------------ILNKFPST-----VIAIQSHTDSIG------TLKNNLLISQE 132
+ LN P + I+ HTD++ ++N +S +
Sbjct: 134 VGDVLVDTLPCYTADPPAYLNCSPEHAGKLESVFIEGHTDNVPLRDGSRKFQDNWDLSAQ 193
Query: 133 RADVIKSYLIQRGVS---------SNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA ++ SV G+ P + + N+RI+++
Sbjct: 194 RAIFAYRSMVIGEQPLLGQLTNTAGFPIFSVSGYGEGRPRNRYEAPTADAANRRIDLRFI 253
>gi|186682294|ref|YP_001865490.1| OmpA/MotB domain-containing protein [Nostoc punctiforme PCC 73102]
gi|186464746|gb|ACC80547.1| OmpA/MotB domain protein [Nostoc punctiforme PCC 73102]
Length = 594
Score = 41.9 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 13/123 (10%)
Query: 71 MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF--------PSTVIAIQSHTDSIGT 122
I + L + L + + K + I I HT+S GT
Sbjct: 469 KIKIEKEIFFFTEGTTELMPGEIDKLPNLFLSIRKCLNIAKYLGKNVQIQIIGHTNSTGT 528
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRF--ISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
+ N +SQ RA+ I SYLI +G+ N+F ++V P T ++ N+R+
Sbjct: 529 ERRNRPLSQARANKILSYLISQGIKINQFQALTVSSSLTSQP---ELTSESKEFNRRVSF 585
Query: 181 QIF 183
++
Sbjct: 586 KVL 588
>gi|29346911|ref|NP_810414.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338809|gb|AAO76608.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
VPI-5482]
Length = 363
Score = 41.9 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 45/139 (32%), Gaps = 13/139 (9%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNK 105
+ E Q + +V P ++ ++ + + L K
Sbjct: 231 EPEPVVTEQPKPAPVVEQPQPKKEVVIEPLKQNIFFAINSAKIQDDQQAKIASLVEYLEK 290
Query: 106 FPSTVIAIQSHTD-SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK-YPI 163
+ +++ + D G + N +S++RA+ + ++ + I+V P
Sbjct: 291 NATAKVSVTGYADKGTGNARINSKLSEKRANNVVE-ALKAKGIAADRITVAYKGDTVQP- 348
Query: 164 DTNDTKVGRQNNQRIEIQI 182
N + R+ I I
Sbjct: 349 -YNTPEEN-----RVSICI 361
>gi|304440155|ref|ZP_07400046.1| possible lipoprotein [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371418|gb|EFM25033.1| possible lipoprotein [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 208
Score = 41.9 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI-VNKRFGSSLDKAEDEFQMQLQD 60
+K+L L++ + ++GC K + + + T+ N++ S D++ + + +D
Sbjct: 1 MKKLILALAFVFLLTGCQSGQNAKTEDKKNGNVATEQNNNEKENSKTDESNKDDSSEAKD 60
Query: 61 TGIVVSRI 68
+
Sbjct: 61 NKADATIT 68
>gi|254486102|ref|ZP_05099307.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214042971|gb|EEB83609.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 66
Score = 41.9 bits (97), Expect = 0.039, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 26/54 (48%)
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+N + Q RA + Y+I + ++ +GF +P+ D++ R +N+
Sbjct: 4 FADNWKLIQARALSVVKYMINFLGIAPDRLAAKGFGRYHPVPEGDSESARAHNR 57
>gi|167765428|ref|ZP_02437541.1| hypothetical protein BACSTE_03818 [Bacteroides stercoris ATCC
43183]
gi|167697056|gb|EDS13635.1| hypothetical protein BACSTE_03818 [Bacteroides stercoris ATCC
43183]
Length = 396
Score = 41.9 bits (97), Expect = 0.039, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 37/123 (30%), Gaps = 3/123 (2%)
Query: 37 DIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ ++ V I + + + + +
Sbjct: 256 AEMAAANQQLESALTAAQNKPMEVAETEVVVTDPNIAPR--TVFFKIGSAEVSPREVMNI 313
Query: 97 QLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+A + +FP+T + + DS GT + N +S +RA + L++ + +
Sbjct: 314 SYLAKQMQEFPNTTYTVNGYADSATGTPEFNKELSLKRAQAVVDVLVKDYGIPANRLKIS 373
Query: 156 GFA 158
Sbjct: 374 ADG 376
>gi|42522620|ref|NP_968000.1| hypothetical protein Bd1065 [Bdellovibrio bacteriovorus HD100]
gi|39575152|emb|CAE78993.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 170
Score = 41.9 bits (97), Expect = 0.039, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 29/72 (40%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + L+ ++ + GC + ++ + + V KR + + + + LQ+
Sbjct: 1 MKTIWLAGLVIAALVGCSSKDKLDTELEDAQLMGRETVGKRDDNYVIQEKKNLVQHLQEV 60
Query: 62 GIVVSRIGDMIT 73
V + + I
Sbjct: 61 QTDVYTMEENIY 72
>gi|298386442|ref|ZP_06995998.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
gi|298260819|gb|EFI03687.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
Length = 363
Score = 41.9 bits (97), Expect = 0.039, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 45/139 (32%), Gaps = 13/139 (9%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIP---VHVSFVSEVFLEKKFLPMLQLIATILNK 105
+ E Q + T + P ++ ++ + + L K
Sbjct: 231 EPEPVVTEQPKPTPVAEKPQPKKEVVIEPMKQNIFFAINSAKIQDDQQAKIASLVEYLEK 290
Query: 106 FPSTVIAIQSHTD-SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK-YPI 163
+ +++ + D G + N +S++RA+ + ++ + I+V P
Sbjct: 291 NATAKVSVTGYADKGTGNARINSKLSEKRANNVVE-ALKAKGIAADRITVAYKGDTVQP- 348
Query: 164 DTNDTKVGRQNNQRIEIQI 182
N + R+ I I
Sbjct: 349 -YNTPEEN-----RVSICI 361
>gi|330752332|emb|CBL87286.1| protein with similarity to outer membrane OmpA family protein
[uncultured Flavobacteria bacterium]
Length = 292
Score = 41.9 bits (97), Expect = 0.039, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 44/126 (34%), Gaps = 4/126 (3%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ ++ + + + + K + L+ + L + ++ H +
Sbjct: 166 DSLSINEVEVGMVYQLKEIFFIPATAQYLPKSIKELERLKQFLLNHEVLKVQVRGHVNGP 225
Query: 121 GT--LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-DTKVGRQNNQR 177
+ +S RA IK +L+ GV R +G + ++ T N+R
Sbjct: 226 AQTKPEFYQELSDARAKAIKQFLVGNGVGEERVDE-KGMSNFQMRYSSPKTAFEAGENRR 284
Query: 178 IEIQIF 183
+EI I
Sbjct: 285 VEIIIT 290
>gi|317476843|ref|ZP_07936086.1| hypothetical protein HMPREF1016_03070 [Bacteroides eggerthii
1_2_48FAA]
gi|316907018|gb|EFV28729.1| hypothetical protein HMPREF1016_03070 [Bacteroides eggerthii
1_2_48FAA]
Length = 457
Score = 41.9 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L L + + C E + + + T + K+E +
Sbjct: 1 MMKKLFLGFLVAIALGACSSEESEP-EGAIVLTGGTQTSQTIYADETQKSEGIKFTATEP 59
Query: 61 TGIVVSRI 68
V+
Sbjct: 60 WTATVTET 67
>gi|268608422|ref|ZP_06142149.1| hypothetical protein RflaF_02855 [Ruminococcus flavefaciens FD-1]
Length = 110
Score = 41.9 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + LS +M+ ++GCG + + V + + + A D
Sbjct: 4 MKRFALLSAALMSFLTGCGTQQENTANSQPKAAASSGTVKEIAQTGMSTAVP------DD 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ + G + ++K
Sbjct: 58 YLQPIEQAGTVTQITYDSKDFVRDGSDIKK 87
>gi|257865388|ref|ZP_05645041.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC30]
gi|257871719|ref|ZP_05651372.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC10]
gi|257799322|gb|EEV28374.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC30]
gi|257805883|gb|EEV34705.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC10]
Length = 547
Score = 41.9 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 11/81 (13%)
Query: 1 MIKE-LGLSMFIMTTISGCGLAS------REKKKVFLHKSNDTDIVNK----RFGSSLDK 49
M K+ +G++ F + +S C S +++++ + + G D
Sbjct: 1 MKKKMIGITAFTVLVLSACSTTSPTTDSGQQEEQGAVAQEIQVSTAGALSTLDSGQYTDV 60
Query: 50 AEDEFQMQLQDTGIVVSRIGD 70
+ Q+ + + + GD
Sbjct: 61 NSSDMIGQVAEGLYRLDQEGD 81
>gi|145296863|ref|YP_001139684.1| hypothetical protein cgR_2763 [Corynebacterium glutamicum R]
gi|140846783|dbj|BAF55782.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 166
Score = 41.9 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/157 (11%), Positives = 41/157 (26%), Gaps = 14/157 (8%)
Query: 2 IKELGLSMFIMTT---ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K + ++ ++ CG + E + T+ ++ Q
Sbjct: 1 MKRIYATLASGLLCLSLAACGGVTVEGDDSPSTAAAPTESSAGSSSTARSTERSSQASQS 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+G +R G V+ + L + I I D
Sbjct: 61 NGSGGSTARDGAAEEIDGLPEVTVERSA----EAQAFLDAL-------KDEKIDISGVED 109
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ N S+ + + + + SV+
Sbjct: 110 QLIATAQNYCSSENKDQNVTVDAVAGQLIVQGRTSVK 146
>gi|257874982|ref|ZP_05654635.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
gi|257809148|gb|EEV37968.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
Length = 547
Score = 41.9 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 11/81 (13%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHK----------SNDTDIVNKRFGSSLDK 49
M K+ +G++ F + +S C S + S + G D
Sbjct: 1 MKKKMIGITAFTVLVLSACSTTSPTTDSGQQEEQGAIAQEIQVSTAGALSTLDSGQYTDV 60
Query: 50 AEDEFQMQLQDTGIVVSRIGD 70
+ Q+ + + + GD
Sbjct: 61 NSSDMIGQVAEGLYRLDQEGD 81
>gi|70725148|ref|YP_252062.1| hypothetical protein SH0147 [Staphylococcus haemolyticus JCSC1435]
gi|68445872|dbj|BAE03456.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 517
Score = 41.9 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 43/122 (35%), Gaps = 16/122 (13%)
Query: 1 MIKE--LGLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAED--- 52
M K + ++ ++GCG +E K + + ++ + + + +++
Sbjct: 1 MKKRVLITMAASATLLLAGCGNDQKEDKNITVSLPTEAKADKLDAQGYDAAMPVYSAVYD 60
Query: 53 EFQMQLQDTGIV--------VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+D G+ V G + ++ +V F L+ K + A +N
Sbjct: 61 ALVKYDKDKGVKAGLAEKWHVDESGKVYEFHLKKNVKFSDGSALDAKAVKFSIERAKAMN 120
Query: 105 KF 106
K
Sbjct: 121 KD 122
>gi|294012218|ref|YP_003545678.1| OmpA-family protein [Sphingobium japonicum UT26S]
gi|292675548|dbj|BAI97066.1| OmpA-family protein [Sphingobium japonicum UT26S]
Length = 236
Score = 41.9 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ + + + T + +TD+ G+ + N +S RA + S L+ +G S
Sbjct: 142 PEGAGTISTLTQTAAQCGWTRFGVTGYTDTSGSNRYNDGLSLRRARNVAS-LMSQGGVSA 200
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
I+V G V N+R+EI
Sbjct: 201 DAITVTGLGETQLKIETADGVREPMNRRVEIT 232
>gi|163814503|ref|ZP_02205892.1| hypothetical protein COPEUT_00654 [Coprococcus eutactus ATCC 27759]
gi|158450138|gb|EDP27133.1| hypothetical protein COPEUT_00654 [Coprococcus eutactus ATCC 27759]
Length = 481
Score = 41.9 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 13/134 (9%), Positives = 39/134 (29%), Gaps = 5/134 (3%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ ++ + +++GCG + + K T+ A+ E D +
Sbjct: 9 IAMAGLMAASLAGCGGSDSDNKDTAEATKATTEAAGSDSADDT-TADAEGIKSYADIQLG 67
Query: 65 VSRIGDMITCYIPVHVSFVSEVFL-EKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ + + K + L+ ++P+ + + + T+
Sbjct: 68 TDFTDLSAEIKFYNNRTDMDSDDYGGKNWKQYLEDFN---KEYPNIKVDVITDTNYAEDA 124
Query: 124 KNNLLISQERADVI 137
+L +
Sbjct: 125 LTHLQSGNYETVMC 138
>gi|148267971|ref|YP_001246914.1| hypothetical protein SaurJH9_1544 [Staphylococcus aureus subsp.
aureus JH9]
gi|150394036|ref|YP_001316711.1| hypothetical protein SaurJH1_1575 [Staphylococcus aureus subsp.
aureus JH1]
gi|297244661|ref|ZP_06928544.1| hypothetical protein SLAG_00746 [Staphylococcus aureus A8796]
gi|147741040|gb|ABQ49338.1| protein of unknown function DUF1672 [Staphylococcus aureus subsp.
aureus JH9]
gi|149946488|gb|ABR52424.1| protein of unknown function DUF1672 [Staphylococcus aureus subsp.
aureus JH1]
gi|297178691|gb|EFH37937.1| hypothetical protein SLAG_00746 [Staphylococcus aureus A8796]
Length = 298
Score = 41.9 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 25/92 (27%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L + +SGC + E + + AE + +
Sbjct: 1 MFKRIKLILIATIILSGCSTTNNESNNETKSVPEEMEASKYVGQDFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
++G+ F L+ K
Sbjct: 61 HRKEFEKVGEQ---------FFKDNFGLKVKA 83
>gi|330684649|gb|EGG96353.1| ABC transporter, substrate-binding protein, family 5
[Staphylococcus epidermidis VCU121]
Length = 516
Score = 41.9 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 15/120 (12%)
Query: 1 MIKELGLSMFIM-TTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAED---E 53
M K + LS+ ++GC +++ + + ++ + + + +++
Sbjct: 1 MKKRILLSVATTTLLLAGCSSHTKDDHNINVSLPTEAKADKLDAQGYDAAMPVYSAVYDS 60
Query: 54 FQMQLQDTGI--------VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
+ GI V G ++ +V F L+ K + A +NK
Sbjct: 61 LVQYDKKKGIKAGLADRWKVDNAGKEYEFHLKDNVKFSDGSKLDAKAVKFSIERAKKMNK 120
>gi|319652307|ref|ZP_08006424.1| phosphonate ABC transporter phosphate-binding protein [Bacillus
sp. 2_A_57_CT2]
gi|317395968|gb|EFV76689.1| phosphonate ABC transporter phosphate-binding protein [Bacillus
sp. 2_A_57_CT2]
Length = 344
Score = 41.9 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 29/95 (30%), Gaps = 4/95 (4%)
Query: 2 IKELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K++ L + M +GC + +K L + + G + D+ + +
Sbjct: 1 MKKMALFLLSMAMTVVFAGCSFTANSEKDDTLTIAWLPNESGADLGEARDEI-GKLIEEK 59
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ D I + FL +
Sbjct: 60 TGKKVEHQTTTDYIVAIEAIANGNADMAFLGAQGY 94
>gi|111020473|ref|YP_703445.1| hypothetical protein RHA1_ro03484 [Rhodococcus jostii RHA1]
gi|110820003|gb|ABG95287.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 689
Score = 41.9 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 55/193 (28%), Gaps = 17/193 (8%)
Query: 1 MIKELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M++ G+++ + + + C S S+ + F + ED +
Sbjct: 57 MLRGTGMAVLAVGAGSALVACSDDSGNGSVSGSDGSDGSAPAGTNFDAVAPNTEDALVVP 116
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL--NKFPSTVIAIQS 115
VV R GD + P + + A +L P+T + + +
Sbjct: 117 DGYEQAVVIRWGDPVLPGAPAFDFDNQTAQAQAQQFGFNNDFAGLLPVEGQPNTFLLVVN 176
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND-TKVGRQN 174
H + ++ + + S V+ + T
Sbjct: 177 HEYTTEPFMFTGYDAENPSPEQFQTALAAHGLS----VVQVKGES---ASGALTPEFGPY 229
Query: 175 NQRI----EIQIF 183
N+RI E +
Sbjct: 230 NRRITATTEFVVT 242
>gi|317491982|ref|ZP_07950415.1| hypothetical protein HMPREF0864_01179 [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316920007|gb|EFV41333.1| hypothetical protein HMPREF0864_01179 [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 87
Score = 41.9 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 22/71 (30%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MI +LGL + +S C ++ +L QL
Sbjct: 1 MIAKLGLVLAAGILLSACSSEPEQQATSANVHQRIDMSDAAVENCALAGGTLALSSQLDG 60
Query: 61 TGIVVSRIGDM 71
+ + + ++ D
Sbjct: 61 SSVGMCQLPDG 71
>gi|300715588|ref|YP_003740391.1| lipoprotein [Erwinia billingiae Eb661]
gi|299061424|emb|CAX58536.1| Putative lipoprotein [Erwinia billingiae Eb661]
Length = 192
Score = 41.9 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 4/92 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC S + D S++ A+ L
Sbjct: 1 MLKKLLFPLLAVLILAGCASNSNTLTVSPKIQLPQQDPSLTGITVSINGADQRSDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
V+R G ++T + F+ + LEK+
Sbjct: 60 ---KVNRDGQLVTLTPSRDLRFLLQETLEKQM 88
>gi|291570403|dbj|BAI92675.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 204
Score = 41.9 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
L + L ++ I L+++P + I HTD G N ++ RA
Sbjct: 90 NRIYFNSGSAQLNPQDLQIITKIQEFLDRYPQLSLRIIGHTDLRGNAARNQQLALNRAIA 149
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKYP 162
++ L ++G+ R V P
Sbjct: 150 VRDALTKQGIDPKRLEVV---GNSQP 172
>gi|169827049|ref|YP_001697207.1| oligopeptide-binding protein oppA [Lysinibacillus sphaericus
C3-41]
gi|168991537|gb|ACA39077.1| Oligopeptide-binding protein oppA precursor [Lysinibacillus
sphaericus C3-41]
Length = 607
Score = 41.9 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 11/97 (11%), Positives = 28/97 (28%), Gaps = 3/97 (3%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L + M ++ C +K + + ++ G S ++ M+
Sbjct: 1 MKKNWLFLSILFAFMLVLAACSGGGNGSEKGAETDNKEKSGETEKSGESEGTSDSLLPME 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
+ + G + + + L +
Sbjct: 61 VTNEGDAIQGGTLRVGLVTSSPFQGIFNWELYEDAYD 97
>gi|57650444|ref|YP_186373.1| hypothetical protein SACOL1531 [Staphylococcus aureus subsp.
aureus COL]
gi|87162187|ref|YP_494076.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195226|ref|YP_500028.1| hypothetical protein SAOUHSC_01512 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221608|ref|YP_001332430.1| hypothetical protein NWMN_1396 [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161509658|ref|YP_001575317.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|221142049|ref|ZP_03566542.1| lipoprotein [Staphylococcus aureus subsp. aureus str. JKD6009]
gi|258451146|ref|ZP_05699181.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|282921736|ref|ZP_06329453.1| lipoprotein [Staphylococcus aureus A9765]
gi|284024486|ref|ZP_06378884.1| putative lipoprotein [Staphylococcus aureus subsp. aureus 132]
gi|294848453|ref|ZP_06789199.1| lipoprotein [Staphylococcus aureus A9754]
gi|304380927|ref|ZP_07363586.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|57284630|gb|AAW36724.1| lipoprotein, putative [Staphylococcus aureus subsp. aureus COL]
gi|87128161|gb|ABD22675.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202784|gb|ABD30594.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374408|dbj|BAF67668.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160368467|gb|ABX29438.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|257861201|gb|EEV84014.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|269940980|emb|CBI49364.1| putative lipoprotein [Staphylococcus aureus subsp. aureus TW20]
gi|282593998|gb|EFB98987.1| lipoprotein [Staphylococcus aureus A9765]
gi|294824479|gb|EFG40902.1| lipoprotein [Staphylococcus aureus A9754]
gi|302751320|gb|ADL65497.1| putative lipoprotein [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304340513|gb|EFM06448.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|315197760|gb|EFU28094.1| lipoprotein [Staphylococcus aureus subsp. aureus CGS01]
gi|320142733|gb|EFW34536.1| hypothetical protein HMPREF9529_01833 [Staphylococcus aureus
subsp. aureus MRSA177]
gi|329314166|gb|AEB88579.1| Lipoprotein [Staphylococcus aureus subsp. aureus T0131]
gi|329723184|gb|EGG59715.1| putative lipoprotein [Staphylococcus aureus subsp. aureus 21189]
Length = 305
Score = 41.9 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 27/92 (29%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E K + + AE + +
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDVVEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|311294119|gb|ADP88815.1| outer membrane protein [Vibrio parahaemolyticus]
gi|311294123|gb|ADP88817.1| outer membrane protein [Vibrio parahaemolyticus]
gi|311294125|gb|ADP88818.1| outer membrane protein [Vibrio parahaemolyticus]
gi|311294127|gb|ADP88819.1| outer membrane protein [Vibrio parahaemolyticus]
gi|311294131|gb|ADP88821.1| outer membrane protein [Vibrio parahaemolyticus]
gi|311294133|gb|ADP88822.1| outer membrane protein [Vibrio parahaemolyticus]
Length = 182
Score = 41.9 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 65/184 (35%), Gaps = 10/184 (5%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV------NKRFGSSLDKAEDEFQMQL 58
+ ++ C S + KS+DT I L +DE ++
Sbjct: 3 FAIIFTSNVALANCINQSENYVTSKVLKSSDTKITQVDGKLASVINEDLSIVQDEKIEKV 62
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ T S D + + V +E +L + ++N+ I ++ HTD
Sbjct: 63 EATNATESCTFDKNSMSL-VLHYDTNEHYLTNVHKQAISKYLELVNE--DKRILVEGHTD 119
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+G+ N +S RA YL + NR + + F PI + N+R+
Sbjct: 120 DVGSQAYNKSLSLRRASTASKYLKKDLGLGNRIVE-KAFGESAPICKVNENKLSGCNRRV 178
Query: 179 EIQI 182
+ I
Sbjct: 179 VLTI 182
>gi|317129656|ref|YP_004095938.1| hypothetical protein Bcell_2956 [Bacillus cellulosilyticus DSM
2522]
gi|315474604|gb|ADU31207.1| hypothetical protein Bcell_2956 [Bacillus cellulosilyticus DSM
2522]
Length = 184
Score = 41.9 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 8/55 (14%), Positives = 23/55 (41%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+K+ + + +++ I+ CG E+ + + + + +DK E +
Sbjct: 1 MKKFVIMVCMLSFITACGTGEGEESTESVPVTGQGEQHTDSENNDIDKEEKQGDQ 55
>gi|326560563|gb|EGE10944.1| hypothetical protein E9K_09484 [Moraxella catarrhalis 103P14B1]
gi|326561436|gb|EGE11786.1| hypothetical protein E9M_06283 [Moraxella catarrhalis 46P47B1]
gi|326565609|gb|EGE15772.1| hypothetical protein E9O_03254 [Moraxella catarrhalis 12P80B1]
gi|326568444|gb|EGE18524.1| hypothetical protein E9S_08729 [Moraxella catarrhalis BC7]
gi|326572334|gb|EGE22329.1| hypothetical protein E9U_01141 [Moraxella catarrhalis BC8]
gi|326573946|gb|EGE23896.1| hypothetical protein EA1_07870 [Moraxella catarrhalis O35E]
gi|326574936|gb|EGE24866.1| hypothetical protein E9Y_04486 [Moraxella catarrhalis 101P30B1]
gi|326576264|gb|EGE26179.1| hypothetical protein E9W_01405 [Moraxella catarrhalis CO72]
Length = 204
Score = 41.9 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 55/179 (30%), Gaps = 27/179 (15%)
Query: 38 IVNKRFGSSLDKAED-------EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
V + D E EF L G + + I+ P + + L+
Sbjct: 14 QVRQIAEEYQDTQEQIYKALLHEFADDLPKWGAKIDKDTLTISFLSPDILFKTGQSDLQD 73
Query: 91 KFLPMLQ----LIATILNKFPST--VIAIQSHTDSIG--------TLKNNLLISQERADV 136
+ +L +++++ + I I+ HT S N+ +SQ+R
Sbjct: 74 NYKEILSDFFPRYIKVIDRYKDSINEIRIEGHTSSEWAAGVDADIAYFENMRLSQDRTRT 133
Query: 137 IKSYLI------QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + Q ++ G + I ++R+ +I + +
Sbjct: 134 VLQFAYAIPEVSQYRPWIKTHLAAVGLSSAKTIKNESGLENAGASKRVTFRILTNADEQ 192
>gi|157364674|ref|YP_001471441.1| OmpA/MotB domain-containing protein [Thermotoga lettingae TMO]
gi|157315278|gb|ABV34377.1| OmpA/MotB domain protein [Thermotoga lettingae TMO]
Length = 289
Score = 41.9 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%), Gaps = 1/86 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
I + + + F L + +L I +I+ + + V+ I + D
Sbjct: 94 GKITIQEKDEGTVIIMQDMAFFYPASAKLTPEAKELLGKIGSIVIEHTTNVLQIYGYADD 153
Query: 120 IGTLKNNLLISQERADVIKSYLIQRG 145
++++ +S ++ + +
Sbjct: 154 QPLSQDSIYVSNWHLSSARASSVVQF 179
>gi|326789204|ref|YP_004307025.1| beta-lactamase [Clostridium lentocellum DSM 5427]
gi|326539968|gb|ADZ81827.1| beta-lactamase domain protein [Clostridium lentocellum DSM 5427]
Length = 288
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 22/91 (24%), Gaps = 3/91 (3%)
Query: 1 MIKELGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K+L + +T ++GC +S + E E L
Sbjct: 1 MKKKLSFILLSLTLCLAGCSNTGSASTPASTPAEATASPEASAPANSEEPIESE--PALV 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ + I + +
Sbjct: 59 LPLVENTSGKVQIQTVSGSSTYPYNSYIITS 89
>gi|322390836|ref|ZP_08064346.1| lipoprotein [Streptococcus parasanguinis ATCC 903]
gi|321142506|gb|EFX37974.1| lipoprotein [Streptococcus parasanguinis ATCC 903]
Length = 186
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 44/136 (32%), Gaps = 10/136 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL--DKAEDEFQMQLQ 59
+K+ L+ + ++ C EK K S T V K ++ E Q
Sbjct: 1 MKKFLLASVCLLALTACSQGQAEKGKASTTSSQSTSQVKKEKEENVRTKTFSTELNDHHQ 60
Query: 60 DTGIVVSRIGDMITCY------IPVHVSFVSEVFLEKKFLPMLQ--LIATILNKFPSTVI 111
+ + + ++++ I + + L++ + L+ I LN P
Sbjct: 61 NKIQIGYKKDEIVSFTFLSFEPISSDLQDMDLSELKEIYQEELEHSDIYKSLNGKPGLSF 120
Query: 112 AIQSHTDSIGTLKNNL 127
IQ D K
Sbjct: 121 RIQISKDKQSYAKVLQ 136
>gi|257092025|ref|YP_003165666.1| membrane-bound proton-translocating pyrophosphatase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044549|gb|ACV33737.1| V-type H(+)-translocating pyrophosphatase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 806
Score = 41.6 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 36/113 (31%), Gaps = 13/113 (11%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
+ L L++I P +AI D G+ N +++
Sbjct: 703 VVPVAKVYFATGSAELPADATKTLEVIVVHAKANPGAKLAISGFHDPSGSQAVNEEVAKN 762
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT---NDTKVGRQNNQRIEIQI 182
RA ++ ++ + I +R P T D +R+E+ +
Sbjct: 763 RAKAVRD-SLKNVGIAEERIELR-----KPEVTTGGGDPAEA----RRVEVSV 805
>gi|332534006|ref|ZP_08409857.1| hypothetical protein PH505_az00240 [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036555|gb|EGI73022.1| hypothetical protein PH505_az00240 [Pseudoalteromonas
haloplanktis ANT/505]
Length = 265
Score = 41.6 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 27/62 (43%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L L++ ++GC + + ++ L+ + + + K++ + ++
Sbjct: 1 MKKLVLAVLATAVLAGCKTSPTGRTQIALYSDQQMSEMGTASFADMKKSQPINKDAKTNS 60
Query: 62 GI 63
+
Sbjct: 61 YV 62
>gi|308051428|ref|YP_003914994.1| lipoprotein [Ferrimonas balearica DSM 9799]
gi|307633618|gb|ADN77920.1| putative lipoprotein [Ferrimonas balearica DSM 9799]
Length = 429
Score = 41.6 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 16/148 (10%), Positives = 38/148 (25%), Gaps = 27/148 (18%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR------------------- 42
+K+L + + TT++ CG +S + ++ +
Sbjct: 1 MKKLIIPTLMATTLAACGSSSSDGSNPLPPQATLPSAIQGALQKVEGSNLYVNGAKIPAS 60
Query: 43 -FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY-----IPVHVSFVSEVFLEKKFLPML 96
+D + + G + VS V++ L ++
Sbjct: 61 TAQVEMDDQRASLGDLKPGMVLDIDTNGFEAVEVDYDALLKGPVSEVTDSSLVVAGQTVM 120
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLK 124
A + + H + G
Sbjct: 121 SAQANQF--HSGDFVEVSGHYQAGGIQA 146
>gi|293395760|ref|ZP_06640042.1| outer membrane protein A [Serratia odorifera DSM 4582]
gi|291421697|gb|EFE94944.1| outer membrane protein A [Serratia odorifera DSM 4582]
Length = 352
Score = 41.6 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 37/117 (31%), Gaps = 12/117 (10%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATI--LNKFPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L + ++ + + + + ++D IG+ N +S RA
Sbjct: 229 SDVMFGYNSAELSPQGQAAVRDLYNRPEIQSAKNQTTMVIGYSDRIGSADYNQQLSSRRA 288
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI--DTNDTKVGRQN-------NQRIEIQI 182
+ LI + +G + D R ++R+ ++I
Sbjct: 289 QAVADELIGL-GMPAANVQAQGRGASESVTGTQCDGISARSQRIDCLAPDRRVVVEI 344
>gi|68499987|gb|AAY97930.1| putative outer membrane protein [Plasmid pMCBF1]
gi|133711739|gb|ABO36559.1| putative outer membrane protein [uncultured bacterium pMCBF6]
Length = 224
Score = 41.6 bits (96), Expect = 0.050, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 34/127 (26%), Gaps = 4/127 (3%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ G +HVSF F P +A L + I S
Sbjct: 96 PAVSAAQPHYQSAGYGHPVSTTLHVSFPDSS---STFQPSPGQVAA-LGDVRDAAMVIIS 151
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
S + S I + + I N T GR N
Sbjct: 152 GRTSTLRPSARDESLALARAASARSWLIARGVSPLKIMINYVSAADFIADNSTPEGRYMN 211
Query: 176 QRIEIQI 182
QR++I++
Sbjct: 212 QRVDIEV 218
>gi|319945287|ref|ZP_08019549.1| OmpA domain protein [Lautropia mirabilis ATCC 51599]
gi|319741857|gb|EFV94282.1| OmpA domain protein [Lautropia mirabilis ATCC 51599]
Length = 477
Score = 41.6 bits (96), Expect = 0.050, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 4/104 (3%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
L LQ + L + + + + + D + N +S+ RA + +
Sbjct: 376 FFKSGSSSLSPAETRRLQQLGACLGR--TAWVRVTGYADPRYSAAYNKTLSERRARAV-A 432
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDT-NDTKVGRQNNQRIEIQI 182
I G S+ I+V G P K Q +R++I +
Sbjct: 433 GAISEGGFSSARITVVGAGKTSPRTKVRADKATLQRARRVDILV 476
>gi|89100226|ref|ZP_01173093.1| possible D-amino acid dehydrogenase, large subunit [Bacillus sp.
NRRL B-14911]
gi|89085076|gb|EAR64210.1| possible D-amino acid dehydrogenase, large subunit [Bacillus sp.
NRRL B-14911]
Length = 463
Score = 41.6 bits (96), Expect = 0.050, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 6/103 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS----LDKAEDEFQMQ 57
IK+L + + I+ C S + K ND + + S + AED +
Sbjct: 5 IKKLTILFLSIFIITACSKESGNNTEQKQSKGNDAAAIGQVDESEDTENAEDAEDAKEQI 64
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE-KKFLPMLQLI 99
+ + I P + ++ + L +
Sbjct: 65 NLAENKKIPASLEEI-ISYPKGPFTAEDTQIKDPEVQQALSKV 106
>gi|296113886|ref|YP_003627824.1| hypothetical protein MCR_1674 [Moraxella catarrhalis RH4]
gi|295921580|gb|ADG61931.1| conserved hypothetical protein [Moraxella catarrhalis RH4]
Length = 228
Score = 41.6 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 55/179 (30%), Gaps = 27/179 (15%)
Query: 38 IVNKRFGSSLDKAED-------EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
V + D E EF L G + + I+ P + + L+
Sbjct: 38 QVRQIAEEYQDTQEQIYKALLHEFADDLPKWGAKIDKDTLTISFLSPDILFKTGQSDLQD 97
Query: 91 KFLPMLQ----LIATILNKFPST--VIAIQSHTDSIG--------TLKNNLLISQERADV 136
+ +L +++++ + I I+ HT S N+ +SQ+R
Sbjct: 98 NYKEILSDFFPRYIKVIDRYKDSINEIRIEGHTSSEWAAGVDADIAYFENMRLSQDRTRT 157
Query: 137 IKSYLI------QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + Q ++ G + I ++R+ +I + +
Sbjct: 158 VLQFAYAIPEVSQYRPWIKTHLAAVGLSSAKTIKNESGLENAGASKRVTFRILTNADEQ 216
>gi|330446197|ref|ZP_08309849.1| cystatin domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328490388|dbj|GAA04346.1| cystatin domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 130
Score = 41.6 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 22/68 (32%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ L + C A E K+ ++ G + K E + ++
Sbjct: 1 MKKKILLIALSSIVLVACSSAKNETKEEANVQTGCDFTQAIAGGWAQGKITPEVEQAAKE 60
Query: 61 TGIVVSRI 68
+S
Sbjct: 61 AVKEISGD 68
>gi|27365389|ref|NP_760917.1| hypothetical protein VV1_2054 [Vibrio vulnificus CMCP6]
gi|37680571|ref|NP_935180.1| hypothetical protein VV2387 [Vibrio vulnificus YJ016]
gi|320155773|ref|YP_004188152.1| hypothetical protein VVM_01820 [Vibrio vulnificus MO6-24/O]
gi|27361536|gb|AAO10444.1| hypothetical protein VV1_2054 [Vibrio vulnificus CMCP6]
gi|37199319|dbj|BAC95151.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
gi|319931085|gb|ADV85949.1| hypothetical protein VVMO6_00927 [Vibrio vulnificus MO6-24/O]
Length = 154
Score = 41.6 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 25/83 (30%), Gaps = 3/83 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ L ++ +SGC ++ + G + + E L+
Sbjct: 1 MKTKIILCSAVLAVLSGCASVPMVDSELSDQAKQFEAPTEGKAGVYVYRPESGIGGALKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFV 83
V G+ I P +
Sbjct: 61 D---VHIDGECIGETAPGVFFYH 80
>gi|332361115|gb|EGJ38919.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sanguinis
SK1056]
Length = 270
Score = 41.6 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 30/98 (30%), Gaps = 6/98 (6%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K +L + + C ++ + K+ + DK +
Sbjct: 11 MKYSKLIFLAASVLVLGACSSGKDTTGDSSDKQAASSTSTVKKQDAEKDK---KSSQDTA 67
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPML 96
+ + + +VS+ + ++ K+ +L
Sbjct: 68 SESTDTKKEQNHEDKTLDQNVSYNGSYYSVKGKYDEIL 105
>gi|320140423|gb|EFW32278.1| conserved domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
Length = 165
Score = 41.6 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 27/92 (29%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E K + + AE + +
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDVVEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|308176861|ref|YP_003916267.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) ABC
transporter substrate-binding protein [Arthrobacter
arilaitensis Re117]
gi|307744324|emb|CBT75296.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) ABC
transporter, substrate-binding protein [Arthrobacter
arilaitensis Re117]
Length = 300
Score = 41.6 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 34/101 (33%), Gaps = 5/101 (4%)
Query: 1 MIKELG----LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF-Q 55
++K++ L + ++GC + S + IV ++ E
Sbjct: 2 ILKKILPATALVLASGLVLAGCSSSDPLAGGSSSGDSGNETIVVGSQAYYSNEIVAEIYA 61
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
L+D G+ V R ++ + + + ++ L
Sbjct: 62 QALEDAGMEVERKFNIGQRDAYMPQLEDGSIDVSPEYTGNL 102
>gi|257433597|ref|ZP_05609955.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257436438|ref|ZP_05612485.1| lipoprotein [Staphylococcus aureus subsp. aureus M876]
gi|282914275|ref|ZP_06322062.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M899]
gi|282924382|ref|ZP_06332056.1| lipoprotein [Staphylococcus aureus subsp. aureus C101]
gi|293510262|ref|ZP_06668970.1| lipoprotein [Staphylococcus aureus subsp. aureus M809]
gi|293526857|ref|ZP_06671541.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M1015]
gi|257281690|gb|EEV11827.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257284720|gb|EEV14840.1| lipoprotein [Staphylococcus aureus subsp. aureus M876]
gi|282313769|gb|EFB44162.1| lipoprotein [Staphylococcus aureus subsp. aureus C101]
gi|282322343|gb|EFB52667.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M899]
gi|290920415|gb|EFD97479.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M1015]
gi|291467206|gb|EFF09724.1| lipoprotein [Staphylococcus aureus subsp. aureus M809]
Length = 205
Score = 41.6 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 24/92 (26%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
++G+ F L+ K
Sbjct: 61 HRKEFEKVGEQ---------FFKDNFGLKVKA 83
>gi|257425549|ref|ZP_05601974.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428208|ref|ZP_05604606.1| lipoprotein [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430838|ref|ZP_05607220.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|293501300|ref|ZP_06667151.1| lipoprotein [Staphylococcus aureus subsp. aureus 58-424]
gi|257272006|gb|EEV04144.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275049|gb|EEV06536.1| lipoprotein [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278966|gb|EEV09585.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|291096305|gb|EFE26566.1| lipoprotein [Staphylococcus aureus subsp. aureus 58-424]
Length = 205
Score = 41.6 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 24/92 (26%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
++G+ F L+ K
Sbjct: 61 HRKEFEKVGEQ---------FFKDNFGLKVKA 83
>gi|21283104|ref|NP_646192.1| hypothetical protein MW1375 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486325|ref|YP_043546.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253733265|ref|ZP_04867430.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH130]
gi|297207855|ref|ZP_06924288.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300911940|ref|ZP_07129383.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH70]
gi|21204544|dbj|BAB95240.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MW2]
gi|49244768|emb|CAG43204.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253728805|gb|EES97534.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH130]
gi|296887429|gb|EFH26329.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300886186|gb|EFK81388.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH70]
Length = 305
Score = 41.6 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 24/92 (26%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
++G+ F L+ K
Sbjct: 61 HRKEFEKVGEQ---------FFKDNFGLKVKA 83
>gi|300777002|ref|ZP_07086860.1| possible outer membrane protein OmpA [Chryseobacterium gleum ATCC
35910]
gi|300502512|gb|EFK33652.1| possible outer membrane protein OmpA [Chryseobacterium gleum ATCC
35910]
Length = 212
Score = 41.6 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 49/168 (29%), Gaps = 15/168 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ + + I ++ C + +K + + + D +
Sbjct: 1 MKKTLIILSIGALLAACNKKAEQKTEAAKDTVAIGNTAATEKSAGETTQFD-----INAV 55
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM---LQLIATILNKFPSTVIAIQSHTD 118
+ + +GD P + F ++ +++ F + L + T + + +
Sbjct: 56 PVSTAEVGDFPFFGFPKGLDFQNK-PVQRSFDRLYFPLNGVMTPIEGKVWKTYVVNGKGN 114
Query: 119 SIGTLKNNLLISQERA------DVIKSYLIQRGVSSNRFISVRGFAYK 160
+ L S + A I + + + F +
Sbjct: 115 TEEWSLPYFLKSYDEAITKVGGVKIFDGKVSQPELDRIKEEAKYFGEE 162
>gi|323439511|gb|EGA97232.1| putative lipoprotein [Staphylococcus aureus O11]
Length = 302
Score = 41.6 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ L + +SGC + E K + + AE + +
Sbjct: 1 MLKKAKLILIATLLLSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|302333096|gb|ADL23289.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 298
Score = 41.6 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ L + +SGC + E + + AE + +
Sbjct: 1 MLKKAKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
++G+ F L+ K
Sbjct: 61 HRKEFEKVGEQ---------FFKDNFGLKVKA 83
>gi|322387290|ref|ZP_08060900.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus infantis
ATCC 700779]
gi|321141819|gb|EFX37314.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus infantis
ATCC 700779]
Length = 238
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L LS + T++ C + T S + ++ + ++ +
Sbjct: 1 MKKRYLVLSGLLALTLAACSQEKPATSENQTSTEEKTVQEGTVGSKSQEASQKKAEVVNK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
V D I + L + + +
Sbjct: 61 GDYYSVQGKYDEIVIANKHYPLSKDYNPGENPTAKAELLKLIAAMQE 107
>gi|297207856|ref|ZP_06924289.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|296887430|gb|EFH26330.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC 51811]
Length = 304
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L + +SGC + E K + + AE + +
Sbjct: 1 MFKRIKLILIATIILSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|295108132|emb|CBL22085.1| hypothetical protein [Ruminococcus obeum A2-162]
Length = 171
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 17/166 (10%), Positives = 44/166 (26%), Gaps = 17/166 (10%)
Query: 2 IKEL-----GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+K++ L++F +++ CG ++ + G + D ++ +
Sbjct: 1 MKKIKLVGVTLALFCTLSMAACGSTQTGQENQSEP---PAYSQGEMPGGNKDADAEKGKE 57
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK-KFLPMLQLIATILNKFPSTVIAIQS 115
+L + V + + +A ++S
Sbjct: 58 ELPGNLDDIEAEA---IWGGSVAEFQDGSFQVVPMEADAQTTKLAA-----SGMESTLES 109
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
T S G + + A + + SV +
Sbjct: 110 ITVSYGDDCTFHIANINSATGAVEFEAATASDVKKSTSVYIYGETQ 155
>gi|49486324|ref|YP_043545.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|49244767|emb|CAG43203.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
MSSA476]
Length = 304
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L + +SGC + E K + + AE + +
Sbjct: 1 MFKRIKLILIATIILSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|21283103|ref|NP_646191.1| hypothetical protein MW1374 [Staphylococcus aureus subsp. aureus
MW2]
gi|300911941|ref|ZP_07129384.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH70]
gi|21204543|dbj|BAB95239.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MW2]
gi|300886187|gb|EFK81389.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH70]
Length = 304
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L + +SGC + E K + + AE + +
Sbjct: 1 MFKRIKLILIATIILSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|319649925|ref|ZP_08004075.1| hypothetical protein HMPREF1013_00680 [Bacillus sp. 2_A_57_CT2]
gi|317398363|gb|EFV79051.1| hypothetical protein HMPREF1013_00680 [Bacillus sp. 2_A_57_CT2]
Length = 254
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 29/87 (33%), Gaps = 3/87 (3%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L L + I ++ CG K ++ + + +++ + + Q
Sbjct: 1 MKKLMYPFLLVLISAVLAACGADDESKSADKKEEAKTAETDQQDQQKQMEEMQKKMDKQK 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE 85
D V+ + D + S
Sbjct: 61 LDEEKTVAIVNDQEILGREYNSVLTSS 87
>gi|159896789|ref|YP_001543036.1| FKBP-type peptidylprolyl isomerase [Herpetosiphon aurantiacus
ATCC 23779]
gi|159889828|gb|ABX02908.1| peptidylprolyl isomerase FKBP-type [Herpetosiphon aurantiacus
ATCC 23779]
Length = 166
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 6/95 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + LSM + T+ GCG +R + + S T + + + + +++ +
Sbjct: 1 MKRILLSMLVAVTLIGCGEIARPENPTAVPTSATTGVDISDVSAVIPALPNGLEVKQTAS 60
Query: 62 GIV----VSRIGDMITCYIPVHVSFVSEVFLEKKF 92
G+ V G +T V + +L+
Sbjct: 61 GLRYVDIVVGSGPEVTAGSTAEVFYTG--YLKSDG 93
>gi|209525121|ref|ZP_03273665.1| OmpA/MotB domain protein [Arthrospira maxima CS-328]
gi|209494530|gb|EDZ94841.1| OmpA/MotB domain protein [Arthrospira maxima CS-328]
Length = 322
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 1/80 (1%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + + ++ I L+++P + I HTD G+ N ++ RA
Sbjct: 208 NRIYFNFGSAQINPQDMKIITRITEFLDQYPKLSLRIIGHTDLRGSAAINQQLALNRATA 267
Query: 137 IKSYLIQRGVSSNRFISVRG 156
++ + + + + + G
Sbjct: 268 VRD-ALTKQGIDPKRLEIVG 286
>gi|152978834|ref|YP_001344463.1| TRAP dicarboxylate transporter- DctP subunit [Actinobacillus
succinogenes 130Z]
gi|150840557|gb|ABR74528.1| TRAP dicarboxylate transporter- DctP subunit [Actinobacillus
succinogenes 130Z]
Length = 329
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 17/163 (10%), Positives = 48/163 (29%), Gaps = 16/163 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L + + ++GC + + + V + +++ + + S ++K ++ + D
Sbjct: 1 MKKIFL-LLMSVVLAGCNDSGTDNRTVKIVAAHNQTNITSPYQSGMNKLKEAAE---ADK 56
Query: 62 GIVVSRIGDMITCYIPVHV--SFVSEVFL---EKKFLP-------MLQLIATILNKFPST 109
V I V + + F+ L + + N +
Sbjct: 57 QFEVEVHAGTIGTNENELVEKLVLGGADIVLVSPGFMTSAGINEVDLFSLLYLFNDYKHW 116
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+ + + + R R I
Sbjct: 117 EAVVDGEIGKKLSDIIYEKSGNKYRVIAYWSAAVRHWYGKRPI 159
>gi|1699206|gb|AAB37389.1| porin-associated protein, PAP=OmpA homolog {peptidoglycan binding
domain} [Rhodospirillum rubrum, FR1, Peptide Partial,
179 aa]
Length = 179
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 15/127 (11%), Positives = 39/127 (30%), Gaps = 8/127 (6%)
Query: 10 FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIG 69
++T + +S + T + D+ + + Q+ I ++ +G
Sbjct: 57 ALVTALGAGAPSS----NPTVAAKAQTSFDXWAEEAEEDRQPEHIREAKQNFEIAMNALG 112
Query: 70 DM----ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + L + L ++ + + + D+ G
Sbjct: 113 GAPAPAVVSEGFKVFFALDSARLSPESEATLDRVSQAFLSGSPASVMVVGYADTSGPADY 172
Query: 126 NLLISQE 132
N+L+SQ
Sbjct: 173 NILLSQR 179
>gi|226311596|ref|YP_002771490.1| ABC transporter substrate binding protein [Brevibacillus brevis
NBRC 100599]
gi|226094544|dbj|BAH42986.1| ABC transporter substrate binding protein [Brevibacillus brevis
NBRC 100599]
Length = 551
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 14/177 (7%), Positives = 41/177 (23%), Gaps = 22/177 (12%)
Query: 1 MIKELGLS-----MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M K + + + + I+GC S + K+ +K + +
Sbjct: 1 MKKRVLSATMTSLVALAMLIAGCSSTSTTQAPAEQAKTETPAPADKPAKTGPKQLIIGRG 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPV----HVSFVSEVFLEKKFLP----MLQLIATILNKFP 107
+ + G+ + L + L
Sbjct: 61 ADTKGLDPITQTDGETFKVTENIMDTLIGFADGSTELAPSLAEKWEVTPDGLVYTLKLRS 120
Query: 108 STVIA---------IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
++ + + + + + + +G +++ SV
Sbjct: 121 GVKFHDGTDFNAEAVKYNFERWSDKSHPQHSPEGYEYYVSQFGGYKGDATHIIKSVE 177
>gi|282895288|ref|ZP_06303499.1| lipoprotein [Staphylococcus aureus A8117]
gi|282762339|gb|EFC02488.1| lipoprotein [Staphylococcus aureus A8117]
Length = 121
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 25/92 (27%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L + +SGC + E + + AE + +
Sbjct: 1 MFKRIKLILIATIILSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
++G+ F L+ K
Sbjct: 61 HRKEFEKVGEQ---------FFKDNFGLKVKA 83
>gi|269203114|ref|YP_003282383.1| hypothetical protein SAAV_1477 [Staphylococcus aureus subsp.
aureus ED98]
gi|262075404|gb|ACY11377.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus ED98]
gi|329727265|gb|EGG63721.1| putative lipoprotein [Staphylococcus aureus subsp. aureus 21172]
Length = 298
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 25/92 (27%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L + +SGC + E + + AE + +
Sbjct: 1 MFKRIKLILIATIILSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
++G+ F L+ K
Sbjct: 61 HRKEFEKVGEQ---------FFKDNFGLKVKA 83
>gi|148998303|ref|ZP_01825772.1| hypothetical protein CGSSp11BS70_03846 [Streptococcus pneumoniae
SP11-BS70]
gi|168576471|ref|ZP_02722345.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
MLV-016]
gi|194398047|ref|YP_002037288.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae G54]
gi|307067244|ref|YP_003876210.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
AP200]
gi|147755946|gb|EDK62990.1| hypothetical protein CGSSp11BS70_03846 [Streptococcus pneumoniae
SP11-BS70]
gi|183577686|gb|EDT98214.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
MLV-016]
gi|194357714|gb|ACF56162.1| D-alanyl-D-alanine carboxypeptidase, putative [Streptococcus
pneumoniae G54]
gi|306408781|gb|ADM84208.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
AP200]
Length = 238
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 11/107 (10%), Positives = 27/107 (25%), Gaps = 2/107 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + LS + T++ C + + S A+ + ++ +
Sbjct: 1 MKKRYIVLSGLLAVTLAACSQEKAKNEDGTAKTEQTAKADGTVGSKSQGAAQKKAEVVNK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
+ D I + L + + +
Sbjct: 61 GDYYSIQGKYDEIIVANKHYPLSKDYNPGENPTAKAELVKLIKAMQE 107
>gi|19554064|ref|NP_602066.1| hypothetical protein NCgl2776 [Corynebacterium glutamicum ATCC
13032]
gi|62391713|ref|YP_227115.1| hypothetical protein cg3181 [Corynebacterium glutamicum ATCC 13032]
gi|21325647|dbj|BAC00268.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41327055|emb|CAF20899.1| putative secreted protein [Corynebacterium glutamicum ATCC 13032]
Length = 166
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 18/157 (11%), Positives = 41/157 (26%), Gaps = 14/157 (8%)
Query: 2 IKELGLSMFIMTT---ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K + ++ ++ CG + E + T+ ++ Q
Sbjct: 1 MKRIYATLASGLLCLSLAACGGVTVEGDDSPSTTAAPTESSAGSSSTARSTERSSQASQS 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+G +R G V+ + L + I I D
Sbjct: 61 NGSGGSTARDGAAEEIDGLPEVTVERSA----EAQAFLDAL-------KDEKIDISGVED 109
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ N S+ + + + + SV+
Sbjct: 110 QLIATARNYCSSENKDQNVTVDAVAGQLIVQGRTSVK 146
>gi|254428999|ref|ZP_05042706.1| conserved hypothetical protein [Alcanivorax sp. DG881]
gi|196195168|gb|EDX90127.1| conserved hypothetical protein [Alcanivorax sp. DG881]
Length = 126
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 9/94 (9%), Positives = 31/94 (32%), Gaps = 5/94 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L++ + ++ C +++ + +V T + + S + ++ + + + V
Sbjct: 1 MLAILVALMLAACSASNKGQMEVTEDGEVVTKVYSNNSLLSSRISVEDLRQKRAGDLLQV 60
Query: 66 SRIGDM-----ITCYIPVHVSFVSEVFLEKKFLP 94
+ + + LE + P
Sbjct: 61 QAVLENDWKFQLDFQYKFKWFDADGFELEPEAQP 94
>gi|194295656|gb|ACF40855.1| outer membrane protein [Riemerella anatipestifer]
gi|194295658|gb|ACF40856.1| outer membrane protein [Riemerella anatipestifer]
gi|194295660|gb|ACF40857.1| outer membrane protein [Riemerella anatipestifer]
gi|194295662|gb|ACF40858.1| outer membrane protein [Riemerella anatipestifer]
gi|194295664|gb|ACF40859.1| outer membrane protein [Riemerella anatipestifer]
gi|194295666|gb|ACF40860.1| outer membrane protein [Riemerella anatipestifer]
Length = 270
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 17/145 (11%), Positives = 42/145 (28%), Gaps = 15/145 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V + + K ++ + ++ +
Sbjct: 140 GCPWPDTDNDGVLDKDDKCPSVPGLPEYNGCPKPQEAYAVEATGA--------------L 185
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 186 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 245
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKY 161
+ + ++ + + +G
Sbjct: 246 VVA-ALEARGVNPSQLKSKGVGSAE 269
>gi|254477135|ref|ZP_05090521.1| OmpA/MotB [Ruegeria sp. R11]
gi|214031378|gb|EEB72213.1| OmpA/MotB [Ruegeria sp. R11]
Length = 278
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 57/184 (30%), Gaps = 23/184 (12%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG------------IVVSRI 68
AS DT + + + D+ +L G I+
Sbjct: 99 ASDTNPMDAQQAQGDTGVQDDQEREQTDETFRALAEELNGRGGESMVSLEMAQHIITRVT 158
Query: 69 GDMITCYIPVHVSFVSEVFLEKK----FLPMLQLIATILNKFPSTVIAIQSHTDSIGT-- 122
+ + + + + F +++++A + IA+ HT S
Sbjct: 159 DEGLVIELFDTETSPLFKEGTPEPTLLFRDIIEMVAR-VTGVVENNIAVGGHTRSHPVVI 217
Query: 123 -LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S RAD+ + L G S R V G A + D N N RIEI
Sbjct: 218 ANNPVWELSHARADMTRVMLESGGTKSKRIHRVTGHADRKLTDANPMA---ARNNRIEIV 274
Query: 182 IFPR 185
+ +
Sbjct: 275 LLRK 278
>gi|56461515|ref|YP_156796.1| hypothetical protein IL2415 [Idiomarina loihiensis L2TR]
gi|56180525|gb|AAV83247.1| Uncharacterized conserved secreted protein [Idiomarina loihiensis
L2TR]
Length = 622
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 22/51 (43%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
K++ L++ ++ + C AS+E+ +S N + ++E
Sbjct: 5 KKIALAVSLVLMTTACSDASKEEATTATVESKTATTENTTQNAEQTESEKA 55
>gi|253732129|ref|ZP_04866294.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253724136|gb|EES92865.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH959]
Length = 304
Score = 41.2 bits (95), Expect = 0.063, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 24/92 (26%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
++G+ F L+ K
Sbjct: 61 HRKEFEKVGEQ---------FFKDNFGLKVKA 83
>gi|319649803|ref|ZP_08003956.1| hypothetical protein HMPREF1013_00560 [Bacillus sp. 2_A_57_CT2]
gi|317398557|gb|EFV79242.1| hypothetical protein HMPREF1013_00560 [Bacillus sp. 2_A_57_CT2]
Length = 227
Score = 41.2 bits (95), Expect = 0.065, Method: Composition-based stats.
Identities = 18/153 (11%), Positives = 46/153 (30%), Gaps = 14/153 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSN--DTDIVNKRFGSSLDKAEDEFQMQL 58
M K + + ++GCG + + N +T + ++ + + +
Sbjct: 4 MAKFMLILGLFAVILAGCGTSQNDSGNGSDPGQNEEETASDGQDGQEQTEEQDPAEEGTV 63
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
D V+ + +T +E + + N+ S +
Sbjct: 64 DDGQSVIRILEQNMT------------YTVEGEAKEETAFLKHSDNQNYSMYVLPAYELT 111
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ K+ L +S+ ++ L+ N
Sbjct: 112 AEEPNKDVLYLSENDQVFMRIELLPNDADWNMI 144
>gi|218261428|ref|ZP_03476249.1| hypothetical protein PRABACTJOHN_01915 [Parabacteroides johnsonii
DSM 18315]
gi|218224038|gb|EEC96688.1| hypothetical protein PRABACTJOHN_01915 [Parabacteroides johnsonii
DSM 18315]
Length = 214
Score = 41.2 bits (95), Expect = 0.065, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
Query: 38 IVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
+R + L+ +D + V + + + F ++K+ L
Sbjct: 117 AQTERVQNLLNSVKDALLG-FSSDELTVREKDGKVYVAMSDKLLFESGSARVDKRGKEAL 175
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
+A +LNK + I+ HTDS +
Sbjct: 176 AKLAEVLNKQSDIDVYIEGHTDSKPINTAQFKDNW 210
>gi|209964212|ref|YP_002297127.1| chemotaxis MotB protein, putative [Rhodospirillum centenum SW]
gi|7025367|gb|AAF35853.1|AF220007_1 polar flagellar motor protein MopB [Rhodospirillum centenum]
gi|209957678|gb|ACI98314.1| chemotaxis MotB protein, putative [Rhodospirillum centenum SW]
Length = 239
Score = 41.2 bits (95), Expect = 0.065, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 20/152 (13%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPS 108
E + + ++++R + +P + F + L L L + +
Sbjct: 96 FETQMAGHPELAQVLITRRDGRLVLALPADLLFAPGDAALSPAGLRAL-FVLGGVAGNIG 154
Query: 109 TVIAIQSHTDSIG---TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY---- 161
+ + HTD +N +S RA + L G R I+VRG A
Sbjct: 155 NALEVVGHTDPRPAGSRWPSNWELSLARAQAVADALHGAGYL--RAITVRGQADAQFPET 212
Query: 162 ----PIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
P+ + +R+++ + G ++
Sbjct: 213 APFLPVA-----ERMRLARRVDVIVAEHGGMR 239
>gi|32475799|ref|NP_868793.1| MotB-like protein [Rhodopirellula baltica SH 1]
gi|32446342|emb|CAD76170.1| probable MotB homolog [Rhodopirellula baltica SH 1]
gi|327540987|gb|EGF27543.1| OmpA/MotB domain protein [Rhodopirellula baltica WH47]
Length = 251
Score = 41.2 bits (95), Expect = 0.065, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 6/112 (5%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-----KNNLLISQ 131
V V L +L+ A L P I ++ H + +L++
Sbjct: 119 SVVFFEVGSDLLTPASQRILEQTAQQLRGKPQ-RIEVRGHVSAEYAARTVGTDEAMLLAI 177
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
RA +K YL+ + ++ V PI N T N+ R+E+ +
Sbjct: 178 RRAAAVKRYLVSKQGIASDRFRVSSAEATEPITRNATITKFGNDSRVEVFLL 229
>gi|328553994|gb|AEB24486.1| thermonuclease precursor [Bacillus amyloliquefaciens TA208]
Length = 324
Score = 41.2 bits (95), Expect = 0.065, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 36/118 (30%), Gaps = 9/118 (7%)
Query: 2 IKELGL---SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+ L ++ + +++ CG S K + T +K + + E + Q
Sbjct: 1 MKKWLLCIGALSLSFSLAACGSDSASTDKTDSDSNKTTQQEDKGKQETKTDQKTETEKQS 60
Query: 59 QDTGIV------VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ D V ++ + ++ + +L P T
Sbjct: 61 NNKSADESKKSSAKETPDKKKLVDVTLNKTVDGDTIKVNYKGEVKTVRYLLIDTPETK 118
>gi|311294121|gb|ADP88816.1| outer membrane protein [Vibrio parahaemolyticus]
Length = 182
Score = 41.2 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 65/184 (35%), Gaps = 10/184 (5%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV------NKRFGSSLDKAEDEFQMQL 58
+ ++ C S + KS+DT I L +DE ++
Sbjct: 3 FAIIFTSNVALANCINQSENYVTSKVLKSSDTKITQVDGKLASVINEDLSIVQDEKIEKV 62
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ T S D + + V +E +L + ++N+ I ++ HTD
Sbjct: 63 EATNATESCTFDKNSMSL-VLHYGTNEHYLTNVHKQAISKYLELVNE--DKRILVEGHTD 119
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+G+ N +S RA YL + NR + + F PI + N+R+
Sbjct: 120 DVGSQAYNKSLSLRRASTASKYLKKDLGLGNRIVE-KAFGESAPICKVNENKLSGCNRRV 178
Query: 179 EIQI 182
+ I
Sbjct: 179 VLTI 182
>gi|226940721|ref|YP_002795795.1| hypothetical protein LHK_01802 [Laribacter hongkongensis HLHK9]
gi|226715648|gb|ACO74786.1| hypothetical protein LHK_01802 [Laribacter hongkongensis HLHK9]
Length = 188
Score = 41.2 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 51/202 (25%), Gaps = 41/202 (20%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++ L + + ++GC ++E K + + G + D +
Sbjct: 1 MRRLVILFSALLLLAGCATPAKELKGSLTPPAGMGYAIVALAGWAFDPDSATLEADYAGE 60
Query: 62 GIVVSRIGDMITCYIPVHVSF--VSEV---------FLEKKFLPMLQLI----------- 99
+ G I + F L +Q
Sbjct: 61 N---GQPGGRIYASLLTDSLFGPEGSSPRNGKLALLTLPPGQYRFVQAFGYYKQDMGFWS 117
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
+ +FP + +++ + L +S I+ L R V
Sbjct: 118 GQKITRFPMNAPFVVRAGEAVYLGEIWLDLSYRPELQIRDTLQYNLGQIQRVWHV----- 172
Query: 160 KYPIDTNDTKVGRQNNQRIEIQ 181
NDT R+EI
Sbjct: 173 ------NDTSAL-----RVEIL 183
>gi|226315156|ref|YP_002775052.1| ABC transporter substrate binding protein [Brevibacillus brevis
NBRC 100599]
gi|226098106|dbj|BAH46548.1| ABC transporter substrate binding protein [Brevibacillus brevis
NBRC 100599]
Length = 342
Score = 41.2 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 56/196 (28%), Gaps = 36/196 (18%)
Query: 2 IKELGLSMFIMTTIS-GCGL-ASREKKKVFLHKSNDTDIVNKRFG-------------SS 46
+K+L L++ ++ GC S + + KR
Sbjct: 1 MKKLLLALTTFAVLATGCSTGTSAPADQPGGQAAGQEGAAKKRIALILPEKIGVNPFFQQ 60
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDM-ITCYIPVHVSFVSEVFLEKKF--LPMLQLIATIL 103
+D+ + +L + I + V V+ ++ + F L+ +AT
Sbjct: 61 MDEGAKKAAQELGAEVKTIESTDHGAIEENLRVAVAENYDLIITSSFTSEDALKKVAT-- 118
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS-----------YLIQRGVSSNRFI 152
+ P AI + +++ QE A ++ + ++
Sbjct: 119 -ENPDRNFAIIDTVVDLPNVRSVTFREQEAAYLVGAAAGLATKTNKVGMVVALDIPQLKK 177
Query: 153 SVRGFAY----KYPID 164
GF P
Sbjct: 178 WTVGFGEGLKATNPKA 193
>gi|89072005|ref|ZP_01158601.1| hypothetical protein SKA34_08223 [Photobacterium sp. SKA34]
gi|89052106|gb|EAR57557.1| hypothetical protein SKA34_08223 [Photobacterium sp. SKA34]
Length = 172
Score = 41.2 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 28/88 (31%), Gaps = 1/88 (1%)
Query: 1 MIKELGLSMFIMTTISGC-GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L + + I+GC + E++ + NDT + K D+
Sbjct: 1 MNKTLFILLLFTFMITGCLSSSPSEEENQSVATDNDTVNSVQPPVFFPVKETDDVNDSNN 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ + + + D I +
Sbjct: 61 EAEVEIDTVNDDIFDKQNSEKFPTLDAK 88
>gi|306845321|ref|ZP_07477896.1| lipoprotein [Brucella sp. BO1]
gi|306274237|gb|EFM56049.1| lipoprotein [Brucella sp. BO1]
Length = 129
Score = 41.2 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 18/143 (12%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+ E Q + + V V + + + L + + K
Sbjct: 1 MQVFPQEPTAQATMWPARPPKQTVSVYFPQDVTVFRPTSAQINQ-----LHTLLWPVPKH 55
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS----VRGFAYKYP 162
I ++ TD+ + +++ RA I ++LI +GV ++R V+ +A P
Sbjct: 56 ----INVRGLTDNNCPTPGDTQVARVRALAIYNWLINQGVPASRITISYAPVKDYASNAP 111
Query: 163 IDTNDTKVGRQNNQRIEIQIFPR 185
+ GR N+R++I+I +
Sbjct: 112 LSP-----GRVLNRRVDIEILRK 129
>gi|289665512|ref|ZP_06487093.1| flagellar motor protein MotB [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289668313|ref|ZP_06489388.1| flagellar motor protein MotB [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 385
Score = 41.2 bits (95), Expect = 0.067, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 67/177 (37%), Gaps = 15/177 (8%)
Query: 22 SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ----DTGIVVSRIGDMITCYIP 77
R++ + KR + + ++ +++ D + I
Sbjct: 107 GRKRDNAADTTEDSRSKDKKRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIV 166
Query: 78 VH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN----NLLI 129
+ + L+ + +L+ +++ +N+ P+ I+I HTD+ + N +
Sbjct: 167 DKQNRPMFDIGRDQLKPYTVAILRELSSFINQVPN-HISITGHTDTTAYSSDAGYTNWEL 225
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
S +RA+ + L+ G+S + V G + D D + N+RI I + +
Sbjct: 226 SADRANAARRALVGGGMSDAKVTRVVGLSSSVLFDKIDPQ--NPINRRISIVVMTQD 280
>gi|56695114|ref|YP_165461.1| chemotaxis protein MotB [Ruegeria pomeroyi DSS-3]
gi|56676851|gb|AAV93517.1| chemotaxis protein MotB [Ruegeria pomeroyi DSS-3]
Length = 285
Score = 41.2 bits (95), Expect = 0.067, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 55/189 (29%), Gaps = 20/189 (10%)
Query: 12 MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK---AEDEFQMQLQDTGIV---- 64
+G G +R + + + G L++ E Q + ++ +
Sbjct: 98 AMVTTGTGGVNRRRADADRSRGSTGVDRQGGEGEPLEEFKTLEAALQGRGGESLVSEQLR 157
Query: 65 ---VSRIGDM----ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
V+R+ D F + + + L + S IA+ H
Sbjct: 158 KHIVTRVTDEGLIVELISTDESPLFETNSDRPTQLMKELAKVVVRAADMVSNGIAVGGHI 217
Query: 118 DSIGT---LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
+ +S RA+ + G+ R V G A + D N
Sbjct: 218 RAHPVVLARNPVWELSTARAERTRVLFEGLGMKEERIQRVTGHADRKLTDPNPMA---AR 274
Query: 175 NQRIEIQIF 183
N RIEI
Sbjct: 275 NDRIEIIFL 283
>gi|251771203|gb|EES51784.1| hypothetical protein UBAL3_95450004 [Leptospirillum
ferrodiazotrophum]
Length = 236
Score = 41.2 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 64/202 (31%), Gaps = 26/202 (12%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + ++ + + + + + D EF+ L G
Sbjct: 21 LMTGLMMVFLLVAASYMTDMEIANYKIRKIAVRYSEVHDALYRD-LAREFRNDLPRWGAE 79
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI----ATIL--NKFPS--TVIAIQSH 116
+ R I P + L +F +L IL K+ T I I+ H
Sbjct: 80 LHRD-LSIRFREPDVLFTTGSDALNPRFKAILDNFFPRYIAILDSKKYRHSITEIRIEGH 138
Query: 117 TDSIGT----------LKNNLLISQERADVIKSYLIQRGVSS------NRFISVRGFAYK 160
T S NN+ +SQ R Y+++ S R ++ G +
Sbjct: 139 TSSFWNKGTPPNSDAAYFNNMALSQARTRSTLLYVMELPAVSGERPWLKRVLTANGLSSS 198
Query: 161 YPIDTNDTKVGRQNNQRIEIQI 182
I +D + +QR+E ++
Sbjct: 199 RLIYRSDGREDPVRSQRVEFRV 220
>gi|224371595|ref|YP_002605759.1| hypothetical protein HRM2_45390 [Desulfobacterium autotrophicum
HRM2]
gi|223694312|gb|ACN17595.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 850
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 52/184 (28%), Gaps = 19/184 (10%)
Query: 1 MIKELGLSMFIMTT----ISGCGLASREKKKVF-------LHKSNDTDIVNKRFGSSLDK 49
M K+L + M ++GC + +V + + D + +
Sbjct: 4 MKKKLIALLAAMLVFAFALTGCSSDDDDTTEVAGVEGVIYVDANAKADGDGSNWSEAYTD 63
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF--VSEVFLEKKFLPMLQLIATILNKFP 107
+ I V++ + + F + +V + F ++ +
Sbjct: 64 LQAALASAEAGDQIWVAKGTYYPSATDDENEYFLMLDDVDVYGGFNGDETELSA--RDWE 121
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF---AYKYPID 164
+ + G +N A+ I + G + +S+ G P D
Sbjct: 122 TNTTVLSGDIGIAGDNSDNTDNIIIAANNIMNGFTITGGNGFSSMSMEGMPLDGE-MPTD 180
Query: 165 TNDT 168
+
Sbjct: 181 DETS 184
>gi|332970081|gb|EGK09078.1| competence lipoprotein ComL [Kingella kingae ATCC 23330]
Length = 268
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 47/161 (29%), Gaps = 19/161 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ L + + +S C + K N ++ D+ E + +L D
Sbjct: 1 MKKFLLVISVAAALSACASNASTVSKDAQLTQNWSN----------DQLYSEARQELNDG 50
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKF--------LPMLQLIATILNKFPSTVIAI 113
+ + + + +E + LQ +A +P + +
Sbjct: 51 NYTRATALYELLRARQADGRYTEQSLIESAYAHFKNEEPAKALQNLARFEQNYP-ASVDM 109
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
G + S R + + + ++ R V
Sbjct: 110 DYALYLKGLVLFAEDQSFLRRLASQDWSDRDPEANRRAFRV 150
>gi|332884964|gb|EGK05217.1| hypothetical protein HMPREF9456_02887 [Dysgonomonas mossii DSM
22836]
Length = 389
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 45/123 (36%), Gaps = 6/123 (4%)
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI----PVHVSFVSEVFLEKKFLPMLQLIA 100
+ + + Q + +VV + + V + +++V +E + +A
Sbjct: 252 ADMARLAQRPVEQ-AEPTVVVKEVIREVQVSEEPVNNVVLFGINKVKVESHQEVNVYNVA 310
Query: 101 TILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
L + P + + +TD GT N +S++RA + + + + + V
Sbjct: 311 KYLKENPDKKVRVIGYTDKETGTAVINEKLSRQRAQNVADVITGKYGINQDRVIVEWEGQ 370
Query: 160 KYP 162
P
Sbjct: 371 TNP 373
>gi|325127278|gb|EGC50215.1| transferrin binding protein-like solute binding family protein
[Neisseria meningitidis N1568]
Length = 482
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 23/87 (26%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAKEDAPQAGSQG 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF 87
G ++ + + +
Sbjct: 61 QGAPSAQGSQDMAAVLEENTGNGGSAT 87
>gi|282919200|ref|ZP_06326935.1| lipoprotein [Staphylococcus aureus subsp. aureus C427]
gi|282317010|gb|EFB47384.1| lipoprotein [Staphylococcus aureus subsp. aureus C427]
gi|312438109|gb|ADQ77180.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus TCH60]
Length = 304
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 24/92 (26%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
++G+ F L+ K
Sbjct: 61 HRKEFEKVGEQ---------FFKDNFGLKVKA 83
>gi|326562208|gb|EGE12536.1| hypothetical protein E9G_01148 [Moraxella catarrhalis 7169]
gi|326567162|gb|EGE17284.1| hypothetical protein E9Q_07464 [Moraxella catarrhalis BC1]
Length = 204
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 54/179 (30%), Gaps = 27/179 (15%)
Query: 38 IVNKRFGSSLDKAED-------EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
V + D E EF L G + + I+ P + + L+
Sbjct: 14 QVRQIAEEYQDTQEQIYKALLHEFADDLPKWGAKIDKDTLTISFLSPDILFKTGQSDLQD 73
Query: 91 KFLPMLQ----LIATILNKFPST--VIAIQSHTDSIG--------TLKNNLLISQERADV 136
+ +L +++ + + I I+ HT S N+ +SQ+R
Sbjct: 74 NYKEILSDFFPRYIKVIDHYKDSINEIRIEGHTSSEWAAGVDADIAYFENMRLSQDRTRT 133
Query: 137 IKSYLI------QRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + Q ++ G + I ++R+ +I + +
Sbjct: 134 VLQFAYAIPEVSQYRPWIKTHLAAVGLSSAKTIKNESGLENAGASKRVTFRILTNADEQ 192
>gi|312887292|ref|ZP_07746895.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311300250|gb|EFQ77316.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 643
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 10/114 (8%)
Query: 78 VHVSFVSEVFLEKKFLPML-QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
+ + L +A+ + + I HTD IG +NL +SQERA
Sbjct: 531 SILFDFDRANSTAAYTKFLSNTVASSITD--GATVIIHGHTDIIGEEDHNLKLSQERARE 588
Query: 137 IK---SYLIQRGVSSNRFISVRGFAYK---YPIDTNDTKVGRQNNQRIEIQIFP 184
++ + + ++ GF P N+ R N+ + I I P
Sbjct: 589 VQSILERALAKAGKNSVKFETIGFGEDVSHSPF-DNNLPEERFYNRTVIIDIIP 641
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 15/97 (15%)
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ +L ++ L P T I++ + L IS +K Y++
Sbjct: 323 YHNILNILGDRLRANPGTTISLSGASGKGIADGTALAIS------VKQYIVNTFAIDGSR 376
Query: 152 ISVRGFAYKYPIDTNDTKVG-------RQNNQRIEIQ 181
I+ G P+ ++ G R ++R+++
Sbjct: 377 IATEGR--IKPLIPSEQPGGSKELVLLRAGDRRVDVT 411
>gi|295407760|ref|ZP_06817539.1| predicted protein [Staphylococcus aureus A8819]
gi|294967371|gb|EFG43421.1| predicted protein [Staphylococcus aureus A8819]
Length = 147
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 25/92 (27%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L + +SGC + E + + AE + +
Sbjct: 1 MFKRIKLILIATIILSGCSTTNNESNNETKSVPEEMEASKYVGQDFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
++G+ F L+ K
Sbjct: 61 HRKEFEKVGEQ---------FFKDNFGLKVKA 83
>gi|307729365|ref|YP_003906589.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307583900|gb|ADN57298.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 242
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 66/225 (29%), Gaps = 53/225 (23%)
Query: 2 IKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN--------KRFGSSLDKA 50
+K L +S + ++GC AS + SN+ + + + +D A
Sbjct: 1 MKRLFFASISSAAVLVVTGCTAASGPTFNAYSVDSNNAARIYRAECHGLFEGASTCMDVA 60
Query: 51 ------------------------------------EDEFQMQLQDTGIVVSRIGDMITC 74
E D G VV++ + +
Sbjct: 61 RRICGDKPVQVIDKMDVVRTADDRRSDSRVLHFKCGEVLSNKAPADIGAVVAQTATLESF 120
Query: 75 YIPVHVSFV-SEVF---LEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLI 129
+ F + + L IA + + I + HTD +G N +
Sbjct: 121 SLESDTLFPFGKSSRESMLPAAKARLDEIAARIRQHEHVSAITVVGHTDRLGPESINGPL 180
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
S RA+ ++ YL+ G+ + + +G P R
Sbjct: 181 SLARANTVRDYLVAHGLDGSIVL-AKGVGSSEPRTHCAEHDARAL 224
>gi|317051627|ref|YP_004112743.1| OmpA/MotB domain-containing protein [Desulfurispirillum indicum S5]
gi|316946711|gb|ADU66187.1| OmpA/MotB domain protein [Desulfurispirillum indicum S5]
Length = 193
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 12/103 (11%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
++ L + ++ +A+ L +A+ H+D G ++ RA+ + +Y
Sbjct: 100 FDLNGFTLTEAQKERIKELASSLQG----SVAVTGHSDHFGPAWAKERVANRRAESVAAY 155
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
L GVS S G + I TN N+R EI +
Sbjct: 156 LTTLGVSVA---SATGQSDHNQISTNP-----AQNRRAEITLT 190
>gi|261211767|ref|ZP_05926054.1| hypothetical protein VCJ_002030 [Vibrio sp. RC341]
gi|260839117|gb|EEX65749.1| hypothetical protein VCJ_002030 [Vibrio sp. RC341]
Length = 395
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 31/99 (31%), Gaps = 4/99 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L L++F+ + GC + ++ D + KR + Q
Sbjct: 1 MHKSLSLAVFLTLVLVGCQSEETQSTQLSSQAKADAVVAQKRQLAESFSQHYATYAQTLK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
T I D ++ + V + ++ +
Sbjct: 61 TQIT----ADNLSISMSELVDVAPNSEISQQLRSADNRV 95
>gi|224477262|ref|YP_002634868.1| putative ferrichrome binding protein [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222421869|emb|CAL28683.1| putative ferrichrome binding protein precursor [Staphylococcus
carnosus subsp. carnosus TM300]
Length = 304
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 13/119 (10%)
Query: 2 IKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K+L + + ++ ++ CG S ++K + T K+ D
Sbjct: 1 MKKLLIPMIILVLVLAACGNKSGDQKDSKKETRSYTMDNGKKIDVPKDPKRIAVVAPTYA 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM-------LQLIATILNKFPSTVIA 112
GI G+++ V L+ KF + + + ++ + P +I
Sbjct: 61 GGIK-KLGGNVVAVNSQVD----DSKVLKDKFKGVEKIGATGSEDVEKVIKQKPDLIIV 114
>gi|282904067|ref|ZP_06311955.1| putative lipoprotein [Staphylococcus aureus subsp. aureus C160]
gi|282595685|gb|EFC00649.1| putative lipoprotein [Staphylococcus aureus subsp. aureus C160]
Length = 261
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|282916753|ref|ZP_06324511.1| lipoprotein [Staphylococcus aureus subsp. aureus D139]
gi|282319240|gb|EFB49592.1| lipoprotein [Staphylococcus aureus subsp. aureus D139]
Length = 307
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|261599880|emb|CAP16950.1| outer membrane protein A [Acinetobacter baumannii]
Length = 226
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 160 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 219
Query: 115 SHTDSIG 121
HTD+ G
Sbjct: 220 GHTDNTG 226
>gi|257793738|ref|ZP_05642717.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257787710|gb|EEV26050.1| conserved hypothetical protein [Staphylococcus aureus A9781]
Length = 301
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 24/92 (26%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
++G+ F L+ K
Sbjct: 61 HRKEFEKVGEQ---------FFKDNFGLKVKA 83
>gi|170280279|gb|ACB12042.1| outer membrane protein A [Acinetobacter baumannii]
Length = 229
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 163 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 222
Query: 115 SHTDSIG 121
HTD+ G
Sbjct: 223 GHTDNTG 229
>gi|167966448|gb|ACA13273.1| outer membrane protein A [Acinetobacter baumannii]
Length = 229
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 163 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 222
Query: 115 SHTDSIG 121
HTD+ G
Sbjct: 223 GHTDNTG 229
>gi|167888787|gb|ACA09703.1| outer membrane protein A [Acinetobacter baumannii 3909]
gi|261599781|emb|CAP16951.1| outer membrane protein A [Acinetobacter baumannii]
Length = 229
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 163 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 222
Query: 115 SHTDSIG 121
HTD+ G
Sbjct: 223 GHTDNTG 229
>gi|109675218|gb|ABG37058.1| outer membrane protein A [Acinetobacter baumannii]
Length = 241
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ T + + + V F + + ++ ++ P + +A L+++P+ I+
Sbjct: 175 APVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIE 234
Query: 115 SHTDSIG 121
HTD+ G
Sbjct: 235 GHTDNTG 241
>gi|54302838|ref|YP_132831.1| hypothetical protein PBPRB1159 [Photobacterium profundum SS9]
gi|46916262|emb|CAG23031.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 197
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 18/74 (24%), Gaps = 1/74 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQ 59
M K L + ++GC L + L E L
Sbjct: 1 MKKHLLFMVAAAAFLAGCSSQPDAVNSYLLPTGVQSTTSQIGSNQPLLVIRPVEMAEHLA 60
Query: 60 DTGIVVSRIGDMIT 73
TG+V +
Sbjct: 61 GTGLVYQVSDTEVV 74
>gi|49483672|ref|YP_040896.1| lipoprotein [Staphylococcus aureus subsp. aureus MRSA252]
gi|282905833|ref|ZP_06313688.1| lipoprotein [Staphylococcus aureus subsp. aureus Btn1260]
gi|283958249|ref|ZP_06375700.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295427993|ref|ZP_06820625.1| lipoprotein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297591035|ref|ZP_06949673.1| lipoprotein [Staphylococcus aureus subsp. aureus MN8]
gi|49241801|emb|CAG40492.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282331125|gb|EFB60639.1| lipoprotein [Staphylococcus aureus subsp. aureus Btn1260]
gi|283790398|gb|EFC29215.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295128351|gb|EFG57985.1| lipoprotein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297575921|gb|EFH94637.1| lipoprotein [Staphylococcus aureus subsp. aureus MN8]
gi|315195384|gb|EFU25771.1| putative lipoprotein [Staphylococcus aureus subsp. aureus CGS00]
Length = 302
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|329736416|gb|EGG72685.1| ABC transporter, substrate-binding protein, family 5
[Staphylococcus epidermidis VCU045]
Length = 517
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 43/123 (34%), Gaps = 18/123 (14%)
Query: 1 MIKELGLSMFIM--TTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAED--- 52
M K + +++ ++GCG +E K V + ++ + + + +++
Sbjct: 1 MKKRVLMTVAASATLLLAGCGNGQKEDKDVTVSLPTEAKADKLDAQGYDATMPVYSAVYD 60
Query: 53 EFQMQLQDTGI--------VVSRIGDMITCYIPVHVSFVSEVFLEK-KFLPMLQLIATIL 103
+D GI V G + ++ +V F L+ + A +
Sbjct: 61 ALVKYDKDKGIKAGLADKWSVDESGKVYEFHLKKNVKFSDGSALDAKDVKFSIDR-AKAM 119
Query: 104 NKF 106
NK
Sbjct: 120 NKN 122
>gi|312891646|ref|ZP_07751156.1| protein of unknown function DUF1573 [Mucilaginibacter paludis DSM
18603]
gi|311295830|gb|EFQ72989.1| protein of unknown function DUF1573 [Mucilaginibacter paludis DSM
18603]
Length = 158
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 6/53 (11%), Positives = 21/53 (39%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
+K + L + ++ C +++ ++ ++ + G+ +D A
Sbjct: 1 MKRIFLGIITAGMLAACHQSNKTQQSNTTTETTVSAPGTTPAGAPVDTANAPI 53
>gi|298384145|ref|ZP_06993706.1| outer membrane protein [Bacteroides sp. 1_1_14]
gi|298263749|gb|EFI06612.1| outer membrane protein [Bacteroides sp. 1_1_14]
Length = 363
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ ++ + Q + ++ ++ L++ + +
Sbjct: 225 TAPVYYEPEPIVEQPKPQPVVKQPEPEPVAVVVEPMKQNIFFALNSALLQEDQQSKIDAM 284
Query: 100 ATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+ K+P++ +AI + D G + N+ +S++RA ++ L +G++++R ++
Sbjct: 285 VAYMEKYPASKVAITGYADKETGNPRINMTLSEKRAKIVADALKAKGIAADRIVT 339
>gi|242243205|ref|ZP_04797650.1| nickel (Ni2+)/peptide ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
W23144]
gi|242233328|gb|EES35640.1| nickel (Ni2+)/peptide ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
W23144]
Length = 517
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 43/122 (35%), Gaps = 16/122 (13%)
Query: 1 MIKE--LGLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAED--- 52
M K + ++ ++GCG +E K + + ++ + + + +++
Sbjct: 1 MKKRVLITMAASATFLLAGCGNDQKEDKNITVSLPTEAKADKLDAQGYDAAMPVYSAVYD 60
Query: 53 EFQMQLQDTGIV--------VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+D G+ V G + ++ +V F L+ K + A +N
Sbjct: 61 PLVKYDKDKGVKAGLAEKWHVDDSGKVYEFHLKKNVKFSDGSALDAKAVKFSIERAKAMN 120
Query: 105 KF 106
K
Sbjct: 121 KD 122
>gi|126729352|ref|ZP_01745166.1| OmpA/MotB [Sagittula stellata E-37]
gi|126710342|gb|EBA09394.1| OmpA/MotB [Sagittula stellata E-37]
Length = 155
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 5/136 (3%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ + ++ IG L L+ +
Sbjct: 18 IAAALSAVVAGGAVALAIIGQTTIARTESFRFSRGTS-LANGEEERLRGVLASALPDDRK 76
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ I HT + G NL +S++RA + + + + + ++V G P+ +D +
Sbjct: 77 HVVIVGHTGTTGDADANLELSEKRAQ-VAAQIARAMGLPDDRLTVTGIGGSAPLPQDDGE 135
Query: 170 VGRQ-NNQ--RIEIQI 182
R ++ R+++ +
Sbjct: 136 SDRAHQSRMARVDVTV 151
>gi|223984364|ref|ZP_03634504.1| hypothetical protein HOLDEFILI_01798 [Holdemania filiformis DSM
12042]
gi|223963659|gb|EEF68031.1| hypothetical protein HOLDEFILI_01798 [Holdemania filiformis DSM
12042]
Length = 275
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L + ++GC A +E T V + ++ ++
Sbjct: 1 MKKLLCCILAALVLTGCSAAPKENNTTPEGSEARTVKVGVIGEN--NEYWQPIIDEMAKD 58
Query: 62 GIVVS 66
+ +
Sbjct: 59 NVTIE 63
>gi|307295611|ref|ZP_07575447.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
gi|306878650|gb|EFN09870.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
Length = 234
Score = 40.8 bits (94), Expect = 0.082, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ + + + + T + +TD+ G+ + N +S RA + S L+ +G +
Sbjct: 140 PEGVGTISTLTQTAAQCGWTRFGVTGYTDTSGSNRYNDGLSLRRARNVAS-LMSQGGIAT 198
Query: 150 RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
++V G V N+R+EI
Sbjct: 199 DAMTVTGLGETQLKIETADGVREPMNRRVEIT 230
>gi|306841163|ref|ZP_07473879.1| lipoprotein [Brucella sp. BO2]
gi|306288789|gb|EFM60107.1| lipoprotein [Brucella sp. BO2]
Length = 129
Score = 40.8 bits (94), Expect = 0.084, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 45/139 (32%), Gaps = 10/139 (7%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+ E Q + + V V + + + L + + K
Sbjct: 1 MQVFPQEPTAQATMWPARPPKQTISVYFPQDVTVFRPTSAQINQ-----LHTLLWPVPKH 55
Query: 107 PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ ++ + G + + + + + + + + + V+ +A P+
Sbjct: 56 INVRGLTDNNCPTPGDTQVARVRALAIYNWLINQGVPASKITISYAPVKDYASNAPLSP- 114
Query: 167 DTKVGRQNNQRIEIQIFPR 185
GR N+R++I+I +
Sbjct: 115 ----GRVLNRRVDIEILRK 129
>gi|325299222|ref|YP_004259139.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM
18170]
gi|324318775|gb|ADY36666.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170]
Length = 370
Score = 40.8 bits (94), Expect = 0.085, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 44/134 (32%), Gaps = 17/134 (12%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
E + + + V + I ++ + + + L +
Sbjct: 250 EKKEEPAPAPEPVKVQPMRQNI-------FFLINSSEIRTSEQSKVNNLIAYLKEHTDAK 302
Query: 111 IAIQSHTD-SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK-YPIDTNDT 168
+++ + D + G + N +SQERA+ + ++ + I++ P N
Sbjct: 303 VSLCGYADKNTGNARINKKLSQERAEAVAE-ALKAEGIAADRITIDYKGDTEQPF--NVI 359
Query: 169 KVGRQNNQRIEIQI 182
+ R+ I I
Sbjct: 360 EEN-----RVTICI 368
>gi|319788617|ref|YP_004148092.1| peptidyl-dipeptidase Dcp [Pseudoxanthomonas suwonensis 11-1]
gi|317467129|gb|ADV28861.1| Peptidyl-dipeptidase Dcp [Pseudoxanthomonas suwonensis 11-1]
Length = 717
Score = 40.8 bits (94), Expect = 0.085, Method: Composition-based stats.
Identities = 14/143 (9%), Positives = 31/143 (21%), Gaps = 34/143 (23%)
Query: 1 MIKELGLSMFIMTTISGCGL-ASREKKKVFLHKSNDTDIVNKR----------------- 42
M+++L LS I ++ CG ++ E +
Sbjct: 1 MLRKLLLSSAIAVALTACGDRSANENAMPDSNPPASGAAQGDNALLAASTLPFQAPPFDR 60
Query: 43 --FGSSLDKAEDEFQMQLQD--------------TGIVVSRIGDMITCYIPVHVSFVSEV 86
G E+ + L + + ++
Sbjct: 61 IKDGDYQPAIEEGMRQHLAEVRAIADNPEPPTFANTFEALERSGELLTRAVTVFFAMTSA 120
Query: 87 FLEKKFLPMLQLIATILNKFPST 109
+ +A L + T
Sbjct: 121 NTNPTLQAAEEALAPKLAEHSDT 143
>gi|291278013|gb|ADD91481.1| outer mebrane protein A [Riemerella columbina]
gi|291278015|gb|ADD91482.1| outer mebrane protein A [Riemerella columbina]
Length = 326
Score = 40.8 bits (94), Expect = 0.085, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 44/145 (30%), Gaps = 15/145 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC R+ V D+ K D++ + +
Sbjct: 195 GCPWPDRDNDGVLDKDDKCPDVPGLVQYDGCPKTADDYATEATGA--------------L 240
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A I+ + HTD+ G NL +S+ERA
Sbjct: 241 QGIFFNFNKASIRPESNGKLDQAADIIKSSNGGTFLVTGHTDAKGNANYNLRLSRERAAS 300
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKY 161
+ + ++ S+ + RG
Sbjct: 301 VVA-ALEARGVSSSQLKSRGVGSAE 324
>gi|167966446|gb|ACA13272.1| outer membrane protein A [Acinetobacter baumannii]
Length = 232
Score = 40.8 bits (94), Expect = 0.085, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
T + + + V F + + ++ ++ P + +A L+++P+ I+ HTD+
Sbjct: 171 TPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDN 230
Query: 120 IG 121
G
Sbjct: 231 TG 232
>gi|29349889|ref|NP_813392.1| outer membrane protein [Bacteroides thetaiotaomicron VPI-5482]
gi|29341800|gb|AAO79586.1| outer membrane protein [Bacteroides thetaiotaomicron VPI-5482]
Length = 363
Score = 40.8 bits (94), Expect = 0.085, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ ++ + Q + ++ ++ L+K + +
Sbjct: 225 TAPVYYEPEPIVEQPKPQPVVKQPEPESVAVVVEPMKQNIFFALNSALLQKDQQSKIDAM 284
Query: 100 ATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+ K+P++ +AI + D G + N+ +S++RA ++ L +G++++R ++
Sbjct: 285 VAYMEKYPASKVAITGYADKETGNPRINMTLSEKRAKIVADALKAKGIAADRIVT 339
>gi|317056303|ref|YP_004104770.1| hypothetical protein Rumal_1636 [Ruminococcus albus 7]
gi|315448572|gb|ADU22136.1| hypothetical protein Rumal_1636 [Ruminococcus albus 7]
Length = 209
Score = 40.8 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 8/93 (8%)
Query: 1 MIKELGLSMFIMTTISGCG---LASREKKKVFLHKSNDTDIVNKRFGSS-----LDKAED 52
M K++ ++ + + ++ C S+ K KV K+ + D +
Sbjct: 1 MKKKIIFAVMLASLLTACSNNNSESKTKDKVSSEAEVSAGSSEKKVQDTKEIPVKDSSSA 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
E +L + + I ++
Sbjct: 61 ELTEELITEMNEAAEEEEGILISSEDIQLADTD 93
>gi|170288056|ref|YP_001738294.1| OmpA/MotB domain-containing protein [Thermotoga sp. RQ2]
gi|170175559|gb|ACB08611.1| OmpA/MotB domain protein [Thermotoga sp. RQ2]
Length = 288
Score = 40.8 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 32/99 (32%), Gaps = 7/99 (7%)
Query: 61 TGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
I V + + V F L + +L + I+ + + V+ + + D
Sbjct: 94 GKITVEERDEGTLIVLKDMVFFEPGSAKLTAEAKELLAKVGQIVIEHTTNVLEVYGYADD 153
Query: 120 -----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+N +S RA + ++ + R I
Sbjct: 154 RLPLPNSIYVSNWHLSSARAASVVNFFLTELK-EKRMIE 191
>gi|297585175|ref|YP_003700955.1| family 1 extracellular solute-binding protein [Bacillus
selenitireducens MLS10]
gi|297143632|gb|ADI00390.1| extracellular solute-binding protein family 1 [Bacillus
selenitireducens MLS10]
Length = 468
Score = 40.8 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 10/107 (9%), Positives = 37/107 (34%), Gaps = 8/107 (7%)
Query: 1 MIKELGLS-MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L+ + ++ C + E + ++D ++ +S E + +
Sbjct: 1 MKKATWLAGSMAVLALTACADQNTESETNTGAAASDGNVNQADEENSEANNEAGEEETVS 60
Query: 60 DTGIVVSR-------IGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ + + +GD + + + + + + ++ + +
Sbjct: 61 EDALEIEFWHAMGGGLGDTLEELVADYNASQDQYVITPEYQGSYEEL 107
>gi|160936915|ref|ZP_02084279.1| hypothetical protein CLOBOL_01804 [Clostridium bolteae ATCC
BAA-613]
gi|158440105|gb|EDP17852.1| hypothetical protein CLOBOL_01804 [Clostridium bolteae ATCC
BAA-613]
Length = 369
Score = 40.8 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 7/66 (10%), Positives = 20/66 (30%), Gaps = 3/66 (4%)
Query: 2 IKELGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K+L + ++ C A ++ T + ++ Q+
Sbjct: 1 MKKLAVLFLAAFMGLTACSSAQKDTPTESPTTEASTTATGTETADTQSVPSEK--EQIPH 58
Query: 61 TGIVVS 66
T + +
Sbjct: 59 TEVDIK 64
>gi|260551068|ref|ZP_05825272.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
gi|260405835|gb|EEW99323.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
Length = 360
Score = 40.8 bits (94), Expect = 0.087, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 26/64 (40%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L +SM ++GC S + + V + + ++ SS + Q Q+
Sbjct: 1 MKKILMMSMCSALLLAGCSKTSEQDQAVSKEQKSTAQKSTEQRDSSSLQTIAAMQKINQN 60
Query: 61 TGIV 64
+ +
Sbjct: 61 SKME 64
>gi|282919198|ref|ZP_06326933.1| lipoprotein [Staphylococcus aureus subsp. aureus C427]
gi|282317008|gb|EFB47382.1| lipoprotein [Staphylococcus aureus subsp. aureus C427]
gi|312438111|gb|ADQ77182.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus TCH60]
Length = 306
Score = 40.8 bits (94), Expect = 0.087, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 25/92 (27%), Gaps = 5/92 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ L + +SGC E K ++ + K E + +
Sbjct: 1 MLKKAKLILMATILLSGCSAMENESSKDTNTETKSVPEEMEAS-----KYEGQGFQPPAE 55
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ F+ L+ K
Sbjct: 56 KDAIEFAKKHKDKIAKRGEQFFMDNFGLKVKA 87
>gi|73746013|ref|YP_302605.1| outer membrane protein precursor [Sphingomonas sp. A1]
gi|72534579|dbj|BAE19699.1| Upf30.5 [Sphingomonas sp. A1]
Length = 155
Score = 40.8 bits (94), Expect = 0.087, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 37/134 (27%), Gaps = 6/134 (4%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPST 109
+ L + +S + V VSF A +L +
Sbjct: 22 AADSASMLAAGPVGMSAVSYGEPVMTAVSVSFPDSSTTFRPDA-----STAELLAEAKGA 76
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
I S S R + + S I V + + N T
Sbjct: 77 AIIYVSGRTSTLRPSAADEALALRRALSARQYLIARGVSPLKIMVNFASASDFVADNSTP 136
Query: 170 VGRQNNQRIEIQIF 183
GR NQR++I++
Sbjct: 137 EGRYQNQRVDIEVI 150
>gi|332667555|ref|YP_004450343.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332336369|gb|AEE53470.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 684
Score = 40.8 bits (94), Expect = 0.088, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 37/97 (38%), Gaps = 15/97 (15%)
Query: 92 FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+ +L ++ + K P T I + ++ + S ++ YL+ +N
Sbjct: 360 YYNVLNILGDRMGKNPGTAINLVGSSEKGPEDGRVMAES------VQRYLVNVFGINNSR 413
Query: 152 ISVRGFAYKYPIDTNDTKVG-------RQNNQRIEIQ 181
I+V G P ++ G R ++R+ I+
Sbjct: 414 INVEGR--TKPNIPSEQPGGTLELDLLRAGDRRVSIE 448
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYL---IQRGVSSNRFISVRGFAYKYPID-- 164
+ + HTD IG N +S ERA+ +K + + R ++ V G +
Sbjct: 603 TVIVHGHTDIIGDETYNQKLSMERANDVKRIMENGLSRLGRNDVKFQVYGSGEDESMSPF 662
Query: 165 TNDTKVGRQNNQRIEIQIFPRG 186
N+ R N+ + I I PR
Sbjct: 663 DNNYPEERFYNRTVIIDIVPRN 684
>gi|19352400|ref|NP_598158.1| hypothetical protein pB4p61 [uncultured bacterium]
gi|19070067|emb|CAD24383.1| Upf30.5 protein [uncultured bacterium]
Length = 147
Score = 40.8 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 29/111 (26%), Gaps = 5/111 (4%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQE 132
S A +L + I S S +
Sbjct: 37 VMTAVSVSFPDSSTTFRPDA-----STAELLAEAKGAAIIYISGRTSTLRASASDEALAL 91
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
R + + S I V + + N T GR NQR++I++
Sbjct: 92 RRALSARQYLIARGVSPLKIMVNFASASDFVADNSTPEGRYQNQRVDIEVV 142
>gi|56460551|ref|YP_155832.1| hypothetical protein IL1443 [Idiomarina loihiensis L2TR]
gi|56179561|gb|AAV82283.1| Uncharacterized conserved secreted protein [Idiomarina loihiensis
L2TR]
Length = 604
Score = 40.8 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASR-----EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
MIK+ L++ + ++GCG + E +K + +++ T+ + + + + D+
Sbjct: 1 MIKKTTLAISLSLLMAGCGQPQQAGQNAESQKSTIKQTSQTEQLKEIYNNYFDEQLQL-- 58
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI-ATILNKFPSTVIAI 113
L T I R D + + S + LE ++L ++ I A L + I
Sbjct: 59 NPLLATYIGDDRYNDQLP-NFYSEIHRTSSLQLETRYLEQVKKINAEQLPRAERISYEI 116
>gi|325478401|gb|EGC81515.1| antioxidant, AhpC/TSA family [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 231
Score = 40.8 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 26/70 (37%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M ++ ++M T++ CG E K ++ ++ DK ++ + Q+
Sbjct: 1 MKNKILIAMLFALTLTACGNTKNETKVEEKPETQQEEVKKDEVNKEEDKKDESKEADSQE 60
Query: 61 TGIVVSRIGD 70
+ D
Sbjct: 61 MKKEETESVD 70
>gi|71279635|ref|YP_269789.1| M23B family peptidase [Colwellia psychrerythraea 34H]
gi|71145375|gb|AAZ25848.1| putative peptidase, M28 family [Colwellia psychrerythraea 34H]
Length = 552
Score = 40.8 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 45/137 (32%), Gaps = 18/137 (13%)
Query: 1 MIKELGLSMFIMTTISGC-GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK++GLS+ + GC S + KV + N ++ + S E L
Sbjct: 1 MIKKIGLSLLSAAVLVGCVATTSDDSSKVNSSQGNSAQDISASYDSINTAQLIEHVKVLS 60
Query: 60 DT---GIVVSRIGDMITCYIPVHVSF-------VSEVFLEKKFLPMLQLIATILNKFPST 109
G S G+ +T + FL++ +P++ +
Sbjct: 61 SDKFGGRAPSSEGERLTLEYLTEQFTAIGFKPGNGDSFLQE--VPLV-----SIEASSDM 113
Query: 110 VIAIQSHTDSIGTLKNN 126
++I GT
Sbjct: 114 TLSIGGKNYQHGTDMVM 130
>gi|225856445|ref|YP_002737956.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae P1031]
gi|225724803|gb|ACO20655.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae P1031]
Length = 267
Score = 40.8 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + ++GC R + S+ + + + ++ E L +
Sbjct: 1 MKKLATLLLLSTVALAGCSSVQRSLRGDDYVDSSLAAEESSKVAA---QSAKELNDALTN 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ + + S+ + K P L +A
Sbjct: 58 ENANFPQLSKEVAEDEAEVILHTSQGDIRIKLFPKLAPLA 97
>gi|282908678|ref|ZP_06316497.1| lipoprotein [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282327442|gb|EFB57736.1| lipoprotein [Staphylococcus aureus subsp. aureus WW2703/97]
Length = 103
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|294789676|ref|ZP_06754909.1| putative putrescine ABC transporter/periplasmic
putrescine-binding protein [Simonsiella muelleri ATCC
29453]
gi|294482388|gb|EFG30082.1| putative putrescine ABC transporter/periplasmic
putrescine-binding protein [Simonsiella muelleri ATCC
29453]
Length = 378
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 1 MIKELGLSMFIMTTISGC-GLASREKKKVFLHKSNDTDI 38
M+K+ LS ++ ++ C G S + K SN
Sbjct: 2 MMKKTLLSTIVLLALAACGGSQSGDTAKSTSSGSNQAAT 40
>gi|225860744|ref|YP_002742253.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae Taiwan19F-14]
gi|298229134|ref|ZP_06962815.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae str. Canada MDR_19F]
gi|298255801|ref|ZP_06979387.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae str. Canada MDR_19A]
gi|298502555|ref|YP_003724495.1| peptidylprolyl isomerase [Streptococcus pneumoniae TCH8431/19A]
gi|225726587|gb|ACO22438.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae Taiwan19F-14]
gi|298238150|gb|ADI69281.1| peptidylprolyl isomerase [Streptococcus pneumoniae TCH8431/19A]
gi|301793929|emb|CBW36325.1| putative cyclophilin type peptidyl-prolyl cis-trans isomerase
[Streptococcus pneumoniae INV104]
gi|327390127|gb|EGE88470.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family
protein [Streptococcus pneumoniae GA04375]
gi|332076050|gb|EGI86516.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family
protein [Streptococcus pneumoniae GA41301]
gi|332204779|gb|EGJ18844.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family
protein [Streptococcus pneumoniae GA47901]
Length = 267
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + ++GC R + S+ + + + ++ E L +
Sbjct: 1 MKKLATLLLLSTVALAGCSSVQRSLRGDDYVDSSLAAEESSKVAA---QSAKELNDALTN 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ + + S+ + K P L +A
Sbjct: 58 ENANFPQLSKEVAEDEAEVILHTSQGDIRIKLFPKLAPLA 97
>gi|261341813|ref|ZP_05969671.1| hypothetical protein ENTCAN_08297 [Enterobacter cancerogenus ATCC
35316]
gi|288316186|gb|EFC55124.1| putative outer membrane lipoprotein [Enterobacter cancerogenus
ATCC 35316]
Length = 101
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K + +S+F++ ++GC + + + D+A + + Q+
Sbjct: 2 MMKRV-VSLFLLLMLAGCSTSQEAPVQKAQQGKISPERTLGMEQLCKDRAAHRYNAEAQN 60
Query: 61 TGIV 64
+
Sbjct: 61 IAVT 64
>gi|167763628|ref|ZP_02435755.1| hypothetical protein BACSTE_02003 [Bacteroides stercoris ATCC
43183]
gi|167698922|gb|EDS15501.1| hypothetical protein BACSTE_02003 [Bacteroides stercoris ATCC
43183]
Length = 424
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Query: 75 YIPVHVSFVSEVFLEKK-FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+P + L+ + L IA L + P I I + D G N ++ +R
Sbjct: 317 DLPAVYFERGKWKLDTDKYARELFTIAKTLKENPEIQIDICGYADHTGGEAINKKVTLKR 376
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKY 161
A+ + + + G
Sbjct: 377 AE-ALKKFLVKVGIEPERLHTYGLGKDM 403
>gi|149021635|ref|ZP_01835666.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP23-BS72]
gi|147930096|gb|EDK81082.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP23-BS72]
Length = 267
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + ++GC R + S+ + + + ++ E L +
Sbjct: 1 MKKLATLLLLSTVALAGCSSVQRSLRGDDYVDSSLAAEESSKVAA---QSAKELNDALTN 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ + + S+ + K P L +A
Sbjct: 58 ENANFPQLSKEVAEDEAEVILHTSQGDIRIKLFPKLAPLA 97
>gi|15902723|ref|NP_358273.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae R6]
gi|116516991|ref|YP_816166.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae D39]
gi|148997153|ref|ZP_01824807.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP11-BS70]
gi|149007651|ref|ZP_01831268.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP18-BS74]
gi|168575430|ref|ZP_02721366.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pneumoniae
MLV-016]
gi|194398488|ref|YP_002037417.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae G54]
gi|307067375|ref|YP_003876341.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Streptococcus pneumoniae AP200]
gi|15458267|gb|AAK99483.1| Peptidyl-prolyl cis-trans isomerase [Streptococcus pneumoniae R6]
gi|116077567|gb|ABJ55287.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae D39]
gi|147756853|gb|EDK63893.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP11-BS70]
gi|147760806|gb|EDK67777.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP18-BS74]
gi|183578460|gb|EDT98988.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pneumoniae
MLV-016]
gi|194358155|gb|ACF56603.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae G54]
gi|306408912|gb|ADM84339.1| Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Streptococcus pneumoniae AP200]
gi|332077185|gb|EGI87647.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family
protein [Streptococcus pneumoniae GA17545]
gi|332202634|gb|EGJ16703.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family
protein [Streptococcus pneumoniae GA41317]
Length = 267
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + ++GC R + S+ + + + ++ E L +
Sbjct: 1 MKKLATLLLLSTVALAGCSSVQRSLRGDDYVDSSLAAEESSKVAA---QSAKELNDALTN 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ + + S+ + K P L +A
Sbjct: 58 ENANFPQLSKEVAEDEAEVILHTSQGDIRIKLFPKLAPLA 97
>gi|315126864|ref|YP_004068867.1| M48 family peptidase [Pseudoalteromonas sp. SM9913]
gi|315015378|gb|ADT68716.1| M48 family peptidase [Pseudoalteromonas sp. SM9913]
Length = 265
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 7/51 (13%), Positives = 21/51 (41%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
+K+L L + ++GC + + ++ L+ + + + K +
Sbjct: 1 MKKLVLVVLASAVLAGCKTSPTGRTQIALYSDQQMTQMGTASFAEMKKTQP 51
>gi|148992434|ref|ZP_01822129.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP9-BS68]
gi|168488440|ref|ZP_02712639.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP195]
gi|225858579|ref|YP_002740089.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae 70585]
gi|147928751|gb|EDK79764.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP9-BS68]
gi|183573027|gb|EDT93555.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP195]
gi|225720169|gb|ACO16023.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae 70585]
gi|332073105|gb|EGI83584.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family
protein [Streptococcus pneumoniae GA17570]
Length = 267
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + ++GC R + S+ + + + ++ E L +
Sbjct: 1 MKKLATLLLLSTVALAGCSSVQRSLRGDDYVDSSLAAEESSKVAA---QSAKELNDALTN 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ + + S+ + K P L +A
Sbjct: 58 ENANFPQLSKEVAEDEAEVILHTSQGDIRIKLFPKLAPLA 97
>gi|149003390|ref|ZP_01828279.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP14-BS69]
gi|149010603|ref|ZP_01831974.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP19-BS75]
gi|168490858|ref|ZP_02715001.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae CDC0288-04]
gi|168492921|ref|ZP_02717064.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae CDC3059-06]
gi|182683690|ref|YP_001835437.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae CGSP14]
gi|221231566|ref|YP_002510718.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Streptococcus
pneumoniae ATCC 700669]
gi|225854278|ref|YP_002735790.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae JJA]
gi|237650458|ref|ZP_04524710.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae CCRI 1974]
gi|237821912|ref|ZP_04597757.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae CCRI 1974M2]
gi|303255816|ref|ZP_07341857.1| putative cyclophilin type peptidyl-prolyl cis-trans isomerase
[Streptococcus pneumoniae BS455]
gi|303260235|ref|ZP_07346206.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP-BS293]
gi|303261442|ref|ZP_07347390.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP14-BS292]
gi|303264109|ref|ZP_07350030.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae BS397]
gi|303266280|ref|ZP_07352171.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae BS457]
gi|303268719|ref|ZP_07354509.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae BS458]
gi|307127680|ref|YP_003879711.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae 670-6B]
gi|147758573|gb|EDK65571.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP14-BS69]
gi|147765084|gb|EDK72013.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP19-BS75]
gi|182629024|gb|ACB89972.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae CGSP14]
gi|183574565|gb|EDT95093.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae CDC0288-04]
gi|183577132|gb|EDT97660.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae CDC3059-06]
gi|220674026|emb|CAR68539.1| putative cyclophilin type peptidyl-prolyl cis-trans isomerase
[Streptococcus pneumoniae ATCC 700669]
gi|225723521|gb|ACO19374.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae JJA]
gi|301801616|emb|CBW34314.1| putative cyclophilin type peptidyl-prolyl cis-trans isomerase
[Streptococcus pneumoniae INV200]
gi|302597200|gb|EFL64305.1| putative cyclophilin type peptidyl-prolyl cis-trans isomerase
[Streptococcus pneumoniae BS455]
gi|302637576|gb|EFL68063.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP14-BS292]
gi|302638559|gb|EFL69023.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP-BS293]
gi|302641779|gb|EFL72136.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae BS458]
gi|302644210|gb|EFL74466.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae BS457]
gi|302646514|gb|EFL76740.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae BS397]
gi|306484742|gb|ADM91611.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae 670-6B]
Length = 267
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + ++GC R + S+ + + + ++ E L +
Sbjct: 1 MKKLATLLLLSTVALAGCSSVQRSLRGDDYVDSSLAAEESSKVAA---QSAKELNDALTN 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ + + S+ + K P L +A
Sbjct: 58 ENANFPQLSKEVAEDEAEVILHTSQGDIRIKLFPKLAPLA 97
>gi|329733799|gb|EGG70124.1| putative lipoprotein [Staphylococcus aureus subsp. aureus 21193]
Length = 210
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|310639828|ref|YP_003944586.1| abc superfamily ATP binding cassette transporter,
substrate-binding protein [Paenibacillus polymyxa SC2]
gi|309244778|gb|ADO54345.1| ABC superfamily ATP binding cassette transporter,
substrate-binding protein [Paenibacillus polymyxa SC2]
Length = 438
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 5/71 (7%)
Query: 1 MIKE---LGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M+K + L+ + + ++GC K K+ T G L + +F+
Sbjct: 22 MMKRTLGIILASTLLLGGALAGCSSKDDSSGKDANGKTTITMWGMGAEGKLLPEIVKDFE 81
Query: 56 MQLQDTGIVVS 66
+ D + V
Sbjct: 82 KENPDIHVDVQ 92
>gi|226314401|ref|YP_002774297.1| hypothetical protein BBR47_48160 [Brevibacillus brevis NBRC
100599]
gi|226097351|dbj|BAH45793.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 310
Score = 40.8 bits (94), Expect = 0.096, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 20/61 (32%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K+L + + M +GC + ++ D +LD ++ +
Sbjct: 10 KKLSMVVVAMLVFAGCATQQTAQPTSTASEAKDKTASGASGAINLDSYTPPSMDKVPEGP 69
Query: 63 I 63
+
Sbjct: 70 L 70
>gi|295133502|ref|YP_003584178.1| hypothetical protein ZPR_1647 [Zunongwangia profunda SM-A87]
gi|294981517|gb|ADF51982.1| conserved hypothetical protein [Zunongwangia profunda SM-A87]
Length = 282
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 34/105 (32%), Gaps = 5/105 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE-FQMQLQD 60
+K+L S+ + ++ C + K + +++ E+ ++
Sbjct: 15 MKKLIFSLATIAALTAC----KNNKSDAEPGEMIPAEESTALNDDMNEQEEANINIEPVS 70
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
V D + PV + + + F+ + + +N
Sbjct: 71 HATAVINWDDAVFYTDPVGGAELFTEMDKPNFILITDIHGDHMNA 115
>gi|223983647|ref|ZP_03633823.1| hypothetical protein HOLDEFILI_01104 [Holdemania filiformis DSM
12042]
gi|223964344|gb|EEF68680.1| hypothetical protein HOLDEFILI_01104 [Holdemania filiformis DSM
12042]
Length = 194
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 8/87 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ + + ++GC L ++ + + + + E
Sbjct: 1 MKKIIIVLAC-FLLTGCALQETKEPTENPPATAPAESTPEASAEASPTPSPETIQ--LAE 57
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFL 88
G+ + + F +V L
Sbjct: 58 GVNAEKQDGKLIISA-----FNGDVTL 79
>gi|7228696|gb|AAF42582.1|AF226433_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
gi|308390214|gb|ADO32534.1| transferrin-binding protein-related protein [Neisseria
meningitidis alpha710]
Length = 425
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 21/70 (30%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + D ED Q Q
Sbjct: 1 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTPSKPAAPVVAEKETDAKEDAPQAGSQG 60
Query: 61 TGIVVSRIGD 70
G ++ G
Sbjct: 61 QGAPSAQGGQ 70
>gi|124008124|ref|ZP_01692822.1| leucine-rich repeat containing protein, putative [Microscilla
marina ATCC 23134]
gi|123986372|gb|EAY26185.1| leucine-rich repeat containing protein, putative [Microscilla
marina ATCC 23134]
Length = 319
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 12/114 (10%), Positives = 43/114 (37%), Gaps = 4/114 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L ++ ++ ++ CG +K + + ++ + VN ++ +K ++ D
Sbjct: 1 MKKLLIAFAMVGFLAACG--GNKKGENTENSADTSASVNTDSANTDNKTDETTSTNTADA 58
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVF--LEKKFLPMLQLIATILNKFPSTVIAI 113
+ +G V+ ++ + + + L + + + +
Sbjct: 59 PLSKDLVGKAKEYGSEEEVTAETDKSKIIRYRSKNYAKEFPKALFEAKNLQVLV 112
>gi|325697435|gb|EGD39321.1| lipoprotein [Streptococcus sanguinis SK160]
gi|327462768|gb|EGF09090.1| lipoprotein [Streptococcus sanguinis SK1057]
gi|327468386|gb|EGF13871.1| lipoprotein [Streptococcus sanguinis SK330]
Length = 180
Score = 40.8 bits (94), Expect = 0.100, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 38/103 (36%), Gaps = 7/103 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L+ + T++ C S+ K++ K + + K + ++ ++
Sbjct: 1 MKKILLASICLLTLTACSTTSQNKQENT-PKQSQSQSKTKEEKTQTKTFSNKIDEYYTNS 59
Query: 62 GIVVSRIGDMITCY------IPVHVSFVSEVFLEKKFLPMLQL 98
+ +++ IP +S L K + L+
Sbjct: 60 VKLFYTKDKILSFQLISSQAIPEENQKMSVEELTKSYREDLKK 102
>gi|319399953|gb|EFV88195.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
Length = 285
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 36/119 (30%), Gaps = 13/119 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ- 59
M K L LS+ ++GC + K ++ T NK K E++ + Q
Sbjct: 1 MKKILVLSLTAFLVLAGCNSGDKTDTKDKKEETKQTSKANKENKEQHHKQENDNKASTQL 60
Query: 60 -----------DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
G+ + +E +K+ ++ A + P
Sbjct: 61 SEKERLALAFYADGVEKYMLTKNEVLTGVYDYQKGNETE-KKQMEQLMLEKADSMKNAP 118
>gi|311294129|gb|ADP88820.1| outer membrane protein [Vibrio parahaemolyticus]
gi|311294135|gb|ADP88823.1| outer membrane protein [Vibrio parahaemolyticus]
Length = 182
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 64/184 (34%), Gaps = 10/184 (5%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV------NKRFGSSLDKAEDEFQMQL 58
+ ++ C S + KS+DT I L +DE ++
Sbjct: 3 FAIIFTSNVALANCINQSENYVTSKVLKSSDTKITQVDGKLASVINEDLSIVQDEKIEKV 62
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ T S D + + V +E L + ++N+ I ++ HTD
Sbjct: 63 EATNATESCTFDKNSMSL-VLHYDTNEHHLTNVHKQAISKYLELVNE--DKRILVEGHTD 119
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRI 178
+G+ N +S RA YL + NR + + F PI + N+R+
Sbjct: 120 DVGSQAYNKSLSLRRASTASKYLKKDLGLGNRIVE-KAFGESAPICKVNENKLSGCNRRV 178
Query: 179 EIQI 182
+ I
Sbjct: 179 VLTI 182
>gi|206577872|ref|YP_002240087.1| putative lipoprotein [Klebsiella pneumoniae 342]
gi|288936837|ref|YP_003440896.1| Uncharacterized lipoprotein [Klebsiella variicola At-22]
gi|206566930|gb|ACI08706.1| putative lipoprotein [Klebsiella pneumoniae 342]
gi|288891546|gb|ADC59864.1| Uncharacterized lipoprotein [Klebsiella variicola At-22]
Length = 192
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + M ++GC + D S++ A+ L
Sbjct: 1 MLKKILFPLVAMFMLAGCATPPTTIEVSPKITLPQQDPSLMGVTVSINGADQRPDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R +T + F
Sbjct: 60 ---KVTRDNQQVTLTASRDLRF 78
>gi|150377492|ref|YP_001314087.1| conjugal transfer protein H [Sinorhizobium medicae WSM419]
gi|150032039|gb|ABR64154.1| conjugal transfer protein H [Sinorhizobium medicae WSM419]
Length = 146
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 8/79 (10%), Positives = 25/79 (31%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++ L ++ +SGC A + + + + G + + ++ T
Sbjct: 1 MQNLLSTVIAAALLSGCQTADQGLRPSSDAGAVTGPAASAIAGDMVSRLAEQIGPATATT 60
Query: 62 GIVVSRIGDMITCYIPVHV 80
I + + + +
Sbjct: 61 TIRMDKDTSEFAIALEAAL 79
>gi|282921333|ref|ZP_06329051.1| peptide/nickel transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus C427]
gi|282315748|gb|EFB46132.1| peptide/nickel transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus C427]
Length = 517
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 43/122 (35%), Gaps = 16/122 (13%)
Query: 1 MIKE--LGLSMFIMTTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAED--- 52
M K + ++ ++GCG +E K + + ++ + + + +++
Sbjct: 1 MKKRVLITMAASATFLLAGCGNDQKEDKNITVSLPTEAKADKLDAQGYDAAMPVYSAVYD 60
Query: 53 EFQMQLQDTGIV--------VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+D G+ V G + ++ +V F L+ K + A +N
Sbjct: 61 SLVKYDKDKGVKAGLAEKWHVDDSGKVYDFHLKKNVKFSDGSALDAKAVKFSIERAKAMN 120
Query: 105 KF 106
K
Sbjct: 121 KD 122
>gi|258420312|ref|ZP_05683258.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257843699|gb|EEV68102.1| conserved hypothetical protein [Staphylococcus aureus A9719]
Length = 139
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 24/92 (26%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
++G+ F L+ K
Sbjct: 61 HRKEFEKVGEQ---------FFKDNFGLKVKA 83
>gi|253569743|ref|ZP_04847152.1| outer membrane protein [Bacteroides sp. 1_1_6]
gi|251840124|gb|EES68206.1| outer membrane protein [Bacteroides sp. 1_1_6]
Length = 363
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Query: 40 NKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ ++ + Q + ++ ++ L+K + +
Sbjct: 225 TAPVYYEPEPVVEQPKPQPVVKQPEPEPVAVVVEPMKQNIFFALNSALLQKDQQSKIDAM 284
Query: 100 ATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+ K+P++ +AI + D G + N+ +S++RA ++ L +G++++R ++
Sbjct: 285 VAYMEKYPASKVAITGYADKETGNPRINMTLSEKRAKIVADALKAKGIAADRIVT 339
>gi|312868322|ref|ZP_07728522.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus parasanguinis F0405]
gi|311096067|gb|EFQ54311.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus parasanguinis F0405]
Length = 287
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 25/92 (27%), Gaps = 4/92 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK---AEDEFQMQ 57
M K + L +F ++ C + K K E + Q
Sbjct: 7 MKKLIALLLFSGLALTACSSNKTDANSSSSSKEKTEQTATSSSSEKDQKKIEQEQKKLEQ 66
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
L+ + + + V+ E ++
Sbjct: 67 LRKDFNDAMTNENAVFPQLSNEVA-EDEAEVK 97
>gi|266619677|ref|ZP_06112612.1| putative bacterial extracellular solute-binding protein
[Clostridium hathewayi DSM 13479]
gi|288868775|gb|EFD01074.1| putative bacterial extracellular solute-binding protein
[Clostridium hathewayi DSM 13479]
Length = 462
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 12/143 (8%), Positives = 36/143 (25%), Gaps = 21/143 (14%)
Query: 2 IKELGLSMFIM-----TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+K+ + +SGCG S ++ + + + K E+
Sbjct: 1 MKKTLAVVLSAVMVSGLALSGCGGNSASATTAAPKETTTAEPAETKKEET--KGEEAKGE 58
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ ++ + + +L + P + Q+
Sbjct: 59 APAGEQVTITISNWLEAEEATSAIF-----------KELLD---DFMAANPDIRVESQAI 104
Query: 117 TDSIGTLKNNLLISQERADVIKS 139
+ + + + A +
Sbjct: 105 PFNQYKDQVLIAGTSGNAADVIM 127
>gi|325068013|ref|ZP_08126686.1| OmpA/MotB domain protein [Actinomyces oris K20]
Length = 336
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-TV 110
+ + L D+ ++ + L L+ +A L ++P
Sbjct: 249 ERYTQALDDSTSTLADNQKVTVTLASDVTFASDSADLAPAADAQLKTVAGQLAQYPDGGT 308
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVI 137
++I HTD + N +S++RA+ +
Sbjct: 309 LSIVGHTDDVQDDAYNQTLSEKRANAV 335
>gi|229095010|ref|ZP_04226006.1| CamS sex pheromone cAM373 [Bacillus cereus Rock3-29]
gi|229101111|ref|ZP_04231877.1| CamS sex pheromone cAM373 [Bacillus cereus Rock3-28]
gi|228682239|gb|EEL36350.1| CamS sex pheromone cAM373 [Bacillus cereus Rock3-28]
gi|228688340|gb|EEL42222.1| CamS sex pheromone cAM373 [Bacillus cereus Rock3-29]
Length = 398
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 32/112 (28%), Gaps = 17/112 (15%)
Query: 2 IKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K++ L++ + +SGC + + +KV + + D+
Sbjct: 1 MKKIALAVLSLGLLVSGCSAGADKDEKVAEKSGKAKEQAVVPKYAISDEYYKTTVPFDAG 60
Query: 61 TGIVVSRIGDMITCYIPV----------------HVSFVSEVFLEKKFLPML 96
+ + G I F L+ + + ML
Sbjct: 61 SARGLVVQGLNNRLDIDEFETGLMRIAKESFNTKDYFFKGGSTLDDQTVKML 112
>gi|229113963|ref|ZP_04243389.1| CamS sex pheromone cAM373 [Bacillus cereus Rock1-3]
gi|228669422|gb|EEL24838.1| CamS sex pheromone cAM373 [Bacillus cereus Rock1-3]
Length = 398
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 32/112 (28%), Gaps = 17/112 (15%)
Query: 2 IKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K++ L++ + +SGC + + +KV + + D+
Sbjct: 1 MKKIALAVLSLGLLVSGCSAGADKDEKVAEKSGKAKEQAVVPKYAISDEYYKTTVPFDAG 60
Query: 61 TGIVVSRIGDMITCYIPV----------------HVSFVSEVFLEKKFLPML 96
+ + G I F L+ + + ML
Sbjct: 61 SARGLVVQGLNNRLDIDEFETGLMRIAKESFNTKDYFFKGGSTLDDQTVKML 112
>gi|218234967|ref|YP_002365651.1| putative lipoprotein [Bacillus cereus B4264]
gi|218162924|gb|ACK62916.1| putative lipoprotein [Bacillus cereus B4264]
Length = 198
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 41/109 (37%), Gaps = 3/109 (2%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDI-VNKRFGSSLDKAEDEFQMQ 57
M K + L + + +S C +++ K++ + D I V + SS K E + +
Sbjct: 1 MKKYILYPLMLLTILFLSACSNSAQPKEENDVQSIKDVAIKVPENIFSSSKKNETINEDE 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ + I S +S+ + + LQ + + +
Sbjct: 61 MKQNIKTYLDYSGELYENIVPLSSAMSDEKVTESDRDKLQKLIDLAQQN 109
>gi|57865812|ref|YP_189962.1| lipoprotein [Staphylococcus epidermidis RP62A]
gi|57636470|gb|AAW53258.1| lipoprotein, putative [Staphylococcus epidermidis RP62A]
Length = 285
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 36/119 (30%), Gaps = 13/119 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ- 59
M K L LS+ ++GC + K ++ T NK K E++ + Q
Sbjct: 1 MKKILVLSLTAFLVLAGCNSGDKTDTKDKKEETKQTSKANKENKEQHHKQENDNKASTQL 60
Query: 60 -----------DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
G+ + +E +K+ ++ A + P
Sbjct: 61 SEKERLALAFYADGVEKYMLTKNEVLTGVYDYQKGNETE-KKQMEQLMLEKADSMKNAP 118
>gi|290510107|ref|ZP_06549477.1| lipoprotein [Klebsiella sp. 1_1_55]
gi|289776823|gb|EFD84821.1| lipoprotein [Klebsiella sp. 1_1_55]
Length = 194
Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + M ++GC + D S++ A+ L
Sbjct: 3 MLKKILFPLVAMFMLAGCATPPTTIEVSPKITLPQQDPSLMGVTVSINGADQRPDQALA- 61
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R +T + F
Sbjct: 62 ---KVTRDNQQVTLTASRDLRF 80
>gi|218666506|ref|YP_002424926.1| competence lipoprotein ComL, putative [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|218518719|gb|ACK79305.1| competence lipoprotein ComL, putative [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 251
Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 6/37 (16%), Positives = 12/37 (32%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD 37
M K + +S+ I+GC + +
Sbjct: 1 MSKRILMSLCCAALIAGCASTPNNPDNSAVSHESARA 37
>gi|213582299|ref|ZP_03364125.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 78
Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 10/67 (14%)
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNN 175
N +S++RA + YLI + + IS RG P+ N +
Sbjct: 1 YNQGLSEKRAQSVVDYLISK-GIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPD 59
Query: 176 QRIEIQI 182
+R+EI++
Sbjct: 60 RRVEIEV 66
>gi|198282732|ref|YP_002219053.1| outer membrane assembly lipoprotein YfiO [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|198247253|gb|ACH82846.1| outer membrane assembly lipoprotein YfiO [Acidithiobacillus
ferrooxidans ATCC 53993]
Length = 261
Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 6/37 (16%), Positives = 12/37 (32%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD 37
M K + +S+ I+GC + +
Sbjct: 11 MSKRILMSLCCAALIAGCASTPNNPDNSAVSHESARA 47
>gi|317492276|ref|ZP_07950705.1| hypothetical protein HMPREF0864_01469 [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316919615|gb|EFV40945.1| hypothetical protein HMPREF0864_01469 [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 200
Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 7/40 (17%), Positives = 17/40 (42%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN 40
M+K+L F ++GC + +++ + + T
Sbjct: 1 MMKKLLSVTFAALLLAGCQITTKQGSETTTEPAQPTQTQP 40
>gi|310641204|ref|YP_003945962.1| abc-type phosphate transport system, permease component
[Paenibacillus polymyxa SC2]
gi|309246154|gb|ADO55721.1| ABC-type phosphate transport system, permease component
[Paenibacillus polymyxa SC2]
Length = 307
Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 13/121 (10%), Positives = 34/121 (28%), Gaps = 15/121 (12%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ + +++ ++ ++ CG + + D + G+ L Q
Sbjct: 1 MLKKWPFILMTLTMVFALAACGSGNNAAPQGDAAAGTDNKAAAELTGNILAVGSTALQPL 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV---------SEVFLEKK---FLPMLQLIATILNK 105
++ G + + V + + L+ A L
Sbjct: 61 VEQAGQKFMAVDKYKGIAVQVQGGGSGTGLTQVSGGQADIGNSDVFAKEKLESGAEELVD 120
Query: 106 F 106
Sbjct: 121 H 121
>gi|282600587|ref|ZP_05979136.2| putative protein PsiD [Subdoligranulum variabile DSM 15176]
gi|282571848|gb|EFB77383.1| putative protein PsiD [Subdoligranulum variabile DSM 15176]
Length = 1103
Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 24/63 (38%), Gaps = 6/63 (9%)
Query: 1 MIKEL---GLSMFIMTTISGCGLAS---REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
M+K L ++ + ++GCG+ + ++ ++ ++ ++ + A
Sbjct: 11 MMKHLLQRMTALLLAGVLAGCGMTAAALATPEQAATPEAAVPELSPAPETATPENAAPTL 70
Query: 55 QMQ 57
Sbjct: 71 LQA 73
>gi|299536998|ref|ZP_07050303.1| superoxide dismutase [Cu-Zn] 2 precursor [Lysinibacillus
fusiformis ZC1]
gi|298727578|gb|EFI68148.1| superoxide dismutase [Cu-Zn] 2 precursor [Lysinibacillus
fusiformis ZC1]
Length = 183
Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 30/61 (49%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K +S+ ++ ++GC ++++KV ++ S+ K G++ + + + + +
Sbjct: 1 MKKISLMSLSLLIFVAGCSFFDKKEEKVAVNASSPLTATAKVIGANNESYGNAYLQEEDN 60
Query: 61 T 61
Sbjct: 61 G 61
>gi|323691786|ref|ZP_08106043.1| extracellular solute-binding protein family 5 [Clostridium
symbiosum WAL-14673]
gi|323504152|gb|EGB19957.1| extracellular solute-binding protein family 5 [Clostridium
symbiosum WAL-14673]
Length = 567
Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 6/85 (7%)
Query: 1 MIKELGLSMFIMTT----ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K++ L + + +SGCG S + T+ + +A D
Sbjct: 1 MKKKVSLLLALGLVCTTVLSGCGGGST-PTEPQTIADATTEAAGSEASTEGAEAADTLAD 59
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVS 81
+Q+ V++ D I I +
Sbjct: 60 -VQEMTFVLNNEPDGIDPTITNNSF 83
>gi|254460712|ref|ZP_05074128.1| hypothetical protein RB2083_1303 [Rhodobacterales bacterium
HTCC2083]
gi|206677301|gb|EDZ41788.1| hypothetical protein RB2083_1303 [Rhodobacteraceae bacterium
HTCC2083]
Length = 44
Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 13/35 (37%)
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+ IS G+ P+ N T+ R N+
Sbjct: 1 MIARGVPREAISPVGYGPSKPLADNATEASRAANR 35
>gi|163815832|ref|ZP_02207202.1| hypothetical protein COPEUT_02011 [Coprococcus eutactus ATCC
27759]
gi|158448642|gb|EDP25637.1| hypothetical protein COPEUT_02011 [Coprococcus eutactus ATCC
27759]
Length = 409
Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 8/93 (8%)
Query: 2 IKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+ L L + +++ CG +K D ++ + DK L
Sbjct: 1 MKKVKLLALMLAASISLTACGTDGGTEKAGVFAGVKTADRISTNKYYTTDKVRVRGIANL 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ GD IP S +E+
Sbjct: 61 VNEMDYEEIEGD-----IPDVFFENSNEEIEED 88
>gi|225568946|ref|ZP_03777971.1| hypothetical protein CLOHYLEM_05025 [Clostridium hylemonae DSM
15053]
gi|225162445|gb|EEG75064.1| hypothetical protein CLOHYLEM_05025 [Clostridium hylemonae DSM
15053]
Length = 433
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 11/95 (11%), Positives = 35/95 (36%), Gaps = 4/95 (4%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ L +++ ++ +++ CG S + K + ++ ++ ++E +
Sbjct: 1 MMKKTVALFMTVLMVFSLAACGSGS-DGKGDSKKEEDEKGGDSEVVLEFQQWFDNEMEEG 59
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ I + + ++ LE
Sbjct: 60 YLQSICDDFYEETGIKIKLLSNPYADTKTQLEASA 94
>gi|315650801|ref|ZP_07903849.1| hypothetical protein HMPREF0381_0843 [Eubacterium saburreum DSM
3986]
gi|315486942|gb|EFU77276.1| hypothetical protein HMPREF0381_0843 [Eubacterium saburreum DSM
3986]
Length = 193
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 15/61 (24%), Gaps = 1/61 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L + IS C + + D DK Q D
Sbjct: 1 MKKIIFLIIASALLISACSSV-KNTVDSAKSEITKNDKQPPEEKEYKDKVIAALDNQNAD 59
Query: 61 T 61
Sbjct: 60 E 60
>gi|325680629|ref|ZP_08160171.1| glycosyl hydrolase family 10 [Ruminococcus albus 8]
gi|324107699|gb|EGC01973.1| glycosyl hydrolase family 10 [Ruminococcus albus 8]
Length = 390
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI 38
M K L + ++GCG + + K +T
Sbjct: 1 MKKTLAFILSAALLLTGCGSSKTDDKTESAASKAETAS 38
>gi|290243131|ref|YP_003494801.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288945636|gb|ADC73334.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 611
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 30/119 (25%), Gaps = 4/119 (3%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
VS D LE + L+ IA L FP + G
Sbjct: 485 VSIGEDEELVETTAAYFRSGSDQLEGQSARHLEQIARSLQDFPEYRAVVVG-YGDPGVDS 543
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+ ++ S + + P + ++R+++ +
Sbjct: 544 AVAMELGAARGAAARDVVTDAGVSAQRVETE---SAAPPAQCRSGEVEGRDRRVDVWLI 599
>gi|324327430|gb|ADY22690.1| putative lipoprotein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 303
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 48/169 (28%), Gaps = 21/169 (12%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K + + + + +SGCG + + G +A+ E Q + +
Sbjct: 6 KGILVGVLCVAVVSGCGTKVSD------------VALVSDIGGHTVEAKAEVQDSI--SL 51
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ ++ + F E KF ++ +A + K +
Sbjct: 52 VDGRTGTEVKKLDLSSLGYFEDEA----KFKKSVEKVAREVGKNVDKKMVPSRLGPDGSW 107
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +++ L S+ + + K P T G
Sbjct: 108 QEGKPSYELMEKELVNKLLNVGMWDSSYQLPIV---EKKPTATLSDAQG 153
>gi|227499909|ref|ZP_03930002.1| possible thiamine biosynthesis lipoprotein [Anaerococcus tetradius
ATCC 35098]
gi|227218018|gb|EEI83291.1| possible thiamine biosynthesis lipoprotein [Anaerococcus tetradius
ATCC 35098]
Length = 389
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 15/108 (13%), Positives = 42/108 (38%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ + + ++ C S++K+ KSN + + DK+++ D
Sbjct: 3 LKKIFYPLAMAFLLAACANGSKDKETKEEVKSNQVSQAEDQKDAEDDKSDENEIDVDLDD 62
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ ++ Y + ++ +K F +L+ L+++
Sbjct: 63 SEELPKLDKTYYEYFDTVTTILTYSKDKKSFDKHCKLLEKELDRYNKL 110
>gi|291458298|ref|ZP_06597688.1| putative periplasmic protein [Oribacterium sp. oral taxon 078
str. F0262]
gi|291418831|gb|EFE92550.1| putative periplasmic protein [Oribacterium sp. oral taxon 078
str. F0262]
Length = 307
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 4/93 (4%)
Query: 1 MIKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTD--IVNKRFGSSLDKAEDEFQM 56
M K ++ + +SGCG + K ++ + G+ ++K E +
Sbjct: 1 MKKRTVFALACMLALFVSGCGGKKADAKSAETTALTESAETTLTAGSGAEIEKQEKGEKP 60
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
Q T D + + +L+
Sbjct: 61 AFQITPFQAVDKEDYGVKIVNYGNVGEDQEYLQ 93
>gi|194098649|ref|YP_002001711.1| Yag [Neisseria gonorrhoeae NCCP11945]
gi|240080686|ref|ZP_04725229.1| Yag [Neisseria gonorrhoeae FA19]
gi|240112948|ref|ZP_04727438.1| Yag [Neisseria gonorrhoeae MS11]
gi|240115702|ref|ZP_04729764.1| Yag [Neisseria gonorrhoeae PID18]
gi|240117998|ref|ZP_04732060.1| Yag [Neisseria gonorrhoeae PID1]
gi|240123552|ref|ZP_04736508.1| Yag [Neisseria gonorrhoeae PID332]
gi|260440485|ref|ZP_05794301.1| Yag [Neisseria gonorrhoeae DGI2]
gi|268599025|ref|ZP_06133192.1| predicted protein [Neisseria gonorrhoeae MS11]
gi|268601377|ref|ZP_06135544.1| predicted protein [Neisseria gonorrhoeae PID18]
gi|268603706|ref|ZP_06137873.1| predicted protein [Neisseria gonorrhoeae PID1]
gi|268682177|ref|ZP_06149039.1| predicted protein [Neisseria gonorrhoeae PID332]
gi|291043789|ref|ZP_06569505.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|193933939|gb|ACF29763.1| Yag [Neisseria gonorrhoeae NCCP11945]
gi|268583156|gb|EEZ47832.1| predicted protein [Neisseria gonorrhoeae MS11]
gi|268585508|gb|EEZ50184.1| predicted protein [Neisseria gonorrhoeae PID18]
gi|268587837|gb|EEZ52513.1| predicted protein [Neisseria gonorrhoeae PID1]
gi|268622461|gb|EEZ54861.1| predicted protein [Neisseria gonorrhoeae PID332]
gi|291012252|gb|EFE04241.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
Length = 173
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/171 (9%), Positives = 52/171 (30%), Gaps = 12/171 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHK--SNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
IK L + ++ C +E + + + + + + ++ + L
Sbjct: 4 IKNT-LFVASAMILTACAAPKQEVAGLPQDATYTVEQNQLGEFVFCRNEECSGFERKVLA 62
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + ++ I + L + + L+ + L + + ++ DS
Sbjct: 63 EQPVYAQTQTNLQKDEIR-VFFNLGSSHLGAEGVRTLKRVLPKLK--NTQTVYLRGWADS 119
Query: 120 IGTLKNNLLIS-QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
IG + ++ + +++ S + + P N
Sbjct: 120 IGGRNTAINRRLAKQRAAVIGKWLRKHNVSAKIRTASS-----PACCNSDD 165
>gi|163816158|ref|ZP_02207526.1| hypothetical protein COPEUT_02342 [Coprococcus eutactus ATCC 27759]
gi|158448578|gb|EDP25573.1| hypothetical protein COPEUT_02342 [Coprococcus eutactus ATCC 27759]
Length = 335
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 20/149 (13%), Positives = 38/149 (25%), Gaps = 9/149 (6%)
Query: 1 MIKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K + + I ++GCG S K DK ++
Sbjct: 13 MKKGFLCGAMGITIAAMLAGCGGGSDADKNTGDSGKTGYSQDAADVNDDSDKDANDTGSV 72
Query: 58 LQDT-GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
D+ G V R + + L L + L +P + I+
Sbjct: 73 ADDSMGAGVLRYD----MTDKDVLDAPTGATLFAD-KLTLPIKIDDLMDYPLDGVGIEGI 127
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRG 145
+ S + ++ +
Sbjct: 128 NTLSSLIDTYTESSNNFSFIVYDKTGENM 156
>gi|119469576|ref|ZP_01612480.1| hypothetical protein ATW7_06953 [Alteromonadales bacterium TW-7]
gi|119447111|gb|EAW28381.1| hypothetical protein ATW7_06953 [Alteromonadales bacterium TW-7]
Length = 265
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L L++ ++GC + + ++ L+ + + + K ++ + T
Sbjct: 1 MKKLVLALVATAVLAGCKTSPTGRTQIALYSDQQMSEMGTASFADMKK--NQPINKNPKT 58
Query: 62 GIVVSRIGDMITCYIPVHVSFVS 84
V+ I + + +P + +
Sbjct: 59 NTYVNCIAEKVIAVLPNEYASQN 81
>gi|323692338|ref|ZP_08106576.1| extracellular solute-binding protein family 5 [Clostridium
symbiosum WAL-14673]
gi|323503607|gb|EGB19431.1| extracellular solute-binding protein family 5 [Clostridium
symbiosum WAL-14673]
Length = 571
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 29/93 (31%), Gaps = 13/93 (13%)
Query: 1 MIKELGLSMFIMT----TISGCGLASREKKKVFLHKSNDTDIVNKR---------FGSSL 47
M K++ L + ++GCG S+ + + T + G
Sbjct: 1 MKKKVALLVAAAMLSTTVLAGCGGGSKGTDESKGSEQGTTTAAGETAGGLDLAVQIGPDP 60
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ + + +++ ++T +V
Sbjct: 61 ETLDPALNSAIDGANMIIHGFETLLTFDEENNV 93
>gi|323487183|ref|ZP_08092487.1| oligopeptide ABC transporter [Clostridium symbiosum WAL-14163]
gi|323399495|gb|EGA91889.1| oligopeptide ABC transporter [Clostridium symbiosum WAL-14163]
Length = 571
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 29/93 (31%), Gaps = 13/93 (13%)
Query: 1 MIKELGLSMFIMT----TISGCGLASREKKKVFLHKSNDTDIVNKR---------FGSSL 47
M K++ L + ++GCG S+ + + T + G
Sbjct: 1 MKKKVALLVAAAMLSTTVLAGCGGGSKGTDESKGSEQGTTTAAGETAGGLDLAVQIGPDP 60
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ + + +++ ++T +V
Sbjct: 61 ETLDPALNSAIDGANMIIHGFETLLTFDEENNV 93
>gi|213865487|ref|ZP_03387606.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 233
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 163 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 222
Query: 135 DVIKSYLIQR 144
+ YLI +
Sbjct: 223 QSVVDYLISK 232
>gi|160880139|ref|YP_001559107.1| extracellular solute-binding protein [Clostridium phytofermentans
ISDg]
gi|160428805|gb|ABX42368.1| extracellular solute-binding protein family 5 [Clostridium
phytofermentans ISDg]
Length = 550
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 16/128 (12%), Positives = 39/128 (30%), Gaps = 8/128 (6%)
Query: 1 MIKELGLSMFIMTTI--SGCGLAS----REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
M K L LSM ++ + S CG E+ K + + + G + + +
Sbjct: 1 MKKRLILSMCLVIALTVSACGSKDVGNNNEQTKAPVKTETSGKDLKVQLGPNPETLDPAL 60
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVS--FVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ +++ ++ ++ + + + L + L V+
Sbjct: 61 NSAVDGGNMLLHAFECLLVVDEDGKLAPGQAEDWDISEDGLTWTFQLRDGLKWSNGEVLT 120
Query: 113 IQSHTDSI 120
S
Sbjct: 121 ANDFVYSW 128
>gi|237733139|ref|ZP_04563620.1| predicted protein [Mollicutes bacterium D7]
gi|229383821|gb|EEO33912.1| predicted protein [Coprobacillus sp. D7]
Length = 240
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 13/112 (11%), Positives = 38/112 (33%), Gaps = 4/112 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-- 59
+K++ + I +SGC A + + + TD ++ F ++ + +
Sbjct: 1 MKKIVALLAIALVLSGCSDAKETVENQTANDVSTTDSLDDSFYRVVNLNTNLSREDYYTA 60
Query: 60 -DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ IG + + ++ ++ + + +L + T
Sbjct: 61 FGNTMDFQTIGRELQI-LSTDHFSTNDYYMSEGQYLKTDDMNQLLKRSEDTS 111
>gi|228906069|ref|ZP_04069958.1| CamS sex pheromone cAM373 [Bacillus thuringiensis IBL 200]
gi|228853478|gb|EEM98246.1| CamS sex pheromone cAM373 [Bacillus thuringiensis IBL 200]
Length = 397
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 36/112 (32%), Gaps = 17/112 (15%)
Query: 2 IKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K++ L++ + ISGC + + +KV + + D+
Sbjct: 1 MKKIALAVLSLGLLISGCSTGAEKDEKVAEKSGKAKEQSVVPKYAMSDEYYKTTIPFDGG 60
Query: 61 T--GIVVSRIGDMITCYIPV--------------HVSFVSEVFLEKKFLPML 96
G+VV + + + F LE +++ ML
Sbjct: 61 KARGLVVQGVNNRLDIDEFETGLMRIAKESFSTKDYFFKGGDTLEAQYVQML 112
>gi|327470903|gb|EGF16359.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sanguinis SK330]
Length = 272
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 30/98 (30%), Gaps = 4/98 (4%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K +L + + C ++ + K+ + DK +
Sbjct: 11 MKYSKLIFLAASVLVLGACSSGKDTTGDSSDKQAASSTSTVKKQDAEKDKISRQ-DTTPS 69
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPML 96
+ + + +VS+ + ++ K+ +L
Sbjct: 70 SDSTDTKKEQNHEAKTLDQNVSYNGSYYSVKGKYDEIL 107
>gi|162449046|ref|YP_001611413.1| hypothetical protein sce0776 [Sorangium cellulosum 'So ce 56']
gi|161159628|emb|CAN90933.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum 'So ce 56']
Length = 286
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 58/186 (31%), Gaps = 17/186 (9%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL-----QDTGIVVSRIGDMITCY 75
A + + + T+ K + + + E +L + V G
Sbjct: 102 AKTAQIEKGEAERQQTEAAKKSGVERVGQIKAELAGKLDKHVKKGVAAVAVAEGQAFVAL 161
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILN-----KFPSTVIAIQSHTDSIGT-----LKN 125
V + V + + +L ++ L+ + P V A+ S+
Sbjct: 162 SESAVFLPNTVDVSPQGQALLCQVSGALSASGGGQAPLRVGAVSGPPASVPAPLQAAYPT 221
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI-FP 184
+S RA + L + + +S G+A P + R+EI + P
Sbjct: 222 PWELSAVRAATVTQTLQDKCSVAGARLSAVGYAEHDPAAAALGETKLPPG-RVEIAVALP 280
Query: 185 RGNIKK 190
+ +K
Sbjct: 281 AASAEK 286
>gi|104783684|ref|YP_610182.1| hypothetical protein PSEEN4740 [Pseudomonas entomophila L48]
gi|95112671|emb|CAK17399.1| conserved hypothetical protein; putative signal peptide
[Pseudomonas entomophila L48]
Length = 978
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 5/46 (10%), Positives = 12/46 (26%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ L L +++ L + P + I+
Sbjct: 791 DLGTVAFAAGSSDLTPDAQSALDKLSSALKERPELRLEIEGTAAQN 836
>gi|239996781|ref|ZP_04717305.1| Dipeptidyl peptidase IV [Alteromonas macleodii ATCC 27126]
Length = 831
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 17/60 (28%), Gaps = 2/60 (3%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K L ++ + + GC + E S V + + ++
Sbjct: 1 MKKYSSLLIAASVTFALGGCASTTNEPSSQAASTSLPAATVQQTVTPDVAPQNSAKNGEI 60
>gi|259908887|ref|YP_002649243.1| Putative lipoprotein protein [Erwinia pyrifoliae Ep1/96]
gi|224964509|emb|CAX56019.1| Putative lipoprotein protein [Erwinia pyrifoliae Ep1/96]
gi|283478880|emb|CAY74796.1| Uncharacterized lipoprotein ymbA precursor [Erwinia pyrifoliae
DSM 12163]
gi|310767213|gb|ADP12163.1| Putative lipoprotein protein [Erwinia sp. Ejp617]
Length = 186
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 9/96 (9%), Positives = 27/96 (28%), Gaps = 6/96 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K + +++ ++ +S C + + + + + L
Sbjct: 1 MMKWIPIALALI--LSACSGTPKTVYYQLPMAATSAAVSSTSVIQPVWVERVTLPDYLAG 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
G+V + L+++ L
Sbjct: 59 NGVVYQSNDVQYVIAANNQWA----SPLDQQLQQTL 90
>gi|225628536|ref|ZP_03786570.1| lipoprotein [Brucella ceti str. Cudo]
gi|237816578|ref|ZP_04595570.1| lipoprotein [Brucella abortus str. 2308 A]
gi|225616382|gb|EEH13430.1| lipoprotein [Brucella ceti str. Cudo]
gi|237787391|gb|EEP61607.1| lipoprotein [Brucella abortus str. 2308 A]
Length = 104
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 18/113 (15%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
V V + + + L + + K I ++ TD+ + +++ RA
Sbjct: 6 DVTVFRPTSAQINQ-----LHTLLWPVPKH----INVRGLTDNNCPPPGDTQVARVRALA 56
Query: 137 IKSYLIQRGVSSNRFIS----VRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPR 185
I ++LI +GV ++R V+ +A P+ GR N+R++I+I +
Sbjct: 57 IYNWLINQGVPASRITISYAPVKDYASNAPLSP-----GRVLNRRVDIEILRK 104
>gi|114569024|ref|YP_755704.1| endothelin-converting protein 1 [Maricaulis maris MCS10]
gi|114339486|gb|ABI64766.1| endothelin-converting enzyme, Metallo peptidase, MEROPS family
M13 [Maricaulis maris MCS10]
Length = 695
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 28/95 (29%), Gaps = 14/95 (14%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L L+ + ++ C A+ + ++ GS L
Sbjct: 1 MKKLLLTSACVALMAACSPATETPETDTGTTEAAMPETSQPAGS----------PDLGSW 50
Query: 62 GIVVSRIGDMITCYIPVHVSFV----SEVFLEKKF 92
G+ + + D + + L + F
Sbjct: 51 GVEIEHVSDSVAPGDDFNRYVNEGWLDSTELPQGF 85
>gi|50120084|ref|YP_049251.1| hypothetical protein ECA1145 [Pectobacterium atrosepticum
SCRI1043]
gi|49610610|emb|CAG74055.1| putative lipoprotein [Pectobacterium atrosepticum SCRI1043]
Length = 192
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC S D S++ A+ L
Sbjct: 1 MLKKLFFPLLAIILLAGCAAKSNTLNISPKIGVPAQDPTLMGVTISINGADQRADQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G +IT + F
Sbjct: 60 ---KVNRDGQLITLTPSRDLRF 78
>gi|15924477|ref|NP_372011.1| hypothetical protein SAV1487 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927068|ref|NP_374601.1| hypothetical protein SA1318 [Staphylococcus aureus subsp. aureus
N315]
gi|156979806|ref|YP_001442065.1| LMP group of surface-lacated membrane protein [Staphylococcus
aureus subsp. aureus Mu3]
gi|255006273|ref|ZP_05144874.2| putative LMP group of surface-lacated membrane protein
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|13701286|dbj|BAB42580.1| hypothetical protein [Staphylococcus aureus subsp. aureus N315]
gi|14247258|dbj|BAB57649.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50]
gi|78771613|dbj|BAE47973.1| Similar to LMP group of surface-lacated membrane protein
[Staphylococcus aureus]
gi|156721941|dbj|BAF78358.1| Similar to LMP group of surface-lacated membrane protein
[Staphylococcus aureus subsp. aureus Mu3]
gi|285817168|gb|ADC37655.1| hypothetical protein SA2981_1444 [Staphylococcus aureus 04-02981]
Length = 298
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 25/92 (27%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L + +SGC + E + + AE + +
Sbjct: 1 MFKRIKLILIATIILSGCSTTNNESNNETKSVPEEMEASKYVGQGFQLPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
++G+ F L+ K
Sbjct: 61 HRKEFEKVGEQ---------FFKDNFGLKVKA 83
>gi|209694488|ref|YP_002262416.1| putative lipoprotein [Aliivibrio salmonicida LFI1238]
gi|208008439|emb|CAQ78604.1| putative lipoprotein [Aliivibrio salmonicida LFI1238]
Length = 108
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 5/26 (19%), Positives = 14/26 (53%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKK 27
+K++ L+ ++GC A +++
Sbjct: 1 MKKISLACAFALVLAGCSSAPKQQDN 26
>gi|148549771|ref|YP_001269873.1| hypothetical protein Pput_4569 [Pseudomonas putida F1]
gi|148513829|gb|ABQ80689.1| protein of unknown function DUF748 [Pseudomonas putida F1]
Length = 978
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 6/45 (13%), Positives = 14/45 (31%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ L + L +A+ L + P + I+ +
Sbjct: 791 DLGNVAFAPGSSELSGEAQSSLDKLASALKERPELRLEIEGTSAQ 835
>gi|313500612|gb|ADR61978.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 978
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 6/45 (13%), Positives = 14/45 (31%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ L + L +A+ L + P + I+ +
Sbjct: 791 DLGNVAFAPGSSELSGEAQSSLDKLASALKERPELRLEIEGTSAQ 835
>gi|308068350|ref|YP_003869955.1| ABC transporter binding protein yqgG precursor [Paenibacillus
polymyxa E681]
gi|305857629|gb|ADM69417.1| Probable ABC transporter binding protein yqgG precursor
[Paenibacillus polymyxa E681]
Length = 307
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 13/121 (10%), Positives = 34/121 (28%), Gaps = 15/121 (12%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ + +++ ++ ++ CG + + D + G+ L Q
Sbjct: 1 MLKKWPFILMTLTMVFALAACGSGNNAASQGEAATGTDNKAAAELTGNILAVGSTALQPL 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFV---------SEVFLEKK---FLPMLQLIATILNK 105
++ G + + V + + L+ A L
Sbjct: 61 VEQAGQKFMAVDKYKGIAVQVQGGGSGTGLTQVSGGQADIGNSDVFAKEKLESGADELVD 120
Query: 106 F 106
Sbjct: 121 H 121
>gi|26991388|ref|NP_746813.1| hypothetical protein PP_4704 [Pseudomonas putida KT2440]
gi|24986456|gb|AAN70277.1|AE016668_3 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 978
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 6/45 (13%), Positives = 14/45 (31%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ L + L +A+ L + P + I+ +
Sbjct: 791 DLGNVAFAPGSSELSGEAQSSLDKLASALKERPELRLEIEGTSAQ 835
>gi|307129924|ref|YP_003881940.1| putative lipoprotein [Dickeya dadantii 3937]
gi|306527453|gb|ADM97383.1| predicted lipoprotein [Dickeya dadantii 3937]
Length = 192
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ +F ++GC S D S++ A+ L
Sbjct: 1 MLKKFIFPLFAALVLAGCASKSNTLDVTPKITLPSQDPTLMGVTISINGADQRADQSLA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G ++T + F
Sbjct: 60 ---RVNRDGQLVTLTPSRDLRF 78
>gi|291458326|ref|ZP_06597716.1| ABC transporter, substrate-binding protein [Oribacterium sp. oral
taxon 078 str. F0262]
gi|291418859|gb|EFE92578.1| ABC transporter, substrate-binding protein [Oribacterium sp. oral
taxon 078 str. F0262]
Length = 437
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 11/109 (10%)
Query: 1 MIKE-----LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--- 52
M+K+ L++ ++ CG S E D + SS + +
Sbjct: 1 MMKKRQLGAAALAVLTGLALASCGGGSTESASTEKAAEKQADASEAKSDSSAEDGKGLVY 60
Query: 53 -EFQMQLQDTGIVVSRIGDMITCY--IPVHVSFVSEVFLEKKFLPMLQL 98
+ G V+ + + IP+ V F + + P L
Sbjct: 61 WSMWEATEPQGKVIREAAEKFSKDTGIPLDVQFKGRTGIREGLQPALDA 109
>gi|218709876|ref|YP_002417497.1| hypothetical protein VS_1889 [Vibrio splendidus LGP32]
gi|218322895|emb|CAV19072.1| hypothetical protein VS_1889 [Vibrio splendidus LGP32]
Length = 168
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 37/107 (34%), Gaps = 12/107 (11%)
Query: 2 IKELGLSMFIMTTISGCGLA----SREKKKVFLHKSNDTDIVNKRFGSSLDKA------- 50
+K++ L + + +SGC A + + + S TD++ + G D
Sbjct: 39 MKKIILLVLAFSVLSGCSSAPTRLDTSEFESLMSGSISTDVILEFTGCVYDGFLSSHSML 98
Query: 51 -EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + + Q++ G V + + V L + L
Sbjct: 99 TDVDTKQQIRTDGYRVETYAGGRMLLMSADILNSGHVELWESSAAAL 145
>gi|312867970|ref|ZP_07728174.1| putative lipoprotein [Streptococcus parasanguinis F0405]
gi|311096374|gb|EFQ54614.1| putative lipoprotein [Streptococcus parasanguinis F0405]
Length = 183
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 29/116 (25%), Gaps = 3/116 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ L+ + ++ C ++ K S + + K
Sbjct: 1 MKKFLLTSVCLLALTACS--QGQQGKGTTAASTKQETTQTKKEQVQTKTFVRDLGDHHQN 58
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
I + + I L+ LP L+ I + +
Sbjct: 59 KIQIGYKKEEI-VSFTFLSFEPISSDLQDMDLPELKEIYQEELEHSDIYKTLNGKP 113
>gi|163742566|ref|ZP_02149952.1| chemotaxis protein MotB [Phaeobacter gallaeciensis 2.10]
gi|161384151|gb|EDQ08534.1| chemotaxis protein MotB [Phaeobacter gallaeciensis 2.10]
Length = 278
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 23/184 (12%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG------------IVVSRI 68
AS D+ + + + D+ + QL+ G I+
Sbjct: 99 ASDISPADAQQAKGDSGVEQDKDREAADEQFRALEEQLKGRGGESMVSIEMAQHIITRVT 158
Query: 69 GDMITCYI----PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-- 122
+ + + + F ++ + + + IAI H S
Sbjct: 159 DEGLVVELFDTEESPLFKEGTAEPTLLFRDIV-KMVSRVTGVVENNIAIGGHIRSHAVVV 217
Query: 123 -LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S RAD + L G S R V G A + D+N N R+EI
Sbjct: 218 ANNPVWELSHARADATRVMLESGGTKSKRMHRVTGHADRKLTDSNPMS---ARNNRVEII 274
Query: 182 IFPR 185
+ +
Sbjct: 275 LLRK 278
>gi|146310562|ref|YP_001175636.1| hypothetical protein Ent638_0901 [Enterobacter sp. 638]
gi|145317438|gb|ABP59585.1| Uncharacterized lipoprotein [Enterobacter sp. 638]
Length = 192
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC D S++ A+ L
Sbjct: 1 MLKKLFFPLVALFMLAGCATPPTTIDVSPKITLPQQDPSLMGVTVSINGADQRQDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R +T + F
Sbjct: 60 ---KVTRDNQQVTLTASRDLRF 78
>gi|110832931|ref|YP_691790.1| hypothetical protein ABO_0070 [Alcanivorax borkumensis SK2]
gi|110646042|emb|CAL15518.1| hypothetical protein predicted by Glimmer/Critica [Alcanivorax
borkumensis SK2]
Length = 132
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 9/94 (9%), Positives = 30/94 (31%), Gaps = 5/94 (5%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L++ + ++ C +++ + +V T + + S + + + + + V
Sbjct: 7 MLAILVALVLAACSASNKGQMEVTEDGEVVTKVHSSNSLLSSRISVVDLRQKRVGDLLQV 66
Query: 66 SRIGDM-----ITCYIPVHVSFVSEVFLEKKFLP 94
+ + + LE + P
Sbjct: 67 QAVLENDWKFQLDFQYKFKWFDADGFELEPEAQP 100
>gi|15924478|ref|NP_372012.1| hypothetical protein SAV1488 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927069|ref|NP_374602.1| hypothetical protein SA1319 [Staphylococcus aureus subsp. aureus
N315]
gi|148267972|ref|YP_001246915.1| hypothetical protein SaurJH9_1545 [Staphylococcus aureus subsp.
aureus JH9]
gi|150394037|ref|YP_001316712.1| hypothetical protein SaurJH1_1576 [Staphylococcus aureus subsp.
aureus JH1]
gi|156979807|ref|YP_001442066.1| hypothetical protein SAHV_1476 [Staphylococcus aureus subsp.
aureus Mu3]
gi|255006274|ref|ZP_05144875.2| hypothetical protein SauraM_07395 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|258407516|ref|ZP_05680658.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258429305|ref|ZP_05688270.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258443525|ref|ZP_05691865.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258445591|ref|ZP_05693773.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|258448326|ref|ZP_05696450.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|258455539|ref|ZP_05703496.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|269203115|ref|YP_003282384.1| hypothetical protein SAAV_1478 [Staphylococcus aureus subsp.
aureus ED98]
gi|282895289|ref|ZP_06303500.1| hypothetical protein SGAG_02620 [Staphylococcus aureus A8117]
gi|282929835|ref|ZP_06336974.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|295407761|ref|ZP_06817540.1| hypothetical protein SMAG_02925 [Staphylococcus aureus A8819]
gi|297244662|ref|ZP_06928545.1| hypothetical protein SLAG_00747 [Staphylococcus aureus A8796]
gi|13701287|dbj|BAB42581.1| hypothetical protein [Staphylococcus aureus subsp. aureus N315]
gi|14247259|dbj|BAB57650.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50]
gi|147741041|gb|ABQ49339.1| protein of unknown function DUF1672 [Staphylococcus aureus subsp.
aureus JH9]
gi|149946489|gb|ABR52425.1| protein of unknown function DUF1672 [Staphylococcus aureus subsp.
aureus JH1]
gi|156721942|dbj|BAF78359.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|257840885|gb|EEV65337.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257849698|gb|EEV73664.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257851290|gb|EEV75232.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257855638|gb|EEV78571.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|257858410|gb|EEV81289.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|257862227|gb|EEV84998.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|262075405|gb|ACY11378.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus ED98]
gi|282589014|gb|EFB94121.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282762340|gb|EFC02489.1| hypothetical protein SGAG_02620 [Staphylococcus aureus A8117]
gi|285817169|gb|ADC37656.1| hypothetical protein SA2981_1445 [Staphylococcus aureus 04-02981]
gi|294967372|gb|EFG43422.1| hypothetical protein SMAG_02925 [Staphylococcus aureus A8819]
gi|297178692|gb|EFH37938.1| hypothetical protein SLAG_00747 [Staphylococcus aureus A8796]
gi|315128456|gb|EFT84464.1| hypothetical protein CGSSa03_13437 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329727357|gb|EGG63813.1| putative lipoprotein [Staphylococcus aureus subsp. aureus 21172]
Length = 301
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFSKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|315650943|ref|ZP_07903983.1| amino acid ABC superfamily ATP binding cassette transporter,
binding protein [Eubacterium saburreum DSM 3986]
gi|315486789|gb|EFU77131.1| amino acid ABC superfamily ATP binding cassette transporter,
binding protein [Eubacterium saburreum DSM 3986]
Length = 279
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 18/49 (36%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK 49
M K + ++GC A + +++ T + + + +K
Sbjct: 1 MKKIYLFGVLAALMLAGCSTAKTTESTSASQETSKTASESGKAADADNK 49
>gi|308814887|emb|CBM95497.1| neisserial heparin binding antigen [Neisseria meningitidis]
Length = 426
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 20/67 (29%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + D ED Q Q
Sbjct: 1 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTPSKPAAPVVAEKETDAKEDAPQAGSQG 60
Query: 61 TGIVVSR 67
G ++
Sbjct: 61 QGAPSTQ 67
>gi|296333513|ref|ZP_06875965.1| alkaline phosphatase III [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305673281|ref|YP_003864953.1| putative lipoprotein [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149352|gb|EFG90249.1| alkaline phosphatase III [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305411525|gb|ADM36644.1| putative lipoprotein [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 235
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 9/89 (10%), Positives = 23/89 (25%), Gaps = 9/89 (10%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + ++GC + +K+ K S +D ++
Sbjct: 1 MKRILSIFVFAIVLAGCSSNANTEKQSA------GGEQAKATPQSTSSQKDSIDEYQPNS 54
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ R + + L+
Sbjct: 55 QVTDDRSLLKVGQTFSDD---KGKAVLKD 80
>gi|294670685|ref|ZP_06735560.1| hypothetical protein NEIELOOT_02407 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307573|gb|EFE48816.1| hypothetical protein NEIELOOT_02407 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 384
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 19/48 (39%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD 48
++K+ L+ I ++ CG S + + + N +L+
Sbjct: 4 IMKKTLLTAMIALALAACGGKSEQATDSQNNGQSPATAANSGATDALN 51
>gi|293401483|ref|ZP_06645626.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305121|gb|EFE46367.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 139
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 11/118 (9%), Positives = 36/118 (30%), Gaps = 10/118 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHK-SNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K+L + + + ++ CG + K D + + D E + +D
Sbjct: 1 MKKLTVLLAALFMLTACGSSEEAKTGSAETAKDAKGDYASAKITVKGDAVESITLDETKD 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + + ++K++ ++ + + K + +
Sbjct: 61 GKSKKE---------LGANYNMKPHSKIKKEWNKQVEFLEKYIVKNGIDKVELTDQGY 109
>gi|148989852|ref|ZP_01821146.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP6-BS73]
gi|147924794|gb|EDK75878.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP6-BS73]
Length = 267
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + ++GC R + S+ + + + ++ E L +
Sbjct: 1 MKKLATLLLLSTVALAGCSSVQRSLRGDDYVDSSLAAEESSKVAA---QSAKELNDALTN 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ + + S+ + K P L +A
Sbjct: 58 ENANFPQLSKEVAEDEAEVILHTSQGDIRIKLSPKLAPLA 97
>gi|306829095|ref|ZP_07462285.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus mitis ATCC
6249]
gi|304428181|gb|EFM31271.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus mitis ATCC
6249]
Length = 238
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 10/107 (9%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + LS + T++ C + ++ + S ++ + ++ +
Sbjct: 1 MKKRYIILSGLLALTLAACSQEKTKVEENTQKTEQSSQPEGTVGSKSQASSQKKAEVVNK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
+ D I + L + +
Sbjct: 61 GDYYSIQGKYDKIVIANKHYPLSKDYNPGENPTAKAELLKLIAAMQA 107
>gi|295096779|emb|CBK85869.1| Uncharacterized lipoprotein [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 192
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC D S++ A+ L
Sbjct: 1 MLKKLFFPLVALFMLAGCATPPTTIDVSPKITLPQQDPSLMGVTVSINGADQRQDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R +T + F
Sbjct: 60 ---KVTRDNQQVTLTASRDLRF 78
>gi|157738459|ref|YP_001491143.1| hypothetical protein Abu_2260 [Arcobacter butzleri RM4018]
gi|315636759|ref|ZP_07891988.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|157700313|gb|ABV68473.1| conserved hypothetical protein [Arcobacter butzleri RM4018]
gi|315478976|gb|EFU69680.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 209
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 14/135 (10%), Positives = 47/135 (34%), Gaps = 4/135 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASRE-KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + L+ ++ +SGC ++ + + ++ + + ++ + +
Sbjct: 1 MFKNIFLAATLLFFMSGCSYKDKDVQNEHEKVETMKDGMSVANYKQENITLQNSLEATIS 60
Query: 60 D--TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML-QLIATILNKFPSTVIAIQSH 116
T I+ ++ D + + + +F ++ + + L+ +I +
Sbjct: 61 SLATQIMTNKKLDTTKPVLITSFVRLDQFKTTSEFGRVVGESLIDELSNRGFNIIEFRGQ 120
Query: 117 TDSIGTLKNNLLISQ 131
K +S+
Sbjct: 121 MAVSINDKGEYFLSR 135
>gi|313888761|ref|ZP_07822423.1| lipoprotein, YaeC family [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845238|gb|EFR32637.1| lipoprotein, YaeC family [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 280
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Query: 2 IKELGL--SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
K+L L S+ + ++GCG A ++ K D IV + + + + + +
Sbjct: 4 FKKLFLLGSVVLSLALTGCGGAKKDDAKAEAPADGDNKIVIGVSPTPHGEIIEGLKPEFE 63
Query: 60 DTG--IVVSRIGDMITCYIP 77
G + V D I +
Sbjct: 64 KEGLDVEVVNFDDYIQPNLQ 83
>gi|309780857|ref|ZP_07675598.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
gi|308920539|gb|EFP66195.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
Length = 350
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 27/76 (35%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L+ ++ ++GC R +V + ++ D A +
Sbjct: 1 MKNFILAAMVVGALAGCSDKPRGPVEVLGKTYMVASTATQVEFTNKDTATATDLSTGKHQ 60
Query: 62 GIVVSRIGDMITCYIP 77
+ GD++T +P
Sbjct: 61 EWKYTLQGDVMTITMP 76
>gi|251772840|gb|EES53400.1| conserved protein of unknown function [Leptospirillum
ferrodiazotrophum]
Length = 171
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K L + +SGC + + +L + + + L++AE + + L+D
Sbjct: 1 MLKRFSLIPLVTLVLSGCAATTEPPVRAWLSEQKAYAEIKQG---HLEQAETDLKKALRD 57
Query: 61 TGIVVSRIGDMITCYIPVHVS 81
+ + +M
Sbjct: 58 NPTDPTILNNMAFIQFKEGEF 78
>gi|227874368|ref|ZP_03992552.1| conserved hypothetical protein [Oribacterium sinus F0268]
gi|227839776|gb|EEJ50222.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length = 238
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 36/101 (35%), Gaps = 5/101 (4%)
Query: 1 MIKE----LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
++K L L++ ++ CG + + + KV T+ ++ + E
Sbjct: 23 IMKRKNLVLALAILSSLALAACGNSGKTETKVSAETEVTTEKATEKATEKASEKASEAAG 82
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ + + VS T + + V +K L +L
Sbjct: 83 EQKASNFSVSDKSLEFT-TENLALESVDSSIFGEKDLTVLN 122
>gi|311739977|ref|ZP_07713811.1| secreted protein [Corynebacterium pseudogenitalium ATCC 33035]
gi|311305050|gb|EFQ81119.1| secreted protein [Corynebacterium pseudogenitalium ATCC 33035]
Length = 185
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 23/178 (12%), Positives = 49/178 (27%), Gaps = 11/178 (6%)
Query: 1 MIK-ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K L ++ + +SGC + N + + + +L
Sbjct: 1 MLKVRLAATLLVAAFLSGCAAHESNPTTMAASADNSQLNPLGQANMEMKTLRPQAPSELT 60
Query: 60 DTGIVVSRIG--DMITCYIPVH---VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
T + + R + + + FV + I + I
Sbjct: 61 VTDVRIGRHEGFERVVFELDGGGAPGWFVDYAD-TPTQQGSGKTIDHSGETALNVNIDGV 119
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP----IDTNDT 168
+ G + + + I + ++ G R V G + P + N T
Sbjct: 120 VYPFEAGKDDPRIGVVDAPTEGIVTQVVNGGAYEGRCQFVIGMTSRKPYSVQVLDNPT 177
>gi|168484429|ref|ZP_02709381.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pneumoniae
CDC1873-00]
gi|172042328|gb|EDT50374.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pneumoniae
CDC1873-00]
gi|332203925|gb|EGJ17992.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family
protein [Streptococcus pneumoniae GA47368]
Length = 267
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + ++GC R + S+ + + + ++ E L +
Sbjct: 1 MKKLATLLLLSTVALAGCSSVQRSLRGDDYVDSSLAAEESSKVAA---QSAKELNDALTN 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ + + S+ + K P L +A
Sbjct: 58 ENTNFPQLSKEVAEDEAEVILHTSQGDIRIKLFPKLAPLA 97
>gi|206967658|ref|ZP_03228614.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206736578|gb|EDZ53725.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length = 201
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 3/109 (2%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDI-VNKRFGSSLDKAEDEFQMQ 57
M K + L + + +S C +++ K++ + D I V + SS + E+ + +
Sbjct: 1 MKKYILYPLMLLTILFLSACSNSAQPKEENDVQSIKDVAIKVPENIFSSSKENENISEDE 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ + I S S+ + LQ + + +
Sbjct: 61 MRQNIKNYIDYSWELAENIISLASTNSDKNFTESDREKLQKLIELAKQN 109
>gi|56962428|ref|YP_174154.1| hypothetical protein ABC0654 [Bacillus clausii KSM-K16]
gi|56908666|dbj|BAD63193.1| hypothetical protein [Bacillus clausii KSM-K16]
Length = 212
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 10/87 (11%)
Query: 1 MIKELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K + LS ++ ++ CG ++D++ + ++ DK ++
Sbjct: 20 MKKYMTLSALVLASTLALAACG-------DEADISASDSNTDAEAEETNTDKESEDNSET 72
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVS 84
+ G V ++ I V+F
Sbjct: 73 EAEDGAEVDEGEEVSGFQIGDEVNFND 99
>gi|148651883|ref|YP_001278976.1| amidohydrolase 3 [Psychrobacter sp. PRwf-1]
gi|148570967|gb|ABQ93026.1| Amidohydrolase 3 [Psychrobacter sp. PRwf-1]
Length = 618
Score = 40.0 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 45/178 (25%), Gaps = 29/178 (16%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
K L L + +S C S + +S D + N + DK + ++D
Sbjct: 7 KKNLILFAGAASVLSACATQSTPQGSYNTLQSADMIVTNAKVAVMDDKRTTAEAIAVKDG 66
Query: 62 GI------------------VVSRIGDMITCYIPVHVSFVS------EVFLEKKFLPMLQ 97
+ V+ G + + ++ L + L+
Sbjct: 67 KVLRTGSAAEILRLRDAHTQVIDGHGRTLIPGLNDSHLHITRGGRFYNSELRWDGVTSLK 126
Query: 98 LIATILNKFPSTV-----IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+L + + + + + +E + +R
Sbjct: 127 EALRMLKEQAERTPKGQWVRVIGGWSPYQFEEKRMPTIEEINEATGDTPAFVLYLYSR 184
>gi|300114482|ref|YP_003761057.1| chemotaxis protein MotB-like protein [Nitrosococcus watsonii C-113]
gi|299540419|gb|ADJ28736.1| chemotaxis protein MotB-related protein [Nitrosococcus watsonii
C-113]
Length = 250
Score = 40.0 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 69/213 (32%), Gaps = 36/213 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L ++ ++ ++ L + + + D + + D E + +L I
Sbjct: 25 LMSALLVIFILAAVALIIELTQTQKKIEQDI-DQLKNAEQARRDIL-HEIRDELAKRNIK 82
Query: 65 VSRIGDMITCYIPVHV--SFVSEVFLEKK--FLPMLQLIATILNKFPST----------- 109
+ + IP + L + I +L+ +
Sbjct: 83 ILIADNDTVLRIPESTLAFASNSYALPADEKVRSSVVAIGQVLHAAINRSFKPGVSEKRR 142
Query: 110 -----VIAIQSHTDSIGTLKN--NLLISQERADVIKSYLI-----------QRGVSSNRF 151
+ I+ HTDS T + N +S RA + Y ++
Sbjct: 143 FDYLDTVFIEGHTDSRPTKRIKGNWGLSTFRAISLWEYWDDVLDVSPVLTDMSNAFGDKL 202
Query: 152 ISVRGFAYKYPIDTND-TKVGRQNNQRIEIQIF 183
SV G+A ++ + T+ R+ N+RI+I+
Sbjct: 203 FSVSGYAATRRVNEAEITREDRRENRRIDIRFT 235
>gi|270293170|ref|ZP_06199381.1| putative lipoprotein [Streptococcus sp. M143]
gi|270279149|gb|EFA24995.1| putative lipoprotein [Streptococcus sp. M143]
Length = 238
Score = 40.0 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 10/107 (9%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + LS + T++ C + ++ + S ++ + ++ +
Sbjct: 1 MKKRYIVLSGLLAVTLAACSQEQPKNEENTQKTEQTSQPEGTVGSKSQASSQKKAEVVNK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
+ D I + L + +
Sbjct: 61 GDHYSIQGKYDEIVVANKHYPLSKDYNPGENPTAKAELVKLIAAMQA 107
>gi|198275275|ref|ZP_03207806.1| hypothetical protein BACPLE_01434 [Bacteroides plebeius DSM
17135]
gi|198271858|gb|EDY96128.1| hypothetical protein BACPLE_01434 [Bacteroides plebeius DSM
17135]
Length = 222
Score = 40.0 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 2 IKELGLSMFIMTTIS-GCGLASREKKKVFLHKSNDTDIVNKRFG 44
+K++ + I++ +S GCG E+ + + + V G
Sbjct: 1 MKKVAILFLIVSLLSSGCGTTQPERTGAIVGGAAIGNSVGGAIG 44
>gi|157150376|ref|YP_001451114.1| putative lipoprotein [Streptococcus gordonii str. Challis substr.
CH1]
gi|157075170|gb|ABV09853.1| lipoprotein, putative [Streptococcus gordonii str. Challis substr.
CH1]
Length = 180
Score = 40.0 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 12/103 (11%), Positives = 37/103 (35%), Gaps = 7/103 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L+ + T++ C S+ K++ K + + K + + ++
Sbjct: 1 MKKILLASICLLTLTACSTTSQNKQENT-PKQSQSQSKTKEEKTQTKTFSKKIDEHYTNS 59
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEV------FLEKKFLPMLQL 98
+ +++ + + E L+K + L+
Sbjct: 60 VKLFYTKDKILSFQLISSQAIPEESQKMSVEELKKSYSEDLKK 102
>gi|21283105|ref|NP_646193.1| hypothetical protein MW1376 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486326|ref|YP_043547.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253733264|ref|ZP_04867429.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH130]
gi|297207854|ref|ZP_06924287.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300911939|ref|ZP_07129382.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH70]
gi|21204545|dbj|BAB95241.1| hypothetical protein [Staphylococcus aureus subsp. aureus MW2]
gi|49244769|emb|CAG43205.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253728804|gb|EES97533.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH130]
gi|296887428|gb|EFH26328.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300886185|gb|EFK81387.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH70]
Length = 301
Score = 40.0 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAVEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|229168269|ref|ZP_04295994.1| VanW [Bacillus cereus AH621]
gi|228615095|gb|EEK72195.1| VanW [Bacillus cereus AH621]
Length = 303
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 49/170 (28%), Gaps = 21/170 (12%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK + + + + +SGCG + + +D + D D + T
Sbjct: 5 IKGILVGVLCVAVVSGCGTKVSDV-------ALVSDFGGNVVEAKADVQ-DSISLVDGRT 56
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G V + + F E KF + +A+ + K +
Sbjct: 57 GTEVKK------LDLSSLGYFEDEA----KFKAAVTKVASEVGKSVDKKMVPSRLAPDGT 106
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +++ L S+ + + K P+ T G
Sbjct: 107 WQEGKPAYELMEKELVAKLLNVGMWDSSYQLPIV---EKKPVATLSDAQG 153
>gi|310641048|ref|YP_003945806.1| iron iii dicitrate transport protein-like protein [Paenibacillus
polymyxa SC2]
gi|309245998|gb|ADO55565.1| Iron III dicitrate transport protein-like protein [Paenibacillus
polymyxa SC2]
Length = 331
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 17/56 (30%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M+ L L + ++GCG A K S T D E +
Sbjct: 4 MLNGLLLFVVFAIVLAGCGSAGDSSKTEGAAGSEQTSTAAGPVTVKDDHGEVKLDK 59
>gi|227872223|ref|ZP_03990584.1| hypothetical protein HMPREF6123_0523 [Oribacterium sinus F0268]
gi|227841909|gb|EEJ52178.1| hypothetical protein HMPREF6123_0523 [Oribacterium sinus F0268]
Length = 288
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 39/142 (27%), Gaps = 7/142 (4%)
Query: 1 MIKE-----LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M K L ++ +I+ C + ++ + +K + +
Sbjct: 1 MKKNFLKHTLFIAALSALSITACSSKTAKESSTVSPTEAAKESSSKDLSDAKKENSKTDS 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + T + + L + L ++ + P + A ++
Sbjct: 61 KDTEKENSAPNPAESGATTESEKEKAENNSDSLVGAYNTNL--VSFSIKDNPDAMNAFEA 118
Query: 116 HTDSIGTLKNNLLISQERADVI 137
+ + I+ V+
Sbjct: 119 AFPNGYNYTHYEPIALLGTQVV 140
>gi|254562141|ref|YP_003069236.1| hypothetical protein METDI3747 [Methylobacterium extorquens DM4]
gi|254269419|emb|CAX25385.1| Conserved hypothetical protein, tetratricopeptide TPR_2 repeat
protein [Methylobacterium extorquens DM4]
Length = 282
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 19/173 (10%), Positives = 50/173 (28%), Gaps = 24/173 (13%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ L + ++GC S E T + ++AE + ++
Sbjct: 18 RRLLALAVVGLGLAGCQSRSPET----------TGSIGGLNLLGANRAERSPRAEIDALA 67
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ + + + + + + + +LQ +A + P + + ++ S+
Sbjct: 68 ARYNADPNDVRAAMRYAAALR-ATDQKSQAVAVLQQVA---LRNPKDKVVLAAYGKSLAD 123
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
A+ + R +S +G + R N
Sbjct: 124 AGRYQE-----ANEVLQNAHSPAQPDWRVLSAQGM-----VADETGDHARAQN 166
>gi|228989510|ref|ZP_04149495.1| Ferrichrome-binding periplasmic protein [Bacillus pseudomycoides
DSM 12442]
gi|228770235|gb|EEM18814.1| Ferrichrome-binding periplasmic protein [Bacillus pseudomycoides
DSM 12442]
Length = 307
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 45/115 (39%), Gaps = 9/115 (7%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L +S+ + +S C S +KK K + ++ + + + + ++
Sbjct: 1 MKKLFISLTVLFVLVMSACSNGSTDKKNDSNAKGSKSETITYQSEN------GKVEVPAN 54
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAI 113
+VV + V++ V + +F L+ + + ++ +I +
Sbjct: 55 PKRVVVLSSFAGNVISLGVNLVGVDSWSKMNPRFEKKLKDVTEVSDENVEKIIEL 109
>gi|237798570|ref|ZP_04587031.1| hypothetical protein POR16_07015 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021423|gb|EGI01480.1| hypothetical protein POR16_07015 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 849
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 662 DLGSVSFAPGSSDLSAEAQKALDKLSGALKERPDLKLEIEG 702
>gi|126667791|ref|ZP_01738758.1| hypothetical lipoprotein [Marinobacter sp. ELB17]
gi|126627739|gb|EAZ98369.1| hypothetical lipoprotein [Marinobacter sp. ELB17]
Length = 116
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 6/47 (12%), Positives = 16/47 (34%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL 47
++K+L + +F ++GC + + + S
Sbjct: 2 IVKKLLVMVFAAFVLAGCATTGNDFSSNQIDEIVVGQTTKADIVSWF 48
>gi|315642466|ref|ZP_07897005.1| conserved hypothetical protein [Enterococcus italicus DSM 15952]
gi|315482273|gb|EFU72831.1| conserved hypothetical protein [Enterococcus italicus DSM 15952]
Length = 161
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQD 60
+K + +S+ + ++GC + E + + S + A E++ +
Sbjct: 31 MKMIFISLLTVAVLAGCSETAEETPRTNSPDETTAVTQSTSDTSDSETATEEDLSESEAE 90
Query: 61 TG 62
+
Sbjct: 91 SP 92
>gi|301167893|emb|CBW27478.1| putative sodium-driven polar flagellar protein [Bacteriovorax
marinus SJ]
Length = 288
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 21/162 (12%), Positives = 55/162 (33%), Gaps = 19/162 (11%)
Query: 39 VNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKK--FLPM 95
+N+ L +++ + + + + I + + F + + + + +
Sbjct: 121 INRESDEELKTMKNDLYEYNLSDSVNIYEMPEGIKVKVKDKILFRYGSLRIANEQVSIEV 180
Query: 96 LQLIATILNKFPSTVIAIQSHTDS------IGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ +L + +Q ++ G + +S RA + LI+R
Sbjct: 181 YTRLVRLL-TNKDWSVFVQGYSSRGEVSTEDGKNMDAFELSAARASAVTRSLIRR-GVKP 238
Query: 150 RFISVRGFAYKYPIDTN-----DTKVGRQNNQRIEIQIFPRG 186
IS + P N T++ R ++R++ + R
Sbjct: 239 DQISTVFYGDIRP--ENIPGRSQTEIERA-SRRVDFILRKRD 277
>gi|238925215|ref|YP_002938732.1| hypothetical protein EUBREC_2869 [Eubacterium rectale ATCC 33656]
gi|238876891|gb|ACR76598.1| Hypothetical protein EUBREC_2869 [Eubacterium rectale ATCC 33656]
Length = 381
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 17/181 (9%), Positives = 55/181 (30%), Gaps = 21/181 (11%)
Query: 2 IKELG-LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K++ + + + ++ C + V + + + L+ ++E +L
Sbjct: 1 MKKICYIILILCFSLVSCAPT----ENVIDDGTQANTTDLNDYENVLNSLDEEQIGKLPQ 56
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEK-------------KFLPMLQLIATILNKFP 107
V D + +++ + +++ K +++ +A +N
Sbjct: 57 NIKCVVN--DKLNIDSEINIWDATSYYVKSGKVKAINFSENKDKCYDLMEKLAKAINLNK 114
Query: 108 STVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA-YKYPIDTN 166
+ + + +Q+ + + +S F Y P +
Sbjct: 115 DVCVQSHRSENGNEIYLWDNNYTQDSIAIRNDSALAETHDGKLAVSASKFGTYYSPFNDK 174
Query: 167 D 167
D
Sbjct: 175 D 175
>gi|197337853|ref|YP_002158755.1| outer membrane protein [Vibrio fischeri MJ11]
gi|197315105|gb|ACH64554.1| outer membrane protein [Vibrio fischeri MJ11]
Length = 322
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A + + ++I +TD+ GT N + S RA LI+ GV R + +
Sbjct: 232 NELALSVKQGQG-KVSITGYTDAKGTDSANDIESLRRATYAADMLIKAGVDEERIL-INS 289
Query: 157 FAYKYPIDTND---TKVGRQNNQRIEIQ 181
P+ D + N+R+ IQ
Sbjct: 290 KGSADPLVNEDLMRNES--ALNRRVVIQ 315
>gi|160889612|ref|ZP_02070615.1| hypothetical protein BACUNI_02038 [Bacteroides uniformis ATCC 8492]
gi|156860604|gb|EDO54035.1| hypothetical protein BACUNI_02038 [Bacteroides uniformis ATCC 8492]
Length = 197
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 38/116 (32%), Gaps = 8/116 (6%)
Query: 37 DIVNKRFGSSLDKAEDEFQM------QLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLE 89
D VN + L + V + + P + F L+
Sbjct: 81 DAVNAEINRYRSELAQAQADLANCKNALANAKPEVKEVTKEVEVAGPRAIFFKIGSARLD 140
Query: 90 KKFLPMLQLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQERADVIKSYLIQR 144
++L A IL P + + D G+ N +S++RA V+ LI +
Sbjct: 141 DYGKVNIELAAKILKANPDKKYKVAGYADKATGSASWNQKLSEKRAQVVYDALIAQ 196
>gi|126666622|ref|ZP_01737600.1| FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Marinobacter sp.
ELB17]
gi|126629010|gb|EAZ99629.1| FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Marinobacter sp.
ELB17]
Length = 238
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 13/113 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFL--HKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+ ++ I ++GC A K L + + + G + + QM+
Sbjct: 1 MKKTLFALTIAGLVAGCSSAQEAPKDPALESNSEKVSYGMGLVMGERMGNDLPDLQMEQF 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
GI GD + +++ L L + S I
Sbjct: 61 LQGIQHGNNGDQAQRRMT-----------QEEIQEALMAYQQKLQEDQSKQIE 102
>gi|59714283|ref|YP_207058.1| outer membrane protein A [Vibrio fischeri ES114]
gi|59482531|gb|AAW88170.1| outer membrane protein A [Vibrio fischeri ES114]
Length = 324
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
+A + + ++I +TD+ GT N + S RA LI+ GV R + +
Sbjct: 234 NELALSVKQGQG-KVSITGYTDAKGTDSANDIESLRRATYAADMLIKAGVDEERIL-INS 291
Query: 157 FAYKYPIDTND---TKVGRQNNQRIEIQ 181
P+ D + N+R+ IQ
Sbjct: 292 KGSADPLVNEDLMRNES--ALNRRVVIQ 317
>gi|299822225|ref|ZP_07054111.1| oligopeptide ABC superfamily ATP binding cassette transporter,
binding protein [Listeria grayi DSM 20601]
gi|299815754|gb|EFI82992.1| oligopeptide ABC superfamily ATP binding cassette transporter,
binding protein [Listeria grayi DSM 20601]
Length = 542
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 7/80 (8%)
Query: 1 MIKELGLSMFIM---TTISGCG----LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
M K++GL M IM ++ CG + + I D +
Sbjct: 1 MKKKIGLIMAIMVIGMVLAACGKGNDTKGANSDNKAIKVTAQGQIATLDSALYSDVFSSD 60
Query: 54 FQMQLQDTGIVVSRIGDMIT 73
Q+ + +V + +
Sbjct: 61 AIGQIVEGLYLVDDNNNAVL 80
>gi|190404429|ref|YP_001961060.1| rcorf85 [Agrobacterium rhizogenes]
gi|158322225|gb|ABW33642.1| rcorf85 [Agrobacterium rhizogenes]
Length = 146
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 8/79 (10%), Positives = 21/79 (26%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+++L +SGC A + + G + ++ T
Sbjct: 1 MRKLLALFIAAKLLSGCQTADDAMTTNATPVAVTGPAASAIAGDMASRLAEQIGPASAAT 60
Query: 62 GIVVSRIGDMITCYIPVHV 80
I + + + +
Sbjct: 61 TIKMEKDQSEFATALEAAL 79
>gi|269122317|ref|YP_003310494.1| outer membrane autotransporter barrel domain protein [Sebaldella
termitidis ATCC 33386]
gi|268616195|gb|ACZ10563.1| outer membrane autotransporter barrel domain protein [Sebaldella
termitidis ATCC 33386]
Length = 913
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 6/84 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K+L L + ++ + C + + + N + + D + +
Sbjct: 1 MKKKLILIIALVIVVLSCSSSGGQSNQ------NPSPSPPTPIDVTRDIPFNPEDPHNNN 54
Query: 61 TGIVVSRIGDMITCYIPVHVSFVS 84
GD IT I +
Sbjct: 55 EAKETDSDGDNITVGIVDSNFDTT 78
>gi|167035694|ref|YP_001670925.1| hypothetical protein PputGB1_4703 [Pseudomonas putida GB-1]
gi|166862182|gb|ABZ00590.1| protein of unknown function DUF748 [Pseudomonas putida GB-1]
Length = 978
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 6/45 (13%), Positives = 13/45 (28%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ L L +A+ L + P + I+ +
Sbjct: 791 DLGNVAFAPGSSELSGDAQSSLDKLASALKERPELRLEIEGTSAQ 835
>gi|326790554|ref|YP_004308375.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM
5427]
gi|326541318|gb|ADZ83177.1| ABC-type transporter, periplasmic subunit [Clostridium
lentocellum DSM 5427]
Length = 564
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 8/73 (10%), Positives = 22/73 (30%), Gaps = 5/73 (6%)
Query: 1 MIKELGLSMFIMTT----ISGCGL-ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M K+L L + ++ ++GC ++ + + A+ +
Sbjct: 1 MKKKLTLGLAMLMASSMALAGCASKTETAGGNATGSEATTGETGTDSDEDYVLAADQTLR 60
Query: 56 MQLQDTGIVVSRI 68
L + +
Sbjct: 61 YNLGADPLTLDPQ 73
>gi|326941863|gb|AEA17759.1| hypothetical protein CT43_CH4096 [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 247
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 1 MMKKLIITLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 58
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 59 TQGKEKVTDADDVKFEI 75
>gi|229149201|ref|ZP_04277442.1| hypothetical protein bcere0011_7660 [Bacillus cereus m1550]
gi|228634400|gb|EEK90988.1| hypothetical protein bcere0011_7660 [Bacillus cereus m1550]
Length = 198
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 41/109 (37%), Gaps = 3/109 (2%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDI-VNKRFGSSLDKAEDEFQMQ 57
M K + L + + +S C +++ K++ + D I V + SS K E + +
Sbjct: 1 MKKYILYPLMLLTILFLSACSNSAQPKEENDVQSIKDVAIKVPENIFSSSKKNETINEDE 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ + I S +S+ + + L+ + + +
Sbjct: 61 MKQNIKTYLDYSGELYENIVPLSSAMSDEKVTESDRDKLKKLIDLAQQN 109
>gi|167761589|ref|ZP_02433716.1| hypothetical protein CLOSCI_04000 [Clostridium scindens ATCC 35704]
gi|167660732|gb|EDS04862.1| hypothetical protein CLOSCI_04000 [Clostridium scindens ATCC 35704]
Length = 367
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 30/226 (13%), Positives = 65/226 (28%), Gaps = 56/226 (24%)
Query: 1 MIKELGLS---MFIMTTISGCGL-----------ASREKKKVFLHKSNDTDIVNKRFGSS 46
M K++ LS + M ++GCG S +K+K + D + K
Sbjct: 6 MKKKIILSAAFLLSMLFLAGCGKDSADKYVGEEITSMKKEKADCFAAVLEDGIAKSNQEY 65
Query: 47 LDKAEDEFQMQLQ-----------------------DTGIVVS----RIGDMITCYIPVH 79
+ + +E + Q + + V+ +G+ +
Sbjct: 66 VLQFPEELKEPYQKFLQECFKTIEFEVASAKKGDDGNYKVDVTYTPLNVGETLKSSDSEK 125
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI--------QSHTDSIGTLKNNLLISQ 131
+ + L + +L+ A IL P + + +I +SQ
Sbjct: 126 ANALKSSDLTAETSALLESDAKILADKPKYQAEVISTLEVKKDGDSFAISNDSLKAFLSQ 185
Query: 132 ERADVIK-----SYLIQRGVSSNRFISVRGFAYKYPID--TNDTKV 170
D ++ ++ ++ TN T+
Sbjct: 186 ALYDCMEPYNAVCEILDVQNFMQSYLDASFKGEVEQFAKHTNRTEE 231
>gi|271499594|ref|YP_003332619.1| lipoprotein [Dickeya dadantii Ech586]
gi|270343149|gb|ACZ75914.1| Uncharacterized lipoprotein [Dickeya dadantii Ech586]
Length = 192
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ +F ++GC S D S++ A+ L
Sbjct: 1 MLKKFIFPLFAALVLAGCASKSNTLDVTPKIALPSQDPTLMGVTISINGADQRADQSLA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G +IT + F
Sbjct: 60 ---RVNRDGQLITLMPSRDLRF 78
>gi|206971372|ref|ZP_03232323.1| putative lipoprotein [Bacillus cereus AH1134]
gi|296504584|ref|YP_003666284.1| hypothetical protein BMB171_C3754 [Bacillus thuringiensis BMB171]
gi|206734144|gb|EDZ51315.1| putative lipoprotein [Bacillus cereus AH1134]
gi|296325636|gb|ADH08564.1| hypothetical protein BMB171_C3754 [Bacillus thuringiensis BMB171]
Length = 247
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 1 MMKKLIITLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 58
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 59 TQGKEKVTDADDVKFEI 75
>gi|223983508|ref|ZP_03633693.1| hypothetical protein HOLDEFILI_00974 [Holdemania filiformis DSM
12042]
gi|223964503|gb|EEF68830.1| hypothetical protein HOLDEFILI_00974 [Holdemania filiformis DSM
12042]
Length = 227
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 30/94 (31%), Gaps = 11/94 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASRE-----KKKVFLHKSNDTDIVNKRFGS------SLDKA 50
+K+L + ++GC +E + + + + S D A
Sbjct: 1 MKKLFAIALSVLLLAGCASTPKECPPCATPDASEPTTAAPAPLPEPRDTTKTYKPSKDAA 60
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
++ ++ TG + ++ V ++
Sbjct: 61 DEACTAEVWATGCSSINVDNLTEYLGRDDVLYID 94
>gi|331003483|ref|ZP_08326982.1| hypothetical protein HMPREF0491_01844 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412529|gb|EGG91918.1| hypothetical protein HMPREF0491_01844 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 193
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 16/61 (26%), Gaps = 1/61 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L + + IS C + + D DK Q D
Sbjct: 1 MKKIIFLIIASVFLISACSSV-KNTVDGAKSEITKNDKQPLEEKEYKDKVIAALDNQNAD 59
Query: 61 T 61
Sbjct: 60 E 60
>gi|291530216|emb|CBK95801.1| hypothetical protein EUS_05050 [Eubacterium siraeum 70/3]
Length = 455
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 42/131 (32%), Gaps = 10/131 (7%)
Query: 1 MIKELG---LSMFIMTTISGCG----LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
M K + ++ + +++GC +S + +S+DT SS D+++DE
Sbjct: 6 MKKRILAVLIATALAVSVTGCAGNATSSSDSTSASSVAESSDTSTQTSADASSEDESKDE 65
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
+ + T + + L + L + L +
Sbjct: 66 SSQE---ESKDLEANYTKYTLDGDLTQHMIDMSRLNEGNKVRLANVIKKLKNGEEVTVGF 122
Query: 114 QSHTDSIGTLK 124
+ + GT
Sbjct: 123 IGGSITQGTSA 133
>gi|332520852|ref|ZP_08397312.1| hypothetical protein LacalDRAFT_1925 [Lacinutrix algicola
5H-3-7-4]
gi|332043382|gb|EGI79578.1| hypothetical protein LacalDRAFT_1925 [Lacinutrix algicola
5H-3-7-4]
Length = 347
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 7/88 (7%), Positives = 25/88 (28%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + + + ++ C + + I+ G + +
Sbjct: 1 MKKIIYSVLTLALLVTSCSNDDDLATPSEPLGAYEDGIIVSSEGGPSSISYVSNDFSTSE 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFL 88
+ + G+ + Y+ + ++
Sbjct: 61 NQVYFNVNGENLGVYLQSVGFHEDKAYI 88
>gi|228941241|ref|ZP_04103794.1| hypothetical protein bthur0008_38800 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228974173|ref|ZP_04134743.1| hypothetical protein bthur0003_39270 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228980764|ref|ZP_04141069.1| hypothetical protein bthur0002_39290 [Bacillus thuringiensis
Bt407]
gi|228778933|gb|EEM27195.1| hypothetical protein bthur0002_39290 [Bacillus thuringiensis
Bt407]
gi|228785513|gb|EEM33522.1| hypothetical protein bthur0003_39270 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228818400|gb|EEM64472.1| hypothetical protein bthur0008_38800 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 248
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 2 MMKKLIITLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 59
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 60 TQGKEKVTDADDVKFEI 76
>gi|229192301|ref|ZP_04319266.1| hypothetical protein bcere0002_39540 [Bacillus cereus ATCC 10876]
gi|228591251|gb|EEK49105.1| hypothetical protein bcere0002_39540 [Bacillus cereus ATCC 10876]
Length = 248
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 2 MMKKLIITLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 59
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 60 TQGKEKVTDADDVKFEI 76
>gi|120553407|ref|YP_957758.1| peptidylprolyl isomerase, FKBP-type [Marinobacter aquaeolei VT8]
gi|120323256|gb|ABM17571.1| peptidylprolyl isomerase, FKBP-type [Marinobacter aquaeolei VT8]
Length = 244
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSND 35
M+K+ L++ + I+GC A L + +
Sbjct: 1 MMKKTLLAIAVTGLIAGCSTAQEPANDPALETTPE 35
>gi|300858296|ref|YP_003783279.1| hypothetical protein cpfrc_00878 [Corynebacterium
pseudotuberculosis FRC41]
gi|300685750|gb|ADK28672.1| putative secreted protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302206017|gb|ADL10359.1| Putative ABC-type Fe3+-hydroxamate transport system, periplasmic
component [Corynebacterium pseudotuberculosis C231]
Length = 355
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 4/114 (3%)
Query: 2 IKELGLSMFIM-TTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEFQMQLQ 59
+K++ + + M +S CG A+ + + V + DKA + F
Sbjct: 1 MKKIIIPILGMSLVLSACGGATSDSSQGATAAKTGGVSVTNCGEEVTFDKANELFVN--D 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
I ++ V + L KF + + +PS +
Sbjct: 59 GNIISIALAAGAGDKIKYVSSLQRDKEILRAKFGDQVDSLNDTSKDYPSLETVV 112
>gi|289450247|ref|YP_003475125.1| extracellular solute-binding protein [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289184794|gb|ADC91219.1| bacterial extracellular solute-binding protein [Clostridiales
genomosp. BVAB3 str. UPII9-5]
Length = 442
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 51/174 (29%), Gaps = 37/174 (21%)
Query: 1 MIKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K + SM M +S C + +
Sbjct: 1 MKKAISYMACSMAAMLALSACSSTASPASTTASPSEAAS--------------------- 39
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
T + + +I + S +E +L+ Q++ + + P+ I +Q++
Sbjct: 40 TDSTAVSETSNKPVIITFAQYSGSGDNEQYLK-------QMVDKYMKENPNVTIDLQTYG 92
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +S +A + + F+S P+D TK G
Sbjct: 93 YDNYFTQMTAKVSGGQAPDVFE------LDYQNFVSYAKKGALMPLDKILTKDG 140
>gi|288556611|ref|YP_003428546.1| ferrichrome ABC transporter ferrichrome-binding protein [Bacillus
pseudofirmus OF4]
gi|288547771|gb|ADC51654.1| Ferrichrome ABC transporter (ferrichrome-binding protein) [Bacillus
pseudofirmus OF4]
Length = 311
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 12/117 (10%), Positives = 26/117 (22%), Gaps = 14/117 (11%)
Query: 1 MIKELGL--SMFIMTTISGCGLASREKKKVF-------LHKSNDTDIVNKRFGSSLDKAE 51
M K+L + M ++ +S CG S + + N D
Sbjct: 1 MKKQLLIPFLMLLVLVLSACGSTSEDSASSAEEDTNTEETGTVTYQSENGPIEVPADPQR 60
Query: 52 DEFQMQLQDT-----GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ + + + + L + + L
Sbjct: 61 VVVLSSFNAGSVMALDVPIVGVDSWAKMNPRYEEYIGDAAEVTDESLEQIIELDPDL 117
>gi|42782598|ref|NP_979845.1| VanW-related protein [Bacillus cereus ATCC 10987]
gi|206975379|ref|ZP_03236292.1| putative lipoprotein [Bacillus cereus H3081.97]
gi|217960926|ref|YP_002339494.1| putative lipoprotein [Bacillus cereus AH187]
gi|229140137|ref|ZP_04268695.1| VanW [Bacillus cereus BDRD-ST26]
gi|229197641|ref|ZP_04324362.1| VanW [Bacillus cereus m1293]
gi|42738524|gb|AAS42453.1| VanW-related protein [Bacillus cereus ATCC 10987]
gi|206746281|gb|EDZ57675.1| putative lipoprotein [Bacillus cereus H3081.97]
gi|217064723|gb|ACJ78973.1| putative lipoprotein [Bacillus cereus AH187]
gi|228585830|gb|EEK43927.1| VanW [Bacillus cereus m1293]
gi|228643223|gb|EEK99496.1| VanW [Bacillus cereus BDRD-ST26]
Length = 303
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 48/169 (28%), Gaps = 21/169 (12%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K + + + + +SGCG + + G +A+ E Q + +
Sbjct: 6 KGILVGVLCVAVVSGCGTKVSD------------VALVSDIGGHTVEAKAEVQDSI--SL 51
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ ++ + F E KF ++ +A + K +
Sbjct: 52 VDGRTGTEVKKLDLSSLGYFEDEA----KFKKSVEKVAREVGKNVDKKMVPSRLGSDGSW 107
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +++ L S+ + + K P T G
Sbjct: 108 QEGKPSYELMEKELVDKLLNVGMWDSSYQLPIV---EKKPTATLSDAQG 153
>gi|329957332|ref|ZP_08297852.1| OmpA family protein [Bacteroides clarus YIT 12056]
gi|328523045|gb|EGF50148.1| OmpA family protein [Bacteroides clarus YIT 12056]
Length = 410
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS-IGTLKNNLLISQE 132
+ L + + + +A + +FP+ + + DS GT + N +S +
Sbjct: 305 IAPRTVFFKIGSAELSPREVMNISYLAKQMQEFPNATYTVNGYADSATGTPEFNKELSLK 364
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFA 158
RA + L++ + V
Sbjct: 365 RAQAVVDVLVKDYGIPANRLKVSADG 390
>gi|254674162|emb|CBA09946.1| hypothetical protein predicted by Glimmer/Critica [Neisseria
meningitidis alpha275]
Length = 173
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 16/171 (9%), Positives = 52/171 (30%), Gaps = 12/171 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI--VNKRFGSSLDKAEDEFQMQLQ 59
IK L + ++ C +E ++ + + + + ++ + L
Sbjct: 4 IKNT-LFVASTMILTACAAPKQEVAELPQDATYTVEQNKLGEFVFCRNEECSGFERKVLA 62
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + ++ I + L + + L+ + L + + ++ DS
Sbjct: 63 EQPVYAQTQTNLQKEEIR-VFFNLGSSHLGAEGVKTLKRVLPKLK--NTQTVYLRGWADS 119
Query: 120 IGTLKNNLLIS-QERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
IG + ++ + +++ + + + P N
Sbjct: 120 IGGRNTAINRRLAKQRAAVIGKWLRKHNVTAKIRTASS-----PACCNSDD 165
>gi|206976247|ref|ZP_03237155.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217961582|ref|YP_002340152.1| hypothetical protein BCAH187_A4221 [Bacillus cereus AH187]
gi|206745443|gb|EDZ56842.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217063458|gb|ACJ77708.1| conserved hypothetical protein [Bacillus cereus AH187]
Length = 247
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 1 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 58
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 59 TQGKEKVTDADDVKFEI 75
>gi|254787370|ref|YP_003074799.1| phosphate binding family protein [Teredinibacter turnerae T7901]
gi|237685918|gb|ACR13182.1| phosphate binding family protein [Teredinibacter turnerae T7901]
Length = 464
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 6/111 (5%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPS--TVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ L+ K L + + + P + + ++ + ++S+ RA +K
Sbjct: 347 FQPGKANLDNKALHDISRLVDYVKSLPGEPLHVQLVGFSNPEDSDNRADVLSKLRASKVK 406
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
L + G+++ + GF + ND N+R+E+ +F N +
Sbjct: 407 IELFRNGLTTAPIM---GFGSDVLVA-NDNGNTSAKNERVEVWLFNPNNKR 453
>gi|30022175|ref|NP_833806.1| hypothetical protein BC4088 [Bacillus cereus ATCC 14579]
gi|228960354|ref|ZP_04122007.1| hypothetical protein bthur0005_38220 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229047782|ref|ZP_04193362.1| hypothetical protein bcere0027_37590 [Bacillus cereus AH676]
gi|229081346|ref|ZP_04213849.1| hypothetical protein bcere0023_39800 [Bacillus cereus Rock4-2]
gi|229111563|ref|ZP_04241114.1| hypothetical protein bcere0018_38080 [Bacillus cereus Rock1-15]
gi|229129369|ref|ZP_04258340.1| hypothetical protein bcere0015_38120 [Bacillus cereus BDRD-Cer4]
gi|229146664|ref|ZP_04275031.1| hypothetical protein bcere0012_38050 [Bacillus cereus BDRD-ST24]
gi|229180369|ref|ZP_04307712.1| hypothetical protein bcere0005_37140 [Bacillus cereus 172560W]
gi|29897732|gb|AAP11007.1| IG hypothetical 17224 [Bacillus cereus ATCC 14579]
gi|228603116|gb|EEK60594.1| hypothetical protein bcere0005_37140 [Bacillus cereus 172560W]
gi|228636834|gb|EEK93297.1| hypothetical protein bcere0012_38050 [Bacillus cereus BDRD-ST24]
gi|228653974|gb|EEL09841.1| hypothetical protein bcere0015_38120 [Bacillus cereus BDRD-Cer4]
gi|228671945|gb|EEL27238.1| hypothetical protein bcere0018_38080 [Bacillus cereus Rock1-15]
gi|228701968|gb|EEL54451.1| hypothetical protein bcere0023_39800 [Bacillus cereus Rock4-2]
gi|228723574|gb|EEL74939.1| hypothetical protein bcere0027_37590 [Bacillus cereus AH676]
gi|228799378|gb|EEM46342.1| hypothetical protein bthur0005_38220 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 248
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 2 MMKKLIITLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 59
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 60 TQGKEKVTDADDVKFEI 76
>gi|253315453|ref|ZP_04838666.1| hypothetical protein SauraC_04742 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
Length = 118
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFSKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|227328846|ref|ZP_03832870.1| hypothetical protein PcarcW_16508 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 192
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC S D S++ A+ L
Sbjct: 1 MLKKLFFPLLAVILLAGCAAKSNTLNITPKISVPSQDPTLMGVTISINGADQRADQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G +IT + F
Sbjct: 60 ---KVNRDGQLITLTPSRDLRF 78
>gi|218899251|ref|YP_002447662.1| putative lipoprotein [Bacillus cereus G9842]
gi|218543071|gb|ACK95465.1| putative lipoprotein [Bacillus cereus G9842]
Length = 247
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 1 MMKKLIITLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 58
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 59 TQGKEKVTDADDVKFEI 75
>gi|116872235|ref|YP_849016.1| secreted protein with hydrophobic anchor, putative [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|116741113|emb|CAK20233.1| secreted protein with hydrophobic anchor, putative [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 218
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 10/99 (10%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Query: 1 MIKELG-LSMFIMTTISGCGLASREKKKVFLHKSNDT--DIVNKRFGSSLDKAEDEFQMQ 57
M K + + + ++ ++GC + K ++ + ++ G +E + +
Sbjct: 1 MKKIIFTIMLSLILVLAGCADVTNTVKVDKKGEATISFDVDISTVAGIFASGYSNELEAK 60
Query: 58 LQDTGIVVSRIGDMIT-CYIPVHVSFVSEVFLEKKFLPM 95
L++ G V + + + + ++ ++ + +
Sbjct: 61 LKEAGFTVDKKSNTSYHIEKRLDKNETTKSNMKPEDYGV 99
>gi|75763023|ref|ZP_00742814.1| Hypothetical protein RBTH_02670 [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74489485|gb|EAO52910.1| Hypothetical protein RBTH_02670 [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 248
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 2 MMKKLIITLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 59
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 60 TQGKEKXTDADDVKFEI 76
>gi|331091756|ref|ZP_08340588.1| hypothetical protein HMPREF9477_01231 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402655|gb|EGG82222.1| hypothetical protein HMPREF9477_01231 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 104
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 33/104 (31%), Gaps = 3/104 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF---GSSLDKAEDEFQMQ 57
M K+ + + ++GC + +E + ++ ++N K +
Sbjct: 1 MTKKFFVLLVCSMVLTGCASSKQENTQKQEFVREESSLINSPEMMNYKYRVKLTGKSNNA 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
Q + V +T + S + + F + IA
Sbjct: 61 KQKSYYTVLTNDKSLTFETVDRKFWSSSIEDKNDFYIVAHGIAE 104
>gi|301155836|emb|CBW15304.1| putative lipoprotein precursor [Haemophilus parainfluenzae T3T1]
Length = 208
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 23/76 (30%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L+ F + +SGC ++ L + ++ + Q
Sbjct: 1 MKKILLTTFALVVLSGCAHRQTADEQQALENPSIQQGQHQVLQPEDRIVRPDIYTDYQPE 60
Query: 62 GIVVSRIGDMITCYIP 77
V R G
Sbjct: 61 RTEVLREGRYTLINFS 76
>gi|283770558|ref|ZP_06343450.1| lipoprotein [Staphylococcus aureus subsp. aureus H19]
gi|283460705|gb|EFC07795.1| lipoprotein [Staphylococcus aureus subsp. aureus H19]
Length = 307
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 25/92 (27%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ + F+ L+ K
Sbjct: 61 HKDKIAKREEQ---------FFMDNFGLKVKA 83
>gi|291455983|ref|ZP_06595373.1| putative sugar ABC transporter substrate-binding protein
[Bifidobacterium breve DSM 20213]
gi|291382392|gb|EFE89910.1| putative sugar ABC transporter substrate-binding protein
[Bifidobacterium breve DSM 20213]
Length = 440
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 39/115 (33%), Gaps = 6/115 (5%)
Query: 1 MIKELGLS------MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
M K +G + + + +++ CG +S ++ T ++ G + + A F
Sbjct: 1 MRKTIGKAMAATTSLALALSMAACGSSSENAEEATKVGGTITIWTWEQPGKAFEAAAKGF 60
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ T + V +G+ L + I ++KFP
Sbjct: 61 EEANPGTTVKVENVGNPAIWDKITTGLAAGGQGLPDIMNVGIDYIGGYMDKFPDA 115
>gi|242310642|ref|ZP_04809797.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239523040|gb|EEQ62906.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 242
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 27/214 (12%), Positives = 63/214 (29%), Gaps = 31/214 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+ L +++ M IS + L + + K + + + + +
Sbjct: 22 MMIFLLIAVVYMVVISKAEKRLATQNAELLELNKQMSDIAKTYKNLQAELYGDLVAEFSG 81
Query: 61 TGIVVS---RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT---ILNKFPSTV---- 110
+ + + P + + ++ +F +L + P
Sbjct: 82 DLEKWNAEIDEDNTVRFREPEILFDQGKKEVKLRFKQILDDFFPRYVNILTQPKYKGDIE 141
Query: 111 -IAIQSHTDSIGTLKNNLLI--------SQERADVIKSYLIQRGVSSNR------FISVR 155
I I+ HT + +L SQ RA + Y +
Sbjct: 142 EIRIEGHTSTEWQNAKSLEDRYLGNAELSQARALEVLKYCFNNTQIKEDKQWLIGVLRAN 201
Query: 156 GFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
G ++ P+ + ++R+E + + N K
Sbjct: 202 GLSFAKPL------ESVELSRRVEFRAITKSNQK 229
>gi|187929653|ref|YP_001900140.1| superoxide dismutase copper/zinc binding [Ralstonia pickettii
12J]
gi|309781579|ref|ZP_07676314.1| copper/zinc superoxide dismutase [Ralstonia sp. 5_7_47FAA]
gi|187726543|gb|ACD27708.1| superoxide dismutase copper/zinc binding [Ralstonia pickettii
12J]
gi|308919684|gb|EFP65346.1| copper/zinc superoxide dismutase [Ralstonia sp. 5_7_47FAA]
Length = 183
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSN---DTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L +++ + ++GC S K + ++ + GS++ + Q
Sbjct: 1 MKQLAIALAAIGLMAGCASNSASTAKAANAGDGAMTASAVLAPKSGSTVQGSVKLAQQGD 60
Query: 59 QDTGIVVSRIG 69
I V G
Sbjct: 61 NRVAIAVDISG 71
>gi|302338189|ref|YP_003803395.1| TRAP dicarboxylate transporter DctP subunit [Spirochaeta
smaragdinae DSM 11293]
gi|301635374|gb|ADK80801.1| TRAP dicarboxylate transporter, DctP subunit [Spirochaeta
smaragdinae DSM 11293]
Length = 348
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/171 (11%), Positives = 45/171 (26%), Gaps = 9/171 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + L L + + + GC +K V + G+ + E + + +
Sbjct: 1 MKRSLFLGLALSVALLGCSGKGADKDAANKSGEVAATKVVLQVGAEANPGEPQVEGMNKW 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL------PMLQLIATILNKFPSTVIAIQ 114
+V R + + + L + L + P I +
Sbjct: 61 AELVKERSNGTMELQVFPSSQLGYKAALIDQMLVGDPVISVCDAAYYADRGVPDLGIVMA 120
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
++ S A+ +K + + + + T
Sbjct: 121 PFLLKSWDDAWTIINSDWYAEQLKKLEDKGLKVITSNWI---YGERNLLTT 168
>gi|255323966|ref|ZP_05365092.1| secreted protein [Corynebacterium tuberculostearicum SK141]
gi|255299146|gb|EET78437.1| secreted protein [Corynebacterium tuberculostearicum SK141]
Length = 185
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 23/178 (12%), Positives = 52/178 (29%), Gaps = 11/178 (6%)
Query: 1 MIK-ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K L ++ + ++SGC ++ + N + + + +L
Sbjct: 1 MLKVRLAATLLVAASLSGCAAHETDRTTMAASADNSQLNPLGQANMEMKTLRPQAPSELT 60
Query: 60 DTGIVVSRIG--DMITCYIPVH---VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
T + + R + + + FV + I + I
Sbjct: 61 VTDVRIGRHEGFERVVFELDGGGTPGWFVDYAD-TPTQQGSGKTIDHSGETALNVNIDGV 119
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP----IDTNDT 168
+ G + + + I + ++ G R V G + P + N T
Sbjct: 120 VYPFEAGKDDPRIGVVDAPTEGIVTQVVNGGTYEGRCQFVIGMTSRKPYSVQVLDNPT 177
>gi|213025158|ref|ZP_03339605.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 69
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ ++ L+ + L + + L+ + + TD IG+ N +S++RA
Sbjct: 2 SDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA 61
Query: 135 DVIKSYLI 142
+ YLI
Sbjct: 62 QSVVDYLI 69
>gi|163738038|ref|ZP_02145454.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
gi|161388654|gb|EDQ13007.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
Length = 278
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 23/184 (12%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG------------IVVSRI 68
AS D+ + + + D+ + QL+ G I+
Sbjct: 99 ASDISPADAQQAKGDSGVEQDKDREAADEQFRALEEQLKGRGGESMVSIEMAQHIITRVT 158
Query: 69 GDMITCYI----PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT-- 122
+ + + + F ++ + + + IAI H S
Sbjct: 159 DEGLVVELFDTEESPLFKEGTAEPTLLFRDIV-KMVSRVTGVVENNIAIGGHIRSHAVVV 217
Query: 123 -LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
+S RAD + L G S R V G A + D+N N R+EI
Sbjct: 218 ANNPVWELSHARADATRVMLESGGTRSKRMHRVTGHADRKLTDSNPMS---ARNNRVEII 274
Query: 182 IFPR 185
+ +
Sbjct: 275 LLRK 278
>gi|322834049|ref|YP_004214076.1| Uncharacterized lipoprotein [Rahnella sp. Y9602]
gi|321169250|gb|ADW74949.1| Uncharacterized lipoprotein [Rahnella sp. Y9602]
Length = 192
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + + ++GC ++ D + S++ A+ L
Sbjct: 1 MLKKIIFPVLALFMLAGCATSTNTLDVSPKIVLPSQDPTLQGITISINGADQRQDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G +I+ + F
Sbjct: 60 ---KVNRDGQLISLTPSRDLRF 78
>gi|319653337|ref|ZP_08007438.1| hypothetical protein HMPREF1013_04055 [Bacillus sp. 2_A_57_CT2]
gi|317394986|gb|EFV75723.1| hypothetical protein HMPREF1013_04055 [Bacillus sp. 2_A_57_CT2]
Length = 345
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 48/142 (33%), Gaps = 10/142 (7%)
Query: 2 IKELGL---SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L L ++ +M T++ CG + + + +S+ + + + + + Q L
Sbjct: 4 MKKLFLGALALVMMFTLAACGNSEKTEGSGSGAESDGVQEITIKIAHVVAENTPKHQGAL 63
Query: 59 QDTGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ ++ I + P F + ++ ++ + P + +
Sbjct: 64 KMKEVIEKESDGKIKVQVYPNSSLFGD----KDEYQNLVANNVQFI--LPDMSKLVGNDP 117
Query: 118 DSIGTLKNNLLISQERADVIKS 139
L S E A+
Sbjct: 118 GFNIPAMPFLFESDEAANAFWD 139
>gi|306825686|ref|ZP_07459025.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. oral
taxon 071 str. 73H25AP]
gi|304432047|gb|EFM35024.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. oral
taxon 071 str. 73H25AP]
Length = 238
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 10/107 (9%), Positives = 29/107 (27%), Gaps = 2/107 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + LS + T++ C + + ++ + S ++ + ++ +
Sbjct: 1 MKKRYIVLSGLLAVTLAACSQETPKNEENTQKTEQTSQPEGTVGSKSQASSQKKAEVVNK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
+ D I + L + +
Sbjct: 61 GDHYSIQGKYDEIVVANKHYPLSKDYNPGENPTAKAELLKLIAAMQA 107
>gi|269120972|ref|YP_003309149.1| hypothetical protein Sterm_2365 [Sebaldella termitidis ATCC
33386]
gi|268614850|gb|ACZ09218.1| protein of unknown function DUF534 [Sebaldella termitidis ATCC
33386]
Length = 331
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 9/80 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG---------SSLDKAE 51
M K + L M + + GCG E K + +T +K + +LDKA
Sbjct: 1 MKKIMFLVMMLSLILIGCGDKKEEAKTGTDTANTETKADDKVYKIGITQIVSHQALDKAR 60
Query: 52 DEFQMQLQDTGIVVSRIGDM 71
+ F+ L++ GI
Sbjct: 61 EGFKDALEEAGIKAEYDEQN 80
>gi|171779676|ref|ZP_02920632.1| hypothetical protein STRINF_01513 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281778|gb|EDT47212.1| hypothetical protein STRINF_01513 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 264
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Query: 2 IKELGLSMFIMTT---ISGCGLASREKKKVFLHK---SNDTDIVNKRFGSSLDKAEDEFQ 55
+K + L + ++ ++GCG S +K+ + ++ ++ R+ + DKA +
Sbjct: 1 MKRMFLVISLLFVSIIVAGCGTTSTKKEVKYYDNDFVTDLGKALDARWTYTDDKANADV- 59
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ + G + ++ + F L++ L + + L
Sbjct: 60 -VMTEEGYETATQTELDVIEKYQDLKFKD-SKLKEAALAYINELKNGLK 106
>gi|288549990|ref|ZP_05968893.2| YajG protein [Enterobacter cancerogenus ATCC 35316]
gi|288316900|gb|EFC55838.1| YajG protein [Enterobacter cancerogenus ATCC 35316]
Length = 210
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + + ++GC D S++ A+ L
Sbjct: 19 MLKKIFFPLVALFMLAGCATPPTTIDVTPKITLPQQDPSLMGVTISINGADQRQDQALA- 77
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R +T + F
Sbjct: 78 ---KVTRDNQQVTLTASRDLRF 96
>gi|225388489|ref|ZP_03758213.1| hypothetical protein CLOSTASPAR_02225 [Clostridium asparagiforme
DSM 15981]
gi|225045420|gb|EEG55666.1| hypothetical protein CLOSTASPAR_02225 [Clostridium asparagiforme
DSM 15981]
Length = 366
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Query: 1 MIKELGLSMFIMTTI--SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
M K++ L+ + + CG E K T+ V + + E E
Sbjct: 10 MKKQIALATAAAMVLGLAACGSKPAETKPAETAAQTKTEAVTEAEKKETEPKETE 64
>gi|228902599|ref|ZP_04066750.1| hypothetical protein bthur0014_37750 [Bacillus thuringiensis IBL
4222]
gi|228967123|ref|ZP_04128159.1| hypothetical protein bthur0004_39270 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228792492|gb|EEM40058.1| hypothetical protein bthur0004_39270 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228857040|gb|EEN01549.1| hypothetical protein bthur0014_37750 [Bacillus thuringiensis IBL
4222]
Length = 248
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 2 MMKKLIITLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 59
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 60 TQGKEKVTDADDVKFEI 76
>gi|229019301|ref|ZP_04176127.1| hypothetical protein bcere0030_38080 [Bacillus cereus AH1273]
gi|229025547|ref|ZP_04181955.1| hypothetical protein bcere0029_38430 [Bacillus cereus AH1272]
gi|228735729|gb|EEL86316.1| hypothetical protein bcere0029_38430 [Bacillus cereus AH1272]
gi|228741986|gb|EEL92160.1| hypothetical protein bcere0030_38080 [Bacillus cereus AH1273]
Length = 288
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 47 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAI--KVAVQTNPKEIKPGEKTEVQALV 104
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 105 TQGKEKVTDADDVKFEI 121
>gi|229152291|ref|ZP_04280484.1| hypothetical protein bcere0011_38300 [Bacillus cereus m1550]
gi|228631253|gb|EEK87889.1| hypothetical protein bcere0011_38300 [Bacillus cereus m1550]
Length = 248
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 2 MMKKLIITLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 59
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 60 TQGKEKVTDADDVKFEI 76
>gi|294782985|ref|ZP_06748310.1| outer membrane protein [Fusobacterium sp. 1_1_41FAA]
gi|294480677|gb|EFG28453.1| outer membrane protein [Fusobacterium sp. 1_1_41FAA]
Length = 141
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 72 ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQ 131
I + ++ ++ ML + + + + + I+ HTDS+G+ + N+ +S+
Sbjct: 62 IVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQN-NYELTIEGHTDSVGSNQYNIGLSR 120
Query: 132 ERADVIKSYLIQRGVSSNRF 151
RA+ +K+ LI+ G+ +R
Sbjct: 121 RRAEAVKAKLIEFGLPEDRI 140
>gi|325690634|gb|EGD32637.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sanguinis SK115]
Length = 272
Score = 39.6 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 11/98 (11%), Positives = 31/98 (31%), Gaps = 4/98 (4%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K +L + + C ++ + K+ + DK + M
Sbjct: 11 MKYSKLIFLAASVLVLGACSSGKDTTGDSSDKQAASSTSTVKKQDAEKDKNSSQ-DMTPS 69
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPML 96
+ + + +VS+ + ++ K+ +L
Sbjct: 70 SDSTDTKKEQNHEAKTLDQNVSYNGSYYSVKGKYDEIL 107
>gi|297616419|ref|YP_003701578.1| fumarate reductase/succinate dehydrogenase flavoprotein domain
protein [Syntrophothermus lipocalidus DSM 12680]
gi|297144256|gb|ADI01013.1| fumarate reductase/succinate dehydrogenase flavoprotein domain
protein [Syntrophothermus lipocalidus DSM 12680]
Length = 513
Score = 39.6 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 50/158 (31%), Gaps = 5/158 (3%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L L + +M T+ GCG A EK++ + G+ + + Q ++
Sbjct: 10 LFLVLAMMFTLVGCGGAGSEKQEG---SALTKQADVVVVGAGMAGMSAAIEAASQGAKVI 66
Query: 65 VSRIGDMITCYIP-VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL 123
+ ++ F E ++K+ + + +F + + +
Sbjct: 67 LLEKQSVLGGSTNFAEGIFGCESPIQKEMGITVNQEELLREEFEFSNYRVDGNLWKDVMK 126
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISV-RGFAYK 160
+ I +K + + N+ V GF
Sbjct: 127 HSGEDIQWLMDMGVKFETVTSTGAGNKTWHVYEGFGET 164
>gi|52078924|ref|YP_077715.1| hypothetical protein BL01766 [Bacillus licheniformis ATCC 14580]
gi|52784298|ref|YP_090127.1| hypothetical protein BLi00478 [Bacillus licheniformis ATCC 14580]
gi|319648771|ref|ZP_08002982.1| hypothetical protein HMPREF1012_04021 [Bacillus sp. BT1B_CT2]
gi|52002135|gb|AAU22077.1| hypothetical protein BL01766 [Bacillus licheniformis ATCC 14580]
gi|52346800|gb|AAU39434.1| hypothetical protein BLi00478 [Bacillus licheniformis ATCC 14580]
gi|317389190|gb|EFV70006.1| hypothetical protein HMPREF1012_04021 [Bacillus sp. BT1B_CT2]
Length = 163
Score = 39.6 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ + F++ ++GC A +++ S I N S+ K + ++ L
Sbjct: 1 MKKRTVLFFLLIWLAGCASAQEAEEQTKWVNSEQKAIENGIRYESITKDDIIDKIDLNGE 60
Query: 62 GIVVSRIGD 70
+VV R GD
Sbjct: 61 QVVVFRFGD 69
>gi|241767723|ref|ZP_04765343.1| protein of unknown function DUF748 [Acidovorax delafieldii 2AN]
gi|241361290|gb|EER57853.1| protein of unknown function DUF748 [Acidovorax delafieldii 2AN]
Length = 605
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 5/55 (9%), Positives = 13/55 (23%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ L + L +A L + P+ + + +
Sbjct: 448 ELSSVAFAPGSATLTPEARQSLDKVAKALTERPALKLTVTGTASLAREREALQRE 502
>gi|229075796|ref|ZP_04208773.1| hypothetical protein bcere0024_38060 [Bacillus cereus Rock4-18]
gi|229098559|ref|ZP_04229500.1| hypothetical protein bcere0020_37880 [Bacillus cereus Rock3-29]
gi|229117585|ref|ZP_04246957.1| hypothetical protein bcere0017_38590 [Bacillus cereus Rock1-3]
gi|228665905|gb|EEL21375.1| hypothetical protein bcere0017_38590 [Bacillus cereus Rock1-3]
gi|228684881|gb|EEL38818.1| hypothetical protein bcere0020_37880 [Bacillus cereus Rock3-29]
gi|228707348|gb|EEL59544.1| hypothetical protein bcere0024_38060 [Bacillus cereus Rock4-18]
Length = 243
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 2 MMKKLIITLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 59
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 60 TQGKEKVTDADDVKFEI 76
>gi|254506709|ref|ZP_05118849.1| outer membrane assembly lipoprotein YfgL [Vibrio parahaemolyticus
16]
gi|219550290|gb|EED27275.1| outer membrane assembly lipoprotein YfgL [Vibrio parahaemolyticus
16]
Length = 387
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 9/96 (9%), Positives = 29/96 (30%), Gaps = 4/96 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASRE----KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M+K+ + ++GC + + + + G+ +D +
Sbjct: 4 MLKKALAVAVLTGVLAGCASEEDTIVMAPVPQVDSEFTPSGVWSNSIGNGVDTYYSKLSP 63
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ + V+ + P + E ++ +
Sbjct: 64 EYAYGKVFVASRDGKVKALDPETGKTLWEQTIKAEG 99
>gi|228922840|ref|ZP_04086138.1| hypothetical protein bthur0011_38250 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228836895|gb|EEM82238.1| hypothetical protein bthur0011_38250 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 248
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 2 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 59
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 60 TQGKEKVTDADDVKFEI 76
>gi|88798301|ref|ZP_01113887.1| hypothetical protein MED297_13622 [Reinekea sp. MED297]
gi|88779077|gb|EAR10266.1| hypothetical protein MED297_13622 [Reinekea sp. MED297]
Length = 232
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 61/199 (30%), Gaps = 23/199 (11%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + ++ + + + + R D +EF+ LQ G
Sbjct: 20 LMAGLMMVFLLVAIVFMVNAEIERNKIRDVAVLYDKLRTQLYQD-LVNEFEPDLQTWGAE 78
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPML-QLIATILN-----KFPS--TVIAIQSH 116
+ I P + E L+ +F +L LN K+ + I+ H
Sbjct: 79 I-NPDLSIRFGRPELIFDKGENDLKDEFEVILSDFFPRYLNIIASEKYREDIAEVRIEGH 137
Query: 117 TDSIGTLKNNLLI-------SQERADVIKSYLIQRGVSS------NRFISVRGFAYKYPI 163
T S + SQ R +L+Q ++ G + PI
Sbjct: 138 TSSGWVSRGEDEAYILNMGLSQARTRSTLEFLLQLPAVQAEKAWLKEHMTANGLSSSKPI 197
Query: 164 DTNDTKVGRQNNQRIEIQI 182
+ + ++R+E ++
Sbjct: 198 LQTSGEEDSERSRRVEFRL 216
>gi|121582849|ref|YP_973291.1| hypothetical protein Pnap_4266 [Polaromonas naphthalenivorans CJ2]
gi|120596111|gb|ABM39549.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2]
Length = 235
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 60/195 (30%), Gaps = 28/195 (14%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
++ ++ + +A + + K + + + G+ V
Sbjct: 27 LMTALMVLFLVVMAVALLAVTRTVSAREALEAQHKKDVDNCM---AQAVTAAERHKGVKV 83
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST--------VIAIQSHT 117
+I +F L + +L+ L T + ++ +T
Sbjct: 84 DLDRRVIDFGDRARFAF-GSSVLAPEQEAVLRRFVPELLSMAQTPSCKRVLKRVVVEGYT 142
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQ----------RGVSSNRFISVRGFAYKYPIDTND 167
D GT NL +S R+ + + + + V GF N
Sbjct: 143 DRAGTYLGNLNLSLMRSQRVLCAMFTTSGADALTEAQKDAVRDVFLVGGF------AFNS 196
Query: 168 TKVGRQNNQRIEIQI 182
+K + ++R+E+++
Sbjct: 197 SKDTAEESRRVEMRL 211
>gi|266620772|ref|ZP_06113707.1| putative sugar-binding periplasmic protein [Clostridium hathewayi
DSM 13479]
gi|288867591|gb|EFC99889.1| putative sugar-binding periplasmic protein [Clostridium hathewayi
DSM 13479]
Length = 444
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 8/68 (11%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 1 MIKELGLSMFIMTT---ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L L + ++GCG + + + ++ + ++ + +
Sbjct: 1 MKKILSLVLASAMVASSLAGCGSSKTAETQAPTTQAPAESAAPEGSDAAPEAPAETVAAG 60
Query: 58 LQDTGIVV 65
+ G +
Sbjct: 61 AIEDGAEL 68
>gi|210614259|ref|ZP_03290130.1| hypothetical protein CLONEX_02343 [Clostridium nexile DSM 1787]
gi|210150743|gb|EEA81752.1| hypothetical protein CLONEX_02343 [Clostridium nexile DSM 1787]
Length = 204
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 15/153 (9%), Positives = 42/153 (27%), Gaps = 5/153 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ + + + I+GC K + ++ +++ + + K E +
Sbjct: 4 LKKCMVLLLCILLITGCSNKKGTNGKGVNNTNSIEKVIDNQIANEDGKTETTESEKASSD 63
Query: 62 GIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATIL----NKFPSTVIAIQSH 116
I D I+ V + + + L + M+ + ++ I +
Sbjct: 64 VESNKDIEDTISGAENVRDTDETVDYDLTQMSSDMVYATVYQMMVTPEEYEGKTFRIDGN 123
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ + Q
Sbjct: 124 FYATYYEATKKYYFYCIIQDATACCAQGMEFIW 156
>gi|115377102|ref|ZP_01464317.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
gi|310822806|ref|YP_003955164.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|115365877|gb|EAU64897.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
gi|309395878|gb|ADO73337.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
Length = 381
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 9/126 (7%)
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ----LIATILNKF---PSTVIAIQSH 116
V + L L IA ++++ + + + H
Sbjct: 239 SVELFPWQVDIPHEEVNFASGSAELAVGERGKLDHSHARIAEAVSRYGRFAALRLYVLGH 298
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
TDS+G +N +S +RA I +Y +RG+ I GF + P + N+
Sbjct: 299 TDSVGATASNRELSLQRARSIAAYFHKRGLRLP--IFYEGFGEQAPAVMTPDETAEVGNR 356
Query: 177 RIEIQI 182
R E +
Sbjct: 357 RAEYIL 362
>gi|315143723|gb|EFT87739.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
Length = 244
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 49/201 (24%), Gaps = 34/201 (16%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L + ++ C ++++ + + T + +K +
Sbjct: 1 MKKIVLLSISLIMLAACSNETKKEVETKETSATVTSTTKDSSSRTKEKESSLTTETSNIS 60
Query: 62 GIVVSRIGDMIT----------CYIPVHVSFVS-EVFLEKKFLP---------------- 94
V ++ F++ + +
Sbjct: 61 ASSVENETQTQVSLGDFVGGWGIPQSDNLFFINADGTISSATQSNVPLQNLSFSVDTNGN 120
Query: 95 -----MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+L A L K ++ S + ER + + +
Sbjct: 121 QTMSYVLNNTAGTLVKNIDGSLSAGGQVYSY-LGNITMEQLIERNNQGQQPPVPTQNQDE 179
Query: 150 RFISVRGFAYKYPIDTNDTKV 170
+ + G P N+ +
Sbjct: 180 QPVVANGQ-ESQPKSENNQEQ 199
>gi|300871659|ref|YP_003786532.1| hypothetical protein BP951000_2053 [Brachyspira pilosicoli
95/1000]
gi|300689360|gb|ADK32031.1| hypothetical protein BP951000_2053 [Brachyspira pilosicoli
95/1000]
Length = 321
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 23/80 (28%), Gaps = 4/80 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ L + C S + D+ + D + Q
Sbjct: 1 MYKKIVLLLLCFLFAVSCSSPSNPDN----VNNGDSGQTGGSTVTPPDVTPPVLDEEAQK 56
Query: 61 TGIVVSRIGDMITCYIPVHV 80
I +S+ I+ I +
Sbjct: 57 YAIDISQDDAEISKQIEEKL 76
>gi|193222184|gb|ACF16363.1| outer membrane protein A [Riemerella anatipestifer]
gi|194295638|gb|ACF40846.1| outer membrane protein [Riemerella anatipestifer]
gi|194295642|gb|ACF40848.1| outer membrane protein [Riemerella anatipestifer]
gi|194295644|gb|ACF40849.1| outer membrane protein [Riemerella anatipestifer]
Length = 270
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 17/145 (11%), Positives = 42/145 (28%), Gaps = 15/145 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ K ++ + ++ +
Sbjct: 140 GCPWPDTDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGA--------------L 185
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + HTD G NL +S+ERA
Sbjct: 186 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHTDVKGNANYNLKLSRERAAS 245
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKY 161
+ + ++ + + +G
Sbjct: 246 VVA-ALEARGVNPSQLKSKGVGSAE 269
>gi|90413934|ref|ZP_01221919.1| hypothetical protein P3TCK_07711 [Photobacterium profundum 3TCK]
gi|90324996|gb|EAS41511.1| hypothetical protein P3TCK_07711 [Photobacterium profundum 3TCK]
Length = 197
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 18/74 (24%), Gaps = 1/74 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQ 59
M K L + ++GC L + L E L
Sbjct: 1 MKKHLLFMVAATAFLAGCSSQPDAVNSYLLPAGAQSITSQIGSNQPLLVIRPVEMAEHLA 60
Query: 60 DTGIVVSRIGDMIT 73
TG+V +
Sbjct: 61 GTGLVYQVSDTEVV 74
>gi|328946369|gb|EGG40511.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sanguinis
SK1087]
Length = 272
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 11/98 (11%), Positives = 30/98 (30%), Gaps = 4/98 (4%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K +L L + + C ++ + K+ + DK
Sbjct: 11 MKYRKLILLAAFVLVLGACSSGKDTTGDSSDKQAASSTGTVKKQDAEKDK-NSSQDTTTS 69
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPML 96
+ + + +VS+ + ++ K+ +L
Sbjct: 70 SDSTDTKKEQNHEAKTLDQNVSYNGSYYSIKGKYDEIL 107
>gi|229078184|ref|ZP_04210759.1| hypothetical protein bcere0023_8590 [Bacillus cereus Rock4-2]
gi|228705130|gb|EEL57541.1| hypothetical protein bcere0023_8590 [Bacillus cereus Rock4-2]
Length = 201
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 3/109 (2%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDI-VNKRFGSSLDKAEDEFQMQ 57
M K + L + M +S C + + K+K + D I V + SS K E + +
Sbjct: 1 MKKYILYPLMLLTMLFLSACSNSVQPKEKNDVQSIKDVAIKVPENIFSSSKKNETINEDE 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ ++ I S S+ + LQ + + +
Sbjct: 61 MKQNIKNYIDYSWELSENIIPLASTNSDKSFTESDREKLQKLIDLAKQN 109
>gi|154252498|ref|YP_001413322.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans
DS-1]
gi|154156448|gb|ABS63665.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1]
Length = 277
Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 7/101 (6%)
Query: 80 VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ L + ++ I + +++ HTD+ G+ N + Q RAD + +
Sbjct: 181 YFGFDKYNLTPEAQSVIDQIVAE----TTGPLSVIGHTDTSGSSAYNQALGQRRADSVSN 236
Query: 140 YLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEI 180
L +G S V N+R +
Sbjct: 237 ALTAQG---KELCSAVSRGETELAVQTGDGVREPLNRRAVV 274
>gi|295677467|ref|YP_003605991.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295437310|gb|ADG16480.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 340
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 40/107 (37%), Gaps = 9/107 (8%)
Query: 84 SEVFLEKKFLPMLQLIA-TILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKSYL 141
+ K + +A IL + S + + H D IG+ + ++RA ++ L
Sbjct: 229 GSRDMTGKGQAEISRLAEKILAENASLEAVTVIGHADLIGSDAAAQKLGEQRAMTVRRML 288
Query: 142 IQRGVSSNRFISVRGFAYKYPIDTNDT------KVGRQNNQRIEIQI 182
I++ I+ P+ + + N+R+ +++
Sbjct: 289 IEQ-GVPTLKITAESAGNSDPVVAECSGTMQRKIACNEPNRRVVVRV 334
>gi|229031732|ref|ZP_04187725.1| hypothetical protein bcere0028_37850 [Bacillus cereus AH1271]
gi|228729616|gb|EEL80603.1| hypothetical protein bcere0028_37850 [Bacillus cereus AH1271]
Length = 252
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 6 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 63
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 64 TQGKEKVTDADDVKFEI 80
>gi|7228710|gb|AAF42589.1|AF226440_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
gi|222107900|gb|ACM44970.1| Gna2132 [Neisseria meningitidis]
Length = 480
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 22/87 (25%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPAAPVVAEKETEVKEDAPQAGSQG 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF 87
G ++ + +
Sbjct: 61 QGAPSTQGSQDMAAVSAENTGNGGSAT 87
>gi|81429389|ref|YP_396390.1| phosphate ABC transporter substrate-binding protein [Lactobacillus
sakei subsp. sakei 23K]
gi|78611032|emb|CAI56085.1| Putative phosphate ABC transporter, substrate binding lipoprotein
precursor [Lactobacillus sakei subsp. sakei 23K]
Length = 294
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 12/111 (10%), Positives = 33/111 (29%), Gaps = 7/111 (6%)
Query: 2 IKELGLSMF----IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+K + ++ I ++GC + + + T + + +++A +Q +
Sbjct: 1 MKRISTALLSIGVIALLLAGCQGKQANQGESKEQSAKITAVGSTALQPLVEQAGATYQTK 60
Query: 58 LQDTGIVVSRIGDMITC-YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
I V G + + + + + A L
Sbjct: 61 HAGIDITVQGGGSGTGLAQVSDGSVTIGNSDIFAEEKAGIN--AKQLVDHK 109
>gi|229018737|ref|ZP_04175588.1| VanW [Bacillus cereus AH1273]
gi|229024980|ref|ZP_04181409.1| VanW [Bacillus cereus AH1272]
gi|228736315|gb|EEL86881.1| VanW [Bacillus cereus AH1272]
gi|228742557|gb|EEL92706.1| VanW [Bacillus cereus AH1273]
Length = 303
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 49/169 (28%), Gaps = 21/169 (12%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K + + + + +SGCG + + +DI + D D + TG
Sbjct: 6 KGILVGVLCVAVVSGCGAKVSDV-------ALVSDIGGNVVEAKADVQ-DSISLVDARTG 57
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
V + + F E KF + +A+ + K +
Sbjct: 58 TEVKK------LDLSSLGYFEDEA----KFKKSVTKVASEVGKSVDKKMVPSRIAPDGSW 107
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +++ L S+ + + K PI T G
Sbjct: 108 QEGKPSYELMEKELVDKLLNVGMWDSSYQLPIV---EKKPIATLSDAQG 153
>gi|229140824|ref|ZP_04269369.1| hypothetical protein bcere0013_39180 [Bacillus cereus BDRD-ST26]
gi|229198212|ref|ZP_04324920.1| hypothetical protein bcere0001_37420 [Bacillus cereus m1293]
gi|228585231|gb|EEK43341.1| hypothetical protein bcere0001_37420 [Bacillus cereus m1293]
gi|228642614|gb|EEK98900.1| hypothetical protein bcere0013_39180 [Bacillus cereus BDRD-ST26]
Length = 252
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 6 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 63
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 64 TQGKEKVTDADDVKFEI 80
>gi|227113462|ref|ZP_03827118.1| hypothetical protein PcarbP_10887 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 192
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC S D S++ A+ L
Sbjct: 1 MLKKLFFPLLAVILLAGCAAKSNTLNISPKISLPSQDPTLMGVTISINGADQRADQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G +IT + F
Sbjct: 60 ---KVNRDGQLITLTPSRDLRF 78
>gi|289937583|ref|YP_003482185.1| beta-lactamase domain protein [Natrialba magadii ATCC 43099]
gi|289533274|gb|ADD07623.1| beta-lactamase domain protein [Natrialba magadii ATCC 43099]
Length = 386
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 2 IKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
+K L L + M ++GC + +++ + G+ D A D
Sbjct: 1 MKRLLLVVLVAAMLVLAGCADGAGTDTDESDIETDGSLEDADSNGAEDDTAAD 53
>gi|302530640|ref|ZP_07282982.1| predicted protein [Streptomyces sp. AA4]
gi|302439535|gb|EFL11351.1| predicted protein [Streptomyces sp. AA4]
Length = 251
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 5/104 (4%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPST-VIAIQSHT-DSIGTLKNNLLISQERADVIK 138
L + + +A +L P + D G L +S+ RA +
Sbjct: 148 FEPDTAQLTDQGEQAARDLAPLLRDAPDNFRYRLVGRVADGPGGRSAALKLSRNRALTVI 207
Query: 139 SYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
LI+ V +R ++V T G +++R+EI +
Sbjct: 208 RLLIREDVPPDRLLAVASAGGS---GTGADDNGGDSDRRVEITV 248
>gi|229068533|ref|ZP_04201834.1| hypothetical protein bcere0025_7470 [Bacillus cereus F65185]
gi|228714675|gb|EEL66549.1| hypothetical protein bcere0025_7470 [Bacillus cereus F65185]
Length = 201
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 3/109 (2%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDI-VNKRFGSSLDKAEDEFQMQ 57
M K + L + M +S C + + K+K + D I V + SS K E + +
Sbjct: 1 MKKYILYPLMLLTMLFLSACSNSVQPKEKNDVQSIKDVAIKVPENIFSSSKKNETINEDE 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ ++ I S S+ + LQ + + +
Sbjct: 61 MKQNIKNYIDYSWELSENIIPLASTNSDKSFTESDREKLQKLIDLAKQN 109
>gi|153871320|ref|ZP_02000522.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152072212|gb|EDN69476.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 219
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 63/185 (34%), Gaps = 23/185 (12%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSL--DKAEDEFQMQLQDTGIVVSRIGDMITCYIP 77
+ K +V N + K + + EF+ L + I P
Sbjct: 32 TTTSTKPQVITTTKNSEKTITKPTITKIIYQALLKEFKPDLPLWVAKIEPTTLTIRFQEP 91
Query: 78 VHVSFVSEVFLEKKFLPMLQ----LIATILNKFPSTV--IAIQSHTDSIGT--------L 123
+ + + L + +L IL ++ + ++I+ HT S
Sbjct: 92 TIIFQLGDDSLNTHYQFILTDFFPRYVRILKQYAHVIEAVSIEGHTSSEWRSSFSEDEAY 151
Query: 124 KNNLLISQERADVIKSYLIQRGVSSN------RFISVRGFAYKYPIDTNDTKVGRQNNQR 177
NN+ +SQ+R + Y I N + ++ G + + D ++++R
Sbjct: 152 FNNMALSQKRTRTVLEYCILLPTVKNDKEWLQQILTANGLSSSR-LMIEDGFENIEHSRR 210
Query: 178 IEIQI 182
+E +I
Sbjct: 211 VEFRI 215
>gi|299536123|ref|ZP_07049437.1| hypothetical protein BFZC1_08890 [Lysinibacillus fusiformis ZC1]
gi|298728398|gb|EFI68959.1| hypothetical protein BFZC1_08890 [Lysinibacillus fusiformis ZC1]
Length = 220
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Query: 2 IKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L LS + + ++GCG + K K + K++ + + +L E +
Sbjct: 1 MKKLILSASLILTLALTGCGESDSSKPKETVKKASLEEQSKQFIDENL---EGKTIADFT 57
Query: 60 DTGIVVSRIG--DMITCYIPVHVSFVSEVFL 88
+ + V DMI F + L
Sbjct: 58 NKLLTVKDEKLVDMIILGHKNGKQFEDDFDL 88
>gi|253687440|ref|YP_003016630.1| Uncharacterized lipoprotein [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754018|gb|ACT12094.1| Uncharacterized lipoprotein [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 192
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC S D S++ A+ L
Sbjct: 1 MLKKLFFPLLAVILLAGCAAKSNTLNITPKISLPSQDPTLMGVTISINGADQRADQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G +IT + F
Sbjct: 60 ---KVNRDGQLITLTPSRDLRF 78
>gi|170719915|ref|YP_001747603.1| hypothetical protein PputW619_0729 [Pseudomonas putida W619]
gi|169757918|gb|ACA71234.1| protein of unknown function DUF748 [Pseudomonas putida W619]
Length = 978
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 6/45 (13%), Positives = 13/45 (28%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ L L +A+ L + P + I+ +
Sbjct: 791 DLGNVSFAPGSSELSGDAQSALNKLASALKERPELRLEIEGTSAQ 835
>gi|326333276|ref|ZP_08199523.1| serine/arginine repetitive matrix protein 1 [Nocardioidaceae
bacterium Broad-1]
gi|325948920|gb|EGD41013.1| serine/arginine repetitive matrix protein 1 [Nocardioidaceae
bacterium Broad-1]
Length = 155
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 10/84 (11%), Positives = 23/84 (27%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ + ++ T++ CG A + + + S +
Sbjct: 15 IAATFTLVLTLAACGSADEDAAPSAESTDATSSVTPSVTTSPAAPVSPTTASTDLGPTLT 74
Query: 65 VSRIGDMITCYIPVHVSFVSEVFL 88
V+ GD ++ E L
Sbjct: 75 VTIDGDEVSPNAEEIHLGTGEKLL 98
>gi|325694653|gb|EGD36561.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sanguinis SK150]
Length = 272
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 30/98 (30%), Gaps = 4/98 (4%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K +L L + + C ++ + K+ + DK
Sbjct: 11 MKYSKLILLAASVLVLGACSSGKDTTGDSSDKQAASSTSTVKKQDAEKDK-NSSQDTTTS 69
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPML 96
+ + + +VS+ + ++ ++ +L
Sbjct: 70 SDSTDTKKEKNHEAKTLDQNVSYNGSYYSVKGQYDEIL 107
>gi|213962368|ref|ZP_03390631.1| hypothetical protein CAPSP0001_0091 [Capnocytophaga sputigena
Capno]
gi|213955034|gb|EEB66353.1| hypothetical protein CAPSP0001_0091 [Capnocytophaga sputigena
Capno]
Length = 352
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 22/181 (12%), Positives = 52/181 (28%), Gaps = 13/181 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ LS+ + GCG ++ + + IV S D + D
Sbjct: 1 MKKFLLSLLATVALVGCGS--KDDNEPVYSPEDGKTIVKNTMESVYDCFKKANDGSFADF 58
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
V++ T + F + +K Q L + + + + +
Sbjct: 59 LFQVNKKSGDNTWAEYLGEKFYDQYDTQKNGGFNFQE----LKGIYTWNVVTKEWSKTGS 114
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI-------DTNDTKVGRQN 174
+ + + ++ I+V + ++P+ N +
Sbjct: 115 SSNITWIFPATANGTNLNGRAVLENYQDKVITVESDSERFPVKGHIIITVDNKKVAEMKL 174
Query: 175 N 175
N
Sbjct: 175 N 175
>gi|253732127|ref|ZP_04866292.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253724134|gb|EES92863.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH959]
Length = 304
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 9/96 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ + +SGC + E K + D AE + +
Sbjct: 1 MLKKAKFILMATILLSGCSTTNNESNKETKSVPEEMDASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+++ G+ F+ L+ K ++
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKATNVI 87
>gi|260462942|ref|ZP_05811146.1| 17 kDa surface antigen [Mesorhizobium opportunistum WSM2075]
gi|259031336|gb|EEW32608.1| 17 kDa surface antigen [Mesorhizobium opportunistum WSM2075]
Length = 104
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 24/78 (30%), Gaps = 7/78 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSN-------DTDIVNKRFGSSLDKAEDE 53
M+K+ L++ + ++GC +++ I + + A
Sbjct: 2 MMKKAILAVLMTAVLAGCAQTEGQQRAGTGALIGGAGGALVGQAIGGNTKSTVIGAASGA 61
Query: 54 FQMQLQDTGIVVSRIGDM 71
+ + R GD
Sbjct: 62 LLGAVVGSATTPQRRGDE 79
>gi|167756541|ref|ZP_02428668.1| hypothetical protein CLORAM_02078 [Clostridium ramosum DSM 1402]
gi|167702716|gb|EDS17295.1| hypothetical protein CLORAM_02078 [Clostridium ramosum DSM 1402]
Length = 357
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 13/112 (11%), Positives = 38/112 (33%), Gaps = 4/112 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-- 59
+K++ + I +SGC A + + + TD ++ F ++ + +
Sbjct: 1 MKKIVALLAIALVLSGCSDAKETVENQTANDVSTTDSLDDSFYRVVNFNTNLSREDYYTA 60
Query: 60 -DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ IG + + ++ ++ + + +L + T
Sbjct: 61 FGNTMDFQTIGRELQI-LSTDHFSTNDYYMSEGQYLKTDDMNQLLKRSEDTS 111
>gi|71733521|ref|YP_276304.1| hypothetical protein PSPPH_4182 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71554074|gb|AAZ33285.1| Domain of Unknown Function (DUF748) family [Pseudomonas syringae
pv. phaseolicola 1448A]
Length = 1005
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 818 ELGSVSFAPGSSDLSAEAQSALDKLSVALKERPDLKLEIEG 858
>gi|227485606|ref|ZP_03915922.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
gi|227236472|gb|EEI86487.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
Length = 444
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 31/100 (31%), Gaps = 12/100 (12%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHK--------SNDTDIVNKRFGSSLDKA 50
M K + +++ + ++ CG A K+ + T + + A
Sbjct: 1 MKKGIKTIMALSLAFVMAACGGAKDGGKEAAEGGKEANKDTSAKLTVQAEEGWVDYYKAA 60
Query: 51 EDEFQMQLQDTGIVVSRIG--DMITCYIPVHVSFVSEVFL 88
+ + Q + I + +G D + + L
Sbjct: 61 AERVKKQFPNADIEIKTVGSFDHLDIIDATAATNEDVADL 100
>gi|226310169|ref|YP_002770063.1| hypothetical protein BBR47_05820 [Brevibacillus brevis NBRC 100599]
gi|226093117|dbj|BAH41559.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 186
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 12/104 (11%), Positives = 29/104 (27%), Gaps = 12/104 (11%)
Query: 2 IKELGL--SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L ++ ++ + GC +S + + + +
Sbjct: 1 MKKLAWLGTVLLVFLLVGCSSSSPDTVQGLGKEEAGQIAAAAVRQYYQVDVNTTDREITL 60
Query: 60 DT-------GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ G+ V I VH +E + +L
Sbjct: 61 EDPANSVYRGVPVHAILKREPVNGDVHGFH---AIIEPRSKQIL 101
>gi|254238528|ref|ZP_04931851.1| hypothetical protein PACG_04680 [Pseudomonas aeruginosa C3719]
gi|126170459|gb|EAZ55970.1| hypothetical protein PACG_04680 [Pseudomonas aeruginosa C3719]
Length = 1090
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 13/41 (31%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L +A L + P+ + ++
Sbjct: 903 DLGTVPFAAGSDELTPEAQANLDKLADALKERPALRLEVEG 943
>gi|109897796|ref|YP_661051.1| hypothetical protein Patl_1474 [Pseudoalteromonas atlantica T6c]
gi|109700077|gb|ABG39997.1| conserved hypothetical protein [Pseudoalteromonas atlantica T6c]
Length = 612
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 5/82 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK L++ + IS C L + + + G D A ++
Sbjct: 9 IKYSALALAVAFGISACSL-DGDDGEDGAQGAVGEQGEQGAQGEQGDTAGKLTRIATVPL 67
Query: 62 GIVVSRIGDMITCYIPVHVSFV 83
G V+ I + F
Sbjct: 68 GAEVT----GIFLTDEGDLFFN 85
>gi|332308884|ref|YP_004436734.1| hypothetical protein Glaag_4561 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332176213|gb|AEE25466.1| hypothetical protein Glaag_4561 [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 170
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 5/84 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASRE---KKKVFLHKSNDT-DIVNKRFGSSLDKAEDEFQMQ 57
+K++ +++ + + + C E K +L N T + K F S+ DK E + +
Sbjct: 1 MKKVLIAVVLSSLLGACASNDNEFLIDGKTYLADENGTIQLTQKEFKSATDKGEVKLLDE 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVS 81
+ VS+ I
Sbjct: 61 -DTPDVKVSKEELDIALTDEEAFF 83
>gi|68499979|gb|AAY97922.1| TrbH [Plasmid pMCBF1]
gi|133711731|gb|ABO36551.1| TrbH protein [uncultured bacterium pMCBF6]
Length = 165
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 6/80 (7%), Positives = 23/80 (28%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++++ + + +SGC S + + + + L + + + +
Sbjct: 1 MRKIVSAALLALVLSGCATTSPYGNYLAEPARVNQAQLATEAVNQLVELFPPARSRFELQ 60
Query: 62 GIVVSRIGDMITCYIPVHVS 81
G + +
Sbjct: 61 QPTPDAFGQSLVKGLRNSGY 80
>gi|187921802|ref|YP_001890834.1| hypothetical protein Bphyt_7177 [Burkholderia phytofirmans PsJN]
gi|187720240|gb|ACD21463.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
Length = 151
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 28/83 (33%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ + + ++ C A +++++ N+T++ + +++D T
Sbjct: 1 MKKTAVFALVALVLTACSSAEKQEQQEQKFLHNETNLAAAQRNAAVDCQPANCDAAWALT 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVS 84
+ + D
Sbjct: 61 KRYIEQHSDTAVTRADAVAIDTD 83
>gi|291541602|emb|CBL14712.1| hypothetical protein RBR_02850 [Ruminococcus bromii L2-63]
Length = 198
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/193 (10%), Positives = 50/193 (25%), Gaps = 35/193 (18%)
Query: 1 MIKELGLSMFIMTTIS--GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + L++ + +S GCG + + + + + + + E+ + +
Sbjct: 1 MKKLIALALTAVFAVSLVGCGTTAESSSNTDIKAETTESVTTEIPTTVQETTKAEYDLAI 60
Query: 59 QDTGIVVS---------------------RIGDMITCY---IPVHVSFVSEVFLEKKFLP 94
++T + D + + + +E +
Sbjct: 61 ENTLKDIKYCTPSQFETKGTSGLIFNHKSPENDNLLVSYTELSDDILLYTES----QANE 116
Query: 95 MLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+L I + + S + S + V S
Sbjct: 117 LLDSIVEGMK--GDRDFELSSKKYLEIASCYGIEFSYKMEGVYAHTYAFLWNDGAYNFS- 173
Query: 155 RGFAYKYPIDTND 167
++ PI D
Sbjct: 174 --YSSTEPISEED 184
>gi|238893381|ref|YP_002918115.1| hypothetical protein KP1_1264 [Klebsiella pneumoniae NTUH-K2044]
gi|262042470|ref|ZP_06015629.1| lipoprotein YajG [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|330011530|ref|ZP_08307116.1| hypothetical protein HMPREF9538_04818 [Klebsiella sp. MS 92-3]
gi|238545697|dbj|BAH62048.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259040174|gb|EEW41286.1| lipoprotein YajG [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|328534147|gb|EGF60782.1| hypothetical protein HMPREF9538_04818 [Klebsiella sp. MS 92-3]
Length = 192
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + M ++GC + D S++ A+ L
Sbjct: 1 MLKKILFPLVAMFMLAGCATPPTTIEVSPKITLPQQDPSLMGVTVSINGADQRPDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQLVTLTASRDLRF 78
>gi|320330010|gb|EFW85997.1| hypothetical protein PsgRace4_10297 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 990
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 803 ELGSVSFAPGSSDLSAEAQSALDKLSVALKERPDLKLEIEG 843
>gi|320322521|gb|EFW78614.1| hypothetical protein PsgB076_21372 [Pseudomonas syringae pv.
glycinea str. B076]
Length = 990
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 803 ELGSVSFAPGSSDLSAEAQSALDKLSVALKERPDLKLEIEG 843
>gi|299769827|ref|YP_003731853.1| hypothetical protein AOLE_07945 [Acinetobacter sp. DR1]
gi|298699915|gb|ADI90480.1| hypothetical protein AOLE_07945 [Acinetobacter sp. DR1]
Length = 218
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 3/108 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLAS-REKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L L + +SGC AS K+K ++ ++ +DK + Q
Sbjct: 1 MKKYLTLIIIGSALLSGCSNASDGTKQKEVKTETTAPKTLSAEDQKIIDKHNEYVQKYSL 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI--ATILNK 105
+ V + I + L+ +L A LN
Sbjct: 61 EDKEVFQKHMREILPEVDKITDKRKRELLQMNIYMILNDYDKAHALND 108
>gi|260654502|ref|ZP_05859992.1| phosphate ABC transporter, periplasmic phosphate-binding protein
PstS [Jonquetella anthropi E3_33 E1]
gi|260630779|gb|EEX48973.1| phosphate ABC transporter, periplasmic phosphate-binding protein
PstS [Jonquetella anthropi E3_33 E1]
Length = 276
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 13/160 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ LS+ ++ +GC A+ +K + I K ++ +D
Sbjct: 4 LKKVLLSLMCLSVFAGCSWAAEKKTVDMNGSTTVLPIAQKAAEKYMESHKDVTIT----- 58
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHTDSI 120
+ S G+ I I + K A ++P IA+ + +
Sbjct: 59 -VSGSGSGNGIKALIDGSTDIANSSRFIKDAEV---KAAIDAKRYPVPFEIALDALVPIV 114
Query: 121 GTLKNNLLISQERADVIKSYLIQRG---VSSNRFISVRGF 157
+S+++ I + I ++ I+V G
Sbjct: 115 NPANPVTDLSKDQLKRIYAGEITNWKEVGGEDKAIAVVGR 154
>gi|108799475|ref|YP_639672.1| hypothetical protein Mmcs_2508 [Mycobacterium sp. MCS]
gi|119868588|ref|YP_938540.1| hypothetical protein Mkms_2553 [Mycobacterium sp. KMS]
gi|126435129|ref|YP_001070820.1| hypothetical protein Mjls_2545 [Mycobacterium sp. JLS]
gi|108769894|gb|ABG08616.1| hypothetical protein Mmcs_2508 [Mycobacterium sp. MCS]
gi|119694677|gb|ABL91750.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126234929|gb|ABN98329.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length = 239
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 24/96 (25%), Gaps = 5/96 (5%)
Query: 8 SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSR 67
++F + T+S C + + + + E + + + R
Sbjct: 14 AIFALGTLSACSGGESSTETTTSAPAPTSAQAFPPSAKYIADMEKDGRPMTIGIAVDGDR 73
Query: 68 IGDMITCYIPVHVSFVSEV-----FLEKKFLPMLQL 98
+ F + L KF L
Sbjct: 74 VAAYACNGTDDEAWFFGDQTDGTIDLTSKFRDTLDA 109
>gi|254244363|ref|ZP_04937685.1| hypothetical protein PA2G_05217 [Pseudomonas aeruginosa 2192]
gi|126197741|gb|EAZ61804.1| hypothetical protein PA2G_05217 [Pseudomonas aeruginosa 2192]
Length = 1088
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 13/41 (31%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L +A L + P+ + ++
Sbjct: 901 DLGTVPFAAGSDELTPEAQANLDKLADALKERPALRLEVEG 941
>gi|116052882|ref|YP_793199.1| hypothetical protein PA14_62650 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115588103|gb|ABJ14118.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 1088
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 13/41 (31%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L +A L + P+ + ++
Sbjct: 901 DLGTVPFAAGSDELTPEAQANLDKLADALKERPALRLEVEG 941
>gi|255036260|ref|YP_003086881.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dyadobacter
fermentans DSM 18053]
gi|254949016|gb|ACT93716.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dyadobacter
fermentans DSM 18053]
Length = 774
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 13/143 (9%)
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
+ L ++ + + V+ V + + L L + I+ K
Sbjct: 544 VTAKDTQTLNSVRKSLATSPYKLERKSKELLFPVNSVEIGNEQLDALTDLYIIMQKNADY 603
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
V+ I + + S R + YL R + R I + + +
Sbjct: 604 VVEIAGYRS----ADEPEITSSTRVRNVVKYLNARNIPILRIIE-KDYGSFR-----QSA 653
Query: 170 VGRQNNQRIEIQIF--PRGNIKK 190
+ N+R+ Q F + +++K
Sbjct: 654 EP-ERNRRVAFQFFSQSKSDVEK 675
>gi|107103834|ref|ZP_01367752.1| hypothetical protein PaerPA_01004905 [Pseudomonas aeruginosa PACS2]
Length = 1088
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 13/41 (31%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L +A L + P+ + ++
Sbjct: 901 DLGTVPFAAGSDELTPEAQANLDKLADALKERPALRLEVEG 941
>gi|330895297|gb|EGH27635.1| hypothetical protein PSYJA_00785 [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 990
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 803 DLGSVSFVPGSSDLSAEAQKALDKLSVALKERPDLKLEIEG 843
>gi|218893830|ref|YP_002442699.1| hypothetical protein PLES_51201 [Pseudomonas aeruginosa LESB58]
gi|218774058|emb|CAW29874.1| hypothetical protein PLES_51201 [Pseudomonas aeruginosa LESB58]
Length = 1090
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 13/41 (31%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L +A L + P+ + ++
Sbjct: 903 DLGTVPFAAGSDELTPEAQANLDKLADALKERPALRLEVEG 943
>gi|154500066|ref|ZP_02038104.1| hypothetical protein BACCAP_03726 [Bacteroides capillosus ATCC
29799]
gi|150271156|gb|EDM98425.1| hypothetical protein BACCAP_03726 [Bacteroides capillosus ATCC
29799]
Length = 378
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 31/93 (33%), Gaps = 6/93 (6%)
Query: 1 MIKE-----LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE-F 54
M+K LGL++ + T++ CG + + + + + + K E++
Sbjct: 1 MMKRNKFLALGLALVMALTLAACGNDAADSTPSPSATAGEENNTESKTYQFTGKYEEDSA 60
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ + +++ D +
Sbjct: 61 NASMLNAAFLLNLNEDGTAVADRYMFDNYDDSD 93
>gi|57650441|ref|YP_186370.1| hypothetical protein SACOL1528 [Staphylococcus aureus subsp.
aureus COL]
gi|87162064|ref|YP_494073.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195223|ref|YP_500025.1| hypothetical protein SAOUHSC_01508 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221606|ref|YP_001332428.1| hypothetical protein NWMN_1394 [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161509655|ref|YP_001575314.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|221140948|ref|ZP_03565441.1| lipoprotein [Staphylococcus aureus subsp. aureus str. JKD6009]
gi|258451143|ref|ZP_05699178.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|284024483|ref|ZP_06378881.1| putative lipoprotein [Staphylococcus aureus subsp. aureus 132]
gi|294848450|ref|ZP_06789196.1| lipoprotein [Staphylococcus aureus A9754]
gi|304380930|ref|ZP_07363589.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|57284627|gb|AAW36721.1| lipoprotein, putative [Staphylococcus aureus subsp. aureus COL]
gi|87128038|gb|ABD22552.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202781|gb|ABD30591.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374406|dbj|BAF67666.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160368464|gb|ABX29435.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|257861198|gb|EEV84011.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|294824476|gb|EFG40899.1| lipoprotein [Staphylococcus aureus A9754]
gi|302751317|gb|ADL65494.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340516|gb|EFM06451.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|315197763|gb|EFU28097.1| lipoprotein [Staphylococcus aureus subsp. aureus CGS01]
gi|320140342|gb|EFW32198.1| hypothetical protein HMPREF9528_01323 [Staphylococcus aureus
subsp. aureus MRSA131]
gi|320142730|gb|EFW34533.1| hypothetical protein HMPREF9529_01830 [Staphylococcus aureus
subsp. aureus MRSA177]
gi|329723171|gb|EGG59702.1| putative lipoprotein [Staphylococcus aureus subsp. aureus 21189]
Length = 304
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 9/96 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ + +SGC + E K + D AE + +
Sbjct: 1 MLKKAKFILMATILLSGCSTTNNESNKETKSVPEEMDASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+++ G+ F+ L+ K ++
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKATNVI 87
>gi|127513222|ref|YP_001094419.1| hypothetical protein Shew_2294 [Shewanella loihica PV-4]
gi|126638517|gb|ABO24160.1| hypothetical protein Shew_2294 [Shewanella loihica PV-4]
Length = 735
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 36/117 (30%), Gaps = 12/117 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM--QL 58
M K + LS ++ +S C + + + + L+ + QL
Sbjct: 14 MKKSILLSACAISILSACSHQAPRSGEQQVAPEAPQAQMQLNDQVQLNDLANTLNDRWQL 73
Query: 59 QDTGIVVSRIG---DMITCYIP--VHVSFVSEVFLEKKFLPMLQL--IATILNKFPS 108
D GI D I + + +++ L+ + +L P+
Sbjct: 74 GDEGITWQVQDKHEDHIEMSGEQISAIIYYGS---DEQGQLTLKRKLVWPMLRTIPN 127
>gi|325285104|ref|YP_004260894.1| hypothetical protein Celly_0188 [Cellulophaga lytica DSM 7489]
gi|324320558|gb|ADY28023.1| hypothetical protein Celly_0188 [Cellulophaga lytica DSM 7489]
Length = 177
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 2 IKELGLSMFI--MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K++ L++ ++ C + L N T + + G+ D+ E +
Sbjct: 1 MKKITLAVAAIFAIILTACSGSDGIDGVDGLDGVNITGSIYEVSGTFSDENNYELTFEFP 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVS 84
+T + V ++ + V
Sbjct: 61 NT-VEVFESDVVLVYILWEQVDGTD 84
>gi|313109715|ref|ZP_07795655.1| hypothetical protein PA39016_002040012 [Pseudomonas aeruginosa
39016]
gi|310882157|gb|EFQ40751.1| hypothetical protein PA39016_002040012 [Pseudomonas aeruginosa
39016]
Length = 1089
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 13/41 (31%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L +A L + P+ + ++
Sbjct: 902 DLGTVPFAAGSDELTPEAQANLDKLADALKERPALRLEVEG 942
>gi|269940977|emb|CBI49361.1| putative lipoprotein [Staphylococcus aureus subsp. aureus TW20]
Length = 304
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 9/96 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ + +SGC + E K + D AE + +
Sbjct: 1 MLKKAKFILMATILLSGCSTTNNESNKETKSVPEEMDASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+++ G+ F+ L+ K ++
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKATNVI 87
>gi|329314163|gb|AEB88576.1| Lipoprotein [Staphylococcus aureus subsp. aureus T0131]
Length = 304
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 9/96 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ + +SGC + E K + + AE + +
Sbjct: 1 MLKKAKFILMATILLSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+++ G+ F+ L+ K ++
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKATNVI 87
>gi|298488463|ref|ZP_07006494.1| putative exported protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298157088|gb|EFH98177.1| putative exported protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 1005
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 818 DLGSVSFAPGSSDLSAEAQSALDKLSVALKERPDLKLEIEG 858
>gi|194295640|gb|ACF40847.1| outer membrane protein [Riemerella anatipestifer]
Length = 270
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 16/145 (11%), Positives = 40/145 (27%), Gaps = 15/145 (10%)
Query: 17 GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYI 76
GC + V ++ K ++ + ++ +
Sbjct: 140 GCPWPDTDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGA--------------L 185
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADV 136
++ + + L A ++ + H D G NL +S+ERA
Sbjct: 186 KGIFFNFNKASIRPESNTKLDQAAEVIKSSNGGTFLVVGHADVKGNANYNLKLSRERAAS 245
Query: 137 IKSYLIQRGVSSNRFISVRGFAYKY 161
+ ++ + + +G
Sbjct: 246 VV-VALEARGVNPSQLKSKGVGSAE 269
>gi|59711304|ref|YP_204080.1| putative lipoprotein [Vibrio fischeri ES114]
gi|197335523|ref|YP_002155460.1| lipoprotein, putative [Vibrio fischeri MJ11]
gi|59479405|gb|AAW85192.1| lipoprotein, putative [Vibrio fischeri ES114]
gi|197317013|gb|ACH66460.1| lipoprotein, putative [Vibrio fischeri MJ11]
Length = 108
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 5/26 (19%), Positives = 14/26 (53%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKK 27
+K++ L+ ++GC A +++
Sbjct: 1 MKKISLACLFTLVLAGCSSAPKQQDN 26
>gi|325001582|ref|ZP_08122694.1| putative substrate-binding transport protein [Pseudonocardia sp.
P1]
Length = 531
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 12/121 (9%), Positives = 28/121 (23%), Gaps = 26/121 (21%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR------------------- 42
++ + + + ++GC + + T +
Sbjct: 4 LRNIAVPLLAALVVAGCSAPTPAPGESAPTGDPTTMTLADGYEPDDLNPLLGYGAEGASK 63
Query: 43 --FGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK-----FLPM 95
G A+ Q L S T + V+F + + +
Sbjct: 64 FYDGLYAHDADRALQPALAAGEATPSPDRRSWTVPLRQGVTFHDGSTFGPEDVVATYRAI 123
Query: 96 L 96
L
Sbjct: 124 L 124
>gi|119945648|ref|YP_943328.1| hypothetical protein Ping_1960 [Psychromonas ingrahamii 37]
gi|119864252|gb|ABM03729.1| hypothetical protein Ping_1960 [Psychromonas ingrahamii 37]
Length = 435
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 3/80 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ L++ + + ++GCG +S + T V L AE
Sbjct: 1 MLKKSLLAVALASILTGCGGSSDGTDSGSTDTGSTTYTV---IDGYLSAAEVYVLSPDGG 57
Query: 61 TGIVVSRIGDMITCYIPVHV 80
T I++ I
Sbjct: 58 TEILIGETDANGKIQIEAKY 77
>gi|282855342|ref|ZP_06264668.1| putative liporotein [Pyramidobacter piscolens W5455]
gi|282586803|gb|EFB92045.1| putative liporotein [Pyramidobacter piscolens W5455]
Length = 447
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 47/166 (28%), Gaps = 19/166 (11%)
Query: 1 MIKELGLSMFIMTTIS--GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + L + + +S CG A K S I+ + G S+++ + +
Sbjct: 1 MKKSVCLVLSAVMMLSVTACGSA-----KTSGKSSAVQSIIKQAEGMSMEELAKKAIEES 55
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL-------PMLQLIATILNKFPSTVI 111
+P+ + ++ + ++ P I L +
Sbjct: 56 NGKMFYGVGNSSRGKSALPLFIKYLQS--INPEYKLDFEWQQPKNNKIFDQLTAD---SL 110
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
N + S+ I I + + ++ +
Sbjct: 111 KSSGTFAMTLIQDGNQIESKMVRTGILDTFIPKEWAEANGLAADAY 156
>gi|300871695|ref|YP_003786568.1| hypothetical protein BP951000_2090 [Brachyspira pilosicoli 95/1000]
gi|300689396|gb|ADK32067.1| hypothetical protein BP951000_2090 [Brachyspira pilosicoli 95/1000]
Length = 190
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 85 EVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL-LISQERADVIKSYLIQ 143
+ + + + ++ + + ++ + ++ ++ H D I K +L ++ + + +I
Sbjct: 68 KAYNIEDYTYVMNEMISFMSNNRNAILIVEGHADEISKEKLDLNMMLSLQRASVIRDVIV 127
Query: 144 RGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQ 181
S++ + + ++Y P T +T N+R++
Sbjct: 128 SFGISHQRVKIYPYSYFAPKYTTNT----FQNRRVDFV 161
>gi|15599929|ref|NP_253423.1| hypothetical protein PA4735 [Pseudomonas aeruginosa PAO1]
gi|9950996|gb|AAG08121.1|AE004887_5 hypothetical protein PA4735 [Pseudomonas aeruginosa PAO1]
Length = 1088
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 13/41 (31%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L +A L + P+ + ++
Sbjct: 901 DLGTVPFAAGSDELTPEAQANLDKLADALKERPALRLEVEG 941
>gi|207111044|ref|ZP_03245206.1| peptidoglycan associated lipoprotein precursor (omp18)
[Helicobacter pylori HPKX_438_CA4C1]
Length = 34
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 14/33 (42%)
Query: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
I F P T+ + N+R+++++
Sbjct: 1 MIKTISFGETKPKCAQKTRECYKENRRVDVKLV 33
>gi|330987062|gb|EGH85165.1| hypothetical protein PLA107_18689 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 990
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 803 DLGSVSFAPGSSDLSAEAQSALDKLSVALKERPDLKLEIEG 843
>gi|266620701|ref|ZP_06113636.1| peptidyl-prolyl cis-trans isomerase [Clostridium hathewayi DSM
13479]
gi|288867695|gb|EFC99993.1| peptidyl-prolyl cis-trans isomerase [Clostridium hathewayi DSM
13479]
Length = 219
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 29/96 (30%), Gaps = 16/96 (16%)
Query: 1 MIKELGLSMFI-MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + L M + ++GC + + + +T + +
Sbjct: 1 MKKRIMLLMVLTAAVLAGCSGKAGAADQTISSSAAETAAEETKTDAGT------------ 48
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
G V + + + + + V L + P+
Sbjct: 49 -AGETVEAVKHHVKINVKDYGTI--SVELNPTYAPI 81
>gi|257482254|ref|ZP_05636295.1| hypothetical protein PsyrptA_03232 [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|331011506|gb|EGH91562.1| hypothetical protein PSYTB_17880 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 990
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 803 DLGSVSFAPGSSDLSAEAQSALDKLSVALKERPDLKLEIEG 843
>gi|281411904|ref|YP_003345983.1| OmpA/MotB domain protein [Thermotoga naphthophila RKU-10]
gi|281373007|gb|ADA66569.1| OmpA/MotB domain protein [Thermotoga naphthophila RKU-10]
Length = 288
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 32/99 (32%), Gaps = 7/99 (7%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
I V + + V F L + +L + I+ + + V+ I + D
Sbjct: 94 GKITVEERDEGTLIVLKDMVFFETGSAKLTVEAKELLAKVGQIVIEHTTNVLEIYGYADD 153
Query: 120 -----IGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
+N +S RA + ++ + R I
Sbjct: 154 RLPLPNSIYVSNWHLSSARAASVVNFFLTELK-EKRMIE 191
>gi|160940482|ref|ZP_02087827.1| hypothetical protein CLOBOL_05372 [Clostridium bolteae ATCC
BAA-613]
gi|158437062|gb|EDP14829.1| hypothetical protein CLOBOL_05372 [Clostridium bolteae ATCC
BAA-613]
Length = 456
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 6/111 (5%)
Query: 1 MIKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K+L L+ ++T ++GCG +S + DT + + D A+ E + +
Sbjct: 20 MRKKLIGVMLAAAMVTGLAGCGSSSG---TGTSAAAADTQATEAQKEEAKDDAKKEDEKE 76
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ I + + F M L +P
Sbjct: 77 DSEASDTEGASDFHIGIVTGSVSQSEDDRRGAEAFQAMYGEDMVKLAIYPD 127
>gi|322374731|ref|ZP_08049245.1| putative lipoprotein [Streptococcus sp. C300]
gi|321280231|gb|EFX57270.1| putative lipoprotein [Streptococcus sp. C300]
Length = 238
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 10/107 (9%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + LS + T++ C + ++ + S ++ + ++ +
Sbjct: 1 MKKRYIVLSGLLAVTLAACSQEKPKNEENTQKTEQTSQPEGTVGSKSQASSQKKAEVVNK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
+ D I + L + +
Sbjct: 61 GDYYSIQGKYDEIVIANKHYPLSKDYNPGENPTAKAELVKLIAAMQA 107
>gi|322390012|ref|ZP_08063551.1| peptidyl-prolyl cis-trans isomerase [Streptococcus parasanguinis
ATCC 903]
gi|321143325|gb|EFX38764.1| peptidyl-prolyl cis-trans isomerase [Streptococcus parasanguinis
ATCC 903]
Length = 287
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 18/60 (30%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L +F ++ C + K K +E Q +L+
Sbjct: 7 MKKLIALLLFSGLALTACSSNKTDANSSSSSKEKTEQTATSSSSEKDQKKIEEEQKKLEQ 66
>gi|315612743|ref|ZP_07887654.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
ATCC 49296]
gi|315314853|gb|EFU62894.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
ATCC 49296]
Length = 238
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 10/107 (9%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + LS + T++ C + ++ + S ++ + ++ +
Sbjct: 1 MKKRYIVLSGLLAVTLAACSQEKPKNEENTQKTEQTSQPEGTVGSKSQASSQKKAEVVNK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
+ D I + L + +
Sbjct: 61 GDYYSIQGKYDEIVIANKHYPLSKDYNPGENPTAKAELVKLIAAMQA 107
>gi|295092613|emb|CBK78720.1| amino acid ABC transporter substrate-binding protein, PAAT family
(TC 3.A.1.3.-) [Clostridium cf. saccharolyticum K10]
Length = 302
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 27/89 (30%), Gaps = 7/89 (7%)
Query: 1 MIKELG---LSMFIMTTISGCGLASR--EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M K++ + ++ +++ C ++ E + ++ T+ S A E
Sbjct: 1 MKKKVFSVMTAAALVFSLTACSTNAKTEEPETAAQSSASQTEAAGAETAESSGGASAEAG 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
+ GD T +
Sbjct: 61 EKAASG--ETKAAGDTFTVGFDQDFPPMG 87
>gi|169833487|ref|YP_001694107.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
Hungary19A-6]
gi|168995989|gb|ACA36601.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
Hungary19A-6]
Length = 238
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 9/107 (8%), Positives = 27/107 (25%), Gaps = 2/107 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + LS + ++ C + ++ + S ++ + ++ +
Sbjct: 1 MKKRYIVLSGLLAVILAACSQEKPKNEENTQKTEQTSQPEGTVGSKSQASSQKKAEVVNK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
+ D I + L + +
Sbjct: 61 GDYYSIQGKYDEIVIANKHYPLSKDYNPGENPTAKAELVKLIAAMQA 107
>gi|330888651|gb|EGH21312.1| hypothetical protein PSYMO_07285 [Pseudomonas syringae pv. mori
str. 301020]
Length = 990
Score = 39.2 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 803 DLGSVSFAPGSSDLSAEAQSALDKLSVALKERPDLKLEIEG 843
>gi|289627540|ref|ZP_06460494.1| hypothetical protein PsyrpaN_20827 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289646968|ref|ZP_06478311.1| hypothetical protein Psyrpa2_04332 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330868253|gb|EGH02962.1| hypothetical protein PSYAE_13582 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 990
Score = 39.2 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 803 DLGSVSFAPGSSDLSAEAQSALDKLSVALKERPDLKLEIEG 843
>gi|229163027|ref|ZP_04290983.1| hypothetical protein bcere0009_37960 [Bacillus cereus R309803]
gi|228620433|gb|EEK77303.1| hypothetical protein bcere0009_37960 [Bacillus cereus R309803]
Length = 247
Score = 39.2 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 6 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 63
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 64 TQGKEKVTDADDVKFEI 80
>gi|225620052|ref|YP_002721309.1| ankyrin repeat-containing protein [Brachyspira hyodysenteriae
WA1]
gi|225214871|gb|ACN83605.1| ankyrin repeat-containing protein [Brachyspira hyodysenteriae
WA1]
Length = 364
Score = 39.2 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 9/89 (10%), Positives = 30/89 (33%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ ++ I+ +I C + +V + + ++ + ED ++
Sbjct: 1 MKKIIITALILISIISCNSKKADNTEVTTDTNAINTNNTEISNNNDEYVEDNNTEEINTD 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+S + + + L+
Sbjct: 61 TAEISEVPEWDLEAFNDLKNVNDAQSLKS 89
>gi|169829996|ref|YP_001700154.1| hypothetical protein Bsph_4580 [Lysinibacillus sphaericus C3-41]
gi|168994484|gb|ACA42024.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 326
Score = 39.2 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 29/89 (32%), Gaps = 1/89 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L +S+ M ++ C K + T+ V + E + Q
Sbjct: 1 MKKLLMVSVAAMALLAACQDKEPVKGNTTNSEGTKTESVATENTTKDQAQEQLTKGQAMA 60
Query: 61 TGIVVSR-IGDMITCYIPVHVSFVSEVFL 88
T + + G + ++ + F+
Sbjct: 61 TILSATNWQGTKVYDKDNNDLTAENSNFI 89
>gi|301055586|ref|YP_003793797.1| DHH subfamily 1 protein [Bacillus anthracis CI]
gi|300377755|gb|ADK06659.1| DHH subfamily 1 protein [Bacillus cereus biovar anthracis str.
CI]
Length = 247
Score = 39.2 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 1 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 58
Query: 60 DTGIVVSRIGDMITCYI 76
G D + +
Sbjct: 59 TQGKEKVTDADDVKFEV 75
>gi|225866074|ref|YP_002751452.1| putative lipoprotein [Bacillus cereus 03BB102]
gi|225785944|gb|ACO26161.1| putative lipoprotein [Bacillus cereus 03BB102]
Length = 247
Score = 39.2 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 1 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 58
Query: 60 DTGIVVSRIGDMITCYI 76
G D + +
Sbjct: 59 TQGKEKVTDADDVKFEV 75
>gi|165871130|ref|ZP_02215780.1| putative lipoprotein [Bacillus anthracis str. A0488]
gi|167633513|ref|ZP_02391837.1| putative lipoprotein [Bacillus anthracis str. A0442]
gi|167639413|ref|ZP_02397684.1| putative lipoprotein [Bacillus anthracis str. A0193]
gi|170687225|ref|ZP_02878443.1| putative lipoprotein [Bacillus anthracis str. A0465]
gi|170705881|ref|ZP_02896344.1| putative lipoprotein [Bacillus anthracis str. A0389]
gi|177652719|ref|ZP_02935135.1| putative lipoprotein [Bacillus anthracis str. A0174]
gi|190565999|ref|ZP_03018918.1| putative lipoprotein [Bacillus anthracis Tsiankovskii-I]
gi|196034984|ref|ZP_03102391.1| putative lipoprotein [Bacillus cereus W]
gi|196038773|ref|ZP_03106081.1| putative lipoprotein [Bacillus cereus NVH0597-99]
gi|218905228|ref|YP_002453062.1| putative lipoprotein [Bacillus cereus AH820]
gi|227816867|ref|YP_002816876.1| putative lipoprotein [Bacillus anthracis str. CDC 684]
gi|229599951|ref|YP_002868389.1| putative lipoprotein [Bacillus anthracis str. A0248]
gi|164713049|gb|EDR18576.1| putative lipoprotein [Bacillus anthracis str. A0488]
gi|167512472|gb|EDR87847.1| putative lipoprotein [Bacillus anthracis str. A0193]
gi|167530919|gb|EDR93606.1| putative lipoprotein [Bacillus anthracis str. A0442]
gi|170129421|gb|EDS98285.1| putative lipoprotein [Bacillus anthracis str. A0389]
gi|170668842|gb|EDT19587.1| putative lipoprotein [Bacillus anthracis str. A0465]
gi|172082054|gb|EDT67122.1| putative lipoprotein [Bacillus anthracis str. A0174]
gi|190562918|gb|EDV16884.1| putative lipoprotein [Bacillus anthracis Tsiankovskii-I]
gi|195992523|gb|EDX56484.1| putative lipoprotein [Bacillus cereus W]
gi|196030496|gb|EDX69095.1| putative lipoprotein [Bacillus cereus NVH0597-99]
gi|218539216|gb|ACK91614.1| putative lipoprotein [Bacillus cereus AH820]
gi|227002856|gb|ACP12599.1| putative lipoprotein [Bacillus anthracis str. CDC 684]
gi|229264359|gb|ACQ45996.1| putative lipoprotein [Bacillus anthracis str. A0248]
Length = 247
Score = 39.2 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 1 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 58
Query: 60 DTGIVVSRIGDMITCYI 76
G D + +
Sbjct: 59 TQGKEKVTDADDVKFEV 75
>gi|160936778|ref|ZP_02084144.1| hypothetical protein CLOBOL_01668 [Clostridium bolteae ATCC
BAA-613]
gi|158440270|gb|EDP18016.1| hypothetical protein CLOBOL_01668 [Clostridium bolteae ATCC
BAA-613]
Length = 324
Score = 39.2 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 29/111 (26%), Gaps = 8/111 (7%)
Query: 1 MIKELG---LSMFIMTTISGCGLASREKKKV-FLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K L L+ + +++GCG + + ++ T E+
Sbjct: 22 MKKRLFSLALASVMALSLAGCGGSKEAATEAETKAETEQTAADTSAKAEDTTAQEETKAE 81
Query: 57 QLQDTGIVVSRIGDMITCYIPVHV----SFVSEVFLEKKFLPMLQLIATIL 103
+ V G + L + + +A L
Sbjct: 82 SEAASEAVSESAGGTLIVGFDQDFPPMGFMGDNGEYTGFDLELAKEVAERL 132
>gi|119945649|ref|YP_943329.1| hypothetical protein Ping_1961 [Psychromonas ingrahamii 37]
gi|119864253|gb|ABM03730.1| hypothetical protein Ping_1961 [Psychromonas ingrahamii 37]
Length = 269
Score = 39.2 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 5/91 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD--IVNKRFGSSLDKAEDEFQMQL 58
MIK+ L++ + T ++GCG +S + + + SLD + +
Sbjct: 1 MIKKSLLAVALATILTGCGGSSDSTDPGSTIYTVIDGYLSAAEVYVLSLDGSTKTLIGET 60
Query: 59 QDTG---IVVSRIGDMITCYIPVHVSFVSEV 86
G I G + I + S+
Sbjct: 61 NTNGQIQIPTEYEGYTVIAKIIAGKTIDSDS 91
>gi|308814883|emb|CBM95495.1| neisserial heparin binding antigen [Neisseria meningitidis]
Length = 431
Score = 39.2 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 21/87 (24%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPAAPVVAEKETEVKEDAPQAGSQG 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ + + +
Sbjct: 61 QDVPSKQGSQDMAAVSAENTGNGGSAT 87
>gi|304317463|ref|YP_003852608.1| hypothetical protein Tthe_2042 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778965|gb|ADL69524.1| conserved hypothetical protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 246
Score = 39.2 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Query: 2 IKELGLSMFIM-TTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-SLDKAEDEFQMQLQ 59
+K+L +++ I+ +SGCG + E + + + +D + +
Sbjct: 1 MKKLFIALLILTLFLSGCGSETSEDSRSKIQTTQISDTAKNNSENIDAPHINQHIPQLIT 60
Query: 60 DTGIVVSRIGDMITCYIPVHV---SFVSEVFLE 89
G VS + + + +++
Sbjct: 61 YNGNHVSAWVNQFLFVENGDLKESYDGDKSYIK 93
>gi|261822510|ref|YP_003260616.1| hypothetical protein Pecwa_3267 [Pectobacterium wasabiae WPP163]
gi|261606523|gb|ACX89009.1| Uncharacterized lipoprotein [Pectobacterium wasabiae WPP163]
Length = 192
Score = 39.2 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC S D S++ A+ L
Sbjct: 1 MLKKLFFPLLAVILLAGCAAKSNTLNITPKISLPSQDPTLMGVTISINGADQRADQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G ++T + F
Sbjct: 60 ---KVNRDGQLLTLTPSRDLRF 78
>gi|86141022|ref|ZP_01059581.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
MED217]
gi|85832964|gb|EAQ51413.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
MED217]
Length = 268
Score = 39.2 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 33/99 (33%), Gaps = 4/99 (4%)
Query: 41 KRFGSSLDKAEDEFQMQL---QDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPML 96
+ + +D L + G+ V + + + + F S + K +
Sbjct: 155 AAKDAKMRALKDAISKALVDFEGNGLTVEQRDGKVYVSLENKLLFESGSWNVGAKGRQAV 214
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ ++L + P + I+ HTD + N L
Sbjct: 215 NQLGSVLAQNPEIAVLIEGHTDDVPYGGNGPLKDNWDLS 253
>gi|299537010|ref|ZP_07050315.1| hypothetical protein BFZC1_13358 [Lysinibacillus fusiformis ZC1]
gi|298727590|gb|EFI68160.1| hypothetical protein BFZC1_13358 [Lysinibacillus fusiformis ZC1]
Length = 152
Score = 39.2 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 26/90 (28%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L +F + CG ++ K+ +N DIV + E + +
Sbjct: 1 MKKIIYLLVFTSLLLVACGKSAEPKEVAVDQNTNVEDIVGAIVKNEFSVDESKDGIVTIS 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
G F L+
Sbjct: 61 IQDTDVTEGSKSQMLKDSTKIFADLSKLKN 90
>gi|254441967|ref|ZP_05055453.1| hypothetical protein OA307_12 [Octadecabacter antarcticus 307]
gi|198250589|gb|EDY74911.1| hypothetical protein OA307_12 [Octadecabacter antarcticus 307]
Length = 50
Score = 39.2 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 152 ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
I F P+ +DT G+Q N+R+E+ +
Sbjct: 16 IDTAAFGEALPMACDDTIWGQQTNRRVELWV 46
>gi|325478483|gb|EGC81596.1| putative lipoprotein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 356
Score = 39.2 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 7/46 (15%), Positives = 16/46 (34%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS 46
M+K+L + + ++ CG +E K + +
Sbjct: 4 MLKKLSMGLLAAMLLTACGGNDKEAKNEADTSNKEVAQETSTEDGE 49
>gi|228935410|ref|ZP_04098228.1| hypothetical protein bthur0009_38570 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228824162|gb|EEM69976.1| hypothetical protein bthur0009_38570 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 247
Score = 39.2 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 6 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 63
Query: 60 DTGIVVSRIGDMITCYI 76
G D + +
Sbjct: 64 TQGKEKVTDADDVKFEV 80
>gi|295401348|ref|ZP_06811319.1| extracellular solute-binding protein family 1 [Geobacillus
thermoglucosidasius C56-YS93]
gi|294976563|gb|EFG52170.1| extracellular solute-binding protein family 1 [Geobacillus
thermoglucosidasius C56-YS93]
Length = 463
Score = 39.2 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 14/78 (17%)
Query: 2 IKELGLS-----MFIMTTISGCGLASR--------EKKKVFLHKSNDTDIVNKRFGSSLD 48
+K++ S + M +SGCG + +K KV ++ R + L+
Sbjct: 1 MKKITASVLSTFILAMGILSGCGKTDQSVGSESNEDKSKVVTIEAQTAAPEITRVEN-LE 59
Query: 49 KAEDEFQMQLQDTGIVVS 66
KA ++ +L+ G +
Sbjct: 60 KAAEKLNEELKQQGKDIR 77
>gi|293364978|ref|ZP_06611695.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus oralis ATCC
35037]
gi|307703227|ref|ZP_07640173.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus oralis ATCC
35037]
gi|291316428|gb|EFE56864.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus oralis ATCC
35037]
gi|307623302|gb|EFO02293.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus oralis ATCC
35037]
Length = 238
Score = 39.2 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 10/107 (9%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + LS + T++ C + ++ + S ++ + ++ +
Sbjct: 1 MKKRYIVLSGLLAVTLAACSQEKPKNEENTQKTEQTSQPEGTVGSKSQASSQKKAEVVNK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
+ D I + L + +
Sbjct: 61 GDYYSIQGKYDEIVIANKHYPLSKDYNPGENPTAKAELLKLIAAMQA 107
>gi|229174765|ref|ZP_04302289.1| hypothetical protein bcere0006_38520 [Bacillus cereus MM3]
gi|228608755|gb|EEK66053.1| hypothetical protein bcere0006_38520 [Bacillus cereus MM3]
Length = 252
Score = 39.2 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 6 MMKKLIMTVFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 63
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 64 TQGKEKVTDADDVKFEI 80
>gi|196047188|ref|ZP_03114404.1| putative lipoprotein [Bacillus cereus 03BB108]
gi|196021937|gb|EDX60628.1| putative lipoprotein [Bacillus cereus 03BB108]
Length = 247
Score = 39.2 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 1 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 58
Query: 60 DTGIVVSRIGDMITCYI 76
G D + +
Sbjct: 59 TQGKEKVTDADDVKFEV 75
>gi|145306771|ref|YP_001144435.1| hypothetical protein MGR_P0030 [Magnetospirillum gryphiswaldense
MSR-1]
gi|144901537|emb|CAM78259.1| hypothetical protein MGR_P0030 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 55
Score = 39.2 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSN 34
M+K L LS+F+ T++ C + +K
Sbjct: 1 MMKALYLSLFLAVTLAACSSSREIQKDGSGTDEM 34
>gi|313124071|ref|YP_004034330.1| ABC oligopeptide transporter periplasmic component [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312280634|gb|ADQ61353.1| ABC-type oligopeptide transport system, periplasmic component
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 593
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 15/179 (8%), Positives = 51/179 (28%), Gaps = 23/179 (12%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K ++ L + + +++ CG + + K+ + D + K ++
Sbjct: 1 MMKRLTKITLCLLVALSLAACGQKTEKSKQNGNSGAEDAMQFPVATSFAKTKKGGSIKVA 60
Query: 58 LQ---------DTGIVVSRIGDMITCYIPVHVSFVSEVF-----------LEKKFLPMLQ 97
L+ + S + + + + L+++ +
Sbjct: 61 LETDTPFTGIFSDELADSTTDATLAQFGSESLFDTDNSYNITDSGAASFSLDRQAKQITI 120
Query: 98 LIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRG 156
I + + + + + N S ++ + + ++ G
Sbjct: 121 NIKKGVKWSDGKQVVAKDVEYAYEVIANKATKSSHYTSSLQDVAGLKEYHDGKDKTISG 179
>gi|269123022|ref|YP_003305599.1| OmpA/MotB domain-containing protein [Streptobacillus moniliformis
DSM 12112]
gi|268314348|gb|ACZ00722.1| OmpA/MotB domain protein [Streptobacillus moniliformis DSM 12112]
Length = 491
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 14/118 (11%)
Query: 78 VHVSFVSEVFLE---KKFLPMLQLIATILNKFPST--VIAIQSHTDSIGTLKNNLLISQE 132
+ + LE +K +Q + L+ I I HTD +G+ NL +
Sbjct: 365 DALFKFDKYKLEDMLEKGKMEIQELVKKLSTDYVRLDRIDIIGHTDRLGSDSYNLALGLR 424
Query: 133 RADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN-------NQRIEIQIF 183
RA ++SYL + GV++ I+V + P N+R+EI +
Sbjct: 425 RAQTVRSYLQELGVTTP--ITVASKGKRDPKVKCPGTKATAKLKQCLLPNRRVEINLT 480
>gi|253577312|ref|ZP_04854630.1| phosphate binding protein [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251843316|gb|EES71346.1| phosphate binding protein [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 318
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 37/124 (29%), Gaps = 31/124 (25%)
Query: 1 MIKE--LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K L L++ + ++ CG + + D + G
Sbjct: 1 MKKSMLLILTLVLSFALAACGQNNAAPNNTAGTNGSTADDASASNG-------------- 46
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA-TILNKFPSTVIAIQSHT 117
G+ T + + V L P++ ++ +++ P+ I +Q
Sbjct: 47 ----------GNAATSELSGSILAVGSSAL----QPLVDQVSKKFMDQNPNVSIQVQGGG 92
Query: 118 DSIG 121
G
Sbjct: 93 SGTG 96
>gi|218233855|ref|YP_002368893.1| putative lipoprotein [Bacillus cereus B4264]
gi|218161812|gb|ACK61804.1| putative lipoprotein [Bacillus cereus B4264]
Length = 247
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 1 MMKKLIITLFIAMLALTGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 58
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 59 TQGKEKVTDADDVKFEI 75
>gi|167034393|ref|YP_001669624.1| hypothetical protein PputGB1_3397 [Pseudomonas putida GB-1]
gi|166860881|gb|ABY99288.1| hypothetical protein PputGB1_3397 [Pseudomonas putida GB-1]
Length = 104
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 17/48 (35%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK 49
+K L L ++GCG + ++ + + + + K
Sbjct: 1 MKRLALVALAGFVLAGCGKSDIDRAREAVAEQLTDPSSAQFRNERSKK 48
>gi|323142869|ref|ZP_08077581.1| hypothetical protein HMPREF9444_00187 [Succinatimonas hippei YIT
12066]
gi|322417411|gb|EFY08033.1| hypothetical protein HMPREF9444_00187 [Succinatimonas hippei YIT
12066]
Length = 165
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Query: 2 IKELGLSMFIMTT-ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K+L +++F +T ++GC E K+ + G + + +
Sbjct: 1 MKKLFIAIFALTFILAGCASVDLENKEQSEAAKIFKQPDPDKAGIYVYR---PSTIAGDG 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFV 83
+ V GD + P +
Sbjct: 58 MRLDVYLDGDCLGATGPNVFLYK 80
>gi|283796770|ref|ZP_06345923.1| extracellular solute-binding protein, family 3 [Clostridium sp.
M62/1]
gi|291075658|gb|EFE13022.1| extracellular solute-binding protein, family 3 [Clostridium sp.
M62/1]
Length = 302
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 27/89 (30%), Gaps = 7/89 (7%)
Query: 1 MIKELG---LSMFIMTTISGCGLASR--EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M K++ + ++ +++ C ++ E + ++ T+ S A E
Sbjct: 1 MKKKVFSVMTAAALVFSLTACSTNAKTEEPETAAQSSASQTEAAGAETAESSGGASAEAG 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
+ GD T +
Sbjct: 61 EKAASG--ETKAAGDTFTVGFDQDFPPMG 87
>gi|310766839|gb|ADP11789.1| hypothetical protein EJP617_21080 [Erwinia sp. Ejp617]
Length = 192
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ ++ + ++GC S + D S++ A+ L
Sbjct: 1 MLKKIIFTLLAVFVLAGCASNSNTLDVSPKIQLPQRDPGLMATTVSINGADRRSDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
V+R G ++T + F+ + LEK+
Sbjct: 60 ---KVNRDGRLVTLTPSRDLRFLLQETLEKQM 88
>gi|256831616|ref|YP_003160343.1| hypothetical protein Jden_0371 [Jonesia denitrificans DSM 20603]
gi|256685147|gb|ACV08040.1| hypothetical protein Jden_0371 [Jonesia denitrificans DSM 20603]
Length = 303
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 6/50 (12%), Positives = 21/50 (42%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
+K++ +++ ++ ++ CG +S ++ + D D+
Sbjct: 1 MKKVLIALSVVFCVTACGQSSNASTSDAPVEAAELDATVGEVVLPFDRFA 50
>gi|148269399|ref|YP_001243859.1| OmpA/MotB domain-containing protein [Thermotoga petrophila RKU-1]
gi|147734943|gb|ABQ46283.1| OmpA/MotB domain protein [Thermotoga petrophila RKU-1]
Length = 288
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 6/88 (6%)
Query: 61 TGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
I V + + V F L + +L + I+ + + V+ I + D
Sbjct: 94 GKITVEERDEGTLIVLKDMVFFETGSAKLTVEAKELLAKVGQIVIEHTTNVLEIYGYADD 153
Query: 120 -----IGTLKNNLLISQERADVIKSYLI 142
+N +S RA + ++ +
Sbjct: 154 RLPLPNSIYVSNWHLSSARAASVVNFFL 181
>gi|313609927|gb|EFR85324.1| secreted protein with hydrophobic anchor, putative [Listeria
monocytogenes FSL F2-208]
Length = 220
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 1 MIKELG-LSMFIMTTISGCGLASREKKKVFLHKSNDTD--IVNKRFGSSLDKAEDEFQMQ 57
M K + L M + ++GC + K ++ + ++ G DE + +
Sbjct: 1 MKKIIFTLVMSLALVLAGCADVTNTVKVDKKGEATISFDIAISSVAGIFASSYSDEVESK 60
Query: 58 LQDTGIVVSRIGDMI-TCYIPVHVSFVSEVFLEKK 91
L++ G V + + + + ++ ++ +
Sbjct: 61 LKEAGFTVDKKSNTSYYIEKKLDKNETTKSDMKPE 95
>gi|326792472|ref|YP_004310293.1| extracellular solute-binding protein family 1 [Clostridium
lentocellum DSM 5427]
gi|326543236|gb|ADZ85095.1| extracellular solute-binding protein family 1 [Clostridium
lentocellum DSM 5427]
Length = 478
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 32/117 (27%), Gaps = 15/117 (12%)
Query: 1 MIKELGLSMF----IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K+L + + ++GCG + + S + ++
Sbjct: 1 MKKKLFTLLLTTAMASSLLAGCGGNQTKTDEPAASPSTAPSASAEA---------EKDTS 51
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAI 113
L T I V G + + +L+ +A + + +
Sbjct: 52 SLAGTTISVYTHGGNRVLGEEKKDDAGNTY--RDESTAILKHLAEKFTQETGINVEL 106
>gi|291519644|emb|CBK74865.1| competence protein ComEA helix-hairpin-helix repeat region
[Butyrivibrio fibrisolvens 16/4]
Length = 191
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 30/92 (32%), Gaps = 5/92 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED-----EFQ 55
M K L L + + +GCG S + + +S ++ ++ S + + +
Sbjct: 1 MKKVLFLVLCSLFLFTGCGHTSYFQSTQLVEESAESGEASEDATSDISEVVPQVICIQVA 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ G+ G + I +
Sbjct: 61 GAVSKPGVYNLPTGSRVYAAIEAAGGLLDSAD 92
>gi|323455133|gb|EGB11002.1| hypothetical protein AURANDRAFT_71054 [Aureococcus anophagefferens]
Length = 1595
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 41/145 (28%), Gaps = 24/145 (16%)
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE-KKFLPMLQLIATILNKFPSTVIAIQS 115
L+ G++V + + FV + K P+L I +L P + +
Sbjct: 563 ALEGAGVMVDAGARRMWFS--QMIQFVGSRAIPLPKSQPLLAQILKVLQAHPGIAVRFEG 620
Query: 116 HTDSIGTLK-----NNLLISQERADV-------------IKSYLIQRGVSSNRFISVRGF 157
H +S L S I + +GF
Sbjct: 621 HVNSKCGLDCDGSGGCPNGSSMCVKCPGGAMGLSTARADAVKQFILACGIEPDRVYAQGF 680
Query: 158 AYKYPIDTNDTKV--GRQNNQRIEI 180
A + + G N+R+E+
Sbjct: 681 AGTRRLTGDVIDETVGH-VNRRVEV 704
>gi|296840885|ref|ZP_06899414.1| iron transporter, outer membrane receptor family [Neisseria
polysaccharea ATCC 43768]
gi|296839680|gb|EFH23618.1| iron transporter, outer membrane receptor family [Neisseria
polysaccharea ATCC 43768]
Length = 439
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 23/87 (26%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 16 MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPAAPVVAEKETEAKEDAPQAGSQG 75
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF 87
G ++ G + +
Sbjct: 76 QGAPSTQGGQDMAAVSAENTGNGGAAT 102
>gi|225375875|ref|ZP_03753096.1| hypothetical protein ROSEINA2194_01509 [Roseburia inulinivorans DSM
16841]
gi|225212310|gb|EEG94664.1| hypothetical protein ROSEINA2194_01509 [Roseburia inulinivorans DSM
16841]
Length = 582
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 36/137 (26%), Gaps = 7/137 (5%)
Query: 1 MIKELGLSMFIMTTI---SGCG-LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K L ++ + + CG S V ++ D+ M
Sbjct: 5 MKKRLIAALLAGMMLVQTTACGNSTSGTVGTVDNTETMSESGTEADTEKEGDEVTALSLM 64
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
Q +T + T Y SF + + L+ + L+ +
Sbjct: 65 QQVNTAEENVIDDNYRTYYEVFVYSFYDS---DGDGIGDLKGLTENLDYINDGDPETDTD 121
Query: 117 TDSIGTLKNNLLISQER 133
G ++ S
Sbjct: 122 LGCNGIWLMPIMPSTTY 138
>gi|222094616|ref|YP_002528676.1| hypothetical protein BCQ_0954 [Bacillus cereus Q1]
gi|221238674|gb|ACM11384.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 198
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 45/129 (34%), Gaps = 3/129 (2%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSND-TDIVNKRFGSSLDKAEDEFQMQ 57
M K L + + +S C +++ K++ + D T + + +S K E + +
Sbjct: 1 MKKYTLYSLMLLTVLFLSACSNSAQPKEENDVQSIKDVTVKIPETIFTSSKKNETINEDE 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
++ + I S +S+ + + LQ + + + + + ++
Sbjct: 61 MKQNIKTYLDYSGELYENIVPLSSAMSDEKVTESDREKLQKLIDLAQQNDANFLNFINNN 120
Query: 118 DSIGTLKNN 126
K
Sbjct: 121 TIPHDYKQP 129
>gi|169834024|ref|YP_001694231.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pneumoniae
Hungary19A-6]
gi|168996526|gb|ACA37138.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pneumoniae
Hungary19A-6]
Length = 267
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + ++GC R + S+ + + + ++ E L +
Sbjct: 1 MKKLATLLLLSTVALAGCSNVQRSLRGDDYVDSSLAAEESSKVAA---QSAKELNDALTN 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ + + S+ + K P L +A
Sbjct: 58 ENANFPQLSKEVAEDEAEVILHTSQGDIRIKLFPKLAPLA 97
>gi|322411276|gb|EFY02184.1| Manganese-binding protein [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 310
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 32/113 (28%), Gaps = 5/113 (4%)
Query: 1 MIKELGL---SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL--DKAEDEFQ 55
M K++ L + + C + K K T+ + + DK +
Sbjct: 1 MKKKISLILSAFLAAFLLVACSSTGSQADKSDKLKVVVTNSILADMTKMIAGDKIDLHSI 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ + + + + V F + + LE + K +
Sbjct: 61 VPIGQDPHEYEPLPEDVEKTNNADVIFYNGINLEDGGQAWFTKLVKNAQKKKN 113
>gi|290954017|ref|ZP_06558638.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
holarctica URFT1]
gi|295312606|ref|ZP_06803359.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
holarctica URFT1]
Length = 98
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 11/103 (10%), Positives = 24/103 (23%), Gaps = 7/103 (6%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + + M ++ C + + K D SS + +L
Sbjct: 1 MKKRIMNLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSS----QIYGSDKL 56
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+ +++ + L A
Sbjct: 57 SSDQVE-QMKKELMNINCRSVYFGFDSYNIIDDAKECLDKTAD 98
>gi|163854528|ref|YP_001628826.1| hypothetical protein Bpet0224 [Bordetella petrii DSM 12804]
gi|163258256|emb|CAP40555.1| conserved hypothetical protein [Bordetella petrii]
Length = 237
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 66/199 (33%), Gaps = 28/199 (14%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
+S ++ + G+A + D +I + + LD+ E GI +
Sbjct: 27 LMSALVVLFLVVMGVALLSVTQTVTDIQTDEEIHSNNIQAILDRFESAASSY---EGITI 83
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA--------TILNKFPSTVIAIQSHT 117
R I +F + L + +L+ L K + I+ +T
Sbjct: 84 HRDRHAIDFGQRAQFAFGT-WRLNAQQESVLRQFVPEILTIANDELGKNILKRVVIEGYT 142
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSS----------NRFISVRGFAYKYPIDTND 167
D G+ NL +S +R+ + + + V G+ N
Sbjct: 143 DKTGSYLTNLNLSLQRSQKVLCSMFATSGPNLLDDSQKADVRNLFFVGGY------SFNA 196
Query: 168 TKVGRQNNQRIEIQIFPRG 186
K ++R+E+++ RG
Sbjct: 197 AKESDDESRRVEMRLEFRG 215
>gi|326424402|ref|NP_763392.2| membrane protein [Vibrio vulnificus CMCP6]
gi|319999792|gb|AAO08382.2| membrane protein [Vibrio vulnificus CMCP6]
Length = 204
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 45/151 (29%), Gaps = 2/151 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M L + ++ C + A+ ++
Sbjct: 1 MRLNLLACAVLPMLLTACAQMPDTTMTRHQIDDLRDSDKDGVINQRDICADTPLGTEVDS 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G I + I + + + +LN+ + + T
Sbjct: 61 KGCTRWTIYQKV--DIKTVYFNFDDAHIRLDQSSEFDELLALLNQGTEAKVILVGDTSPE 118
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
G+ + N +++++R V+K LI+ G++ R
Sbjct: 119 GSDEYNQVLAKKRTSVLKEALIENGIAPERI 149
>gi|296391562|ref|ZP_06881037.1| hypothetical protein PaerPAb_25568 [Pseudomonas aeruginosa PAb1]
Length = 638
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 13/41 (31%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L +A L + P+ + ++
Sbjct: 451 DLGTVPFAAGSDELTPEAQANLDKLADALKERPALRLEVEG 491
>gi|157373849|ref|YP_001472449.1| hypothetical protein Ssed_0710 [Shewanella sediminis HAW-EB3]
gi|157316223|gb|ABV35321.1| hypothetical protein Ssed_0710 [Shewanella sediminis HAW-EB3]
Length = 271
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 7/51 (13%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Query: 2 IKELGLSMFIMTTISGCGLAS------REKKKVFLHKSNDTDIVNKRFGSS 46
+++ L+ ++ +SGC S +++ + + I+ G++
Sbjct: 4 MRKTLLAALCVSLLSGCASTSDGENTEQDRNRGLRTGAAGGAILGLALGAA 54
>gi|148652856|ref|YP_001279949.1| outer membrane protein [Psychrobacter sp. PRwf-1]
gi|148571940|gb|ABQ93999.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein-like protein [Psychrobacter sp. PRwf-1]
Length = 285
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D + + + + + ++ K+ +Q +A + P
Sbjct: 203 DNCRQPPTQTITTHPVTTPVMETQKPINL-DVLFDFDSAQIKGKYQQKIQPLAEYMQANP 261
Query: 108 STVIAIQSHTDSIGTLKNNLLISQ 131
+ ++SHTDS G NL S
Sbjct: 262 EATVHLESHTDSKGAAGYNLKSSS 285
>gi|15614653|ref|NP_242956.1| glucose dehydrogenase-B [Bacillus halodurans C-125]
gi|4514324|dbj|BAA75369.1| unknown [Bacillus halodurans]
gi|10174709|dbj|BAB05809.1| glucose dehydrogenase-B [Bacillus halodurans C-125]
Length = 371
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 21/46 (45%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS 46
M K LG++MF++ I+GC ++ + ++ + +
Sbjct: 1 MKKYLGITMFLILLIAGCSTNEQQPPEKEEQQNVSNEQEIGEQEAP 46
>gi|330875195|gb|EGH09344.1| hypothetical protein Pgy4_07944 [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 573
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 438 ELGSVSFAPGSSDLSAEAQSALDKLSVALKERPDLKLEIEG 478
>gi|317496363|ref|ZP_07954717.1| extracellular solute-binding protein [Gemella moribillum M424]
gi|316913499|gb|EFV34991.1| extracellular solute-binding protein [Gemella moribillum M424]
Length = 599
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 46/169 (27%), Gaps = 10/169 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKK--KVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M+K + +M + ++GC S ++K K + D + K L
Sbjct: 6 MLKVVSSAMALTMVLAGCSSTSNKQKGTKAAVEFKTSVDNGGTAVANQQLKVGILSADPL 65
Query: 59 QDTGIVV----SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL-NKFPSTVIAI 113
V + D++ + + L++ + L + I
Sbjct: 66 TGMFNPVFYLQATDWDVMNGTMTGAFTTDDSARLKQDDKDA--PVMFHLDRDKKEVTLTI 123
Query: 114 Q-SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
S G + I + ++ F + G +
Sbjct: 124 NKDLKWSNGEDVKSDDIIATYELMGNPKYTDNVRYTDEFEVIEGMKEYH 172
>gi|317047172|ref|YP_004114820.1| hypothetical protein Pat9b_0940 [Pantoea sp. At-9b]
gi|316948789|gb|ADU68264.1| Uncharacterized lipoprotein [Pantoea sp. At-9b]
Length = 192
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + ++GC + + D S++ A+ L
Sbjct: 1 MLKKLLFPLLAAFILAGCASNTTTLNIQPKIQLPQQDPSLMGVTVSINGADQRSDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G ++T + F
Sbjct: 60 ---KVNRDGQLVTLTPSRDLRF 78
>gi|213646008|ref|ZP_03376061.1| hypothetical protein SentesTy_00834 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
Length = 122
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC D S+ A+ L
Sbjct: 19 MLKKLLFPLVALFMLAGCATPPTTIDVAPKITLPQQDPSLMGVTVSITGADQRQDQALA- 77
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 78 ---KVTRNNQLVTLTASRDLRF 96
>gi|37675995|ref|NP_936391.1| outer membrane protein [Vibrio vulnificus YJ016]
gi|37200535|dbj|BAC96361.1| outer membrane protein [Vibrio vulnificus YJ016]
Length = 204
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 45/151 (29%), Gaps = 2/151 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M L + ++ C + A+ ++
Sbjct: 1 MRLNLLACAVLPMLLTACAQMPDTTMTRHQIDDLRDSDKDGVINQRDICADTPLGTEVDS 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G I + I + + + +LN+ + + T
Sbjct: 61 KGCTRWTIYQKV--DIKTVYFNFDDAHIRLDQSSEFDELLALLNQGTEAKVILVGDTSPE 118
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
G+ + N +++++R V+K LI+ G++ R
Sbjct: 119 GSDEYNQVLAKKRTSVLKEALIENGIAPERI 149
>gi|288870387|ref|ZP_06113880.2| basic membrane lipoprotein [Clostridium hathewayi DSM 13479]
gi|288867405|gb|EFC99703.1| basic membrane lipoprotein [Clostridium hathewayi DSM 13479]
Length = 370
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 24/91 (26%), Gaps = 5/91 (5%)
Query: 1 MIKELGLSMFIMTTISGCG--LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
++K L M T++ CG S E K ++ + + K + ++
Sbjct: 10 LMKVTALLMAAAMTLTACGGKTTSTETGKDTTPAKTESQAEGQTEAA---KETKKMRVAY 66
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
G + +
Sbjct: 67 VTAGAQGDNGFTDSVVRGMNRIKDDFGAEIT 97
>gi|258424643|ref|ZP_05687520.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|257845238|gb|EEV69275.1| conserved hypothetical protein [Staphylococcus aureus A9635]
Length = 125
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 36/115 (31%), Gaps = 8/115 (6%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K + + + ++GC + +K + + +NK + + + + +
Sbjct: 1 MMKRILVVFLMLAIVLAGCSNKGEKYQKDIDKVYKEQNQMNKIASKVQNTIKTDIKQEDS 60
Query: 60 DTGIVVSRIGDMITCYI----PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+T V + G +I I + ++ + +
Sbjct: 61 NTH--VYKDGKVIVIGIQLYKDREKMYYFAYEIK-DGKAEINREIDPIKYMKDHK 112
>gi|253730664|ref|ZP_04864829.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253725508|gb|EES94237.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|323440290|gb|EGA98004.1| hypothetical protein SAO11_1027 [Staphylococcus aureus O11]
gi|323443457|gb|EGB01073.1| hypothetical protein SAO46_0682 [Staphylococcus aureus O46]
Length = 125
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 36/115 (31%), Gaps = 8/115 (6%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K + + + ++GC + +K + + +NK + + + + +
Sbjct: 1 MMKRILVVFLMLAIVLAGCSNKGEKYQKDIDKVYKEQNQMNKIASKVQNTIKTDIKQEDS 60
Query: 60 DTGIVVSRIGDMITCYI----PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+T V + G +I I + ++ + +
Sbjct: 61 NTH--VYKDGKVIVIGIQLYKDREKMYYFAYEIK-DGKAEINREIDPIKYMKDHK 112
>gi|229186334|ref|ZP_04313499.1| hypothetical protein bcere0004_38790 [Bacillus cereus BGSC 6E1]
gi|228597128|gb|EEK54783.1| hypothetical protein bcere0004_38790 [Bacillus cereus BGSC 6E1]
Length = 252
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 6 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 63
Query: 60 DTGIVVSRIGDMITCYI 76
G D + +
Sbjct: 64 TQGKEKVTDADDVKFEV 80
>gi|78484803|ref|YP_390728.1| hypothetical protein Tcr_0458 [Thiomicrospira crunogena XCL-2]
gi|78363089|gb|ABB41054.1| hypothetical protein Tcr_0458 [Thiomicrospira crunogena XCL-2]
Length = 188
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR 42
+K+L + M + +S C + K +S T VN
Sbjct: 1 MKKLFVVMMAVGVLSACSMTPENKSDSKATQSEATQAVNND 41
>gi|325281084|ref|YP_004253626.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
20712]
gi|324312893|gb|ADY33446.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
Length = 367
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 36/112 (32%), Gaps = 14/112 (12%)
Query: 70 DMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD-SIGTLKNNL 127
D + F + + + + + T + I + D G + N
Sbjct: 256 DSAALTARQDIFFALNSSVILASETAKIDSLVAFMKTHTETQVVITGYADVQTGNPRYNK 315
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKY---PIDTNDTKVGRQNNQ 176
++SQ RA+ + + L+ S I+V P+ + N+
Sbjct: 316 VLSQRRAEQV-AVLLTVNGISRERITVFAKGDTEQPFPV--------MEQNR 358
>gi|304388763|ref|ZP_07370821.1| outer membrane receptor family iron transporter [Neisseria
meningitidis ATCC 13091]
gi|304337327|gb|EFM03503.1| outer membrane receptor family iron transporter [Neisseria
meningitidis ATCC 13091]
Length = 502
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 21/87 (24%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 16 MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPAAPVVAEKETEVKEDAPQAGSQG 75
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ + + +
Sbjct: 76 QDVPSKQGSQDMAAVSAENTGNGGSAT 102
>gi|260886828|ref|ZP_05898091.1| hypothetical protein SELSPUOL_00661 [Selenomonas sputigena ATCC
35185]
gi|330839366|ref|YP_004413946.1| hypothetical protein Selsp_1530 [Selenomonas sputigena ATCC
35185]
gi|260863427|gb|EEX77927.1| hypothetical protein SELSPUOL_00661 [Selenomonas sputigena ATCC
35185]
gi|329747130|gb|AEC00487.1| hypothetical protein Selsp_1530 [Selenomonas sputigena ATCC
35185]
Length = 221
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 9/93 (9%), Positives = 29/93 (31%), Gaps = 5/93 (5%)
Query: 1 MI--KEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M+ K L +++ M ++GCG ++ + + + E +
Sbjct: 5 MMLAKRLLLPFIAVLAMFLVAGCGDKPKDTADKAVLAYAELYAYGDTDKTEATGLTKEQK 64
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFL 88
++ + + + V+ ++
Sbjct: 65 EKISEALLTEVDQQFQSMMLSKDNAVAVTNYYI 97
>gi|257460422|ref|ZP_05625523.1| thioredoxin domain protein [Campylobacter gracilis RM3268]
gi|257441753|gb|EEV16895.1| thioredoxin domain protein [Campylobacter gracilis RM3268]
Length = 232
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 2/79 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ L + +SGCG +KK N N+ +S E
Sbjct: 1 MKKFLLLCLAIFVLSGCG--DDSQKKTGSAGENPAASENQIVKNSAQDKNGERIGGESGE 58
Query: 62 GIVVSRIGDMITCYIPVHV 80
+ + + V
Sbjct: 59 EVAFTPFKTGERFTLKSVV 77
>gi|160880219|ref|YP_001559187.1| cell wall hydrolase/autolysin [Clostridium phytofermentans ISDg]
gi|160428885|gb|ABX42448.1| cell wall hydrolase/autolysin [Clostridium phytofermentans ISDg]
Length = 274
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 7/109 (6%)
Query: 1 MIKELGLSMFIMTT--ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K L + M + GC +S E +KV + N ++ G++ E L
Sbjct: 1 MKKILKMLAVCMVFVMLVGCSKSSGEPEKVNPNDQNQSNGNGTEDGNNQKGEEGTNPGNL 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ-LIATILNKF 106
+ + D+I P H + + L +A + ++
Sbjct: 61 PEGDLA----EDVILVLDPGHGGVFGGASYDGRNEKDLTLKVANYVKEY 105
>gi|134278039|ref|ZP_01764754.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|134251689|gb|EBA51768.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
Length = 416
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 20/64 (31%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L++ M ++GCG + + + + + G+ T
Sbjct: 1 MKRYVLTVLAMVFLAGCGSGNGSDESGNAPANTSSAPASTIPGAGQYPPAASANPTYIGT 60
Query: 62 GIVV 65
V
Sbjct: 61 YAAV 64
>gi|159045920|ref|YP_001534714.1| chemotaxis protein MotB [Dinoroseobacter shibae DFL 12]
gi|157913680|gb|ABV95113.1| chemotaxis protein MotB [Dinoroseobacter shibae DFL 12]
Length = 272
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 56/178 (31%), Gaps = 11/178 (6%)
Query: 16 SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCY 75
+G S ++ ++ + + L + + + + +
Sbjct: 96 TGGSENSSRSSQLEALRAAEEARMQALSEDLLGLSGESDVAEQLRRHVSTRVTDRGLVVD 155
Query: 76 IPVH----VSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG---TLKNNLL 128
+ V L +L++I + ++I H S ++
Sbjct: 156 LFDQGEATVFVPGSTELTLLGKALLKVIHEVF-SVVDNPLSITGHVPSQPVVLRERDAWE 214
Query: 129 ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRG 186
+S RA V +S L G + +R + V G A + P N R+EI + G
Sbjct: 215 VSTSRAHVARSTLESYGFAESRIMKVAGQADRKPAAY---PDISSKNNRLEIVLLRNG 269
>gi|121594033|ref|YP_985929.1| hypothetical protein Ajs_1662 [Acidovorax sp. JS42]
gi|120606113|gb|ABM41853.1| protein of unknown function DUF748 [Acidovorax sp. JS42]
Length = 1235
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 15/40 (37%)
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + L++K L IA LN P+ + +
Sbjct: 1054 VLFALGSAELDEKARQQLDKIANELNNRPALKVTVVGWAQ 1093
>gi|87118166|ref|ZP_01074065.1| putative membrane-bound lytic murein transglycosylase
[Marinomonas sp. MED121]
gi|86165800|gb|EAQ67066.1| putative membrane-bound lytic murein transglycosylase
[Marinomonas sp. MED121]
Length = 578
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K+ ++ ++GC + E+ + +N+ + + + + + +D
Sbjct: 1 MTKQTLIAATFCFVLTGCQSLTSEQDQAATQATNEQNSATSNLDADM--IDANLTNEAED 58
Query: 61 TGI 63
+ +
Sbjct: 59 SLV 61
>gi|65321482|ref|ZP_00394441.1| COG0216: Protein chain release factor A [Bacillus anthracis str.
A2012]
gi|118479291|ref|YP_896442.1| hypothetical protein BALH_3706 [Bacillus thuringiensis str. Al
Hakam]
gi|228916728|ref|ZP_04080293.1| hypothetical protein bthur0012_39420 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228947808|ref|ZP_04110095.1| hypothetical protein bthur0007_39350 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229123611|ref|ZP_04252806.1| hypothetical protein bcere0016_38980 [Bacillus cereus 95/8201]
gi|118418516|gb|ABK86935.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
gi|228659746|gb|EEL15391.1| hypothetical protein bcere0016_38980 [Bacillus cereus 95/8201]
gi|228811795|gb|EEM58129.1| hypothetical protein bthur0007_39350 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228842915|gb|EEM87998.1| hypothetical protein bthur0012_39420 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 252
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 6 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 63
Query: 60 DTGIVVSRIGDMITCYI 76
G D + +
Sbjct: 64 TQGKEKVTDADDVKFEV 80
>gi|330950299|gb|EGH50559.1| hypothetical protein PSYCIT7_02617 [Pseudomonas syringae Cit 7]
Length = 640
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 453 DLGSVSFAPGSSDLSAEAQKALDKLSVALKERPDLKLEIEG 493
>gi|325845979|ref|ZP_08169177.1| putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481885|gb|EGC84917.1| putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 223
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 32/93 (34%), Gaps = 7/93 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLH-KSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK++ + + ++ ++GCG +S+ + + S+ E +++
Sbjct: 1 MIKKIFIGLSLLIFLTGCGKSSKRSDDSVEIYNKASLENKDNNLNSNEKSNTKEAVKKVK 60
Query: 60 DTGIVVSRIGDMITC------YIPVHVSFVSEV 86
D + + + I + +
Sbjct: 61 DPYQEIYKQIEGIKFYLSGGSEMESIYFYKDGY 93
>gi|296101556|ref|YP_003611702.1| hypothetical protein ECL_01192 [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295056015|gb|ADF60753.1| hypothetical protein ECL_01192 [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 192
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC D S++ A+ L
Sbjct: 1 MLKKLFFPLVALFMLAGCATPPTTIDVSPKITLPQQDPSLMGVTVSINGADQRQDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQLVTLTASRDLRF 78
>gi|283784260|ref|YP_003364125.1| hypothetical protein ROD_04891 [Citrobacter rodentium ICC168]
gi|282947714|emb|CBG87269.1| putative exported protein [Citrobacter rodentium ICC168]
Length = 192
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + + ++GC D S++ A+ L
Sbjct: 1 MLKKILFPLVAIFMLAGCATPPTTIDVSPKITLPQQDPSLMGVTVSINGADQRQDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQLVTLTASRDLRF 78
>gi|228929138|ref|ZP_04092165.1| hypothetical protein bthur0010_38270 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228830428|gb|EEM76038.1| hypothetical protein bthur0010_38270 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 252
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 6 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 63
Query: 60 DTGIVVSRIGDMITCYI 76
G D + +
Sbjct: 64 TQGKEKVTDADDVKFEV 80
>gi|239624442|ref|ZP_04667473.1| predicted protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520828|gb|EEQ60694.1| predicted protein [Clostridiales bacterium 1_7_47FAA]
Length = 346
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 7/47 (14%), Positives = 15/47 (31%), Gaps = 3/47 (6%)
Query: 1 MIKELGLSMFIMT---TISGCGLASREKKKVFLHKSNDTDIVNKRFG 44
M K++ L + + ++GCG + + G
Sbjct: 1 MKKKIVLLLAAVMAVGMLAGCGKKGNAPASGAVPAEASGQELAVPEG 47
>gi|149907870|ref|ZP_01896538.1| hypothetical protein PE36_19420 [Moritella sp. PE36]
gi|149808876|gb|EDM68807.1| hypothetical protein PE36_19420 [Moritella sp. PE36]
Length = 69
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD 37
M+K + +++F+ +SGC S E S
Sbjct: 1 MMKLMLIAIFMFGFLSGCSNTSGEPTNSEWPDSKRGG 37
>gi|292487464|ref|YP_003530336.1| lipoprotein YajG [Erwinia amylovora CFBP1430]
gi|292898706|ref|YP_003538075.1| lipoprotein [Erwinia amylovora ATCC 49946]
gi|291198554|emb|CBJ45662.1| putative lipoprotein [Erwinia amylovora ATCC 49946]
gi|291552883|emb|CBA19928.1| Uncharacterized lipoprotein yajG precursor [Erwinia amylovora
CFBP1430]
gi|312171568|emb|CBX79826.1| Uncharacterized lipoprotein yajG precursor [Erwinia amylovora
ATCC BAA-2158]
Length = 192
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 4/92 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + + ++GC S + D S++ A+ L
Sbjct: 1 MLKKIIFPLLAVFVLAGCASNSNTLDVSPKIQLPQRDPALMATTVSINGADRRSDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
V+R G ++T + F+ + LEK+
Sbjct: 60 ---KVNRDGQLVTLTPSRDLRFLLQETLEKQM 88
>gi|291286357|ref|YP_003503173.1| hypothetical protein Dacet_0418 [Denitrovibrio acetiphilus DSM
12809]
gi|290883517|gb|ADD67217.1| conserved hypothetical protein [Denitrovibrio acetiphilus DSM
12809]
Length = 177
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 6/39 (15%), Positives = 15/39 (38%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN 40
+K+L +S+ ++ ++ C E+ T
Sbjct: 1 MKKLLMSLMLVALLAACSQGVVEEGNSETAAPAQTTQDP 39
>gi|227485861|ref|ZP_03916177.1| membrane associated lipoprotein [Anaerococcus lactolyticus ATCC
51172]
gi|227236094|gb|EEI86109.1| membrane associated lipoprotein [Anaerococcus lactolyticus ATCC
51172]
Length = 300
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Query: 1 MIKELGLSM-FIMTTISGCGLASREKKKV--FLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
++K++ LS+ + +GCG K + + N S E +
Sbjct: 13 IMKKILLSLMILGAVFTGCGKKDMPDKADNKAKTEIKTASLSNMANEDSFKFVEGVLKEN 72
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
L + + D + + V E L F L+
Sbjct: 73 LGADNDMAAANVDKFLAMVKDYNQSVGEKNLIGDFKEDLK 112
>gi|37595881|ref|NP_932260.1| hypothetical protein VVP60 [Vibrio vulnificus YJ016]
gi|37201964|dbj|BAC97783.1| hypothetical protein [Vibrio vulnificus YJ016]
Length = 177
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 10/92 (10%), Positives = 32/92 (34%), Gaps = 3/92 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K++ LS+ + ++GC +E + L + +F+ Q Q
Sbjct: 11 IMKKMALSLIALMGLAGCSSTVKEP-PLTLIEVGSKASAQAVIEFDYKNQMADFEYQRQK 69
Query: 61 TGIVVSRIGDMITCYIPVHVSFVS--EVFLEK 90
+ ++ + + + + + +
Sbjct: 70 LVVYINALPEQREFQLCDQSLEDTGCKSAISA 101
>gi|82751082|ref|YP_416823.1| lipoprotein [Staphylococcus aureus RF122]
gi|82656613|emb|CAI81037.1| probable lipoprotein [Staphylococcus aureus RF122]
Length = 304
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKLVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F+ L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFMDNFGLKVKA 83
>gi|327441268|dbj|BAK17633.1| Micrococcal nuclease homologs [Solibacillus silvestris StLB046]
Length = 272
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 28/108 (25%), Gaps = 9/108 (8%)
Query: 1 MIKELGLSMFIMTTISGC---GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K + F ISGC + + + + D E E Q
Sbjct: 1 MNKIIMALFFSALLISGCTEETNTATTSETNTIQSIAASSKETATKYDISDFEEYELQDI 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVF------LEKKFLPMLQLI 99
+ I + G + + + + + L+ +
Sbjct: 61 IDGDTIRIKYNGSSEKVRLLLIDAPETNHETLGEQPFGPEAKEYLKQL 108
>gi|312961581|ref|ZP_07776081.1| OmpA domain protein [Pseudomonas fluorescens WH6]
gi|311284164|gb|EFQ62745.1| OmpA domain protein [Pseudomonas fluorescens WH6]
Length = 306
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 38/117 (32%), Gaps = 14/117 (11%)
Query: 78 VHVSFVSEV---FLEKKFLPMLQLIATILNKFPSTVI---AIQSHTDSIGTLKNNLLISQ 131
V + + L + T L + I + HTD IG N + Q
Sbjct: 187 DVVFNFGKSGPQDISAAGHKALAQLITAL-QHDDAQIKQMQVVGHTDPIGDEAANQQLGQ 245
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT------NDTKVGRQNNQRIEIQI 182
RAD ++S LI + IS + P+ N+R+ + +
Sbjct: 246 RRADTLRSLLIAK-GIPESIISASSAGNREPVVYSCYGNREQRIACYAPNRRVVVTV 301
>gi|289676033|ref|ZP_06496923.1| hypothetical protein PsyrpsF_22355 [Pseudomonas syringae pv.
syringae FF5]
Length = 408
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 225 DLGSVSFAPGSSDLSAEAQKALDKLSVALKERPDLKLEIEG 265
>gi|167463280|ref|ZP_02328369.1| NLPA lipoprotein [Paenibacillus larvae subsp. larvae BRL-230010]
gi|322384280|ref|ZP_08057989.1| methionine ABC transporter substrate binding lipoprotein-like
protein [Paenibacillus larvae subsp. larvae B-3650]
gi|321150928|gb|EFX44354.1| methionine ABC transporter substrate binding lipoprotein-like
protein [Paenibacillus larvae subsp. larvae B-3650]
Length = 275
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 5/96 (5%)
Query: 1 MIKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + L++ + +S CG S+ T +V + + + + +L
Sbjct: 1 MKKAILLALTFILAIGLSACGKKDEANNSQEGSSSSTTKLVVGATSNPHAEILNAVKDKL 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
+ G+ + V + E L+ F
Sbjct: 61 KAEGVELDVKEFNDYVQPNVQL---DEKQLDANFYQ 93
>gi|1945089|dbj|BAA19697.1| ydhF [Bacillus subtilis]
Length = 254
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 8/90 (8%), Positives = 26/90 (28%), Gaps = 8/90 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+++ + + ++GC + +K+ + K S +D +
Sbjct: 18 IMRRILSILVFAIMLAGCSSNASTEKQHA-----GGEKTVKAEPQSTSSQKDSTDDYQPN 72
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ + R + + L+
Sbjct: 73 SQVTDDRTLHKVGQTFSDD---KGKAVLKD 99
>gi|313672266|ref|YP_004050377.1| outer membrane chaperone skp (omph) [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939022|gb|ADR18214.1| outer membrane chaperone Skp (OmpH) [Calditerrivibrio nitroreducens
DSM 19672]
Length = 173
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 40/107 (37%), Gaps = 1/107 (0%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L L ++ + G A+ + + K+ D K S+ K E Q ++
Sbjct: 1 MKRLFLVGLMLIFMGGLAFANSKIAVFDMQKALDDSDAGKAAVESMKKEYQELQKEIDVK 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ + ++ D I + + ++ ++ L+ + I+
Sbjct: 61 SLELKKMQDEINAQSAILSDDAKQSKMD-EYQKKLKDLQRIIKDAND 106
>gi|251781902|ref|YP_002996204.1| manganese-binding protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390531|dbj|BAH80990.1| manganese-binding protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 310
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 34/113 (30%), Gaps = 5/113 (4%)
Query: 1 MIKELGL---SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL--DKAEDEFQ 55
M K++ L + + C + + K K T+ + ++ DK +
Sbjct: 1 MKKKISLILSAFLAAFLLVACSSSGSQADKSDKLKVVVTNSILADMTKTIAGDKIDLHSI 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ + + + + V F + + LE + K +
Sbjct: 61 VPIGQDPHEYEPLPEDVEKTNNADVIFYNGINLEDGGQAWFTKLVKNAQKKKN 113
>gi|154174582|ref|YP_001408113.1| thiredoxin [Campylobacter curvus 525.92]
gi|112803125|gb|EAU00469.1| thiredoxin [Campylobacter curvus 525.92]
Length = 196
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 37/128 (28%), Gaps = 18/128 (14%)
Query: 2 IKELGLSMFIMTTISGCG---LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
K +++ GCG + + ++N TD + + + D L
Sbjct: 3 FKNTIIALSCAFLFFGCGGDDKKNGQTSSDAQIEANKTDANLSQNSAKSEPVVDLHLNLL 62
Query: 59 QDTGIVVSRIGDMITCYIPVH----VSFVS-----EVF------LEKKFLPMLQLIATIL 103
I + + D V F + L +KF L +I +L
Sbjct: 63 NGKTINLQKRKDGFDIKDNDKATLFVFFATWCPPCRAEIPHLNNLSEKFKEELNIIGVLL 122
Query: 104 NKFPSTVI 111
+ +
Sbjct: 123 EEKNEQEV 130
>gi|157164388|ref|YP_001467102.1| putative chemotaxis protein MotB [Campylobacter concisus 13826]
gi|112801393|gb|EAT98737.1| putative chemotaxis protein MotB [Campylobacter concisus 13826]
Length = 363
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 48/132 (36%), Gaps = 13/132 (9%)
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEV-----FLEKKFLPMLQLIATILNKFPST-----VI 111
G + + + V F ++++ L +L I
Sbjct: 212 GNSIEIDPNSGALKLSSSVLFDKGSAVLKEEVKEELKATLSKYFDVLLNDKEIASNIDQI 271
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN--RFISVRGFAYKYPIDTNDTK 169
I+ TDS G+ NL +SQ+RA + ++ + + + G +Y + D
Sbjct: 272 VIEGFTDSDGSYIYNLELSQKRAYAVMEFINSFSDDARLRKLLVASGRSYNELVFK-DGA 330
Query: 170 VGRQNNQRIEIQ 181
+ ++RIEI+
Sbjct: 331 EDKDASRRIEIK 342
>gi|291459268|ref|ZP_06598658.1| D-methionine ABC transporter, periplasmic D-methionine-binding
protein [Oribacterium sp. oral taxon 078 str. F0262]
gi|291418522|gb|EFE92241.1| D-methionine ABC transporter, periplasmic D-methionine-binding
protein [Oribacterium sp. oral taxon 078 str. F0262]
Length = 318
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 33/99 (33%), Gaps = 2/99 (2%)
Query: 14 TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT 73
++GC + + K K+ +++ + + + E + +D +
Sbjct: 18 LLAGCAASGSDSAKEGSTKAAESEAESGSDKAEKESGESKEAGSSKDNADGKESKAEGEE 77
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQL--IATILNKFPSTV 110
I + S + + P L+ I + ++ V
Sbjct: 78 VTIKIAASPSPHAKILEAAKPELEKRGIKLEIKEYNDYV 116
>gi|170725319|ref|YP_001759345.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Shewanella
woodyi ATCC 51908]
gi|169810666|gb|ACA85250.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Shewanella
woodyi ATCC 51908]
Length = 215
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 2/84 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA--EDEFQMQLQ 59
+K+L LS+ +T+ CG S + +D + E + + L
Sbjct: 1 MKKLILSLVFGSTLVACGGGSDSGDTSVPPSPEPAPELAADVCYLMDTSMGEVKLAIDLT 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFV 83
+T + + + V F
Sbjct: 61 NTPVTGNNFKQYVDEGFYDGVIFH 84
>gi|320577124|gb|ADW54071.1| outer membrane protein A [endosymbiont of Columbicola columbae]
Length = 250
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ + L + + ++ + + + +TD IG+ N +SQ R
Sbjct: 184 SDVLFNFDKAMLKPEGQQALDQLYSKMSAMDPKDSSVIVLGYTDRIGSDAYNQKLSQARV 243
Query: 135 DVIKSY 140
+ SY
Sbjct: 244 QSVVSY 249
>gi|315124518|ref|YP_004066522.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315018240|gb|ADT66333.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 186
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 12/161 (7%), Positives = 38/161 (23%), Gaps = 10/161 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K+ + + + +S C +V N + G K + +
Sbjct: 1 MFKKFLIFIVPILFLSACATKQDTFAQVNQISKNSQCSSCESPGGFEAKIKGLLYISDVG 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
++ + L+ + +L + + + +++
Sbjct: 61 IQCCANKRTLDTGIALKKVYLHRF-YDLK-EGQKVLNA--------KGKKLFVDVNFNAV 110
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ V+ + S + +
Sbjct: 111 FYTYLKQELEARGIVVLDNNDQNSPYVSKIDLEFISYGATQ 151
>gi|257875403|ref|ZP_05655056.1| phosphate ABC transporter [Enterococcus casseliflavus EC20]
gi|257809569|gb|EEV38389.1| phosphate ABC transporter [Enterococcus casseliflavus EC20]
Length = 285
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 36/118 (30%), Gaps = 13/118 (11%)
Query: 1 MIKELGL---SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+L L + ++ +SGC + T + + ++ +EFQ
Sbjct: 1 MMKKLKLLSPIIGLVILLSGCAS-------WADRGESITAVGSSALQPLVETVAEEFQNS 53
Query: 58 LQDTGIVVSRIGDMITCY-IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
I V G + + L + P + A L + I
Sbjct: 54 NPGRFINVQGGGSGTGLSQVQAGAVDIGNSDLFAEEKPGID--ADALVDHRVATVGIT 109
>gi|257865775|ref|ZP_05645428.1| phosphate ABC transporter [Enterococcus casseliflavus EC30]
gi|257872110|ref|ZP_05651763.1| phosphate ABC transporter [Enterococcus casseliflavus EC10]
gi|257799709|gb|EEV28761.1| phosphate ABC transporter [Enterococcus casseliflavus EC30]
gi|257806274|gb|EEV35096.1| phosphate ABC transporter [Enterococcus casseliflavus EC10]
Length = 285
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 36/118 (30%), Gaps = 13/118 (11%)
Query: 1 MIKELGL---SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+L L + ++ +SGC + T + + ++ +EFQ
Sbjct: 1 MMKKLKLLSPIIGLVILLSGCAS-------WADRGESITAVGSSALQPLVETVAEEFQNS 53
Query: 58 LQDTGIVVSRIGDMITCY-IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
I V G + + L + P + A L + I
Sbjct: 54 NPGRFINVQGGGSGTGLSQVQAGAVDIGNSDLFAEEKPGID--ADALVDHRVATVGIT 109
>gi|57237916|ref|YP_179164.1| outer membrane liproprotein MapA [Campylobacter jejuni RM1221]
gi|86150437|ref|ZP_01068662.1| outer membrane liproprotein MapA [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|86151111|ref|ZP_01069327.1| outer membrane liproprotein MapA [Campylobacter jejuni subsp.
jejuni 260.94]
gi|86152876|ref|ZP_01071081.1| outer membrane liproprotein MapA [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|88596210|ref|ZP_01099447.1| outer membrane liproprotein MapA [Campylobacter jejuni subsp.
jejuni 84-25]
gi|148926063|ref|ZP_01809749.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8486]
gi|157415286|ref|YP_001482542.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 81116]
gi|205355786|ref|ZP_03222555.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8421]
gi|218562645|ref|YP_002344424.1| putative liproprotein [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|166232902|sp|A8FM78|MAPA_CAMJ8 RecName: Full=Outer membrane lipoprotein mapA; Flags: Precursor
gi|166232903|sp|P0C633|MAPA_CAMJE RecName: Full=Outer membrane lipoprotein mapA; Flags: Precursor
gi|804978|emb|CAA56437.1| mapA [Campylobacter jejuni]
gi|57166720|gb|AAW35499.1| outer membrane liproprotein MapA [Campylobacter jejuni RM1221]
gi|85839032|gb|EAQ56296.1| outer membrane liproprotein MapA [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|85842281|gb|EAQ59527.1| outer membrane liproprotein MapA [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85843761|gb|EAQ60971.1| outer membrane liproprotein MapA [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|88191051|gb|EAQ95023.1| outer membrane liproprotein MapA [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112360351|emb|CAL35147.1| putative liproprotein [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|145845542|gb|EDK22634.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8486]
gi|157386250|gb|ABV52565.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 81116]
gi|205346220|gb|EDZ32854.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8421]
gi|284926259|gb|ADC28611.1| outer membrane liproprotein MapA [Campylobacter jejuni subsp.
jejuni IA3902]
gi|307747928|gb|ADN91198.1| Outer membrane lipoprotein mapA [Campylobacter jejuni subsp. jejuni
M1]
gi|315058472|gb|ADT72801.1| Outer membrane liproprotein mapA precursor [Campylobacter jejuni
subsp. jejuni S3]
gi|315927965|gb|EFV07287.1| outer membrane lipoprotein mapA [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315930379|gb|EFV09456.1| outer membrane lipoprotein mapA [Campylobacter jejuni subsp. jejuni
305]
gi|315932159|gb|EFV11102.1| outer membrane lipoprotein mapA [Campylobacter jejuni subsp. jejuni
327]
Length = 214
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 12/161 (7%), Positives = 38/161 (23%), Gaps = 10/161 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K+ + + + +S C +V N + G K + +
Sbjct: 1 MFKKFLIFIVPILFLSACATKQDTFAQVNQISKNSQCSSCESPGGFEAKIKGLLYISDVG 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
++ + L+ + +L + + + +++
Sbjct: 61 IQCCANKRTLDTGIALKKVYLHRF-YDLK-EGQKVLNA--------KGKKLFVDVNFNAV 110
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ V+ + S + +
Sbjct: 111 FYTYLKQELEARGIVVLDNNDQNSPYVSKIDLEFISYGATQ 151
>gi|306821382|ref|ZP_07454990.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550600|gb|EFM38583.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 363
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 10/73 (13%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK--------RFGSSLDKAED 52
M K L + + T++GC ++ K N T K +G +D +
Sbjct: 1 MKKILLALVLCIFTLAGCQSSNTSNNATDSTKENTTQTAEKSNVTLNIYNWGDYIDP--E 58
Query: 53 EFQMQLQDTGIVV 65
+ TGI V
Sbjct: 59 VLEEFTSKTGIKV 71
>gi|94501278|ref|ZP_01307799.1| hypothetical protein RED65_02659 [Oceanobacter sp. RED65]
gi|94426549|gb|EAT11536.1| hypothetical protein RED65_02659 [Oceanobacter sp. RED65]
Length = 236
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 47/157 (29%), Gaps = 23/157 (14%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI---LN 104
+ + EF L G + + E L +F +L +
Sbjct: 66 EDLQKEFAPDLPQWGAEID-EDLTFRFNKTDLLFAKGESSLNPEFQAILSDFFPRYLAII 124
Query: 105 KFPSTV-----IAIQSHTDSIG--------TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
P + I+ HT S NN+ +SQ R +YL+ +
Sbjct: 125 TQPQYRDDILEVRIEGHTSSGWLGAKDKDEAYINNMALSQARTRSTLAYLLNLPRVQDEK 184
Query: 152 ------ISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
++ G + I + ++R+E ++
Sbjct: 185 TWLKTYLTANGLSSAKVIRDETGIESGERSRRVEFKV 221
>gi|7228690|gb|AAF42579.1|AF226430_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
gi|7228720|gb|AAF42594.1|AF226445_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
gi|32455023|gb|AAP83191.1| putative lipoprotein GNA2132 [Neisseria meningitidis]
gi|222107868|gb|ACM44954.1| Gna2132 [Neisseria meningitidis]
gi|222107870|gb|ACM44955.1| Gna2132 [Neisseria meningitidis]
gi|224830214|gb|ACN66296.1| GNA2132 [Neisseria meningitidis]
gi|254547343|gb|ACT66702.1| Gna2132 [Neisseria meningitidis]
gi|325135358|gb|EGC57979.1| periplasmic protein [Neisseria meningitidis M0579]
gi|325203109|gb|ADY98563.1| dextranase precursor [Neisseria meningitidis M01-240149]
gi|325208978|gb|ADZ04430.1| putative iron transporter, outer membrane receptor family
[Neisseria meningitidis NZ-05/33]
Length = 492
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 23/87 (26%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAKEDAPQAGSQG 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF 87
G ++ G + +
Sbjct: 61 QGAPSAQGGQDMAAVSEENTGNGGAAA 87
>gi|303234920|ref|ZP_07321545.1| ApbE family protein [Finegoldia magna BVS033A4]
gi|302494038|gb|EFL53819.1| ApbE family protein [Finegoldia magna BVS033A4]
Length = 373
Score = 38.9 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 18/53 (33%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
+K+L L +T + GC E K V + + +K E
Sbjct: 1 MKKLLLVFLTLTMLVGCSQNKTENKPVAKDPAPQVKESDVSSSKDFEKHEATL 53
>gi|302380859|ref|ZP_07269322.1| ApbE family protein [Finegoldia magna ACS-171-V-Col3]
gi|302311354|gb|EFK93372.1| ApbE family protein [Finegoldia magna ACS-171-V-Col3]
Length = 373
Score = 38.9 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 18/53 (33%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
+K+L L +T + GC E K V + + +K E
Sbjct: 1 MKKLLLVFLTLTMLVGCSQNKTENKPVAKDPAPQVKESDVSSSKDFEKHEATL 53
>gi|169824175|ref|YP_001691786.1| putative thiamine biosynthesis lipoprotein [Finegoldia magna ATCC
29328]
gi|167830980|dbj|BAG07896.1| putative thiamine biosynthesis lipoprotein [Finegoldia magna ATCC
29328]
Length = 373
Score = 38.9 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 18/53 (33%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
+K+L L +T + GC E K V + + +K E
Sbjct: 1 MKKLLLVFLTLTMLVGCSQNKTENKPVAKDPAPQVKESDVSSSKDFEKHEATL 53
>gi|229093150|ref|ZP_04224268.1| hypothetical protein bcere0021_38850 [Bacillus cereus Rock3-42]
gi|228690124|gb|EEL43918.1| hypothetical protein bcere0021_38850 [Bacillus cereus Rock3-42]
Length = 252
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 6 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 63
Query: 60 DTGIVVSRIGDMITCYI 76
G D + +
Sbjct: 64 TQGKEKVTDADDVKFEV 80
>gi|229171139|ref|ZP_04298733.1| CamS sex pheromone cAM373 [Bacillus cereus MM3]
gi|228612317|gb|EEK69545.1| CamS sex pheromone cAM373 [Bacillus cereus MM3]
Length = 397
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 35/112 (31%), Gaps = 17/112 (15%)
Query: 2 IKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ--MQL 58
+K++ L++ + +SGC + + +KV + + D+
Sbjct: 1 MKKIALAVLSLCLLVSGCSADADKDEKVVEKSGKAKEQAIVPKYAISDEYYKATIPFQAG 60
Query: 59 QDTGIVVSRIGDMITCYIPV--------------HVSFVSEVFLEKKFLPML 96
G+VV + + + F L+ + + ML
Sbjct: 61 AARGLVVQGVSNRLDIDEFETGLMRIAKESFSTKDHFFKGGSTLDTQNVQML 112
>gi|32455021|gb|AAP83190.1| putative lipoprotein GNA2132 [Neisseria meningitidis]
Length = 492
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 23/87 (26%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAKEDAPQAGSQG 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF 87
G ++ G + +
Sbjct: 61 QGAPSAQGGQDMAAVSEENTGNGGAAA 87
>gi|323489902|ref|ZP_08095124.1| hypothetical protein GPDM_11140 [Planococcus donghaensis MPA1U2]
gi|323396409|gb|EGA89233.1| hypothetical protein GPDM_11140 [Planococcus donghaensis MPA1U2]
Length = 191
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ + ++ T++ C + + + N +++ E++ +
Sbjct: 1 MKKMIIMAGLILTLAACSNSEEPSVNENTVEDGNATSENNAVNHGIEEKEEKTEDI---- 56
Query: 62 GIVVSRIGDMITCYIP 77
G V G++I +P
Sbjct: 57 GFTVDEQGNIIAADVP 72
>gi|295703643|ref|YP_003596718.1| ferrichrome import ABC transporter ferrichrome-binding protein
FhuD [Bacillus megaterium DSM 319]
gi|294801302|gb|ADF38368.1| ferrichrome import ABC transporter, ferrichrome-binding protein
FhuD [Bacillus megaterium DSM 319]
Length = 307
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 9/101 (8%)
Query: 2 IKELGL--SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L L + + IS C S E K ++ ++ + + K
Sbjct: 1 MKKLLLPFMLIFILLISACSSGSTESKNDSSKGNSGSETITYQSEDGPVKVPA------N 54
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLI 99
+VV + V++ V + +F L+ +
Sbjct: 55 PKRVVVLGSYAGNVMSLGVNIVGVDSWSKMNPRFEKKLKGV 95
>gi|291529087|emb|CBK94673.1| hypothetical protein ERE_28650 [Eubacterium rectale M104/1]
Length = 124
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 27/98 (27%), Gaps = 11/98 (11%)
Query: 1 MIKELGL----SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K+L +M +GCG + ++ K +S K G + E E
Sbjct: 1 MKKKLITIVIGAMLCAGLFAGCGQSDTKQDKAAGTESAK-QADTKDEGEKGSQEEKELTG 59
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
+ D M + + L
Sbjct: 60 TIDD------IKDFMFVVTDDKDTPYSFNFDEKPDGLE 91
>gi|239948444|ref|ZP_04700197.1| protein-disulfide oxidoreductase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922720|gb|EER22744.1| protein-disulfide oxidoreductase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 278
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 11/126 (8%), Positives = 36/126 (28%), Gaps = 10/126 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++ + + + + +S C + K + + + + S E ++
Sbjct: 1 MRSIFIVLIFLLFLSSCSEEKAQDKNHEEKQIIEQETLQNNETSKETNQEAVNSENTAES 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM-----LQLIATILNKFPSTVIAIQSH 116
+ + P + + P+ + +L S VI ++
Sbjct: 61 IVPANDNNQTDEVSTPASQEQKN-----PEIKPVKVTFKIDNNDMVLGNKKSNVIVVEYF 115
Query: 117 TDSIGT 122
+ +
Sbjct: 116 SPTCPH 121
>gi|222107896|gb|ACM44968.1| Gna2132 [Neisseria meningitidis]
Length = 492
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 23/87 (26%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAKEDAPQAGSQG 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF 87
G ++ G + +
Sbjct: 61 QGAPSAQGGQDMAAVSEENTGNGGAAA 87
>gi|158522486|ref|YP_001530356.1| peptidoglycan-binding LysM [Desulfococcus oleovorans Hxd3]
gi|158511312|gb|ABW68279.1| Peptidoglycan-binding LysM [Desulfococcus oleovorans Hxd3]
Length = 632
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 37/125 (29%), Gaps = 5/125 (4%)
Query: 1 MIKELGLSMFIMTTI-SGCGLASREKKKVFLHKSNDTDIVNK---RFGSSLDKAEDEFQM 56
MI+ L ++ + + +GC +K K T N + ++K +
Sbjct: 1 MIRHLFIAAALTFLLTAGCPAPVTTLQKGGPAKPARTPSANSYYLFTQAQIEKEKGSLDS 60
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
V+ D + + F+ + + ++ + + I +
Sbjct: 61 ATAWMTRAVAADPDSAYLKRELAILFLMKKE-NDRARQTVEQLLAVHPDDVDGQILLAGI 119
Query: 117 TDSIG 121
G
Sbjct: 120 LHHQG 124
>gi|332880832|ref|ZP_08448503.1| hypothetical protein HMPREF9074_04282 [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332681215|gb|EGJ54141.1| hypothetical protein HMPREF9074_04282 [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 284
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L + ++ C + +K + F + + V + L++ ++Q+
Sbjct: 1 MKKIFLCVMCAAALTACNNGANKKDQAFAEERDSLMQVINDKDTELNEIMGTVN-EIQEG 59
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
++ IT S S+ + + + +A
Sbjct: 60 FRRINEAEGRITVNDGNMESETSKQAIRENMQYIQDAMAQN 100
>gi|332359306|gb|EGJ37127.1| lipoprotein [Streptococcus sanguinis SK49]
Length = 180
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 7/36 (19%), Positives = 18/36 (50%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD 37
+K++ L+ + T++ C S+ K++ +S
Sbjct: 1 MKKILLASACLLTLTACSTTSQNKQENTPKQSQSQS 36
>gi|296122828|ref|YP_003630606.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776]
gi|296015168|gb|ADG68407.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776]
Length = 296
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 57/185 (30%), Gaps = 17/185 (9%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
++ F++ + G ++ K + D E + I
Sbjct: 20 MMAFFLVMWLVG----QSKEVKTAVAHYFQPPPGAAAAELDPD-VEPSLFPPRAELKIFH 74
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTL-- 123
+ + L++ + L+ + L P+ I I+ H
Sbjct: 75 DIEKTRNVGTM--VLFAEKAYALDESAINQLEALLPDLLGKPN-KIEIRGHASRRERADT 131
Query: 124 ---KNNLLISQERADVIKSYLIQRGVSSNR-FISVRGFAYKYPI-DTNDTKVGRQNNQRI 178
++ +S R+ +K +L+ +GV R +S + P + N R+
Sbjct: 132 QTKEDPWQLSWMRSQAVKDFLVSKGVELGRLRLSQD--GAEEPYSAKKLDAEHQAQNARV 189
Query: 179 EIQIF 183
E+ +
Sbjct: 190 EVFLI 194
>gi|257065646|ref|YP_003151902.1| extracellular solute-binding protein family 1 [Anaerococcus
prevotii DSM 20548]
gi|256797526|gb|ACV28181.1| extracellular solute-binding protein family 1 [Anaerococcus
prevotii DSM 20548]
Length = 441
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 32/97 (32%), Gaps = 9/97 (9%)
Query: 1 MIKEL--GLSMFIMTTISGCGLASREKKK--VFLHKSNDTDIVNKRFGSSLD---KAEDE 53
M +L +++ + ++ CG +K + I + +D KA +
Sbjct: 1 MKNKLKMLMALSLSVVLAACGGKGADKGEEAAADPGDVSGKISVQVEKEWMDHYEKAAER 60
Query: 54 FQMQLQDTGIVVSRIG--DMITCYIPVHVSFVSEVFL 88
+ + + I + +G D + + L
Sbjct: 61 VKEKYPNAEIELKEVGAFDHLDILDQTDANNEDVADL 97
>gi|116512573|ref|YP_811480.1| ABC-type phosphate transport system, periplasmic component
[Lactococcus lactis subsp. cremoris SK11]
gi|116108227|gb|ABJ73367.1| phosphate ABC transporter substrate-binding protein, PhoT family
[Lactococcus lactis subsp. cremoris SK11]
Length = 283
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 21/164 (12%), Positives = 54/164 (32%), Gaps = 22/164 (13%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM- 56
M K++ +++ + ++ CG +++ + +V S + + DE M
Sbjct: 1 MKKKIFIALMASVSLFALAACGSGNKQVT--AGGSTALQPMVEHASMSYMKQNPDEIIMV 58
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
Q +G+ ++++ + + + + I +A+
Sbjct: 59 QGGGSGVGLAQVAAGSFQIGNSDIFAEEKSGI------AVDKIIDH-------KVAVIGF 105
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRG---VSSNRFISVRGF 157
I +SQ+ I + I ++ I+V G
Sbjct: 106 APIINKKLKVKNLSQQELIDIFTGKITNWKEVGGQDQKITVIGR 149
>gi|57505954|ref|ZP_00371878.1| lipoprotein, putative [Campylobacter upsaliensis RM3195]
gi|57015754|gb|EAL52544.1| lipoprotein, putative [Campylobacter upsaliensis RM3195]
Length = 150
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 22/78 (28%), Gaps = 1/78 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQ 59
++K L + S C K K S +V S LDK EDE L
Sbjct: 3 ILKNTALILSTALLFSACATKQNAKAKEPSVDSELRLLVGDLKYSDLDKQDEDELIKALL 62
Query: 60 DTGIVVSRIGDMITCYIP 77
++
Sbjct: 63 KNSPSFAQNNQQSAIKEN 80
>gi|296128519|ref|YP_003635769.1| phosphate ABC transporter, periplasmic phosphate- binding protein
[Cellulomonas flavigena DSM 20109]
gi|296020334|gb|ADG73570.1| phosphate ABC transporter, periplasmic phosphate- binding protein
[Cellulomonas flavigena DSM 20109]
Length = 372
Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 27/97 (27%), Gaps = 11/97 (11%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD---- 60
+ L+ + T++ C S + + ++ G+ E +
Sbjct: 12 IALTGALALTLAACSSGSSAE-PGATSGGDSAELSGSLAGAGATSQEKAVAGWIAGFNDL 70
Query: 61 -TGIVVSRI-----GDMITCYIPVHVSFVSEVFLEKK 91
G+ VS G S+ L++
Sbjct: 71 QPGVTVSYDAVGSGGGREQFLAGAVQFAGSDAALKED 107
>gi|323691138|ref|ZP_08105418.1| hypothetical protein HMPREF9475_00279 [Clostridium symbiosum
WAL-14673]
gi|323504835|gb|EGB20617.1| hypothetical protein HMPREF9475_00279 [Clostridium symbiosum
WAL-14673]
Length = 380
Score = 38.9 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 8/82 (9%), Positives = 27/82 (32%), Gaps = 2/82 (2%)
Query: 1 MIKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K++ +++ + ++ CG + + + + +++D
Sbjct: 1 MKKQIKSVMALLMAGMLTACGSSGASESPAKTPDTEAPSAAEAGTQDAGTESKDTGTADY 60
Query: 59 QDTGIVVSRIGDMITCYIPVHV 80
+VV G + ++
Sbjct: 61 SGETLVVQVWGGTYEETLRNYI 82
>gi|317127951|ref|YP_004094233.1| NMT1/THI5 like domain protein [Bacillus cellulosilyticus DSM
2522]
gi|315472899|gb|ADU29502.1| NMT1/THI5 like domain protein [Bacillus cellulosilyticus DSM
2522]
Length = 352
Score = 38.9 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 16/44 (36%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG 44
M+K L L + ++ I+ CG + + + G
Sbjct: 4 MLKGLVLMVALLFVIAACGSENTVESTPAEQEDTTKGESVDETG 47
>gi|148257389|ref|YP_001241974.1| hypothetical protein BBta_6143 [Bradyrhizobium sp. BTAi1]
gi|146409562|gb|ABQ38068.1| Putative outer membrane protein [Bradyrhizobium sp. BTAi1]
Length = 222
Score = 38.9 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 19/167 (11%), Positives = 52/167 (31%), Gaps = 10/167 (5%)
Query: 9 MFIMTTISGCGLASREKKKVFLH-------KSNDTDIVNKRFGSSLDKAEDEFQMQLQ-D 60
+ I+ A ++ ++ T + + ++++ + +
Sbjct: 11 LLAAVVITAIAPARSQEVTRDDIVRQLARFEAAPTLDLPALKQQTQERSKLRGRNEPPPQ 70
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL--NKFPSTVIAIQSHTD 118
++ + + + IA + ++ I H +
Sbjct: 71 KRPPIAPELMNLPALNVDIQFDQDTPIVRPDSYQTVGRIADAMVHSELLPYTFLIVGHVE 130
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+ G + N+++SQ RAD I+ L S + + G + +D
Sbjct: 131 ANGRREPNVILSQRRADAIRDILANTFKISVKRLQSIGLGEEQLLDP 177
>gi|121613247|ref|YP_001000708.1| outer membrane liproprotein MapA [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005629|ref|ZP_02271387.1| outer membrane liproprotein MapA [Campylobacter jejuni subsp.
jejuni 81-176]
gi|87249164|gb|EAQ72125.1| outer membrane liproprotein MapA [Campylobacter jejuni subsp.
jejuni 81-176]
Length = 214
Score = 38.9 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 12/161 (7%), Positives = 39/161 (24%), Gaps = 10/161 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K+ + + + +S C +V N + G K + +
Sbjct: 1 MFKKFLIFIVPILFLSACATKQDTFAQVNQISKNSQCSSCESPGGFEAKIKGLLYISDVG 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
++ + L+++ +L + + + +++
Sbjct: 61 IQCCANKRTLDTGIALKKVYLHRF-YDLKEE-QKVLNA--------KGKKLFVDVNFNAV 110
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+ V+ + S + +
Sbjct: 111 FYTYLKQELEARGIVVLDNNDQNSPYVSKIDLEFISYGATQ 151
>gi|323441228|gb|EGA98904.1| hypothetical protein SAO46_2801 [Staphylococcus aureus O46]
Length = 304
Score = 38.9 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 25/92 (27%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + + + + AE + +
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNKSNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ G+ F L+ K
Sbjct: 61 HKDKIAKRGEQ---------FFKDNFGLKVKA 83
>gi|269968347|ref|ZP_06182366.1| outer membrane protein OmpA [Vibrio alginolyticus 40B]
gi|269827033|gb|EEZ81348.1| outer membrane protein OmpA [Vibrio alginolyticus 40B]
Length = 275
Score = 38.9 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 16/49 (32%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
L L + LN++P + I +TDS G N
Sbjct: 226 FEFDSAKLTDSVSERLDNFVSFLNEYPQAQVEITGYTDSSGPAAYNQKT 274
>gi|288554814|ref|YP_003426749.1| putative ABC solute binding periplasmic lipoprotein [Bacillus
pseudofirmus OF4]
gi|288545974|gb|ADC49857.1| putative ABC solute binding periplasmic lipoprotein [Bacillus
pseudofirmus OF4]
Length = 276
Score = 38.9 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + LS ++ ++ CG E+ + G D + + L++
Sbjct: 4 LKTVLLSALLVGALAACGSGETEE-TSAAAEDKSKITFGSTAGPYSDMVSNAIKPVLEEK 62
Query: 62 GIVVSRIG 69
G V +
Sbjct: 63 GYEVEVVE 70
>gi|15614591|ref|NP_242894.1| hypothetical protein BH2028 [Bacillus halodurans C-125]
gi|10174647|dbj|BAB05747.1| BH2028 [Bacillus halodurans C-125]
Length = 143
Score = 38.9 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Query: 2 IKELGLSMFIMTT---ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQ 57
+K++ LS+ +T ++ CG + + ++ ++ G+ + ED +
Sbjct: 1 MKKIWLSLMGLTLAVGLAACGSSD-DTSTDAEQEATPSETEEAASGAESEVNGEDVVTLH 59
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVS 84
+Q + + V ++F +
Sbjct: 60 IQADNFSFDQEQYEVPLGATVEITFEN 86
>gi|307720300|ref|YP_003891440.1| hypothetical protein Saut_0379 [Sulfurimonas autotrophica DSM
16294]
gi|306978393|gb|ADN08428.1| hypothetical protein Saut_0379 [Sulfurimonas autotrophica DSM
16294]
Length = 189
Score = 38.9 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKV 28
+K + +++ + GC S E K V
Sbjct: 1 MKNIIIAILAAFLLLGCSSKSDENKNV 27
>gi|226354998|ref|YP_002784738.1| serine proteinase [Deinococcus deserti VCD115]
gi|226316988|gb|ACO44984.1| putative serine proteinase, precursor [Deinococcus deserti
VCD115]
Length = 416
Score = 38.9 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 9/74 (12%), Positives = 26/74 (35%), Gaps = 6/74 (8%)
Query: 1 MIKELGLSMFIMTTISGC-----GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M+K + + + + T++ C G + + + ++ ++ +
Sbjct: 3 MMK-VAVGLTLALTLAACGNTTPGSTANDTDTETVIENAAASSSGSLREQAVPNVAGAAR 61
Query: 56 MQLQDTGIVVSRIG 69
+ IVV + G
Sbjct: 62 NIIPGQYIVVLKEG 75
>gi|328957552|ref|YP_004374938.1| D-methionine-binding lipoprotein MetQ [Carnobacterium sp. 17-4]
gi|328673876|gb|AEB29922.1| D-methionine-binding lipoprotein MetQ [Carnobacterium sp. 17-4]
Length = 286
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 12/110 (10%), Positives = 27/110 (24%), Gaps = 1/110 (0%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MIK+ + ++ CG + + + D + + +
Sbjct: 1 MIKKGLFLSSLALVLAACGTGNSDSGSSSEVATTDGSAEQEEIVIKVASHLPPMTDIVDI 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
G V + +E L + + KF +
Sbjct: 61 AG-EVIAEPYKVELVEVSDNIQYNEALLNDEVDANFAQHKPFMEKFNTER 109
>gi|323483361|ref|ZP_08088750.1| hypothetical protein HMPREF9474_00499 [Clostridium symbiosum
WAL-14163]
gi|323403340|gb|EGA95649.1| hypothetical protein HMPREF9474_00499 [Clostridium symbiosum
WAL-14163]
Length = 380
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 8/82 (9%), Positives = 27/82 (32%), Gaps = 2/82 (2%)
Query: 1 MIKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K++ +++ + ++ CG + + + + +++D
Sbjct: 1 MKKQIKSVMALLMAGMLTACGSSGASESPAKTPDTEAPSAAEAGTQDAGTESKDTGTADY 60
Query: 59 QDTGIVVSRIGDMITCYIPVHV 80
+VV G + ++
Sbjct: 61 SGETLVVQVWGGTYEETLRNYI 82
>gi|32455015|gb|AAP83187.1| putative lipoprotein GNA2132 [Neisseria meningitidis]
Length = 426
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 20/67 (29%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTPSKPAAPVVAEKETEVKEDAPQAGSQG 60
Query: 61 TGIVVSR 67
G ++
Sbjct: 61 QGAPSTQ 67
>gi|7228718|gb|AAF42593.1|AF226444_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
Length = 486
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 23/87 (26%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAKEDAPQAGSQG 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF 87
G ++ G + +
Sbjct: 61 QGAPSAQGGQDMAAVSEENTGNGGAAA 87
>gi|119774348|ref|YP_927088.1| decaheme cytochrome c MtrF [Shewanella amazonensis SB2B]
gi|119766848|gb|ABL99418.1| decaheme cytochrome c MtrF [Shewanella amazonensis SB2B]
Length = 639
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 24/90 (26%), Gaps = 5/90 (5%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L L+ + ++ CG + + K + +D F +
Sbjct: 14 RLPLAGATLLALTACGGSDGDSGKPGDPGGEPAMTIQSLHVEFMDV---GFTDGVASVKY 70
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
V+ D + IP L +
Sbjct: 71 RVTNQDDEVVVGIPSATFIA--AQLVPEGY 98
>gi|283834247|ref|ZP_06353988.1| YajG [Citrobacter youngae ATCC 29220]
gi|291069768|gb|EFE07877.1| YajG [Citrobacter youngae ATCC 29220]
Length = 192
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + M ++GC + D S++ A+ L
Sbjct: 1 MFKKILFPLVAMFMLAGCATPPTTIEVSPKITLPQQDPSLMGVTVSINGADQRQDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQLVTLTASRDLRF 78
>gi|19352391|ref|NP_598149.1| TrbH protein [uncultured bacterium]
gi|190571953|ref|YP_001967677.1| conjugal transfer protein TrbH [Comamonas testosteroni CNB-1]
gi|311109694|ref|YP_003982546.1| conjugal transfer protein TrbH family protein [Achromobacter
xylosoxidans A8]
gi|19070058|emb|CAD24374.1| TrbH protein [uncultured bacterium]
gi|119943691|gb|ABM06213.1| TrbH [Comamonas testosteroni CNB-1]
gi|310764383|gb|ADP19831.1| conjugal transfer protein TrbH family protein [Achromobacter
xylosoxidans A8]
Length = 153
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 7/80 (8%), Positives = 23/80 (28%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++++ + + + GC + V + D + + L + +L+
Sbjct: 1 MRKIIFAALFVLALGGCATTGQYGNFVPPTATVDQQQLAREAVQQLAVLYPPAKTRLELQ 60
Query: 62 GIVVSRIGDMITCYIPVHVS 81
G + +
Sbjct: 61 QATPDAFGQALVLTLRERGY 80
>gi|89896958|ref|YP_520445.1| hypothetical protein DSY4212 [Desulfitobacterium hafniense Y51]
gi|219667185|ref|YP_002457620.1| hypothetical protein Dhaf_1124 [Desulfitobacterium hafniense
DCB-2]
gi|89336406|dbj|BAE86001.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219537445|gb|ACL19184.1| hypothetical protein Dhaf_1124 [Desulfitobacterium hafniense
DCB-2]
Length = 211
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 7/46 (15%), Positives = 16/46 (34%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS 46
M K + + + ++GC + + + L K + G
Sbjct: 1 MFKRFLIILASVLLLAGCAAKTPQDQNADLDKPGQQVGTDLPVGDQ 46
>gi|295115214|emb|CBL36061.1| amino acid ABC transporter substrate-binding protein, PAAT family
(TC 3.A.1.3.-) [butyrate-producing bacterium SM4/1]
Length = 308
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 27/89 (30%), Gaps = 7/89 (7%)
Query: 1 MIKELG---LSMFIMTTISGCGLASR--EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M K++ + ++ +++ C ++ E + ++ T+ S A E
Sbjct: 1 MKKKVFSVMTAAALVFSLTACSTNAKTEEPETAAQSSASQTEAAGAETAESSGGASAEAG 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
+ GD T +
Sbjct: 61 EKAASG--ETKAAGDTFTVGFDQDFPPMG 87
>gi|307719208|ref|YP_003874740.1| hypothetical protein STHERM_c15270 [Spirochaeta thermophila DSM
6192]
gi|306532933|gb|ADN02467.1| hypothetical protein STHERM_c15270 [Spirochaeta thermophila DSM
6192]
Length = 189
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 14/41 (34%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF 43
+ L + + ++GC + S K+ + +
Sbjct: 6 RRLAFGLLVALVLAGCAVTSGAVKEGAQPSAAAGPSEAETD 46
>gi|56461637|ref|YP_156918.1| hypothetical protein IL2537 [Idiomarina loihiensis L2TR]
gi|56180647|gb|AAV83369.1| Uncharacterized conserved secreted protein [Idiomarina loihiensis
L2TR]
Length = 623
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 15/163 (9%), Positives = 51/163 (31%), Gaps = 18/163 (11%)
Query: 2 IKELGLSMFIMTTISGCG----LASREKKKVFLHKSNDTDIVNKRFGSSLDK-AEDEFQM 56
++ +++ ++ ++ CG S + + + T+ ++ L++ E++++
Sbjct: 1 MRYSIVALAVLGLLTACGQPQENNSGQNSQTAAEQPKQTEQSSQSETERLNQWFEEKYEE 60
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL--PMLQLIATILNKFPST----- 109
QLQ + I ++ +G + ++ + + L+ L
Sbjct: 61 QLQQSPIQMTFLGRK------DRYGDIDDMTVAAEKKQLEWLEGTVEELKANFDYDKLNL 114
Query: 110 VIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
+ D + + +F+
Sbjct: 115 EAQTSYDVWVYQYEQAKRNAEFRGMDYVFDQMRGAHTFLPQFL 157
>gi|327399434|ref|YP_004340303.1| outer membrane assembly lipoprotein YfiO [Hippea maritima DSM
10411]
gi|327182063|gb|AEA34244.1| outer membrane assembly lipoprotein YfiO [Hippea maritima DSM
10411]
Length = 251
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 36/118 (30%), Gaps = 6/118 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L ++GC + K + + + + D +E E + + +
Sbjct: 1 MKKTIALLGICAIALAGCSSHKKIIPKEEEKPAYEWYNEGIQDYINHDYSEAEHALTMIN 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
S T + E L + + + +P++ A+ +
Sbjct: 61 AQHPGSIYAKRATIALGDVYFAKGEYILARDYYR------KFIKLYPNSKEAVYAKYH 112
>gi|323963423|gb|EGB58985.1| hypothetical protein ERGG_00191 [Escherichia coli H489]
gi|323972287|gb|EGB67497.1| hypothetical protein ERHG_01722 [Escherichia coli TA007]
Length = 226
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 35 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGITVSINGADQRTDQALA- 93
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 94 ---KVTRDNQIVTLTASRDLRF 112
>gi|227550088|ref|ZP_03980137.1| metal ion ABC superfamily ATP binding cassette transporter, binding
protein [Enterococcus faecium TX1330]
gi|227180779|gb|EEI61751.1| metal ion ABC superfamily ATP binding cassette transporter, binding
protein [Enterococcus faecium TX1330]
Length = 292
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 56/178 (31%), Gaps = 38/178 (21%)
Query: 2 IKELGLSMFI---MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K++GL + + +T ++ CG S EK ++ T + + + +L
Sbjct: 22 MKKIGLVLLVLGCVTLLAACGSGSAEKTDKVKIGASPTPHA---------EILEHIKPEL 72
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ GI + + + L K L + A + P
Sbjct: 73 KKKGIELEIVK-------------FDDYVLPNKALENGDIDANYFSTVP---------YF 110
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-DTKVGRQNN 175
++ +N S A ++ I G I +N ++ GR N
Sbjct: 111 NLQKKENGYQFSNVGAIHLEPMGIYSHKIKKIAAIPDG---AKVIVSNVPSEWGRVLN 165
>gi|330998172|ref|ZP_08321998.1| hypothetical protein HMPREF9442_03107 [Paraprevotella xylaniphila
YIT 11841]
gi|329568864|gb|EGG50662.1| hypothetical protein HMPREF9442_03107 [Paraprevotella xylaniphila
YIT 11841]
Length = 284
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L + ++ C + +K + F + + V + L++ ++Q+
Sbjct: 1 MKKIFLCVMCAAALTACNNGANKKDQAFAEERDSLMQVINDKDTELNEIMGTVN-EIQEG 59
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI 102
++ IT S S+ + + + +A
Sbjct: 60 FRRINEAEGRITVNDGNMESETSKQAIRENMQYIQDAMAQN 100
>gi|312898382|ref|ZP_07757772.1| outer membrane protein [Megasphaera micronuciformis F0359]
gi|310620301|gb|EFQ03871.1| outer membrane protein [Megasphaera micronuciformis F0359]
Length = 139
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 35/116 (30%), Gaps = 4/116 (3%)
Query: 2 IKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
K+L L++ ++GCG A + + + + K E +L
Sbjct: 5 KKKLTALILTVLTAGILAGCGSADKVGVVDTQRVQKEAPLAKQYVEKHEQKV-QEINKKL 63
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + +S + L+++F L + K I +
Sbjct: 64 AEEKLSMSDEDFQKEQQKQKQELDIYSAGLQRQFKSDLDQKLAEIAKDKEVGIIVD 119
>gi|227485673|ref|ZP_03915989.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
gi|227236345|gb|EEI86360.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
Length = 217
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 40/126 (31%), Gaps = 18/126 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSN-------DTDIVNKRFGSSLDKAEDE 53
M ++ ++ + ++GCG K K + + + + K + +++ + E
Sbjct: 1 MKNKIIFALMLAGVLAGCGKKEEAKTKEDVAQEAISQAELPEGAKITKDTTTPIEEPKVE 60
Query: 54 FQ--------MQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILN 104
+ G + +++ F +++ +P L IA
Sbjct: 61 GEKPNTLGKFEAKDQDGKKFTNEDFKNYDATVINLWFTGCSACIDE--MPELNKIADDFK 118
Query: 105 KFPSTV 110
K
Sbjct: 119 KDKKVN 124
>gi|227534999|ref|ZP_03965048.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187390|gb|EEI67457.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 322
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 6/89 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + + T++GCG S K +S + + ++ LDK E
Sbjct: 34 MLKKMVIFGLLALTMAGCGSPSATDK----PESTSSVEIASKYYHQLDKKEQSMVFFTFK 89
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
S+ G + V ++ L+
Sbjct: 90 AVADDSQDGGKYIVDMKVR--NGTKSQLK 116
>gi|170077269|ref|YP_001733907.1| hypothetical protein SYNPCC7002_A0646 [Synechococcus sp. PCC 7002]
gi|169884938|gb|ACA98651.1| hypothetical protein SYNPCC7002_A0646 [Synechococcus sp. PCC 7002]
Length = 223
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 37/141 (26%), Gaps = 7/141 (4%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL-----QDTGIVVSRIGDMITCYIPV 78
E + L D G L Q T S+ + + +P
Sbjct: 61 EARTQQLEAELDLGQQQADLGDRLTNLTTLLAADPSTFDPQATPATTSQTPEPLKITLPS 120
Query: 79 HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIK 138
+ F ++ L +L IA L + I I +G ++
Sbjct: 121 NALFSADGQLAADAAEILGAIAIDLQQQERQTITI--RNYQVGEDATKATSLAQQQAQAV 178
Query: 139 SYLIQRGVSSNRFISVRGFAY 159
+ + + V G+
Sbjct: 179 QTYLAEALPGDYRWLVVGYGE 199
>gi|150389780|ref|YP_001319829.1| extracellular solute-binding protein [Alkaliphilus
metalliredigens QYMF]
gi|149949642|gb|ABR48170.1| extracellular solute-binding protein, family 5 [Alkaliphilus
metalliredigens QYMF]
Length = 521
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 18/49 (36%), Gaps = 5/49 (10%)
Query: 1 MIKELGLSMFIM-----TTISGCGLASREKKKVFLHKSNDTDIVNKRFG 44
M+K+ L++ I ++GC E + T+ + G
Sbjct: 1 MMKKTVLALLIAVVMGVLLLTGCSTKEVETPVQQDTAAESTETKHANVG 49
>gi|293572126|ref|ZP_06683134.1| D-methionine-binding lipoprotein MetQ [Enterococcus faecium E980]
gi|291607801|gb|EFF37115.1| D-methionine-binding lipoprotein MetQ [Enterococcus faecium E980]
Length = 271
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 56/178 (31%), Gaps = 38/178 (21%)
Query: 2 IKELGLSMFI---MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K++GL + + +T ++ CG S EK ++ T + + + +L
Sbjct: 1 MKKIGLVLLVLGCVTLLAACGSGSAEKTDKVKIGASPTPHA---------EILEHIKPEL 51
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ GI + + + L K L + A + P
Sbjct: 52 KKKGIELEIVK-------------FDDYVLPNKALENGDIDANYFSTVP---------YF 89
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN-DTKVGRQNN 175
++ +N S A ++ I G I +N ++ GR N
Sbjct: 90 NLQKKENGYQFSNVGAIHLEPMGIYSHKIKKIAAIPDG---AKVIVSNVPSEWGRVLN 144
>gi|329296779|ref|ZP_08254115.1| hypothetical protein Pstas_09800 [Plautia stali symbiont]
Length = 192
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + ++GC + + D S++ A+ L
Sbjct: 1 MLKKLLFPLLAAFILAGCASNNTTLNIQPKIQLPQQDPSLMGVTVSVNGADQRSDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G +IT + F
Sbjct: 60 ---KVNRDGQLITLTPSRDLRF 78
>gi|283954579|ref|ZP_06372098.1| membrane liproprotein MapA [Campylobacter jejuni subsp. jejuni 414]
gi|283793983|gb|EFC32733.1| membrane liproprotein MapA [Campylobacter jejuni subsp. jejuni 414]
Length = 187
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 18/164 (10%), Positives = 46/164 (28%), Gaps = 16/164 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + + +S C +V N S D E + + L
Sbjct: 1 MFKKILILIVPILFLSACATKQDTFAQVNQISKNSQCSSC----ESPDGFEAKIKGLLYI 56
Query: 61 TGIVVSRIGDMITCYIPV---HVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+ I + + T V V L+++ +L + + +
Sbjct: 57 SDIGIQCCANKRTLDTGVALKKVYLHRFYDLKEE-QKVLNA--------KGKKLFVDVNF 107
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+++ + + V+ + S + +
Sbjct: 108 NAVFYIYLKQELEDRGIVVLDNNDQNSPYVSKIDLEFTSYGATQ 151
>gi|302876037|ref|YP_003844670.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|307686755|ref|ZP_07629201.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|302578894|gb|ADL52906.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B]
Length = 234
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 65/211 (30%), Gaps = 39/211 (18%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++ L F + ++ L + +I E Q +
Sbjct: 24 IMTSTALVFFFILILALGYLTVFVEDTAEERADLYVNI------------ESALSQQQAN 71
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM---LQLIATILNKFPSTV-----IA 112
++ + + + L+++ + L + + L K + I
Sbjct: 72 PEVIDFDKSEGRIIIKTESFFDLGQFTLKEEGINTANMLNEVFSKLLKDKNIENAIQYIE 131
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRG----VSSNRFISVRGFAYKYPIDTNDT 168
+ HTD IG +N +S +RA + ++ + G + TN T
Sbjct: 132 VVGHTDYIGNTIDNRELSTQRAVSFLNAMMPMDSELENTYGYKFKASGMSEFE---TNAT 188
Query: 169 ------------KVGRQNNQRIEIQIFPRGN 187
+ + +++IE++I + +
Sbjct: 189 KQLRDRGQDQYNEEATEKDRKIEVRIIFKDD 219
>gi|332877981|ref|ZP_08445712.1| hypothetical protein HMPREF9074_01448 [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332684085|gb|EGJ56951.1| hypothetical protein HMPREF9074_01448 [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 313
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQD 60
+ ++ L+ + + C + +K + ++ + + + + +D +++ E Q L
Sbjct: 1 MNKIVLTAIVCGLLFACQQPTNKKVTEKVVETEEKHKLQLVYSNLVDTESQQEVQQALAA 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
G+ IGD + + + +V L + + + L ++ I
Sbjct: 61 AGVSTKNIGDFLESVALFNNTVGGKVGLVPQGYATIDSL---LPQYDEAAIQ 109
>gi|296100577|ref|YP_003610723.1| hypothetical protein ECL_00206 [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295055036|gb|ADF59774.1| hypothetical protein ECL_00206 [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 101
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 22/89 (24%), Gaps = 14/89 (15%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K +G S+F++ ++GC + + QL
Sbjct: 2 MMKRVG-SLFLLVVLAGCSTPQEAPAQKAQQGKMSPERSLNM-------------EQLCK 47
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
D + F L
Sbjct: 48 DQAAHRYNLDTQKIDVTGSERFQGSYELR 76
>gi|291520720|emb|CBK79013.1| nucleoside-binding protein [Coprococcus catus GD/7]
Length = 418
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 29/81 (35%), Gaps = 8/81 (9%)
Query: 1 MIKELGLSMFIMTT--ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K L L + ++ ++ CG + ++ + ++T + S+ + AE
Sbjct: 1 MKKFLALVLTVVMAASLAACGNSGTKETQAPASGDSETAAESTAAESTGETAEK------ 54
Query: 59 QDTGIVVSRIGDMITCYIPVH 79
G+ V + +
Sbjct: 55 VGEGVDVKDLKVGFIFIGDEN 75
>gi|194697014|gb|ACF82591.1| unknown [Zea mays]
gi|195639758|gb|ACG39347.1| Pi starvation-induced protein [Zea mays]
Length = 129
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 39/115 (33%), Gaps = 1/115 (0%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ + I+ ++ +A+ E +K + +T + D +EF ++
Sbjct: 1 MKKTSSPLLIVLFLTAAAMAA-EPEKQAAPAAQETAVHIVYVDRPEDADPEEFHIRTLTP 59
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + Y + + L + + L+ +L PS +
Sbjct: 60 VLGSEQKARDAVLYHYKNAASGFSAKLTPQQVKDLKEQPGVLQVVPSQTYQLHGP 114
>gi|148264657|ref|YP_001231363.1| peptidylprolyl isomerase, FKBP-type [Geobacter uraniireducens Rf4]
gi|146398157|gb|ABQ26790.1| peptidylprolyl isomerase, FKBP-type [Geobacter uraniireducens Rf4]
Length = 421
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 10/109 (9%), Positives = 30/109 (27%), Gaps = 4/109 (3%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K + + ++ ++GC + K + +S +KA ++
Sbjct: 16 KRSLVILAAVSALAGCA---GQPLKSAAVQETPPA-AGTNQAASPEKANAALDEAVKSGR 71
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
S + + + + +L+ + P +
Sbjct: 72 TTASIDLNETPGTVQKGDVVTVDYTVTDAAGKLLRTSRAAVANDPGQRL 120
>gi|121607598|ref|YP_995405.1| hypothetical protein Veis_0604 [Verminephrobacter eiseniae EF01-2]
gi|121552238|gb|ABM56387.1| conserved hypothetical protein [Verminephrobacter eiseniae EF01-2]
Length = 559
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 9/112 (8%), Positives = 33/112 (29%), Gaps = 7/112 (6%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L ++ ++GC S +K+ + + + A+ ++
Sbjct: 50 RLVWALAFSAAVAGCATQSYDKQTADMQNAGRAGGIPAALAQLESTAKTG-----EEKAA 104
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
++ + + ++ FL+ ++ P ++ +
Sbjct: 105 LLYNMERGELLRMERRYPDSTQAFLQADSK--VKEWEDTAKTNPDKLMGMLG 154
>gi|304438173|ref|ZP_07398115.1| methionine ABC superfamily ATP binding cassette transporter,
binding protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368780|gb|EFM22463.1| methionine ABC superfamily ATP binding cassette transporter,
binding protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 272
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 12/113 (10%), Positives = 38/113 (33%), Gaps = 7/113 (6%)
Query: 1 MIKELGLSMFI-MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L L + + ++GCG ++ K + + + + + + +L+
Sbjct: 1 MKKLLALVLAVTAFALAGCGGSA---DKPADNAKAEKVVKVGASPVPHAEILEAIRPELE 57
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
G+ + + + ++ ++ F + + + P +
Sbjct: 58 KEGVKLEIVEFNDYVQPNIA---TNDKEIDANFFQHEPYLKNFIEEHPELKLV 107
>gi|229129830|ref|ZP_04258796.1| Periplasmic binding protein [Bacillus cereus BDRD-Cer4]
gi|228653521|gb|EEL09393.1| Periplasmic binding protein [Bacillus cereus BDRD-Cer4]
Length = 291
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIASVLMAIILLMSIAGCSSPKKETAKQVKSESKERVVATTVAVTEIMDALEVDL 57
>gi|330904017|gb|EGH34589.1| flagellar motor protein MotB [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 88
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 27/76 (35%), Gaps = 3/76 (3%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVH--VSFVSEVFLEKKFLPMLQLIATILNKF 106
+ + Q +++ G I + + L+ F +L +A +
Sbjct: 3 EENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDILLALADTIKSV 62
Query: 107 PSTVIAIQSHTDSIGT 122
P+ ++I HTD+
Sbjct: 63 PN-KVSISGHTDATPF 77
>gi|257413836|ref|ZP_04744376.2| glycosyl hydrolase family 53 protein [Roseburia intestinalis L1-82]
gi|257202107|gb|EEV00392.1| glycosyl hydrolase family 53 protein [Roseburia intestinalis L1-82]
Length = 786
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 18/161 (11%), Positives = 47/161 (29%), Gaps = 18/161 (11%)
Query: 1 MIKELGLSMFIM--------TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK--A 50
M K++ + ++GCG ++ S T+ N+ + + +
Sbjct: 74 MKKQVYRKLLAACVSVSLGTVLLAGCGDSAGTTGTKTEDVSLTTEAQNEARTADVSEAQQ 133
Query: 51 EDEFQMQLQDTGIV---VSRIGDMITCYIPV-----HVSFVSEVFLEKKFLPMLQLIATI 102
E E Q ++Q+ + +G++ T +P + + F+ + A +
Sbjct: 134 ESETQTEVQENDTSEDVIEPVGEVTTFTLPDGPEESDIFVQPVADISDDFIRGMDASAVL 193
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQ 143
+ V + + +
Sbjct: 194 SVENSGAVYYGYDGKEQDVFETLAQSGVNYIRLRVWNDPYD 234
>gi|58616627|ref|YP_195836.1| conjugal transfer protein TrbH [Achromobacter xylosoxidans A8]
gi|58416225|emb|CAI47820.1| mating pair formation protein TrbH [Achromobacter xylosoxidans]
Length = 153
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 7/80 (8%), Positives = 23/80 (28%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++++ + + + GC + V + D + + L + +L+
Sbjct: 1 MRKIIFAALFVLALGGCATTGQYGNFVPPTATVDQQQLAREAWQQLAVLYPPAKTRLELQ 60
Query: 62 GIVVSRIGDMITCYIPVHVS 81
G + +
Sbjct: 61 QATPDAFGQALVLTLRERGY 80
>gi|30018591|ref|NP_830222.1| ferrichrome-binding protein [Bacillus cereus ATCC 14579]
gi|228937629|ref|ZP_04100266.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228970517|ref|ZP_04131168.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228977087|ref|ZP_04137489.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
Bt407]
gi|229042237|ref|ZP_04189990.1| Ferrichrome-binding periplasmic protein [Bacillus cereus AH676]
gi|229108008|ref|ZP_04237634.1| Ferrichrome-binding periplasmic protein [Bacillus cereus Rock1-15]
gi|229125835|ref|ZP_04254860.1| Ferrichrome-binding periplasmic protein [Bacillus cereus BDRD-Cer4]
gi|229143128|ref|ZP_04271560.1| Ferrichrome-binding periplasmic protein [Bacillus cereus BDRD-ST24]
gi|296501165|ref|YP_003662865.1| ferrichrome-binding protein [Bacillus thuringiensis BMB171]
gi|29894132|gb|AAP07423.1| Ferrichrome-binding protein [Bacillus cereus ATCC 14579]
gi|228640209|gb|EEK96607.1| Ferrichrome-binding periplasmic protein [Bacillus cereus BDRD-ST24]
gi|228657493|gb|EEL13306.1| Ferrichrome-binding periplasmic protein [Bacillus cereus BDRD-Cer4]
gi|228675408|gb|EEL30626.1| Ferrichrome-binding periplasmic protein [Bacillus cereus Rock1-15]
gi|228727096|gb|EEL78300.1| Ferrichrome-binding periplasmic protein [Bacillus cereus AH676]
gi|228782623|gb|EEM30799.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
Bt407]
gi|228789249|gb|EEM37177.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228822003|gb|EEM67994.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|296322217|gb|ADH05145.1| ferrichrome-binding protein [Bacillus thuringiensis BMB171]
gi|326938125|gb|AEA14021.1| ferrichrome-binding protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 306
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 38/103 (36%), Gaps = 10/103 (9%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L +S+ + +S C +S +KK ++T G ++ + +
Sbjct: 1 MKKLFISLTVLFVLVMSACSNSSTDKKNDAKGSKSETITYQSEDGKKVEVPANPKR---- 56
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIAT 101
+VV + V++ V +F L+ +A
Sbjct: 57 ---VVVLSSFAGNVMSLGVNLVGVDSWSKQNPRFDSKLKDVAE 96
>gi|282916752|ref|ZP_06324510.1| hypothetical protein SATG_00245 [Staphylococcus aureus subsp.
aureus D139]
gi|283770557|ref|ZP_06343449.1| lipoprotein [Staphylococcus aureus subsp. aureus H19]
gi|282319239|gb|EFB49591.1| hypothetical protein SATG_00245 [Staphylococcus aureus subsp.
aureus D139]
gi|283460704|gb|EFC07794.1| lipoprotein [Staphylococcus aureus subsp. aureus H19]
Length = 314
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 5/92 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ L + +SGC E KK ++ + FQ +
Sbjct: 1 MLKKAKLILIATLLLSGCSTIENESKKDRNTETKSVPEEMEASKY----VGQGFQPPAEK 56
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
I ++ F+ L+ K
Sbjct: 57 DAIEFAKK-HKDKIAKRGEQFFMDNFGLKVKA 87
>gi|259046740|ref|ZP_05737141.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175]
gi|259036636|gb|EEW37891.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175]
Length = 354
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 9/105 (8%), Positives = 28/105 (26%), Gaps = 17/105 (16%)
Query: 1 MIK----ELGLSMFIMTTISGCGLASREKKKVFLHKSND-----------TDIVNKRFGS 45
M K +L + + + ++GC S ++ + +
Sbjct: 1 MKKSFWSKLAIGLSSLALLAGCSSNSGSDTNQSQSQNASKTIETLKIAFVPSRDPETIVT 60
Query: 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV--SFVSEVFL 88
+ + ++ + +L G V + + +
Sbjct: 61 TTEPLKELLKKELAKEGYDVKNVDISVGTSFDAVGEALASGSADI 105
>gi|149910764|ref|ZP_01899399.1| hypothetical protein PE36_00260 [Moritella sp. PE36]
gi|149806204|gb|EDM66183.1| hypothetical protein PE36_00260 [Moritella sp. PE36]
Length = 136
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 23/87 (26%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L + + +SGC + + + I + ++ D
Sbjct: 1 MKKLIVVVIAAVALSGCAKTFKSNISEVTPVTGISSICIEDNIRVEIPLGTWIKIAANDN 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFL 88
G + R F L
Sbjct: 61 GYSIDREDCEAVVTYTALRYFDFHAPL 87
>gi|239980173|ref|ZP_04702697.1| hypothetical protein SalbJ_12080 [Streptomyces albus J1074]
gi|291452027|ref|ZP_06591417.1| predicted protein [Streptomyces albus J1074]
gi|291354976|gb|EFE81878.1| predicted protein [Streptomyces albus J1074]
Length = 203
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/162 (12%), Positives = 53/162 (32%), Gaps = 8/162 (4%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQMQLQDT 61
++ + + + ++GCGL ++ + + D + + E + +
Sbjct: 16 RQAAVVLLVSGLLAGCGLGEPDQTYQQAYDAMYPDAKAATEAALPGVEVEQLTRDTKECG 75
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL------NKFPSTVIAIQS 115
G+ +S D V V + + +++ + L + P + +
Sbjct: 76 GLDISADKDASKLSAYVTVGGEVDADDRRSLADLVRAVGARLVDQGWRAQIPDRSV-VGG 134
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ + S+E A++ G + R V GF
Sbjct: 135 ESPAPEGELALTENSEEAAEMSLRKADVHGWVNIRADVVEGF 176
>gi|261368831|ref|ZP_05981714.1| conserved hypothetical protein [Subdoligranulum variabile DSM
15176]
gi|282569098|gb|EFB74633.1| conserved hypothetical protein [Subdoligranulum variabile DSM
15176]
Length = 240
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 6/45 (13%), Positives = 15/45 (33%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS 46
+K+ + M + ++GC E +S + +
Sbjct: 1 MKKALVLMLSLIMLTGCATTRTEPTVTATPESAVAATPDTAASEA 45
>gi|167745898|ref|ZP_02418025.1| hypothetical protein ANACAC_00592 [Anaerostipes caccae DSM 14662]
gi|167654413|gb|EDR98542.1| hypothetical protein ANACAC_00592 [Anaerostipes caccae DSM 14662]
Length = 158
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 5/63 (7%), Positives = 17/63 (26%), Gaps = 3/63 (4%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M ++ + + ++GC +++ + + T +
Sbjct: 1 MKNKITAILACGAFVFLLAGCQSTPKDQAEATTTQDIATTAEGTENATEKSTETQATASD 60
Query: 58 LQD 60
D
Sbjct: 61 TPD 63
>gi|260889724|ref|ZP_05900987.1| D-methionine-binding o protein MetQ [Leptotrichia hofstadii
F0254]
gi|260860330|gb|EEX74830.1| D-methionine-binding o protein MetQ [Leptotrichia hofstadii
F0254]
Length = 127
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF--GSSLDKAEDEFQMQ 57
+K++ L + + CG + + K ++ + G L+ +D+ + +
Sbjct: 1 MKKILLVLVTALFLVACGNSDKSAKNSETKETQKLKVAATPVPAGEILNVVKDDLKKE 58
>gi|228910369|ref|ZP_04074185.1| Periplasmic binding protein [Bacillus thuringiensis IBL 200]
gi|228849321|gb|EEM94159.1| Periplasmic binding protein [Bacillus thuringiensis IBL 200]
Length = 291
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIVSVLMAIILLMSIAGCSSPKKETAKQVKSESKERVVATTVAVTEIMDALEVDL 57
>gi|229048252|ref|ZP_04193820.1| Periplasmic binding protein [Bacillus cereus AH676]
gi|229147105|ref|ZP_04275464.1| Periplasmic binding protein [Bacillus cereus BDRD-ST24]
gi|228636354|gb|EEK92825.1| Periplasmic binding protein [Bacillus cereus BDRD-ST24]
gi|228722977|gb|EEL74354.1| Periplasmic binding protein [Bacillus cereus AH676]
Length = 291
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIASVLMAIILLMSIAGCSSPKKETAKQVKSESKERVVATTVAVTEIMDALEVDL 57
>gi|30022622|ref|NP_834253.1| ferrichrome-binding protein [Bacillus cereus ATCC 14579]
gi|29898180|gb|AAP11454.1| Ferrichrome-binding protein [Bacillus cereus ATCC 14579]
Length = 291
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIASVLMAIILLMSIAGCSSPKKETAKQVKSESKERVVATTVAVTEIMDALEVDL 57
>gi|239637176|ref|ZP_04678168.1| bacterial extracellular solute-binding protein, family 5
[Staphylococcus warneri L37603]
gi|239597308|gb|EEQ79813.1| bacterial extracellular solute-binding protein, family 5
[Staphylococcus warneri L37603]
Length = 517
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Query: 1 MIKELGLSMFIM--TTISGCGLASREKKKVFL---HKSNDTDIVNKRFGSSLDKAED--- 52
M K + LS+ ++GC +++ + + ++ + + + +++
Sbjct: 1 MKKGILLSVVTTTTLLLAGCSSHTKDDHNINVSLPTEAKADKLDAQGYDAAMPVYSAVYD 60
Query: 53 EFQMQLQDTGI--------VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ GI V G ++ +V F L+ K + A +N
Sbjct: 61 SLVQYDKKKGIKAGLADRWKVDNSGKEYEFHLKENVKFSDGSKLDAKAVKFSIDRAKKMN 120
Query: 105 K 105
K
Sbjct: 121 K 121
>gi|227551567|ref|ZP_03981616.1| conserved hypothetical protein [Enterococcus faecium TX1330]
gi|227179244|gb|EEI60216.1| conserved hypothetical protein [Enterococcus faecium TX1330]
Length = 195
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 2/82 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN--KRFGSSLDKAEDEFQMQL 58
MIK+L L + ++GC + + T+ V G+ +D+A + + +
Sbjct: 1 MIKKLFLLSTLTLAMAGCSTTDSATESTTETTEDTTEEVKVETITGAEVDEARERWAEAI 60
Query: 59 QDTGIVVSRIGDMITCYIPVHV 80
G + T +
Sbjct: 61 ISIGTASEEGMEEATEKAEEVI 82
>gi|323140666|ref|ZP_08075588.1| hypothetical protein HMPREF9443_00346 [Phascolarctobacterium sp.
YIT 12067]
gi|322414851|gb|EFY05648.1| hypothetical protein HMPREF9443_00346 [Phascolarctobacterium sp.
YIT 12067]
Length = 244
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 63/179 (35%), Gaps = 42/179 (23%)
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHV--SFVSEVFLEKKF-----LPMLQLIATILN 104
+E +L + GI+V + + + + +++ T+LN
Sbjct: 60 NEIHKELNNRGIMVEINKTHDVLRLHDKALKFLPGRA--KPEAGEENVQQISEVLYTVLN 117
Query: 105 KFPSTV---------IAIQSHTDS-----IGTLKNNLLISQERADVIKSYL--------- 141
K I I+ HTDS +N ++S RA +
Sbjct: 118 KDRGDKPKYKELVETIFIEGHTDSDLPSFRSDYPDNWMLSTARAVRTWEMMSAFRPDGAT 177
Query: 142 ----IQRGVSSNRFISVRGFAYKYPIDTNDT-KVGRQNNQRIEIQ---IFPRGN--IKK 190
+ + S G+A I N+T K + N+RI+I+ + P+G+ IKK
Sbjct: 178 QTLGEIKNHNGFPIFSCSGYADTRRIVENETSKEEKSINRRIDIRFVMVPPKGDSSIKK 236
>gi|167760565|ref|ZP_02432692.1| hypothetical protein CLOSCI_02939 [Clostridium scindens ATCC
35704]
gi|167661786|gb|EDS05916.1| hypothetical protein CLOSCI_02939 [Clostridium scindens ATCC
35704]
Length = 383
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 26/79 (32%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + + +F++ ++GC + + +I ED L
Sbjct: 1 MKKAILVIVFLLLAMAGCSGKNTKDSPKEHADKKPVEIAKGYQDIYDKACEDGKLDDLAT 60
Query: 61 TGIVVSRIGDMITCYIPVH 79
+V R+G+ +
Sbjct: 61 IRQIVERLGEDGLVAVDAK 79
>gi|256822812|ref|YP_003146775.1| peptidyl-dipeptidase Dcp [Kangiella koreensis DSM 16069]
gi|256796351|gb|ACV27007.1| Peptidyl-dipeptidase Dcp [Kangiella koreensis DSM 16069]
Length = 735
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 1 MIKELGLSMFIMTTI--SGCGLASREKKKVFLHKSNDT-DIVNKRFGSSLDKAEDEFQMQ 57
M+K+L ++ +M+ + +GC S E+K + + + V+ G+
Sbjct: 1 MMKKLTVAAAVMSALIAAGCSNDSSEQKSPVESEKAQSIESVDGANGTDTKNDATASNPF 60
Query: 58 LQD 60
++
Sbjct: 61 FEE 63
>gi|228923289|ref|ZP_04086578.1| Periplasmic binding protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228836383|gb|EEM81735.1| Periplasmic binding protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 291
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIVSVLMAIILLMSIAGCSSPKKESAKQVKSESKERVVATTVAVTEIMDALEVDL 57
>gi|228903062|ref|ZP_04067200.1| Periplasmic binding protein [Bacillus thuringiensis IBL 4222]
gi|228981243|ref|ZP_04141543.1| Periplasmic binding protein [Bacillus thuringiensis Bt407]
gi|228778443|gb|EEM26710.1| Periplasmic binding protein [Bacillus thuringiensis Bt407]
gi|228856597|gb|EEN01119.1| Periplasmic binding protein [Bacillus thuringiensis IBL 4222]
Length = 291
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIVSVLMAIILLMSIAGCSSPKKETAKQVKSESKERVVATTVAVTEIMDALEVDL 57
>gi|116494994|ref|YP_806728.1| hypothetical protein LSEI_1511 [Lactobacillus casei ATCC 334]
gi|116105144|gb|ABJ70286.1| hypothetical protein LSEI_1511 [Lactobacillus casei ATCC 334]
Length = 289
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 6/89 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + + T++GCG S K +S + + ++ LDK E
Sbjct: 1 MLKKMVIFGLLALTMAGCGSPSATDK----PESTSSVEIASKYYHQLDKKEQSMVFFTFK 56
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
S+ G + V ++ L+
Sbjct: 57 AVADDSQDGGKYIVDMKVR--NGTKSQLK 83
>gi|7228670|gb|AAF42569.1|AF226420_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
Length = 488
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 23/87 (26%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAKEDAPQAGSQG 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF 87
G ++ G + +
Sbjct: 61 QGAPSAQGGQDMAAVSAENTGNGGAAT 87
>gi|329768172|ref|ZP_08259676.1| hypothetical protein HMPREF0428_01373 [Gemella haemolysans M341]
gi|328838047|gb|EGF87667.1| hypothetical protein HMPREF0428_01373 [Gemella haemolysans M341]
Length = 600
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 50/186 (26%), Gaps = 24/186 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K + +M + ++GC AS K T + N S + +
Sbjct: 6 MLKVVSSAMALTMLLAGCSSASNNSKGTKAAVEFKTAVDNGGNALSGQQLKVGIASADPL 65
Query: 61 TGI-----VVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATIL----NKFPSTV 110
TG+ + + + Y + L++ A ++
Sbjct: 66 TGMFNPVFYLQSTDNDVMKYTMAGAFPTDDANRLKQDDKE-----APVMFHVDRDKKEVT 120
Query: 111 IAIQ-SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTK 169
+ I S G I + + S+ + + G +
Sbjct: 121 LTIHKDLKWSNGEDVKADDIVATYELMGNPKYTENVRYSDEYEVIEGMKDYH-------- 172
Query: 170 VGRQNN 175
G+ N
Sbjct: 173 EGKAKN 178
>gi|319761801|ref|YP_004125738.1| extracellular solute-binding protein family 3 [Alicycliphilus
denitrificans BC]
gi|330826339|ref|YP_004389642.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans
K601]
gi|317116362|gb|ADU98850.1| extracellular solute-binding protein family 3 [Alicycliphilus
denitrificans BC]
gi|329311711|gb|AEB86126.1| ABC-type transporter, periplasmic subunit family 3
[Alicycliphilus denitrificans K601]
Length = 253
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 28/99 (28%), Gaps = 3/99 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + C R + G +D + Q++
Sbjct: 1 MQKKIAALALVGLAGAACAADLRVGLNPAYEPFESKTASGEIVGFDVD-IANALCEQIKR 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF--VSEVFLEKKFLPMLQ 97
+ V D I + +S + + + ++
Sbjct: 60 KCVFVESEWDSIIPGLQAKKFDVVISSMSITPERARVVD 98
>gi|149911668|ref|ZP_01900277.1| beta-N-acetylhexosaminidase [Moritella sp. PE36]
gi|149805249|gb|EDM65265.1| beta-N-acetylhexosaminidase [Moritella sp. PE36]
Length = 885
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Query: 2 IKELGLSMFIMTTISGCGLA--SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+ +++ + ++GC + + + + V L+ QL
Sbjct: 1 MKKTTIALGLSVALAGCSTTTSPVATTQSIVDAISTSVQVTYVVNQKLEGDTAATCKQLG 60
Query: 60 DT 61
Sbjct: 61 AE 62
>gi|110640694|ref|YP_668422.1| hypothetical protein ECP_0494 [Escherichia coli 536]
gi|110804463|ref|YP_687983.1| hypothetical protein SFV_0409 [Shigella flexneri 5 str. 8401]
gi|293408583|ref|ZP_06652422.1| conserved hypothetical protein [Escherichia coli B354]
gi|332281584|ref|ZP_08393997.1| conserved hypothetical protein [Shigella sp. D9]
gi|26106839|gb|AAN79024.1|AE016756_207 Hypothetical lipoprotein yajG precursor [Escherichia coli CFT073]
gi|1773118|gb|AAB40190.1| hypothetical 20.9 kd lipoprotein [Escherichia coli]
gi|73854486|gb|AAZ87193.1| putative polymerase/proteinase [Shigella sonnei Ss046]
gi|110342286|gb|ABG68523.1| putative lipoprotein [Escherichia coli 536]
gi|110614011|gb|ABF02678.1| putative polymerase/proteinase [Shigella flexneri 5 str. 8401]
gi|281177604|dbj|BAI53934.1| putative lipoprotein [Escherichia coli SE15]
gi|291471761|gb|EFF14244.1| conserved hypothetical protein [Escherichia coli B354]
gi|307552340|gb|ADN45115.1| hypothetical lipoprotein YajG precursor [Escherichia coli ABU
83972]
gi|323379721|gb|ADX51989.1| Uncharacterized lipoprotein [Escherichia coli KO11]
gi|332103936|gb|EGJ07282.1| conserved hypothetical protein [Shigella sp. D9]
Length = 226
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 35 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALA- 93
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 94 ---KVTRDNQIVTLTASRDLRF 112
>gi|241663763|ref|YP_002982123.1| superoxide dismutase copper/zinc binding [Ralstonia pickettii
12D]
gi|240865790|gb|ACS63451.1| superoxide dismutase copper/zinc binding [Ralstonia pickettii
12D]
Length = 183
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 6/39 (15%), Positives = 14/39 (35%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN 40
+K+L +++ + ++GC S K
Sbjct: 1 MKQLVIAVAAIGLMAGCASNSASTAKAANAGDGAMTASA 39
>gi|323447094|gb|EGB03049.1| hypothetical protein AURANDRAFT_68341 [Aureococcus anophagefferens]
Length = 652
Score = 38.5 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 39/129 (30%), Gaps = 23/129 (17%)
Query: 76 IPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDS-IGTLKNNLLISQE 132
+ V F ++ + L ++ +A +L + + +Q HT+S G + +
Sbjct: 522 LSEDVQFAGNATEIKPESLELIDQLAAVLTSHENVDGLVLQGHTNSKCGLDCDGTTVCAN 581
Query: 133 RADV------------------IKSYLIQRGVSSNRFISVRGF-AYKYPIDTNDTKVGRQ 173
+ I G + +D ++
Sbjct: 582 DTCQRTFGASGGAVAFSLSRAAAVKAALVARGVDAGRIDCEGMAGSRRCVDDTESADNY- 640
Query: 174 NNQRIEIQI 182
N+R+EI +
Sbjct: 641 LNRRVEIHL 649
>gi|320158138|ref|YP_004190516.1| membrane protein [Vibrio vulnificus MO6-24/O]
gi|319933450|gb|ADV88313.1| membrane protein [Vibrio vulnificus MO6-24/O]
Length = 204
Score = 38.5 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 45/151 (29%), Gaps = 2/151 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M L + ++ C + A+ ++
Sbjct: 1 MRLNLLACAVLPMLLTACAQMPDTTMTRHQIDDLRDSDKDGVINQRDICADTPLGTEVDS 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
G I + I + + + ILN+ + + T
Sbjct: 61 KGCTRWTIYQKV--DIKTVYFNFDDAHIRLDQSSEFDELLAILNQGTEAKVILVGDTSPE 118
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
G+ + N +++++R V+K LI+ G++ R
Sbjct: 119 GSNEYNQVLAKKRTSVLKEALIENGIAPERI 149
>gi|302669213|ref|YP_003832363.1| arabinogalactan endo-1,4-beta-galactosidase Agn53B [Butyrivibrio
proteoclasticus B316]
gi|302396877|gb|ADL35781.1| arabinogalactan endo-1,4-beta-galactosidase Agn53B [Butyrivibrio
proteoclasticus B316]
Length = 709
Score = 38.5 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 33/90 (36%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K +G+ M + T++GCG + + V ++ +I N + D + + D
Sbjct: 6 LKYIGVIMAAVVTMAGCGNTTSTEAPVVNESTDTDNIDNANANETTDSETVDNAKENSDE 65
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
S V+ ++ L +
Sbjct: 66 STEKSERAYAAPKEKVDSVTPQDDLDLTQD 95
>gi|300789806|ref|YP_003770097.1| lipoprotein [Amycolatopsis mediterranei U32]
gi|299799320|gb|ADJ49695.1| lipoprotein [Amycolatopsis mediterranei U32]
Length = 578
Score = 38.5 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 6/40 (15%), Positives = 12/40 (30%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF 43
+L LS+ ++GC E + +
Sbjct: 12 KLLLSVLCAVLLAGCANVPLESQPQVVSGERQGQNSGDVV 51
>gi|254427808|ref|ZP_05041515.1| Rare lipoprotein A-like double-psi beta-barrel [Alcanivorax sp.
DG881]
gi|196193977|gb|EDX88936.1| Rare lipoprotein A-like double-psi beta-barrel [Alcanivorax sp.
DG881]
Length = 310
Score = 38.5 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L ++ +S C A +N+ + R+ D A +E + +
Sbjct: 1 MKRLACAVITSAFLSACATAPGPAGDSETPAANNGAPGSDRYSIHQDTAPEE-RRDISQL 59
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVF 87
V + P S + +
Sbjct: 60 PEPVPKKEPRSRYGNPESYSVWGKTY 85
>gi|255281401|ref|ZP_05345956.1| flavodoxin [Bryantella formatexigens DSM 14469]
gi|255267889|gb|EET61094.1| flavodoxin [Bryantella formatexigens DSM 14469]
Length = 289
Score = 38.5 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 26/81 (32%), Gaps = 7/81 (8%)
Query: 1 MIK--ELGLSMF----IMTTISGCGLASREKKKVF-LHKSNDTDIVNKRFGSSLDKAEDE 53
M+K +L + ++GCG A+ + + +++ T+ G+ AE
Sbjct: 54 MMKAKKLFAVILTGITAAGLLAGCGSAAGSQTQSTSGTEASTTEEAQSTSGTETSTAEAA 113
Query: 54 FQMQLQDTGIVVSRIGDMITC 74
+ +
Sbjct: 114 QSTSDTEASTTEEAQSGKVLV 134
>gi|254426969|ref|ZP_05040676.1| peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein
[Alcanivorax sp. DG881]
gi|196193138|gb|EDX88097.1| peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein
[Alcanivorax sp. DG881]
Length = 240
Score = 38.5 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 13/114 (11%), Positives = 34/114 (29%), Gaps = 7/114 (6%)
Query: 2 IKELGLSMFIMTTISGCGL-----ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+K+LG+ + ++ CG + ++K + + + LD +
Sbjct: 1 MKKLGIVLAGTVLLAACGQENAEVKTDDQKASYALGFRSAEQMRSLENLDLDAMVAGLRD 60
Query: 57 QLQDTGIV--VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ G D + + + +E++ L+ L
Sbjct: 61 GFDEKGESRLGDEDLDQLIRDFQGRMMAAQQKKVEEEAGKNLEASEKFLADNAE 114
>gi|167751959|ref|ZP_02424086.1| hypothetical protein ALIPUT_00201 [Alistipes putredinis DSM 17216]
gi|167660200|gb|EDS04330.1| hypothetical protein ALIPUT_00201 [Alistipes putredinis DSM 17216]
Length = 707
Score = 38.5 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K L + +TT++G + KK + + + + + + + E +Q
Sbjct: 1 MMKHLLTIVLCLTTLTGLAQEEKIKKSEWWNGNPSYAVPIREVNVTARRPMKEIG--IQK 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
T + + + + I + ++F + +F+++ L +A
Sbjct: 59 TQLDTTILHENIALSMADILTFNTSIFVKQYGRATLSTVA 98
>gi|86139672|ref|ZP_01058239.1| hypothetical protein MED193_02175 [Roseobacter sp. MED193]
gi|85823563|gb|EAQ43771.1| hypothetical protein MED193_02175 [Roseobacter sp. MED193]
Length = 94
Score = 38.5 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 17/57 (29%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ + + +GC + N + V G D A +
Sbjct: 5 MLKQKMMVAVALFLTTGCAIQPTGPNDTADQTGNVPEAVVAMAGPDQDVATARLVPE 61
>gi|320546772|ref|ZP_08041083.1| hypothetical protein HMPREF0819_0489 [Streptococcus equinus ATCC
9812]
gi|320448651|gb|EFW89383.1| hypothetical protein HMPREF0819_0489 [Streptococcus equinus ATCC
9812]
Length = 264
Score = 38.5 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 44/109 (40%), Gaps = 9/109 (8%)
Query: 2 IKELGLSMFIMTT---ISGCGLASREKKKVFLHK---SNDTDIVNKRFGSSLDKAEDEFQ 55
+K++ L + ++ ++GCG S +K+ + ++ ++ R+ + DKA +
Sbjct: 1 MKKMFLVISLLFVSIIVAGCGTTSTKKEVKYYDNDFVTDLGKALDARWKYTDDKANADV- 59
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ + G + ++ + F L++ L + + L
Sbjct: 60 -VMTEEGYETATQTELDVIEKYQDLKFKD-SKLKEAALAYINELKNGLE 106
>gi|308185904|ref|YP_003930035.1| hypothetical protein Pvag_0373 [Pantoea vagans C9-1]
gi|308056414|gb|ADO08586.1| Uncharacterized lipoprotein yajG precursor [Pantoea vagans C9-1]
Length = 192
Score = 38.5 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASRE---KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+L + ++GC ++ + K+ L + + + + D+ +D+ +
Sbjct: 1 MLKKLLFPLLAAFILAGCATSNNTLTIQPKIQLPQQDPGLMGVTVSINGADQRKDQALAK 60
Query: 58 LQDTGIVVS----RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ G +V+ R + + + LQ++ L
Sbjct: 61 VNRDGQLVTLTPSRDLRFLLQEVLEKQMTARGYMIGPDGAVDLQIVVNNL 110
>gi|304395496|ref|ZP_07377379.1| Uncharacterized lipoprotein [Pantoea sp. aB]
gi|304356790|gb|EFM21154.1| Uncharacterized lipoprotein [Pantoea sp. aB]
Length = 192
Score = 38.5 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + ++GC ++ + D S++ A+ L
Sbjct: 1 MLKKLLFPLLAAFILAGCATSNNTLTIQPKIQLPQQDPGLMGVTVSINGADQRKDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G ++T + F
Sbjct: 60 ---KVNRDGQLVTLTPSRDLRF 78
>gi|262375267|ref|ZP_06068500.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262309521|gb|EEY90651.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 144
Score = 38.5 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 5/38 (13%), Positives = 13/38 (34%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV 39
+K+ L + +S C + + + S +
Sbjct: 1 MKKTMLFGLLALALSACTTTPQSETEAPKIGSANPASA 38
>gi|228967642|ref|ZP_04128664.1| Periplasmic binding protein [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228792078|gb|EEM39658.1| Periplasmic binding protein [Bacillus thuringiensis serovar sotto
str. T04001]
Length = 300
Score = 38.5 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIVSVLMAIILLMSIAGCSSPKKETAKQVKSESKERVVATTVAVTEIMDALEVDL 57
>gi|228987281|ref|ZP_04147402.1| hypothetical protein bthur0001_39530 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229157673|ref|ZP_04285748.1| hypothetical protein bcere0010_38540 [Bacillus cereus ATCC 4342]
gi|228625630|gb|EEK82382.1| hypothetical protein bcere0010_38540 [Bacillus cereus ATCC 4342]
gi|228772510|gb|EEM20955.1| hypothetical protein bthur0001_39530 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 252
Score = 38.5 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+L +++F M ++GC E KK ++ + + + E L
Sbjct: 6 MMKKLIVTLFIAMLALAGCNTNKEEPKKEQKLEAV--KVAVQTNPKEIKPGEKTEVQALV 63
Query: 60 DTGIVVSRIGDMITCYI 76
G D + I
Sbjct: 64 TQGKEKVTDADDVKFEI 80
>gi|212695801|ref|ZP_03303929.1| hypothetical protein ANHYDRO_00334 [Anaerococcus hydrogenalis DSM
7454]
gi|212677234|gb|EEB36841.1| hypothetical protein ANHYDRO_00334 [Anaerococcus hydrogenalis DSM
7454]
Length = 236
Score = 38.5 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLH 31
MIK++ + + ++ ++GCG +S+
Sbjct: 14 MIKKIFIGLSLLIFLTGCGKSSKRSDDSVEI 44
>gi|268612015|ref|ZP_06145742.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Ruminococcus flavefaciens FD-1]
Length = 228
Score = 38.5 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 8/45 (17%), Positives = 19/45 (42%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS 45
M K + ++ M ++GCG ++ + +T +V +
Sbjct: 1 MKKSIAVAFAAMMLLTGCGQKVVIDEEPAPPSAQETAVVTMGEPA 45
>gi|229192745|ref|ZP_04319704.1| Periplasmic binding protein [Bacillus cereus ATCC 10876]
gi|228590835|gb|EEK48695.1| Periplasmic binding protein [Bacillus cereus ATCC 10876]
Length = 291
Score = 38.5 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIASVLMAIILLMSIAGCSSPKKESAKQVKSESKERVVATTVAVTEIMDALEVDL 57
>gi|58013355|gb|AAW63032.1| VcgC [Vibrio vulnificus]
Length = 164
Score = 38.5 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHK--SNDTDIVNKRFGSSLDK--AEDEFQM 56
M K++ ++ F+ + GC S++ + + + K A+ +
Sbjct: 1 MYKKIAIAAFVSVALMGCQTTSKQTQTGTESGYSEIANAALMGAVQTWSQKGAADSDLVS 60
Query: 57 QLQDT 61
+Q++
Sbjct: 61 AIQNS 65
>gi|253584201|ref|ZP_04861399.1| dipeptide-binding protein [Fusobacterium varium ATCC 27725]
gi|251834773|gb|EES63336.1| dipeptide-binding protein [Fusobacterium varium ATCC 27725]
Length = 508
Score = 38.5 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 5/77 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-----SLDKAEDEFQ 55
M K+L + + I GC EKK + + S +
Sbjct: 1 MKKKLITILSMALLIFGCSSKDGEKKSDAPKEKVVVVSQGSKPKSLDPYMYNEIPALAVT 60
Query: 56 MQLQDTGIVVSRIGDMI 72
Q+ +T + V G+++
Sbjct: 61 EQIFNTLLRVDEKGNVV 77
>gi|269966658|ref|ZP_06180737.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269828725|gb|EEZ82980.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 236
Score = 38.5 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 35/168 (20%), Gaps = 23/168 (13%)
Query: 1 MIKELGLSMFIM--TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + +F + T+ GC + + + S +D L
Sbjct: 1 MNKRILNGLFFVGSFTLVGCTATDSMPTETKQPAPKVNSVSAEVISSWID------SKVL 54
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G+ + + L A +
Sbjct: 55 APEGLSLEQDNLR---------YLSGSADLNSDGK------AEHIVLLQDRYFCGSGGCS 99
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ +I++ L + + V + N
Sbjct: 100 AYMFDNEGNVINRMSVTRTPIVLADSYSNGWQDFIVWSNGSYRLMSYN 147
>gi|229180864|ref|ZP_04308200.1| Periplasmic binding protein [Bacillus cereus 172560W]
gi|228602627|gb|EEK60112.1| Periplasmic binding protein [Bacillus cereus 172560W]
Length = 291
Score = 38.5 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIASVLMAIILLMSIAGCSSPKKESAKQVKSESKERVVATTVAVTEIMDALEVDL 57
>gi|225388398|ref|ZP_03758122.1| hypothetical protein CLOSTASPAR_02134 [Clostridium asparagiforme
DSM 15981]
gi|225045552|gb|EEG55798.1| hypothetical protein CLOSTASPAR_02134 [Clostridium asparagiforme
DSM 15981]
Length = 578
Score = 38.5 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 16/157 (10%), Positives = 39/157 (24%), Gaps = 27/157 (17%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG-------------- 44
M K ++ L+ + T++ CG + + +
Sbjct: 1 MRKLYKMLLACAVAGTLTACGTQTGAPQGAADPTEAAGETGGAEAEKASEGDGAITLYLV 60
Query: 45 -------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPML 96
++ D+ + L + G D + + L ++ L
Sbjct: 61 RHGKTFLNTTDQVQGWIDSPLTEKG---ESQADAVGRGMKDIRFVSAFSSDLGRQRETAL 117
Query: 97 QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+++A P I G + +
Sbjct: 118 RILAQNAGPAPELREVIGLREWFYGGYEGKMNAEMWD 154
>gi|91225424|ref|ZP_01260546.1| hypothetical protein V12G01_08855 [Vibrio alginolyticus 12G01]
gi|91189787|gb|EAS76060.1| hypothetical protein V12G01_08855 [Vibrio alginolyticus 12G01]
Length = 236
Score = 38.5 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 35/168 (20%), Gaps = 23/168 (13%)
Query: 1 MIKELGLSMFIM--TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + +F + T+ GC + + + S +D L
Sbjct: 1 MNKRILNGLFFVGSFTLVGCTATDSMPTETKQPAPKVNSVSAEVISSWID------SKVL 54
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
G+ + + L A +
Sbjct: 55 APEGLSLEQDNLR---------YLSGSADLNSDGK------AEHIVLLQDRYFCGSGGCS 99
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTN 166
+ +I++ L + + V + N
Sbjct: 100 AYMFDNEGNVINRMSVTRTPIVLADSYSNGWQDFIVWSNGSYRLMSYN 147
>gi|291298897|ref|YP_003510175.1| LysR family transcriptional regulator [Stackebrandtia nassauensis
DSM 44728]
gi|290568117|gb|ADD41082.1| transcriptional regulator, LysR family [Stackebrandtia nassauensis
DSM 44728]
Length = 458
Score = 38.5 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 14/131 (10%), Positives = 36/131 (27%), Gaps = 8/131 (6%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ-- 57
+K + LS + ++ CG + + K +++ E E + +
Sbjct: 311 MKSTRITLSTLGVLALAACGTGTADNGDGA---DKPGPEDLKGHTFAIESVEGETRGEKL 367
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
++D+ + + D V + + +A L T +
Sbjct: 368 MKDSKLTIKFTDDGEIKLDTDCNQRFGSVEISGDTIKT-DKLAGTLMGCEETRTEQEDWA 426
Query: 118 DSIGTLKNNLL 128
+
Sbjct: 427 SEFVESEPEWK 437
>gi|324120500|dbj|BAJ78639.1| hypothetical protein [Staphylococcus epidermidis]
Length = 227
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 45/183 (24%), Gaps = 16/183 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + M +S C S K+ T+ + + +
Sbjct: 1 MKKLSVILMTSALLLSACSHQSESHNDKNESKTAHTNQAQSNDNNQKKHRKVVKDGRTYA 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
GI++ +P + K L+ + K + I +
Sbjct: 61 DGILIVNKN----IDLPSSYNPGEN----PKAQKALKQLFDDAQKDDIHLYKISGYRSYP 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRF----ISVRGFAYKYPIDT--NDTKVGR-- 172
+K ++ R S V G + T T+ GR
Sbjct: 113 TQVKLYNNYAKRDGKKAADKYSARPGYSEHQTGLTFDVGGVDSDKNLYTSFGKTEEGRWI 172
Query: 173 QNN 175
N
Sbjct: 173 AKN 175
>gi|317406702|gb|EFV86865.1| efflux system outer membrane component [Achromobacter
xylosoxidans C54]
Length = 495
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS 46
M K+ LS F+ ++GC LA K+ N D ++G+
Sbjct: 5 MFKQTALSAFVAVALAGCSLAPDYKRPDAPVSGNWPDQPKVQYGAY 50
>gi|302384772|ref|YP_003820594.1| metallophosphoesterase [Clostridium saccharolyticum WM1]
gi|302195400|gb|ADL02971.1| metallophosphoesterase [Clostridium saccharolyticum WM1]
Length = 475
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 19/191 (9%), Positives = 51/191 (26%), Gaps = 24/191 (12%)
Query: 1 MIKELGLSMFIMTT--ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M + L+ + ++GC + ++ + + +
Sbjct: 1 MRNRIVLAALLAVVCMLAGCSFKGTVPESTSAESASPQETETTNAEPPTIEEVPQTSESP 60
Query: 59 QDTGIVVS-RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ----LIATIL---------- 103
S + G I +H +K F + + +
Sbjct: 61 AQEPAEESFKDGCKILVATDIHYLARDLTDFQKGFQYSIDHGDGKVMQYIWEITDAFVEE 120
Query: 104 --NKFPSTVIAIQSHTDSIGTLKNNLLISQERADV----IKSYLIQRGVSSNRFISVRGF 157
+ P VI + G +++ +++ ++ I +I N ++ +
Sbjct: 121 VKAEHPDLVI-LSGDLTYNGEKESHKNFAEKLGEIEDAGIPVIVIPGNHDINNPLAAQFV 179
Query: 158 AYKYPIDTNDT 168
+ N T
Sbjct: 180 GDTFLGAENIT 190
>gi|291536863|emb|CBL09975.1| Flavodoxins [Roseburia intestinalis M50/1]
Length = 237
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 7/91 (7%), Positives = 29/91 (31%), Gaps = 12/91 (13%)
Query: 2 IKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K++ LS+ ++ +++ C + + + + +
Sbjct: 1 MKKITALILSVVLVFSLAACSNTQQNDASDSVSSEAPSQVAESTPAEGT---------ET 51
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
+ + I+++ + V S ++
Sbjct: 52 EGSNILIAYFTYGENAELSDDVDASSSASIQ 82
>gi|126665879|ref|ZP_01736860.1| hypothetical protein MELB17_04902 [Marinobacter sp. ELB17]
gi|126629813|gb|EBA00430.1| hypothetical protein MELB17_04902 [Marinobacter sp. ELB17]
Length = 149
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L L ++ +T+++GC + + + T V + + DK F +
Sbjct: 1 MKKTLMLGAVLAVTSLAGCSIMPETISRDPEKGTVSTAGVGEAIYTY-DKKGKVFVDYMN 59
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+ + S +S+ L+ + + A
Sbjct: 60 G-----KSTNQTDSVKQEIIYSGLSKGELKITYREYMNDYAR 96
>gi|111038062|ref|YP_709149.1| conjugal transfer protein TrbH [IncP-1 plasmid pKJK5]
gi|110781067|emb|CAK02651.1| TrbH protein [IncP-1 plasmid pKJK5]
Length = 151
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 6/80 (7%), Positives = 24/80 (30%), Gaps = 2/80 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++++ ++ T++GC + F+ + + + L + + +
Sbjct: 1 MRKIIIAALFALTLAGCATTG--QYGNFVPAAANQQQIATDAVQQLATLYPPAKTRFELH 58
Query: 62 GIVVSRIGDMITCYIPVHVS 81
G + +
Sbjct: 59 QATPDAFGLALVNTLRERGY 78
>gi|326423756|ref|NP_759716.2| hypothetical protein VV1_0734 [Vibrio vulnificus CMCP6]
gi|319999118|gb|AAO09243.2| hypothetical protein VV1_0734 [Vibrio vulnificus CMCP6]
Length = 157
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHK--SNDTDIVNKRFGSSLDK--AEDEFQM 56
M K++ ++ F+ + GC S++ + + + K A+ +
Sbjct: 1 MYKKIAIAAFVSVALMGCQTTSKQTQTGTESGYSEIANAALMGAVQTWSQKGAADSDLVS 60
Query: 57 QLQDT 61
+Q++
Sbjct: 61 AIQNS 65
>gi|317056268|ref|YP_004104735.1| endo-1,4-beta-xylanase [Ruminococcus albus 7]
gi|315448537|gb|ADU22101.1| Endo-1,4-beta-xylanase [Ruminococcus albus 7]
Length = 391
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKV 28
M K++ L M +SGC A+ + KK
Sbjct: 1 MKKQILLIMCAALMLSGCASAADKDKKT 28
>gi|330504818|ref|YP_004381687.1| hypothetical protein MDS_3904 [Pseudomonas mendocina NK-01]
gi|328919104|gb|AEB59935.1| hypothetical protein MDS_3904 [Pseudomonas mendocina NK-01]
Length = 960
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 6/46 (13%), Positives = 13/46 (28%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ LE L +A L + P+ + ++
Sbjct: 772 VDLSTVPFNAGSAELEGDARQALDTLAKALEERPNLRLEVEGQAAQ 817
>gi|323484718|ref|ZP_08090077.1| hypothetical protein HMPREF9474_01828 [Clostridium symbiosum
WAL-14163]
gi|323401955|gb|EGA94294.1| hypothetical protein HMPREF9474_01828 [Clostridium symbiosum
WAL-14163]
Length = 567
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 6/85 (7%)
Query: 1 MIKELGLSMFIMTT----ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K++ L + + +SGCG S + T+ + +A D
Sbjct: 1 MKKKVSLLLALGLVCTTVLSGCGGGST-PTEPQTIADATTEAAGSEASTEGTEAADTLAD 59
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVS 81
+Q+ V++ + I + +
Sbjct: 60 -VQEMTFVLNNEPNSIDPTVTSNSF 83
>gi|308067122|ref|YP_003868727.1| sugar ABC transporter periplasmic protein [Paenibacillus polymyxa
E681]
gi|305856401|gb|ADM68189.1| ABC-type sugar transport system, periplasmic component
[Paenibacillus polymyxa E681]
Length = 417
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 25/71 (35%), Gaps = 5/71 (7%)
Query: 1 MIKE---LGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M+K + L+ + + + GC K K+ T G L + +F+
Sbjct: 1 MMKRTLGIILASTLLLGGALVGCSSKDDSSGKDANGKTTITLWGMGAEGKLLPEIVKDFE 60
Query: 56 MQLQDTGIVVS 66
+ D + V
Sbjct: 61 KENPDIHVDVQ 71
>gi|251797009|ref|YP_003011740.1| basic membrane lipoprotein [Paenibacillus sp. JDR-2]
gi|247544635|gb|ACT01654.1| basic membrane lipoprotein [Paenibacillus sp. JDR-2]
Length = 368
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 10/123 (8%), Positives = 30/123 (24%), Gaps = 14/123 (11%)
Query: 2 IKELGLSMFIMT--TISGCGLASREKKKVFLHKSND------------TDIVNKRFGSSL 47
+K+L + ++GC ++ ++ + +
Sbjct: 1 MKKLIMVAAAALLVFMAGCSKETKTNSTGAEAVTDGDKTKPRVAFVYLGVPGDGGWTYEH 60
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D+ + +L T V + + + + + + K P
Sbjct: 61 DQGRKMMEEELGLTATTVENVPEGADAERVFEELAEKNDIIFGTSFGYMDAMVAVAKKHP 120
Query: 108 STV 110
Sbjct: 121 DVK 123
>gi|117622694|ref|YP_851607.1| hypothetical protein APECO1_1577 [Escherichia coli APEC O1]
gi|237707572|ref|ZP_04538053.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|91071078|gb|ABE05959.1| hypothetical lipoprotein YajG precursor [Escherichia coli UTI89]
gi|115511818|gb|ABI99892.1| conserved hypothetical lipoprotein YajG precursor [Escherichia coli
APEC O1]
gi|226898782|gb|EEH85041.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|323952954|gb|EGB48822.1| hypothetical protein ERKG_00727 [Escherichia coli H252]
gi|323958627|gb|EGB54330.1| hypothetical protein ERLG_00209 [Escherichia coli H263]
Length = 226
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 35 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALA- 93
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 94 ---KVTRDNQIVTLTASRDLRF 112
>gi|229847021|ref|ZP_04467127.1| conserved putative lipoprotein [Haemophilus influenzae 7P49H1]
gi|229810105|gb|EEP45825.1| conserved putative lipoprotein [Haemophilus influenzae 7P49H1]
Length = 209
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQD 60
+K++ L+ F + +SGC + + ++ + + D+ + Q
Sbjct: 1 MKKILLTTFALVVLSGCAHKQQTADEQQALENPNIQQGQHQVLQPEDRIVRPDIYTDYQP 60
Query: 61 TGIVVSRIGDMITCYIP 77
V R G
Sbjct: 61 ERTEVLREGRYTLINFS 77
>gi|148985880|ref|ZP_01818974.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP3-BS71]
gi|147922026|gb|EDK73150.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Streptococcus pneumoniae SP3-BS71]
gi|301799786|emb|CBW32355.1| putative cyclophilin type peptidyl-prolyl cis-trans isomerase
[Streptococcus pneumoniae OXC141]
Length = 267
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + ++GC R + S+ + + + ++ E L +
Sbjct: 1 MKKLATLLLLSTVALAGCSNVQRSLRGDDYVDSSLAAEESSKVAA---QSAKELNDALTN 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ + + S+ + K P L +A
Sbjct: 58 ENANFPQLSKEVAEDEAEVILNTSQGDIRIKLFPKLAPLA 97
>gi|145639538|ref|ZP_01795142.1| conserved putative lipoprotein [Haemophilus influenzae PittII]
gi|145271329|gb|EDK11242.1| conserved putative lipoprotein [Haemophilus influenzae PittII]
Length = 209
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQD 60
+K++ L+ F + +SGC + + ++ + + D+ + Q
Sbjct: 1 MKKILLTTFALVVLSGCAHKQQTADEQQALENPNIQQGQHQVLQPEDRIVRPDIYTDYQP 60
Query: 61 TGIVVSRIGDMITCYIP 77
V R G
Sbjct: 61 ERTEVLREGRYTLINFS 77
>gi|209947546|ref|YP_002291043.1| putative lipoprotein precursor [Haemophilus influenzae]
gi|51507288|emb|CAF29039.1| putative lipoprotein precursor [Haemophilus influenzae]
gi|301168696|emb|CBW28287.1| conserved putative lipoprotein [Haemophilus influenzae 10810]
Length = 209
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQD 60
+K++ L+ F + +SGC + + ++ + + D+ + Q
Sbjct: 1 MKKILLTTFALVVLSGCAHKQQTADEQQALENPNIQQGQHQVLQPEDRIVRPDIYTDYQP 60
Query: 61 TGIVVSRIGDMITCYIP 77
V R G
Sbjct: 61 ERTEVLREGRYTLINFS 77
>gi|48243602|gb|AAT40760.1| hypothetical protein [Haemophilus influenzae]
Length = 156
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQD 60
+K++ L+ F + +SGC + + ++ + + D+ + Q
Sbjct: 1 MKKILLTTFALVVLSGCAHKQQTADEQQALENPNIQQGQHQVLQPEDRIVRPDIYTDYQP 60
Query: 61 TGIVVSRIGDMITCYIP 77
V R G
Sbjct: 61 ERTEVLREGRYTLINFS 77
>gi|331266827|ref|YP_004326457.1| vanY superfamily, D-alanyl-D-alanine carboxypeptidase
[Streptococcus oralis Uo5]
gi|326683499|emb|CBZ01117.1| vanY superfamily, D-alanyl-D-alanine carboxypeptidase
[Streptococcus oralis Uo5]
Length = 238
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 11/107 (10%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + LS + T++ C + ++ + S ++ + ++ +
Sbjct: 1 MKKRYVILSGILALTLAACSQEKPKNEENTQKTEQTSQPEGTVGSKSQASSQKKAEVVNK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
V D I + L + +
Sbjct: 61 GNYYSVQGKYDEIVIANKHYPLSKDYNPGENPTAKAELLKLIAAMQA 107
>gi|302669695|ref|YP_003829655.1| thiamin biosynthesis lipoprotein ApbE [Butyrivibrio proteoclasticus
B316]
gi|302394168|gb|ADL33073.1| thiamin biosynthesis lipoprotein ApbE [Butyrivibrio proteoclasticus
B316]
Length = 382
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 37/113 (32%), Gaps = 8/113 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI---VNKRFGSSLDKAEDEFQMQ 57
M K L + + GCG S + L +D + K +S A D
Sbjct: 9 MKKSLMAVILCTAILCGCGNVSGGAQNAGLDGKSDGAVSSFAGKNMQTSTLFAMDTVMEL 68
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSE----VFLEKKFLPML-QLIATILNK 105
+ R G+ + + +S E L K L + +A ++ K
Sbjct: 69 QIQGDEELLREGEALIRSLEKELSVTDENSEIARLNKDGKAALTEDVAELMGK 121
>gi|238924216|ref|YP_002937732.1| hypothetical protein EUBREC_1854 [Eubacterium rectale ATCC 33656]
gi|238875891|gb|ACR75598.1| Hypothetical protein EUBREC_1854 [Eubacterium rectale ATCC 33656]
Length = 124
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 5/64 (7%)
Query: 1 MIKELGL----SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K+L +M +GCG + ++ K +S K G + E E
Sbjct: 1 MKKKLITIVIGAMLCAGLFAGCGQSDTKQDKAAGTESAK-QAETKDEGDKGSQEEKELTG 59
Query: 57 QLQD 60
+ D
Sbjct: 60 TIDD 63
>gi|228919703|ref|ZP_04083065.1| hypothetical protein bthur0011_7270 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228840057|gb|EEM85336.1| hypothetical protein bthur0011_7270 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 218
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 3/109 (2%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDI-VNKRFGSSLDKAEDEFQMQ 57
M + L++ M +S C + + K+K + D I V + SS K E + +
Sbjct: 7 MKNYILYPLTLLTMLFLSACSNSVQPKEKNDVQSIKDVVIKVPENIFSSSKKNETISEDE 66
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ + I S S+ + + LQ + + +
Sbjct: 67 MKQNIKSYLNYSGELDENIVPLSSTTSDENITESDREKLQKLIELAKQN 115
>gi|158339137|ref|YP_001520314.1| hypothetical protein AM1_6063 [Acaryochloris marina MBIC11017]
gi|158309378|gb|ABW30995.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 85
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 1 MIKE----LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M+K L L M + + + C A+RE ++ S D+A Q
Sbjct: 1 MMKLRLIPLFLMMVLASVLGACETANRE-IPAPPVNQGESPQGGAELNQSEDEASPSIQE 59
Query: 57 QLQDTGIVVSRIGDM 71
+ + + +S G
Sbjct: 60 ETPASDVPLSPDGGE 74
>gi|69244240|ref|ZP_00602708.1| hypothetical protein EfaeDRAFT_2317 [Enterococcus faecium DO]
gi|258614998|ref|ZP_05712768.1| hypothetical protein EfaeD_04753 [Enterococcus faecium DO]
gi|260558485|ref|ZP_05830681.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|68196426|gb|EAN10853.1| hypothetical protein EfaeDRAFT_2317 [Enterococcus faecium DO]
gi|260075659|gb|EEW63965.1| conserved hypothetical protein [Enterococcus faecium C68]
Length = 362
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 36/111 (32%), Gaps = 9/111 (8%)
Query: 2 IKELGLSMFI--MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
K+L + + + + +GC AS +K K ++ ++V S + + E + L
Sbjct: 7 KKKLVMGVMVGSIFVFAGCS-ASTDKSKTATSETKTAEVVK----SKMKQIEKNVEKILA 61
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVF--LEKKFLPMLQLIATILNKFPS 108
+ S + + + ++ I T +
Sbjct: 62 EKDKDTKLSEYKKFVTESSAYSKSDKTEKKITNTYTESIKKIKTNFKEQDD 112
>gi|256028383|ref|ZP_05442217.1| SpoIID-like protein [Fusobacterium sp. D11]
Length = 517
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 22/191 (11%), Positives = 52/191 (27%), Gaps = 17/191 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASR-EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K++ L + C + K + + + +
Sbjct: 1 MKKKISLIFLSALVLISCSSNKTVNRVKPVKPNGDYGHSLPSNIQRGTREKIKLENTVFK 60
Query: 60 DTGIVV--SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
G+ + + G+ I +PV+ + + +++ L F +
Sbjct: 61 KMGLPLPYNTFGEPIPYLVPVNDNHKESFSVFEEYNEN-----RALKYFKDLSVRGHGDN 115
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS-VRGFAYKYPIDTNDTKVGRQNNQ 176
K ++ S + + + ++ V G + PI T
Sbjct: 116 SPYWRWKTSIKKSDLYSKAANRLIAIYRNNPRNVLTLVNGEWQQVPIKNVGTVQ------ 169
Query: 177 RIEIQIFPRGN 187
+I + RG
Sbjct: 170 --DIIVAARGE 178
>gi|237740614|ref|ZP_04571095.1| dipeptide-binding protein [Fusobacterium sp. 2_1_31]
gi|229422631|gb|EEO37678.1| dipeptide-binding protein [Fusobacterium sp. 2_1_31]
Length = 503
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 43/135 (31%), Gaps = 26/135 (19%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD------------ 48
M K + + M + + GCG ++++KV + + +LD
Sbjct: 1 MKKIVYVLMLVALFLVGCG--EKQEEKVAATEDKIVTVAQGAKPKTLDPHMYNAIPELLV 58
Query: 49 --KAEDEFQMQLQDTGIVVS-------RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ + + +D IV + + + V F L ++ I
Sbjct: 59 SRQFYNTLFSREKDGTIVPELAESYEYKNDKELDIVLKKGVKFHDGSELTAD--DVIFSI 116
Query: 100 ATILNKFPSTVIAIQ 114
+ + P + ++
Sbjct: 117 -ERMKEKPGAGVMVE 130
>gi|311280669|ref|YP_003942900.1| hypothetical protein Entcl_3371 [Enterobacter cloacae SCF1]
gi|308749864|gb|ADO49616.1| Uncharacterized lipoprotein [Enterobacter cloacae SCF1]
Length = 192
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + + ++GC + D S++ A+ L
Sbjct: 1 MLKKILFPLVALFMLAGCATPPTTIEVSPKITLPQQDPSLMGVTVSINGADQRPDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQLVTLTASRDLRF 78
>gi|326790243|ref|YP_004308064.1| phosphate binding protein [Clostridium lentocellum DSM 5427]
gi|326541007|gb|ADZ82866.1| phosphate binding protein [Clostridium lentocellum DSM 5427]
Length = 275
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 14/102 (13%)
Query: 1 MIKELGLSMFIMT----TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K+L L + + ++GCG +S + KV + S +++ ++++
Sbjct: 1 MKKKLLLCIAGVMIGTMALTGCGSSSSKGPKVSIVGSTT-------VSEPMEQLAEKYKE 53
Query: 57 QLQDTGIVVSRIGDMITCYIPVHV---SFVSEVFLEKKFLPM 95
+ D I V G +S L ++ +
Sbjct: 54 TVPDANIEVQGNGSSAGIKAVADGTADMGMSSRELSEEEKRL 95
>gi|37678585|ref|NP_933194.1| hypothetical protein VV0401 [Vibrio vulnificus YJ016]
gi|37197325|dbj|BAC93165.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
gi|58013353|gb|AAW63031.1| VcgC [Vibrio vulnificus]
gi|58013359|gb|AAW63034.1| VcgC [Vibrio vulnificus]
Length = 164
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHK--SNDTDIVNKRFGSSLDK--AEDEFQM 56
M K++ ++ F+ + GC S++ + + + K A+ +
Sbjct: 1 MYKKIAIAAFVSVALMGCQTTSKQTQTGTESGYSEIANAALMGAVQTWSQKGAADSDLVS 60
Query: 57 QLQDT 61
+Q++
Sbjct: 61 AIQNS 65
>gi|315180950|gb|ADT87864.1| OmpA family protein [Vibrio furnissii NCTC 11218]
Length = 337
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 19/93 (20%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ V + L L I L P VI I DS
Sbjct: 213 LPVEPEEMRFEHVWASDDYVYNSYQLTPAVKAQLNTIIAALVTQPDHVIHITGGADSRMA 272
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ R + + I V
Sbjct: 273 YRRYNHQLALRRAQAAQSYLMQHGVKPGQIVVA 305
>gi|223982957|ref|ZP_03633168.1| hypothetical protein HOLDEFILI_00447 [Holdemania filiformis DSM
12042]
gi|223965065|gb|EEF69366.1| hypothetical protein HOLDEFILI_00447 [Holdemania filiformis DSM
12042]
Length = 572
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 19/66 (28%), Gaps = 3/66 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK---RFGSSLDKAEDEFQMQ 57
M K + L M +GC + D N+ G+ + +
Sbjct: 25 MKKWIALVCSCMLLFAGCSTKEEGTAGSGQTSTQDPVKTNELTVAVGAQFTTLDPALNSE 84
Query: 58 LQDTGI 63
L + +
Sbjct: 85 LINGYV 90
>gi|167031152|ref|YP_001666383.1| lipoprotein [Pseudomonas putida GB-1]
gi|166857640|gb|ABY96047.1| lipoprotein [Pseudomonas putida GB-1]
Length = 235
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 15/66 (22%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L ++ C A E+ + + L AED+ +
Sbjct: 7 RYLLVAAFSLFLAACSSAPVEQATAPAQADAWQQLQQNIASNELATAEDQLAALQAQSPD 66
Query: 64 VVSRIG 69
Sbjct: 67 DPRSEQ 72
>gi|119471621|ref|ZP_01614006.1| transcriptional regulator, MerR family protein [Alteromonadales
bacterium TW-7]
gi|119445400|gb|EAW26687.1| transcriptional regulator, MerR family protein [Alteromonadales
bacterium TW-7]
Length = 597
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 5/42 (11%), Positives = 19/42 (45%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR 42
M+K+ +++ +++ ++GC L + + + +
Sbjct: 1 MLKKSIIALSLLSMLTGCSLDGDDGQNGAQGAQGEQGTAGEN 42
>gi|322385277|ref|ZP_08058923.1| lipoprotein [Streptococcus cristatus ATCC 51100]
gi|321270700|gb|EFX53614.1| lipoprotein [Streptococcus cristatus ATCC 51100]
Length = 290
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 2 IKELGLSMFI-MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K+LG+ + ++GC + ++ + ++ +LDKA E++ +Q
Sbjct: 1 MKKLGIVLLSTAILLTGCAANQKSNTSASSSEAKTS--LSASDQKALDKATAEYKAFVQK 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFV 83
+ + +
Sbjct: 59 EIDQLLTDTEKFRDTLKEGKLDE 81
>gi|225854160|ref|YP_002735672.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae JJA]
gi|225723385|gb|ACO19238.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae JJA]
Length = 240
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 13/109 (11%), Positives = 33/109 (30%), Gaps = 6/109 (5%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + LS + T++ C + ++ + S +A + + ++
Sbjct: 1 MKKRYVILSGLLALTLAACSQEKTKVEENTQKTEQSSQPEGTV--GSKSQASSQKKAEVS 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVF---LEKKFLPMLQLIATILNK 105
+ G S G + +S+ + L + +
Sbjct: 59 NKGSYYSIQGKYDEIILANKRYPLSKDYNPGENPTAKAELLKLIAAMQA 107
>gi|225858463|ref|YP_002739973.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
70585]
gi|225721035|gb|ACO16889.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
70585]
Length = 238
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 13/109 (11%), Positives = 33/109 (30%), Gaps = 6/109 (5%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + LS + T++ C + ++ + S +A + + ++
Sbjct: 1 MKKRYVILSGLLALTLAACSQEKTKVEENTQKTEQSSQPEGTV--GSKSQASSQKKAEVS 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVF---LEKKFLPMLQLIATILNK 105
+ G S G + +S+ + L + +
Sbjct: 59 NKGSYYSIQGKYDEIILANKRYPLSKDYNPGENPTAKAELLKLIAAMQA 107
>gi|261377889|ref|ZP_05982462.1| competence lipoprotein ComL [Neisseria cinerea ATCC 14685]
gi|269145742|gb|EEZ72160.1| competence lipoprotein ComL [Neisseria cinerea ATCC 14685]
Length = 267
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 36/116 (31%), Gaps = 6/116 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD---IVNKRFGSSLDKAEDEFQMQL 58
+K++ L++ + +S C K + + + + +S + ++
Sbjct: 1 MKKILLTVSLGLALSACATKGTVDKDAQITQDWSVEKLYAEAQDELNSSNYTRAVKLYEI 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ SR E + K L + + + P+ A+
Sbjct: 61 LESRFPTSRHAQQSQLDTAYAYYKDDE---KDKALAAIDRFRRLHPQHPNMDYALY 113
>gi|149021590|ref|ZP_01835645.1| succinyl-diaminopimelate desuccinylase [Streptococcus pneumoniae
SP23-BS72]
gi|168492790|ref|ZP_02716933.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
CDC3059-06]
gi|221231452|ref|YP_002510604.1| carboxypeptidase [Streptococcus pneumoniae ATCC 700669]
gi|225860626|ref|YP_002742135.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230409|ref|ZP_06964090.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298255490|ref|ZP_06979076.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298502421|ref|YP_003724361.1| serine family D-Ala-D-Ala carboxypeptidase [Streptococcus
pneumoniae TCH8431/19A]
gi|147930286|gb|EDK81271.1| succinyl-diaminopimelate desuccinylase [Streptococcus pneumoniae
SP23-BS72]
gi|183576972|gb|EDT97500.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
CDC3059-06]
gi|220673912|emb|CAR68418.1| putative carboxypeptidase [Streptococcus pneumoniae ATCC 700669]
gi|225726551|gb|ACO22402.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
Taiwan19F-14]
gi|298238016|gb|ADI69147.1| serine family D-Ala-D-Ala carboxypeptidase [Streptococcus
pneumoniae TCH8431/19A]
gi|327390363|gb|EGE88704.1| D-alanyl-D-alanine carboxypeptidase family protein [Streptococcus
pneumoniae GA04375]
Length = 238
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 13/109 (11%), Positives = 33/109 (30%), Gaps = 6/109 (5%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + LS + T++ C + ++ + S +A + + ++
Sbjct: 1 MKKRYVILSGLLALTLAACSQEKTKVEENTQKTEQSSQPEGTV--GSKSQASSQKKAEVS 58
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVF---LEKKFLPMLQLIATILNK 105
+ G S G + +S+ + L + +
Sbjct: 59 NKGSYYSIQGKYDEIILANKRYPLSKDYNPGENPTAKAELLKLIAAMQA 107
>gi|125624683|ref|YP_001033166.1| phosphate transport substrate binding protein pstE [Lactococcus
lactis subsp. cremoris MG1363]
gi|124493491|emb|CAL98469.1| phosphate transport substrate binding protein pstE [Lactococcus
lactis subsp. cremoris MG1363]
gi|300071477|gb|ADJ60877.1| phosphate transport substrate binding protein pstE [Lactococcus
lactis subsp. cremoris NZ9000]
Length = 283
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 22/164 (13%), Positives = 55/164 (33%), Gaps = 22/164 (13%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM- 56
M K++ +++ + T++ CG +++ + +V S + + DE M
Sbjct: 1 MKKKIFIALMASVSLFTLAACGSGNKQVT--AGGSTALQPMVEHASMSYMKQNPDEIIMV 58
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
Q +G+ ++++ + + + + I +A+
Sbjct: 59 QGGGSGVGLAQVAAGSFQIGNSDIFAEEKSGI------AVDKIIDH-------KVAVIGF 105
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRG---VSSNRFISVRGF 157
I +SQ+ I + I ++ I+V G
Sbjct: 106 APIINKKLKVKNLSQQELIDIFTGKITNWKEVGGQDQKITVIGR 149
>gi|320157574|ref|YP_004189953.1| hypothetical protein VVM_04310 [Vibrio vulnificus MO6-24/O]
gi|58013357|gb|AAW63033.1| VcgC [Vibrio vulnificus]
gi|319932886|gb|ADV87750.1| hypothetical protein VVMO6_02728 [Vibrio vulnificus MO6-24/O]
Length = 164
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHK--SNDTDIVNKRFGSSLDK--AEDEFQM 56
M K++ ++ F+ + GC S++ + + + K A+ +
Sbjct: 1 MYKKIAIAAFVSVALMGCQTTSKQTQTGTESGYSEIANAALMGAVQTWSQKGAADSDLVS 60
Query: 57 QLQDT 61
+Q++
Sbjct: 61 AIQNS 65
>gi|258423142|ref|ZP_05686035.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|257846592|gb|EEV70613.1| conserved hypothetical protein [Staphylococcus aureus A9635]
Length = 304
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 25/92 (27%), Gaps = 9/92 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +SGC + E + + AE + +
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+++ + F+ L+ K
Sbjct: 61 HKDKIAKRSEQ---------FFMDNFGLKVKA 83
>gi|218673023|ref|ZP_03522692.1| hypothetical protein RetlG_16060 [Rhizobium etli GR56]
Length = 86
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 5/46 (10%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS 46
M+K++ L ++ ++ C ++ + ++ +S
Sbjct: 1 MMKKIVLVGALVGALASCTAT----EQGTAIGAGTGAVIGGAVTNS 42
>gi|254487666|ref|ZP_05100871.1| chemotaxis protein MotB [Roseobacter sp. GAI101]
gi|214044535|gb|EEB85173.1| chemotaxis protein MotB [Roseobacter sp. GAI101]
Length = 280
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 57/178 (32%), Gaps = 17/178 (9%)
Query: 20 LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT--------GIVVSRIGDM 71
+ E ++ + + + + + ++ ++ + +
Sbjct: 105 MTPVEGQESGDVGAGTNGPDEEGNAELFKVVDAQLMGRGGESMVMDNIARHVITRQTEEG 164
Query: 72 ITCYI---PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT---LKN 125
+ + F + + L L + +K + IA+ +H S
Sbjct: 165 MVIELFDVEDVPLFKNGGDQPTQMLRELLEVIVDASKIVTNKIAVAAHVRSNPIVAVENP 224
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
+S +R + L + GV R V GFA + P DT R N R+EI +
Sbjct: 225 VWDLSAKRGTQTRILLEKLGVKPARIERVTGFADRKPAAI-DTMDVR--NNRVEIILL 279
>gi|212697379|ref|ZP_03305507.1| hypothetical protein ANHYDRO_01949 [Anaerococcus hydrogenalis DSM
7454]
gi|212675571|gb|EEB35178.1| hypothetical protein ANHYDRO_01949 [Anaerococcus hydrogenalis DSM
7454]
Length = 325
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR--FGSSLDKAEDEFQMQ 57
M K++ L++ + ++ C L S+ K ++ G S D +
Sbjct: 1 MKKKIALALCLSLVLTSCSLKSKNNDKSNSNELKSQSNTQNNLIIGESKDNKSNNLSKS 59
>gi|291514434|emb|CBK63644.1| hypothetical protein AL1_11450 [Alistipes shahii WAL 8301]
Length = 493
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 22/87 (25%), Gaps = 3/87 (3%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L ++ C + G D A +
Sbjct: 1 MSKFYMRLLSVCLAALVLAACSSSEGGGDDGPTAGQIPDKAGMTVKGIVKDSAGNGIAGV 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVS 84
+ G+ V+ + Y+ ++ +
Sbjct: 61 VVSDGLEVTATDERGIYYLASDLARRN 87
>gi|161504378|ref|YP_001571490.1| hypothetical protein SARI_02489 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865725|gb|ABX22348.1| hypothetical protein SARI_02489 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 210
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC D S++ A+ L
Sbjct: 19 MLKKLLFPLVALIMLAGCATPPTTIDVAPKITLPQQDPSLMGVTVSINGADQRQDQALA- 77
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 78 ---KVTRNNQLVTLTASRDLRF 96
>gi|294142592|ref|YP_003558570.1| hypothetical protein SVI_3821 [Shewanella violacea DSS12]
gi|293329061|dbj|BAJ03792.1| hypothetical protein [Shewanella violacea DSS12]
Length = 205
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 44/148 (29%), Gaps = 2/148 (1%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVV 65
L + +SGC + + + + + + + + G
Sbjct: 8 VLITLTLGLMSGCAQTATPYPAQAQTRDLLDTDNDGVINARDNCRQTTSGAMINNDGCS- 66
Query: 66 SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKN 125
+ + I V + L + + + L P + + T G+
Sbjct: 67 -KSLNQIQERTKVVMFDFDSSHLTNSEVGKVSELLGDLMNLPEARLLLIGDTSPEGSDSY 125
Query: 126 NLLISQERADVIKSYLIQRGVSSNRFIS 153
N ++Q R D I+ + G + IS
Sbjct: 126 NRALAQRRVDTIQELAKEVGFPTQSIIS 153
>gi|229148738|ref|ZP_04276988.1| Ferrichrome-binding periplasmic protein [Bacillus cereus m1550]
gi|229176928|ref|ZP_04304324.1| Ferrichrome-binding periplasmic protein [Bacillus cereus 172560W]
gi|228606601|gb|EEK64026.1| Ferrichrome-binding periplasmic protein [Bacillus cereus 172560W]
gi|228634746|gb|EEK91325.1| Ferrichrome-binding periplasmic protein [Bacillus cereus m1550]
Length = 306
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 38/103 (36%), Gaps = 10/103 (9%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L +S+ + +S C +S +KK ++T G ++ + +
Sbjct: 1 MKKLFISLTVLFVLVMSACSNSSTDKKDDAKGSKSETITYQSEDGKKVEVPANPKR---- 56
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIAT 101
+VV + V++ V +F L+ +A
Sbjct: 57 ---VVVLSSFAGNVMSLGVNLVGVDSWSKQNPRFDSKLKDVAE 96
>gi|52080952|ref|YP_079743.1| YqiH [Bacillus licheniformis ATCC 14580]
gi|52786329|ref|YP_092158.1| YqiH [Bacillus licheniformis ATCC 14580]
gi|52004163|gb|AAU24105.1| YqiH [Bacillus licheniformis ATCC 14580]
gi|52348831|gb|AAU41465.1| YqiH [Bacillus licheniformis ATCC 14580]
Length = 106
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 8/77 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L +F M ++GCG D K G E F
Sbjct: 1 MRKGVILVLFAMLLLAGCGTTQHN--------GQSGDESRKGTGEETLVKEGTFVGLADQ 52
Query: 61 TGIVVSRIGDMITCYIP 77
+ V+ G +P
Sbjct: 53 HTVAVNIDGKETMFQVP 69
>gi|114778850|ref|ZP_01453649.1| hypothetical protein SPV1_12907 [Mariprofundus ferrooxydans PV-1]
gi|114550885|gb|EAU53450.1| hypothetical protein SPV1_12907 [Mariprofundus ferrooxydans PV-1]
Length = 267
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Query: 2 IKELGLSMFIMTTISGCGLA--SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K LS+ + ++GC A R + + + ++ + ++ A +
Sbjct: 9 MKR-YLSIVAIGLLAGCSTAYQQRTATQGAVVGAATGAVIGAQSDQVVEGAVIGGVLGGL 67
Query: 60 DTGIVVSRIGDMITCYIP 77
++ D I P
Sbjct: 68 VGAMLADNRDDRIHESAP 85
>gi|327402468|ref|YP_004343306.1| hypothetical protein Fluta_0462 [Fluviicola taffensis DSM 16823]
gi|327317976|gb|AEA42468.1| hypothetical protein Fluta_0462 [Fluviicola taffensis DSM 16823]
Length = 147
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 41/117 (35%), Gaps = 22/117 (18%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDT-----------------DIVNKRFG 44
+K L L+ + + +GC A + +K+ K T + +
Sbjct: 1 MKRLFLTGIVAISFAGCSSAQKTEKEGKDSKIPVTVQDAFKKQFPTITDMDWEQEGPNYE 60
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF-----LEKKFLPML 96
+ + E E + + +G+++ +M +P + + +++ +L
Sbjct: 61 AEFENGEVETSVVINASGVILETETEMEPSALPKAILDYLDANYKGQKIKEAAKIVL 117
>gi|297516111|ref|ZP_06934497.1| hypothetical protein EcolOP_00655 [Escherichia coli OP50]
Length = 164
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 1 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGITVSINGADQRTDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQIVTLTASRDLRF 78
>gi|325846838|ref|ZP_08169716.1| conserved domain protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481210|gb|EGC84253.1| conserved domain protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 326
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR--FGSSLDKAEDEFQMQ 57
M K++ L++ + ++ C L S+ K ++ G S D +
Sbjct: 1 MKKKIALALCLSLVLTSCSLKSKNNDKSNSNELKSQSNTQNNLIIGESKDNKSNNLSKS 59
>gi|323486327|ref|ZP_08091652.1| hypothetical protein HMPREF9474_03403 [Clostridium symbiosum
WAL-14163]
gi|323400309|gb|EGA92682.1| hypothetical protein HMPREF9474_03403 [Clostridium symbiosum
WAL-14163]
Length = 528
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 23/85 (27%), Gaps = 5/85 (5%)
Query: 1 MIKELGLSMFI----MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K+L + + T++GC +K K G D+ +
Sbjct: 1 MKKKLMALLLVFTMTAGTLAGCATPGSSEKPAASETGAKQGEEGKSAGQE-DRITLTYAQ 59
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVS 81
+ IT + +
Sbjct: 60 TKDVDSLDPRNATSTITAAMMAQIF 84
>gi|289551771|ref|YP_003472675.1| hypothetical protein SLGD_02483 [Staphylococcus lugdunensis
HKU09-01]
gi|289181302|gb|ADC88547.1| hypothetical protein SLGD_02483 [Staphylococcus lugdunensis
HKU09-01]
Length = 207
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 35/117 (29%), Gaps = 8/117 (6%)
Query: 1 MIKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL---DKAEDEFQ 55
M K + ++ IM +S C + + + V K + +K +
Sbjct: 1 MKKRIIYALLFTIMLVLSACSNGDIDDNDHHANGIHAPKNVKKITEKDIFSSNKQNKKLS 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL-PMLQLIATILNKFPSTVI 111
+ + I + I S++ + + A L++ + +
Sbjct: 61 EKEMNQAIQKYLDVNSIIL--DNKYLMQSKLDKQSDSQNKVTDKQAKELSQLSNNAV 115
>gi|312116152|ref|YP_004013748.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
gi|311221281|gb|ADP72649.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
Length = 568
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 62/174 (35%), Gaps = 14/174 (8%)
Query: 24 EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMIT--------CY 75
E+ + + D + + + + + + ++ + G + + +
Sbjct: 399 EELQGAVSAIMDKLAAIEARIEAGNASLADLKARVAEQGETLKTVSAQVFSPQQRFTEWA 458
Query: 76 IPVHVSFVSEVFLE-KK-FLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
+ F + +A + + + TDS+G + N + QER
Sbjct: 459 RRNAIFFGDGTKFRNPDIASRKIAELAA-IVANSDIRLLVVGFTDSLGQSERNQQLGQER 517
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN 187
A + L++ GV+ +R +V + T +T NN+R+E Q+ G
Sbjct: 518 AKAVVDELVKLGVAEDRLATVSRRTET--VITTETGAT-SNNRRVEFQLALEGE 568
>gi|239950069|gb|ACS36764.1| outer membrane protein P5 [Ornithobacterium rhinotracheale]
Length = 301
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNK--FPSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L + T + + + + +TD IG NL +SQ+RA
Sbjct: 221 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQKRA 280
Query: 135 DVIKSYLIQRGVSSNRFISVRG 156
+ + +Y++ + + ++ G
Sbjct: 281 ETVANYIVSK-GVNPANVTAVG 301
>gi|168485741|ref|ZP_02710249.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
CDC1087-00]
gi|183571112|gb|EDT91640.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
CDC1087-00]
Length = 238
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 10/107 (9%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + LS + T++ C + ++ + S ++ + ++ +
Sbjct: 1 MKKRYVILSGLLALTLAACSQEKPKVEENTQKTEQSSQPEGTVGSKSQASSQKKAEVVNK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
+ D I + L + +
Sbjct: 61 GDYYSIQGKYDEIVIANKHYPLSKDYNPGENPTAKAELLKLIAAMQA 107
>gi|82750003|ref|YP_415744.1| hypothetical protein SAB0240 [Staphylococcus aureus RF122]
gi|82655534|emb|CAI79928.1| hypothetical protein SAB0240 [Staphylococcus aureus RF122]
Length = 125
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 36/115 (31%), Gaps = 8/115 (6%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K + + + ++GC + +K + + +NK + + + + +
Sbjct: 1 MMKRILVVFLMLAIVLAGCSNKGEKYQKDIDKVYKEQNQMNKIASKVQNTIKTDIKKEDS 60
Query: 60 DTGIVVSRIGDMITCYI----PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+T V + G +I I + ++ + +
Sbjct: 61 NTH--VYKDGKVIVIGIQLYKDREKMYYFAYEIK-DGKAEINREIDPIKYMKDHK 112
>gi|15676899|ref|NP_274045.1| hypothetical protein NMB1010 [Neisseria meningitidis MC58]
gi|7226250|gb|AAF41411.1| hypothetical protein NMB1010 [Neisseria meningitidis MC58]
gi|316985891|gb|EFV64832.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
gi|325140270|gb|EGC62795.1| putative lipoprotein [Neisseria meningitidis CU385]
gi|325144413|gb|EGC66715.1| putative lipoprotein [Neisseria meningitidis M01-240013]
gi|325200305|gb|ADY95760.1| putative lipoprotein [Neisseria meningitidis H44/76]
Length = 187
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 14/102 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L L + +S CG S E+ + + S D +
Sbjct: 1 MKILALLIAATCALSACGSQSEEQPASAQPQEQAQSELKTMPVSYTDYQSAA------NK 54
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
G+ + G +P HV + + +L + L
Sbjct: 55 GLNDQKTG----LTLPEHVVPIDNA----EGKNLLHDFSDGL 88
>gi|119716317|ref|YP_923282.1| hypothetical protein Noca_2086 [Nocardioides sp. JS614]
gi|119536978|gb|ABL81595.1| hypothetical protein Noca_2086 [Nocardioides sp. JS614]
Length = 402
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 38/168 (22%), Gaps = 25/168 (14%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFL--HKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
L ++ + ++ C S EK + TD + G+++ +
Sbjct: 6 RLTAAVALAMVLTACASTSGEKTDPAESPSPAVTTDPAVQPQGTAIRRGPSALDDPADPD 65
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ-------LIATILN-KFPSTVIAI 113
+ + P +P + L P + +
Sbjct: 66 LPTPLIDVEDLMSGGP-----------PPDGIPAIDHPVFEPVADVDWLKPDEPVMSLTV 114
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI----SVRGF 157
T + + N + +VRG
Sbjct: 115 SGVTKAYPIRIMTWHEIVNDRLGGVPVAVTYCPLCNSGVAFERTVRGH 162
>gi|258621908|ref|ZP_05716938.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|262165821|ref|ZP_06033558.1| hypothetical protein VMA_002270 [Vibrio mimicus VM223]
gi|258585846|gb|EEW10565.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|262025537|gb|EEY44205.1| hypothetical protein VMA_002270 [Vibrio mimicus VM223]
Length = 395
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 29/104 (27%), Gaps = 5/104 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L ++F+ + GC + ++ D + KR + Q
Sbjct: 1 MNKPLTTAVFLTFALLGCQSEDTQTTQLSPQAKADAVVAQKRQLAESFSQNYATYAQTLK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
T I D ++ + V ++ L
Sbjct: 61 TQIT----ADNLSVSMSDLVDVAPSAEFSQQLRSA-DKSVRSLK 99
>gi|291326898|ref|ZP_06126260.2| YajG [Providencia rettgeri DSM 1131]
gi|291312432|gb|EFE52885.1| YajG [Providencia rettgeri DSM 1131]
Length = 215
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASRE---KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+++L + + ++GC +S + K+ L N T SS+D ++ +
Sbjct: 23 MLRKLCFPLLGLFLLAGCATSSNTLSLEPKIALPAKNPTLNATSISVSSVDNRTNKSLAE 82
Query: 58 LQDTGIVV 65
+ G +V
Sbjct: 83 VNRNGSLV 90
>gi|186470896|ref|YP_001862214.1| hypothetical protein Bphy_6111 [Burkholderia phymatum STM815]
gi|184197205|gb|ACC75168.1| conserved hypothetical protein [Burkholderia phymatum STM815]
Length = 168
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 12/146 (8%), Positives = 39/146 (26%), Gaps = 17/146 (11%)
Query: 2 IKELGLSMF--IMTTISGCGLASRE-----KKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
++ + L+ ++ ++ C + + + + + + + + + + E
Sbjct: 1 MRLIPLATACTLVLLLAACASSDPKLHDPLRLDLTVSAATTVNPDGQGRAAPIVVRVYEL 60
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI-------LNKF- 106
+ + D + + E L ++ IA L ++
Sbjct: 61 KTDNAFKAADYFSVQDRDKTVLADDLVKRDEFQLRPGEHQTIRRIADPGTTTLGVLAEYR 120
Query: 107 --PSTVIAIQSHTDSIGTLKNNLLIS 130
P V + S
Sbjct: 121 DLPHAVWRTVYPLPATPEKAWYRFSS 146
>gi|148266726|ref|YP_001245669.1| hypothetical protein SaurJH9_0286 [Staphylococcus aureus subsp.
aureus JH9]
gi|150392767|ref|YP_001315442.1| hypothetical protein SaurJH1_0293 [Staphylococcus aureus subsp.
aureus JH1]
gi|161508572|ref|YP_001574231.1| hypothetical protein USA300HOU_0322 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253735044|ref|ZP_04869209.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH130]
gi|258413577|ref|ZP_05681852.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258421299|ref|ZP_05684226.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258439047|ref|ZP_05690138.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258444283|ref|ZP_05692617.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258448620|ref|ZP_05696733.1| lipoprotein [Staphylococcus aureus A6224]
gi|258453104|ref|ZP_05701097.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|258455857|ref|ZP_05703812.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|282893459|ref|ZP_06301692.1| hypothetical protein SGAG_00812 [Staphylococcus aureus A8117]
gi|282922272|ref|ZP_06329963.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|282926411|ref|ZP_06334043.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|294849949|ref|ZP_06790687.1| hypothetical protein SKAG_02038 [Staphylococcus aureus A9754]
gi|295405572|ref|ZP_06815382.1| hypothetical protein SMAG_00726 [Staphylococcus aureus A8819]
gi|297209184|ref|ZP_06925583.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297245480|ref|ZP_06929348.1| hypothetical protein SLAG_01575 [Staphylococcus aureus A8796]
gi|300911185|ref|ZP_07128634.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|147739795|gb|ABQ48093.1| hypothetical protein SaurJH9_0286 [Staphylococcus aureus subsp.
aureus JH9]
gi|149945219|gb|ABR51155.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
JH1]
gi|160367381|gb|ABX28352.1| hypothetical protein USA300HOU_0322 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253726987|gb|EES95716.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH130]
gi|257839824|gb|EEV64293.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257842723|gb|EEV67145.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257847923|gb|EEV71919.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257850542|gb|EEV74490.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257858251|gb|EEV81139.1| lipoprotein [Staphylococcus aureus A6224]
gi|257859314|gb|EEV82169.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|257862069|gb|EEV84842.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|282591740|gb|EFB96811.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282593398|gb|EFB98393.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|282764145|gb|EFC04272.1| hypothetical protein SGAG_00812 [Staphylococcus aureus A8117]
gi|294823083|gb|EFG39514.1| hypothetical protein SKAG_02038 [Staphylococcus aureus A9754]
gi|294969647|gb|EFG45666.1| hypothetical protein SMAG_00726 [Staphylococcus aureus A8819]
gi|296886117|gb|EFH25051.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297177466|gb|EFH36717.1| hypothetical protein SLAG_01575 [Staphylococcus aureus A8796]
gi|300887364|gb|EFK82560.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|320139391|gb|EFW31270.1| hypothetical protein HMPREF9528_02472 [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320142943|gb|EFW34739.1| hypothetical protein HMPREF9529_01713 [Staphylococcus aureus subsp.
aureus MRSA177]
Length = 125
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 36/115 (31%), Gaps = 8/115 (6%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K + + + ++GC + +K + + +NK + + + + +
Sbjct: 1 MMKRILVVFLMLAIILAGCSNKGEKYQKDIDKVYKEQNQMNKIASKVQNTIKTDIKQEDS 60
Query: 60 DTGIVVSRIGDMITCYI----PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+T V + G +I I + ++ + +
Sbjct: 61 NTH--VYKDGKVIVIGIQLYKDREKMYYFAYEIK-DGKAEINREIDPIKYMKDHK 112
>gi|290891779|ref|ZP_06554776.1| lipoprotein [Listeria monocytogenes FSL J2-071]
gi|290558373|gb|EFD91890.1| lipoprotein [Listeria monocytogenes FSL J2-071]
Length = 120
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 6/43 (13%), Positives = 15/43 (34%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF 43
M K + +F ++ C ++E + + + V
Sbjct: 1 MKKTSIIFIFCALLLTACSSTTKETPRQTTEATGTIEQVETES 43
>gi|52142000|ref|YP_084829.1| lipoprotein [Bacillus cereus E33L]
gi|51975469|gb|AAU17019.1| possible lipoprotein [Bacillus cereus E33L]
Length = 303
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 48/169 (28%), Gaps = 21/169 (12%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K + + + + +SGCG + + G +A+ E Q + +
Sbjct: 6 KGILVGVLCVAVVSGCGTKVSD------------VALVSDIGGHTVEAKAEVQDSI--SL 51
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ ++ + F E KF + +A+ + K +
Sbjct: 52 VDGRTDTEVKKLDLSSLGYFEDEA----KFKKSVTKVASEVGKSVDKKMVPSRVAPDGSW 107
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +++ L S+ + + K P T G
Sbjct: 108 QEGKPSYELMEKELVDKLLNVGMWDSSYQLPIV---EKKPTATLSDAQG 153
>gi|152979701|ref|YP_001345330.1| hypothetical protein Asuc_2049 [Actinobacillus succinogenes 130Z]
gi|150841424|gb|ABR75395.1| conserved hypothetical protein; putative conserved domain
[Actinobacillus succinogenes 130Z]
Length = 138
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 1 MIKELGLSMFI--MTTISGCGLASREKKKVFLHKSNDTDI 38
M+K+L +S + ++GC +K + SN
Sbjct: 1 MMKKLLISALLGVGVLLTGCATIVGDKTQTISINSNPAGA 40
>gi|332885182|gb|EGK05433.1| hypothetical protein HMPREF9456_02634 [Dysgonomonas mossii DSM
22836]
Length = 487
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 12/107 (11%)
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKF------LPMLQLIATILNKFPSTVIA---I 113
+ V D T V L + F + + + I I
Sbjct: 186 VEVKARKDRHTATFNYIV---DRYELLRDFGNNQSEFDQVDRVIGEIQNNNDLQITEFSI 242
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
+ G ++N ++S+ RA+ YL+ + + +V GF
Sbjct: 243 AGYASPEGGFEHNKVLSENRANSFADYLVTKFGITRNKFTVEGFGED 289
>gi|323698237|ref|ZP_08110149.1| peptidase M16 domain protein [Desulfovibrio sp. ND132]
gi|323458169|gb|EGB14034.1| peptidase M16 domain protein [Desulfovibrio desulfuricans ND132]
Length = 902
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-SLDKAEDEFQMQLQ 59
MI++L L + ++ C A+ K+ + T S ++L+
Sbjct: 1 MIRKLILLTGLALILAACQTATMNKRTETVPTPAPTTAKAAALPSLDGSDQAATHIVRLK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ V+ + D +
Sbjct: 61 NGLTVLIKEDDRFPLVNVRLYVHAGSAYETPD 92
>gi|262171343|ref|ZP_06039021.1| hypothetical protein VII_002159 [Vibrio mimicus MB-451]
gi|261892419|gb|EEY38405.1| hypothetical protein VII_002159 [Vibrio mimicus MB-451]
Length = 395
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 29/104 (27%), Gaps = 5/104 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L ++F+ + GC + ++ D + KR + Q
Sbjct: 1 MNKPLTTAVFLTFALLGCQSEDTQTTQLSPQAKADAVVAQKRQLAESFSQNYATYAQTLK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
T I D ++ + V ++ L
Sbjct: 61 TQIT----ADNLSVSMSDLVDVAPSAEFSQQLRSA-DKSVRSLK 99
>gi|258624923|ref|ZP_05719850.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258582779|gb|EEW07601.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 395
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 29/104 (27%), Gaps = 5/104 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L ++F+ + GC + ++ D + KR + Q
Sbjct: 1 MNKPLTTAVFLTFALLGCQSEDTQTTQLSPQAKADAVVAQKRQLAESFSQNYATYAQTLK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
T I D ++ + V ++ L
Sbjct: 61 TQIT----ADNLSVSMSDLVDVAPSAEFSQQLRSA-DKSVRSLK 99
>gi|227500878|ref|ZP_03930927.1| conserved hypothetical protein [Anaerococcus tetradius ATCC
35098]
gi|227216982|gb|EEI82367.1| conserved hypothetical protein [Anaerococcus tetradius ATCC
35098]
Length = 226
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI---VNKRFGSSLDKAEDEFQMQ 57
M ++ +++ T++ CG A+ EKK ++ ++ K K E + +
Sbjct: 1 MKNKILVAILAALTLTACGKANTEKKAEEKPETKQEEVKKEDAKEVKEDDKKQEAKKDDK 60
Query: 58 LQD 60
+
Sbjct: 61 TEA 63
>gi|330877221|gb|EGH11370.1| hypothetical protein PSYMP_17171 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 987
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 800 DLGSVSFAPGASDLSAEAQKALDKLSAALKERPDLKLEIEG 840
>gi|322390441|ref|ZP_08063961.1| hypothetical protein HMPREF8577_1431 [Streptococcus parasanguinis
ATCC 903]
gi|321142840|gb|EFX38298.1| hypothetical protein HMPREF8577_1431 [Streptococcus parasanguinis
ATCC 903]
Length = 136
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 36/96 (37%), Gaps = 7/96 (7%)
Query: 2 IKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K++ L++ + ++ C +++KV S T ++ S+ ++ ++ +
Sbjct: 1 MKKIMSILTLAVALFLTACS----QQEKVTQTSSKQTSASSQTVTSASEEQKEGVSIDGS 56
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
G ++ V + E++ +
Sbjct: 57 YRGQD-EENTILLVVTGRKGTFTVQDADGEEEAKEV 91
>gi|257469631|ref|ZP_05633723.1| hypothetical protein FulcA4_09843 [Fusobacterium ulcerans ATCC
49185]
Length = 131
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 38/112 (33%), Gaps = 18/112 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + GC K S++K E +D
Sbjct: 1 MYKKIVTFLAAGALLVGCSSIGT----------------GKNDIKSIEKQEFLLTNMYKD 44
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
I ++ GD + + V+ F ++ + + +L +A+ + P +
Sbjct: 45 ANITIAFEGDRVYGFSGVNRYFGG-AKIDGENIEVLN-VASTMMAGPENRMQ 94
>gi|241760081|ref|ZP_04758179.1| putrescine-binding periplasmic protein [Neisseria flavescens
SK114]
gi|241319535|gb|EER55965.1| putrescine-binding periplasmic protein [Neisseria flavescens
SK114]
Length = 376
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 19/66 (28%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L L + ++GCG + + N + + +D +
Sbjct: 1 MTKHLPLIVLTALALAGCGGSDKTSADKAAQTDNQKVLSIYNWSEYVDPETVAAFEKKHG 60
Query: 61 TGIVVS 66
+
Sbjct: 61 IAVTYD 66
>gi|256825310|ref|YP_003149270.1| hypothetical protein Ksed_14800 [Kytococcus sedentarius DSM 20547]
gi|256688703|gb|ACV06505.1| hypothetical protein Ksed_14800 [Kytococcus sedentarius DSM 20547]
Length = 436
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 12/117 (10%), Positives = 30/117 (25%), Gaps = 20/117 (17%)
Query: 2 IKELGLSMFIMT----TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+K L++ ++ C N + D +
Sbjct: 1 MKRTTLTLLAAMSTTVVLAACS------------DENTGGGDGGNAKADEDPKAAVLEAF 48
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPMLQLIATILNKFPSTVIAI 113
+ G + + +S + + M+ +A +L P + I +
Sbjct: 49 EKTNGAKDISTTMSLDIDQDLIRKAMSSSGTMTAQDQQMVDKVAELL---PKSKITV 102
>gi|149179707|ref|ZP_01858212.1| hypothetical protein BSG1_01790 [Bacillus sp. SG-1]
gi|148851899|gb|EDL66044.1| hypothetical protein BSG1_01790 [Bacillus sp. SG-1]
Length = 302
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 16/179 (8%), Positives = 49/179 (27%), Gaps = 25/179 (13%)
Query: 2 IKELGLSMFIMTTISGC------------GLASREKKKVFLHKSNDTDIVNKRFGSSLDK 49
+K+L L + ++GC +++++ + D + +
Sbjct: 4 MKKLLLVPAAVVLLTGCQQAEEWTKDLFSADDPKQEQEDVSNDGQQGDDTAAGIDNEEEP 63
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML----QLIATILNK 105
E++ + D+ F + + ++ +A + +
Sbjct: 64 DENQNDSSESPDPPDQTNEDDVPPSLQLESQFFNTVETV--DGKQVITNPENKLALVNKE 121
Query: 106 F-------PSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
F P ++ I +E A ++ + ++ G+
Sbjct: 122 FGLTGDYKPDDLVRPDVPFVFGNEDIEKAYIREEAAQALEEMFAAAQEAGLYLTAISGY 180
>gi|217421293|ref|ZP_03452797.1| putative liporotein [Burkholderia pseudomallei 576]
gi|254197640|ref|ZP_04904062.1| putative lipoprotein [Burkholderia pseudomallei S13]
gi|169654381|gb|EDS87074.1| putative lipoprotein [Burkholderia pseudomallei S13]
gi|217395035|gb|EEC35053.1| putative liporotein [Burkholderia pseudomallei 576]
Length = 416
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 20/64 (31%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L++ M ++GCG + + + + + G+ T
Sbjct: 1 MKRYVLAVLAMVFLAGCGGGNGSDESGSAPANTGSAPASTIPGAGQYPPAASANPTYIGT 60
Query: 62 GIVV 65
V
Sbjct: 61 YAAV 64
>gi|138895007|ref|YP_001125460.1| lipoprotein [Geobacillus thermodenitrificans NG80-2]
gi|196248422|ref|ZP_03147123.1| NLPA lipoprotein [Geobacillus sp. G11MC16]
gi|134266520|gb|ABO66715.1| Lipoprotein [Geobacillus thermodenitrificans NG80-2]
gi|196212147|gb|EDY06905.1| NLPA lipoprotein [Geobacillus sp. G11MC16]
Length = 282
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 32/92 (34%), Gaps = 4/92 (4%)
Query: 1 MIKELGLSMFIMTT---ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ +++ ++ ++ CG +S + K + G D +
Sbjct: 1 MMKKWLMALTLLLVFGTLAACGNSSSSSESSAESKEKKELTIGATSGPYSDMVNKAIKPI 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVS-EVFL 88
L+ G V+ + + ++ + L
Sbjct: 61 LEKKGYEVNVVEFSDYIQPNLALANGDLDANL 92
>gi|302669398|ref|YP_003829358.1| hypothetical protein bpr_I0024 [Butyrivibrio proteoclasticus B316]
gi|302393871|gb|ADL32776.1| hypothetical protein bpr_I0024 [Butyrivibrio proteoclasticus B316]
Length = 754
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 28/105 (26%), Gaps = 9/105 (8%)
Query: 1 MIKELGLSMFIMTTISGCG------LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
M K++ + I ++GCG S E ++ + S D
Sbjct: 8 MKKKVLAVLLIAAMLTGCGNAASVDTNSSESTSDQEAETVQNENKTDSANSGTDIVPIST 67
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVS--EVFLEKKFLPMLQ 97
L + + + IP + V + L
Sbjct: 68 NESLLGSEETIYYD-QGLVPSIPEYKVEQGLTNVVIHPSLRYRLD 111
>gi|239504183|ref|ZP_04663493.1| small protein A (tmRNA-binding) [Acinetobacter baumannii AB900]
Length = 259
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ ++ + IA + K P+ I + TD +G N +S +RA+ +
Sbjct: 152 FDRFDASAIEEGTNSVVKIAEQIKKSPTITPIIVSGFTDPLGKFSYNQELSSKRANTVAK 211
Query: 140 YLIQRGVSSNRF-ISVRGFAY-KYPIDTNDTKV---GRQNNQRIEI 180
L+Q+GV ++R I N++ N+R+ I
Sbjct: 212 LLVQQGVDASRIQIQANSQTDIYKQCSDNNSSQLIQCLAPNRRVNI 257
>gi|225075678|ref|ZP_03718877.1| hypothetical protein NEIFLAOT_00694 [Neisseria flavescens
NRL30031/H210]
gi|224952949|gb|EEG34158.1| hypothetical protein NEIFLAOT_00694 [Neisseria flavescens
NRL30031/H210]
Length = 389
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 19/66 (28%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L L + ++GCG + + N + + +D +
Sbjct: 14 MTKHLPLIVLTALALAGCGGSDKTSADKAAQTDNQKVLSIYNWSEYVDPETVAAFEKKHG 73
Query: 61 TGIVVS 66
+
Sbjct: 74 IAVTYD 79
>gi|262283488|ref|ZP_06061254.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
gi|262260979|gb|EEY79679.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
Length = 180
Score = 38.1 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 7/36 (19%), Positives = 18/36 (50%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD 37
+K++ L+ + T++ C S+ K++ +S
Sbjct: 1 MKKILLASICLLTLTACSTTSQNKQENTPKQSQSQS 36
>gi|34557279|ref|NP_907094.1| hypothetical protein WS0889 [Wolinella succinogenes DSM 1740]
gi|34482995|emb|CAE09994.1| Z5895 PROTEIN [Wolinella succinogenes]
Length = 236
Score = 38.1 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 73/221 (33%), Gaps = 40/221 (18%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHK-------SNDTDIVNKRFGSSLD---KA 50
M+ L + +F++ T+S ++ ++K + D+ L+
Sbjct: 13 MMAGLMM-IFLIITVSYMVSSAYDRKNLEKKNRELRELNDKIGDVAKTFETLQLELYNDL 71
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ----LIATIL--N 104
EF L + + I P + + ++++F +L IL
Sbjct: 72 IKEFSKDLTSWNATIDPD-NTIRFKEPDVLFDSGKSQVKERFKVVLDDFFPRYVKILSQE 130
Query: 105 KFPS--TVIAIQSHTDSIGTLKNNLLI--------SQERADVIKSYLIQRGVSSN----- 149
K+ I I+ HT S L SQ RA + Y
Sbjct: 131 KYKGDIEEIRIEGHTSSEWLNAKTLEERYLGNAALSQARAFEVLKYCFALERIKGEQDWL 190
Query: 150 -RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
+ + G ++ P+ D++ ++R+E + R + K
Sbjct: 191 IKVLRANGLSFAKPL---DSEEH---SRRVEFRTLTRSHQK 225
>gi|296876610|ref|ZP_06900659.1| conserved hypothetical protein [Streptococcus parasanguinis ATCC
15912]
gi|296432369|gb|EFH18167.1| conserved hypothetical protein [Streptococcus parasanguinis ATCC
15912]
Length = 322
Score = 38.1 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 40/150 (26%), Gaps = 4/150 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ + + ++ CG R + K+ G L + + ++ T
Sbjct: 1 MKKGLVIVLSALVLASCGRPQRTVTPKSSDTKQTSTSEKKQSGMDLKAIKAKDYSSIKGT 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
I G +V L+ IA + S V G
Sbjct: 61 WI----DGRGNELVFDDKGLVSEDVELDASSFKQKDQIAEMTVSAKSGVGGYGLLLLPKG 116
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRF 151
+S + D I + + F
Sbjct: 117 QKAGKDDVSDKSKDRIWAGQSPAYGDDDNF 146
>gi|217966273|ref|YP_002351951.1| lipoprotein [Listeria monocytogenes HCC23]
gi|217335543|gb|ACK41337.1| lipoprotein, putative [Listeria monocytogenes HCC23]
gi|307572122|emb|CAR85301.1| lipoprotein, putative [Listeria monocytogenes L99]
Length = 120
Score = 38.1 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 6/43 (13%), Positives = 15/43 (34%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF 43
M K + +F ++ C ++E + + + V
Sbjct: 1 MKKTSIIFIFCALLLTACSTTTKETPRQTTEATGTIEQVETES 43
>gi|149189030|ref|ZP_01867319.1| hypothetical protein VSAK1_21729 [Vibrio shilonii AK1]
gi|148837216|gb|EDL54164.1| hypothetical protein VSAK1_21729 [Vibrio shilonii AK1]
Length = 299
Score = 38.1 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 36/101 (35%), Gaps = 2/101 (1%)
Query: 51 EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
Q + V S + HV V+ ++ + +L+ L++ P
Sbjct: 173 RPAVIQQTSEKVAVQSTLPPERAIVEATHVFKVNSSYISNE--KVLKESIQYLHQHPDMS 230
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRF 151
I I + GT N + Q R + ++ + + G+ R
Sbjct: 231 IRIVNKHSIGGTAAYNKWLGQRRVERLRVFYTENGIDKQRM 271
>gi|29349897|ref|NP_813400.1| hypothetical protein BT_4489 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341808|gb|AAO79594.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 532
Score = 38.1 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 19/157 (12%), Positives = 43/157 (27%), Gaps = 29/157 (18%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L + + C +E+ ++++ V+ + L + Q
Sbjct: 1 MKKILLMLASAFFMFSCS---QEEGTSPINENTSNLPVSATADAQLK--FAKLLSQAASG 55
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFL------------EKKFLPML-------QLIATI 102
I V V F ++ + + F +L ++ I
Sbjct: 56 SIEVRN-----FLKKEALVQFDNDYDIFYPLIKDKKVFGNQSFRDILLSYCKEENELSQI 110
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
P I + T S + V+
Sbjct: 111 EQSLPLLNIMVPDLTLFWDFNATTWDTSDKEISVLCR 147
>gi|325294856|ref|YP_004281370.1| efflux transporter, RND family, MFP subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065304|gb|ADY73311.1| efflux transporter, RND family, MFP subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 390
Score = 38.1 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 41/118 (34%), Gaps = 15/118 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MIK+L L++ ++ I+ C E + K+ V+ ++K + + D
Sbjct: 1 MIKKLFLTIALLVLITSC--DREENVQHVEIKTVHGVKVSNVETIKIEKKDSFSGTVIPD 58
Query: 61 TGIVVS----------RIGDMITCYIPVHVSFVSEVFLEKK---FLPMLQLIATILNK 105
I+VS ++ ++ + ++ L+ + L +
Sbjct: 59 KQIMVSPKVVGYLKEIKVKVGDRVRKGEVLAVIDSSEIKPDVKKAKAALKEVEAALRE 116
>gi|237747652|ref|ZP_04578132.1| drug efflux lipoprotein [Oxalobacter formigenes OXCC13]
gi|229379014|gb|EEO29105.1| drug efflux lipoprotein [Oxalobacter formigenes OXCC13]
Length = 483
Score = 38.1 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 17/50 (34%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA 50
MIK+L L + +S C +A + +S + +
Sbjct: 1 MIKKLTLVLLAAGVLSSCSMAPNYVRPDAPIESQFPGNADDASAKTPVTQ 50
>gi|146308614|ref|YP_001189079.1| hypothetical protein Pmen_3599 [Pseudomonas mendocina ymp]
gi|145576815|gb|ABP86347.1| protein of unknown function DUF748 [Pseudomonas mendocina ymp]
Length = 960
Score = 38.1 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 6/46 (13%), Positives = 14/46 (30%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ LE L +A L + P+ + ++ +
Sbjct: 772 VDLSTVPFSAGSAQLEGDARQALDTLAKALQERPNLRLEVEGQSAQ 817
>gi|59711468|ref|YP_204244.1| heat shock protein HslJ [Vibrio fischeri ES114]
gi|59479569|gb|AAW85356.1| heat shock protein HslJ [Vibrio fischeri ES114]
Length = 147
Score = 38.1 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 10/106 (9%), Positives = 34/106 (32%), Gaps = 10/106 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD---IVNKRFGSSLDKAEDEFQMQL 58
+K+L +++ + ++ C + + + G + E E +
Sbjct: 1 MKKLLVAVSLPVLMAACASNGDNNTDAQISADMLQHHNWQLTQVDGKDIATPE-EMEAPR 59
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ G ++ G+ F + L ++ ++ + +
Sbjct: 60 LEIGEKMTANGNAGCNN------FFGQAELNEEGQFRIEKMGMTMK 99
>gi|317472866|ref|ZP_07932174.1| entericidin EcnA/B family protein [Anaerostipes sp. 3_2_56FAA]
gi|316899666|gb|EFV21672.1| entericidin EcnA/B family protein [Anaerostipes sp. 3_2_56FAA]
Length = 158
Score = 38.1 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 5/63 (7%), Positives = 17/63 (26%), Gaps = 3/63 (4%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M ++ + + ++GC +++ + + T +
Sbjct: 1 MKNKITAILACGAFVFLLAGCQSTPKDQAEATTTQDIATTAEGTENATENSTETQATASD 60
Query: 58 LQD 60
D
Sbjct: 61 TPD 63
>gi|313898681|ref|ZP_07832216.1| ABC transporter, substrate-binding protein, family 5 [Clostridium
sp. HGF2]
gi|312956565|gb|EFR38198.1| ABC transporter, substrate-binding protein, family 5 [Clostridium
sp. HGF2]
Length = 566
Score = 38.1 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 34/107 (31%), Gaps = 16/107 (14%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI------VNKRFGSSLDKAED 52
M K ++ + +++ CG +S++ + + T G +D +
Sbjct: 1 MKKLFKVMAAAACALSLTACGGSSKKSDTLVVGAEELTGTFSPLYYTGAYDGYVIDLVYN 60
Query: 53 EFQMQLQDTGI--------VVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ D + V++ G IT + V F K
Sbjct: 61 KLMEYDVDGNLQPSLAEKTDVAKDGKTITFNLRKGVKFSDGSDFTAK 107
>gi|258447162|ref|ZP_05695312.1| lipoprotein [Staphylococcus aureus A6300]
gi|257854175|gb|EEV77128.1| lipoprotein [Staphylococcus aureus A6300]
Length = 125
Score = 38.1 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 35/115 (30%), Gaps = 8/115 (6%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K + + + ++GC + +K + +NK + + + + +
Sbjct: 1 MMKRILVVFLMLAIILAGCSNKGEKYQKDIDKVYKGQNQMNKIASKVQNTIKTDIKQEDS 60
Query: 60 DTGIVVSRIGDMITCYI----PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+T V + G +I I + ++ + +
Sbjct: 61 NTH--VYKDGKVIVIGIQLYKDREKMYYFAYEIK-DGKAEINREIDPIKYMKDHK 112
>gi|239626293|ref|ZP_04669324.1| predicted protein [Clostridiales bacterium 1_7_47_FAA]
gi|239516439|gb|EEQ56305.1| predicted protein [Clostridiales bacterium 1_7_47FAA]
Length = 357
Score = 38.1 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 8/71 (11%)
Query: 1 MIKELGLSMFIMT---TISGCG-----LASREKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
M K L +++ + +++GC A+ E K ++ T+ G+ K E
Sbjct: 1 MKKRLAVTLAAVMLAGSLAGCAGGGETTAAPETKAEAQTEAAKTEAEKTEAGTEEKKEEQ 60
Query: 53 EFQMQLQDTGI 63
+ G+
Sbjct: 61 PASEATKVIGV 71
>gi|154484245|ref|ZP_02026693.1| hypothetical protein EUBVEN_01957 [Eubacterium ventriosum ATCC
27560]
gi|149734722|gb|EDM50639.1| hypothetical protein EUBVEN_01957 [Eubacterium ventriosum ATCC
27560]
Length = 558
Score = 38.1 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 47/149 (31%), Gaps = 26/149 (17%)
Query: 1 MIKE---------LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
M+K+ L + ++GCG S+ + K + T + G + D
Sbjct: 1 MMKKFGRKALALSLTAVLGASMVLTGCGGKSKNEGK---KGEDSTTKIGLTTGLASDTTA 57
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTV 110
D M IG +S L + + + +A K +P+
Sbjct: 58 DISIMTWSGDSKYYEDIGS----------MDLSTDKLTSQNVAQVYAVAKQFKKLYPNIK 107
Query: 111 IAI---QSHTDSIGTLKNNLLISQERADV 136
I + D GT K ++ +A
Sbjct: 108 INLWAKTGDPDQPGTPKWEQEMTSFKAKY 136
>gi|325128608|gb|EGC51477.1| putative putrescene ABC transporter, periplasmic
putrescine-binding protein [Neisseria meningitidis
N1568]
Length = 376
Score = 38.1 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 19/66 (28%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L L + ++GCG + + N + + +D +
Sbjct: 1 MTKHLPLIVLTALALAGCGGSDKTSADKAAQTDNQKVLSIYNWSEYVDPETVAAFEKKHG 60
Query: 61 TGIVVS 66
+
Sbjct: 61 IAVTYD 66
>gi|260771348|ref|ZP_05880274.1| hypothetical protein VFA_004412 [Vibrio furnissii CIP 102972]
gi|260613664|gb|EEX38857.1| hypothetical protein VFA_004412 [Vibrio furnissii CIP 102972]
Length = 337
Score = 38.1 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 18/91 (19%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V + L L I L P VI I DS +
Sbjct: 215 VEPEELRFEHVWASDDYVYNSYQLTPAVKAQLNTIIAALVMQPDYVIHITGGADSRMAYR 274
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVR 155
R + + I V
Sbjct: 275 RYNHQLALRRAQAAQTYLMQHGVKPAQIVVA 305
>gi|194017414|ref|ZP_03056025.1| putative peptidylprolyl isomerase [Bacillus pumilus ATCC 7061]
gi|194010686|gb|EDW20257.1| putative peptidylprolyl isomerase [Bacillus pumilus ATCC 7061]
Length = 257
Score = 38.1 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Query: 1 MIKE---LGLSMFIMTTISGCGL--ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF- 54
M+K+ ++ + ++ C A ++K+ T K +++ + +
Sbjct: 1 MMKKVSYTLIACLLSVGLAACSSNDAKQDKQNDSAKSKETTQADQKEQQKQMEEMQKKLD 60
Query: 55 QMQLQDTGIVVSRIGDMIT 73
++ D +V + D IT
Sbjct: 61 AQKIDDQKVVATVNQDKIT 79
>gi|323143513|ref|ZP_08078193.1| outer membrane assembly lipoprotein YfiO [Succinatimonas hippei YIT
12066]
gi|322416707|gb|EFY07361.1| outer membrane assembly lipoprotein YfiO [Succinatimonas hippei YIT
12066]
Length = 264
Score = 38.1 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 16/135 (11%), Positives = 36/135 (26%), Gaps = 12/135 (8%)
Query: 1 MIKELG-LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MIK L + ++ C A+ K +V + V + +S D + ++
Sbjct: 12 MIKFFLPLIVGAAVALTACSSANYNKDEVPNIAPDAMYSVAQNAMASGDFQRAKQYLEAI 71
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-----STVIAIQ 114
D+ + D + + + + I + P V+ +
Sbjct: 72 DSRYPFGELADQVQLDLIYVYYKMRDSEKTSA------QINRFMRLNPTSQYTDYVMYMT 125
Query: 115 SHTDSIGTLKNNLLI 129
Sbjct: 126 GLNQIQMRSDILQDF 140
>gi|325206161|gb|ADZ01614.1| putative lipoprotein [Neisseria meningitidis M04-240196]
Length = 187
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 14/102 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L L + +S CG S E+ + + S D +
Sbjct: 1 MKILALLIAATCALSACGSQSEEQPVSAQPQEQAQSELKTMPVSYTDYQSAA------NK 54
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
G+ + G +P HV + + +L + L
Sbjct: 55 GLNDQKTG----LTLPEHVVPIDNA----EGKNLLHDFSDGL 88
>gi|319638037|ref|ZP_07992801.1| hypothetical protein HMPREF0604_00424 [Neisseria mucosa C102]
gi|317400682|gb|EFV81339.1| hypothetical protein HMPREF0604_00424 [Neisseria mucosa C102]
Length = 307
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 5/98 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L +++ ++ I+GC ++ + T V + S + +E
Sbjct: 1 MKKLLIALLVIAAITGCESKEVKEAAKAASAAGSTATVKEAAASETPEMSEE--DLGYGD 58
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ + D F + F +Q
Sbjct: 59 PVPANLQPDE---EFNNGWEFHGADTRDPNFYDAVQKF 93
>gi|22124931|ref|NP_668354.1| hypothetical protein y1024 [Yersinia pestis KIM 10]
gi|51595305|ref|YP_069496.1| hypothetical protein YPTB0955 [Yersinia pseudotuberculosis IP
32953]
gi|108808646|ref|YP_652562.1| hypothetical protein YPA_2655 [Yersinia pestis Antiqua]
gi|108811095|ref|YP_646862.1| hypothetical protein YPN_0930 [Yersinia pestis Nepal516]
gi|145600055|ref|YP_001164131.1| hypothetical protein YPDSF_2796 [Yersinia pestis Pestoides F]
gi|149364993|ref|ZP_01887028.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|153949760|ref|YP_001402055.1| hypothetical protein YpsIP31758_3095 [Yersinia pseudotuberculosis
IP 31758]
gi|161511427|ref|NP_992158.2| hypothetical protein YP_0770 [Yersinia pestis biovar Microtus
str. 91001]
gi|165926618|ref|ZP_02222450.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165935999|ref|ZP_02224569.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011022|ref|ZP_02231920.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213000|ref|ZP_02239035.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399094|ref|ZP_02304618.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421672|ref|ZP_02313425.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423814|ref|ZP_02315567.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167471032|ref|ZP_02335736.1| hypothetical protein YpesF_24942 [Yersinia pestis FV-1]
gi|170025455|ref|YP_001721960.1| hypothetical protein YPK_3238 [Yersinia pseudotuberculosis YPIII]
gi|186894322|ref|YP_001871434.1| hypothetical protein YPTS_0996 [Yersinia pseudotuberculosis
PB1/+]
gi|218930191|ref|YP_002348066.1| hypothetical protein YPO3161 [Yersinia pestis CO92]
gi|229838765|ref|ZP_04458924.1| predicted lipoprotein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229896081|ref|ZP_04511251.1| predicted lipoprotein [Yersinia pestis Pestoides A]
gi|229899333|ref|ZP_04514476.1| predicted lipoprotein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229901323|ref|ZP_04516445.1| predicted lipoprotein [Yersinia pestis Nepal516]
gi|270489510|ref|ZP_06206584.1| putative lipoprotein [Yersinia pestis KIM D27]
gi|294504891|ref|YP_003568953.1| putative lipoprotein [Yersinia pestis Z176003]
gi|21957769|gb|AAM84605.1|AE013705_8 putative polymerase/proteinase [Yersinia pestis KIM 10]
gi|51588587|emb|CAH20195.1| putative lipoprotein [Yersinia pseudotuberculosis IP 32953]
gi|108774743|gb|ABG17262.1| lipoprotein [Yersinia pestis Nepal516]
gi|108780559|gb|ABG14617.1| putative lipoprotein [Yersinia pestis Antiqua]
gi|115348802|emb|CAL21756.1| putative lipoprotein [Yersinia pestis CO92]
gi|145211751|gb|ABP41158.1| lipoprotein [Yersinia pestis Pestoides F]
gi|149291406|gb|EDM41480.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|152961255|gb|ABS48716.1| putative lipoprotein [Yersinia pseudotuberculosis IP 31758]
gi|165916144|gb|EDR34751.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
IP275]
gi|165921546|gb|EDR38743.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165990022|gb|EDR42323.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205787|gb|EDR50267.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960591|gb|EDR56612.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051598|gb|EDR63006.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057984|gb|EDR67730.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169751989|gb|ACA69507.1| Uncharacterized lipoprotein [Yersinia pseudotuberculosis YPIII]
gi|186697348|gb|ACC87977.1| Uncharacterized lipoprotein [Yersinia pseudotuberculosis PB1/+]
gi|229681252|gb|EEO77346.1| predicted lipoprotein [Yersinia pestis Nepal516]
gi|229687735|gb|EEO79808.1| predicted lipoprotein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695131|gb|EEO85178.1| predicted lipoprotein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229701004|gb|EEO89033.1| predicted lipoprotein [Yersinia pestis Pestoides A]
gi|262362957|gb|ACY59678.1| putative lipoprotein [Yersinia pestis D106004]
gi|262366876|gb|ACY63433.1| putative lipoprotein [Yersinia pestis D182038]
gi|270338014|gb|EFA48791.1| putative lipoprotein [Yersinia pestis KIM D27]
gi|294355350|gb|ADE65691.1| putative lipoprotein [Yersinia pestis Z176003]
gi|320016347|gb|ADV99918.1| putative lipoprotein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 192
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + + ++GC S D S++ A+ L
Sbjct: 1 MLKKILFPLLAIFILAGCATTSNTLNVTPKVVLPTQDPTLMGVTISINGADQRQDAALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G ++ + F
Sbjct: 60 ---KVNRDGQLVVLTPSRDLRF 78
>gi|325121353|gb|ADY80876.1| lipoprotein involved with copper homeostasis and adhesion
[Acinetobacter calcoaceticus PHEA-2]
Length = 156
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA 50
M K L + ++ C E K +++ + +++D A
Sbjct: 1 MKKTLLSVALLSILLAACS--KNENKADTTTQASAPAQATEANNNAVDSA 48
>gi|222107892|gb|ACM44966.1| Gna2132 [Neisseria meningitidis]
Length = 473
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 18/63 (28%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAKEDAPQAGSQG 60
Query: 61 TGI 63
G
Sbjct: 61 QGA 63
>gi|153806372|ref|ZP_01959040.1| hypothetical protein BACCAC_00635 [Bacteroides caccae ATCC 43185]
gi|149131049|gb|EDM22255.1| hypothetical protein BACCAC_00635 [Bacteroides caccae ATCC 43185]
Length = 144
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 21/47 (44%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD 48
+K++ + + T ++ CG +S+ K + + +SLD
Sbjct: 1 MKKIFILVCSCTLLAACGNSSKTNKGTDTDSTTIEVVDMHNAETSLD 47
>gi|293399793|ref|ZP_06643939.1| endonuclease/exonuclease/phosphatase family protein
[Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306193|gb|EFE47436.1| endonuclease/exonuclease/phosphatase family protein
[Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 301
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Query: 2 IKELGLSMFIMTTIS---GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L ++ MT ++ GC + +K K N + + + D + L
Sbjct: 1 MKKLLCALCAMTLLATATGCSNNNADKDKKETSG-NTLVVASNNIDAKSQPDVDAQRKLL 59
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
++ G+ + + ++ H VS+ ++
Sbjct: 60 EENGVEIFGLQEVDNMTRRNHYDVVSKFKVDP 91
>gi|291616546|ref|YP_003519288.1| YajG [Pantoea ananatis LMG 20103]
gi|291151576|gb|ADD76160.1| YajG [Pantoea ananatis LMG 20103]
gi|327392977|dbj|BAK10399.1| lipoprotein [Pantoea ananatis AJ13355]
Length = 209
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + ++GC ++ + D S++ A+ L
Sbjct: 18 MLKKLLFPLLAAFILAGCASSNNTLTIQPKIQLPQRDPSLMGITVSINGADQRRDQALA- 76
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G +++ + F
Sbjct: 77 ---KVNRDGQLVSLTPSRDLRF 95
>gi|260555968|ref|ZP_05828188.1| small protein A [Acinetobacter baumannii ATCC 19606]
gi|260410879|gb|EEX04177.1| small protein A [Acinetobacter baumannii ATCC 19606]
Length = 259
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ ++ + IA + K P+T I + TD +G N +S +RA+ +
Sbjct: 152 FDRFDASAIEEGTNSVVKIAEQIKKSPTTTPIIVSGFTDPLGKFSYNQELSSKRANTVAK 211
Query: 140 YLIQRGVSSNRF-ISVRGFAY-KYPIDTNDTKV---GRQNNQRIEI 180
L+++GV +R I N++ N+R+ I
Sbjct: 212 LLVRQGVEPSRIQIQANSQTDLYKQCSDNNSSQLIQCLAPNRRVNI 257
>gi|254881879|ref|ZP_05254589.1| peptidyl-dipeptidase [Bacteroides sp. 4_3_47FAA]
gi|319641118|ref|ZP_07995821.1| peptidyl-dipeptidase [Bacteroides sp. 3_1_40A]
gi|254834672|gb|EET14981.1| peptidyl-dipeptidase [Bacteroides sp. 4_3_47FAA]
gi|317387249|gb|EFV68125.1| peptidyl-dipeptidase [Bacteroides sp. 3_1_40A]
Length = 701
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 34/101 (33%), Gaps = 8/101 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K + L+ + +SGCG ++ L + V ++ + F +
Sbjct: 1 MKHILLAACAVAILSGCGSQGKQAAPTGNPFLSEYTTPFQVPPFDQIKMEHYKPAFLQGM 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
++ + D I + L++ +L+ +
Sbjct: 61 EEQQKEI----DAIVNNPEPATFQNTIAALDQSG-ALLRKV 96
>gi|256419510|ref|YP_003120163.1| hypothetical protein Cpin_0464 [Chitinophaga pinensis DSM 2588]
gi|256034418|gb|ACU57962.1| hypothetical protein Cpin_0464 [Chitinophaga pinensis DSM 2588]
Length = 148
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 6/103 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ L L +F ++ CG +S ++ + +T IV + A D+ +
Sbjct: 1 MTRLFLILFAAVLLASCGQSSEQRT--ATVDTINTFIVKEPSAVIFRPAGDKLRSLKAA- 57
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ G I +L K + ++ AT+L
Sbjct: 58 ---IGEKGFPSLEAINKSTQTDDSAYLAAKGVKVVSTSATLLK 97
>gi|157364888|ref|YP_001471655.1| peptidase S8/S53 subtilisin kexin sedolisin [Thermotoga lettingae
TMO]
gi|157315492|gb|ABV34591.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermotoga
lettingae TMO]
Length = 558
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 8/92 (8%)
Query: 1 MIKELGLSMFI--MTTISGCGLASREKKK-----VFLHKSNDTDIVNKRFGSSLDKAEDE 53
M+K L + +F+ + ++GC S + + V + N D+ + +
Sbjct: 1 MMKRLIIVLFLSVILLLAGCMNNSVQNSQQPEGIVAAIDKGAEVMSNVVIVGYKDEYKQD 60
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE 85
++ + D +SF +
Sbjct: 61 IVNLIKSIDENATVRVD-FKLDQTNVISFSTS 91
>gi|152976064|ref|YP_001375581.1| phosphonate ABC transporter, periplasmic phosphonate-binding
protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152024816|gb|ABS22586.1| phosphonate ABC transporter, periplasmic phosphonate-binding
protein [Bacillus cytotoxicus NVH 391-98]
Length = 312
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 17/108 (15%)
Query: 1 MIKELGL----SMFIMTTISGC------GLASREKKKVFLHKSNDTDIVNKRFGSSLDKA 50
M+K++ + ++ + +SGC S EKKK ++ K+ + V + +L+
Sbjct: 1 MLKKVFMMGATAILAASLLSGCGTKESSATKSEEKKKGYVPKTLNVQFVPSQNADTLEAK 60
Query: 51 EDEFQMQLQDT-----GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ L D + VS + I + V FL
Sbjct: 61 AKPLEKLLSDKLNIPVKVSVSTNYNTIVEAMASKQVDVG--FLPPTAY 106
>gi|325134223|gb|EGC56872.1| putative lipoprotein [Neisseria meningitidis M13399]
Length = 187
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 14/102 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L L + +S CG S E+ + + S D +
Sbjct: 1 MKILALLIAATCALSACGSQSEEQPASAQPQEQAQSELKTMPVSYTDYQSAA------NK 54
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
G+ + G +P HV + + +L + L
Sbjct: 55 GLNDQKTG----LTLPEHVVPIDNA----EGKNLLHDFSDGL 88
>gi|323142520|ref|ZP_08077336.1| hypothetical protein HMPREF9443_02137 [Phascolarctobacterium sp.
YIT 12067]
gi|322412953|gb|EFY03856.1| hypothetical protein HMPREF9443_02137 [Phascolarctobacterium sp.
YIT 12067]
Length = 178
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 3/82 (3%)
Query: 2 IKELGL--SMFIMTTISGCGLASREKKKVFL-HKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L ++ + +SGC A K NK S + ++Q+
Sbjct: 9 MKKLLASTALAVTLLMSGCAGADAPDSKAAQNPAPKVQSAQNKTQQSQSAAQGTKLKLQV 68
Query: 59 QDTGIVVSRIGDMITCYIPVHV 80
I+V + + +
Sbjct: 69 DGKNIIVVLADNAAAKRLIDML 90
>gi|319762625|ref|YP_004126562.1| hypothetical protein Alide_1931 [Alicycliphilus denitrificans BC]
gi|330824715|ref|YP_004388018.1| hypothetical protein Alide2_2130 [Alicycliphilus denitrificans K601]
gi|317117186|gb|ADU99674.1| hypothetical protein Alide_1931 [Alicycliphilus denitrificans BC]
gi|329310087|gb|AEB84502.1| protein of unknown function DUF748 [Alicycliphilus denitrificans
K601]
Length = 1252
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 8/41 (19%), Positives = 12/41 (29%)
Query: 78 VHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
L+ K L IA LN P+ + +
Sbjct: 1072 SIAFAPGSAALDDKARQQLDKIAQELNNRPALKVTVAGWAQ 1112
>gi|225410160|ref|ZP_03761349.1| hypothetical protein CLOSTASPAR_05381 [Clostridium asparagiforme
DSM 15981]
gi|225042304|gb|EEG52550.1| hypothetical protein CLOSTASPAR_05381 [Clostridium asparagiforme
DSM 15981]
Length = 552
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 1 MIKELGL---SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL 47
M K+L + + + T+++GCG +S K + +++ + G L
Sbjct: 1 MKKKLSVLLCAAMVATSLAGCGGSSGAKTETTAAEASQGGQESATEGKIL 50
>gi|223985446|ref|ZP_03635506.1| hypothetical protein HOLDEFILI_02812 [Holdemania filiformis DSM
12042]
gi|223962589|gb|EEF67041.1| hypothetical protein HOLDEFILI_02812 [Holdemania filiformis DSM
12042]
Length = 268
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSN 34
+K+L + ++GC A K L
Sbjct: 1 MKKLRMLFLAALLLTGCSTAPAPKTDAELEAEG 33
>gi|242317690|ref|ZP_04816706.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|242140929|gb|EES27331.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
Length = 416
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 7/44 (15%), Positives = 18/44 (40%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS 45
+K L++ M ++GCG + + + + + G+
Sbjct: 1 MKRYVLAVLAMVFLAGCGGGNGSDESGSAPANTGSAPASTIPGA 44
>gi|237812354|ref|YP_002896805.1| hypothetical protein GBP346_A2102 [Burkholderia pseudomallei
MSHR346]
gi|254188876|ref|ZP_04895387.1| putative lipoprotein [Burkholderia pseudomallei Pasteur 52237]
gi|254259367|ref|ZP_04950421.1| putative lipoprotein [Burkholderia pseudomallei 1710a]
gi|157936555|gb|EDO92225.1| putative lipoprotein [Burkholderia pseudomallei Pasteur 52237]
gi|237505637|gb|ACQ97955.1| conserved hypothetical protein [Burkholderia pseudomallei
MSHR346]
gi|254218056|gb|EET07440.1| putative lipoprotein [Burkholderia pseudomallei 1710a]
Length = 416
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 7/44 (15%), Positives = 18/44 (40%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS 45
+K L++ M ++GCG + + + + + G+
Sbjct: 1 MKRYVLAVLAMVFLAGCGGGNGSDESGSAPANTGSAPASTIPGA 44
>gi|73668323|ref|YP_304338.1| hypothetical protein Mbar_A0781 [Methanosarcina barkeri str.
Fusaro]
gi|72395485|gb|AAZ69758.1| hypothetical protein Mbar_A0781 [Methanosarcina barkeri str.
Fusaro]
Length = 230
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 7/76 (9%), Positives = 23/76 (30%), Gaps = 3/76 (3%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K++ L + + ++ CG + K+ ++ + N + ++
Sbjct: 1 MKKISALALIILMGLFLAACGCTDSDTTKIDVNSTQPETQNNSPNVTVPEETNSPNTETE 60
Query: 59 QDTGIVVSRIGDMITC 74
+ I
Sbjct: 61 SENHTQTDSAPKKILV 76
>gi|269794495|ref|YP_003313950.1| hypothetical protein Sked_11730 [Sanguibacter keddieii DSM 10542]
gi|269096680|gb|ACZ21116.1| uncharacterized conserved protein [Sanguibacter keddieii DSM
10542]
Length = 227
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 24/61 (39%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L L++ + ++GC A ++ + D+ V+ + + D L +TG
Sbjct: 30 SLALAVASLVVLAGCSTADADQPAASGASAGDSVTVDDAWVKAADSGMSAAFGDLTNTGT 89
Query: 64 V 64
Sbjct: 90 D 90
>gi|253569735|ref|ZP_04847144.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251840116|gb|EES68198.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 532
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 19/157 (12%), Positives = 44/157 (28%), Gaps = 29/157 (18%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L + + C +E+ ++++ V+ + L + Q +
Sbjct: 1 MKKILLMLASAFFMFSCS---QEEGTSPINENTSNLPVSATADAQLK--FAKLLSQAASS 55
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFL------------EKKFLPML-------QLIATI 102
I V V F ++ + + F +L ++ I
Sbjct: 56 SIEVRN-----FLKKEALVQFDNDYDIFYPLIKDKKVSGNQSFRDILLSYCKEENELSQI 110
Query: 103 LNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKS 139
P I + T S + V+
Sbjct: 111 EQSLPLLNIMVPDLTLFWDFNATTWDTSDKEISVLCR 147
>gi|161615364|ref|YP_001589329.1| hypothetical protein SPAB_03135 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161364728|gb|ABX68496.1| hypothetical protein SPAB_03135 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|320084719|emb|CBY94510.1| Uncharacterized lipoprotein yajG Flags: Precursor [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
Length = 209
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC D S+ A+ L
Sbjct: 18 MLKKLLFPLVALFMLAGCATPPTTIDVAPKITLPQQDPSLMGVTVSITGADQRQDQALA- 76
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 77 ---KVTRNNQLVTLTASRDLRF 95
>gi|319650498|ref|ZP_08004638.1| hypothetical protein HMPREF1013_01243 [Bacillus sp. 2_A_57_CT2]
gi|317397679|gb|EFV78377.1| hypothetical protein HMPREF1013_01243 [Bacillus sp. 2_A_57_CT2]
Length = 211
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 19/59 (32%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + + + + GC A + V ++ V + + + + Q
Sbjct: 1 MKKLITMIALLSFVLFGCSNAPEQPSDVSAEAPKKSEAVKNYAPNPQVPDDRQLEKAGQ 59
>gi|291616941|ref|YP_003519683.1| YmbA [Pantoea ananatis LMG 20103]
gi|291151971|gb|ADD76555.1| YmbA [Pantoea ananatis LMG 20103]
gi|327393369|dbj|BAK10791.1| lipoprotein YmbA [Pantoea ananatis AJ13355]
Length = 194
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 10/99 (10%), Positives = 24/99 (24%), Gaps = 3/99 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD--KAEDEFQMQLQ 59
+K+ GL +S C + ++ + + L
Sbjct: 1 MKK-GLVFLAALALSACSSTVNTTYYQLPSGAASMQVIGSEANAQPTLWVQQVVVPDYLA 59
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
G+V + + L++ + L
Sbjct: 60 GNGLVYQTSDVKYVIAANNLWASPLDQQLQQTMITNLTK 98
>gi|238894008|ref|YP_002918742.1| hypothetical protein KP1_1953 [Klebsiella pneumoniae NTUH-K2044]
gi|330010374|ref|ZP_08306734.1| hypothetical protein HMPREF9538_04433 [Klebsiella sp. MS 92-3]
gi|238546324|dbj|BAH62675.1| hypothetical protein KP1_1953 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|328534566|gb|EGF61148.1| hypothetical protein HMPREF9538_04433 [Klebsiella sp. MS 92-3]
Length = 187
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 6/110 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ L+ + ++ C K L G+ L E
Sbjct: 1 MKKWLLAAAVC-VLTACSSGGESKTYYQLPVVQGGAQSAASQGARLLWVEQVSIPDYLAG 59
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
VV + D+ ++ L+++ L +A + + P V+
Sbjct: 60 NGVVYQTTDVQYVIANNNLWA---SPLDQQLRTTL--VANLSQQLPGWVV 104
>gi|256819606|ref|YP_003140885.1| hypothetical protein Coch_0767 [Capnocytophaga ochracea DSM 7271]
gi|256581189|gb|ACU92324.1| hypothetical protein Coch_0767 [Capnocytophaga ochracea DSM 7271]
Length = 396
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 11/103 (10%), Positives = 27/103 (26%), Gaps = 9/103 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ S+ + + GCG + + + + + + ++
Sbjct: 1 MKKILFSIAAIAMLVGCGSKDDDTPPNGGNGNGGNGNGTTTPTTQNNYLPAKKVKEIVSN 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
I V P + P L +L
Sbjct: 61 FIEVKNRDYNGNDPAPS---------ISSVLQPTLNRQEFVLK 94
>gi|170021194|ref|YP_001726148.1| hypothetical protein EcolC_3199 [Escherichia coli ATCC 8739]
gi|188495116|ref|ZP_03002386.1| putative lipoprotein [Escherichia coli 53638]
gi|253774578|ref|YP_003037409.1| hypothetical protein ECBD_3224 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160503|ref|YP_003043611.1| hypothetical protein ECB_00385 [Escherichia coli B str. REL606]
gi|300930265|ref|ZP_07145678.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|169756122|gb|ACA78821.1| Uncharacterized lipoprotein [Escherichia coli ATCC 8739]
gi|188490315|gb|EDU65418.1| putative lipoprotein [Escherichia coli 53638]
gi|242376215|emb|CAQ30906.1| predicted lipoprotein [Escherichia coli BL21(DE3)]
gi|253325622|gb|ACT30224.1| Uncharacterized lipoprotein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972404|gb|ACT38075.1| predicted lipoprotein [Escherichia coli B str. REL606]
gi|253976614|gb|ACT42284.1| predicted lipoprotein [Escherichia coli BL21(DE3)]
gi|300461837|gb|EFK25330.1| conserved hypothetical protein [Escherichia coli MS 187-1]
Length = 192
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 1 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGITVSINGADQRTDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQIVTLTASRDLRF 78
>gi|319788951|ref|YP_004090266.1| peptidase C11 clostripain [Ruminococcus albus 7]
gi|315450818|gb|ADU24380.1| peptidase C11 clostripain [Ruminococcus albus 7]
Length = 1207
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 10/156 (6%), Positives = 37/156 (23%), Gaps = 6/156 (3%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
+ M + ++GC + ++ ++ + S ++
Sbjct: 10 ITALMLTASLMAGCSDRAADESSQAADTASSAAPSGNKDTDSDTTGDETTSDSETTDSET 69
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI-LNKFPSTVIAIQSHTDSIGTL 123
+ + + + L L + + PST I + + +
Sbjct: 70 TDDENGLNVIDLSGEGTIADNIRLTS-----LSAVERGAFRETPSTRINVGTSAKARKWS 124
Query: 124 KNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
++ ++ + +
Sbjct: 125 DKKKEEKKKLTLMVYMVGSDLESKQAQKAATIDIGE 160
>gi|229159935|ref|ZP_04287941.1| hypothetical protein bcere0009_7360 [Bacillus cereus R309803]
gi|228623527|gb|EEK80347.1| hypothetical protein bcere0009_7360 [Bacillus cereus R309803]
Length = 198
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 40/109 (36%), Gaps = 3/109 (2%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDI-VNKRFGSSLDKAEDEFQMQ 57
M K L +F + +S C + + K++ + D I + + +S K E + +
Sbjct: 1 MKKYTLYPLMLFTLLFLSACSNSVQPKEENEVQSIKDVTIKIPETIFTSSKKNETINEDE 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ + + S +S+ + + LQ + + +
Sbjct: 61 MKQNIKTYLDYSGELYENMVPLSSAISDENVTESDRKKLQQLVDLAQQN 109
>gi|193076753|gb|ABO11465.2| putative antigen [Acinetobacter baumannii ATCC 17978]
Length = 259
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 6/106 (5%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ ++ + IA + K P+ I + TD +G N +S +RA+ +
Sbjct: 152 FDRFDASAIEEGTNSVVKIAEQIKKSPTITPIIVSGFTDPLGKFSYNQELSSKRANTVAK 211
Query: 140 YLIQRGVSSNRF-ISVRGFAY-KYPIDTNDTKV---GRQNNQRIEI 180
L+Q+GV ++R I +N++ N+R+ I
Sbjct: 212 LLVQQGVDASRIQIQANSQTDIYKQCSSNNSSQLIQCLAPNRRVNI 257
>gi|161870994|ref|YP_001600174.1| transferrin-binding protein-related protein [Neisseria
meningitidis 053442]
gi|161596547|gb|ABX74207.1| transferrin-binding protein-related protein [Neisseria
meningitidis 053442]
Length = 426
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 20/67 (29%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPAAPVVAEKETEVKEDAPQAGSQG 60
Query: 61 TGIVVSR 67
G ++
Sbjct: 61 QGAPSTQ 67
>gi|7228666|gb|AAF42567.1|AF226418_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
gi|7228674|gb|AAF42571.1|AF226422_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
gi|7228698|gb|AAF42583.1|AF226434_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
gi|7228708|gb|AAF42588.1|AF226439_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
gi|7228712|gb|AAF42590.1|AF226441_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
gi|7228714|gb|AAF42591.1|AF226442_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
gi|222107918|gb|ACM44979.1| Gna2132 [Neisseria meningitidis]
Length = 426
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 20/67 (29%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPAAPVVAEKETEVKEDAPQAGSQG 60
Query: 61 TGIVVSR 67
G ++
Sbjct: 61 QGAPSTQ 67
>gi|88859136|ref|ZP_01133777.1| lipoprotein, putative [Pseudoalteromonas tunicata D2]
gi|88819362|gb|EAR29176.1| lipoprotein, putative [Pseudoalteromonas tunicata D2]
Length = 595
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 43/160 (26%), Gaps = 14/160 (8%)
Query: 2 IKELGLSMFIMTT--ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+ L++ + T ++GC + + + V + F + + +
Sbjct: 6 LKKTTLAISLAATLGLTGCQI-----NQSTTTPAVSAAQVQQNFADYSTQFIERLWQENP 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIAIQS 115
+ + V IP S L +A LN+ T +
Sbjct: 61 EWSLWVGYGKYDHILTIPNAASREKS---LASTQAELARLATFDVEQLNQNQKTDYYLIK 117
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVR 155
+ ++ S + + N +
Sbjct: 118 NMLDKNIWQHTKFKSWQWDPSNYNVAGAFAKIINSRLEAE 157
>gi|315660058|ref|ZP_07912916.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
gi|315494959|gb|EFU83296.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
Length = 207
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 13/117 (11%), Positives = 36/117 (30%), Gaps = 8/117 (6%)
Query: 1 MIKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL---DKAEDEFQ 55
M K + ++ I+ +S C + + + V K + +K ++
Sbjct: 1 MKKRIIYALLFTIVLVLSACSNGDIDDNDHHANGIHAPKNVKKITEKDIFSSNKQNEKLS 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL-PMLQLIATILNKFPSTVI 111
+ + I + I S++ + + A L++ + +
Sbjct: 61 EKEMNQAIQKYLDVNSIIL--DNKYLMQSKLDKQSDSQNKVTDKQAKELSQLSNNAV 115
>gi|296269685|ref|YP_003652317.1| sugar ABC transporter periplasmic component-like protein
[Thermobispora bispora DSM 43833]
gi|296092472|gb|ADG88424.1| ABC-type sugar transport system periplasmic component-like
protein [Thermobispora bispora DSM 43833]
Length = 324
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 7/80 (8%), Positives = 26/80 (32%), Gaps = 9/80 (11%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIV--------NKRFGSSLDKAE 51
M +++ + ++ ++GC + +++ + D +
Sbjct: 1 MKRKIIVVAAVLLGALTGCSSGNGDQQGAAAQSEGAQAPAAKFAVITHGSAGDAFWDVVK 60
Query: 52 DEFQMQLQDTGIVVSRIGDM 71
+ + + G+ V+ D
Sbjct: 61 NGAEAAAKQYGVTVNYQSDG 80
>gi|205351756|ref|YP_002225557.1| hypothetical protein SG0456 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207855925|ref|YP_002242576.1| hypothetical protein SEN0427 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|16418952|gb|AAL19400.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|205271537|emb|CAR36355.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|206707728|emb|CAR32013.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|261245728|emb|CBG23525.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|301157056|emb|CBW16540.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|321226022|gb|EFX51073.1| Hypothetical lipoprotein YajG precursor [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323128765|gb|ADX16195.1| Uncharacterized lipoprotein yajG [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|326622148|gb|EGE28493.1| Uncharacterized lipoprotein yajG [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326626791|gb|EGE33134.1| YajG protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
gi|332987394|gb|AEF06377.1| hypothetical protein STMUK_0452 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 210
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC D S+ A+ L
Sbjct: 19 MLKKLLFPLVALFMLAGCATPPTTIDVAPKITLPQQDPSLMGVTVSITGADQRQDQALA- 77
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 78 ---KVTRNNQLVTLTASRDLRF 96
>gi|229592630|ref|YP_002874749.1| hypothetical protein PFLU5247 [Pseudomonas fluorescens SBW25]
gi|229364496|emb|CAY52342.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 972
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 13/41 (31%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L K L +A L + P+ + I+
Sbjct: 785 DLGNVSFAAGSSELNKDAEGALNKLANALKERPTLRLEIEG 825
>gi|259909257|ref|YP_002649613.1| hypothetical protein EpC_26220 [Erwinia pyrifoliae Ep1/96]
gi|224964879|emb|CAX56401.1| Putative lipoprotein [Erwinia pyrifoliae Ep1/96]
gi|283479309|emb|CAY75225.1| Uncharacterized lipoprotein yajG precursor [Erwinia pyrifoliae
DSM 12163]
Length = 192
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 4/92 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + + ++GC S + D S++ A+ L
Sbjct: 1 MLKKIIFPLLAVFVLAGCASNSNTLDVSPKIQLPQRDPGLMATTVSINGADRRSDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
V+R G ++T + F+ + LEK+
Sbjct: 60 ---KVNRDGRLVTLTPSRDLRFLLQETLEKQM 88
>gi|255505452|ref|ZP_05346170.3| hypothetical protein BRYFOR_06953 [Bryantella formatexigens DSM
14469]
gi|255267682|gb|EET60887.1| hypothetical protein BRYFOR_06953 [Bryantella formatexigens DSM
14469]
Length = 259
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 49/137 (35%), Gaps = 8/137 (5%)
Query: 2 IKELGLSMFIMTTI---SGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+ +++F M I +GCG + E+ + K ++ + + + D +
Sbjct: 20 MKKFLVALFSMVFIFSFTGCGNSLAEESEKEEPKLQESTEDSTVEQT---ENVDTNSAEG 76
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFL--EKKFLPMLQLIATILNKFPSTVIAIQSH 116
++GI++ P V + + +++ + IA ++ K + +
Sbjct: 77 SESGILIVYFSRWGNTEYPEDVDATTSASIVVDEEKYGTTEYIARMIQKNVGGDLHLIRT 136
Query: 117 TDSIGTLKNNLLISQER 133
+ + L
Sbjct: 137 REPYPVDFDELRELNHN 153
>gi|222107916|gb|ACM44978.1| Gna2132 [Neisseria meningitidis]
Length = 471
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 18/63 (28%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAKEDAPQAGSQG 60
Query: 61 TGI 63
G
Sbjct: 61 QGA 63
>gi|7228686|gb|AAF42577.1|AF226428_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
Length = 481
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 22/87 (25%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAKEDAPQAGSQG 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF 87
G ++ + +
Sbjct: 61 QGAPSAQGSQNMAAVSEENTGNGGAAT 87
>gi|269102354|ref|ZP_06155051.1| putative heat shock protein HslJ [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162252|gb|EEZ40748.1| putative heat shock protein HslJ [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 150
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 10/115 (8%), Positives = 30/115 (26%), Gaps = 5/115 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + + ++ C + K + + + M D
Sbjct: 1 MKKRLLTVLALPMMLAACASNNVN----TPAKPATAAELTGQTWVLTEVDNQVLNMAEPD 56
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ D+ + + L+ ++ + + P + ++
Sbjct: 57 VAPTLELSKDLGASGHSGCNRYFGQAELK-DGQLRIEKMGMTMMACPEPAMLVEG 110
>gi|160938307|ref|ZP_02085662.1| hypothetical protein CLOBOL_03203 [Clostridium bolteae ATCC
BAA-613]
gi|158438680|gb|EDP16437.1| hypothetical protein CLOBOL_03203 [Clostridium bolteae ATCC
BAA-613]
Length = 385
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 37/115 (32%), Gaps = 5/115 (4%)
Query: 1 MIKELGLSMFIMTTISGC--GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + + + GC S +S ++ + + E E +
Sbjct: 1 MKKSFLVILSAAMILGGCGGSGTSAATNTEKAQESASETADMQKETTQKETTEAETTVPP 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML--QLIATILNKFPSTVI 111
++ + D + +PV V SE ++ + L ++ ++ I
Sbjct: 61 KEVKELSVEEFDELLSGLPVSV-VKSEYLVQDEQYKSLYPDMLNAVIQNNTDADI 114
>gi|45435476|gb|AAS61035.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001]
Length = 194
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + + ++GC S D S++ A+ L
Sbjct: 3 MLKKILFPLLAIFILAGCATTSNTLNVTPKVVLPTQDPTLMGVTISINGADQRQDAALA- 61
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G ++ + F
Sbjct: 62 ---KVNRDGQLVVLTPSRDLRF 80
>gi|308068260|ref|YP_003869865.1| Fe3+-citrate ABC transporter periplasmic protein [Paenibacillus
polymyxa E681]
gi|305857539|gb|ADM69327.1| ABC-type Fe3+-citrate transport system, periplasmic component
[Paenibacillus polymyxa E681]
Length = 331
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 17/56 (30%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M+ L L + ++GCG A K + T D E +
Sbjct: 4 MLNSLLLFVVFTIVLAGCGAAGDSSKTEGTAGAEQTSTTAGPVTVKDDHGEVKLDK 59
>gi|223940294|ref|ZP_03632152.1| hypothetical protein Cflav_PD0614 [bacterium Ellin514]
gi|223891061|gb|EEF57564.1| hypothetical protein Cflav_PD0614 [bacterium Ellin514]
Length = 105
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + LS+F ++GC +S + + + +D +Q
Sbjct: 1 MKTLIYLSLFASLALAGCSKSSTTANQPAASGDSAMANAQNKALKVVDT--ASLNQAIQM 58
Query: 61 TGIVVSRIGDMI 72
+ R + +
Sbjct: 59 FKVQEGRNPNTL 70
>gi|160901756|ref|YP_001567337.1| hypothetical protein Pmob_0270 [Petrotoga mobilis SJ95]
gi|160359400|gb|ABX31014.1| hypothetical protein Pmob_0270 [Petrotoga mobilis SJ95]
Length = 209
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 14/145 (9%), Positives = 47/145 (32%), Gaps = 11/145 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ LS FI + G A + + + ++ + + + ++ Q ++
Sbjct: 1 MKKVFLSFFIGILLVGSLFAQV----GPAGGAPMSQVQSQDRDNQMLQVQERLQERVLSQ 56
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM------LQLI-ATILNKFPSTVIAIQ 114
+ + + + VS V ++ + + L + A + + I
Sbjct: 57 DVSPVTVTGTVKTIVDDDVSLTLSVEVDSEIYSVRVPKNLLNEVKAGESIELTGYKVVIN 116
Query: 115 SHTDSIGTLKNNLLISQERADVIKS 139
+ + + +++
Sbjct: 117 DNKNFVPLEIKYQDRIVNMQRYMEN 141
>gi|7228676|gb|AAF42572.1|AF226423_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
gi|222107912|gb|ACM44976.1| Gna2132 [Neisseria meningitidis]
Length = 426
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 20/67 (29%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPAAPVVAEKETEVKEDAPQAGSQG 60
Query: 61 TGIVVSR 67
G ++
Sbjct: 61 QGAPSTQ 67
>gi|56459827|ref|YP_155108.1| dipeptidyl peptidase IV [Idiomarina loihiensis L2TR]
gi|56178837|gb|AAV81559.1| Dipeptidyl peptidase IV [Idiomarina loihiensis L2TR]
Length = 827
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 10/94 (10%), Positives = 26/94 (27%), Gaps = 4/94 (4%)
Query: 1 MIK-ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K L +++ ++ C S + + N + S+ A + +
Sbjct: 1 MVKSRLVMAIGAALFVASCASTSPQNTNTADTQKNTPTLQANSLASAQGTAALTMEQIMA 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSE---VFLEK 90
D + + F + +
Sbjct: 61 DPDWMGRFPEQAFWSMDGEDILFYQKREGSDIRD 94
>gi|15677945|ref|NP_275117.1| transferrin-binding protein-related protein [Neisseria
meningitidis MC58]
gi|7228688|gb|AAF42578.1|AF226429_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
gi|7228694|gb|AAF42581.1|AF226432_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
gi|7228702|gb|AAF42585.1|AF226436_1 putative lipoprotein GNA2132 [Neisseria meningitidis H44/76]
gi|7228704|gb|AAF42586.1|AF226437_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
gi|7227388|gb|AAF42440.1| transferrin-binding protein-related protein [Neisseria
meningitidis MC58]
gi|239916558|gb|ACS34767.1| Gna2132 [Neisseria meningitidis]
gi|325201172|gb|ADY96627.1| Transferrin binding protein-like solute binding family protein
[Neisseria meningitidis H44/76]
Length = 488
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 18/63 (28%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAKEDAPQAGSQG 60
Query: 61 TGI 63
G
Sbjct: 61 QGA 63
>gi|25026721|ref|NP_736775.1| hypothetical protein CE0165 [Corynebacterium efficiens YS-314]
gi|259508144|ref|ZP_05751044.1| glycine betaine/choline-binding protein of an ABC superfamily ATP
binding cassette transporter [Corynebacterium efficiens
YS-314]
gi|23492000|dbj|BAC16975.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259164233|gb|EEW48787.1| glycine betaine/choline-binding protein of an ABC superfamily ATP
binding cassette transporter [Corynebacterium efficiens
YS-314]
Length = 303
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 28/96 (29%), Gaps = 5/96 (5%)
Query: 2 IKELG----LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF-QM 56
+K L ++ + GCG + ++ + IV + E
Sbjct: 1 MKTLLRTGITAVIASALLVGCGSSDTLEETATGTDTASETIVVGSQDYYSSEIIAELYAQ 60
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
L+ V R + + + V L ++
Sbjct: 61 ALEAADYDVQRDFRIGQREVYMGEVENGSVDLFPEY 96
>gi|329997527|ref|ZP_08302808.1| hypothetical protein HMPREF9538_00444 [Klebsiella sp. MS 92-3]
gi|328539032|gb|EGF65073.1| hypothetical protein HMPREF9538_00444 [Klebsiella sp. MS 92-3]
Length = 155
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREK-KKVFLHKSNDTDIVNKRFGSSLDK 49
+K++ ++ I T++GC + ++ K K + +
Sbjct: 30 MKKILVATAIALTLAGCASSGNQQLSKETEISVKSKLQEGKTTKAEVKT 78
>gi|291561377|emb|CBL40176.1| hypothetical protein CK3_03260 [butyrate-producing bacterium
SS3/4]
Length = 670
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 16/49 (32%), Gaps = 3/49 (6%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS 46
M+K +GL + +SGC ++ E +T
Sbjct: 1 MMKVGRRIGLFLAAALILSGCSNSAAEIGSSAAQTEAETSQAETERAGE 49
>gi|223985312|ref|ZP_03635388.1| hypothetical protein HOLDEFILI_02694 [Holdemania filiformis DSM
12042]
gi|223962713|gb|EEF67149.1| hypothetical protein HOLDEFILI_02694 [Holdemania filiformis DSM
12042]
Length = 270
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 20/158 (12%), Positives = 47/158 (29%), Gaps = 17/158 (10%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL--Q 59
+K+L + + I+GC A + G+ D+ + ++ L +
Sbjct: 1 MKKLLTVLCALLFIAGCSAAPSPSVSAEDRPARSG-------GNFTDQMKLAYRDDLDPE 53
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI--ATILNKFPSTVI-AIQSH 116
V R GD P F + F + L ++ + + + +
Sbjct: 54 AGADSVERQGDH-----PDSPYFSTVDFYNAESTASLTILPHFQTMQQTSEWSCGVVSAL 108
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+ + A++ + L I++
Sbjct: 109 LVLNYYDQLGEQTERTLAEMRSNGLTPEATDMESMITI 146
>gi|222107926|gb|ACM44983.1| Gna2132 [Neisseria meningitidis]
Length = 487
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 18/63 (28%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAKEDAPQAGSQG 60
Query: 61 TGI 63
G
Sbjct: 61 QGA 63
>gi|213023415|ref|ZP_03337862.1| hypothetical protein Salmonelentericaenterica_12952 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
gi|213161817|ref|ZP_03347527.1| hypothetical protein Salmoneentericaenterica_18192 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213419490|ref|ZP_03352556.1| hypothetical protein Salmonentericaenterica_17486 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213580885|ref|ZP_03362711.1| hypothetical protein SentesTyph_06609 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213616065|ref|ZP_03371891.1| hypothetical protein SentesTyp_16979 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213853065|ref|ZP_03382597.1| hypothetical protein SentesT_09521 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|224582284|ref|YP_002636082.1| hypothetical protein SPC_0459 [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|289804090|ref|ZP_06534719.1| hypothetical protein Salmonellaentericaenterica_06067 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
gi|62126690|gb|AAX64393.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|224466811|gb|ACN44641.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|322618829|gb|EFY15717.1| hypothetical protein SEEM971_11949 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322629166|gb|EFY25945.1| hypothetical protein SEEM974_09463 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|323192957|gb|EFZ78180.1| hypothetical protein SEEM581_05668 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
Length = 210
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC D S+ A+ L
Sbjct: 19 MLKKLLFPLVALFMLAGCATPPTTIDVAPKITLPQQDPSLMGVTVSITGADQRQDQALA- 77
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 78 ---KVTRNNQLVTLTASRDLRF 96
>gi|295085692|emb|CBK67215.1| hypothetical protein [Bacteroides xylanisolvens XB1A]
Length = 321
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 11/130 (8%), Positives = 33/130 (25%), Gaps = 22/130 (16%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L++ I+GC E+ + K+ + LD
Sbjct: 1 MKKILLAVTAALAITGCS--QNEEFEAPSQKAEINFNTVVTRATELDT------------ 46
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
D + ++ ++ + + + + +
Sbjct: 47 --------DGLKISGFQVYAYNTKAEEMSAAVTLSTPWINGSATYSDSKWTVSGGPYYWP 98
Query: 122 TLKNNLLISQ 131
+N +
Sbjct: 99 LAENLQFFAY 108
>gi|291521360|emb|CBK79653.1| ABC-type metal ion transport system, periplasmic
component/surface antigen [Coprococcus catus GD/7]
Length = 306
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Query: 1 MIKELGLSMFIMTTIS-----GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M K+ +++ + ++ GCG + ++ + +T ++ GS +E
Sbjct: 1 MKKKGIIALAVTAVLALGALTGCGNTTAKETTGSTDTAAETTKASETAGSEAAGSETAVS 60
Query: 56 MQL 58
+
Sbjct: 61 GET 63
>gi|226312799|ref|YP_002772693.1| efflux system [Brevibacillus brevis NBRC 100599]
gi|226095747|dbj|BAH44189.1| putative efflux system [Brevibacillus brevis NBRC 100599]
Length = 409
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 1/80 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ-D 60
K + L++ +T ++GC E ++ T + + + ++ +L
Sbjct: 5 KKPVILALLAITLVAGCSSPQAETPPTETVEAAATPVQVETVATGSVVSDSGLTAKLAPS 64
Query: 61 TGIVVSRIGDMITCYIPVHV 80
+ VS +PV +
Sbjct: 65 EEVQVSPKMGGKISSLPVKL 84
>gi|119900062|ref|YP_935275.1| hypothetical protein azo3773 [Azoarcus sp. BH72]
gi|119672475|emb|CAL96389.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 392
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 3/134 (2%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+A ++ ++ G+ + I + + + + ++ IA +
Sbjct: 255 EAAEQAFGRIVALGLATDNLAVRILFNPGSTDFWRDQ-RVSGAYPMWIRQIARE-TQAGG 312
Query: 109 TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDT 168
+ I HT G N +S RA V++ L++ + + + + G I + T
Sbjct: 313 YCLTIVGHTSRTGAENVNARLSLARARVMRDLLLREVPALSTALRIDGKGSSQNIVGSGT 372
Query: 169 KVGR-QNNQRIEIQ 181
R ++R+E +
Sbjct: 373 DDVRDSLDRRVEFR 386
>gi|150388952|ref|YP_001319001.1| nickel ABC transporter, periplasmic nickel-binding protein
[Alkaliphilus metalliredigens QYMF]
gi|149948814|gb|ABR47342.1| nickel ABC transporter, periplasmic nickel-binding protein
[Alkaliphilus metalliredigens QYMF]
Length = 545
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 19/47 (40%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL 47
++K +S+ ++T ++GC SN+ + + L
Sbjct: 7 IMKLFIMSILLITLLAGCSSGGASNTTSQDSNSNEGNTTEEVNTDEL 53
>gi|291523134|emb|CBK81427.1| ABC-type oligopeptide transport system, periplasmic component
[Coprococcus catus GD/7]
Length = 559
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 10/90 (11%), Positives = 32/90 (35%), Gaps = 6/90 (6%)
Query: 1 MIKELG---LSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEF 54
M K + L+ ++ ++GCG ++ ++ + ++ G + K +
Sbjct: 1 MKKRILPLLLTAAMVAGLAGCGSSAAKETTAASDNNQTTAESTEAGSTTGEKILKVQVGP 60
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVS 84
+ D + + G + + + +
Sbjct: 61 DPETVDPALNSAIDGGNMILHAFEGLLTLD 90
>gi|257420117|ref|ZP_05597111.1| predicted protein [Enterococcus faecalis T11]
gi|257161945|gb|EEU91905.1| predicted protein [Enterococcus faecalis T11]
Length = 542
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKK---VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK L D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLQVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|229068289|ref|ZP_04201592.1| hypothetical protein bcere0025_5040 [Bacillus cereus F65185]
gi|229077916|ref|ZP_04210526.1| hypothetical protein bcere0023_6070 [Bacillus cereus Rock4-2]
gi|229177130|ref|ZP_04304519.1| hypothetical protein bcere0005_5060 [Bacillus cereus 172560W]
gi|228606311|gb|EEK63743.1| hypothetical protein bcere0005_5060 [Bacillus cereus 172560W]
gi|228705374|gb|EEL57750.1| hypothetical protein bcere0023_6070 [Bacillus cereus Rock4-2]
gi|228714750|gb|EEL66622.1| hypothetical protein bcere0025_5040 [Bacillus cereus F65185]
Length = 173
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 9/127 (7%), Positives = 35/127 (27%), Gaps = 10/127 (7%)
Query: 1 MIKELGLS-----MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--- 52
M+K + + +M +SGC ++ +K +++ + ++ ++
Sbjct: 1 MMKRISSLFFSSLLALMLILSGCAGKEQKTEKQTGNQATSVEKISDNILDEMEGPPKNGH 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF--LEKKFLPMLQLIATILNKFPSTV 110
+ + + + ++ + I L
Sbjct: 61 TIERHVGKSEEDLKNRLKTDKVSAASTYYDKETATKAVKDSLKQHDKEIQDWLKNSKEAR 120
Query: 111 IAIQSHT 117
+ + +
Sbjct: 121 LVVNTTH 127
>gi|197336989|ref|YP_002158676.1| chitobiase [Vibrio fischeri MJ11]
gi|197314241|gb|ACH63690.1| chitobiase [Vibrio fischeri MJ11]
Length = 881
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 28/86 (32%), Gaps = 12/86 (13%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDT------DIVNKRFGSSLDKAEDE- 53
M K+ LS I+ ++GC S E+ V N G + + + E
Sbjct: 1 MFKKTLLSTLILAGLAGCSSTSSEQSAVNQLAENLDINYTVITNQGADDGLACKELQAEW 60
Query: 54 -----FQMQLQDTGIVVSRIGDMITC 74
M L +TG V I
Sbjct: 61 ASCNKVNMTLTNTGEAVDSKDWTIYF 86
>gi|42779278|ref|NP_976525.1| ABC transporter, substrate-binding protein, putative [Bacillus
cereus ATCC 10987]
gi|42735193|gb|AAS39133.1| ABC transporter, substrate-binding protein, putative [Bacillus
cereus ATCC 10987]
Length = 270
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 29/91 (31%), Gaps = 2/91 (2%)
Query: 2 IKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K++ LS+ + +S C +S ++ K K + +K ++
Sbjct: 1 MKKVLLSIVSGAVLLLSACSGSSDKEVKALDEKKITVGVTGGPHEQIFEKVKEVAAKDGL 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ I V + V+ +
Sbjct: 61 EIDIKVFNDYVAPNVSLDEKSLDVNSYQTKS 91
>gi|30040180|gb|AAP15913.1| putative polymerase/proteinase [Shigella flexneri 2a str. 2457T]
gi|56383208|gb|AAN42034.2| putative polymerase/proteinase [Shigella flexneri 2a str. 301]
gi|281599773|gb|ADA72757.1| putative polymerase/proteinase [Shigella flexneri 2002017]
Length = 226
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 35 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALA- 93
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 94 ---KVTRDNQIVTLTASRALRF 112
>gi|298385606|ref|ZP_06995164.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
gi|298261747|gb|EFI04613.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
Length = 144
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 6/47 (12%), Positives = 18/47 (38%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD 48
+K++ + ++ CG +++ + + +SLD
Sbjct: 1 MKKIIILACSCFLLAACGNSAKTNNSTGTDSTATGVVDIHNAETSLD 47
>gi|294775560|ref|ZP_06741070.1| peptidase family M3 [Bacteroides vulgatus PC510]
gi|294450610|gb|EFG19100.1| peptidase family M3 [Bacteroides vulgatus PC510]
Length = 701
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 36/101 (35%), Gaps = 8/101 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASRE---KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K + L+ + +SGCG ++ + FL + V ++ + F +
Sbjct: 1 MKHILLAACAVAILSGCGSQGKQAAPTENPFLSEYTTPFQVPPFDQIKMEHYKPAFLQGM 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
++ + D I + L++ +L+ +
Sbjct: 61 EEQQKEI----DAIVNNPEPATFQNTIAALDQSG-ALLRKV 96
>gi|253575450|ref|ZP_04852787.1| periplasmic binding protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251845097|gb|EES73108.1| periplasmic binding protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 350
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 8/86 (9%), Positives = 28/86 (32%), Gaps = 3/86 (3%)
Query: 2 IKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K L + ++ ++ C + + +N + +A ++
Sbjct: 1 MKRFITSILMVILVLALAACSSNTNTAGESNAKANNSNASTATETSAESTEAAKPTTVEF 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVS 84
D+ V+ + + + +F +
Sbjct: 61 TDSHGTVTVPVNPKSVVALDNRTFET 86
>gi|197303298|ref|ZP_03168338.1| hypothetical protein RUMLAC_02021 [Ruminococcus lactaris ATCC
29176]
gi|197297582|gb|EDY32142.1| hypothetical protein RUMLAC_02021 [Ruminococcus lactaris ATCC
29176]
Length = 187
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 27/87 (31%), Gaps = 3/87 (3%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K+ L +++ M ++GCG ++ + DT I + + D E+ +
Sbjct: 1 MKKKRMVLVMAVSAMCMMAGCGNTVKDGTEALEQGDYDTAIASFEEAAGSDDKEEAAEGY 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVS 84
+ +
Sbjct: 61 CGLGMTYYEQKQYDQALEMLEKAFDNG 87
>gi|169347380|ref|ZP_02866318.1| hypothetical protein CLOSPI_00095 [Clostridium spiroforme DSM
1552]
gi|169293997|gb|EDS76130.1| hypothetical protein CLOSPI_00095 [Clostridium spiroforme DSM
1552]
Length = 473
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 5/25 (20%), Positives = 15/25 (60%)
Query: 2 IKELGLSMFIMTTISGCGLASREKK 26
+K++ +S+ + ++GC S ++
Sbjct: 1 MKKIVISVLALLLLTGCSNNSSDQT 25
>gi|206977040|ref|ZP_03237940.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus H3081.97]
gi|217957748|ref|YP_002336292.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus AH187]
gi|222093942|ref|YP_002527993.1| ABC transporter , substrate-binding protein, putative [Bacillus
cereus Q1]
gi|229137020|ref|ZP_04265646.1| hypothetical protein bcere0013_1630 [Bacillus cereus BDRD-ST26]
gi|229194562|ref|ZP_04321364.1| hypothetical protein bcere0001_1570 [Bacillus cereus m1293]
gi|206744689|gb|EDZ56096.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus H3081.97]
gi|217065918|gb|ACJ80168.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus AH187]
gi|221237991|gb|ACM10701.1| ABC transporter, substrate-binding protein, putative [Bacillus
cereus Q1]
gi|228588924|gb|EEK46940.1| hypothetical protein bcere0001_1570 [Bacillus cereus m1293]
gi|228646431|gb|EEL02639.1| hypothetical protein bcere0013_1630 [Bacillus cereus BDRD-ST26]
Length = 270
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 29/91 (31%), Gaps = 2/91 (2%)
Query: 2 IKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K++ LS+ + +S C +S ++ K K + +K ++
Sbjct: 1 MKKVLLSIVSGAVLLLSACSGSSDKEVKALDEKKITVGVTGGPHEQIFEKVKEVAAKDGL 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ I V + V+ +
Sbjct: 61 EIDIKVFNDYVAPNVSLDEKSLDVNSYQTKS 91
>gi|150005941|ref|YP_001300685.1| peptidyl-dipeptidase [Bacteroides vulgatus ATCC 8482]
gi|149934365|gb|ABR41063.1| peptidyl-dipeptidase [Bacteroides vulgatus ATCC 8482]
Length = 701
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 36/101 (35%), Gaps = 8/101 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASRE---KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K + L+ + +SGCG ++ + FL + V ++ + F +
Sbjct: 1 MKHILLAACAVAILSGCGSQGKQAAPTENPFLSEYTTPFQVPPFDQIKMEHYKPAFLQGM 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
++ + D I + L++ +L+ +
Sbjct: 61 EEQQKEI----DAIVNNPEPATFQNTIAALDQSG-ALLRKV 96
>gi|317063867|ref|ZP_07928352.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
gi|313689543|gb|EFS26378.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
Length = 137
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 38/112 (33%), Gaps = 18/112 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + GC K S++K E +D
Sbjct: 7 MYKKIVTFLAAGALLVGCSSIGT----------------GKNDIKSIEKQEFLLTNMYKD 50
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
I ++ GD + + V+ F ++ + + +L +A+ + P +
Sbjct: 51 ANITIAFEGDRVYGFSGVNRYFGG-AKIDGENIEVLN-VASTMMAGPENRMQ 100
>gi|294777503|ref|ZP_06742954.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|319640104|ref|ZP_07994831.1| hypothetical protein HMPREF9011_00428 [Bacteroides sp. 3_1_40A]
gi|294448571|gb|EFG17120.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|317388382|gb|EFV69234.1| hypothetical protein HMPREF9011_00428 [Bacteroides sp. 3_1_40A]
Length = 412
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 31/94 (32%), Gaps = 2/94 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L++ + C +E V + D + S+ + + Q+
Sbjct: 23 MKKIFLAVATALAMFSCS--QKEPVTVTITNPLSIDRNGEMVEISMAEITGKLQLPDTAQ 80
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
IV+ G + I + ++ +
Sbjct: 81 VIVLDENGLEVPYQITYDDMLIFPASVKGDASAV 114
>gi|290474667|ref|YP_003467547.1| putative lipoprotein [Xenorhabdus bovienii SS-2004]
gi|289173980|emb|CBJ80767.1| putative lipoprotein [Xenorhabdus bovienii SS-2004]
Length = 192
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ S+ + ++GC + D K S+ + L
Sbjct: 1 MLKKIFTSLLALFFLAGCANSGNTLAIQPKITLPPVDPTMKAITISISGVDHRQSQALAQ 60
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 61 ----VNRDARLVTLTPSRDLRF 78
>gi|254881097|ref|ZP_05253807.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|254833890|gb|EET14199.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
Length = 403
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 31/94 (32%), Gaps = 2/94 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L++ + C +E V + D + S+ + + Q+
Sbjct: 14 MKKIFLAVATALAMFSCS--QKEPVTVTITNPLSIDRNGEMVEISMAEITGKLQLPDTAQ 71
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
IV+ G + I + ++ +
Sbjct: 72 VIVLDENGLEVPYQITYDDMLIFPASVKGDASAV 105
>gi|253998645|ref|YP_003050708.1| peptidase M48 Ste24p [Methylovorus sp. SIP3-4]
gi|313200718|ref|YP_004039376.1| peptidase m48 [Methylovorus sp. MP688]
gi|253985324|gb|ACT50181.1| peptidase M48 Ste24p [Methylovorus sp. SIP3-4]
gi|312440034|gb|ADQ84140.1| peptidase M48 [Methylovorus sp. MP688]
Length = 279
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 7/87 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHK-------SNDTDIVNKRFGSSLDKAEDE 53
M K L L+ + TT+SGC S K ++ + + + ++
Sbjct: 1 MRKTLILAFLVATTLSGCATTSTTKSGAVGVDRKQYVGLVSEQEAEQQSALAYQQTLKEA 60
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHV 80
+L +T ++ I + V
Sbjct: 61 ESKKLLNTDSKETQRVRAIAQRLIAQV 87
>gi|261406617|ref|YP_003242858.1| family 1 extracellular solute-binding protein [Paenibacillus sp.
Y412MC10]
gi|261283080|gb|ACX65051.1| extracellular solute-binding protein family 1 [Paenibacillus sp.
Y412MC10]
Length = 508
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Query: 1 MIKELG----LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
M K L + + M+ ++GCG + S L+ AE
Sbjct: 1 MKKRLLGLLAVILIAMSALAGCGSSGGNGDTGSGTPGTQGSTPEAGGASGLEPAE 55
>gi|153952272|ref|YP_001397892.1| membrane liproprotein MapA [Campylobacter jejuni subsp. doylei
269.97]
gi|152939718|gb|ABS44459.1| membrane liproprotein MapA [Campylobacter jejuni subsp. doylei
269.97]
Length = 214
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 15/165 (9%), Positives = 42/165 (25%), Gaps = 18/165 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K+ + + + +S C +V N S D E + + L
Sbjct: 1 MFKKFLIFIVPILFLSACATKQDTFAQVNQISKNSQCSSC----ESPDGFEAKIKGLLYI 56
Query: 61 TGIVVSRIGDMIT----CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + + + T + L+ + +L + + +
Sbjct: 57 SDVGIQCCANKRTLDTGIALKKVYLHRF-YDLK-EGQKILNA--------KGKKLFVDVN 106
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+++ + V+ + S + +
Sbjct: 107 FNAVFYTYLKQELEARGIVVLDNNDQNSPYVSKIDLEFISYGATQ 151
>gi|86359600|ref|YP_471492.1| hypothetical protein RHE_CH04021 [Rhizobium etli CFN 42]
gi|218461064|ref|ZP_03501155.1| hypothetical protein RetlK5_16795 [Rhizobium etli Kim 5]
gi|218662316|ref|ZP_03518246.1| hypothetical protein RetlI_24068 [Rhizobium etli IE4771]
gi|86283702|gb|ABC92765.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 86
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 5/46 (10%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS 46
M+K++ L ++ ++ C ++ + ++ +S
Sbjct: 1 MMKKIVLIGALVGALASCTAT----EQGTAIGAGTGAVIGGAVTNS 42
>gi|332983098|ref|YP_004464539.1| family 1 extracellular solute-binding protein [Mahella
australiensis 50-1 BON]
gi|332700776|gb|AEE97717.1| extracellular solute-binding protein family 1 [Mahella
australiensis 50-1 BON]
Length = 516
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 17/57 (29%), Gaps = 6/57 (10%)
Query: 1 MIKEL-GLSMFIMT-----TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
M K L L++ + +GC + ++ +S + E
Sbjct: 1 MKKSLRFLALAMAIGLMLAVFAGCSSNGGQPGNEQAPAQGTSEQAGDEVQTSQEVYE 57
>gi|325680688|ref|ZP_08160226.1| glycosyl hydrolase family 3 N-terminal domain protein [Ruminococcus
albus 8]
gi|324107468|gb|EGC01746.1| glycosyl hydrolase family 3 N-terminal domain protein [Ruminococcus
albus 8]
Length = 428
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 18/182 (9%), Positives = 50/182 (27%), Gaps = 23/182 (12%)
Query: 2 IKELGLSMFIMT---TISGCGL--------------ASREKKKVFLHKSNDTDIVNKRFG 44
+K+ ++ + + + CG + + + + G
Sbjct: 1 MKKTAIAALAIFMTFSAAACGSLGKPSGKTVTKKYGSDDRSTTAAEDNTTTAENDKSKEG 60
Query: 45 SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+S D ++ D + ++G + + + L + + ++
Sbjct: 61 TSKDGDTAALVEEILDGMTLEEKVGQLFFVRADALETGFENSVVNNDDLGGVTYVDGMMR 120
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
K + H I + N++ ++ + V + G PI
Sbjct: 121 KAME-----KYHVGGIMLYEKNIIDPEQLTEFTSELQDTADVPLFIGVKELG-GEYAPIA 174
Query: 165 TN 166
N
Sbjct: 175 NN 176
>gi|257870349|ref|ZP_05650002.1| predicted protein [Enterococcus gallinarum EG2]
gi|257804513|gb|EEV33335.1| predicted protein [Enterococcus gallinarum EG2]
Length = 198
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 23/76 (30%), Gaps = 5/76 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + +F +SGC + + DT S L E ++ +
Sbjct: 1 MKKVIFWVLFSALLLSGCSGQNGQAGASNDSDLQDTVDSLTAENSKLKSENSELSERVAN 60
Query: 61 -----TGIVVSRIGDM 71
G ++ D
Sbjct: 61 FENLFEGTSATQEDDN 76
>gi|229155362|ref|ZP_04283472.1| Axoneme-associated protein mst101(2) [Bacillus cereus ATCC 4342]
gi|228628077|gb|EEK84794.1| Axoneme-associated protein mst101(2) [Bacillus cereus ATCC 4342]
Length = 293
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 26/60 (43%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K+L + + ++ GC +++ K+ + + + A+++ ++Q
Sbjct: 2 LMKKLMMIICLILLTVGCSSKEYDQQMGLGKKAMENGQYKEAVRYFENAAKEKSTDEIQQ 61
>gi|237730411|ref|ZP_04560892.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Citrobacter
sp. 30_2]
gi|226905950|gb|EEH91868.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Citrobacter
sp. 30_2]
Length = 209
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 18 MFKKILVPFVALFMLAGCATPPTTIEVSPKITLPQQDPSLMGVTVSINGADQRQDQALA- 76
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 77 ---KVTRDNQLVTLTASRDLRF 95
>gi|320173747|gb|EFW48930.1| hypothetical lipoprotein YajG precursor [Shigella dysenteriae CDC
74-1112]
Length = 192
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 1 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQIVTLTASRDLRF 78
>gi|150389401|ref|YP_001319450.1| polysaccharide deacetylase [Alkaliphilus metalliredigens QYMF]
gi|149949263|gb|ABR47791.1| polysaccharide deacetylase [Alkaliphilus metalliredigens QYMF]
Length = 366
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K + + +F+ + GC + + I +L+ E+ +++
Sbjct: 1 MKKSIKFTIILFLSVFLIGCMTVDSNEDPTENVSGQEDQIQEDNEDEALEDQEEIEEIKE 60
Query: 59 QDTGIVVSRIGDMITCYI 76
D +V I +
Sbjct: 61 IDLQVVQPNEAGQIMVLM 78
>gi|332366803|gb|EGJ44544.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sanguinis
SK1059]
Length = 272
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 11/97 (11%), Positives = 27/97 (27%), Gaps = 2/97 (2%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K +L L + + C ++ + K+ + DK +
Sbjct: 11 MKYSKLILLAASVLVLGACSSGKDTTGDSSDKQAASSTSTVKKQDAEKDKNSSQDTTTSS 70
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
D+ + S ++ K+ +L
Sbjct: 71 DSTDTKKKQNHEAKTLDQNVSYNGSYYSVKGKYDEIL 107
>gi|325569753|ref|ZP_08145777.1| phosphate ABC superfamily ATP binding cassette transporter, binding
protein [Enterococcus casseliflavus ATCC 12755]
gi|325157058|gb|EGC69224.1| phosphate ABC superfamily ATP binding cassette transporter, binding
protein [Enterococcus casseliflavus ATCC 12755]
Length = 294
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 35/118 (29%), Gaps = 13/118 (11%)
Query: 1 MIKELGL---SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ L + ++ +SGC + T + + ++ +EFQ
Sbjct: 10 MMKKFKLLSPIIGLVILLSGCAS-------WADRGESITAVGSSALQPLVETVAEEFQNS 62
Query: 58 LQDTGIVVSRIGDMITCY-IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
I V G + + L + P + A L + I
Sbjct: 63 NPGRFINVQGGGSGTGLSQVQAGAVDIGNSDLFAEEKPGID--ADALVDHRVATVGIT 118
>gi|300690761|ref|YP_003751756.1| superoxide dismutase [Cu-Zn] [Ralstonia solanacearum PSI07]
gi|299077821|emb|CBJ50459.1| Superoxide dismutase [Cu-Zn] [Ralstonia solanacearum PSI07]
Length = 182
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 5/49 (10%), Positives = 17/49 (34%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA 50
+K+L + + + ++GC + + + + S +
Sbjct: 1 MKQLVIGLAAIGLMAGCASNAGTGASTSAPAAGTSALATLAPKSGSNVQ 49
>gi|291561724|emb|CBL40523.1| Spermidine/putrescine-binding periplasmic protein
[butyrate-producing bacterium SS3/4]
Length = 370
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 6/45 (13%), Positives = 16/45 (35%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS 45
M K + + ++ CG AS + ++ ++ +
Sbjct: 1 MKKTAAVVLCAAMMLTACGGASTTETTAAGSQAAGSETTASAEET 45
>gi|291521638|emb|CBK79931.1| amino acid ABC transporter substrate-binding protein, PAAT family
(TC 3.A.1.3.-) [Coprococcus catus GD/7]
Length = 298
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Query: 1 MIKELGLSMFIMT----TISGCGLASREKKKVFLHKSNDTDIVNKRFG 44
M K L L M + ++GCG + K + T+ V
Sbjct: 1 MKKGLALCMAAVLAMGCLLTGCGSSDTGAKSTTESAAASTEAVGTETA 48
>gi|260494705|ref|ZP_05814835.1| SpoIID-domain sporulation protein [Fusobacterium sp. 3_1_33]
gi|260197867|gb|EEW95384.1| SpoIID-domain sporulation protein [Fusobacterium sp. 3_1_33]
Length = 285
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 22/191 (11%), Positives = 53/191 (27%), Gaps = 17/191 (8%)
Query: 1 MIKELGLSMFIMTTISGCGL-ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K++ L + C + + K + + + +
Sbjct: 1 MKKKISLIFLSALVLISCSSNKAVNRVKPVKPNGDYGHSLPPNIQRGTREKIKLENTVFK 60
Query: 60 DTGIVV--SRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
G+ + + G+ I +PV+ + + +++ L F +
Sbjct: 61 KMGLPLPYNTFGEPIPYLVPVNDNHKESFSVFEEYNEN-----RALKYFKDLSVRGHGDN 115
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS-VRGFAYKYPIDTNDTKVGRQNNQ 176
K ++ S + + + ++ V G + PI T
Sbjct: 116 SPYWRWKTSIKKSDLYSKAANRLIAIYRNNPRNVLTLVNGEWQQVPIKNVGTVQ------ 169
Query: 177 RIEIQIFPRGN 187
+I + RG
Sbjct: 170 --DIIVAARGE 178
>gi|229003333|ref|ZP_04161163.1| Ferrichrome-binding periplasmic protein [Bacillus mycoides Rock1-4]
gi|228757951|gb|EEM07166.1| Ferrichrome-binding periplasmic protein [Bacillus mycoides Rock1-4]
Length = 307
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 45/115 (39%), Gaps = 9/115 (7%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L +S+ + +S C S +KK K + ++ + + + + ++
Sbjct: 1 MKKLFISLTVLFILVMSACSNGSTDKKNDSNVKGSKSETITYQSEN------GKVEVPAN 54
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAI 113
+VV + V++ V + +F L+ + + ++ +I +
Sbjct: 55 PKRVVVLSSFAGNVMSLGVNLVGVDSWSKMNPRFENKLKDVTEVSDENVEKIIEL 109
>gi|162421060|ref|YP_001607423.1| hypothetical protein YpAngola_A3057 [Yersinia pestis Angola]
gi|162353875|gb|ABX87823.1| putative lipoprotein [Yersinia pestis Angola]
Length = 192
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 36/110 (32%), Gaps = 7/110 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASRE---KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K++ + + ++GC S KV L + T + + D+ D +
Sbjct: 1 MLKKILFPLLAIFILAGCATTSNTLNVTPKVVLPTQDPTLMGVTISINGADQRRDAALAK 60
Query: 58 LQDTG----IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ G + SR + + + LQ++ L
Sbjct: 61 VNRDGQLVVLTPSRDLRFLLQEVLEKQMTARGYMIGADGAVDLQIVVNQL 110
>gi|222823812|ref|YP_002575386.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100]
gi|222539034|gb|ACM64135.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100]
Length = 199
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 16/148 (10%), Positives = 46/148 (31%), Gaps = 4/148 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + F+ + C + + + + ++ K+ +E +D
Sbjct: 1 MFKTILTLSFLSIFFTACSNEEKLDANLISSGTQFSKENLQKANDLDKKSYEEIANLFKD 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQSHTDS 119
+ S +++ + H + + L+++ + I + + + S I I
Sbjct: 61 NTNIKSDDKNILIIFSANHCLYCDK--LKEEIKND-KKIQDFIKEKYSSYYINISYKKIH 117
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVS 147
+ +S I + +
Sbjct: 118 TFYKNHKSDLSTAELSSIYDIVATPTIV 145
>gi|89107304|ref|AP_001084.1| predicted lipoprotein [Escherichia coli str. K-12 substr. W3110]
gi|90111134|ref|NP_414968.4| predicted lipoprotein [Escherichia coli str. K-12 substr. MG1655]
gi|157154980|ref|YP_001461620.1| hypothetical protein EcE24377A_0469 [Escherichia coli E24377A]
gi|157159959|ref|YP_001457277.1| hypothetical protein EcHS_A0509 [Escherichia coli HS]
gi|161486293|ref|NP_752480.2| hypothetical protein c0546 [Escherichia coli CFT073]
gi|161986571|ref|YP_309428.2| hypothetical protein SSON_0417 [Shigella sonnei Ss046]
gi|162138478|ref|YP_539490.2| hypothetical protein UTI89_C0458 [Escherichia coli UTI89]
gi|170080020|ref|YP_001729340.1| lipoprotein [Escherichia coli str. K-12 substr. DH10B]
gi|170681187|ref|YP_001742576.1| hypothetical protein EcSMS35_0475 [Escherichia coli SMS-3-5]
gi|194430598|ref|ZP_03063056.1| putative lipoprotein [Escherichia coli B171]
gi|194432606|ref|ZP_03064892.1| putative lipoprotein [Shigella dysenteriae 1012]
gi|209917650|ref|YP_002291734.1| hypothetical protein ECSE_0459 [Escherichia coli SE11]
gi|215485515|ref|YP_002327946.1| hypothetical protein E2348C_0369 [Escherichia coli O127:H6 str.
E2348/69]
gi|218553000|ref|YP_002385913.1| hypothetical protein ECIAI1_0437 [Escherichia coli IAI1]
gi|218557343|ref|YP_002390256.1| hypothetical protein ECS88_0430 [Escherichia coli S88]
gi|218688297|ref|YP_002396509.1| hypothetical protein ECED1_0457 [Escherichia coli ED1a]
gi|218693897|ref|YP_002401564.1| hypothetical protein EC55989_0448 [Escherichia coli 55989]
gi|218698654|ref|YP_002406283.1| hypothetical protein ECIAI39_0239 [Escherichia coli IAI39]
gi|227884557|ref|ZP_04002362.1| lipoprotein [Escherichia coli 83972]
gi|238899722|ref|YP_002925518.1| putative lipoprotein [Escherichia coli BW2952]
gi|256020404|ref|ZP_05434269.1| hypothetical protein ShiD9_15910 [Shigella sp. D9]
gi|256023949|ref|ZP_05437814.1| hypothetical protein E4_11288 [Escherichia sp. 4_1_40B]
gi|260842635|ref|YP_003220413.1| putative lipoprotein [Escherichia coli O103:H2 str. 12009]
gi|260853657|ref|YP_003227548.1| putative lipoprotein [Escherichia coli O26:H11 str. 11368]
gi|260866595|ref|YP_003232997.1| putative lipoprotein [Escherichia coli O111:H- str. 11128]
gi|293413689|ref|ZP_06656338.1| lipoprotein yajG [Escherichia coli B185]
gi|293418504|ref|ZP_06660939.1| lipoprotein yajG [Escherichia coli B088]
gi|300818236|ref|ZP_07098447.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300820322|ref|ZP_07100474.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300903300|ref|ZP_07121228.1| hypothetical protein HMPREF9536_01435 [Escherichia coli MS 84-1]
gi|300918185|ref|ZP_07134792.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300924160|ref|ZP_07140152.1| hypothetical protein HMPREF9548_02324 [Escherichia coli MS 182-1]
gi|300937049|ref|ZP_07151915.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300947915|ref|ZP_07162063.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300958001|ref|ZP_07170165.1| hypothetical protein HMPREF9547_03721 [Escherichia coli MS 175-1]
gi|300988013|ref|ZP_07178493.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|300997379|ref|ZP_07181719.1| hypothetical protein HMPREF9553_05190 [Escherichia coli MS 200-1]
gi|301025672|ref|ZP_07189190.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|301049639|ref|ZP_07196588.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|301301583|ref|ZP_07207718.1| hypothetical protein HMPREF9347_00139 [Escherichia coli MS 124-1]
gi|301330700|ref|ZP_07223302.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|301647358|ref|ZP_07247170.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|306813100|ref|ZP_07447293.1| hypothetical protein ECNC101_14347 [Escherichia coli NC101]
gi|307137077|ref|ZP_07496433.1| hypothetical protein EcolH7_02950 [Escherichia coli H736]
gi|307312188|ref|ZP_07591824.1| Uncharacterized lipoprotein [Escherichia coli W]
gi|309794835|ref|ZP_07689256.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|312964543|ref|ZP_07778799.1| uncharacterized lipofamily protein [Escherichia coli 2362-75]
gi|312970529|ref|ZP_07784710.1| uncharacterized lipofamily protein [Escherichia coli 1827-70]
gi|331640952|ref|ZP_08342087.1| YajG [Escherichia coli H736]
gi|331645608|ref|ZP_08346712.1| YajG [Escherichia coli M605]
gi|331651370|ref|ZP_08352395.1| YajG [Escherichia coli M718]
gi|331656489|ref|ZP_08357451.1| YajG [Escherichia coli TA206]
gi|331666788|ref|ZP_08367662.1| YajG [Escherichia coli TA271]
gi|331671980|ref|ZP_08372776.1| YajG [Escherichia coli TA280]
gi|331676105|ref|ZP_08376817.1| YajG [Escherichia coli H591]
gi|331681828|ref|ZP_08382461.1| YajG [Escherichia coli H299]
gi|83287809|sp|P0ADA6|YAJG_ECOL6 RecName: Full=Uncharacterized lipoprotein yajG; Flags: Precursor
gi|83287810|sp|P0ADA5|YAJG_ECOLI RecName: Full=Uncharacterized lipoprotein yajG; Flags: Precursor
gi|7249295|gb|AAB28883.2| orf 5' of ampG [Escherichia coli]
gi|85674574|dbj|BAE76214.1| predicted lipoprotein [Escherichia coli str. K12 substr. W3110]
gi|87081739|gb|AAC73537.2| predicted lipoprotein [Escherichia coli str. K-12 substr. MG1655]
gi|157065639|gb|ABV04894.1| putative lipoprotein [Escherichia coli HS]
gi|157077010|gb|ABV16718.1| putative lipoprotein [Escherichia coli E24377A]
gi|169887855|gb|ACB01562.1| predicted lipoprotein [Escherichia coli str. K-12 substr. DH10B]
gi|170518905|gb|ACB17083.1| putative lipoprotein [Escherichia coli SMS-3-5]
gi|194411355|gb|EDX27719.1| putative lipoprotein [Escherichia coli B171]
gi|194419167|gb|EDX35250.1| putative lipoprotein [Shigella dysenteriae 1012]
gi|209910909|dbj|BAG75983.1| putative lipoprotein [Escherichia coli SE11]
gi|215263587|emb|CAS07917.1| predicted lipoprotein [Escherichia coli O127:H6 str. E2348/69]
gi|218350629|emb|CAU96321.1| putative lipoprotein [Escherichia coli 55989]
gi|218359768|emb|CAQ97309.1| putative lipoprotein [Escherichia coli IAI1]
gi|218364112|emb|CAR01777.1| putative lipoprotein [Escherichia coli S88]
gi|218368640|emb|CAR16379.1| putative lipoprotein [Escherichia coli IAI39]
gi|218425861|emb|CAR06667.1| putative lipoprotein [Escherichia coli ED1a]
gi|222032229|emb|CAP74968.1| Uncharacterized lipoprotein yajG [Escherichia coli LF82]
gi|227838643|gb|EEJ49109.1| lipoprotein [Escherichia coli 83972]
gi|238862614|gb|ACR64612.1| predicted lipoprotein [Escherichia coli BW2952]
gi|257752306|dbj|BAI23808.1| predicted lipoprotein [Escherichia coli O26:H11 str. 11368]
gi|257757782|dbj|BAI29279.1| predicted lipoprotein [Escherichia coli O103:H2 str. 12009]
gi|257762951|dbj|BAI34446.1| predicted lipoprotein [Escherichia coli O111:H- str. 11128]
gi|260450379|gb|ACX40801.1| Uncharacterized lipoprotein [Escherichia coli DH1]
gi|291325032|gb|EFE64447.1| lipoprotein yajG [Escherichia coli B088]
gi|291433747|gb|EFF06720.1| lipoprotein yajG [Escherichia coli B185]
gi|294492452|gb|ADE91208.1| putative lipoprotein [Escherichia coli IHE3034]
gi|299880026|gb|EFI88237.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|300298576|gb|EFJ54961.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300304198|gb|EFJ58718.1| hypothetical protein HMPREF9553_05190 [Escherichia coli MS 200-1]
gi|300315268|gb|EFJ65052.1| hypothetical protein HMPREF9547_03721 [Escherichia coli MS 175-1]
gi|300404595|gb|EFJ88133.1| hypothetical protein HMPREF9536_01435 [Escherichia coli MS 84-1]
gi|300407565|gb|EFJ91103.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|300414636|gb|EFJ97946.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300419613|gb|EFK02924.1| hypothetical protein HMPREF9548_02324 [Escherichia coli MS 182-1]
gi|300452515|gb|EFK16135.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300457880|gb|EFK21373.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300527107|gb|EFK48176.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300529127|gb|EFK50189.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300843080|gb|EFK70840.1| hypothetical protein HMPREF9347_00139 [Escherichia coli MS 124-1]
gi|300843361|gb|EFK71121.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|301074503|gb|EFK89309.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|305853863|gb|EFM54302.1| hypothetical protein ECNC101_14347 [Escherichia coli NC101]
gi|306907690|gb|EFN38192.1| Uncharacterized lipoprotein [Escherichia coli W]
gi|307628097|gb|ADN72401.1| hypothetical protein UM146_15190 [Escherichia coli UM146]
gi|308121488|gb|EFO58750.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|309700695|emb|CBI99991.1| putative lipoprotein [Escherichia coli ETEC H10407]
gi|310337178|gb|EFQ02316.1| uncharacterized lipofamily protein [Escherichia coli 1827-70]
gi|312290777|gb|EFR18654.1| uncharacterized lipofamily protein [Escherichia coli 2362-75]
gi|312945011|gb|ADR25838.1| hypothetical protein NRG857_02045 [Escherichia coli O83:H1 str.
NRG 857C]
gi|315059714|gb|ADT74041.1| predicted lipoprotein [Escherichia coli W]
gi|315135116|dbj|BAJ42275.1| hypothetical protein ECDH1ME8569_0419 [Escherichia coli DH1]
gi|315256260|gb|EFU36228.1| YajG [Escherichia coli MS 85-1]
gi|315289850|gb|EFU49240.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|315294234|gb|EFU53585.1| conserved hypothetical protein [Escherichia coli MS 153-1]
gi|315299556|gb|EFU58804.1| conserved hypothetical protein [Escherichia coli MS 16-3]
gi|315616626|gb|EFU97243.1| uncharacterized lipofamily protein [Escherichia coli 3431]
gi|320178285|gb|EFW53259.1| Hypothetical lipoprotein YajG precursor [Shigella boydii ATCC
9905]
gi|320197094|gb|EFW71713.1| Hypothetical lipoprotein YajG precursor [Escherichia coli
WV_060327]
gi|320201677|gb|EFW76253.1| Hypothetical lipoprotein YajG precursor [Escherichia coli
EC4100B]
gi|323153469|gb|EFZ39723.1| hypothetical protein ECEPECA14_4587 [Escherichia coli EPECa14]
gi|323160456|gb|EFZ46404.1| hypothetical protein ECE128010_3269 [Escherichia coli E128010]
gi|323164233|gb|EFZ50040.1| hypothetical protein SS53G_5521 [Shigella sonnei 53G]
gi|323170519|gb|EFZ56169.1| hypothetical protein ECLT68_4583 [Escherichia coli LT-68]
gi|323178298|gb|EFZ63876.1| hypothetical protein ECOK1180_2809 [Escherichia coli 1180]
gi|323184736|gb|EFZ70107.1| hypothetical protein ECOK1357_1863 [Escherichia coli 1357]
gi|323191352|gb|EFZ76615.1| hypothetical protein ECRN5871_0384 [Escherichia coli RN587/1]
gi|323938619|gb|EGB34868.1| hypothetical protein ERCG_00221 [Escherichia coli E1520]
gi|323943240|gb|EGB39396.1| hypothetical protein ERDG_00210 [Escherichia coli E482]
gi|323945338|gb|EGB41394.1| hypothetical protein EREG_03109 [Escherichia coli H120]
gi|323965120|gb|EGB60579.1| hypothetical protein ERJG_03478 [Escherichia coli M863]
gi|323976082|gb|EGB71175.1| hypothetical protein ERFG_03014 [Escherichia coli TW10509]
gi|324010064|gb|EGB79283.1| hypothetical protein HMPREF9532_00192 [Escherichia coli MS 57-2]
gi|324010646|gb|EGB79865.1| hypothetical protein HMPREF9533_05343 [Escherichia coli MS 60-1]
gi|324016706|gb|EGB85925.1| hypothetical protein HMPREF9542_04660 [Escherichia coli MS 117-3]
gi|324116921|gb|EGC10834.1| hypothetical protein ERBG_03150 [Escherichia coli E1167]
gi|327254760|gb|EGE66376.1| hypothetical protein ECSTEC7V_0516 [Escherichia coli STEC_7v]
gi|330910226|gb|EGH38736.1| hypothetical lipoprotein YajG precursor [Escherichia coli AA86]
gi|331037750|gb|EGI09970.1| YajG [Escherichia coli H736]
gi|331045770|gb|EGI17896.1| YajG [Escherichia coli M605]
gi|331051111|gb|EGI23163.1| YajG [Escherichia coli M718]
gi|331054737|gb|EGI26746.1| YajG [Escherichia coli TA206]
gi|331066012|gb|EGI37896.1| YajG [Escherichia coli TA271]
gi|331070969|gb|EGI42328.1| YajG [Escherichia coli TA280]
gi|331076163|gb|EGI47445.1| YajG [Escherichia coli H591]
gi|331081030|gb|EGI52195.1| YajG [Escherichia coli H299]
gi|332085653|gb|EGI90817.1| hypothetical protein SD15574_4272 [Shigella dysenteriae 155-74]
gi|332341797|gb|AEE55131.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|333008119|gb|EGK27594.1| hypothetical protein SFVA6_0776 [Shigella flexneri VA-6]
gi|333020695|gb|EGK39955.1| hypothetical protein SFK227_0678 [Shigella flexneri K-227]
Length = 192
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 1 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQIVTLTASRDLRF 78
>gi|328957927|ref|YP_004375313.1| putative lipoprotein [Carnobacterium sp. 17-4]
gi|328674251|gb|AEB30297.1| putative lipoprotein [Carnobacterium sp. 17-4]
Length = 369
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 9/94 (9%), Positives = 23/94 (24%), Gaps = 1/94 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K+ + L + +S C + K+ D
Sbjct: 1 MNKKAIALMAACVFLLSACQTEDPDIKETESVGEETETTSQLSGDYYSAIITDGTYKTSL 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
+ G+ + ++ + +S+
Sbjct: 61 NRGVTLGLNSNVNLKAFETGLMDLSQSHFSPDSY 94
>gi|326802869|ref|YP_004320687.1| Ser/Thr phosphatase family protein [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651200|gb|AEA01383.1| Ser/Thr phosphatase family protein [Aerococcus urinae
ACS-120-V-Col10a]
Length = 630
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 22/60 (36%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK++GL + + + C + + + + ++ GS E + ++
Sbjct: 7 IKKVGLLLTSIFVLGACAETNENSDNASADSAVEESVASEDKGSEESAKESKDSKAGEEA 66
>gi|318606227|emb|CBY27725.1| putative lipoprotein protein YPO1422 [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 183
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 27/96 (28%), Gaps = 6/96 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K +++ +S C + S + L L
Sbjct: 1 MMKW--MAVIAALLLSACSSTPSKTYYQLPALSAPAGATSSVASRQLWVEHVSVADYLAA 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
G+ V + D+ ++ L+++ L
Sbjct: 59 AGV-VYQTNDVQYVIASNNLWA---SPLDQQLQQTL 90
>gi|262372549|ref|ZP_06065828.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262312574|gb|EEY93659.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 157
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVF 29
+K+L LS F + GC + + V
Sbjct: 1 MKKLLLSSFFTLALVGCASTPEQSQNVA 28
>gi|157145929|ref|YP_001453248.1| outer membrane receptor FepA [Citrobacter koseri ATCC BAA-895]
gi|157083134|gb|ABV12812.1| hypothetical protein CKO_01682 [Citrobacter koseri ATCC BAA-895]
Length = 766
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 53/161 (32%), Gaps = 8/161 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MIK+ + + I+G + +N + +K +
Sbjct: 1 MIKKAYKLSLLSSLIAGSLAIPAVQADDIKTAANQ-KAEQTNASNPPEKQAARDKEINSG 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+VV+ + VS + ++K P+ + +A I+ P + + +++S
Sbjct: 60 ETMVVTAKEQTLQ---APGVSIIDSEAIKK--RPIQRDVAEIIRTMPG--VNLTGNSNSG 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
N + + LI S+R G++ +
Sbjct: 113 QRGNNRQIDIRGMGPENTLILIDGMPVSSRNSVRYGWSDER 153
>gi|329923574|ref|ZP_08279036.1| ABC transporter, solute-binding protein [Paenibacillus sp. HGF5]
gi|328941217|gb|EGG37515.1| ABC transporter, solute-binding protein [Paenibacillus sp. HGF5]
Length = 566
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L L + ++ C KS ++ FG + + +++
Sbjct: 4 MSKTLALLLACFLVLAACSNT-TNNTPAAPEKSAESSEPADPFGRYEEPVQISISIEID 61
>gi|320577100|gb|ADW54059.1| outer membrane protein A [Sodalis glossinidius]
Length = 220
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + L+ + L + + L+ + + +TD IGT + N +SQ
Sbjct: 164 SDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRIGTEQYNQKLSQ 220
>gi|262039992|ref|ZP_06013257.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042660|gb|EEW43666.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 187
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 6/110 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ L+ + ++ C K L G+ L E
Sbjct: 1 MKKWLLAAAVC-VLTACSSGGESKTYYQLPVVQGGAQSAASQGARLLWVEQVSIPDYLAG 59
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
VV + D+ ++ L+++ L +A + + P V+
Sbjct: 60 NGVVYQTTDVQYVIANNNLWA---SPLDQQLRTTL--VANLSQQLPGWVV 104
>gi|251794813|ref|YP_003009544.1| extracellular solute-binding protein family 1 [Paenibacillus sp.
JDR-2]
gi|247542439|gb|ACS99457.1| extracellular solute-binding protein family 1 [Paenibacillus sp.
JDR-2]
Length = 485
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L +++ +M +S C + + +N++ N + D AE TG
Sbjct: 12 SLAIALVLMLVVSACSGGNNGNTTNVSNATNNSSGTNAATDNGSDNAEAP-ADNTASTGG 70
Query: 64 VVSRI 68
V
Sbjct: 71 TVEIT 75
>gi|331269977|ref|YP_004396469.1| hypothetical protein CbC4_1798 [Clostridium botulinum BKT015925]
gi|329126527|gb|AEB76472.1| hypothetical protein CbC4_1798 [Clostridium botulinum BKT015925]
Length = 207
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 18/149 (12%), Positives = 40/149 (26%), Gaps = 27/149 (18%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K +G+ + ++GC + E K+ ++L+K + +
Sbjct: 9 MKKMIGIMTICLLLMTGCSSSGSESVKITPS---------NLIENNLEKLKPHLSDMITG 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVS---------EVFLEKKFLPML-----QLIATILNKF 106
+ V G V + KF + + + K
Sbjct: 60 C-VKVEYSGKKKEIGCKYEVWENGKLTKGENIISASINDKFNGEVSVSLRDALNDNMQKS 118
Query: 107 PSTVIAI---QSHTDSIGTLKNNLLISQE 132
+ ++ + T S G +
Sbjct: 119 KNMIMTVAVTNGKTVSSGMKSIETFDREH 147
>gi|325270830|ref|ZP_08137420.1| hypothetical protein HMPREF9141_2630 [Prevotella multiformis DSM
16608]
gi|324986841|gb|EGC18834.1| hypothetical protein HMPREF9141_2630 [Prevotella multiformis DSM
16608]
Length = 304
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 9/106 (8%), Positives = 32/106 (30%), Gaps = 6/106 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L +++ ++ C + +++ + + ++ +Q
Sbjct: 1 MKKLLVMAVCGALALASCNQDKKSALNPAEIQNDSLRSIISARDNEINDMMGTLND-IQQ 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ + +T + + +Q IA + +
Sbjct: 60 GFTEINEAENRVTIAKDGE--RPDKAT---QVKENIQFIAQRMKEN 100
>gi|315650440|ref|ZP_07903511.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315487367|gb|EFU77678.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 235
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 37/123 (30%), Gaps = 19/123 (15%)
Query: 1 MIKE-----LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M K LGL+M SGCG K + ++ S KA + +
Sbjct: 1 MKKRFLITVLGLAMGSALVFSGCGSKKDTKD--------SSSATVEQSKDSTKKAAESSK 52
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF---LEKKFLPMLQLIATILNKFPSTVIA 112
+ G+ V D I ++ V + F + + Q + P +
Sbjct: 53 EETTTAGVKVDINYD-IANHLDDSYEDVGKAFGDPVSDEAKDGGQKVVKY--ANPERELH 109
Query: 113 IQS 115
Sbjct: 110 YYG 112
>gi|266620623|ref|ZP_06113558.1| putative bacterial extracellular solute-binding protein
[Clostridium hathewayi DSM 13479]
gi|288867762|gb|EFD00061.1| putative bacterial extracellular solute-binding protein
[Clostridium hathewayi DSM 13479]
Length = 450
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 40/129 (31%), Gaps = 24/129 (18%)
Query: 2 IKELGLSMFIMTTIS-------GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
+K+ G ++ +MT ++ GCG S+ +V + T+ + S+ +A
Sbjct: 1 MKKTGKAVALMTALAVTGALLGGCGADSK--TEVGQTGAAKTEAGSGTEDSAKTEAAGGD 58
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + I V F + + A + P I +
Sbjct: 59 AAE------------GTVKEDIRVVTYFAGSDAYAPVWKEVC---ADYMKDHPGITIVDE 103
Query: 115 SHTDSIGTL 123
S S
Sbjct: 104 SQPTSGSND 112
>gi|217324661|ref|ZP_03440745.1| putative lipoprotein [Escherichia coli O157:H7 str. TW14588]
gi|217320882|gb|EEC29306.1| putative lipoprotein [Escherichia coli O157:H7 str. TW14588]
Length = 245
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 54 MFKKILFPLVALFMLAGCARPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALA- 112
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 113 ---KVTRDNQIVTLTASRDLRF 131
>gi|209808883|ref|YP_002264421.1| N,N'-diacetylchitobiase precursor (chitobiase) [Aliivibrio
salmonicida LFI1238]
gi|208010445|emb|CAQ80804.1| N,N'-diacetylchitobiase precursor (chitobiase) [Aliivibrio
salmonicida LFI1238]
Length = 881
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 27/86 (31%), Gaps = 12/86 (13%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDT------DIVNKRFGSSLDKAEDEF 54
M K+ LS I+ ++ C + E+ V L N G + + EF
Sbjct: 1 MFKKTLLSTLILAGLAACSSTTPEQSTVNLLAENLDVNYTVITNQGADDGLACKDLQAEF 60
Query: 55 QM------QLQDTGIVVSRIGDMITC 74
L +TG V I
Sbjct: 61 ASCNKVNMTLTNTGAAVDSSDWTIYF 86
>gi|327474413|gb|EGF19819.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sanguinis SK408]
Length = 272
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 29/98 (29%), Gaps = 4/98 (4%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K +L + + C ++ + K+ + DK
Sbjct: 11 MKYSKLIFLAASVLVLGACSSGKDTTGDSSDKQAASSTSTVKKQDAEKDK-NSSQDTTTS 69
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPML 96
+ + + +VS+ + ++ K+ +L
Sbjct: 70 SDSTDTKKEQNHEAKTLDQNVSYNGSYYSVKGKYDEIL 107
>gi|327314489|ref|YP_004329926.1| putative lipoprotein [Prevotella denticola F0289]
gi|326945277|gb|AEA21162.1| putative lipoprotein [Prevotella denticola F0289]
Length = 304
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 9/109 (8%), Positives = 33/109 (30%), Gaps = 6/109 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L +++ + ++ C + +++ + + ++ +Q
Sbjct: 1 MKKLLIMAVCGVLALASCNQDKKSALNPAEIQNDSLRSIISARDNEINDMMGTLND-IQQ 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
++ + +T + + +Q IA + +
Sbjct: 60 GFAEINEAENRVTIAKDGE--RADKAT---QVKENIQFIAQRMKENRGL 103
>gi|316984017|gb|EFV62996.1| transferrin binding -like solute binding family protein
[Neisseria meningitidis H44/76]
Length = 493
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 18/63 (28%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 6 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAKEDAPQAGSQG 65
Query: 61 TGI 63
G
Sbjct: 66 QGA 68
>gi|59711590|ref|YP_204366.1| putative lipoprotein [Vibrio fischeri ES114]
gi|59479691|gb|AAW85478.1| lipoprotein, putative [Vibrio fischeri ES114]
Length = 120
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 20/49 (40%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK 49
M+K+ +++ ++ T++ C + + + +R LD
Sbjct: 1 MLKKTVITVSMLLTLAACSSSETPEPTKANATNPAATFCAERGTYDLDT 49
>gi|229174193|ref|ZP_04301728.1| VanW [Bacillus cereus MM3]
gi|228609314|gb|EEK66601.1| VanW [Bacillus cereus MM3]
Length = 303
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 22/169 (13%), Positives = 49/169 (28%), Gaps = 21/169 (12%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K + + + + +SGCG + + G +A+ E Q + +
Sbjct: 6 KGILVGVLCVAIVSGCGAKVSD------------VALVSDIGGHTVEAKAEVQDSI--SL 51
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ ++ + F E KF + +A+ + K +
Sbjct: 52 VDGRTGTEVKKLDLSSLGYFEDEA----KFKKSVTKVASEVGKSVDKKMVPSRVAPDGSW 107
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +++ L S+ + + K PI T G
Sbjct: 108 QEGKPAYELMEKELVDKLLNVGMWDSSYQLPIV---EKKPIATLSDAQG 153
>gi|229188810|ref|ZP_04315844.1| hypothetical protein bcere0002_5010 [Bacillus cereus ATCC 10876]
gi|228594623|gb|EEK52408.1| hypothetical protein bcere0002_5010 [Bacillus cereus ATCC 10876]
Length = 173
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 9/127 (7%), Positives = 35/127 (27%), Gaps = 10/127 (7%)
Query: 1 MIKELGLS-----MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--- 52
M+K + + ++ +SGC ++ +K +++ + ++ ++
Sbjct: 1 MMKRISSLFFSSLLALVLILSGCAGKEQKTEKQTGNQATSVEKISDNILDEMEGPPKNGH 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF--LEKKFLPMLQLIATILNKFPSTV 110
+ + + + ++ + I L
Sbjct: 61 TIERHVGKSEEDLKNRLKTDKVSAASTYYDKETATKAVKDSLKQHDKEIQDWLKNSKEAR 120
Query: 111 IAIQSHT 117
+ I +
Sbjct: 121 LVINTTH 127
>gi|81244333|gb|ABB65041.1| putative polymerase/proteinase [Shigella boydii Sb227]
Length = 226
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 35 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALA- 93
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 94 ---KVTRDNQIVTLAASRDLRF 112
>gi|10955226|ref|NP_044255.1| hypothetical protein R751p46 [Enterobacter aerogenes]
gi|1572563|gb|AAC64458.1| Upf30.5 [Enterobacter aerogenes]
Length = 142
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
V VSF F P + + + + + +I I T ++ + ++ R
Sbjct: 32 IKSGVSVSFPDSS---ATFQPTPEALELLADARNAAIIYISGRTSTLRPSAADEALALRR 88
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + S I V + + N T GR+ NQR++I++
Sbjct: 89 ALSA-RSYLVARGVSPLKIMVNFASAADFVADNSTAEGRRENQRVDIEVV 137
>gi|329961375|ref|ZP_08299498.1| hypothetical protein HMPREF9446_01065 [Bacteroides fluxus YIT
12057]
gi|328531852|gb|EGF58675.1| hypothetical protein HMPREF9446_01065 [Bacteroides fluxus YIT
12057]
Length = 182
Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 11/105 (10%), Positives = 33/105 (31%), Gaps = 6/105 (5%)
Query: 1 MIKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M+K + L+ + +S C S++ + + + T++ + D
Sbjct: 1 MMKNIVYMLACVSVLFLSACSSKSKDGSDMQVLMQDSTEVAGPQRMQVSDVKTTFTYKGK 60
Query: 59 QDTGIVVSRIGDMI-TCYIPVHVSFVSEV---FLEKKFLPMLQLI 99
+ VV + + + F+ + ++ +
Sbjct: 61 EYRSSVVRQPDESLPVVTDEQGGKFIDNRITLRIMSGGKQVVDKV 105
>gi|291521306|emb|CBK79599.1| Spermidine/putrescine-binding periplasmic protein [Coprococcus
catus GD/7]
Length = 372
Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Query: 1 MIKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L L+ ++ +++ CG ++ K + S +A +
Sbjct: 1 MKKRLLATVLAGAMVLSMAACGSSNANKTESAAASETANASTEAGAESGETQAAAQDGDA 60
Query: 58 LQD 60
+
Sbjct: 61 SSE 63
>gi|290508938|ref|ZP_06548309.1| sulfatase modifying factor 1 [Klebsiella sp. 1_1_55]
gi|289778332|gb|EFD86329.1| sulfatase modifying factor 1 [Klebsiella sp. 1_1_55]
Length = 296
Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 19/182 (10%), Positives = 46/182 (25%), Gaps = 10/182 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + ++ ++GC + + D + N + +F +
Sbjct: 1 MRKLIVVASVAAGLLTGCDQGNTTGSEKAAKALVDKSVSNMVPVQGGEFLMGDFGPLVGQ 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI-------AI 113
+ D + + +S+ + + + K P I +
Sbjct: 61 KLPFSIQQDDKTLHKVILSDFSISKYKVTNDDFNVYLKVTD--KKNPPVDILAKRHPSLL 118
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
+ + + Q I + + R P TN+ +
Sbjct: 119 KGDYPAGVIWQQAKDYCQWLGKKSGKK-IDLPTEAQWEFAARSRGQYLPFATNNGEFSPG 177
Query: 174 NN 175
N
Sbjct: 178 KN 179
>gi|218895414|ref|YP_002443825.1| putative lipoprotein [Bacillus cereus G9842]
gi|228899024|ref|ZP_04063297.1| CamS sex pheromone cAM373 [Bacillus thuringiensis IBL 4222]
gi|228963388|ref|ZP_04124549.1| CamS sex pheromone cAM373 [Bacillus thuringiensis serovar sotto
str. T04001]
gi|218544238|gb|ACK96632.1| putative lipoprotein [Bacillus cereus G9842]
gi|228796282|gb|EEM43729.1| CamS sex pheromone cAM373 [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228860599|gb|EEN04986.1| CamS sex pheromone cAM373 [Bacillus thuringiensis IBL 4222]
Length = 397
Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 36/112 (32%), Gaps = 17/112 (15%)
Query: 2 IKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K++ L++ + +SGC + + +KV + + D+
Sbjct: 1 MKKIALAVLSLGLLVSGCSAGADKDEKVSEKSGKAKEQSVVPKYAMSDEYYKTTIPFYGG 60
Query: 61 T--GIVVSRIGDMITCYIPV--------------HVSFVSEVFLEKKFLPML 96
G+VV + + + F LE +++ ML
Sbjct: 61 KARGLVVQGVNNRLDIDEFETGLMRIAKESFSTKDHFFKGGDTLEAQYVQML 112
>gi|152984100|ref|YP_001350776.1| hypothetical protein PSPA7_5452 [Pseudomonas aeruginosa PA7]
gi|150959258|gb|ABR81283.1| hypothetical protein PSPA7_5452 [Pseudomonas aeruginosa PA7]
Length = 1088
Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L +A L P+ + ++
Sbjct: 901 DLGTVPFAPGSDELSPEAQANLDKLAGALKDRPALRLEVEG 941
>gi|74317972|ref|YP_315712.1| hypothetical protein Tbd_1954 [Thiobacillus denitrificans ATCC
25259]
gi|74057467|gb|AAZ97907.1| hypothetical protein Tbd_1954 [Thiobacillus denitrificans ATCC
25259]
Length = 183
Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 6/39 (15%), Positives = 12/39 (30%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV 39
M K+L L++ ++GC +
Sbjct: 1 MNKKLTLTVAAALVLAGCASGVTRTPSAAVPLQQANAPA 39
>gi|56414399|ref|YP_151474.1| hypothetical protein SPA2277 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161353608|ref|NP_459441.2| hypothetical protein STM0445 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|197363319|ref|YP_002142956.1| hypothetical protein SSPA2119 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|238911423|ref|ZP_04655260.1| hypothetical protein SentesTe_09835 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|56128656|gb|AAV78162.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197094796|emb|CAR60329.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|267992158|gb|ACY87043.1| hypothetical protein STM14_0525 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|312911478|dbj|BAJ35452.1| hypothetical protein STMDT12_C05090 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
Length = 192
Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC D S+ A+ L
Sbjct: 1 MLKKLLFPLVALFMLAGCATPPTTIDVAPKITLPQQDPSLMGVTVSITGADQRQDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRNNQLVTLTASRDLRF 78
>gi|325282037|ref|YP_004254579.1| hypothetical protein Odosp_3447 [Odoribacter splanchnicus DSM
20712]
gi|324313846|gb|ADY34399.1| hypothetical protein Odosp_3447 [Odoribacter splanchnicus DSM
20712]
Length = 557
Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 14/134 (10%), Positives = 38/134 (28%), Gaps = 24/134 (17%)
Query: 2 IKELGLSMFIMTTISGCG-----LASREKKKVFLHKSNDTD---IVNKRFGSS-----LD 48
+K++ L + + + C +A + F + +TD ++ ++ + ++
Sbjct: 1 MKKILLFIPFIFLFAACSQDNEIIAENDDSTNFPKEQKETDGMMVLGEKLENPYSIANME 60
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP- 107
KA + + + L + L L +P
Sbjct: 61 KAYADLIKTRAAGDFKIETTDLYVR------FLPKDSTELLELQKDTLLE----LFDYPL 110
Query: 108 STVIAIQSHTDSIG 121
I ++
Sbjct: 111 DYDIEVEGTYYHDP 124
>gi|307261911|ref|ZP_07543571.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306868382|gb|EFN00199.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 339
Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLISQERA 134
+ + L+ L T + + I + +TD IG +NL +SQ RA
Sbjct: 245 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQRRA 304
Query: 135 DVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + +YL+ + + ++ G+ P+
Sbjct: 305 ETVANYLVSK-GQNPANVTAVGYGEANPV 332
>gi|255065960|ref|ZP_05317815.1| putrescine ABC transporter, periplasmic putrescine-binding
protein [Neisseria sicca ATCC 29256]
gi|255049871|gb|EET45335.1| putrescine ABC transporter, periplasmic putrescine-binding
protein [Neisseria sicca ATCC 29256]
Length = 381
Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 17/66 (25%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L L ++ CG + + N + + +D +
Sbjct: 6 MTKHLPLIALAAVMLAACGGSDKNTSDKAEQAGNQNVLRIYNWSEYVDPETVADFEKKNG 65
Query: 61 TGIVVS 66
+
Sbjct: 66 IKVTYD 71
>gi|226311601|ref|YP_002771495.1| ABC transporter substrate binding protein [Brevibacillus brevis
NBRC 100599]
gi|226094549|dbj|BAH42991.1| ABC transporter substrate binding protein [Brevibacillus brevis
NBRC 100599]
Length = 339
Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 51/124 (41%), Gaps = 7/124 (5%)
Query: 1 MIKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
++K LGL + +M +S CG + + ++ +K + + E +
Sbjct: 10 VMKGLGLGIMTGVMIMVSACGSTTTTQAPAKTEQTAAPAAESKPVTLTNNGIEMTYPKA- 68
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML----QLIATILNKFPSTVIAIQ 114
+ + +++ I + + V +L+ K LP L + + +K+P+ + +
Sbjct: 69 PERAVTLNQHVTEIMLALGLADKMVGTAYLDDKILPELKLEYDKVPVLSDKYPTKEVLLA 128
Query: 115 SHTD 118
++ D
Sbjct: 129 ANPD 132
>gi|222107884|gb|ACM44962.1| Gna2132 [Neisseria meningitidis]
Length = 419
Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 20/67 (29%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPAAPVVAEKETEVKEDAPQAGSQG 60
Query: 61 TGIVVSR 67
G ++
Sbjct: 61 QGAPSTQ 67
>gi|81239808|gb|ABB60518.1| putative polymerase/proteinase [Shigella dysenteriae Sd197]
Length = 226
Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 35 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRNDQALA- 93
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 94 ---KVTRDNQIVTLTASRDLRF 112
>gi|16759425|ref|NP_455042.1| hypothetical protein STY0487 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142803|ref|NP_806145.1| hypothetical protein t2415 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|162139609|ref|YP_215474.2| hypothetical protein SC0487 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|213425861|ref|ZP_03358611.1| hypothetical protein SentesTyphi_09514 [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|289826697|ref|ZP_06545671.1| hypothetical protein Salmonellentericaenterica_14657 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25372017|pir||AH0557 probable lipoprotein STY0487 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16501716|emb|CAD08904.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29138435|gb|AAO70005.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|322614723|gb|EFY11652.1| hypothetical protein SEEM315_18850 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322623536|gb|EFY20375.1| hypothetical protein SEEM973_06971 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322631886|gb|EFY28640.1| hypothetical protein SEEM201_08629 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637377|gb|EFY34079.1| hypothetical protein SEEM202_20014 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642062|gb|EFY38672.1| hypothetical protein SEEM954_02960 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647881|gb|EFY44356.1| hypothetical protein SEEM054_02037 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322652559|gb|EFY48913.1| hypothetical protein SEEM675_08121 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653279|gb|EFY49612.1| hypothetical protein SEEM965_18499 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660572|gb|EFY56808.1| hypothetical protein SEEM19N_20923 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664724|gb|EFY60917.1| hypothetical protein SEEM801_07417 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669223|gb|EFY65373.1| hypothetical protein SEEM507_00430 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322670768|gb|EFY66901.1| hypothetical protein SEEM877_06182 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678993|gb|EFY75048.1| hypothetical protein SEEM867_13175 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682021|gb|EFY78046.1| hypothetical protein SEEM180_17238 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322685150|gb|EFY81147.1| hypothetical protein SEEM600_21047 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322713518|gb|EFZ05089.1| Uncharacterized lipoprotein yajG [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323196961|gb|EFZ82103.1| hypothetical protein SEEM501_12786 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203946|gb|EFZ88963.1| hypothetical protein SEEM460_01105 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206969|gb|EFZ91922.1| hypothetical protein SEEM020_03454 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323214172|gb|EFZ98930.1| hypothetical protein SEEM6152_08062 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214504|gb|EFZ99255.1| hypothetical protein SEEM0077_17720 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323227010|gb|EGA11191.1| hypothetical protein SEEM0055_12807 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230172|gb|EGA14292.1| hypothetical protein SEEM0052_02202 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233910|gb|EGA17999.1| hypothetical protein SEEM3312_07858 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238396|gb|EGA22454.1| hypothetical protein SEEM5258_09052 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244084|gb|EGA28093.1| hypothetical protein SEEM1156_08980 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246244|gb|EGA30227.1| hypothetical protein SEEM9199_11193 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323251870|gb|EGA35733.1| hypothetical protein SEEM8282_13907 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257867|gb|EGA41546.1| hypothetical protein SEEM8283_03226 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323261120|gb|EGA44712.1| hypothetical protein SEEM8284_06232 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264950|gb|EGA48449.1| hypothetical protein SEEM8285_19684 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323272513|gb|EGA55920.1| hypothetical protein SEEM8287_14459 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 192
Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + ++GC D S+ A+ L
Sbjct: 1 MLKKLLFPLVALFMLAGCATPPTTIDVAPKITLPQQDPSLMGVTVSITGADQRQDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRNNQLVTLTASRDLRF 78
>gi|47565461|ref|ZP_00236502.1| axoneme-associated protein mst101(2), putative [Bacillus cereus
G9241]
gi|47557451|gb|EAL15778.1| axoneme-associated protein mst101(2), putative [Bacillus cereus
G9241]
Length = 291
Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 25/59 (42%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K+L + + ++ GC +++ K+ + + + A+++ ++Q
Sbjct: 1 MKKLMMIICLILLTVGCSSKEYDQQMGLGKKAMENGQYKEAVRYFENAAKEKSTDEIQQ 59
>gi|332094589|gb|EGI99635.1| hypothetical protein SB521682_0438 [Shigella boydii 5216-82]
Length = 192
Score = 37.7 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 1 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQIVTLTASRDLRF 78
>gi|325569606|ref|ZP_08145653.1| peptide ABC superfamily ATP binding cassette transporter
[Enterococcus casseliflavus ATCC 12755]
gi|325157162|gb|EGC69327.1| peptide ABC superfamily ATP binding cassette transporter
[Enterococcus casseliflavus ATCC 12755]
Length = 346
Score = 37.7 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 23/188 (12%), Positives = 51/188 (27%), Gaps = 20/188 (10%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+ +++ + CG ++ + TD S++ A +
Sbjct: 1 MKKTKFGMITLLAALVLGACGQSNEGGTDSTDTGESSTDAAASDI-STMPLAVVNDGEVM 59
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVF------------LEKKFLPMLQLIATILN-- 104
+ V+ + D + + L ++ A L+
Sbjct: 60 DGGTLDVAVVMDTQFQGLFQWEFYQDTYDNDFMLPSHEQLFLRDADFKIIDGGAADLDLD 119
Query: 105 -KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ I ++ + +VI N F +V G +Y
Sbjct: 120 IENNIATITLRDDLKWSDGEEVTAEDVIFSYEVIGHQDYTGIRYDNTFTNVVGM-EEYHN 178
Query: 164 DTNDTKVG 171
+DT G
Sbjct: 179 GDSDTISG 186
>gi|325139446|gb|EGC61986.1| periplasmic protein [Neisseria meningitidis CU385]
Length = 506
Score = 37.7 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 18/63 (28%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 19 MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAKEDAPQAGSQG 78
Query: 61 TGI 63
G
Sbjct: 79 QGA 81
>gi|324992809|gb|EGC24729.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sanguinis SK405]
gi|325695860|gb|EGD37751.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sanguinis SK160]
gi|327460246|gb|EGF06583.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sanguinis
SK1057]
gi|327462555|gb|EGF08879.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sanguinis SK1]
Length = 272
Score = 37.7 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 29/98 (29%), Gaps = 4/98 (4%)
Query: 2 IK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K +L + + C ++ + K+ + DK
Sbjct: 11 MKYSKLIFLAASVLVLGACSSGKDTTGDSSDKQAASSTSTVKKQDAEKDK-NSSQDTTTS 69
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPML 96
+ + + +VS+ + ++ K+ +L
Sbjct: 70 SDSTDTKKEQNHEAKTLDQNVSYNGSYYSVKGKYDEIL 107
>gi|304409698|ref|ZP_07391318.1| decaheme c-type cytochrome, OmcA/MtrC family [Shewanella baltica
OS183]
gi|307304054|ref|ZP_07583807.1| decaheme c-type cytochrome, OmcA/MtrC family [Shewanella baltica
BA175]
gi|304352216|gb|EFM16614.1| decaheme c-type cytochrome, OmcA/MtrC family [Shewanella baltica
OS183]
gi|306912952|gb|EFN43375.1| decaheme c-type cytochrome, OmcA/MtrC family [Shewanella baltica
BA175]
Length = 639
Score = 37.7 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 25/93 (26%), Gaps = 5/93 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + L + +++ +S CG + + + +DK +
Sbjct: 7 MSTQFSLMLALVSLLSACGGDKGQDGNPGEP-AKPPALTITSLNVMVDKV--AVTDGIAQ 63
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
VS D +P L +
Sbjct: 64 VDFQVSNQDDEAVIGVPSATFIA--AQLLPQGY 94
>gi|257469888|ref|ZP_05633980.1| dipeptide-binding protein [Fusobacterium ulcerans ATCC 49185]
Length = 508
Score = 37.7 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 4/80 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K+L + + I GC EKK + +V GS + ++
Sbjct: 1 MKKKLITILSLALFIFGCSSKDGEKKSNAPKE----KVVIVSQGSKPKSLDPNMYNEIPA 56
Query: 61 TGIVVSRIGDMITCYIPVHV 80
+ ++ +V
Sbjct: 57 LAVTEQIFNTLLRIDDKGNV 76
>gi|116006769|ref|YP_787953.1| hypothetical protein pBP136_p33 [Bordetella pertussis]
gi|115500076|dbj|BAF33472.1| Upf30.5 [Bordetella pertussis]
Length = 143
Score = 37.7 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
V VSF F P + + + + + +I I T ++ + ++ R
Sbjct: 33 IKSGVSVSFPDSS---ATFQPTPEALELLADARNAAIIYISGRTSTLRPSAADEALALRR 89
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + S I V + + N T GR+ NQR++I++
Sbjct: 90 ALSA-RSYLVARGVSPLKIMVNFASAADFVADNSTAEGRRENQRVDIEVV 138
>gi|326317114|ref|YP_004234786.1| hypothetical protein Acav_2307 [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323373950|gb|ADX46219.1| protein of unknown function DUF748 [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 1314
Score = 37.7 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 35/109 (32%), Gaps = 15/109 (13%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L+ L L +A L P+ + + H + + + + ++++
Sbjct: 1129 FAPGSAVLDAAALQGLDKVAQSLRDRPALQLTVTGHAVA--QAEEDGWKRERLRSQVQAW 1186
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN---------QRIEI 180
+R ++ V+G P T V + +R +I
Sbjct: 1187 QQRRQPAARADADVQG----APAAPGGTDVAQAQAYADALRELYRRADI 1231
>gi|228956799|ref|ZP_04118584.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228802840|gb|EEM49673.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 306
Score = 37.7 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 37/103 (35%), Gaps = 10/103 (9%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L +S+ + +S C S +KK ++T G ++ + +
Sbjct: 1 MKKLFISLTVLFVLVMSACSNGSTDKKNDAKGSKSETITYQTEDGKKIEVPANPKR---- 56
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIAT 101
+VV + V++ V +F L+ +A
Sbjct: 57 ---VVVLSSFAGNVMSLGVNLVGVDSWSKQNPRFDSKLKDVAE 96
>gi|224537398|ref|ZP_03677937.1| hypothetical protein BACCELL_02276 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521023|gb|EEF90128.1| hypothetical protein BACCELL_02276 [Bacteroides cellulosilyticus
DSM 14838]
Length = 494
Score = 37.7 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 37/135 (27%), Gaps = 6/135 (4%)
Query: 1 MIK-ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K + LS ++ +S C + V +N I N D+AE
Sbjct: 1 MMKINMILSCMLLWLVSACTSQEVVEITVSPEVTNAGYIGNGAEWDPYDEAEAWGASISD 60
Query: 60 DTGIVVSRIGD-----MITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + D I C I + + I+ +L I +
Sbjct: 61 KDWETLCKRLDFMKPQYIRCMINSPYRYYDSATGTYDKTRNIASISRLLRYCTERGITVM 120
Query: 115 SHTDSIGTLKNNLLI 129
+ T
Sbjct: 121 YGEYNPPTWDMKQDQ 135
>gi|123441885|ref|YP_001005868.1| putative lipoprotein protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088846|emb|CAL11652.1| putative lipoprotein protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 183
Score = 37.7 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 27/96 (28%), Gaps = 6/96 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K +++ +S C + S + L L
Sbjct: 1 MMKW--MAVIAALLLSACSSTPSKTYYQLPALSAPAGATSSVASRQLWVEHVGVADYLAA 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
G+ V + D+ ++ L+++ L
Sbjct: 59 AGV-VYQTNDVQYVIASNNLWA---SPLDQQLQQTL 90
>gi|58013365|gb|AAW63037.1| VcgE [Vibrio vulnificus]
gi|58013368|gb|AAW63038.1| VcgE [Vibrio vulnificus]
Length = 164
Score = 37.7 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 7/51 (13%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLH--KSNDTDIVNKRFGSSLDK 49
M K++ ++ F+ + GC S++ + + + K
Sbjct: 1 MYKKIAIAAFVSVALMGCQTTSKQAQTGTESGYGEMANAALMSAVQTWSQK 51
>gi|300773376|ref|ZP_07083245.1| major outer membrane protein OmpA [Sphingobacterium spiritivorum
ATCC 33861]
gi|300759547|gb|EFK56374.1| major outer membrane protein OmpA [Sphingobacterium spiritivorum
ATCC 33861]
Length = 394
Score = 37.7 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D + + + V + I + + + + L A ++ +
Sbjct: 262 DALSKQLEEAGNKSMTNV-IVNKNILAAPILVTFKIGSSEISNETRVNLGFFAKVIKEGD 320
Query: 108 STVI-AIQSHTD-SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
V+ I + D GT + N +S RA+ +K+ L+ R ++ +
Sbjct: 321 QQVVYRITGYADKGTGTSEINQRLSMARAEAVKNILVNEFAVPARQLATVAAGGVDNMYY 380
Query: 166 NDTKVGRQ 173
ND K+ R
Sbjct: 381 NDPKLSRA 388
>gi|7228716|gb|AAF42592.1|AF226443_1 putative lipoprotein GNA2132 [Neisseria meningitidis]
Length = 419
Score = 37.7 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 20/67 (29%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPAAPVVAEKETEVKEDAPQAGSQG 60
Query: 61 TGIVVSR 67
G ++
Sbjct: 61 QGAPSTQ 67
>gi|89896614|ref|YP_520101.1| hypothetical protein DSY3868 [Desulfitobacterium hafniense Y51]
gi|89336062|dbj|BAE85657.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 202
Score = 37.7 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 9/88 (10%), Positives = 24/88 (27%), Gaps = 7/88 (7%)
Query: 2 IKELGLSMF----IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+K++G+ + + ++GC + + + + E E
Sbjct: 1 MKKVGILVLGMVMALVLVTGCSQGAPAGGDKPAAGETAGTEPASKPEAPM---EPEASPA 57
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSE 85
G+ V + F +
Sbjct: 58 SAPEGVTVEEKDGLTIYTDLQKSPFENS 85
>gi|86143062|ref|ZP_01061484.1| LysM-repeat protein [Leeuwenhoekiella blandensis MED217]
gi|85830507|gb|EAQ48966.1| LysM-repeat protein [Leeuwenhoekiella blandensis MED217]
Length = 658
Score = 37.7 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 8/100 (8%), Positives = 25/100 (25%), Gaps = 6/100 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + + + + C +++ + +T + + +
Sbjct: 1 MKNITILFVFIFVVFSCSSIGQQQYASHQVREGETVSTIANKYNVTVYEIYRLNPEAKAK 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+ +P S L +L +A
Sbjct: 61 LYP------GLVLILPGGKSAPGGSELSADGKFVLHTVAK 94
>gi|329735035|gb|EGG71332.1| ABC transporter, substrate-binding protein [Staphylococcus
epidermidis VCU028]
Length = 315
Score = 37.7 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 27/103 (26%), Gaps = 12/103 (11%)
Query: 2 IKELGLSMFIMTTISGCGL---------ASREKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
+K+L + I+ +SGC + K KV+ + + G +D
Sbjct: 1 MKKLIIVSIIILMLSGCSSFDHRKRESINDKNKMKVYTTVYAFQSLTQQIGGKYVDTQSI 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ + S L+ +
Sbjct: 61 YPAGA---DLHSYEPTQKDMIDIAKSDLFVYSSHQLDPVAAKI 100
>gi|325479074|gb|EGC82174.1| D-methionine-binding lipoprotein MetQ [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 285
Score = 37.7 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 8/74 (10%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN------KRFGSSLDKAED 52
M K ++ L++ ++ S CG E K ++ D G + E
Sbjct: 1 MKKFAKIALALAVLVGFSACGAKDNESSKDASAETKTEDKAEGTTIKIGVVGEYNEVLEK 60
Query: 53 EFQMQLQDTGIVVS 66
+ + TG V
Sbjct: 61 VIERYEEATGNKVE 74
>gi|282875097|ref|ZP_06283970.1| periplasmic solute binding family protein [Staphylococcus
epidermidis SK135]
gi|281295862|gb|EFA88383.1| periplasmic solute binding family protein [Staphylococcus
epidermidis SK135]
Length = 191
Score = 37.7 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 27/103 (26%), Gaps = 12/103 (11%)
Query: 2 IKELGLSMFIMTTISGCGL---------ASREKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
+K+L + I+ +SGC + K KV+ + + G +D
Sbjct: 1 MKKLIIVSIIILMLSGCSSFDHRKRESINDKNKMKVYTTVYAFQSLTQQIGGKYVDTQSI 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ + S L+ +
Sbjct: 61 YPAGA---DLHSYEPTQKDMIDIAKSDLFVYSSHQLDPVAAKI 100
>gi|269138344|ref|YP_003295044.1| hypothetical protein ETAE_0988 [Edwardsiella tarda EIB202]
gi|267984004|gb|ACY83833.1| conserved hypothetical protein [Edwardsiella tarda EIB202]
gi|304558376|gb|ADM41040.1| Hypothetical lipoprotein yajG precursor [Edwardsiella tarda
FL6-60]
Length = 194
Score = 37.7 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ + + + ++GC S D + S++ A+ L
Sbjct: 3 MLKKFFIPLLALIALAGCASHSTTLNINPQMALPQQDPTLQGITISINGADMRQDKALA- 61
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G ++T + F
Sbjct: 62 ---KVNRDGQLVTLTAQRDLRF 80
>gi|157146950|ref|YP_001454269.1| hypothetical protein CKO_02727 [Citrobacter koseri ATCC BAA-895]
gi|157084155|gb|ABV13833.1| hypothetical protein CKO_02727 [Citrobacter koseri ATCC BAA-895]
Length = 192
Score = 37.7 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + + ++GC D S++ A+ L
Sbjct: 1 MLKKILFPLIALVMLAGCATPPTTIDVSPKITLPQQDPSLMGVTVSINGADQRQDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRNNQLVTLTASRDLRF 78
>gi|153000109|ref|YP_001365790.1| decaheme cytochrome c MtrF [Shewanella baltica OS185]
gi|151364727|gb|ABS07727.1| decaheme cytochrome c MtrF [Shewanella baltica OS185]
Length = 639
Score = 37.7 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 25/93 (26%), Gaps = 5/93 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + L + +++ +S CG + + + +DK +
Sbjct: 7 MSTQFSLMLALVSLLSACGGDKGQDGNPGEP-AKPPALTITSLKVMIDKV--AVADGIAQ 63
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
VS D IP L +
Sbjct: 64 VDFQVSNQDDEAVIGIPSATFIA--AQLLPQGY 94
>gi|109898891|ref|YP_662146.1| hypothetical protein Patl_2577 [Pseudoalteromonas atlantica T6c]
gi|109701172|gb|ABG41092.1| protein of unknown function DUF885 [Pseudoalteromonas atlantica
T6c]
Length = 630
Score = 37.7 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 16/57 (28%), Gaps = 1/57 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
MIK L + + +S C S ++ L N N Q
Sbjct: 1 MIKRLLIPFALSAVVSACS-TSHDQGASALQAPNAQQAQNVVNTQRNQAQLQTLVEQ 56
>gi|325859583|ref|ZP_08172716.1| putative lipoprotein [Prevotella denticola CRIS 18C-A]
gi|325482863|gb|EGC85863.1| putative lipoprotein [Prevotella denticola CRIS 18C-A]
Length = 304
Score = 37.7 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 9/106 (8%), Positives = 33/106 (31%), Gaps = 6/106 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L +++ + ++ C + +++ + + ++ +Q
Sbjct: 1 MKKLLIMAVCGVLALASCNQDKKSALNPAEIQNDSLRSIISARDNEINDMMGTLND-IQQ 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++ + +T + + +Q IA + +
Sbjct: 60 GFAEINEAENRVTIAKDGE--RADKAT---QVKENIQFIAQRMKEN 100
>gi|308050415|ref|YP_003913981.1| hypothetical protein Fbal_2705 [Ferrimonas balearica DSM 9799]
gi|307632605|gb|ADN76907.1| conserved hypothetical protein [Ferrimonas balearica DSM 9799]
Length = 191
Score = 37.7 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 7/38 (18%), Positives = 16/38 (42%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI 38
M+K+ +S+ + T++GC + +T
Sbjct: 1 MMKKRLISLLAVATLAGCASNDDVTLACTFPDAAETAA 38
>gi|308175004|ref|YP_003921709.1| methionine ABC transporter binding lipoprotein [Bacillus
amyloliquefaciens DSM 7]
gi|307607868|emb|CBI44239.1| methionine ABC transporter (binding lipoprotein) [Bacillus
amyloliquefaciens DSM 7]
gi|328554972|gb|AEB25464.1| methionine ABC transporter (binding lipoprotein) [Bacillus
amyloliquefaciens TA208]
gi|328913326|gb|AEB64922.1| methionine ABC transporter (binding lipoprotein) [Bacillus
amyloliquefaciens LL3]
Length = 271
Score = 37.7 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 12/128 (9%), Positives = 38/128 (29%), Gaps = 24/128 (18%)
Query: 2 IKELGLSMFIMTT---ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K++ LS ++ ++ CG KK++ + + L +AE + +
Sbjct: 1 MKKIVLSALLLVFAGVLAACGSNGSNKKEIVVAATKTPHA------EILKEAEPLLKEK- 53
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEV----FLEKKFLPMLQLIATILNKFPSTVIAIQ 114
G +T + ++ ++ + + + + + +
Sbjct: 54 ----------GYTLTVKVLNDYKMYNKALADKEVDANYFQHVPYLEQEMKENKDYKLVNA 103
Query: 115 SHTDSIGT 122
Sbjct: 104 GAVHLEPF 111
>gi|293608881|ref|ZP_06691184.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829454|gb|EFF87816.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 156
Score = 37.7 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA 50
M K L + ++ C E K +++ + +++D A
Sbjct: 1 MKKTLLSVALLSILLAACS--KNENKADTTTQASAPAQTTEANNNAVDTA 48
>gi|282915623|ref|ZP_06323394.1| hypothetical protein SATG_02344 [Staphylococcus aureus subsp.
aureus D139]
gi|282320439|gb|EFB50778.1| hypothetical protein SATG_02344 [Staphylococcus aureus subsp.
aureus D139]
Length = 107
Score = 37.7 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K + + + ++GC + +K + + +NK + + + + +
Sbjct: 1 MMKRILVVFLMLAIVLAGCSNKGEKYQKDIDKVYKEQNQMNKIASKVQNTIKTDIKQEDS 60
Query: 60 DTGIVVSRIGDMITCYIP 77
+T V + G +I I
Sbjct: 61 NTH--VYKDGKVIVIGIQ 76
>gi|110833119|ref|YP_691978.1| peptidyl-prolyl isomerase [Alcanivorax borkumensis SK2]
gi|110646230|emb|CAL15706.1| peptidylprolyl isomerase [Alcanivorax borkumensis SK2]
Length = 236
Score = 37.7 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 35/116 (30%), Gaps = 7/116 (6%)
Query: 2 IKELGLSMFIMTTISGCGL-----ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+K+LG+ + ++ CG + ++K + + + LD +
Sbjct: 1 MKKLGIVLAGTVLLAACGQDNAEVKTDDQKASYALGFRSAEQMRSLESLDLDAMVAGLRD 60
Query: 57 QLQDTGIV--VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+ + G D + + + LE+K ++ L
Sbjct: 61 GIDEKGESRLGDEDLDQLIRDFQGRMIAAQQEKLEEKAGENMEASEKFLADNAERE 116
>gi|323485550|ref|ZP_08090896.1| hypothetical protein HMPREF9474_02647 [Clostridium symbiosum
WAL-14163]
gi|323401198|gb|EGA93550.1| hypothetical protein HMPREF9474_02647 [Clostridium symbiosum
WAL-14163]
Length = 350
Score = 37.7 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 1 MIKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L LS+ + ++GC +++ + ++ + ++A +
Sbjct: 1 MKKRLLGVGLSILLAAGLAGCQTEGKKETQSAPAETASETAGAESAAEKTEEAAKTVDPK 60
>gi|283768034|ref|ZP_06340949.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus H19]
gi|283461913|gb|EFC08997.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus H19]
Length = 117
Score = 37.7 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K + + + ++GC + +K + + +NK + + + + +
Sbjct: 11 MMKRILVVFLMLAIVLAGCSNKGEKYQKDIDKVYKEQNQMNKIASKVQNTIKTDIKQEDS 70
Query: 60 DTGIVVSRIGDMITCYIP 77
+T V + G +I I
Sbjct: 71 NTH--VYKDGKVIVIGIQ 86
>gi|229845280|ref|ZP_04465412.1| hypothetical protein CGSHi6P18H1_01959 [Haemophilus influenzae
6P18H1]
gi|229811733|gb|EEP47430.1| hypothetical protein CGSHi6P18H1_01959 [Haemophilus influenzae
6P18H1]
Length = 389
Score = 37.7 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 9/93 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L + + GC S E + K + VN ++ E + + +
Sbjct: 1 MKKLFALILCAMAVVGCNDKSTESSQSNQPKQTEVSAVNT------EQKTSEIKAVIPEK 54
Query: 62 GIVV---SRIGDMITCYIPVHVSFVSEVFLEKK 91
I V + P+ + +
Sbjct: 55 YIDVPFSKTEKGRVIYKNPLDAFENGSDYNSED 87
>gi|229152741|ref|ZP_04280925.1| Periplasmic binding protein [Bacillus cereus m1550]
gi|228630719|gb|EEK87364.1| Periplasmic binding protein [Bacillus cereus m1550]
Length = 291
Score = 37.7 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIASVLMAIILLMSIAGCSSPKKESAKQVKSESKEHVVATTVAVTEIMDALEVDL 57
>gi|300776738|ref|ZP_07086596.1| conserved hypothetical protein [Chryseobacterium gleum ATCC
35910]
gi|300502248|gb|EFK33388.1| conserved hypothetical protein [Chryseobacterium gleum ATCC
35910]
Length = 213
Score = 37.7 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 20/59 (33%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K+L +++F+M+ I C + + + + E + +
Sbjct: 1 MKKLLIAVFVMSLIVACKKEAGKPVPNEIDSIAQNKTDGAGTTQTNVNKEAVLKQTNDE 59
>gi|56962874|ref|YP_174601.1| lipoprotein [Bacillus clausii KSM-K16]
gi|56909113|dbj|BAD63640.1| lipoprotein [Bacillus clausii KSM-K16]
Length = 201
Score = 37.7 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 47/150 (31%), Gaps = 2/150 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + +S FI+ ++ C S + +S E + +++ +
Sbjct: 1 MKRIVISFFIIFVLAACSQEETIDATEDDTPSTSDVEIPSTIFTSEKNNELIDEEEIKQS 60
Query: 62 -GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-STVIAIQSHTDS 119
+ + D+ P + L K L I ++ + + I ++T
Sbjct: 61 IKMYLDSSEDLYHASGPFEEIIDAGEQLTKHDLAAFNEINELIKENDENFSNYILNNTLP 120
Query: 120 IGTLKNNLLISQERADVIKSYLIQRGVSSN 149
G + ISQ + +N
Sbjct: 121 EGYQEEAERISQYMTASNQYLYELNDALNN 150
>gi|31795134|ref|NP_857992.1| putative outer membrane protein [uncultured bacterium]
gi|49176934|ref|YP_025437.1| hypothetical protein pJP4_73 [Ralstonia eutropha JMP134]
gi|72384319|ref|YP_293672.1| hypothetical protein Reut_D6517 [Ralstonia eutropha JMP134]
gi|77993246|ref|YP_358836.1| putative outer membrane protein [IncP-1beta multiresistance plasmid
pB8]
gi|84310702|ref|YP_447032.1| hypothetical protein pTP6_37 [uncultured bacterium]
gi|115345512|ref|YP_771697.1| hypothetical protein Bamb_6620 [Burkholderia ambifaria AMMD]
gi|121582564|ref|YP_974093.1| hypothetical protein Ajs_4259 [Acidovorax sp. JS42]
gi|319765131|ref|YP_004129067.1| hypothetical protein Alide_4488 [Alicycliphilus denitrificans BC]
gi|13661673|gb|AAK38017.1| Upf30.5 [Comamonas testosteroni]
gi|31746378|emb|CAD97503.1| putative outer membrane protein [uncultured bacterium]
gi|39777514|gb|AAR31089.1| Upf30.5 [Ralstonia eutropha JMP134]
gi|72123672|gb|AAZ65815.1| hypothetical protein Reut_D6517 [Ralstonia eutropha JMP134]
gi|77733999|emb|CAI10763.1| putative outer membrane protein [IncP-1beta multiresistance plasmid
pB8]
gi|84094982|emb|CAJ15604.1| Upf30.5 protein [uncultured bacterium]
gi|89211885|gb|ABD63300.1| Upf30.5 [Proteus mirabilis]
gi|89211891|gb|ABD63305.1| Upf30.5 [Bordetella bronchiseptica]
gi|115286689|gb|ABI92163.1| conserved hypothetical protein [Burkholderia ambifaria AMMD]
gi|120608620|gb|ABM44358.1| conserved hypothetical protein [Acidovorax sp. JS42]
gi|317119818|gb|ADV02305.1| hypothetical protein Alide_4488 [Alicycliphilus denitrificans BC]
Length = 143
Score = 37.7 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
V VSF F P + + + + + +I I T ++ + ++ R
Sbjct: 33 IKSGVSVSFPDSS---ATFQPTPEALELLADARNAAIIYISGRTSTLRPSAADEALALRR 89
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + S I V + + N T GR+ NQR++I++
Sbjct: 90 ALSA-RSYLVARGVSPLKIMVNFASAADFVADNSTAEGRRENQRVDIEVV 138
>gi|319943183|ref|ZP_08017466.1| glycerophosphodiester phosphodiesterase [Lautropia mirabilis ATCC
51599]
gi|319743725|gb|EFV96129.1| glycerophosphodiester phosphodiesterase [Lautropia mirabilis ATCC
51599]
Length = 465
Score = 37.7 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 5 LGLSMFIMTTISGCGLASREK--KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
+ +S+ + ++GC +S + + + T + + A + Q ++D
Sbjct: 22 VAISVASVLALAGCASSSGYQMDDQAARTGAGQTQAMASGASAGGQTAAESAQGAVEDGS 81
Query: 63 IV 64
Sbjct: 82 AQ 83
>gi|294498294|ref|YP_003561994.1| ferrichrome import ABC transporter ferrichrome-binding protein FhuD
[Bacillus megaterium QM B1551]
gi|294348231|gb|ADE68560.1| ferrichrome import ABC transporter, ferrichrome-binding protein
FhuD [Bacillus megaterium QM B1551]
Length = 306
Score = 37.7 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 38/115 (33%), Gaps = 10/115 (8%)
Query: 2 IKELGL--SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L L + + IS C S E K S I + + + +
Sbjct: 1 MKKLLLPFMLIFVLLISACSNGSTESKNDSSKNSESKTITYQSEDGPVKVPANPKR---- 56
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPMLQLIATILNKFPSTVIAI 113
+VV + V++ V + +F L+ + + + +I +
Sbjct: 57 ---VVVLGSYAGNVLSLGVNIVGVDSWSKMNPRFEKKLKGVEEVSEENLEKIIEL 108
>gi|291526469|emb|CBK92056.1| hypothetical protein EUR_31480 [Eubacterium rectale DSM 17629]
Length = 462
Score = 37.7 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 11/105 (10%)
Query: 1 MIKELGLSMFI----MTTISGCGLASRE-KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M K+L + T ++GCG S + +K K D + F D+A +
Sbjct: 1 MKKKLVTVLLASSMVATMLAGCGSGSGDGTEKGSSAKGGDGSVYMLNFKPETDQAWQDLA 60
Query: 56 MQ-LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ +TG+ V+ + + L KK P + I
Sbjct: 61 EKYTDETGVQVT-----VVTAADGQYKTTLKSELAKKDAPTIFNI 100
>gi|262375900|ref|ZP_06069131.1| predicted protein [Acinetobacter lwoffii SH145]
gi|262308994|gb|EEY90126.1| predicted protein [Acinetobacter lwoffii SH145]
Length = 388
Score = 37.7 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 25/91 (27%), Gaps = 7/91 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ L + + +S CG + + + V + G D
Sbjct: 1 MKKTLLCIALAGLLSACGGSDDN------ASTPPANNVGTQTGVLTDGIISGVTYITSSG 54
Query: 62 GIVVSRIGDMITCYIPVHV-SFVSEVFLEKK 91
V+ V F+ V L +
Sbjct: 55 ATGVTNEKGEFKFNDDEKVKFFIGGVQLGDE 85
>gi|329961964|ref|ZP_08299975.1| peptidase, M48 family [Bacteroides fluxus YIT 12057]
gi|328530612|gb|EGF57470.1| peptidase, M48 family [Bacteroides fluxus YIT 12057]
Length = 302
Score = 37.7 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GCG +K L S D +++ D + +
Sbjct: 40 MKKQIAVLTAFLLMLAGCGSVPVTGRKQILLVS-DQEVLTSSLTQYKDYIKSAPKSGSAT 98
Query: 61 TGIVVSRIGDMI 72
+V+R+G I
Sbjct: 99 QSAMVTRVGRRI 110
>gi|300703380|ref|YP_003744982.1| superoxide dismutase [Ralstonia solanacearum CFBP2957]
gi|299071043|emb|CBJ42352.1| Superoxide dismutase [Cu-Zn] [Ralstonia solanacearum CFBP2957]
Length = 182
Score = 37.7 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 5/49 (10%), Positives = 16/49 (32%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA 50
+K+L + + + ++GC + + + S +
Sbjct: 1 MKQLVIGLAAIGLMAGCASNAGTGASTGTPAAGMSASATLAPKSGSNAQ 49
>gi|282921735|ref|ZP_06329452.1| lipoprotein [Staphylococcus aureus A9765]
gi|282593997|gb|EFB98986.1| lipoprotein [Staphylococcus aureus A9765]
Length = 312
Score = 37.7 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K+ L + +SGC + E KK ++N + FQ +
Sbjct: 1 MFKKAKLILIATLLLSGCSAMNNESKKDTNTETNTETKSVPEEMEASKYVGQGFQPPAEK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
I + + F L+ K
Sbjct: 61 DAIEFVKKHRKEFEKVGEQ-FFKDNFGLKVKA 91
>gi|160878603|ref|YP_001557571.1| SCP-like extracellular [Clostridium phytofermentans ISDg]
gi|160427269|gb|ABX40832.1| SCP-like extracellular [Clostridium phytofermentans ISDg]
Length = 500
Score = 37.7 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 5/85 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K+L L + ++ CG K++ S+ + ++LD+ + ++
Sbjct: 1 MSKKLLLISVLALFLTACGNTKETSKEI----SDALQSKDAEIINNLDETNQQVTNSPEN 56
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSE 85
I D +T +P V
Sbjct: 57 QNIN-ESDNDKLTQNLPGENQDVPS 80
>gi|89100228|ref|ZP_01173095.1| possible D-amino acid dehydrogenase, large subunit [Bacillus sp.
NRRL B-14911]
gi|89085078|gb|EAR64212.1| possible D-amino acid dehydrogenase, large subunit [Bacillus sp.
NRRL B-14911]
Length = 469
Score = 37.7 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 33/113 (29%), Gaps = 8/113 (7%)
Query: 1 MIKEL----GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K+ +S ++T ++ C + K+ K + S D ++
Sbjct: 1 MGKKFWNIFVISTVMLTLLTACSDKQTDTKQD-DQKETSAMKEAEDNKDSTDSKDETSIE 59
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
++ + ++ + S L + L L + P
Sbjct: 60 EMLASLPEPTKTTVELANAEAGMFSGQDYDELTPEQQKELLKQ---LKELPEL 109
>gi|311031809|ref|ZP_07709899.1| hypothetical protein Bm3-1_14972 [Bacillus sp. m3-13]
Length = 214
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 37/134 (27%), Gaps = 11/134 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L I SGC ++KV + ++ ++ +D L
Sbjct: 1 MKRLFTLFLIGVLFSGCSNTDVYQEKVTELEEEIAEVYSQLEEKEMD------IETLSQQ 54
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
+ G+ I + + L I L K + + D G
Sbjct: 55 SAE-EKSGEFIMIPKDQVPRLWGDAD--AQLWDYL--IDDSLAKENGWEKGVTNWRDWDG 109
Query: 122 TLKNNLLISQERAD 135
L + + +
Sbjct: 110 EYDLALGSANQSWE 123
>gi|294853085|ref|ZP_06793757.1| predicted protein [Brucella sp. NVSL 07-0026]
gi|294818740|gb|EFG35740.1| predicted protein [Brucella sp. NVSL 07-0026]
Length = 78
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS----VRGFAYKYPIDTN 166
I ++ TD+ + +++ RA I ++LI +GV ++R V+ +A P+
Sbjct: 5 INVRGLTDNNCPPPGDTQVARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPLSP- 63
Query: 167 DTKVGRQNNQRIEIQIFPR 185
GR N+R++I+I +
Sbjct: 64 ----GRVLNRRVDIEILRK 78
>gi|225388140|ref|ZP_03757864.1| hypothetical protein CLOSTASPAR_01875 [Clostridium asparagiforme
DSM 15981]
gi|225045801|gb|EEG56047.1| hypothetical protein CLOSTASPAR_01875 [Clostridium asparagiforme
DSM 15981]
Length = 305
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 3/78 (3%)
Query: 1 MIKELGLSMFIMT--TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K+L L++ +S C A + + T +N S + + +
Sbjct: 1 MNKKLLLTLAFSFISLLSACASAPKAESP-AETAEIATIALNSSLDLSQEGRQPILPQEY 59
Query: 59 QDTGIVVSRIGDMITCYI 76
+ D + +
Sbjct: 60 DKPFVREILEKDSLVVGM 77
>gi|224372282|ref|YP_002606654.1| minor capsid protein [Nautilia profundicola AmH]
gi|223588848|gb|ACM92584.1| minor capsid protein [Nautilia profundicola AmH]
Length = 99
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 25/95 (26%), Gaps = 6/95 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K L M ++GC E + K D+ E L +
Sbjct: 1 MKNFLLMFIFMLFLAGCKSTKEE-----ITDLKTQVNSLKENVVYKDEFRLEI-DSLNEK 54
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ + D I + +V +L
Sbjct: 55 IEKLQKEVDNIKTKLDKVAFAKDKVKNNDNSKELL 89
>gi|116254345|ref|YP_770183.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258993|emb|CAK10102.1| putative transmembrane protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 86
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 5/46 (10%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS 46
M+K++ L ++ ++ C ++ + ++ +S
Sbjct: 1 MMKKIVLIGALVGALASCTAT----EQGTAIGAGTGAVIGGVVTNS 42
>gi|16077640|ref|NP_388454.1| lipoprotein [Bacillus subtilis subsp. subtilis str. 168]
gi|221308405|ref|ZP_03590252.1| hypothetical protein Bsubs1_03218 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312726|ref|ZP_03594531.1| hypothetical protein BsubsN3_03189 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317650|ref|ZP_03598944.1| hypothetical protein BsubsJ_03153 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321926|ref|ZP_03603220.1| hypothetical protein BsubsS_03224 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|32699860|sp|O05497|YDHF_BACSU RecName: Full=Uncharacterized protein ydhF; Flags: Precursor
gi|2632886|emb|CAB12392.1| putative lipoprotein [Bacillus subtilis subsp. subtilis str. 168]
Length = 236
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 8/89 (8%), Positives = 25/89 (28%), Gaps = 8/89 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++ + + ++GC + +K+ + K S +D ++
Sbjct: 1 MRRILSILVFAIMLAGCSSNASTEKQHA-----GGEKTVKAEPQSTSSQKDSTDDYQPNS 55
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ R + + L+
Sbjct: 56 QVTDDRTLHKVGQTFSDD---KGKAVLKD 81
>gi|328912328|gb|AEB63924.1| thermonuclease precursor [Bacillus amyloliquefaciens LL3]
Length = 327
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 14/123 (11%)
Query: 2 IKELGL---SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+ L ++ + +++ CG S K K+ T K + K E++ +
Sbjct: 1 MKKWLLGIGALSLSFSLAACGSDSASTDKSDSDKAKTTQQEEKSEKETTQKKENQSNNKS 60
Query: 59 QDTGIVVS-----------RIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
+ V ++ + ++ + +L P
Sbjct: 61 DGKNEKAEDASKKSSSDKKASDNKKKLVDVTLNRTVDGDTIKVNYKGEVKTVRYLLVDTP 120
Query: 108 STV 110
T
Sbjct: 121 ETK 123
>gi|322391090|ref|ZP_08064590.1| prophage superinfection immunity protein [Streptococcus
parasanguinis ATCC 903]
gi|321142215|gb|EFX37693.1| prophage superinfection immunity protein [Streptococcus
parasanguinis ATCC 903]
Length = 152
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 9/89 (10%), Positives = 25/89 (28%), Gaps = 2/89 (2%)
Query: 1 MIKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K L++ ++ C S KK ++ + ++ + +
Sbjct: 1 MKKVTTLAIIGLSAIALTACSSGSDSKKDAKASEAKTEQKASSSSEENVSTEFKNARKKA 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ V + + + F +
Sbjct: 61 ESYEKTVHLSKEGLKNQLTSFDQFPEDAA 89
>gi|313899522|ref|ZP_07833031.1| putative lipoprotein [Clostridium sp. HGF2]
gi|312955629|gb|EFR37288.1| putative lipoprotein [Clostridium sp. HGF2]
Length = 146
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 33/97 (34%), Gaps = 18/97 (18%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L + F + ++GC ++ + K ++ G +D ++ T
Sbjct: 1 MKKLLCAAFAVLVLAGCSGGAKTETKTC---------SMEQSGMKMDATFTAEDDKITKT 51
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
+ V + + + + + L L+
Sbjct: 52 SVKV---------TMDLSAAGLGDTELTDDQKKQLET 79
>gi|228951094|ref|ZP_04113212.1| hypothetical protein bthur0006_5230 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228808611|gb|EEM55112.1| hypothetical protein bthur0006_5230 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 173
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 9/127 (7%), Positives = 35/127 (27%), Gaps = 10/127 (7%)
Query: 1 MIKELGLS-----MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--- 52
M+K + + +M +SGC ++ +K +++ + ++ ++
Sbjct: 1 MMKRISSLFFSSLLALMLILSGCAGKEQKSEKQTGNQAASVEKISDNILDEMEGPPKNGH 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF--LEKKFLPMLQLIATILNKFPSTV 110
+ + + + ++ + I L
Sbjct: 61 TIERHVGKSEEDLKNRLKTDKVSAASTYYDKETATKAVKDSLKQHDKEIQDWLKNSKEAR 120
Query: 111 IAIQSHT 117
+ + +
Sbjct: 121 LVLNTTH 127
>gi|197104359|ref|YP_002129736.1| lysophospholipase [Phenylobacterium zucineum HLK1]
gi|196477779|gb|ACG77307.1| lysophospholipase [Phenylobacterium zucineum HLK1]
Length = 343
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 6/49 (12%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA 50
+K + L + +++ C + ++ + +S D A
Sbjct: 1 MKRIVLVLIAALSLAACSTMAVQR-PAEPPGGYRGPYIGADVVASFDGA 48
>gi|193076981|gb|ABO11719.2| hypothetical protein A1S_1291 [Acinetobacter baumannii ATCC 17978]
Length = 292
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 1 MIK-ELGLSMFIMTTISGCGLA--SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
MI+ L + + T++ C + + ++ + K N + K+ LDK + +
Sbjct: 1 MIRQNLAIILLSSITLTACAKSLNNTDEPQTQATKQNLSPEQQKKLQQLLDKTKKNLV-E 59
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ ++ G+ P + + S+ + L A
Sbjct: 60 IKGGTFMMGDFGEQ---KSPDKLPYDSDADSKPLHKVTLDNYA 99
>gi|150003674|ref|YP_001298418.1| hypothetical protein BVU_1105 [Bacteroides vulgatus ATCC 8482]
gi|149932098|gb|ABR38796.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 390
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 31/94 (32%), Gaps = 2/94 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L++ + C +E V + D + S+ + + Q+
Sbjct: 1 MKKIFLAVATALAMFSCS--QKEPVTVTITNPLPIDRNGEMVEISMAEITGKLQLPDTAQ 58
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
IV+ G + I + ++ +
Sbjct: 59 VIVLDENGLEVPYQITYDDMLIFPASVKGDASAV 92
>gi|149186455|ref|ZP_01864768.1| hypothetical protein ED21_23238 [Erythrobacter sp. SD-21]
gi|148830044|gb|EDL48482.1| hypothetical protein ED21_23238 [Erythrobacter sp. SD-21]
Length = 373
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 43/124 (34%), Gaps = 13/124 (10%)
Query: 2 IKELGLSMFIM--TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-------KAED 52
+K + L+ ++ CG S ++ + +++ + GS+ + +
Sbjct: 1 MKNILLASLAAPILALASCGDGSTKEANAAISQTDYPSDRSSPDGSANEDEFAANFTDRE 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+ + + S+ + +P +V + L + L I +L+K +
Sbjct: 61 GYDDEKSASQEEASQQDGRFSLTLPENV---TSSMLGDRSKK-LIAIQVMLDKSRHSPGV 116
Query: 113 IQSH 116
I
Sbjct: 117 IDGR 120
>gi|288575618|ref|ZP_05977326.2| putrescine ABC transporter, periplasmic putrescine-binding
protein [Neisseria mucosa ATCC 25996]
gi|288567355|gb|EFC88915.1| putrescine ABC transporter, periplasmic putrescine-binding
protein [Neisseria mucosa ATCC 25996]
Length = 381
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 17/66 (25%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L L ++ CG + + N + + +D +
Sbjct: 6 MTKHLPLIALAAVMLAACGGSDKNTSDKAGQAGNQNVLRIYNWSEYVDPETVADFEKKNG 65
Query: 61 TGIVVS 66
+
Sbjct: 66 IKVTYD 71
>gi|222107922|gb|ACM44981.1| Gna2132 [Neisseria meningitidis]
Length = 419
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 20/67 (29%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPTAPVVAEKETEAKEDAPQAGSQG 60
Query: 61 TGIVVSR 67
G ++
Sbjct: 61 QGAPSTQ 67
>gi|238895322|ref|YP_002920057.1| sulfatase modifying factor 1 precursor-like protein [Klebsiella
pneumoniae NTUH-K2044]
gi|238547639|dbj|BAH63990.1| sulfatase modifying factor 1 precursor-like protein [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
Length = 296
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 21/188 (11%), Positives = 50/188 (26%), Gaps = 22/188 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + ++ ++GC ++ + +V+K + + EF M
Sbjct: 1 MRKLIVVASVAAGLLTGC-----DQGNTTGSEKAAKALVDKSVSNMVPVQGGEFLMGDFG 55
Query: 61 TGI------VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI--- 111
+ + + + I +S+ + + + K P I
Sbjct: 56 PLVGEKLPFSIQQDDKNLHKVILSD-FSISKYKVTNDDFNVYLKVTD--KKNPPVDILAK 112
Query: 112 ----AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTND 167
++ + + Q I + + R P TN+
Sbjct: 113 RHPSLLKGDYPAGVIWQQAKDYCQWLGIKSGKK-IDLPTEAQWEFAARSRGQYLPFATNN 171
Query: 168 TKVGRQNN 175
+ N
Sbjct: 172 GEFSPGKN 179
>gi|226312338|ref|YP_002772232.1| ABC transporter substrate binding protein [Brevibacillus brevis
NBRC 100599]
gi|226095286|dbj|BAH43728.1| probable ABC transporter substrate binding protein [Brevibacillus
brevis NBRC 100599]
Length = 445
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 18/53 (33%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
+ +GL++ + ++ C S++ T K S + +
Sbjct: 7 LTSVGLTLLMTFALAACSSTSQQASTDTTPSQPSTPSAPKTEPSQPTAEKIKL 59
>gi|262379536|ref|ZP_06072692.1| conserved hypothetical protein [Acinetobacter radioresistens
SH164]
gi|262298993|gb|EEY86906.1| conserved hypothetical protein [Acinetobacter radioresistens
SH164]
Length = 119
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKV-----FLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M +++ +++F+ +I+ C +E + D ++ G LD+ ++
Sbjct: 3 MKEKILMTVFLSLSIAACQRQPQETDTAQPLNSSSPLAAQLDQAGEKIGKYLDQLDNPKT 62
Query: 56 MQ 57
Q
Sbjct: 63 SQ 64
>gi|255319744|ref|ZP_05360951.1| conserved hypothetical protein [Acinetobacter radioresistens
SK82]
gi|255303198|gb|EET82408.1| conserved hypothetical protein [Acinetobacter radioresistens
SK82]
Length = 117
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKV-----FLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M +++ +++F+ +I+ C +E + D ++ G LD+ ++
Sbjct: 1 MKEKILMTVFLSLSIAACQRQPQETDTAQPLNSSSPLAAQLDQAGEKIGKYLDQLDNPKT 60
Query: 56 MQ 57
Q
Sbjct: 61 SQ 62
>gi|319400207|gb|EFV88442.1| periplasmic solute binding family protein [Staphylococcus
epidermidis FRI909]
Length = 315
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 27/103 (26%), Gaps = 12/103 (11%)
Query: 2 IKELGLSMFIMTTISGCGL---------ASREKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
+K+L + I+ +SGC + K KV+ + + G +D
Sbjct: 1 MKKLIIVSIIILMLSGCSSFDHRKRESINDKNKMKVYTTVYAFQSLTQQIGGKYVDAQSI 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ + S L+ +
Sbjct: 61 YPAGA---DLHSYEPTQKDMINIAKSDLFVYSSHQLDPVAAKI 100
>gi|304410925|ref|ZP_07392542.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
baltica OS183]
gi|307304904|ref|ZP_07584654.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
baltica BA175]
gi|304350822|gb|EFM15223.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
baltica OS183]
gi|306912306|gb|EFN42730.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
baltica BA175]
Length = 826
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSN 34
+++ LGLS + ++GC S E
Sbjct: 4 VMRNLGLSALAVAVLAGCAATSTETAAPASSPQA 37
>gi|303240211|ref|ZP_07326731.1| nuclease (SNase domain protein) [Acetivibrio cellulolyticus CD2]
gi|302592302|gb|EFL62030.1| nuclease (SNase domain protein) [Acetivibrio cellulolyticus CD2]
Length = 199
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 27/79 (34%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M +L + + I+T IS C + K+ ++ D + + E+ L
Sbjct: 1 MKIKLFILVIIITLISACSNIVPQVKENSQVETKRYDKTENQITRTGSPEEEISDNNLVK 60
Query: 61 TGIVVSRIGDMITCYIPVH 79
+ GD + I
Sbjct: 61 ATVTRHVDGDTVYVKIAGK 79
>gi|293402319|ref|ZP_06646456.1| putative ABC transporter, periplasmic substrate-binding protein
[Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304166|gb|EFE45418.1| putative ABC transporter, periplasmic substrate-binding protein
[Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 333
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 6/92 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L + + ISGCG + E K IV +LD A++ F L+
Sbjct: 9 MKKLMGILAVCLLISGCGTKNEEAKPETAKTYKIG-IVQHMTHPALDSAKEGFTKYLKGK 67
Query: 62 GIVVS-----RIGDMITCYIPVHVSFVSEVFL 88
GI V +GD T I +V L
Sbjct: 68 GIQVEFVEKNALGDTATNDIITKQFVSDDVDL 99
>gi|217974850|ref|YP_002359601.1| peptidase S9 prolyl oligopeptidase active site domain-containing
protein [Shewanella baltica OS223]
gi|217499985|gb|ACK48178.1| peptidase S9 prolyl oligopeptidase active site domain protein
[Shewanella baltica OS223]
Length = 826
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSN 34
+++ LGLS + ++GC S E
Sbjct: 4 VMRNLGLSALAVAVLAGCAATSTETAAPASSPQA 37
>gi|153002263|ref|YP_001367944.1| peptidase S9 prolyl oligopeptidase [Shewanella baltica OS185]
gi|151366881|gb|ABS09881.1| peptidase S9 prolyl oligopeptidase active site domain protein
[Shewanella baltica OS185]
Length = 826
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSN 34
+++ LGLS + ++GC S E
Sbjct: 4 VMRNLGLSALAVAVLAGCAATSTETAAPASSPQA 37
>gi|160876987|ref|YP_001556303.1| peptidase S9 prolyl oligopeptidase [Shewanella baltica OS195]
gi|160862509|gb|ABX51043.1| peptidase S9 prolyl oligopeptidase active site domain protein
[Shewanella baltica OS195]
gi|315269190|gb|ADT96043.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
baltica OS678]
Length = 826
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSN 34
+++ LGLS + ++GC S E
Sbjct: 4 VMRNLGLSALAVAVLAGCAATSTETAAPASSPQA 37
>gi|42522786|ref|NP_968166.1| hypothetical protein Bd1261 [Bdellovibrio bacteriovorus HD100]
gi|39573982|emb|CAE79159.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
bacteriovorus HD100]
Length = 166
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 5/50 (10%), Positives = 14/50 (28%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
+K + L + +S C + + + ++ E
Sbjct: 13 MKSMCLLLGFCLLMSACATNQKSRLATTGIGIGVGAAIGAATAPEDERPE 62
>gi|126172817|ref|YP_001048966.1| peptidase S9 prolyl oligopeptidase [Shewanella baltica OS155]
gi|125996022|gb|ABN60097.1| peptidase S9, prolyl oligopeptidase active site domain protein
[Shewanella baltica OS155]
Length = 823
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSN 34
+++ LGLS + ++GC S E
Sbjct: 4 VMRNLGLSALAVAVLAGCAATSTETAAPASSPQA 37
>gi|311693114|gb|ADP95987.1| peptidylprolyl isomerase, FKBP-type [marine bacterium HP15]
Length = 238
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSND------TDIVNKRFGSSLDKAEDEFQ 55
+K+ L++ + ++GC ++ L ++ ++ +R G+ L + +
Sbjct: 1 MKKTLLALAVTGLVAGCSTPPEAPEQPKLDSTDQKVSYGMGLVLGERMGNDLPNLQMDQF 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+Q G ++ + L+++ ++ +A
Sbjct: 61 LQGIQHGHAGDEEAKRMSREEIQQALMTYQQQLQEEQGKQMEELAQ 106
>gi|197334996|ref|YP_002155759.1| lipoprotein, putative [Vibrio fischeri MJ11]
gi|197316486|gb|ACH65933.1| lipoprotein, putative [Vibrio fischeri MJ11]
Length = 120
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 6/46 (13%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS 46
M+K+ +++ ++ T++ C + + +N G+
Sbjct: 1 MLKKTVITISMLLTLAACSSSETPEPTKA-DATNPAATFCAERGTY 45
>gi|59714193|ref|YP_206968.1| beta-hexosaminidase [Vibrio fischeri ES114]
gi|59482441|gb|AAW88080.1| beta-hexosaminidase [Vibrio fischeri ES114]
Length = 886
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSN 34
M K+ LS I+ ++GC S E+ V N
Sbjct: 6 MFKKTLLSTLILAGLAGCSSTSSEQSAVNQLAEN 39
>gi|326790273|ref|YP_004308094.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM
5427]
gi|326541037|gb|ADZ82896.1| ABC-type transporter, periplasmic subunit [Clostridium
lentocellum DSM 5427]
Length = 333
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 5/98 (5%)
Query: 1 MIKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K+L L++ TI+GCG + + ++ + + + + E +
Sbjct: 1 MSKKLLLTLMTAAAITITGCGQTTTNEGTGAVNTEA--PVNTEASATPEEGQEATTVKVV 58
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEV-FLEKKFLPM 95
G + + + + + + LP+
Sbjct: 59 HALGETEAPKNPKNIVVLELGILDALDALEITPAGLPL 96
>gi|254362625|ref|ZP_04978714.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
PHL213]
gi|261492868|ref|ZP_05989414.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261496782|ref|ZP_05993157.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|153094239|gb|EDN75110.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
PHL213]
gi|261307621|gb|EEY08949.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261311409|gb|EEY12566.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 291
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 8/45 (17%), Positives = 15/45 (33%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS 45
M+K+ M +S C ++K K+ I +
Sbjct: 1 MMKKFIPVMIAALVLSACSSQPAKRKSTPRIKATAAYIPTENSAY 45
>gi|148978561|ref|ZP_01815013.1| putative lipoprotein [Vibrionales bacterium SWAT-3]
gi|145962350|gb|EDK27631.1| putative lipoprotein [Vibrionales bacterium SWAT-3]
Length = 242
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 42/136 (30%), Gaps = 21/136 (15%)
Query: 2 IKELGLS-MFIMTTISGCGLASR---EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+K L L+ + ++ ++GC + L+ + + + S+++K E
Sbjct: 1 MKHLTLAGLLAVSLLAGCSSTEEIVPDVPPSVLYSEAQESLQSGSWLSAIEKLEA----- 55
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-----STVIA 112
D+ + + + ++ L L I+ L P V+
Sbjct: 56 -LDSRYPFGAYSEQVQLDLIYAYYKNDDLALG------LATISRFLRLNPTHEKQDWVLY 108
Query: 113 IQSHTDSIGTLKNNLL 128
++ T
Sbjct: 109 MRGLTHMAQDRNFMHD 124
>gi|15676601|ref|NP_273745.1| competence lipoprotein [Neisseria meningitidis MC58]
gi|18203154|sp|Q9K0B1|COML_NEIMB RecName: Full=Competence lipoprotein ComL; Flags: Precursor
gi|7225932|gb|AAF41120.1| competence lipoprotein ComL [Neisseria meningitidis MC58]
gi|316983680|gb|EFV62661.1| competence lipoprotein comL [Neisseria meningitidis H44/76]
gi|325200612|gb|ADY96067.1| competence lipoprotein comL [Neisseria meningitidis H44/76]
Length = 267
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 36/116 (31%), Gaps = 6/116 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD---IVNKRFGSSLDKAEDEFQMQL 58
+K++ L++ + +S C K + + + + +S + ++
Sbjct: 1 MKKILLTVSLGLALSACATQGTVDKDAQITQDWSVEKLYAEAQDELNSSNYTRAVKLYEI 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ SR E + K L + + + P+ A+
Sbjct: 61 LESRFPTSRHAQQSQLDTAYAYYKDDE---KDKALAAIDRFRRLHPQHPNMDYALY 113
>gi|317492607|ref|ZP_07951034.1| curli production assembly/transport component CsgG
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919357|gb|EFV40689.1| curli production assembly/transport component CsgG
[Enterobacteriaceae bacterium 9_2_54FAA]
Length = 223
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 1 MIKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTD 37
M+K++ ++ + + T +SGC S +V S T
Sbjct: 1 MMKKILIATTLSLATFLSGCASESSRSLEVAKVASYGTQ 39
>gi|228919459|ref|ZP_04082823.1| hypothetical protein bthur0011_4840 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228840102|gb|EEM85379.1| hypothetical protein bthur0011_4840 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 173
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 9/127 (7%), Positives = 35/127 (27%), Gaps = 10/127 (7%)
Query: 1 MIKELGLS-----MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--- 52
M+K + + +M +SGC ++ +K +++ + ++ ++
Sbjct: 1 MMKRISSLFFSSLLALMLILSGCAGKEQKPEKQTGNQATSVEKISDNILDEMEGPPKNGH 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF--LEKKFLPMLQLIATILNKFPSTV 110
+ + + + ++ + I L
Sbjct: 61 TIERHVGKSEEDLKNRLKTDKVSAASTYYDKETATKAVKDSLKQHDKEIQDWLKNSKEAR 120
Query: 111 IAIQSHT 117
+ + +
Sbjct: 121 LVLNTTH 127
>gi|228987794|ref|ZP_04147904.1| Periplasmic binding protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228771952|gb|EEM20408.1| Periplasmic binding protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 291
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIASVLMAIILLVSIAGCSSPKKETAKQVKSESKERIVATTVAVTEIMDALEVDL 57
>gi|229105170|ref|ZP_04235821.1| Periplasmic binding protein [Bacillus cereus Rock3-28]
gi|228678351|gb|EEL32577.1| Periplasmic binding protein [Bacillus cereus Rock3-28]
Length = 291
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIASVLMAIILLMSIAGCSSPKKETAKQVKSESKERIVATTVAVTEIMDALEVDL 57
>gi|218461116|ref|ZP_03501207.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium
etli Kim 5]
Length = 41
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 6/41 (14%), Positives = 13/41 (31%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK 41
MIK+ L + +S C + + + +
Sbjct: 1 MIKKFILLAVAASYLSACTTTDPYTGEQKVSNTAGGAALGA 41
>gi|119488877|ref|ZP_01621839.1| Phosphonate-binding periplasmic protein [Lyngbya sp. PCC 8106]
gi|119455038|gb|EAW36180.1| Phosphonate-binding periplasmic protein [Lyngbya sp. PCC 8106]
Length = 303
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Query: 1 MIKELGL--SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
MIK+L + + M ++ C S + + + + + L + + L
Sbjct: 1 MIKKLFILGIIVSMLPLAACSSPSSQTSMQGIEEPLVISAIPDQDPEELQRKYQKLATYL 60
Query: 59 QDT-GIVVS 66
++ G+ V
Sbjct: 61 EEKLGVPVE 69
>gi|120404846|ref|YP_954675.1| hypothetical protein Mvan_3890 [Mycobacterium vanbaalenii PYR-1]
gi|119957664|gb|ABM14669.1| hypothetical protein Mvan_3890 [Mycobacterium vanbaalenii PYR-1]
Length = 154
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 28/106 (26%), Gaps = 10/106 (9%)
Query: 1 MIKELGLSM-FIMTTISGC---GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
++K++ L + + ++ C S E V + + E
Sbjct: 13 LMKQIALVVSALTLLLAACGGGSEQSPETVTVTSTTQAAPAYTPPAPVAPTKQQEVAPAP 72
Query: 57 QLQDT------GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
+ G + D I ++F + L L
Sbjct: 73 EASSWTMPNLIGRDLQAAQDAIQALTDYAIAFSTSTDLTGAARAQL 118
>gi|89097555|ref|ZP_01170444.1| hypothetical protein B14911_28190 [Bacillus sp. NRRL B-14911]
gi|89087851|gb|EAR66963.1| hypothetical protein B14911_28190 [Bacillus sp. NRRL B-14911]
Length = 146
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 30/102 (29%), Gaps = 1/102 (0%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED-EFQMQLQ 59
+ K L+ +SGCG ++ + + +K E ++
Sbjct: 4 VKKIYTLAAAAAIVLSGCGAEDDQETVSDEQNTTEGYNEQTNTEGEEEKLSAGELDDRIT 63
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+ + ++ + + F V L+ L I
Sbjct: 64 EGMDYGTYSAEVQSWAEKGQLEFKESVKLDGGEEGTLADIHQ 105
>gi|84386810|ref|ZP_00989835.1| hypothetical protein V12B01_19291 [Vibrio splendidus 12B01]
gi|84378338|gb|EAP95196.1| hypothetical protein V12B01_19291 [Vibrio splendidus 12B01]
Length = 560
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 11/129 (8%), Positives = 36/129 (27%), Gaps = 11/129 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE--FQMQL 58
M +L + T ++GC + + + ++ +
Sbjct: 1 MKLKLLSAAIAATFLAGCSSSGSSD-----NGTTPGPQTGVADVVYNEELHTAYIMGDEG 55
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ ++ G+ I + +V + ++ T++ + I +
Sbjct: 56 NNAVVIGDGEGNAIVTVNGEIFTIQGDVVVNANG----DIVGTVVTDNGVATVYINDKSY 111
Query: 119 SIGTLKNNL 127
++ L
Sbjct: 112 TLPVENGRL 120
>gi|330446993|ref|ZP_08310644.1| bamD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
gi|328491184|dbj|GAA05141.1| bamD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
Length = 242
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 43/137 (31%), Gaps = 21/137 (15%)
Query: 2 IKELGLS-MFIMTTISGCGLASR---EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+K L ++ + + +SGC + L+ + T + + + S++++ E
Sbjct: 1 MKRLTITTLLAVALLSGCSSKEEVIPDVPPSNLYATAQTALQSGNWTSAIEQLEA----- 55
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-----STVIA 112
D+ D + + ++ L + I L P V+
Sbjct: 56 -LDSRYPFGAYSDQVQLDLIYAYYKSDDLALGEA------TIERFLRLNPDHPQADWVVY 108
Query: 113 IQSHTDSIGTLKNNLLI 129
++ T +
Sbjct: 109 MRGLTHMAQDRSFMHDM 125
>gi|262280685|ref|ZP_06058468.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257585|gb|EEY76320.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 361
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+ L +S+ +SGC S++ + V + + +S + Q Q
Sbjct: 1 MMKKFLMMSVCSALLLSGCNKTSQQDQAVSKEQKTTEQKPVSKPDNSCIQINAAIQKINQ 60
Query: 60 DTGIV 64
++ I
Sbjct: 61 NSKIE 65
>gi|229158151|ref|ZP_04286219.1| Periplasmic binding protein [Bacillus cereus ATCC 4342]
gi|228625313|gb|EEK82072.1| Periplasmic binding protein [Bacillus cereus ATCC 4342]
Length = 291
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIASVLMAIILLVSIAGCSSPKKETAKQVKSESKERIVATTVAVTEIMDALEVDL 57
>gi|222107924|gb|ACM44982.1| Gna2132 [Neisseria meningitidis]
Length = 425
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 20/67 (29%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 1 MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPTAPVVAEKETEAKEDAPQAGSQG 60
Query: 61 TGIVVSR 67
G ++
Sbjct: 61 QGAPSTQ 67
>gi|154687382|ref|YP_001422543.1| YusA [Bacillus amyloliquefaciens FZB42]
gi|154353233|gb|ABS75312.1| YusA [Bacillus amyloliquefaciens FZB42]
Length = 271
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 11/128 (8%), Positives = 37/128 (28%), Gaps = 24/128 (18%)
Query: 2 IKELGLSMFIMTT---ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K++ LS ++ ++ CG KK++ + + L +AE + +
Sbjct: 1 MKKIVLSALLLVFAGVLAACGSNGSNKKEIVVAATKTPHA------EILKEAEPLLKEK- 53
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEV----FLEKKFLPMLQLIATILNKFPSTVIAIQ 114
G + + ++ ++ + + + + + +
Sbjct: 54 ----------GYTLKVKVLNDYKMYNKALADNEVDANYFQHVPYLEQEMKENKDYKLVNA 103
Query: 115 SHTDSIGT 122
Sbjct: 104 GAVHLEPF 111
>gi|88859229|ref|ZP_01133869.1| putative enzymatic protein [Pseudoalteromonas tunicata D2]
gi|88818246|gb|EAR28061.1| putative enzymatic protein [Pseudoalteromonas tunicata D2]
Length = 823
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 8/106 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MIK+ +++ I++T++ C +K + N G+ L + +
Sbjct: 1 MIKQSLIALAILSTLTACQTTVIQKDTKETTTIAPVIVNNTTSGAGL-----TLEQAMAH 55
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSE---VFLEKKFLPMLQLIATIL 103
V F + L F L + A L
Sbjct: 56 PDWFARSPERSFWSADSASVYFQQKQLGSELRDTFSRQLSITAQNL 101
>gi|325274010|ref|ZP_08140168.1| putative lipoprotein [Pseudomonas sp. TJI-51]
gi|324100863|gb|EGB98551.1| putative lipoprotein [Pseudomonas sp. TJI-51]
Length = 235
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 14/66 (21%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L ++ C A E+ + + L AED+
Sbjct: 7 RYLLVAAFSLFLAACSSAPVEQATAPAQADAWQQLQQNIASNELATAEDQLAALQAQAPD 66
Query: 64 VVSRIG 69
Sbjct: 67 DARLEQ 72
>gi|296282610|ref|ZP_06860608.1| beta-Ig-H3/fasciclin [Citromicrobium bathyomarinum JL354]
Length = 185
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 49/171 (28%), Gaps = 20/171 (11%)
Query: 1 MIKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M+K+ + + ++GCG A V + + + D + +
Sbjct: 1 MMKKTIIPALGALSLMLAGCGAADEAADPVESTATAGSQDLAATIAGIDDLSTAA--EVI 58
Query: 59 QDTGIVVSRIGDMITCY-IPVHVSFVSEVFLEKKFLPMLQ------LIATILNKFPSTVI 111
+ G+ G +P + +F L + L L+ + +L +
Sbjct: 59 GNAGLEDPFDGAGSYTAFLPSNAAF---AALPEGDLERLRSDEGRPEVIALLRGH----L 111
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP 162
A+ + + + + IQ + + G P
Sbjct: 112 AVGAISREDLDRALDQNGGSIELASVADEPIQVRKIDGQIL--VGDGDDAP 160
>gi|257875296|ref|ZP_05654949.1| peptide ABC transporter [Enterococcus casseliflavus EC20]
gi|257809462|gb|EEV38282.1| peptide ABC transporter [Enterococcus casseliflavus EC20]
Length = 597
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 8/89 (8%), Positives = 26/89 (29%), Gaps = 4/89 (4%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+ +++ + CG ++ + +D G+ + A +
Sbjct: 1 MKKTKFGMITLLAALVLGACGQSNEGGTGSTDTGESSSDAAASDIGT-MPLAVVNDGEVM 59
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ V+ + D + +
Sbjct: 60 DGGTLDVAVVMDTQFQGLFQWEFYQDTYD 88
>gi|255011004|ref|ZP_05283130.1| putative lipoprotein [Bacteroides fragilis 3_1_12]
gi|313148806|ref|ZP_07810999.1| predicted protein [Bacteroides fragilis 3_1_12]
gi|313137573|gb|EFR54933.1| predicted protein [Bacteroides fragilis 3_1_12]
Length = 291
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 1/86 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI-VNKRFGSSLDKAEDEFQMQLQ 59
M K + + +SGC + N T+I +N +A +
Sbjct: 1 MKKLMFAVIACAMALSGCSSEDDCTTVNPQPEENATEIKLNAGILGVATRAPVSTNDNIT 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSE 85
+ + + GD T V+FV+
Sbjct: 61 ASFVASTTDGDYTTNAWNSTVTFVAS 86
>gi|227871988|ref|ZP_03990374.1| NMT1/THI5 like domain protein [Oribacterium sinus F0268]
gi|227842164|gb|EEJ52408.1| NMT1/THI5 like domain protein [Oribacterium sinus F0268]
Length = 405
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 10/114 (8%), Positives = 31/114 (27%), Gaps = 25/114 (21%)
Query: 1 MIKELG------LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
M+K+ +++ + +++ C ++ + ++ ++ D E
Sbjct: 9 MMKKTLRQLGMAVALASVFSMTACSSQVGKQAETTKAENGTQAESQEKTEVEKDSTAQEA 68
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ GD + F + + + L P
Sbjct: 69 KQ------------GDGEQQTEEIKGGFSD----RPEAKDI---VYHPLKLTPE 103
>gi|319944506|ref|ZP_08018777.1| hypothetical protein HMPREF0551_1625 [Lautropia mirabilis ATCC
51599]
gi|319742219|gb|EFV94635.1| hypothetical protein HMPREF0551_1625 [Lautropia mirabilis ATCC
51599]
Length = 304
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 2/81 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE--FQMQLQ 59
K L LS+ IMT ++ CG + + K + E
Sbjct: 5 FKRLALSLSIMTLLAACGSHDGSGDAGASNAATTKSATTKAIAALPTALPPESLLTDNQA 64
Query: 60 DTGIVVSRIGDMITCYIPVHV 80
+ GD++ + +V
Sbjct: 65 EPISSTGIRGDVLATALTQNV 85
>gi|293572949|ref|ZP_06683896.1| lipoprotein, putative [Enterococcus faecium E980]
gi|291606990|gb|EFF36365.1| lipoprotein, putative [Enterococcus faecium E980]
Length = 195
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 31/96 (32%), Gaps = 13/96 (13%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKK-------------KVFLHKSNDTDIVNKRFGSSL 47
MIK+L L + ++GC + KV + D +R+ ++
Sbjct: 1 MIKKLFLLSTLTLAMAGCSTTDSATESTTETTEDTTEEVKVETITEAEVDEARERWAEAI 60
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+ +++ + + + Y V F
Sbjct: 61 ISIGKASEEGMEEATEKAEEVIETLYAYDEGAVLFK 96
>gi|266621990|ref|ZP_06114925.1| putative bacterial extracellular solute-binding protein
[Clostridium hathewayi DSM 13479]
gi|288866322|gb|EFC98620.1| putative bacterial extracellular solute-binding protein
[Clostridium hathewayi DSM 13479]
Length = 464
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 36/115 (31%), Gaps = 23/115 (20%)
Query: 1 MIKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K + L+ ++ +SGC + E K D + + E + +
Sbjct: 1 MMKRIAALVLTAAMIAAVSGCSAKTTETK----------DTSGAAVSTETKQEETAAKAE 50
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
G+ + ++S + L + ++ + P+ +
Sbjct: 51 AGQA------DGEKVKIS---YLSRYTNPEL-PRAKYYMEKLEEFRAANPNIEVE 95
>gi|269118807|ref|YP_003306984.1| hypothetical protein Sterm_0168 [Sebaldella termitidis ATCC
33386]
gi|268612685|gb|ACZ07053.1| hypothetical protein Sterm_0168 [Sebaldella termitidis ATCC
33386]
Length = 177
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ + + ++ + CG +K+ ++ +T N +DK + +++
Sbjct: 1 MKKFFIMLLMLLFVFSCGK----EKQPEKVEAKETVQENLFKNIDVDKLSRRLEKKIEVN 56
Query: 62 GIVVSRIGDMITCYIPVHVSFVS 84
G+ V D V + S
Sbjct: 57 GMKVDSFED---LNSDGKVFYYS 76
>gi|228960813|ref|ZP_04122449.1| Periplasmic binding protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228798868|gb|EEM45846.1| Periplasmic binding protein [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 291
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIASVLMAIILLMSIAGCSSPKKETAKQVKSESKERIVATTVAVTEIMDALEVDL 57
>gi|229099004|ref|ZP_04229939.1| Periplasmic binding protein [Bacillus cereus Rock3-29]
gi|229118035|ref|ZP_04247395.1| Periplasmic binding protein [Bacillus cereus Rock1-3]
gi|228665484|gb|EEL20966.1| Periplasmic binding protein [Bacillus cereus Rock1-3]
gi|228684502|gb|EEL38445.1| Periplasmic binding protein [Bacillus cereus Rock3-29]
Length = 291
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIASVLMAIILLMSIAGCSSPKKETAKQVKSESKERIVATTVAVTEIMDALEVDL 57
>gi|218887606|ref|YP_002436927.1| flagellar basal body L-ring protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|226701917|sp|B8DQY1|FLGH_DESVM RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|218758560|gb|ACL09459.1| flagellar L-ring protein [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 238
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 28/91 (30%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + L + M +SGC A ++ V + ++ E +
Sbjct: 1 MKRRLLAAGCAMLLLSGCNAARQQPSPVPPVTQPQAYAEPEDTAANPGSLYSESDSEFLF 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ R+GD++ + ++
Sbjct: 61 SDNRARRVGDIVLVKVVETDKAKNKADTTAD 91
>gi|169797481|ref|YP_001715274.1| hypothetical protein ABAYE3517 [Acinetobacter baumannii AYE]
gi|332851481|ref|ZP_08433478.1| hypothetical protein HMPREF0021_01050 [Acinetobacter baumannii
6013150]
gi|332866820|ref|ZP_08437224.1| hypothetical protein HMPREF0020_00831 [Acinetobacter baumannii
6013113]
gi|169150408|emb|CAM88305.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii AYE]
gi|332729934|gb|EGJ61265.1| hypothetical protein HMPREF0021_01050 [Acinetobacter baumannii
6013150]
gi|332734428|gb|EGJ65548.1| hypothetical protein HMPREF0020_00831 [Acinetobacter baumannii
6013113]
Length = 359
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 26/64 (40%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L +SM ++GC S++ + V + + ++ SS + Q+
Sbjct: 1 MKKILMMSMCSALLLAGCNKTSQQDQTVSKEQKSTAQKATEQRDSSCLQIMVAMHTINQN 60
Query: 61 TGIV 64
+ I
Sbjct: 61 SKIE 64
>gi|291483009|dbj|BAI84084.1| hypothetical protein BSNT_00987 [Bacillus subtilis subsp. natto
BEST195]
Length = 250
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 8/90 (8%), Positives = 25/90 (27%), Gaps = 8/90 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+++ + ++GC + +K+ + K S +D +
Sbjct: 14 IMRRILSIFVFAIMLAGCSSNASTEKQHA-----GGEKTVKAEPQSTSSQKDSTDDYQPN 68
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ + R + + L+
Sbjct: 69 SQVTDDRSLHKVGQTFSDD---KGKAVLKD 95
>gi|293391928|ref|ZP_06636262.1| membrane-bound lytic murein transglycosylase A [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952462|gb|EFE02581.1| membrane-bound lytic murein transglycosylase A [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 372
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 10/156 (6%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD----KAEDEFQMQLQDT 61
L++ + ++ C S + N DI ++FG+ + + ++ +
Sbjct: 11 FLTLSAIAVLTACSSNSNKPAAGQTTAQNTLDIDPQKFGAIYNGRTYQQSIFMPVRQVEN 70
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI-ATILNKFPSTVIAIQSHTDS- 119
V GD +T ++ L F P+ + A +L ++ +
Sbjct: 71 KSAVVNQGDFLTQLSNINNY---SAKLSSSFAPLYDKVTAWVLAGANTSELTNFGIQSQV 127
Query: 120 -IGTLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
G ++ + + N+ I
Sbjct: 128 MKGFDGYQNVLITGYYSPVIHARRTQQGKFNQPIYA 163
>gi|261417437|ref|YP_003251120.1| hypothetical protein Fisuc_3058 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373893|gb|ACX76638.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327827|gb|ADL27028.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 243
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 68/224 (30%), Gaps = 49/224 (21%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+ L ++ L + K+ + K + R + + F+ L
Sbjct: 25 MMSGLMFVFVLLII----ALVWQITKQDNIKKQAINKYQDTRDEIY-KELKSTFKDSLNV 79
Query: 61 TGIVVSR-----IGDMITCYIPVHVSFVSEVFLEKKFL-----------PMLQLIATILN 104
G + + I + + L ++ +L
Sbjct: 80 WGAELDSATLTVRFNEIALDGTPVLFASGDTLLPPRYKSMMKFFFPKYLEILD--GEKFR 137
Query: 105 KFPSTVIAIQSHTDSIGTLK----------NNLLISQERADVIKSYLIQRGVSSN----- 149
+ I I+ HTDS N+ +SQ R+ + Y + S
Sbjct: 138 EHIE-EIRIEGHTDSTPCYSLCKTLERNYLYNMNLSQARSRNVLRYGLTETDVSKDTTLL 196
Query: 150 ----RFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNIK 189
++I G ++ P T ++ ++R+EI++ + +
Sbjct: 197 EFARKYIIATGLSFSQPRAT------QEKSRRVEIRVRTKAQEQ 234
>gi|17547087|ref|NP_520489.1| superoxide dismutase Cu-Zn precursor protein [Ralstonia
solanacearum GMI1000]
gi|17429388|emb|CAD16075.1| probable superoxide dismutase cu-zn precursor protein [Ralstonia
solanacearum GMI1000]
Length = 182
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 5/49 (10%), Positives = 17/49 (34%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA 50
+K+L + + + ++GC + + + + S +
Sbjct: 1 MKQLVIGLAAIGLMAGCASNAGTGASTGAPAAGTSALATLAPKSGSNVQ 49
>gi|332969058|gb|EGK08097.1| amidohydrolase [Psychrobacter sp. 1501(2011)]
Length = 587
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 19/163 (11%), Positives = 52/163 (31%), Gaps = 7/163 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS--SLDKAEDEFQMQL 58
MIK++ ++ ++ ++GC + V + G+ ++ E L
Sbjct: 1 MIKKIIPTLVSLSLLAGCSSNTENTVSVEPKVTQVNKAHLYYNGNIIPMNTTEPSTVEAL 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ + +G++ F+ ++ + +L + V D
Sbjct: 61 VERKGRIVYVGNLAKAKDQ----FMDSEQIDLEGRTLLPGFIDA-HSHFGMVSNTMGQVD 115
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
N+ ++ +K+Y + + +I G+
Sbjct: 116 LNPPPVGNISSIEQMLSALKAYKAENNIPDGEWIYGWGYDESQ 158
>gi|94987185|ref|YP_595118.1| flagellar basal body L-ring protein [Lawsonia intracellularis
PHE/MN1-00]
gi|94731434|emb|CAJ54797.1| Flagellar basal body L-ring protein [Lawsonia intracellularis
PHE/MN1-00]
Length = 230
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 9/90 (10%), Positives = 28/90 (31%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L + + ++GC ++ + + S+ +
Sbjct: 1 MKKLLFTSGCILILTGCSAPNKTPVVAPPITPPPAYVEPEDSYSNPGSLYSSAESDGLFA 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
R+GD++ I + + ++
Sbjct: 61 DTRARRVGDIVMVKIVENNTAKNKADTTAD 90
>gi|15673703|ref|NP_267877.1| phosphate ABC transporter substrate binding protein [Lactococcus
lactis subsp. lactis Il1403]
gi|281492312|ref|YP_003354292.1| phosphate ABC transporter substrate-binding protein [Lactococcus
lactis subsp. lactis KF147]
gi|12724739|gb|AAK05819.1|AE006402_7 phosphate ABC transporter substrate binding protein [Lactococcus
lactis subsp. lactis Il1403]
gi|281375976|gb|ADA65467.1| Phosphate ABC transporter, substrate-binding protein [Lactococcus
lactis subsp. lactis KF147]
gi|326407187|gb|ADZ64258.1| phosphate ABC transporter substrate-binding protein [Lactococcus
lactis subsp. lactis CV56]
Length = 298
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 15/171 (8%), Positives = 49/171 (28%), Gaps = 17/171 (9%)
Query: 1 MIKELGLSMF---IMTTISGCGLASREKKKVFLHKSNDTD---IVNKRFGSSLDKAEDEF 54
M K++ + + + T++ CG ++ I +
Sbjct: 1 MKKKILVGLITAGALLTLAACGSSNGSSSSSSSSSDKALSGKIIAGGSTALQPLAQQSST 60
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHV---SFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ ++TG+ V+ G + + + + + A +
Sbjct: 61 EFMAKNTGVQVTVQGGGSGVGLTQVAAGSFQIGNSDIFAEEKSGIDASAIT-----DHKV 115
Query: 112 AIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSS---NRFISVRGFAY 159
A+ + + ++ ++ + + + ++ I+V G
Sbjct: 116 AVVGFAPIVNAKIDVKNLTSQQLQDVFTGKVTNWKDVGGSDQKITVIGRTE 166
>gi|309774826|ref|ZP_07669847.1| ABC-type dipeptide/oligopeptide/nickel transport system
[Erysipelotrichaceae bacterium 3_1_53]
gi|308917384|gb|EFP63103.1| ABC-type dipeptide/oligopeptide/nickel transport system
[Erysipelotrichaceae bacterium 3_1_53]
Length = 566
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 34/107 (31%), Gaps = 16/107 (14%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI------VNKRFGSSLDKAED 52
M K ++ + +++ CG +S++ + + T G +D +
Sbjct: 1 MKKLLKVMAAAACALSLTACGGSSKKGDTLVVGAEELTGTFSPLYYTGAYDGYVIDLVYN 60
Query: 53 EFQMQLQDTGI--------VVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ D + V++ G IT + V F K
Sbjct: 61 KLMEYDVDGNLQPSLAEKTDVAKDGKTITFNLRKGVKFSDGSDFTAK 107
>gi|227872731|ref|ZP_03991056.1| amino acid ABC superfamily ATP binding cassette transporter,
binding protein [Oribacterium sinus F0268]
gi|227841426|gb|EEJ51731.1| amino acid ABC superfamily ATP binding cassette transporter,
binding protein [Oribacterium sinus F0268]
Length = 286
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS-SLDKAEDEFQ 55
M K L ++ ++ CG + + T+ N+ GS D A+ E +
Sbjct: 11 MKKYLLIAALAGLSLVACGGSKGSTEGTAKGSEAGTEQGNQARGSKETDSAKAEAK 66
>gi|167751817|ref|ZP_02423944.1| hypothetical protein ALIPUT_00058 [Alistipes putredinis DSM 17216]
gi|167660058|gb|EDS04188.1| hypothetical protein ALIPUT_00058 [Alistipes putredinis DSM 17216]
Length = 591
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 8/112 (7%), Positives = 34/112 (30%), Gaps = 15/112 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED-------EF 54
+K+L L + + GC + ++ + + + +
Sbjct: 1 MKKLFLFAIAVLLVCGCTDSGIDETPYGGSDNTENPGDGNDSEDEKPDIPEYSINGSVQK 60
Query: 55 QMQLQDTGIVVSRIGDMITCY--------IPVHVSFVSEVFLEKKFLPMLQL 98
+Q + + + + + + + SF ++ +++ ++
Sbjct: 61 GQFIQGSVVTIQELNERLQPTGKSYQTQILDDMGSFELTSDIDSRYVEIIAE 112
>gi|157147717|ref|YP_001455037.1| hypothetical protein CKO_03520 [Citrobacter koseri ATCC BAA-895]
gi|291283977|ref|YP_003500795.1| hypothetical protein G2583_3290 [Escherichia coli O55:H7 str.
CB9615]
gi|157084922|gb|ABV14600.1| hypothetical protein CKO_03520 [Citrobacter koseri ATCC BAA-895]
gi|290763850|gb|ADD57811.1| hypothetical protein G2583_3290 [Escherichia coli O55:H7 str.
CB9615]
gi|320640633|gb|EFX10169.1| hypothetical protein ECO5101_20987 [Escherichia coli O157:H7 str.
G5101]
gi|320645999|gb|EFX14976.1| hypothetical protein ECO9389_20915 [Escherichia coli O157:H- str.
493-89]
gi|320651299|gb|EFX19730.1| hypothetical protein ECO2687_13015 [Escherichia coli O157:H- str.
H 2687]
gi|320662232|gb|EFX29629.1| hypothetical protein ECO5905_04222 [Escherichia coli O55:H7 str.
USDA 5905]
Length = 124
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK 41
+K++ + F+ T++GC + K +S T IV
Sbjct: 1 MKKIIIVGFVFLTLAGCSSVGNQSLKNETQESVKTKIVKG 40
>gi|12513293|gb|AAG54784.1|AE005222_9 hypothetical protein Z0537 [Escherichia coli O157:H7 str. EDL933]
gi|13359945|dbj|BAB33911.1| putative polymerase/proteinase [Escherichia coli O157:H7 str.
Sakai]
gi|209743884|gb|ACI70249.1| putative polymerase/proteinase [Escherichia coli]
gi|209743886|gb|ACI70250.1| putative polymerase/proteinase [Escherichia coli]
gi|209743888|gb|ACI70251.1| putative polymerase/proteinase [Escherichia coli]
gi|209743890|gb|ACI70252.1| putative polymerase/proteinase [Escherichia coli]
gi|209743892|gb|ACI70253.1| putative polymerase/proteinase [Escherichia coli]
Length = 226
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 35 MFKKILFPLVALFMLAGCARPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALA- 93
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 94 ---KVTRDNQIVTLTASRDLRF 112
>gi|331002733|ref|ZP_08326248.1| hypothetical protein HMPREF0491_01110 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330407146|gb|EGG86650.1| hypothetical protein HMPREF0491_01110 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 352
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 13/48 (27%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD 48
M K +S CGL S E N K S +
Sbjct: 1 MKKRFFALAIATLALSACGLKSPETTTTAAKADNAETTAAKADAGSAE 48
>gi|308173709|ref|YP_003920414.1| thermonuclease precursor [Bacillus amyloliquefaciens DSM 7]
gi|307606573|emb|CBI42944.1| thermonuclease precursor [Bacillus amyloliquefaciens DSM 7]
Length = 321
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 42/118 (35%), Gaps = 10/118 (8%)
Query: 2 IKELGL---SMFIMTTISGCGLASREKKKVFLHKSNDTDI------VNKRFGSSLDKAED 52
+K+ L ++ + +++ CG S K ++ T+ K S DK E
Sbjct: 1 MKKWLLGIGALSLSFSLAACGSDSASTDKTDSDQAKTTEQEEKDAKETKADTQSNDKNEK 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+D+ + + ++ + + ++ + ++ + +L P T
Sbjct: 61 AENASKKDSSDKKASDKKKKLVDVTLNRTVDGD-TIKVNYKGEVKTVRYLLVDTPETK 117
>gi|251793045|ref|YP_003007771.1| lipoprotein [Aggregatibacter aphrophilus NJ8700]
gi|247534438|gb|ACS97684.1| lipoprotein, putative [Aggregatibacter aphrophilus NJ8700]
Length = 182
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKS 33
+K+ LS + ++GC AS + + L
Sbjct: 1 MKKCLLSSMAILLLAGCASASGDTQGSALAGE 32
>gi|238926330|ref|ZP_04658090.1| ABC superfamily ATP binding cassette transporter, binding protein
[Selenomonas flueggei ATCC 43531]
gi|238885734|gb|EEQ49372.1| ABC superfamily ATP binding cassette transporter, binding protein
[Selenomonas flueggei ATCC 43531]
Length = 272
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 12/113 (10%), Positives = 38/113 (33%), Gaps = 7/113 (6%)
Query: 1 MIKELGLSMFI-MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L L + + ++GCG ++ K + + + + + + +L+
Sbjct: 1 MKKLLALVLAVTAFALAGCGGSA---DKPADNAKAEKVVKVGASPVPHAEILEAIRPELE 57
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
G+ + + + ++ ++ F + + + P +
Sbjct: 58 KEGVKLEIVEFNDYVQPNIA---TNDKEIDANFFQHEPYLKNFVEEHPELKLV 107
>gi|228935855|ref|ZP_04098667.1| Periplasmic binding protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228823912|gb|EEM69732.1| Periplasmic binding protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 291
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIASVLIAIILLVSIAGCSSPKKETAKQVKSESKERIVATTVAVTEIMDALEVDL 57
>gi|229134355|ref|ZP_04263168.1| VanW [Bacillus cereus BDRD-ST196]
gi|228648976|gb|EEL04998.1| VanW [Bacillus cereus BDRD-ST196]
Length = 303
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 47/170 (27%), Gaps = 21/170 (12%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK + + + + +SGCG + + +D + D D + T
Sbjct: 5 IKGILVGVLCVAVVSGCGTKVSDV-------ALVSDFGGNVVEAKADVQ-DSISLVDGRT 56
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G V + + F E KF + +A + K +
Sbjct: 57 GTEVKK------IDLSSLGYFEDEA----KFKKSVTKVAGEVGKSVDKKMVPSRIAPDGS 106
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +++ L S+ + + K P T G
Sbjct: 107 WQEGKPSFELMEKELVDKLLNVGMWDSSYQLPIV---EKKPTATLSDAQG 153
>gi|153833775|ref|ZP_01986442.1| membrane-fusion protein [Vibrio harveyi HY01]
gi|148869947|gb|EDL68910.1| membrane-fusion protein [Vibrio harveyi HY01]
Length = 316
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 28/88 (31%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K + L + +T ++ C ++ L + T ++ Q+ +
Sbjct: 1 MMKRIILGILALTLLTACSKDDGQQALGTLERDRVTFTATSSEIIRALPIKEGSQVTEGE 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFL 88
+ + V ++ +L
Sbjct: 61 VLVQLDTKNQEAVLAHAVAEQAKADAYL 88
>gi|194363784|ref|YP_002026394.1| peptidase M48 Ste24p [Stenotrophomonas maltophilia R551-3]
gi|194346588|gb|ACF49711.1| peptidase M48 Ste24p [Stenotrophomonas maltophilia R551-3]
Length = 268
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 23/59 (38%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K L L++ I T +S C + + + +++ + + + + ++
Sbjct: 1 MKHLLLALVITTLVSACATTTSPTGRRQMVGGVSQAQLDQLGAQAFAETKQKEKISTDG 59
>gi|302389242|ref|YP_003825063.1| putative transmembrane anti-sigma factor [Thermosediminibacter
oceani DSM 16646]
gi|302199870|gb|ADL07440.1| putative transmembrane anti-sigma factor [Thermosediminibacter
oceani DSM 16646]
Length = 284
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 22/61 (36%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + + ++GCG+ ++ + D N ++ +A E L
Sbjct: 1 MKKIFVVLLIAAFILAGCGVKPAQRSGANERAAPDYGQNNMIVQDAITQAHQESNKNLAG 60
Query: 61 T 61
T
Sbjct: 61 T 61
>gi|260494229|ref|ZP_05814360.1| acriflavin resistance periplasmic protein [Fusobacterium sp.
3_1_33]
gi|260198375|gb|EEW95891.1| acriflavin resistance periplasmic protein [Fusobacterium sp.
3_1_33]
Length = 369
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 19/51 (37%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
M K L + + + CG EKK+ ++ TD + + +
Sbjct: 1 MKKILTIFLAASLLLVACGKDKEEKKETTKQEAAVTDEQKSVKSVEVAEVK 51
>gi|184157314|ref|YP_001845653.1| small protein A [Acinetobacter baumannii ACICU]
gi|332876511|ref|ZP_08444276.1| OmpA family protein [Acinetobacter baumannii 6014059]
gi|183208908|gb|ACC56306.1| Small protein A (tmRNA-binding) [Acinetobacter baumannii ACICU]
gi|322507199|gb|ADX02653.1| small protein A (tmRNA-binding) [Acinetobacter baumannii 1656-2]
gi|323517176|gb|ADX91557.1| small protein A (tmRNA-binding) [Acinetobacter baumannii
TCDC-AB0715]
gi|332735280|gb|EGJ66342.1| OmpA family protein [Acinetobacter baumannii 6014059]
Length = 259
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ ++ + IA + K P+T I + TD +G N +S +RA+ +
Sbjct: 152 FERFDASAIEEGTNSVVKIAEQIKKSPTTTPIIVSGFTDPLGKFSYNQELSSKRANTVAK 211
Query: 140 YLIQRGVSSNRF-ISVRGFAY-KYPIDTNDTKV---GRQNNQRIEI 180
L+++GV +R I N++ N+R+ I
Sbjct: 212 LLVRQGVEPSRIQIQANSQTDLYKQCSDNNSSQLIQCLAPNRRVNI 257
>gi|167754714|ref|ZP_02426841.1| hypothetical protein CLORAM_00218 [Clostridium ramosum DSM 1402]
gi|167705546|gb|EDS20125.1| hypothetical protein CLORAM_00218 [Clostridium ramosum DSM 1402]
Length = 235
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 32/110 (29%), Gaps = 14/110 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD----KAEDEFQM 56
MIK+L + + + I+GC + + ++ + + S D + E
Sbjct: 1 MIKKLVVLLLMSFMITGCTKIPNTTTETSPVDNKESSKILIAYFSWADNTVVENEKASIE 60
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
+ D + + + IAT + +
Sbjct: 61 SALKHYESIGDQNDNVDATSSASILQPGN----------VGKIATWIQEN 100
>gi|126173825|ref|YP_001049974.1| decaheme cytochrome c MtrF [Shewanella baltica OS155]
gi|125997030|gb|ABN61105.1| decaheme cytochrome c MtrF [Shewanella baltica OS155]
Length = 639
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 26/93 (27%), Gaps = 5/93 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + L + +++ +S CG + + ++ +DK +
Sbjct: 7 MSTQFSLMLALVSLLSACGGDKGQDVNPGEP-AKPPALIITSLKVMVDKV--AITDGIAQ 63
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
VS D +P L +
Sbjct: 64 VDFQVSNQDDEAVIGVPSATFIA--AQLLPQGY 94
>gi|325577929|ref|ZP_08148162.1| lipoprotein spr [Haemophilus parainfluenzae ATCC 33392]
gi|325160359|gb|EGC72486.1| lipoprotein spr [Haemophilus parainfluenzae ATCC 33392]
Length = 183
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 22/49 (44%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK 49
M+K++ + + + + C S + + + +S+D ++ G K
Sbjct: 1 MLKKILIIVGLAVLTTACSNNSGQAQNGMISESDDAELTGLIAGLDGKK 49
>gi|238798694|ref|ZP_04642167.1| hypothetical protein ymoll0001_27050 [Yersinia mollaretii ATCC
43969]
gi|238717451|gb|EEQ09294.1| hypothetical protein ymoll0001_27050 [Yersinia mollaretii ATCC
43969]
Length = 223
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 1 MIKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTD 37
M+K++ L+ + +SGC S +V S T
Sbjct: 1 MMKKILLASALISAFLLSGCASESSRSLEVAKVASYGTQ 39
>gi|55418024|ref|YP_133924.1| putative outer membrane protein precursor [Plasmid pB3]
gi|54969578|emb|CAG26014.1| putative outer membrane protein precursor [Plasmid pB3]
gi|116874771|emb|CAJ98564.1| putative outer membrane protein precursor [uncultured bacterium]
Length = 143
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQER 133
V VSF F P + + + + + +I I T ++ + ++ R
Sbjct: 33 IKSGVSVSFPDSS---ATFQPTPEALELLADARNAAIIYISGRTSTLRPSAADEALALRR 89
Query: 134 ADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIF 183
A + S I V + + N T GR+ NQR++I++
Sbjct: 90 ALSA-RSYLVARGVSPLKIMVNFASAADFVADNSTAEGRRENQRVDIEVV 138
>gi|332687190|ref|YP_004456964.1| foldase protein PrsA , clustered with pyrimidine conversion
[Melissococcus plutonius ATCC 35311]
gi|332371199|dbj|BAK22155.1| foldase protein PrsA precursor, clustered with pyrimidine
conversion [Melissococcus plutonius ATCC 35311]
Length = 327
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 8/42 (19%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 1 MIKELGLS---MFIMTTISGCGLASREKKKVFLHKSNDTDIV 39
M K+L L+ +F + ++ C + + + + S T
Sbjct: 1 MKKKLVLAAAGVFSVFALAACSSSDKNEDIATMKGSTITVQD 42
>gi|319645090|ref|ZP_07999323.1| YqiH protein [Bacillus sp. BT1B_CT2]
gi|317392899|gb|EFV73693.1| YqiH protein [Bacillus sp. BT1B_CT2]
Length = 153
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 8/77 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + L +F M ++GCG D K G E F
Sbjct: 48 MRKGVILVLFAMLLLAGCGTTQHN--------GQSGDESRKGTGEETLVKEGTFVGLADQ 99
Query: 61 TGIVVSRIGDMITCYIP 77
+ V+ G +P
Sbjct: 100 HTVAVNIDGKETMFQVP 116
>gi|237717112|ref|ZP_04547593.1| quinonprotein alcohol dehydrogenase [Bacteroides sp. D1]
gi|237721908|ref|ZP_04552389.1| quinonprotein alcohol dehydrogenase [Bacteroides sp. 2_2_4]
gi|262405881|ref|ZP_06082431.1| quinoprotein alcohol dehydrogenase [Bacteroides sp. 2_1_22]
gi|293373788|ref|ZP_06620134.1| putative lipoprotein [Bacteroides ovatus SD CMC 3f]
gi|294647841|ref|ZP_06725393.1| putative lipoprotein [Bacteroides ovatus SD CC 2a]
gi|294806238|ref|ZP_06765085.1| putative lipoprotein [Bacteroides xylanisolvens SD CC 1b]
gi|229443095|gb|EEO48886.1| quinonprotein alcohol dehydrogenase [Bacteroides sp. D1]
gi|229448777|gb|EEO54568.1| quinonprotein alcohol dehydrogenase [Bacteroides sp. 2_2_4]
gi|262356756|gb|EEZ05846.1| quinoprotein alcohol dehydrogenase [Bacteroides sp. 2_1_22]
gi|292631278|gb|EFF49910.1| putative lipoprotein [Bacteroides ovatus SD CMC 3f]
gi|292636749|gb|EFF55215.1| putative lipoprotein [Bacteroides ovatus SD CC 2a]
gi|294446494|gb|EFG15114.1| putative lipoprotein [Bacteroides xylanisolvens SD CC 1b]
Length = 321
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 19/50 (38%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
+K++ L++ I+GC + + N V + +D +
Sbjct: 1 MKKILLAVTAALAITGCSQNEEFEAPSQKAEINFNTAVTRATELDIDGLK 50
>gi|329726549|gb|EGG63012.1| ABC transporter, substrate-binding protein [Staphylococcus
epidermidis VCU144]
gi|329734536|gb|EGG70847.1| ABC transporter, substrate-binding protein [Staphylococcus
epidermidis VCU045]
Length = 315
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 27/103 (26%), Gaps = 12/103 (11%)
Query: 2 IKELGLSMFIMTTISGCGL---------ASREKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
+K+L + I+ +SGC + K KV+ + + G +D
Sbjct: 1 MKKLIIVSIIILMLSGCSSFDHRKRESINDKNKMKVYTTVYAFQSLTQQIGGKYVDAQSI 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ + S L+ +
Sbjct: 61 YPAGA---DLHSYEPTQKDMIDIAKSDLFVYSSHQLDPVAAKI 100
>gi|327538824|gb|EGF25471.1| Major intrinsic protein [Rhodopirellula baltica WH47]
Length = 428
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 4/73 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF----GSSLDKAEDEFQM 56
M K++ + I CG S ++ L + ND V D+ E Q
Sbjct: 122 MAKKISAVVLFAFLIGACGSTSTAEEGSSLLRPNDRVAVIGGTFVERMQPRDELEAALQT 181
Query: 57 QLQDTGIVVSRIG 69
+ D + + +G
Sbjct: 182 KRPDWKLSIRNLG 194
>gi|257868616|ref|ZP_05648269.1| fumarate reductase flavoprotein subunit [Enterococcus gallinarum
EG2]
gi|257802780|gb|EEV31602.1| fumarate reductase flavoprotein subunit [Enterococcus gallinarum
EG2]
Length = 540
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 15/54 (27%), Gaps = 4/54 (7%)
Query: 2 IKELGLSMFIMTTISGC----GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
+K+L + + +S C E K S D +E
Sbjct: 40 LKKLVIGAASLLLLSACGSNGATKDSETAKSSASSSETEVASGASEQEYTDPSE 93
>gi|319425252|gb|ADV53326.1| conserved hypothetical protein [Shewanella putrefaciens 200]
Length = 105
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 6/105 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD--IVNKRFGSSLD-KAEDEFQMQL 58
+K+L + I ++S C ++ K S + V G ++ + E + Q+
Sbjct: 1 MKKLAVVSLICFSLSACSSLNKVKLDSQSVSSYIGEKVKVTTISGEQMEFQVESATEQQI 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ G +V + V + L L ML I +
Sbjct: 61 EGEGQLVKIED---IQTLEVEEFSPLKSILLSAGLYMLGAIIITI 102
>gi|227538027|ref|ZP_03968076.1| conserved hypothetical protein [Sphingobacterium spiritivorum
ATCC 33300]
gi|227242103|gb|EEI92118.1| conserved hypothetical protein [Sphingobacterium spiritivorum
ATCC 33300]
Length = 128
Score = 37.3 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 6/80 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MIK LGL +F + S C + I G+S + L D
Sbjct: 4 MIKILGLLVFTVVIFSACSKDDDPADNDIFVGKYNGKISYTDLGNSQN------NKPLAD 57
Query: 61 TGIVVSRIGDMITCYIPVHV 80
+ V ++G+ T Y +
Sbjct: 58 GTVTVQKLGNSYTFYFNNDI 77
>gi|225376304|ref|ZP_03753525.1| hypothetical protein ROSEINA2194_01942 [Roseburia inulinivorans
DSM 16841]
gi|225211950|gb|EEG94304.1| hypothetical protein ROSEINA2194_01942 [Roseburia inulinivorans
DSM 16841]
Length = 290
Score = 37.3 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Query: 1 MIKELGLSMFIMTT---ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+L + + ++ CG N++ +S + Q
Sbjct: 1 MMKKLTAVLLLTAMTAGLAACGSNKGADTNTDTPAQNESTEEAVTTETSGAAQNADIQGT 60
Query: 58 L 58
+
Sbjct: 61 I 61
>gi|114800038|ref|YP_761900.1| putative lipoprotein [Hyphomonas neptunium ATCC 15444]
gi|114740212|gb|ABI78337.1| putative lipoprotein [Hyphomonas neptunium ATCC 15444]
Length = 623
Score = 37.3 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 8/71 (11%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M++ ++ ++ + C + + + + ++++ + D +++ QLQ+
Sbjct: 1 MLRSAASALALVFVLGACAPETPQPAAPAEMTAEEQAAISEQLNAWFDT---KYEEQLQE 57
Query: 61 TGIVVSRIGDM 71
+ + +S +G
Sbjct: 58 SPVQLSFLGRK 68
>gi|225420394|ref|ZP_03762697.1| hypothetical protein CLOSTASPAR_06739 [Clostridium asparagiforme
DSM 15981]
gi|225040971|gb|EEG51217.1| hypothetical protein CLOSTASPAR_06739 [Clostridium asparagiforme
DSM 15981]
Length = 466
Score = 37.3 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 12/114 (10%), Positives = 30/114 (26%), Gaps = 20/114 (17%)
Query: 2 IKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K L ++ + +S C + K + D + + + + E
Sbjct: 5 MKRATALLIAAAMAVGLSACSSGGGGEAK-APSGTQTADSADSGTTAEPAEDKKEAAKTA 63
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
D + + L+++ + K P+ I
Sbjct: 64 SDEKVTIRFSWWGADTRHE----------------ATLKVMDMYMEKHPNVTIE 101
>gi|196230730|ref|ZP_03129591.1| hypothetical protein CfE428DRAFT_2756 [Chthoniobacter flavus
Ellin428]
gi|196225071|gb|EDY19580.1| hypothetical protein CfE428DRAFT_2756 [Chthoniobacter flavus
Ellin428]
Length = 326
Score = 37.3 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 100 ATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
A L P+ VI + + DS G K NL IS +RAD + L +G N +V G
Sbjct: 246 AQRLLSDPTAVIIVLGYADSKGDDKRNLQISIDRADGLVRALRDQGKILNVMHAV-GMGS 304
Query: 160 KYPIDTNDTKVGRQNNQRIEIQ-IFP 184
R N+ +EI + P
Sbjct: 305 SEMFGKGQ----RDKNRVVEIWAVLP 326
>gi|169349897|ref|ZP_02866835.1| hypothetical protein CLOSPI_00636 [Clostridium spiroforme DSM
1552]
gi|169293465|gb|EDS75598.1| hypothetical protein CLOSPI_00636 [Clostridium spiroforme DSM
1552]
Length = 171
Score = 37.3 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
+K++ + + ISGC AS K S +I ++ LD E
Sbjct: 1 MKKILSLILCVFLISGCSKASTNHIKKDSSLSGINEITYEQLQDKLDSDE 50
>gi|299066033|emb|CBJ37214.1| Superoxide dismutase [Cu-Zn] [Ralstonia solanacearum CMR15]
Length = 182
Score = 37.3 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 5/49 (10%), Positives = 17/49 (34%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA 50
+K+L + + + ++GC + + + + S +
Sbjct: 1 MKQLVIGLAAIGLMAGCASNAGTGASTGAPAAGTSALATLAPKSGSNVQ 49
>gi|293377551|ref|ZP_06623743.1| putative lipoprotein [Enterococcus faecium PC4.1]
gi|292643808|gb|EFF61926.1| putative lipoprotein [Enterococcus faecium PC4.1]
Length = 195
Score = 37.3 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN--KRFGSSLDKAEDEFQMQL 58
MIK+L L + ++GC + + T+ V + +D+A + + +
Sbjct: 1 MIKKLFLLSTLTLAMAGCSTTDSATESTTETTEDTTEEVKVETITEAEVDEARERWAEAI 60
Query: 59 QDTGIVVSRIGDMITCYIPVHV 80
G + T +
Sbjct: 61 ISIGTASEEGMEEATEKAEEVI 82
>gi|283956425|ref|ZP_06373905.1| membrane liproprotein MapA [Campylobacter jejuni subsp. jejuni
1336]
gi|283792145|gb|EFC30934.1| membrane liproprotein MapA [Campylobacter jejuni subsp. jejuni
1336]
Length = 214
Score = 37.3 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 15/165 (9%), Positives = 42/165 (25%), Gaps = 18/165 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K+ + + + +S C +V N S D E + + L
Sbjct: 1 MFKKFLIFIVPILFLSACATKQDTFAQVNQISRNSQCSSC----ESPDGFEAKIKGLLYI 56
Query: 61 TGIVVSRIGDMIT----CYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + + + T + L+ + +L + + +
Sbjct: 57 SDVGIQCCANKRTLDTGIALKKVYLHRF-YDLK-EGQKVLNA--------KGKKLFVDVN 106
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
+++ + V+ + S + +
Sbjct: 107 FNAVFYTYLKQELEARGIVVLDNNDQNSPYVSKIDLEFISYGATQ 151
>gi|262037186|ref|ZP_06010673.1| D-galactose-binding periplasmic protein [Leptotrichia
goodfellowii F0264]
gi|261748785|gb|EEY36137.1| D-galactose-binding periplasmic protein [Leptotrichia
goodfellowii F0264]
Length = 341
Score = 37.3 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI-VNKRFGSSLDKAEDEFQMQLQD 60
+K++ L M M + CG +E+ K + I + D + L+
Sbjct: 1 MKKILLVMLAMFMLLACGGEKKEEAKGGEPAKDGKKIKIGVTIYKYDDNFMATLRKDLEA 60
>gi|238784649|ref|ZP_04628654.1| hypothetical protein yberc0001_27930 [Yersinia bercovieri ATCC
43970]
gi|238714421|gb|EEQ06428.1| hypothetical protein yberc0001_27930 [Yersinia bercovieri ATCC
43970]
Length = 223
Score = 37.3 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 1 MIKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTD 37
M+K++ L+ + +SGC S +V S T
Sbjct: 1 MMKKIFLASTLITAFLLSGCASESSRSLEVAKVASYGTQ 39
>gi|29348468|ref|NP_811971.1| hypothetical protein BT_3059 [Bacteroides thetaiotaomicron
VPI-5482]
gi|253569165|ref|ZP_04846575.1| quinonprotein alcohol dehydrogenase [Bacteroides sp. 1_1_6]
gi|29340372|gb|AAO78165.1| Quinonprotein alcohol dehydrogenase [Bacteroides thetaiotaomicron
VPI-5482]
gi|251841184|gb|EES69265.1| quinonprotein alcohol dehydrogenase [Bacteroides sp. 1_1_6]
Length = 324
Score = 37.3 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 23/52 (44%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
+K++ L++ + TI+GC + + + N + V + + ++
Sbjct: 1 MKKILLAIAAVATITGCSQSEEFENPGQKAEINFSTAVTRATALDTEGLQNA 52
>gi|320140340|gb|EFW32196.1| hypothetical protein HMPREF9528_01321 [Staphylococcus aureus
subsp. aureus MRSA131]
Length = 312
Score = 37.3 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K+ L + +SGC + E KK ++N + FQ +
Sbjct: 1 MFKKAKLILIATLLLSGCSAMNNESKKDTNTETNTETKSVPEEMEASKYVGQGFQPPAEK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
I + + F L+ K
Sbjct: 61 DAIEFVKKHRKEFEKVGEQ-FFKDNFGLKVKA 91
>gi|302385630|ref|YP_003821452.1| extracellular solute-binding protein family 1 [Clostridium
saccharolyticum WM1]
gi|302196258|gb|ADL03829.1| extracellular solute-binding protein family 1 [Clostridium
saccharolyticum WM1]
Length = 459
Score = 37.3 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 23/178 (12%), Positives = 47/178 (26%), Gaps = 35/178 (19%)
Query: 2 IKELGL-SMFIMTTISGCG-LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
K + + +SGC E ++ T+ G++ D L
Sbjct: 3 KKRTAIWVLAAAAVLSGCSGKTVTEATTSANGETPKTEAAKADNGTTGDAVTISLVESLT 62
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN-KFPSTVIAIQSHTD 118
V +L+ IA + P+ I I S
Sbjct: 63 SPERTV-----------------------------VLREIADKYEAEHPNVKIDIVSPPL 93
Query: 119 SIGTLKNNLL---ISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQ 173
K + S ++ I + V++ ++ + +P T ++
Sbjct: 94 ENADAKITQMLMNGSGVDIVEVRDSTITQFVTNEWIADLQKYLDSWPEKDTLTDSAKE 151
>gi|170696066|ref|ZP_02887203.1| putative lipoprotein [Burkholderia graminis C4D1M]
gi|170139058|gb|EDT07249.1| putative lipoprotein [Burkholderia graminis C4D1M]
Length = 247
Score = 37.3 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 23/72 (31%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ K S+ + ++ C A K + L ++ + S D E + L
Sbjct: 14 LFKTTVASLCGLMLLAACSSAPTPKFQQELFETGASPYARNFNSSVTDTCEAARRALLSQ 73
Query: 61 TGIVVSRIGDMI 72
+ D +
Sbjct: 74 GYLTTMTRNDTV 85
>gi|117920060|ref|YP_869252.1| hypothetical protein Shewana3_1612 [Shewanella sp. ANA-3]
gi|117612392|gb|ABK47846.1| hypothetical protein Shewana3_1612 [Shewanella sp. ANA-3]
Length = 622
Score = 37.3 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 32/116 (27%), Gaps = 8/116 (6%)
Query: 2 IKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K +SM + ++ CG D + +L
Sbjct: 1 MKRTDFYISMLLALVLTACGGGDSSDNNGDNTTPPSASNTAPVISGLSDVYRMMERAELT 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK-FLPMLQLIATILNKFPSTVIAIQ 114
V GD IT + S + L L+ +N+ ST + +
Sbjct: 61 IPFSVTDAEGDTITLSV-----ISSNAAVTASLSGQKLLLVTADINQNTSTTVTLS 111
>gi|326410244|gb|ADZ67308.1| TraQ protein [Brucella melitensis M28]
gi|326553537|gb|ADZ88176.1| TraQ protein [Brucella melitensis M5-90]
Length = 78
Score = 37.3 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 111 IAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS----VRGFAYKYPIDTN 166
I ++ TD+ + +++ RA I ++LI +GV ++R V+ +A P+
Sbjct: 5 INVRGLTDNSCPPPGDTQVARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPLSP- 63
Query: 167 DTKVGRQNNQRIEIQIFPR 185
GR N+R++I+I +
Sbjct: 64 ----GRVLNRRVDIEILRK 78
>gi|325678537|ref|ZP_08158148.1| conserved domain protein [Ruminococcus albus 8]
gi|324109756|gb|EGC03961.1| conserved domain protein [Ruminococcus albus 8]
Length = 366
Score = 37.3 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 34/106 (32%), Gaps = 12/106 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ L + ++ + GCG+ ++ + + ++ +E +L
Sbjct: 1 MKKKIALMLALVMCLGGCGIEEIKESFSEKVDEKMEQHAAENTKYTQEQVCEEVYRELAA 60
Query: 61 TGIVVSRIG-----------DMITCYIPVHVSFVSEVFLEKKFLPM 95
VS G D + P V + + + +
Sbjct: 61 GSKKVSFDGVVSMDMVQYAVDHVRFDCPE-VFWTGNMTVSTDYKST 105
>gi|262407063|ref|ZP_06083612.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|262355766|gb|EEZ04857.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
Length = 279
Score = 37.3 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 28/94 (29%), Gaps = 3/94 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + ++ CG +K L +R K + + L
Sbjct: 1 MMKKLIILFCGTLALAACGNGLEKKANEKL---MVAKAAYERGDYEEAKLQIDSIKILYP 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
+ G + + + +L+ F
Sbjct: 58 KAFEARKAGQALMLDVETKTQQKTLAYLDSAFQA 91
>gi|83746727|ref|ZP_00943776.1| Superoxide dismutase (Cu-Zn) [Ralstonia solanacearum UW551]
gi|207742653|ref|YP_002259045.1| superoxide dismutase cu-zn precursor protein [Ralstonia
solanacearum IPO1609]
gi|83726680|gb|EAP73809.1| Superoxide dismutase (Cu-Zn) [Ralstonia solanacearum UW551]
gi|206594047|emb|CAQ60974.1| superoxide dismutase cu-zn precursor protein [Ralstonia
solanacearum IPO1609]
Length = 182
Score = 37.3 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 5/49 (10%), Positives = 16/49 (32%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA 50
+K+L + + + ++GC + + + S +
Sbjct: 1 MKQLVIGLAAIGLMAGCASNAGTGASTGAPAAGMSASATLAPKSGSNVQ 49
>gi|325143910|gb|EGC66220.1| competence lipoprotein comL [Neisseria meningitidis M01-240013]
gi|325206454|gb|ADZ01907.1| competence lipoprotein comL [Neisseria meningitidis M04-240196]
Length = 267
Score = 37.3 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 11/113 (9%), Positives = 35/113 (30%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L++ + +S C K + + + + L+ + ++L +
Sbjct: 1 MKKILLTVSLGLALSACATKGTVDKDAQITQDWSVEKLYAEAQDELNSSNYTRAVKLYEI 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + K L ++ + + P+ A+
Sbjct: 61 LESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALY 113
>gi|291527181|emb|CBK92767.1| Tetratricopeptide repeat [Eubacterium rectale M104/1]
Length = 320
Score = 37.3 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 5/69 (7%)
Query: 1 MIKELGLSM-----FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
MIK +++ ++GCG + K K + I N + ++D +
Sbjct: 1 MIKNKFMALTLTVVLTAGMLTGCGSGDKAKDKDAYRQYGINCIENGSYDDAVDAFQKALD 60
Query: 56 MQLQDTGIV 64
+ G
Sbjct: 61 QSVGSVGAE 69
>gi|241889154|ref|ZP_04776458.1| oligopeptide-binding protein OppA [Gemella haemolysans ATCC 10379]
gi|241864403|gb|EER68781.1| oligopeptide-binding protein OppA [Gemella haemolysans ATCC 10379]
Length = 600
Score = 37.3 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 24/181 (13%), Positives = 51/181 (28%), Gaps = 14/181 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K + +M + ++GC AS K T + N S + +
Sbjct: 6 MLKVVSSAMALTMLLAGCSSASNNSKGSKAAVEFKTAVDNGGNALSGQQLKIGITSADPL 65
Query: 61 TGI-----VVSRIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQ 114
TG+ + + + Y + L++ ++ K T+ +
Sbjct: 66 TGMFNPVFFLQTTDNDVMKYTMTGAFPTDDANRLKQDDKDAPVMLHVDREKKEVTLTIHK 125
Query: 115 SHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQN 174
S G I + + S+ + + G + G+
Sbjct: 126 DLKWSNGEDVKADDIVATYELMGNPKYTENVRYSDEYEVIEGMKDYH--------DGKAK 177
Query: 175 N 175
N
Sbjct: 178 N 178
>gi|126641083|ref|YP_001084067.1| putative antigen [Acinetobacter baumannii ATCC 17978]
Length = 174
Score = 37.3 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 6/106 (5%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTV-IAIQSHTDSIGTLKNNLLISQERADVIKS 139
+ ++ + IA + K P+ I + TD +G N +S +RA+ +
Sbjct: 67 FDRFDASAIEEGTNSVVKIAEQIKKSPTITPIIVSGFTDPLGKFSYNQELSSKRANTVAK 126
Query: 140 YLIQRGVSSNRF-ISVRGFAY-KYPIDTNDTKV---GRQNNQRIEI 180
L+Q+GV ++R I +N++ N+R+ I
Sbjct: 127 LLVQQGVDASRIQIQANSQTDIYKQCSSNNSSQLIQCLAPNRRVNI 172
>gi|313668891|ref|YP_004049175.1| polyamine permease substrate-binding protein [Neisseria lactamica
ST-640]
gi|313006353|emb|CBN87816.1| putative polyamine permease substrate-binding protein [Neisseria
lactamica 020-06]
Length = 379
Score = 37.3 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 30/114 (26%), Gaps = 5/114 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL-Q 59
M K L + + ++ CG S + K + D + E +
Sbjct: 1 MKKTLVAAAILSLALTACGGGSDTAAQAPSAKPEAGQSGKLNIYNWSDYVDPETVAAFEK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+TGI + V S L P + + + I
Sbjct: 61 ETGIKTRSDYYDSNETLEAKVLTGKSGYDLTA---PSIANVGRQIKAGAYQKID 111
>gi|296314699|ref|ZP_06864640.1| competence lipoprotein ComL [Neisseria polysaccharea ATCC 43768]
gi|296838533|gb|EFH22471.1| competence lipoprotein ComL [Neisseria polysaccharea ATCC 43768]
Length = 267
Score = 37.3 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 35/116 (30%), Gaps = 6/116 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD---IVNKRFGSSLDKAEDEFQMQL 58
+K+ L++ + +S C K + + + + +S + ++
Sbjct: 1 MKKFLLTVSLGLALSACATKGTVDKDAQITQDWSVEKLYAEAQDELNSSNYTRAVKLYEI 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
++ SR E + K L + + + P+ A+
Sbjct: 61 LESRFPTSRHAQQSQLDTAYAYYKDDE---KDKALAAIDRFRRLHPQHPNMDYALY 113
>gi|291546378|emb|CBL19486.1| trigger factor [Ruminococcus sp. SR1/5]
Length = 451
Score = 37.3 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 17/122 (13%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K+ + L++ I+ CG ++ +K + GS+ K +E
Sbjct: 1 MKKKAYLMVLALCAALAITACGTSTDQKDDKKPAAEAQDTTDKEDSGSADSKESEETDSN 60
Query: 58 LQDTG--------IVVSRIGDMITC------YIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ V + +T + V V++ ++ + LQ A +
Sbjct: 61 KDSEEAASGDTRLVSVDDVSKYVTIGEYKGLTLDNTVEAVTDDMVDGRIKEELQNKAEEV 120
Query: 104 NK 105
+
Sbjct: 121 TE 122
>gi|325265435|ref|ZP_08132158.1| putative lipoprotein [Clostridium sp. D5]
gi|324029293|gb|EGB90585.1| putative lipoprotein [Clostridium sp. D5]
Length = 141
Score = 37.3 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Query: 1 MIKEL--GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD 48
++K+L + + I+ +GC K ++ + + D
Sbjct: 2 IMKKLSFTILLVIIILFAGCSSTDDTPAKSDAQETAGESDESSDEKGNKD 51
>gi|261380334|ref|ZP_05984907.1| conserved hypothetical protein [Neisseria subflava NJ9703]
gi|284796851|gb|EFC52198.1| conserved hypothetical protein [Neisseria subflava NJ9703]
Length = 251
Score = 37.3 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 6/34 (17%), Positives = 13/34 (38%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSND 35
+K++ L + I T + C S+ +
Sbjct: 1 MKKIILLILISFTFTACSSTSKTPLSPEEKAEAE 34
>gi|225572316|ref|ZP_03781180.1| hypothetical protein RUMHYD_00610 [Blautia hydrogenotrophica DSM
10507]
gi|225040198|gb|EEG50444.1| hypothetical protein RUMHYD_00610 [Blautia hydrogenotrophica DSM
10507]
Length = 309
Score = 37.3 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 55/168 (32%), Gaps = 23/168 (13%)
Query: 2 IKELGLSMFIMTT-----ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+K+ L+M + T ++GCG + K++ + +++ + K +E
Sbjct: 1 MKKQALAMLLGTALVFGTLAGCGGSEESKEQPATEDAAESEDSQDAQKTDESKEGEEKGQ 60
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ T + G + Y+ + L + + + + + I +
Sbjct: 61 LMMATTTSTADTG--LLDYLAPIFQEDTGYELLWDAVGTGEAL--KMGENGDVDIVLV-- 114
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPID 164
+ S+E+ + + V N FI V P+
Sbjct: 115 ---------HAKASEEQFVADGYGVERFPVMYNDFIVV---GPTEPVA 150
>gi|209551390|ref|YP_002283307.1| 17 kDa surface antigen [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|241206832|ref|YP_002977928.1| 17 kDa surface antigen [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|209537146|gb|ACI57081.1| 17 kDa surface antigen [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|240860722|gb|ACS58389.1| 17 kDa surface antigen [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 85
Score = 37.3 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 5/46 (10%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS 46
M+K++ L ++ ++ C ++ + ++ +S
Sbjct: 1 MMKKIVLIGALVGALASCTAT----EQGTAIGAGTGAVIGGVVTNS 42
>gi|161509657|ref|YP_001575316.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|284024485|ref|ZP_06378883.1| lipoprotein [Staphylococcus aureus subsp. aureus 132]
gi|294848452|ref|ZP_06789198.1| lipoprotein [Staphylococcus aureus A9754]
gi|304380928|ref|ZP_07363587.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|62910567|gb|AAW36723.2| lipoprotein, putative [Staphylococcus aureus subsp. aureus COL]
gi|160368466|gb|ABX29437.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|269940979|emb|CBI49363.1| putative lipoprotein [Staphylococcus aureus subsp. aureus TW20]
gi|294824478|gb|EFG40901.1| lipoprotein [Staphylococcus aureus A9754]
gi|302751319|gb|ADL65496.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340514|gb|EFM06449.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|315197761|gb|EFU28095.1| lipoprotein [Staphylococcus aureus subsp. aureus CGS01]
gi|320142732|gb|EFW34535.1| hypothetical protein HMPREF9529_01832 [Staphylococcus aureus
subsp. aureus MRSA177]
gi|329314165|gb|AEB88578.1| Lipoprotein [Staphylococcus aureus subsp. aureus T0131]
Length = 312
Score = 37.3 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K+ L + +SGC + E KK ++N + FQ +
Sbjct: 1 MFKKAKLILIATLLLSGCSAMNNESKKDTNTETNTETKSVPEEMEASKYVGQGFQPPAEK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
I + + F L+ K
Sbjct: 61 DAIEFVKKHRKEFEKVGEQ-FFKDNFGLKVKA 91
>gi|89075040|ref|ZP_01161481.1| hypothetical protein SKA34_21630 [Photobacterium sp. SKA34]
gi|89049127|gb|EAR54692.1| hypothetical protein SKA34_21630 [Photobacterium sp. SKA34]
Length = 242
Score = 37.3 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 42/137 (30%), Gaps = 21/137 (15%)
Query: 2 IKELGLS-MFIMTTISGCGLASR---EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+K L ++ + + +SGC + L+ + T + + S++++ E
Sbjct: 1 MKRLTITTLLAVALLSGCSSKEDVIPDVPPSNLYATAQTALQKGNWTSAIEQLEA----- 55
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-----STVIA 112
D+ D + + ++ L + I L P V+
Sbjct: 56 -LDSRYPFGAYSDQVQLDLIYAYYKSDDLALGEA------TIERFLRLNPDHPQADWVVY 108
Query: 113 IQSHTDSIGTLKNNLLI 129
++ T +
Sbjct: 109 MRGLTHMAQDRSFMHDM 125
>gi|331002454|ref|ZP_08325972.1| hypothetical protein HMPREF0491_00834 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330410270|gb|EGG89704.1| hypothetical protein HMPREF0491_00834 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 274
Score = 37.3 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 18/47 (38%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL 47
M K L + ++GC AS + +++T I ++
Sbjct: 1 MKKIYLLGVLATIMLAGCSSASTDTSIAESKLTDETSIAGTDTNTTF 47
>gi|312881915|ref|ZP_07741678.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370433|gb|EFP97922.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 241
Score = 37.3 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 32/92 (34%), Gaps = 4/92 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHK---SNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L + +++ ++GC + + + + + + + +++ K E +
Sbjct: 1 MKKHLLSGLVVLSVLAGCSSSKDVVPDIPPSELYSDAQSSLQSGNWTNAIKKLE-ALDSR 59
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
D+I Y +S ++
Sbjct: 60 YPFGAYSEQVQLDLIYAYYKNDELALSSATID 91
>gi|304407927|ref|ZP_07389577.1| extracellular solute-binding protein family 1 [Paenibacillus
curdlanolyticus YK9]
gi|304342946|gb|EFM08790.1| extracellular solute-binding protein family 1 [Paenibacillus
curdlanolyticus YK9]
Length = 456
Score = 37.3 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 38/121 (31%), Gaps = 6/121 (4%)
Query: 1 MIKELGLSM--FIMTTISGCGLASREKKKV-FLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K + + + ++ ++ CG + K +S S+ +A
Sbjct: 3 MKKGILVMLVTALVFLLAACGTNGNDNNKSPGTSESASGSPDGSTSASNSPEAIPTGLKG 62
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIAT--ILNKFPSTVIAIQ 114
+ V GD + ++ E+ +++ P + + P V+ I
Sbjct: 63 DFEIQYFVGGYGDAWWKDVIDQFQKLNPELNIKQSAGPKINDQMKPRWIQGNPPDVVYID 122
Query: 115 S 115
Sbjct: 123 G 123
>gi|291526081|emb|CBK91668.1| Tetratricopeptide repeat [Eubacterium rectale DSM 17629]
Length = 320
Score = 37.3 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 5/69 (7%)
Query: 1 MIKELGLSM-----FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
MIK +++ ++GCG + K K + I N + ++D +
Sbjct: 1 MIKNKFMALTLTVVLTAGMLTGCGSGDKAKDKDAYRQYGINCIENGSYDDAVDAFQKALD 60
Query: 56 MQLQDTGIV 64
+ G
Sbjct: 61 QSVGSVGAE 69
>gi|254788442|ref|YP_003075871.1| thiol:disulfide interchange protein DsbA precursor
[Teredinibacter turnerae T7901]
gi|237686496|gb|ACR13760.1| thiol:disulfide interchange protein DsbA precursor
[Teredinibacter turnerae T7901]
Length = 236
Score = 37.3 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 9/74 (12%), Positives = 22/74 (29%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++ + + ++ + CG V + + G+ + E +
Sbjct: 1 MRHIAALIALVLFLGACGDKDASVASVTPSLIARAEAADSPAGNFVQVQYQEGREYTVLA 60
Query: 62 GIVVSRIGDMITCY 75
V + GD I
Sbjct: 61 EPVKTVSGDKIEVT 74
>gi|229141274|ref|ZP_04269812.1| Periplasmic binding protein [Bacillus cereus BDRD-ST26]
gi|228642055|gb|EEK98348.1| Periplasmic binding protein [Bacillus cereus BDRD-ST26]
Length = 291
Score = 37.3 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ + + ++ +I+GC +E K +S + + +D E E
Sbjct: 1 MKKIASVLMVIILLMSIAGCSSPKKETAKQVKSESKERIVATTVAVTEIMDALEVEL 57
>gi|205375135|ref|ZP_03227926.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
[Bacillus coahuilensis m4-4]
Length = 370
Score = 37.3 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 27/89 (30%), Gaps = 2/89 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M L + M +S C S+++ K T + ++ +A+ Q +
Sbjct: 1 MKNWLVAVVASMLVLSACASNSQKEPNNEETKEPITKTETPKQEDTMVEAQPNVQQIVNG 60
Query: 61 --TGIVVSRIGDMITCYIPVHVSFVSEVF 87
VV + + + +
Sbjct: 61 FYNNEVVKTEDEQNKEDVVKELEKYASSE 89
>gi|190572098|ref|YP_001969943.1| putative peptidase [Stenotrophomonas maltophilia K279a]
gi|190010020|emb|CAQ43625.1| putative peptidase [Stenotrophomonas maltophilia K279a]
Length = 268
Score = 37.3 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD--KAEDEFQMQLQ 59
+K+L L++ I T +S C + + + +++ + K +++ +
Sbjct: 1 MKQLLLALVITTLVSACATTTSPTGRRQMVGGVSQAQLDQLGAQAFAETKQKEKISTDGR 60
Query: 60 DTGIVVSRIGDMITCYIPVHV 80
G V + + + +P
Sbjct: 61 QNGY-VQCVVNALVAQLPAQY 80
>gi|170767809|ref|ZP_02902262.1| putative lipoprotein [Escherichia albertii TW07627]
gi|170123297|gb|EDS92228.1| putative lipoprotein [Escherichia albertii TW07627]
Length = 192
Score = 37.3 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC D S++ A+ L
Sbjct: 1 MFKKILFPLVALFMLAGCATPPTTIDVSPTMTLPQQDPSLMGVTVSINGADQRADQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRNNQIVTLTASRDLRF 78
>gi|120404007|ref|YP_953836.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium
vanbaalenii PYR-1]
gi|119956825|gb|ABM13830.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium
vanbaalenii PYR-1]
Length = 406
Score = 37.3 bits (85), Expect = 0.98, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
MI L + ++ ++ CG + + T D+ +D + +
Sbjct: 17 MITRALPIVFAMVLALTACGESVDTTQTTGSRNPAVTAPATTMAAEVTDRLDDAVERVMT 76
Query: 60 DTGIVVSRIG 69
+ GI + +G
Sbjct: 77 EAGIPGAIVG 86
>gi|260061283|ref|YP_003194363.1| hypothetical protein RB2501_06780 [Robiginitalea biformata
HTCC2501]
gi|88785415|gb|EAR16584.1| hypothetical protein RB2501_06780 [Robiginitalea biformata
HTCC2501]
Length = 337
Score = 37.3 bits (85), Expect = 0.98, Method: Composition-based stats.
Identities = 19/161 (11%), Positives = 42/161 (26%), Gaps = 12/161 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+++L + + S C ++K K + +T V D+ +
Sbjct: 1 MRKLVILIACAAVFSACDDTPKKKYKPGSIGALNTVAVVMPNAMWEGAVGDKVREHFAAP 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML---------QLIATILNKFPSTVIA 112
I ++ F +L + + L P V
Sbjct: 61 LIGLTWDEPRFNLEHMPPSVFTGTTRHR---RSVLYVSRDSVTGAQVQSDLYASPQMVGV 117
Query: 113 IQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFIS 153
++ +DS Q + + + R +S
Sbjct: 118 VKGTSDSAIMAAIETHAGQIIDSIRTMEMEEAQERFRRSLS 158
>gi|332981774|ref|YP_004463215.1| family 5 extracellular solute-binding protein [Mahella
australiensis 50-1 BON]
gi|332699452|gb|AEE96393.1| extracellular solute-binding protein family 5 [Mahella
australiensis 50-1 BON]
Length = 674
Score = 37.3 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 29/87 (33%), Gaps = 8/87 (9%)
Query: 2 IKELGL--------SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
+K+L L ++ + + GCG A+ E +K T + +
Sbjct: 1 MKKLRLFTVWILAFALLLSMVLVGCGTATTEDEKQPAETVEQTTDQGGEEAENKSEQTQG 60
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ ++ ++ + + + +
Sbjct: 61 TPTEFKEAPMLANMVKAGNLPSLKERL 87
>gi|326795019|ref|YP_004312839.1| peptidase M48 Ste24p [Marinomonas mediterranea MMB-1]
gi|326545783|gb|ADZ91003.1| peptidase M48 Ste24p [Marinomonas mediterranea MMB-1]
Length = 266
Score = 37.3 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK L L++ T IS C + +K+ L + + + + + + Q + +T
Sbjct: 4 IKALTLALAASTLISACSTSPTGRKQFVLLPDSKLNEMGVASFNQMKEEIPATQNE--ET 61
Query: 62 GIVVSRIGDMITCYIPVHV 80
V I D I +P
Sbjct: 62 SRSVQCIADRIIAVLPDQY 80
>gi|257868041|ref|ZP_05647694.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257874371|ref|ZP_05654024.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
gi|257802124|gb|EEV31027.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257808535|gb|EEV37357.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
Length = 170
Score = 37.3 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 1/93 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+ +L + ++ +S CG + E++ ++ +++ A D Q
Sbjct: 1 MLIKL-IPAVLLFLLSACGTSGTEERHALTASETSSEASQDHDQPTIESATDVVITVGQQ 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
IV + + ++ L
Sbjct: 60 DFIVKFYENEASEYLMNQMPFTLTMSDLNNNEK 92
>gi|251810480|ref|ZP_04824953.1| conserved hypothetical protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875463|ref|ZP_06284334.1| putative lipoprotein [Staphylococcus epidermidis SK135]
gi|251806084|gb|EES58741.1| conserved hypothetical protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295490|gb|EFA88013.1| putative lipoprotein [Staphylococcus epidermidis SK135]
gi|329732999|gb|EGG69340.1| putative lipoprotein [Staphylococcus epidermidis VCU028]
Length = 147
Score = 37.3 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 35/111 (31%), Gaps = 1/111 (0%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L L + ++ CG +K+K ++ D K + ED+ + +
Sbjct: 1 MKKVLFLIFASLLVLTACGQEEEKKEKDNKTETTKKD-EKKETQKKTENKEDKTKEDTDN 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ D + E + ++ A + + T I
Sbjct: 60 NDQQSNEQQDNQVNEQQQAQEQQANQQQEPSYEEQMRANAKVAKQNGYTGI 110
>gi|229916849|ref|YP_002885495.1| periplasmic binding protein [Exiguobacterium sp. AT1b]
gi|229468278|gb|ACQ70050.1| periplasmic binding protein [Exiguobacterium sp. AT1b]
Length = 333
Score = 37.3 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 37/121 (30%), Gaps = 13/121 (10%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG----------SSLDKAE 51
K + ++ ++ CG S KK+ + + T+ V + +
Sbjct: 4 FKISLMLTLLVFVLAACGGTSETKKEENVDGATKTETVEITDAHGTIEVPVNPEKVVALD 63
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ L I + + + S + F P L+ IA + P VI
Sbjct: 64 NRTFETLAAWDIDLVAAPIGLLPAESPYASDKDIADVGMHFEPNLEAIAGV---DPDVVI 120
Query: 112 A 112
Sbjct: 121 V 121
>gi|126650228|ref|ZP_01722456.1| hypothetical protein BB14905_17780 [Bacillus sp. B14905]
gi|126592878|gb|EAZ86860.1| hypothetical protein BB14905_17780 [Bacillus sp. B14905]
Length = 314
Score = 37.3 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 16/52 (30%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
I+ LS + +SGC ++ E + E+E
Sbjct: 8 IRRFMLSCLAVLVLSGCAISIDEPNPQAEPDGEQAETEQDMTQDEQQTVEEE 59
>gi|61657850|emb|CAG38652.1| putative membrane-associated lipoprotein [Ornithobacterium
rhinotracheale]
Length = 379
Score = 37.3 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 26/87 (29%), Gaps = 4/87 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF-QMQLQD 60
+K++ L++ + + C + K + + D+ + + ++
Sbjct: 1 MKKILLAISFSSFVLSCSS---DDYTPATPKETEKPKEEAVVPNKPDEPKADDGNENPEN 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVF 87
TG + P + +
Sbjct: 58 TGDEENGDNTNSVVGKPDDFHMGNRSY 84
>gi|49478683|ref|YP_038595.1| iron compound ABC transporter iron compound-binding protein
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|49330239|gb|AAT60885.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 291
Score = 37.3 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIASVLMAIILLVSIAGCSSPKKETAKQVKSESKERIVATTVAVTEIMDALEVDL 57
>gi|304437369|ref|ZP_07397328.1| thiol-disulfide oxidoreductase ResA [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304369625|gb|EFM23291.1| thiol-disulfide oxidoreductase ResA [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 179
Score = 37.3 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 23/78 (29%), Gaps = 4/78 (5%)
Query: 2 IKELGLSMFIMTTIS---GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+ + + +S GCG +S + + + N G + A L
Sbjct: 1 MKKYTICLAAFVALSVFTGCGSSSAADEGRA-AGAQTQEAQNAGHGLVGEAAPKFAVKNL 59
Query: 59 QDTGIVVSRIGDMITCYI 76
+ V G
Sbjct: 60 TGEDVAVEAKGKPYIINF 77
>gi|262369733|ref|ZP_06063061.1| NLPA lipofamily protein [Acinetobacter johnsonii SH046]
gi|262315801|gb|EEY96840.1| NLPA lipofamily protein [Acinetobacter johnsonii SH046]
Length = 297
Score = 37.3 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Query: 1 MIKELGLSMFIMTTISGCGL--ASREKKKVFLHKSNDTDIVNKRFGSSLD 48
M K LG+++ + ++GC A + + + GS D
Sbjct: 8 MKKILGIALGLSVVLTGCSKPEAPATDATKTDTAAAEQTVTIASTGSDAD 57
>gi|206967612|ref|ZP_03228568.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus AH1134]
gi|218235274|ref|YP_002365179.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus B4264]
gi|229068091|ref|ZP_04201398.1| Ferrichrome-binding periplasmic protein [Bacillus cereus F65185]
gi|206736532|gb|EDZ53679.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus AH1134]
gi|218163231|gb|ACK63223.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus B4264]
gi|228714905|gb|EEL66773.1| Ferrichrome-binding periplasmic protein [Bacillus cereus F65185]
Length = 305
Score = 37.3 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 39/117 (33%), Gaps = 5/117 (4%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L +S+ + +S C +S +KK ++T G A + + L
Sbjct: 1 MKKLFISLTVLFVLVMSACSNSSTDKKDDAKGSKSETITYQSENGKVEVPANPKRVVVLS 60
Query: 60 DTGIVVSRIGDMIT-CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQ 114
V +G + + + L+ + + + P +I +
Sbjct: 61 SFAGNVMSLGVNLVGVDSWSKQNPRFDSKLKDVA-EVSDENVEKIAELNPDLIIGLS 116
>gi|83945257|ref|ZP_00957606.1| peptidyl-dipeptidase Dcp [Oceanicaulis alexandrii HTCC2633]
gi|83851427|gb|EAP89283.1| peptidyl-dipeptidase Dcp [Oceanicaulis alexandrii HTCC2633]
Length = 737
Score = 37.3 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 7/51 (13%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
++ L L+ ++ C + + +T + D+AE
Sbjct: 1 MRSLLLAAVSGLALAACS-QPADTAADTQTTAPETTDSQASDAAMSDEAEA 50
>gi|329956374|ref|ZP_08296971.1| conserved domain protein [Bacteroides clarus YIT 12056]
gi|328524271|gb|EGF51341.1| conserved domain protein [Bacteroides clarus YIT 12056]
Length = 545
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/121 (11%), Positives = 35/121 (28%), Gaps = 12/121 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K M ++GC E + + +N + +A D+ +
Sbjct: 1 MKKNTCFVMLAALMMAGCS---NEIDEQVMDSRRVPLQINGDINMLMTRAADDHWDEKDA 57
Query: 61 TGIVVSRIGDMI---------TCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
G+ + + I + +F + + P + ++ +P +
Sbjct: 58 IGVYMVSAENSIVGDVSNYRYVVIDKNNGNFSPDGETNTAYFPESDDVVNVVAYYPQGNV 117
Query: 112 A 112
Sbjct: 118 V 118
>gi|218899700|ref|YP_002448111.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus G9842]
gi|218540641|gb|ACK93035.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus G9842]
Length = 291
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIVSVLMAIILLMSIAGCSSPKKETAKQVKRESKERVVATTVAVTEIMDALEVDL 57
>gi|145296627|ref|YP_001139448.1| hypothetical protein cgR_2535 [Corynebacterium glutamicum R]
gi|140846547|dbj|BAF55546.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 312
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Query: 2 IKELGLSMFIM-TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K+L ++ I+ ++GC S + D+ V D AE +
Sbjct: 4 MKKLLWTLPILPLVLAGCSTGSADSADSTNTAGADSLKVVTSTQVWADVAEAVAPDVDIE 63
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFL 88
I I ++ VSE +
Sbjct: 64 AIITGGDIDPHSFEPSATDMAKVSEADI 91
>gi|260596804|ref|YP_003209375.1| hypothetical protein CTU_10120 [Cronobacter turicensis z3032]
gi|260215981|emb|CBA28628.1| Uncharacterized lipoprotein yajG [Cronobacter turicensis z3032]
Length = 192
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + + ++GC + D S++ A+ L
Sbjct: 1 MLKKVLFPLVALFMLAGCATPPTTIEVSPKITLPQQDPSLMGVTVSINGADQRQDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQLVTLTASRDLRF 78
>gi|238924772|ref|YP_002938288.1| hypothetical protein EUBREC_2423 [Eubacterium rectale ATCC 33656]
gi|238876447|gb|ACR76154.1| Hypothetical protein EUBREC_2423 [Eubacterium rectale ATCC 33656]
Length = 320
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 5/69 (7%)
Query: 1 MIKELGLSM-----FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
MIK +++ ++GCG + K K + I N + ++D +
Sbjct: 1 MIKNKFMALTLTVVLTAGMLTGCGSGDKAKDKDAYRQYGINCIENGSYDDAVDAFQKALD 60
Query: 56 MQLQDTGIV 64
+ G
Sbjct: 61 QSVGSVGAE 69
>gi|237720153|ref|ZP_04550634.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229450705|gb|EEO56496.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 279
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 28/94 (29%), Gaps = 3/94 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + ++ CG +K L +R K + + L
Sbjct: 1 MMKKLIILFCGTLALAACGNGLEKKANEKL---MVAKAAYERGDYEEAKLQIDSIKILYP 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
+ G + + + +L+ F
Sbjct: 58 KAFEARKAGQALMLDVETKAQQKTLAYLDSAFQA 91
>gi|188534235|ref|YP_001908032.1| Putative lipoprotein protein [Erwinia tasmaniensis Et1/99]
gi|188029277|emb|CAO97154.1| Putative lipoprotein protein [Erwinia tasmaniensis Et1/99]
Length = 187
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/132 (10%), Positives = 36/132 (27%), Gaps = 18/132 (13%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K + +++ T+S CG + + T + + L L
Sbjct: 1 MMKWIPVAL--ALTLSACGSGPKTAYYQLPTVTPSTAVSSSTLARPLWVERVTVPDYLAG 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML-QLIATIL-----------NKFPS 108
+G+V + L+++ L ++ L + +
Sbjct: 59 SGVVYQSNDVQYVIATNNQWA----SPLDQQLQQTLVSNLSATLPQVLISSTPLGQQHDT 114
Query: 109 TVIAIQSHTDSI 120
+ +
Sbjct: 115 LKVDVSGFHGRY 126
>gi|24380047|ref|NP_722002.1| putative ABC transporter, branched chain amino acid-binding
protein [Streptococcus mutans UA159]
gi|290579974|ref|YP_003484366.1| putative ABC transporter branched chain amino acid-binding
protein [Streptococcus mutans NN2025]
gi|24378038|gb|AAN59308.1|AE014996_11 putative ABC transporter, branched chain amino acid-binding
protein [Streptococcus mutans UA159]
gi|254996873|dbj|BAH87474.1| putative ABC transporter branched chain amino acid-binding
protein [Streptococcus mutans NN2025]
Length = 390
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 27/96 (28%), Gaps = 9/96 (9%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFLHKSNDTDIVN------KRFGSSLDKAE 51
M K++ L+ ++ C A +K DT + + +
Sbjct: 1 MKKKIALAALSFVSAAVLAACSSAPGGSSDAAGNKIGDTVKIGYNLELSGDVAAYGQAEK 60
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF 87
+ + +++ G I + S E
Sbjct: 61 NGANLAVEEINKAGGIDGKKIKVISKDNKSDNGEAS 96
>gi|332292162|ref|YP_004430771.1| hypothetical protein Krodi_1520 [Krokinobacter diaphorus
4H-3-7-5]
gi|332170248|gb|AEE19503.1| hypothetical protein Krodi_1520 [Krokinobacter diaphorus
4H-3-7-5]
Length = 420
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 6/90 (6%), Positives = 22/90 (24%), Gaps = 3/90 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + + ++GC + + + S +
Sbjct: 1 MKKLIFSLALLGGILAGCSS---DDDQPIVITEVPGTGGGDDTDSVDTTLSGNITEDITL 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
T + ++ + ++ ++
Sbjct: 58 TNDAIWQLDGRVIVTAGNTLTIEPGTIIKA 87
>gi|330937954|gb|EGH41741.1| hypothetical protein PSYPI_04643 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 994
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 807 DLGSVSFAPGASDLSAEAQKALDKLSVALKERPDLKLEIEG 847
>gi|317495382|ref|ZP_07953751.1| phosphate/phosphite/phosphonate ABC transporter [Gemella
moribillum M424]
gi|316914441|gb|EFV35918.1| phosphate/phosphite/phosphonate ABC transporter [Gemella
moribillum M424]
Length = 294
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 2 IKELGLSMF---IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K++ L++F ++ +++ C S K++ L +++ L+ +L
Sbjct: 1 MKKIFLTIFSIILVFSLAACSQKSSTKEEKVLKLGVVPSSNSEKLVDDLEPFAKALGEKL 60
Query: 59 QDTGIVVS 66
G+ V
Sbjct: 61 ---GVKVE 65
>gi|300855404|ref|YP_003780388.1| putative transporter protein [Clostridium ljungdahlii DSM 13528]
gi|300435519|gb|ADK15286.1| predicted transporter protein [Clostridium ljungdahlii DSM 13528]
Length = 248
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 31/108 (28%), Gaps = 6/108 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K + + I SGC + K ++DT + ++ D +
Sbjct: 1 MKKSILFCLAIGIFFSGCSSTNNTKSTNLAISNSDTTFIMGGKIATNDSVDITSN---IS 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEK---KFLPMLQLIATILNK 105
+ + V + L+ + + + T L+
Sbjct: 58 GRVSEMSTELGKKVNLGDVVIKLDTSDLQSKVDQAKSAVNAVQTNLSS 105
>gi|265753515|ref|ZP_06088870.1| peptidyl-dipeptidase [Bacteroides sp. 3_1_33FAA]
gi|263235229|gb|EEZ20753.1| peptidyl-dipeptidase [Bacteroides sp. 3_1_33FAA]
Length = 701
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 34/101 (33%), Gaps = 8/101 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K + L+ + +SGCG ++ L + V ++ + F +
Sbjct: 1 MKHILLAACAVAILSGCGSQGKQAAPTGNPFLSEYTTPFQVPPFDQIKMEHYKPAFLQGM 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
++ + D I + L++ +L+ +
Sbjct: 61 EEQQKEI----DAIVNNPEPATFQNTIAALDQSG-TLLRKV 96
>gi|237709863|ref|ZP_04540344.1| peptidyl-dipeptidase [Bacteroides sp. 9_1_42FAA]
gi|237725551|ref|ZP_04556032.1| peptidyl-dipeptidase [Bacteroides sp. D4]
gi|229436238|gb|EEO46315.1| peptidyl-dipeptidase [Bacteroides dorei 5_1_36/D4]
gi|229455956|gb|EEO61677.1| peptidyl-dipeptidase [Bacteroides sp. 9_1_42FAA]
Length = 701
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 34/101 (33%), Gaps = 8/101 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K + L+ + +SGCG ++ L + V ++ + F +
Sbjct: 1 MKHILLAACAVAILSGCGSQGKQAAPTGNPFLSEYTTPFQVPPFDQIKMEHYKPAFLQGM 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
++ + D I + L++ +L+ +
Sbjct: 61 EEQQKEI----DAIVNNPEPATFQNTIAALDQSG-TLLRKV 96
>gi|228950893|ref|ZP_04113016.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228808822|gb|EEM55318.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 305
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 39/117 (33%), Gaps = 5/117 (4%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L +S+ + +S C +S +KK ++T G A + + L
Sbjct: 1 MKKLFISLTVLFVLVMSACSNSSTDKKDDAKGSKSETITYQSENGKVEVPANPKRVVVLS 60
Query: 60 DTGIVVSRIGDMIT-CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQ 114
V +G + + + L+ + + + P +I +
Sbjct: 61 SFAGNVMSLGVNLVGVDSWSKQNPRFDSKLKDVA-EVSDENVEKIAELNPDLIIGLS 116
>gi|218282182|ref|ZP_03488481.1| hypothetical protein EUBIFOR_01063 [Eubacterium biforme DSM 3989]
gi|218216818|gb|EEC90356.1| hypothetical protein EUBIFOR_01063 [Eubacterium biforme DSM 3989]
Length = 568
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 54/184 (29%), Gaps = 20/184 (10%)
Query: 2 IKELGLSMFIMTTISGCGL-ASREKKKVFLHKSNDT----------DIVNKRFGSSLDKA 50
+K+ G ++GC +S K N V + +
Sbjct: 7 LKKAGAVCMAAAMMTGCASGSSGTNGKTLTVGLNTGFNGIFSPLYYQTVYDDYVIEMVYQ 66
Query: 51 -------EDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+++ Q +L +S G +T + V F L+ + +L A
Sbjct: 67 SMLSYDRDNQLQPELATEQPTISEDGSTLTFKLKKGVKFSDGSKLDADDV-VLTFTAMAD 125
Query: 104 NKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
+ + + + + I Y + +++ R ++ +PI
Sbjct: 126 PSYTGRFSTYVDYLEGYKEYHEGDAKTLSGVEKIDDYTVAFHLATPRIDAISQVG-TFPI 184
Query: 164 DTND 167
+N
Sbjct: 185 ISNS 188
>gi|212693052|ref|ZP_03301180.1| hypothetical protein BACDOR_02559 [Bacteroides dorei DSM 17855]
gi|212664419|gb|EEB24991.1| hypothetical protein BACDOR_02559 [Bacteroides dorei DSM 17855]
Length = 701
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 34/101 (33%), Gaps = 8/101 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVF---LHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K + L+ + +SGCG ++ L + V ++ + F +
Sbjct: 1 MKHILLAACAVAILSGCGSQGKQAAPTGNPFLSEYTTPFQVPPFDQIKMEHYKPAFLQGM 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
++ + D I + L++ +L+ +
Sbjct: 61 EEQQKEI----DAIVNNPEPATFQNTIAALDQSG-TLLRKV 96
>gi|212716874|ref|ZP_03325002.1| hypothetical protein BIFCAT_01817 [Bifidobacterium catenulatum DSM
16992]
gi|212660159|gb|EEB20734.1| hypothetical protein BIFCAT_01817 [Bifidobacterium catenulatum DSM
16992]
Length = 264
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 38/107 (35%), Gaps = 5/107 (4%)
Query: 1 MIKELGLSMFIMTTISG---CGLASREKKKVFLHKSNDTDIVN-KRFGSSLDKAEDEFQM 56
M+K++ ++ + I+G CG E ++ S +DK + + +
Sbjct: 1 MMKKVFAAILSIALIAGVSACGEKKAEGPDYADDEAMSIIAEGFSNRSSLIDKLKGQGKD 60
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL 103
+ + I I P+ + L+++ + L + L
Sbjct: 61 TSESKNLQ-QIIQAEIDNDKPLKARQFKDSKLQEQIIAYLNSLDDQL 106
>gi|169826243|ref|YP_001696401.1| iron ABC transporter substrate-binding protein [Lysinibacillus
sphaericus C3-41]
gi|168990731|gb|ACA38271.1| iron ABC transporter substrate-binding protein [Lysinibacillus
sphaericus C3-41]
Length = 368
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 19/163 (11%), Positives = 45/163 (27%), Gaps = 17/163 (10%)
Query: 2 IKEL----GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+K+ +FI+ ++ C ++K +ND + + + +
Sbjct: 1 MKKTHILSFFLVFILFALAACSGND-DQKTTNDAANNDKTTDGDKTEVAATTPSGKLVIY 59
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
+V + D P L +L+ + P
Sbjct: 60 TGRDEEMVQNVIDQFNKKYPDIEVEF----LTMGAQQILERLRGE-KANPQA------DF 108
Query: 118 DSIGTLKNNLLISQERADVIKSY-LIQRGVSSNRFISVRGFAY 159
GT ++ + E I ++++ + R F
Sbjct: 109 WWGGTQSALIVGANEDLLHAWQPSFIDSLDATHKDVEGRWFGE 151
>gi|167771585|ref|ZP_02443638.1| hypothetical protein ANACOL_02957 [Anaerotruncus colihominis DSM
17241]
gi|167666225|gb|EDS10355.1| hypothetical protein ANACOL_02957 [Anaerotruncus colihominis DSM
17241]
Length = 366
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 7/43 (16%), Positives = 16/43 (37%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF 43
M K L L + + +++ C A + + + T +
Sbjct: 1 MRKILSLILAAVFSLTACSEAGGSQGSAVVQEPAATASSSGEV 43
>gi|156935015|ref|YP_001438931.1| hypothetical protein ESA_02866 [Cronobacter sakazakii ATCC
BAA-894]
gi|156533269|gb|ABU78095.1| hypothetical protein ESA_02866 [Cronobacter sakazakii ATCC
BAA-894]
Length = 192
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + + ++GC + D S++ A+ L
Sbjct: 1 MLKKVLFPLVALFMLAGCATPPTTIEVSPKITLPQQDPSLMGVTVSINGADQRQDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQLVTLTASRDLRF 78
>gi|302341446|ref|YP_003805975.1| FKBP-type peptidyl-prolyl isomerase domain protein [Desulfarculus
baarsii DSM 2075]
gi|301638059|gb|ADK83381.1| FKBP-type peptidyl-prolyl isomerase domain protein [Desulfarculus
baarsii DSM 2075]
Length = 243
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 41/110 (37%), Gaps = 3/110 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ + + +SGC LA + L + + I+ +FG+ + K + ++
Sbjct: 1 MKKIIFAALAIILVSGCALADGKPSFNTL-EEKISYIIGFQFGADMSKDQINVSPEVFLK 59
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLE--KKFLPMLQLIATILNKFPST 109
G+ G+ + + E ++ + ++ A K
Sbjct: 60 GMKDGLAGNKSALDEKQAAAAMDEFRVKMMAQQQAKMKEQAAENKKKGDA 109
>gi|301052064|ref|YP_003790275.1| ferrichrome ABC transporter periplasmatic protein [Bacillus
anthracis CI]
gi|300374233|gb|ADK03137.1| ferrichrome ABC transporter, periplasmatic protein [Bacillus cereus
biovar anthracis str. CI]
Length = 305
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 39/117 (33%), Gaps = 5/117 (4%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L +S+ + +S C S +KKK ++T G A + + L
Sbjct: 1 MKKLFISLTVLFVLVMSACSNGSTDKKKDAKGSKSETITYQSENGKVEVPANPKRVVVLS 60
Query: 60 DTGIVVSRIGDMIT-CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQ 114
V +G + + + L+ + + + P +I +
Sbjct: 61 SFAGNVMSLGVNLVGVDSWSKQNPRFDSKLKDVA-EVSDENVEKIAELNPDLIIGLS 116
>gi|300690560|ref|YP_003751555.1| outer membrane protein H.8 precursor (fragment) [Ralstonia
solanacearum PSI07]
gi|299077620|emb|CBJ50255.1| putative outer membrane protein H.8 precursor (fragment)
[Ralstonia solanacearum PSI07]
Length = 139
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 31/99 (31%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + L L++ T++GCG + K ++ + D Q + D
Sbjct: 1 MNRPLFLAVLAAITLAGCGRSDESGKAGAPAPASAPAATASASTPAAPAVSDADQAKAID 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ R + + V + + +L+
Sbjct: 61 LAVAAIRQYKLTSLSPDCLSFIVDQEDATHDSVEVLENH 99
>gi|300772659|ref|ZP_07082529.1| conserved hypothetical protein [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760962|gb|EFK57788.1| conserved hypothetical protein [Sphingobacterium spiritivorum
ATCC 33861]
Length = 128
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 6/80 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MIK LGL +F + S C + I G+S + L D
Sbjct: 4 MIKILGLLVFTVAIFSACSKDDDPADNDIFVGKYNGKISYTDLGNSQN------NKPLAD 57
Query: 61 TGIVVSRIGDMITCYIPVHV 80
+ V ++G+ T Y +
Sbjct: 58 GTVTVQKLGNSYTFYFNNDI 77
>gi|228983423|ref|ZP_04143635.1| hypothetical protein bthur0001_1530 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228776289|gb|EEM24643.1| hypothetical protein bthur0001_1530 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 433
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Query: 1 MIKELG----LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K+L + I+GCG + K+ + + ++ AE + +
Sbjct: 1 MSKKLLSLFSAVIVAAFVITGCGQSDTTNKEQKENAAKESKTEKTDTTKESKPAEKKSED 60
Query: 57 QLQDT 61
+ +
Sbjct: 61 KKTED 65
>gi|259908672|ref|YP_002649028.1| Membrane-bound lytic murein transglycosylase E [Erwinia
pyrifoliae Ep1/96]
gi|224964294|emb|CAX55801.1| Membrane-bound lytic murein transglycosylase E [Erwinia
pyrifoliae Ep1/96]
gi|283478641|emb|CAY74557.1| membrane-bound lytic murein transglycosylase E [Erwinia
pyrifoliae DSM 12163]
Length = 211
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 26/86 (30%), Gaps = 6/86 (6%)
Query: 1 MIKELGLSMFIMTT-ISGCGLASREK---KKVFLHKSNDTDIVNKRFGSSLDKAEDE--F 54
M K +G++ + ++GC + K V + ++A
Sbjct: 1 MNKSVGIAALVAVVMLAGCASKPKNNSGLKPNTALTQAPPATVASAWSMMTEQAAQRNGV 60
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHV 80
+L + I V G+ +
Sbjct: 61 DQKLVEAIITVESGGNPTVVSKSNAI 86
>gi|254524292|ref|ZP_05136347.1| peptidase, M48 family [Stenotrophomonas sp. SKA14]
gi|219721883|gb|EED40408.1| peptidase, M48 family [Stenotrophomonas sp. SKA14]
Length = 268
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD--KAEDEFQMQLQ 59
+K+L L++ I T +S C + + + +++ + K +++ +
Sbjct: 1 MKQLLLALVITTLVSACATTTSPTGRRQMVGGVSQAQLDQLGAQAFAETKQKEKISTDGR 60
Query: 60 DTGIVVSRIGDMITCYIPVHV 80
G V + + + +P
Sbjct: 61 QNGY-VQCVVNALVAQLPAQY 80
>gi|77919638|ref|YP_357453.1| membrane-bound lytic murein transglycosylase D [Pelobacter
carbinolicus DSM 2380]
gi|77545721|gb|ABA89283.1| membrane-bound lytic murein transglycosylase D precursor
[Pelobacter carbinolicus DSM 2380]
Length = 617
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 21/49 (42%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK 49
M+K GL + + ++GC + + + D+ + S +++
Sbjct: 1 MLKRYGLVILVAGLLAGCQTSMQSVAVGGGDEPADSVRMEAVADSGMEQ 49
>gi|71066667|ref|YP_265394.1| lipolytic protein [Psychrobacter arcticus 273-4]
gi|71039652|gb|AAZ19960.1| probable Lipolytic enzyme, G-D-S-L family protein [Psychrobacter
arcticus 273-4]
Length = 270
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 34/112 (30%), Gaps = 10/112 (8%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSN-DTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
++ + ISGC + T +N+ + L + + Q +
Sbjct: 14 TVAALTVAIAISGCQKTPDADDTKTDTGTQDSTQTINQTSDTQLSQTTPKTNSAEQQAPL 73
Query: 64 VVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ +GD +T + V ++ + LQ + + +
Sbjct: 74 TILALGDSLTEGLGVD----NDANYPAQLQTRLQELG-----YKDIKVINSG 116
>gi|33596389|ref|NP_884032.1| putative efflux system outer membrane component [Bordetella
parapertussis 12822]
gi|33602322|ref|NP_889882.1| putative efflux system outer membrane component [Bordetella
bronchiseptica RB50]
gi|33566158|emb|CAE37062.1| putative efflux system outer membrane component [Bordetella
parapertussis]
gi|33576761|emb|CAE33839.1| putative efflux system outer membrane component [Bordetella
bronchiseptica RB50]
Length = 499
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 16/133 (12%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K LS+ + ++GC LA K+ ++N D ++G+ +
Sbjct: 5 MYKRSALSVLVAAALAGCSLAPDYKRPEAPVQANWPDQPKVQYGAYASP-----TSLGEQ 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD-- 118
V+ G I F L+K L +A L +A+Q +
Sbjct: 60 PAAAVAPQGATPADEIGWREFFRD-ARLQK-----LIELA--LVNNRDLRVAVQRVEEAR 111
Query: 119 -SIGTLKNNLLIS 130
G + S
Sbjct: 112 AQYGVQRGAQWPS 124
>gi|330448547|ref|ZP_08312195.1| DSBA-like thioredoxin domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328492738|dbj|GAA06692.1| DSBA-like thioredoxin domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 259
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/160 (12%), Positives = 44/160 (27%), Gaps = 19/160 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK------------ 49
+K+L L + + ++GC + K F + + K + +
Sbjct: 1 MKKLILPLMVTALLAGCNETTAVNNKDFSPEQK--AQIEKIASQYIIEHPEVLVKASETL 58
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK-KFLP----MLQLIATILN 104
+ + Q Q Q V D + + + + +F IA I+
Sbjct: 59 QKKQMQAQEQSAKQTVITYADKLVKNDKTPFVGLKDAKVNVIEFFDYQCMYCSKIAPIVK 118
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
++ + S+ AD+
Sbjct: 119 SLEQANPDVKFIFKETPIFASRWDASKYAADMGNWIFAHN 158
>gi|315922264|ref|ZP_07918504.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313696139|gb|EFS32974.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 279
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 28/94 (29%), Gaps = 3/94 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + ++ CG +K L +R K + + L
Sbjct: 1 MMKKLIILFCGTLALAACGNGLEKKANEKL---MVAKAAYERGDYEEAKLQIDSIKILYP 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
+ G + + + +L+ F
Sbjct: 58 KAFEARKAGQALMLDVETKAQQKTLAYLDSAFQA 91
>gi|300861390|ref|ZP_07107475.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|300849150|gb|EFK76902.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
Length = 117
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQD 60
IK + +S+ + ++GC + E + + S + A E++ +
Sbjct: 35 IKMIFISLLTVAVLAGCSETAEETPQTNSPDETTAVTKSTSDTSDSETATEEDLSESEAE 94
Query: 61 TG 62
+
Sbjct: 95 SP 96
>gi|238927382|ref|ZP_04659142.1| cytochrome c biogenesis protein ResA [Selenomonas flueggei ATCC
43531]
gi|238884664|gb|EEQ48302.1| cytochrome c biogenesis protein ResA [Selenomonas flueggei ATCC
43531]
Length = 179
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 23/78 (29%), Gaps = 4/78 (5%)
Query: 2 IKELGLSMFIMTTIS---GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+ + + +S GCG +S + + + N G + A L
Sbjct: 1 MKKYTICLAAFVALSVFTGCGSSSAADEGRA-AGAQTQEAQNAGHGLVGEAAPKFAVKNL 59
Query: 59 QDTGIVVSRIGDMITCYI 76
+ V G
Sbjct: 60 TGEDVAVEAKGKPYIINF 77
>gi|57865505|ref|YP_189637.1| adhesion lipoprotein [Staphylococcus epidermidis RP62A]
gi|57636163|gb|AAW52951.1| adhesion lipoprotein, putative [Staphylococcus epidermidis RP62A]
Length = 315
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 27/103 (26%), Gaps = 12/103 (11%)
Query: 2 IKELGLSMFIMTTISGCGL---------ASREKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
+K+L + I+ +SGC + K KV+ + + G +D
Sbjct: 1 MKKLIIVSIIILMLSGCSSFDHRKRESINDKNKMKVYTTVYAFQSLTQQIGGKYVDVQSI 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM 95
+ + S L+ +
Sbjct: 61 YPDGA---DLHSYEPTQKDMIDIAKSDLFVYSSHQLDPVAAKI 100
>gi|307546629|ref|YP_003899108.1| hypothetical protein HELO_4039 [Halomonas elongata DSM 2581]
gi|307218653|emb|CBV43923.1| hypothetical protein HELO_4039 [Halomonas elongata DSM 2581]
Length = 194
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 9/91 (9%), Positives = 26/91 (28%), Gaps = 2/91 (2%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+ G + M ++GC + + + + + D+ + + +
Sbjct: 8 KFGFGLVAMALLAGCAGQGHQYAQGVCITCVNPPLTGEPLNYDPDETPMQVAQNAEGETV 67
Query: 64 VVSRIGDMITCYIPVHVSFVSEVF--LEKKF 92
V +G V + ++ F
Sbjct: 68 GVQELGPQSGKVQIESPVDVDTAYARIKPAF 98
>gi|302385381|ref|YP_003821203.1| Endothelin-converting enzyme 1 [Clostridium saccharolyticum WM1]
gi|302196009|gb|ADL03580.1| Endothelin-converting enzyme 1 [Clostridium saccharolyticum WM1]
Length = 686
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 9/103 (8%)
Query: 2 IKE-----LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+K L + + ISGCG + + + V S+ ++ DE ++
Sbjct: 1 MKHRINFCLAAIVMLSFLISGCGKTKEAQPEQT---AAQPANVTGEAKSAPEETSDEGRL 57
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ G V + D + L+K+ +L +
Sbjct: 58 EDDYYGYVNRNLLDHTEIPKDSNSWSYF-YQLKKESYEVLNEV 99
>gi|218661679|ref|ZP_03517609.1| hypothetical protein RetlI_20436 [Rhizobium etli IE4771]
Length = 113
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 24/60 (40%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ ++ T++GC +V + + T++ + + L K + +
Sbjct: 1 MKKIIIAFVATATLAGCAKRPDAIVQVDIPMAAYTNLSCEALAAELKKERAKLDDLSKQQ 60
>gi|282879676|ref|ZP_06288406.1| putative lipoprotein [Prevotella timonensis CRIS 5C-B1]
gi|281306345|gb|EFA98375.1| putative lipoprotein [Prevotella timonensis CRIS 5C-B1]
Length = 176
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 37/117 (31%), Gaps = 12/117 (10%)
Query: 2 IKELGLSMFIMTTISGCGLASR--------EKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
+K++ S+ + +S C + + S F D
Sbjct: 1 MKKIFYSLLCIIGLSACSSENVVLDSLRVYDVANSTCKLSLSATETRPDFYLEKDAVPAT 60
Query: 54 FQMQLQDTGIVVSRIGDM----ITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++L GI + D+ I V++ + + + +L +A + K+
Sbjct: 61 LSIELGKDGIAQCVLEDVKANCAVRNIYVNIVNQDDQIILVVYHNVLDALADCICKY 117
>gi|284005612|ref|YP_003391432.1| hypothetical protein Slin_6677 [Spirosoma linguale DSM 74]
gi|283820796|gb|ADB42633.1| conserved hypothetical protein [Spirosoma linguale DSM 74]
Length = 222
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 68/207 (32%), Gaps = 34/207 (16%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + ++ + KV + I D + EF +
Sbjct: 15 LMTVLMVIFLFIALAYMGLLQNKVGQVEDVKAKI-------YTD-LKAEFSQVATQWNLE 66
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATI---LNKFPSTV-----IAIQSH 116
+ I + + KF+ +L + P V + ++ H
Sbjct: 67 I-NNDLSIRFKDADGLFDGGKGVPTGKFVNILNQFIPKYLAIISKPEYVKSIEEVRVEGH 125
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSS----------NRFISVRGFAYKYPIDTN 166
T S G + + +SQ+RA+ + YL++ ++ G+ + +D +
Sbjct: 126 TAS-GDYQQTIELSQQRANNVLYYLVKHPSFFRLNQESQRHLQYILTTSGYGWSRALDAD 184
Query: 167 D--TKVGRQN----NQRIEIQIFPRGN 187
+K+ R+ ++R+E +I +
Sbjct: 185 GKYSKITRKQYDVQSRRVEFRIVTNSD 211
>gi|225574227|ref|ZP_03782837.1| hypothetical protein RUMHYD_02291 [Blautia hydrogenotrophica DSM
10507]
gi|225038595|gb|EEG48841.1| hypothetical protein RUMHYD_02291 [Blautia hydrogenotrophica DSM
10507]
Length = 568
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/182 (11%), Positives = 48/182 (26%), Gaps = 20/182 (10%)
Query: 1 MIKELGLSMFI----MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M + L + T + GCG S + ++ + + +A E
Sbjct: 17 MKRRLIALLLAGAMVATALVGCGSKSDDSASEDQSSASTEESAGETTKIVNKEATIEVPD 76
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
++ G I + + ++ + + + + I
Sbjct: 77 EVTKGG------ELKIALTSSPKNLDPVKYTGTYESQ-IIYQVCDTVVTYDKELEEI--- 126
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSN--RFISVRGFAYKYPIDTNDTKVGRQN 174
S+ T E I+ + + R ++ AY N +
Sbjct: 127 LPSLATDWTISDDGMEYTFTIRDDVYFQPGEYQDGRLMTAEDVAYSM----NRSAQESAM 182
Query: 175 NQ 176
N+
Sbjct: 183 NR 184
>gi|91775172|ref|YP_544928.1| hypothetical protein Mfla_0819 [Methylobacillus flagellatus KT]
gi|91709159|gb|ABE49087.1| hypothetical protein Mfla_0819 [Methylobacillus flagellatus KT]
Length = 124
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 3/86 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + LS+ T++GC K ++ D G+ + + E
Sbjct: 1 MKTITLSLITALTLAGCASTQTYKAPTQNYRLKGQDNAITINGAIFSQKKHELDTPKLTA 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVF 87
GI ++ + +P+ +
Sbjct: 61 GIYIN---GSLYIEVPLDRQGNGQAT 83
>gi|42783716|ref|NP_980963.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus ATCC 10987]
gi|42739645|gb|AAS43571.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus ATCC 10987]
Length = 293
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 3 KEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEFQMQL 58
K++ +++ ++ +I+GC + +E K +S + + +D E +
Sbjct: 4 KKIASVLMAIILLVSIAGCSSSKKETAKQVKSESKERVVATTVAVTEIMDALEVDLVGVP 63
Query: 59 QDTGIVVSR 67
+ I+ R
Sbjct: 64 TSSKILPKR 72
>gi|15614147|ref|NP_242450.1| hypothetical protein BH1584 [Bacillus halodurans C-125]
gi|10174201|dbj|BAB05303.1| BH1584 [Bacillus halodurans C-125]
Length = 318
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 36/111 (32%), Gaps = 8/111 (7%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREK--KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K +G + + ++ I GC + + + ++ + + E +
Sbjct: 4 MKKIVGSLIGVMLLLFIVGCSNTEQMEMFDAGNMEGADMNVATDYSVSEEGMEEEAALEK 63
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLE----KKFLPMLQLIATIL 103
DT I G + + + + ++ +E + L A L
Sbjct: 64 VELDTEIETEERGSAVPEGMERMIIYTGDMEVEVESYDEAEQQLTSTAQSL 114
>gi|319649467|ref|ZP_08003623.1| hypothetical protein HMPREF1013_00227 [Bacillus sp. 2_A_57_CT2]
gi|317398629|gb|EFV79311.1| hypothetical protein HMPREF1013_00227 [Bacillus sp. 2_A_57_CT2]
Length = 140
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K L L ++ + ++ C S ++KV ++K + +++ +
Sbjct: 1 MKKYLFLFAIMFIGLLTACSSESSNEEKVTVNKLITAFTEAGLEAEDPTELDNKEFGNTR 60
Query: 60 DTGIVV 65
+ GI +
Sbjct: 61 EEGIRI 66
>gi|257458010|ref|ZP_05623169.1| oligopeptide ABC transporter substrate-binding protein [Treponema
vincentii ATCC 35580]
gi|257444723|gb|EEV19807.1| oligopeptide ABC transporter substrate-binding protein [Treponema
vincentii ATCC 35580]
Length = 486
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 10/129 (7%)
Query: 1 MIKELGLSMFI---MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L ++ F+ M ++ CG + + + + + + K + + E E
Sbjct: 1 MSKGLKITAFLCAVMMVLASCGGKTEQTQTAQSGEGKEANKELKLLFPQMIEREGEI--- 57
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L +V +GD I + + ML ++A + P+ I +
Sbjct: 58 LAGGTLVCGLVGDTPWKGIFNTFLYEDN----PTYEAMLPMLANFMVDGPNHEIRNGGYC 113
Query: 118 DSIGTLKNN 126
D +
Sbjct: 114 DMTFDREKK 122
>gi|256842263|ref|ZP_05547767.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262384831|ref|ZP_06077963.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|301309012|ref|ZP_07214957.1| putative lipoprotein [Bacteroides sp. 20_3]
gi|256736147|gb|EEU49477.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262293547|gb|EEY81483.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|300833038|gb|EFK63663.1| putative lipoprotein [Bacteroides sp. 20_3]
Length = 263
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++++ + ++GC +K L S D ++++ D + + +
Sbjct: 1 MRKIASLFVALLLLAGCSSVPLTGRKQVLLVS-DQEVLSSSLTQYNDYIKTAKKSTNANK 59
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVF 87
+V+R+G I ++
Sbjct: 60 SAMVTRVGKRIAAATEDYLRANGMAD 85
>gi|253581592|ref|ZP_04858817.1| SpoIID-domain sporulation protein [Fusobacterium varium ATCC 27725]
gi|251836662|gb|EES65197.1| SpoIID-domain sporulation protein [Fusobacterium varium ATCC 27725]
Length = 535
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 53/191 (27%), Gaps = 14/191 (7%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K+ + +++ +M I+GC S +K + D +
Sbjct: 1 MKKKLSKIFIAIIMMVFIAGCSSTSSKKSSSVGGFGGIFTSSKPQKAQHTDADYELDYSF 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI--ATILNKFPSTVIAIQS 115
+ G+ + + L++ + IL F T I
Sbjct: 61 FKQKGLPIPDNFKGKSVE----YLVPGNDVLKEHGYSFFKKYDEKEILKFFKDTSITGYG 116
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNN 175
++S +E + + L R + + N VG
Sbjct: 117 -SNSNYWRWKITFTEKELMNSVARNLPMVYRVRPRDVMTLNKGEWKSLPINAAAVGEVK- 174
Query: 176 QRIEIQIFPRG 186
+I++ RG
Sbjct: 175 ---DIEVAARG 182
>gi|255038465|ref|YP_003089086.1| hypothetical protein Dfer_4720 [Dyadobacter fermentans DSM 18053]
gi|254951221|gb|ACT95921.1| hypothetical protein Dfer_4720 [Dyadobacter fermentans DSM 18053]
Length = 425
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 8/91 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + LS I+GC + + + + + + G+ + +Q
Sbjct: 6 MKQLFMLSALAAFLITGCSD-DKSEPTPVNPQPTEESVSGEVSGTWTKGNTYKVTGHIQ- 63
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
G +T V V F S+ ++ +
Sbjct: 64 -----IPDGKSLTIEEGVTVLF-SDSIIKPE 88
>gi|161485784|ref|NP_706327.3| hypothetical protein SF0378 [Shigella flexneri 2a str. 301]
gi|161486535|ref|NP_836107.2| hypothetical protein S0385 [Shigella flexneri 2a str. 2457T]
gi|313646940|gb|EFS11397.1| uncharacterized lipofamily protein [Shigella flexneri 2a str.
2457T]
gi|332760724|gb|EGJ91012.1| hypothetical protein SF434370_0578 [Shigella flexneri 4343-70]
gi|332761463|gb|EGJ91745.1| hypothetical protein SF274771_0451 [Shigella flexneri 2747-71]
gi|332763730|gb|EGJ93968.1| hypothetical protein SFK671_0430 [Shigella flexneri K-671]
gi|332768354|gb|EGJ98538.1| hypothetical protein SF293071_0484 [Shigella flexneri 2930-71]
gi|333008056|gb|EGK27532.1| hypothetical protein SFK218_0669 [Shigella flexneri K-218]
Length = 192
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 1 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQIVTLTASRALRF 78
>gi|330969659|gb|EGH69725.1| hypothetical protein PSYAR_04113 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 994
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 807 DLGSVSFAPGTSDLSAEAQKALDKLSVALKERPDLKLEIEG 847
>gi|329769030|ref|ZP_08260452.1| hypothetical protein HMPREF0433_00216 [Gemella sanguinis M325]
gi|328839521|gb|EGF89097.1| hypothetical protein HMPREF0433_00216 [Gemella sanguinis M325]
Length = 179
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 12/98 (12%), Positives = 34/98 (34%), Gaps = 9/98 (9%)
Query: 2 IKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K++ +SM ++ + GC + SN T+ +K +++ ++
Sbjct: 1 MKKVLSIISMVLLIFLVGCSSKDSGTSNNSQNTSNVTES---NKSEESNKNKEDSTKNVE 57
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ G + V + L++ ++
Sbjct: 58 VSKFYTEANG----VKLEVTYYHKGDKVLKQTAYNIMN 91
>gi|312902550|ref|ZP_07761756.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0635]
gi|310634220|gb|EFQ17503.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0635]
Length = 542
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|257416895|ref|ZP_05593889.1| oligopeptide ABC transporter [Enterococcus faecalis AR01/DG]
gi|257158723|gb|EEU88683.1| oligopeptide ABC transporter [Enterococcus faecalis ARO1/DG]
Length = 542
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLIYTFTIRKDAK 105
>gi|196042681|ref|ZP_03109920.1| putative lipoprotein [Bacillus cereus 03BB108]
gi|229185750|ref|ZP_04312927.1| VanW [Bacillus cereus BGSC 6E1]
gi|196026165|gb|EDX64833.1| putative lipoprotein [Bacillus cereus 03BB108]
gi|228597722|gb|EEK55365.1| VanW [Bacillus cereus BGSC 6E1]
Length = 303
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 48/169 (28%), Gaps = 21/169 (12%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K + + + + +SGCG + + G +A+ E Q + +
Sbjct: 6 KGILVGVLCVAVVSGCGTKVSD------------VALVSDIGGHTVEAKAEIQDSI--SL 51
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ ++ + F E KF + +A+ + K +
Sbjct: 52 VDGRTGTEVKKLDLSSLGYFEDEA----KFKKSVTKVASEVGKSVDKKMVPSRVAPDGSW 107
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +++ L S+ + + K P T G
Sbjct: 108 QEGKPSYELMEKELVDKLLNVGMWDSSYQLPIV---EKKPTATLSDAQG 153
>gi|90580376|ref|ZP_01236183.1| hypothetical protein VAS14_20631 [Vibrio angustum S14]
gi|90438678|gb|EAS63862.1| hypothetical protein VAS14_20631 [Vibrio angustum S14]
Length = 242
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 42/137 (30%), Gaps = 21/137 (15%)
Query: 2 IKELGLS-MFIMTTISGCGLASR---EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
+K L ++ + + +SGC + L+ + T + + S++++ E
Sbjct: 1 MKRLTITTLLAVALLSGCSSKEEVIPDVPPSNLYATAQTALQKGNWTSAIEQLEA----- 55
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP-----STVIA 112
D+ D + + ++ L + I L P V+
Sbjct: 56 -LDSRYPFGAYSDQVQLDLIYAYYKSDDLALGEA------TIERFLRLNPDNPQADWVVY 108
Query: 113 IQSHTDSIGTLKNNLLI 129
++ T +
Sbjct: 109 MRGLTHMAQDRSFMHDM 125
>gi|34541173|ref|NP_905652.1| hypothetical protein PG1508 [Porphyromonas gingivalis W83]
gi|34397489|gb|AAQ66551.1| hypothetical protein PG_1508 [Porphyromonas gingivalis W83]
Length = 182
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 6/48 (12%), Positives = 14/48 (29%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD 48
M+K++ + + + +GC E + D
Sbjct: 1 MMKKMYVFILCLIVFAGCSQTDNEPVTEGKSLITAVTRSGNAEEMASD 48
>gi|23099837|ref|NP_693303.1| hypothetical protein OB2382 [Oceanobacillus iheyensis HTE831]
gi|22778068|dbj|BAC14338.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 279
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 10/81 (12%), Positives = 26/81 (32%), Gaps = 3/81 (3%)
Query: 2 IKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L L++ + ++ CG + V + E+ + L+
Sbjct: 1 MKKLLFLLAISFVGLLAACGTSDEGSSGDGSSNETTEITVGASSVPHAEVLEEA-KPLLE 59
Query: 60 DTGIVVSRIGDMITCYIPVHV 80
+ GI ++ +
Sbjct: 60 EQGITLNIEEYQDYILPNDDL 80
>gi|269214825|ref|ZP_06158855.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Neisseria lactamica ATCC 23970]
gi|269209010|gb|EEZ75465.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Neisseria lactamica ATCC 23970]
Length = 379
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 30/114 (26%), Gaps = 5/114 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL-Q 59
M K L + + ++ CG S + K + D + E +
Sbjct: 1 MKKTLVAAAILSLALTACGGGSDTAAQTPSAKPEAGQSGKLNIYNWSDYVDPETVAAFEK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+TGI + V S L P + + + I
Sbjct: 61 ETGIKTRSDYYDSNETLEAKVLTGKSGYDLTA---PSIANVGRQIKAGAYQKID 111
>gi|323651068|ref|YP_004243495.1| hypothetical protein pls20_p008 [Bacillus subtilis subsp. natto]
gi|323461491|dbj|BAJ76908.1| conserved hypothetical protein [Bacillus subtilis subsp. natto]
Length = 111
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 10/94 (10%), Positives = 34/94 (36%), Gaps = 10/94 (10%)
Query: 2 IKELGL----SMFIMTTISGCGLASREKK----KVFLHKSNDTDIVNKRFGSSLDKAEDE 53
+K++ L + + ++GC S ++ + ++ T V + G + + +
Sbjct: 18 MKKILLILTFVILAFSALTGCSSESWDRTVKDHESSVNGLKRTATVYDQNGKVIKTYKGK 77
Query: 54 FQMQLQ--DTGIVVSRIGDMITCYIPVHVSFVSE 85
F +++ + G + + + +
Sbjct: 78 FDVEVNDYGNKVKFDIDGKRVVINNAIVIVEEDK 111
>gi|319794167|ref|YP_004155807.1| hypothetical protein Varpa_3512 [Variovorax paradoxus EPS]
gi|315596630|gb|ADU37696.1| protein of unknown function DUF748 [Variovorax paradoxus EPS]
Length = 1253
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 20/76 (26%), Gaps = 10/76 (13%)
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
L L +A L + P+ + + +
Sbjct: 1077 FEAGSSVLSAAAKESLDEVAKALAERPTLEMTVIGTSSLEKERDAYQR----------QR 1126
Query: 141 LIQRGVSSNRFISVRG 156
+ Q + R ++VRG
Sbjct: 1127 VRQLTQAEKRRVAVRG 1142
>gi|315168707|gb|EFU12724.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX1341]
gi|327535942|gb|AEA94776.1| oligopeptide ABC superfamily ATP binding cassette transporter,
binding protein [Enterococcus faecalis OG1RF]
Length = 542
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|315159597|gb|EFU03614.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0312]
Length = 542
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|315280816|ref|ZP_07869608.1| fumarate reductase flavoprotein subunit [Listeria marthii FSL
S4-120]
gi|313615538|gb|EFR88891.1| fumarate reductase flavoprotein subunit [Listeria marthii FSL
S4-120]
Length = 504
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Query: 1 MIKELG----LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
M K L + + + I+GCG + K K S D +E
Sbjct: 1 MKKRLATTLIMLLSLALVIAGCGSNNSSKSDTAKEKEKTEVTSGASKTSYTDPSE 55
>gi|325109499|ref|YP_004270567.1| leucine-rich repeat cysteine-containing subtype [Planctomyces
brasiliensis DSM 5305]
gi|324969767|gb|ADY60545.1| leucine-rich repeat cysteine-containing subtype [Planctomyces
brasiliensis DSM 5305]
Length = 381
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 33/104 (31%), Gaps = 13/104 (12%)
Query: 2 IKELGL------SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+K L ++ + GC + ++ +S G+ D AE
Sbjct: 1 MKRFCLLQWIFSALLACSITVGCSRPAETPQETTSTESEAHVKSEDTPGADPDPAEA--V 58
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
++ + + GD + F+ + + + L L +
Sbjct: 59 AAIEQISAGMRKNGDDQIIEVD----FIGK-EVSPEALEALAKL 97
>gi|296314995|ref|ZP_06864936.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Neisseria polysaccharea ATCC 43768]
gi|296838196|gb|EFH22134.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Neisseria polysaccharea ATCC 43768]
Length = 399
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 30/114 (26%), Gaps = 5/114 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL-Q 59
M K L + + ++ CG S + K + D + E +
Sbjct: 21 MKKTLVAAAILSLALTACGGGSDTAAQTSSAKPEAGQSGKLNIYNWSDYVDPETVADFEK 80
Query: 60 DTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+TGI + V S L P + + + I
Sbjct: 81 ETGIKTRSDYYDSNETLEAKVLTGKSGYDLTA---PSIANVGRQIKAGAYQKID 131
>gi|229544892|ref|ZP_04433617.1| oligopeptide ABC superfamily ATP binding cassette transporter,
binding protein [Enterococcus faecalis TX1322]
gi|257079890|ref|ZP_05574251.1| oligopeptide ABC transporter [Enterococcus faecalis JH1]
gi|257090911|ref|ZP_05585272.1| predicted protein [Enterococcus faecalis CH188]
gi|294779906|ref|ZP_06745288.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis PC1.1]
gi|307269245|ref|ZP_07550599.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX4248]
gi|307271777|ref|ZP_07553048.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0855]
gi|229309993|gb|EEN75980.1| oligopeptide ABC superfamily ATP binding cassette transporter,
binding protein [Enterococcus faecalis TX1322]
gi|256987920|gb|EEU75222.1| oligopeptide ABC transporter [Enterococcus faecalis JH1]
gi|256999723|gb|EEU86243.1| predicted protein [Enterococcus faecalis CH188]
gi|294453018|gb|EFG21438.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis PC1.1]
gi|306511655|gb|EFM80654.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0855]
gi|306514464|gb|EFM83025.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX4248]
Length = 542
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|255658234|ref|ZP_05403643.1| metallo-beta-lactamase family protein [Mitsuokella multacida DSM
20544]
gi|260849544|gb|EEX69551.1| metallo-beta-lactamase family protein [Mitsuokella multacida DSM
20544]
Length = 330
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 27/98 (27%), Gaps = 15/98 (15%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MI LG+ M + ++GCG + + + + Q
Sbjct: 1 MI--LGILMLAIAVLTGCGNSQGTSSSGTAKSATSSAAQAG------KDVTIKMLNVGQG 52
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
I++ + S+V KF L
Sbjct: 53 DSILIQTAEQTVLI-------DTSDVDERDKFKRELDK 83
>gi|148978092|ref|ZP_01814633.1| hypothetical protein VSWAT3_19003 [Vibrionales bacterium SWAT-3]
gi|145962640|gb|EDK27915.1| hypothetical protein VSWAT3_19003 [Vibrionales bacterium SWAT-3]
Length = 311
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 9/94 (9%), Positives = 26/94 (27%), Gaps = 7/94 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE--FQMQL 58
M +L + T ++GC + + + V ++ +
Sbjct: 1 MKLKLLSTAIAATFLAGCSSSGSSD-----NGTTPGPQVGVADVVYNEELNTAYIIGDEG 55
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ +V G+ + + +V +
Sbjct: 56 NNAVVVGDGRGNALVTVNGEIFTIQGDVVVNANG 89
>gi|30018790|ref|NP_830421.1| hypothetical protein BC0604 [Bacillus cereus ATCC 14579]
gi|228957021|ref|ZP_04118796.1| hypothetical protein bthur0005_5540 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229108210|ref|ZP_04237832.1| hypothetical protein bcere0018_5000 [Bacillus cereus Rock1-15]
gi|229126035|ref|ZP_04255057.1| hypothetical protein bcere0015_4980 [Bacillus cereus BDRD-Cer4]
gi|229143328|ref|ZP_04271759.1| hypothetical protein bcere0012_5000 [Bacillus cereus BDRD-ST24]
gi|296501364|ref|YP_003663064.1| hypothetical protein BMB171_C0526 [Bacillus thuringiensis BMB171]
gi|29894331|gb|AAP07622.1| hypothetical Exported Protein [Bacillus cereus ATCC 14579]
gi|228640135|gb|EEK96534.1| hypothetical protein bcere0012_5000 [Bacillus cereus BDRD-ST24]
gi|228657357|gb|EEL13173.1| hypothetical protein bcere0015_4980 [Bacillus cereus BDRD-Cer4]
gi|228675226|gb|EEL30448.1| hypothetical protein bcere0018_5000 [Bacillus cereus Rock1-15]
gi|228802652|gb|EEM49494.1| hypothetical protein bthur0005_5540 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|296322416|gb|ADH05344.1| hypothetical protein BMB171_C0526 [Bacillus thuringiensis BMB171]
Length = 173
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 9/127 (7%), Positives = 35/127 (27%), Gaps = 10/127 (7%)
Query: 1 MIKELGLS-----MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--- 52
M+K + + +M +SGC ++ +K +++ + ++ ++
Sbjct: 1 MMKRISSLFFSSLLALMLILSGCAGKEQKTEKQTGNQATSVEKISDNILDEMEGPPKNGH 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF--LEKKFLPMLQLIATILNKFPSTV 110
+ + + + ++ + I L
Sbjct: 61 TIERHVGKSEEDLKNRLKTDKVSAASTYYDKETATKAVKDSLKQHDKEIQDWLKNSKEAR 120
Query: 111 IAIQSHT 117
+ + +
Sbjct: 121 LVLNTTH 127
>gi|332533605|ref|ZP_08409467.1| putative peptidase M13 family protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037007|gb|EGI73466.1| putative peptidase M13 family protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 692
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 1 MIKELGLSMFIMTTISGCG---LASREKKKVFLHKSNDTDIV 39
M K L + T I+GC ++++ + + T+
Sbjct: 1 MKKSLIAAALAATFITGCSEPQTTKTDEQQSKVATAAVTEKA 42
>gi|315126481|ref|YP_004068484.1| peptidase M13 protein [Pseudoalteromonas sp. SM9913]
gi|315014995|gb|ADT68333.1| peptidase M13 protein [Pseudoalteromonas sp. SM9913]
Length = 692
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 13/43 (30%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF 43
M K L + T I+GC K + + +
Sbjct: 1 MKKSLIAAALAATFITGCSEPQTTKTEQVAAVAEKPQATEQAE 43
>gi|304439833|ref|ZP_07399727.1| probable lipoprotein [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371572|gb|EFM25184.1| probable lipoprotein [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 284
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 7/94 (7%), Positives = 30/94 (31%), Gaps = 5/94 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K++ + + + + CG + + + + + + G + + + +
Sbjct: 1 MKKILILITCLIFLVSCGNKTDVRTENNANPKETTMSNMSSKESLGEVTETIKKYLKEED 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
D + + +H F + ++
Sbjct: 61 VDQFASLVEDYNQTIENTSLHGEFKP--EINPEY 92
>gi|298479674|ref|ZP_06997874.1| conserved hypothetical protein [Bacteroides sp. D22]
gi|298274064|gb|EFI15625.1| conserved hypothetical protein [Bacteroides sp. D22]
Length = 279
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 28/94 (29%), Gaps = 3/94 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + ++ CG +K L +R K + + L
Sbjct: 1 MMKKLIILFCGTLALAACGNGLEKKANEKL---MVAKAAYERGDYEEAKLQIDSIKILYP 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
+ G + + + +L+ F
Sbjct: 58 KAFEARKAGQALMLDVETKAQQKTLAYLDSTFQA 91
>gi|291526966|emb|CBK92552.1| hypothetical protein ERE_04540 [Eubacterium rectale M104/1]
Length = 462
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 11/105 (10%)
Query: 1 MIKELGLSMFI----MTTISGCGLASRE-KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M K+L + T ++GCG S + +K K D + F D+A +
Sbjct: 1 MKKKLVTVLLASSMVATMLAGCGSGSGDGTEKGSSAKGGDGSVYMLNFKPETDQAWQDLA 60
Query: 56 MQ-LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ +TG+ V+ + + L KK P + I
Sbjct: 61 EKYTDETGVQVT-----VVTAADGQYKTTLKSELAKKEAPTIFNI 100
>gi|257084308|ref|ZP_05578669.1| oligopeptide ABC transporter [Enterococcus faecalis Fly1]
gi|256992338|gb|EEU79640.1| oligopeptide ABC transporter [Enterococcus faecalis Fly1]
Length = 542
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|238922671|ref|YP_002936184.1| hypothetical ABC transporter extracellular binding protein
[Eubacterium rectale ATCC 33656]
gi|238874343|gb|ACR74050.1| hypothetical ABC transporter extracellular binding protein
[Eubacterium rectale ATCC 33656]
Length = 478
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 11/105 (10%)
Query: 1 MIKELGLSMFI----MTTISGCGLASRE-KKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M K+L + T ++GCG S + +K K D + F D+A +
Sbjct: 17 MKKKLVTVLLASSMVATMLAGCGSGSGDGTEKGSSAKGGDGSVYMLNFKPETDQAWQDLA 76
Query: 56 MQ-LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
+ +TG+ V+ + + L KK P + I
Sbjct: 77 EKYTDETGVQVT-----VVTAADGQYKTTLKSELAKKEAPTIFNI 116
>gi|229546320|ref|ZP_04435045.1| hypothetical protein HMPREF0349_1537 [Enterococcus faecalis
TX1322]
gi|229548426|ref|ZP_04437151.1| hypothetical protein HMPREF0345_0637 [Enterococcus faecalis ATCC
29200]
gi|255971050|ref|ZP_05421636.1| predicted protein [Enterococcus faecalis T1]
gi|256617416|ref|ZP_05474262.1| predicted protein [Enterococcus faecalis ATCC 4200]
gi|256854630|ref|ZP_05559994.1| predicted protein [Enterococcus faecalis T8]
gi|307290744|ref|ZP_07570644.1| conserved domain protein [Enterococcus faecalis TX0411]
gi|229306448|gb|EEN72444.1| hypothetical protein HMPREF0345_0637 [Enterococcus faecalis ATCC
29200]
gi|229308577|gb|EEN74564.1| hypothetical protein HMPREF0349_1537 [Enterococcus faecalis
TX1322]
gi|255962068|gb|EET94544.1| predicted protein [Enterococcus faecalis T1]
gi|256596943|gb|EEU16119.1| predicted protein [Enterococcus faecalis ATCC 4200]
gi|256710190|gb|EEU25234.1| predicted protein [Enterococcus faecalis T8]
gi|306498208|gb|EFM67725.1| conserved domain protein [Enterococcus faecalis TX0411]
gi|315030846|gb|EFT42778.1| conserved domain protein [Enterococcus faecalis TX4000]
gi|315144228|gb|EFT88244.1| conserved domain protein [Enterococcus faecalis TX2141]
gi|315156620|gb|EFU00637.1| conserved domain protein [Enterococcus faecalis TX0043]
gi|315159688|gb|EFU03705.1| conserved domain protein [Enterococcus faecalis TX0312]
gi|323479653|gb|ADX79092.1| putative lipoprotein [Enterococcus faecalis 62]
Length = 113
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQD 60
IK + +S+ + ++GC + E + + S + A E++ +
Sbjct: 31 IKMIFISLLTVAVLAGCSETAEETPQTNSPDETTAVTKSTSDTSDSETATEEDLSESEAE 90
Query: 61 TG 62
+
Sbjct: 91 SP 92
>gi|223982599|ref|ZP_03632834.1| hypothetical protein HOLDEFILI_00108 [Holdemania filiformis DSM
12042]
gi|223965436|gb|EEF69713.1| hypothetical protein HOLDEFILI_00108 [Holdemania filiformis DSM
12042]
Length = 646
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 38/120 (31%), Gaps = 17/120 (14%)
Query: 1 MIK--ELGLSM-FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K + L+ + +SGC ++++ + T I G L +
Sbjct: 6 MKKVLKTVLAFGLAASLLSGCSQSAKQPEGQTYQAGTYTGISENGKGGKLALTMEFSDQA 65
Query: 58 LQDTGIV------------VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
+ + + +I I +++ +S + +L+ A + +
Sbjct: 66 IISAEVTEHHETPNISDAPLEQIPQQIVDQQSLNIDVISGATITSDA--ILEAAADAVRQ 123
>gi|163942277|ref|YP_001647161.1| periplasmic binding protein [Bacillus weihenstephanensis KBAB4]
gi|163864474|gb|ABY45533.1| periplasmic binding protein [Bacillus weihenstephanensis KBAB4]
Length = 291
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K + + + +D E +
Sbjct: 1 MKKIVSVLMAIILLVSIAGCSSPKKETAKQVKSEGKERIVATTVAVTEIMDALEVDL 57
>gi|68248655|ref|YP_247767.1| putative lipoprotein [Haemophilus influenzae 86-028NP]
gi|68056854|gb|AAX87107.1| conserved putative lipoprotein [Haemophilus influenzae 86-028NP]
gi|309750576|gb|ADO80560.1| conserved hypothetical protein p31 [Haemophilus influenzae R2866]
Length = 209
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA-EDEFQMQLQD 60
+K+ L+ F + +SGC + + ++ + + D+ + Q
Sbjct: 1 MKKFLLTTFALVVLSGCAHKQQTADEQQALENPNIQQGQHQVLQPEDRIVRPDIYTDYQP 60
Query: 61 TGIVVSRIGDMITCYIP 77
V R G
Sbjct: 61 ERTEVLREGRYTLINFS 77
>gi|315579641|gb|EFU91832.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0630]
Length = 542
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|315174940|gb|EFU18957.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX1346]
Length = 542
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|315151761|gb|EFT95777.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0012]
Length = 542
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|307290270|ref|ZP_07570186.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0411]
gi|306498691|gb|EFM68192.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0411]
gi|315030454|gb|EFT42386.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX4000]
Length = 542
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|256961028|ref|ZP_05565199.1| oligopeptide ABC transporter [Enterococcus faecalis Merz96]
gi|293384582|ref|ZP_06630448.1| TraC protein [Enterococcus faecalis R712]
gi|293386811|ref|ZP_06631382.1| TraC protein [Enterococcus faecalis S613]
gi|312906408|ref|ZP_07765416.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis DAPTO 512]
gi|312979433|ref|ZP_07791121.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis DAPTO 516]
gi|256951524|gb|EEU68156.1| oligopeptide ABC transporter [Enterococcus faecalis Merz96]
gi|291078128|gb|EFE15492.1| TraC protein [Enterococcus faecalis R712]
gi|291083814|gb|EFE20777.1| TraC protein [Enterococcus faecalis S613]
gi|310627562|gb|EFQ10845.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis DAPTO 512]
gi|311287804|gb|EFQ66360.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis DAPTO 516]
Length = 542
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|256616774|ref|ZP_05473620.1| oligopeptide ABC transporter [Enterococcus faecalis ATCC 4200]
gi|257421662|ref|ZP_05598652.1| pheromone binding protein [Enterococcus faecalis X98]
gi|256596301|gb|EEU15477.1| oligopeptide ABC transporter [Enterococcus faecalis ATCC 4200]
gi|257163486|gb|EEU93446.1| pheromone binding protein [Enterococcus faecalis X98]
gi|315032574|gb|EFT44506.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0017]
gi|315143884|gb|EFT87900.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX2141]
gi|315148687|gb|EFT92703.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX4244]
gi|315155588|gb|EFT99604.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0043]
Length = 542
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|255971876|ref|ZP_05422462.1| predicted protein [Enterococcus faecalis T1]
gi|255962894|gb|EET95370.1| predicted protein [Enterococcus faecalis T1]
Length = 542
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|229549158|ref|ZP_04437883.1| oligopeptide ABC superfamily ATP binding cassette transporter,
binding protein [Enterococcus faecalis ATCC 29200]
gi|229305712|gb|EEN71708.1| oligopeptide ABC superfamily ATP binding cassette transporter,
binding protein [Enterococcus faecalis ATCC 29200]
gi|323481648|gb|ADX81087.1| Oligopeptide ABC transporter, substrate binding protein
[Enterococcus faecalis 62]
Length = 542
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|138895090|ref|YP_001125543.1| carboxypeptidase [Geobacillus thermodenitrificans NG80-2]
gi|134266603|gb|ABO66798.1| Carboxypeptidase [Geobacillus thermodenitrificans NG80-2]
Length = 275
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 10/104 (9%), Positives = 31/104 (29%), Gaps = 9/104 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV--------NKRFGSSLDKAED 52
M + ++M ++GC + + + +D +
Sbjct: 1 MNQRWKIAMLACLLLAGCQTGESGDRSSVGSSEQPPESAVQPGSHEPGETDQHPVDPVDP 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSE-VFLEKKFLPM 95
+ Q++ + ++ G + + V++ L + P
Sbjct: 61 DLQLEAKYWNVIKVENGKKVIMNPDNILVLVNKEQSLPPSYKPA 104
>gi|29377203|ref|NP_816357.1| pheromone binding protein [Enterococcus faecalis V583]
gi|227554211|ref|ZP_03984258.1| oligopeptide ABC superfamily ATP binding cassette transporter,
binding protein [Enterococcus faecalis HH22]
gi|307288655|ref|ZP_07568636.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0109]
gi|29344669|gb|AAO82427.1| pheromone binding protein [Enterococcus faecalis V583]
gi|227176658|gb|EEI57630.1| oligopeptide ABC superfamily ATP binding cassette transporter,
binding protein [Enterococcus faecalis HH22]
gi|306500409|gb|EFM69745.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0109]
gi|315162111|gb|EFU06128.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0645]
gi|315165294|gb|EFU09311.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX1302]
gi|315573764|gb|EFU85955.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0309B]
gi|315580278|gb|EFU92469.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0309A]
Length = 542
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|330981099|gb|EGH79202.1| hypothetical protein PSYAP_21407 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 994
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 807 DLGSVSFAPGASDLSAEAQKALDKLSVALKERPDLKLEIEG 847
>gi|331002337|ref|ZP_08325855.1| hypothetical protein HMPREF0491_00717 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330410153|gb|EGG89587.1| hypothetical protein HMPREF0491_00717 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 399
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Query: 1 MIKELGLSMFIM---TTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD 48
M K + LS + +S CG + +K K+ + + D
Sbjct: 1 MKKRVLLSALALTFGLALSACGNSGSDKGADSGSKAETAAADSGSKAETAD 51
>gi|283798957|ref|ZP_06348110.1| conserved hypothetical protein [Clostridium sp. M62/1]
gi|291073292|gb|EFE10656.1| conserved hypothetical protein [Clostridium sp. M62/1]
Length = 203
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 13/156 (8%), Positives = 41/156 (26%), Gaps = 9/156 (5%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L + + ++GC K ++ I+N++ + +K + L
Sbjct: 1 MKKLIKYMMLFLCILLMTGCSNKKSVGGKNITTANSVDKIINEQINNE-NKDKTTDNKNL 59
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATIL----NKFPSTVIAI 113
+ + I + + + L + ++ + ++ I
Sbjct: 60 LSSNDSSKGTENTIKDTEGTQKTKGTVDYDLTQMSSDLVYATVYQMMVTPEEYEGKTFRI 119
Query: 114 QSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSN 149
+ + + Q
Sbjct: 120 DGNFYATYYEATKKYYFYCVIQDATACCAQGMEFVW 155
>gi|223985651|ref|ZP_03635699.1| hypothetical protein HOLDEFILI_03005 [Holdemania filiformis DSM
12042]
gi|223962342|gb|EEF66806.1| hypothetical protein HOLDEFILI_03005 [Holdemania filiformis DSM
12042]
Length = 682
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 9/91 (9%)
Query: 2 IKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+L LS+ + +++ C A E + V + DK
Sbjct: 8 MKKLIISILSLLMAVSLTACSSAKEETFEGSAQG--YGGTVTAKVTFKADKITAVEVKAP 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
+T +G +P + + ++
Sbjct: 66 DET----EGVGSRAAEELPEKIVAANSADVD 92
>gi|163790064|ref|ZP_02184499.1| hypothetical protein CAT7_10440 [Carnobacterium sp. AT7]
gi|159874764|gb|EDP68833.1| hypothetical protein CAT7_10440 [Carnobacterium sp. AT7]
Length = 635
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Query: 1 MIKEL----GLSMFIMTTISGC-GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M K+ LS+ ++ ++GC AS + + ++ V L+ + D+ +
Sbjct: 1 MKKKTKITPFLSLAVLVMLAGCQSTASGTSQSADSATATESGTVKSTVDYDLEFSSDDLE 60
Query: 56 MQLQDTGIVVSRIGD 70
+ + ++ D
Sbjct: 61 VGYDEADSTTIQLAD 75
>gi|172057233|ref|YP_001813693.1| Beta-N-acetylhexosaminidase [Exiguobacterium sibiricum 255-15]
gi|171989754|gb|ACB60676.1| Beta-N-acetylhexosaminidase [Exiguobacterium sibiricum 255-15]
Length = 412
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 34/99 (34%), Gaps = 8/99 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + + ++GC + + + T S+ ++AE + + + +
Sbjct: 1 MKRMVPVLLASVLLAGCADEPAQPVEPQPKPAKKTKPPQPDRPSAAERAEKQLKETVSNM 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIA 100
++ ++ + + L + +LQ A
Sbjct: 61 S-TAEKVDQLLYIGV-------TGTALTQADRTLLQDHA 91
>gi|307700643|ref|ZP_07637671.1| bacterial extracellular solute-binding protein, family 5
[Mobiluncus mulieris FB024-16]
gi|307614173|gb|EFN93414.1| bacterial extracellular solute-binding protein, family 5
[Mobiluncus mulieris FB024-16]
Length = 552
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 21/162 (12%)
Query: 1 MIKELG----LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQ 55
M K+L L+ + T+S CG AS + K K TD V +
Sbjct: 1 MKKKLLSTMALTAAMALTLSACGGASADTDKKADDKPVKTDAVITVNNTEPQHPLIPGNT 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
++ ++ D I + + ++K L +A + + I+
Sbjct: 61 NEVAGGLVI-----DHIYAGLQSY---------DEKGETQL-EMAESIKSDDNQTWTIKI 105
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
D + + + + Q VS++ F SV G+
Sbjct: 106 KPDQKFSDGSAVNAKSFVDAW-NQTVKQNMVSASFFESVEGY 146
>gi|262378808|ref|ZP_06071965.1| predicted protein [Acinetobacter radioresistens SH164]
gi|262300093|gb|EEY88005.1| predicted protein [Acinetobacter radioresistens SH164]
Length = 217
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 4/47 (8%), Positives = 13/47 (27%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD 48
+K+L ++ + T ++ C + +
Sbjct: 28 MKKLIITAALFTLLTACSKTPESPASAANSEHESVSSDDSAIKDETK 74
>gi|317047594|ref|YP_004115242.1| hypothetical protein Pat9b_1365 [Pantoea sp. At-9b]
gi|316949211|gb|ADU68686.1| protein of unknown function DUF330 [Pantoea sp. At-9b]
Length = 188
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 11/97 (11%), Positives = 27/97 (27%), Gaps = 7/97 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS--LDKAEDEFQMQLQ 59
+K+ GL + + ++GC + + ++ L + L
Sbjct: 1 MKK-GLMIGALLLLAGCSSTVETTYYQLPAGAAVAPVSSEASSQQPMLWVQQISVPDYLA 59
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
G+V + L+++ L
Sbjct: 60 GNGLVYQTSDVKYVIAANNLWA----SPLDQQLQQTL 92
>gi|255318582|ref|ZP_05359815.1| hypothetical protein ACIRA0001_2553 [Acinetobacter radioresistens
SK82]
gi|255304574|gb|EET83758.1| hypothetical protein ACIRA0001_2553 [Acinetobacter radioresistens
SK82]
Length = 190
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 4/47 (8%), Positives = 13/47 (27%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD 48
+K+L ++ + T ++ C + +
Sbjct: 1 MKKLIITAALFTLLTACSKTPESPASAANSEHESVSSDDSAIKDETK 47
>gi|229012724|ref|ZP_04169894.1| VanW [Bacillus mycoides DSM 2048]
gi|228748559|gb|EEL98414.1| VanW [Bacillus mycoides DSM 2048]
Length = 303
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 47/170 (27%), Gaps = 21/170 (12%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK + + + + +SGCG + + +D + D D + T
Sbjct: 5 IKGILVGVLCVAVVSGCGTKVSDV-------ALVSDFGGNVVEAKADVQ-DSISLVDGRT 56
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
G V + + F E KF + +A + K +
Sbjct: 57 GTEVKK------IDLSSLGYFEDEA----KFKKSVTKVAGEVGKSVDKKMVPSRIASDGS 106
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +++ L S+ + + K P T G
Sbjct: 107 WQEGKPSFELMEKELVDKLLNVGMWDSSYQLPIV---EKKPTATLSDAQG 153
>gi|261409735|ref|YP_003245976.1| hypothetical protein GYMC10_5964 [Paenibacillus sp. Y412MC10]
gi|261286198|gb|ACX68169.1| hypothetical protein GYMC10_5964 [Paenibacillus sp. Y412MC10]
Length = 197
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 32/108 (29%), Gaps = 20/108 (18%)
Query: 1 MIKELGL---SMFIMTTISGCGLASRE---KKKVFLHKSNDTDIVN-----------KRF 43
M K++ L +F M + C + + + S +TD +
Sbjct: 1 MNKKIMLVSAVLFSMLLTAACSSNQADPPAETPPAVVDSEETDQTGAAEEEPPAEPSQGE 60
Query: 44 GSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
G D E + + G V G + + +L+ +
Sbjct: 61 GQPADG-ETKPIDEPAAVGDTVDYHG--AVITLNGVRDSEGDEYLKPQ 105
>gi|157964090|ref|YP_001498914.1| protein-disulfide isomerase [Rickettsia massiliae MTU5]
gi|157843866|gb|ABV84367.1| Protein-disulfide isomerase [Rickettsia massiliae MTU5]
Length = 282
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 12/126 (9%), Positives = 36/126 (28%), Gaps = 8/126 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++ + + + + +S C + KK + + + + S E ++
Sbjct: 3 MRSIFIVLIFLLFLSSCSEEKAQDKKHEEKQIIEHETLQNNETSKETNQEAVNSENTAES 62
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPM-----LQLIATILNKFPSTVIAIQSH 116
+ + P + P+ + +L S VI ++
Sbjct: 63 IVPANDNNQTDEVSTPASQEQEPK---NPAIKPVKVTFKVDDNDMVLGNKKSNVIVVEYF 119
Query: 117 TDSIGT 122
+ +
Sbjct: 120 SPTCPH 125
>gi|118591130|ref|ZP_01548529.1| hypothetical protein SIAM614_15927 [Stappia aggregata IAM 12614]
gi|118436206|gb|EAV42848.1| hypothetical protein SIAM614_15927 [Stappia aggregata IAM 12614]
Length = 316
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124
V D + + VS+ L+++ L+ L K I+I + G
Sbjct: 6 VVDHRDGVITLARLQYFDVSQANLKEEHKNWLRRNVVPLLKGNG-SISIVGLSSRSGKAA 64
Query: 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK 160
N +S +RA+ +KS+L + +S F V G
Sbjct: 65 FNKALSMKRANAVKSFLEECLLSCFPFDLVDGLGES 100
>gi|89076331|ref|ZP_01162668.1| putative thiol-disulfide isomerase [Photobacterium sp. SKA34]
gi|89047963|gb|EAR53553.1| putative thiol-disulfide isomerase [Photobacterium sp. SKA34]
Length = 259
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 47/160 (29%), Gaps = 19/160 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK------------ 49
+K+L L + + ++GC + K F + + K + +
Sbjct: 1 MKKLILPLMVTALLAGCNDTTAVNNKDFSPEQK--AQIEKIASQYIIEHPEVLVKASETL 58
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK-KFLP----MLQLIATILN 104
+ + + Q+Q V D + + + +F I+ I+
Sbjct: 59 QKQQMEKQVQSAKQTVVTYADQLIKDAKTPYVGPKDAKVNVIEFFDYQCMFCSKISPIVK 118
Query: 105 KFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQR 144
+ + ++ + S+ AD+ +
Sbjct: 119 QLETENPDVKFIFKETPIFASRWEASKYAADMGNWIFAHK 158
>gi|298372470|ref|ZP_06982460.1| poly(hydroxyalcanoate) granule associated protein [Bacteroidetes
oral taxon 274 str. F0058]
gi|298275374|gb|EFI16925.1| poly(hydroxyalcanoate) granule associated protein [Bacteroidetes
oral taxon 274 str. F0058]
Length = 170
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ-MQLQD 60
+K+LGL + + CG +++ ++ L D + K D E + + D
Sbjct: 6 MKKLGLIVLTAAVMVACGNKAKDAEQARLDSIARADSIAKVEAMRTDSIEKAAEAQAMVD 65
Query: 61 TGIVVSRIGDMI 72
+ D I
Sbjct: 66 SMAKAQATADSI 77
>gi|225568833|ref|ZP_03777858.1| hypothetical protein CLOHYLEM_04912 [Clostridium hylemonae DSM
15053]
gi|225162332|gb|EEG74951.1| hypothetical protein CLOHYLEM_04912 [Clostridium hylemonae DSM
15053]
Length = 348
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Query: 1 MIKELGLSMFI----MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
M K L + + MT ++ C + EK ++ K +L++
Sbjct: 1 MKKRLLAVLLVAVMGMTMLAACSSSKEEKDTKDAAETAGETKEQKTVDVTLNEVA 55
>gi|167753681|ref|ZP_02425808.1| hypothetical protein ALIPUT_01962 [Alistipes putredinis DSM
17216]
gi|167658306|gb|EDS02436.1| hypothetical protein ALIPUT_01962 [Alistipes putredinis DSM
17216]
Length = 141
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 19/52 (36%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
+K + L + ++ CG SR+K + ++ + G+
Sbjct: 1 MKNILLILAAAIMLTACGGNSRQKTTAGVPDMHNAENALDYQGTYKGVFPAA 52
>gi|160935362|ref|ZP_02082744.1| hypothetical protein CLOBOL_00257 [Clostridium bolteae ATCC
BAA-613]
gi|158441720|gb|EDP19420.1| hypothetical protein CLOBOL_00257 [Clostridium bolteae ATCC
BAA-613]
Length = 653
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 9/90 (10%), Positives = 24/90 (26%), Gaps = 3/90 (3%)
Query: 2 IKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K G++ + + ++GC + + + + D +
Sbjct: 11 LKIFGIAAGLAGVLFLAGCTKTAGQDGSKAGAAGTSETAGIQEAAGTQDTNRTDADSSF- 69
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLE 89
G G+ T I + +
Sbjct: 70 GDGEETRITGNGTTVAIEGTGAAADGANVT 99
>gi|153833341|ref|ZP_01986008.1| putative lipoprotein [Vibrio harveyi HY01]
gi|148870350|gb|EDL69276.1| putative lipoprotein [Vibrio harveyi HY01]
Length = 189
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 45/139 (32%), Gaps = 11/139 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA---EDEFQMQ 57
M + L + I ++GC A + +++ + V+ + + E
Sbjct: 1 MKRRL---LLISALLAGCSSAPEDSGALYVLPEASSAKVSDTAIAQRPQLVVRPVELASY 57
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
L D+GIV I + + ++ + L+ + + + +
Sbjct: 58 LADSGIVYRTSETKIVQAKHNQWAHNISEQITQRIIDELRS-----KQSQYWPVEVNNLL 112
Query: 118 DSIGTLKNNLLISQERADV 136
D G K L +S+
Sbjct: 113 DQSGESKLLLSLSKFNGSY 131
>gi|325197837|gb|ADY93293.1| putative putrescene ABC transporter, periplasmic putrescine-binding
protein [Neisseria meningitidis G2136]
gi|325207667|gb|ADZ03119.1| putative putrescene ABC transporter, periplasmic putrescine-binding
protein [Neisseria meningitidis NZ-05/33]
Length = 379
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 30/114 (26%), Gaps = 5/114 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL-Q 59
M K L + + ++ CG S + K + D + E +
Sbjct: 1 MKKTLVAAAILSLALTACGGGSDTAAQTPSAKPEAGQSGKLNIYNWSDYVDPETVAAFEK 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSF-VSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
+TGI + V S L P + + + I
Sbjct: 61 ETGIKTRSDYYDSNETLEAKVLTGKSGYDLTA---PSIANVGRQIKAGAYQKID 111
>gi|325288136|ref|YP_004263926.1| nitroreductase [Cellulophaga lytica DSM 7489]
gi|324323590|gb|ADY31055.1| nitroreductase [Cellulophaga lytica DSM 7489]
Length = 250
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 25/69 (36%), Gaps = 4/69 (5%)
Query: 1 MIKELGLSMFIMT-TISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+ L + + ++ C +E+ + T I+ KA D+ +
Sbjct: 1 MMKKTILILTVGVGLLAACTSKEKEE---TTKNAVGTQIIEDLSNRYTSKAYDKTKRVSA 57
Query: 60 DTGIVVSRI 68
+ + +
Sbjct: 58 EDLATIEEV 66
>gi|323694403|ref|ZP_08108575.1| hypothetical protein HMPREF9475_03439 [Clostridium symbiosum
WAL-14673]
gi|323501550|gb|EGB17440.1| hypothetical protein HMPREF9475_03439 [Clostridium symbiosum
WAL-14673]
Length = 349
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 11/98 (11%), Positives = 25/98 (25%), Gaps = 8/98 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDI-----VNKRFGSSLDKAEDEFQM 56
K LG ++ M +S C + G+ + E
Sbjct: 5 KKLLGTAVAAMLALSACSSQPTTPVAPTGESGPENTAELQTEAKANEGTDNEVLEAP--E 62
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFL 93
+++ + I + S+ ++ F
Sbjct: 63 KVKGETLEAEDIDPNGGADLNGANDHKVSKYWVNPDFY 100
>gi|294787634|ref|ZP_06752878.1| cytochrome c oxidase, Cbb3-type, subunit III [Simonsiella muelleri
ATCC 29453]
gi|294483927|gb|EFG31610.1| cytochrome c oxidase, Cbb3-type, subunit III [Simonsiella muelleri
ATCC 29453]
Length = 478
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 51/167 (30%), Gaps = 18/167 (10%)
Query: 21 ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHV 80
+ E KK ++ + + + + + +
Sbjct: 323 TAEEPKKAAEPAASAPVVAVSAPAVAASEPTPVVAASEVQAAPAADKAEVRVENGVVKFY 382
Query: 81 SFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSY 140
V + + + + I TDS G N +S+ RA +++Y
Sbjct: 383 FAVGKSAIAANAEKATGEVVKAAKA--GKKLVISGFTDSTGNAVANEKLSKNRAQAVQAY 440
Query: 141 LIQRGVSSNRFI-----SVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
LI++GV + + S G + G +R+E++I
Sbjct: 441 LIKQGVKKDSMVLRKPESSVG-------AKGNNAEG----RRVEVKI 476
>gi|294635640|ref|ZP_06714116.1| putative outer membrane protein [Edwardsiella tarda ATCC 23685]
gi|291091023|gb|EFE23584.1| putative outer membrane protein [Edwardsiella tarda ATCC 23685]
Length = 189
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 22/75 (29%), Gaps = 3/75 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS--SLDKAEDEFQMQL 58
M+K G+ + +S C A ++ + + V + L L
Sbjct: 1 MMKR-GMILLAALVLSACSGAGSKQYYQLPVEPAVSRAVTQTAAQTHQLWVQPVNVADLL 59
Query: 59 QDTGIVVSRIGDMIT 73
G+V +
Sbjct: 60 GGMGVVYQQSDVQFV 74
>gi|161984978|ref|YP_406869.2| hypothetical protein SBO_0328 [Shigella boydii Sb227]
gi|320186063|gb|EFW60808.1| Hypothetical lipoprotein YajG precursor [Shigella flexneri CDC
796-83]
gi|332098581|gb|EGJ03547.1| hypothetical protein SB359474_0338 [Shigella boydii 3594-74]
Length = 192
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 1 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQIVTLAASRDLRF 78
>gi|170728421|ref|YP_001762447.1| hypothetical protein Swoo_4096 [Shewanella woodyi ATCC 51908]
gi|169813768|gb|ACA88352.1| hypothetical protein Swoo_4096 [Shewanella woodyi ATCC 51908]
Length = 147
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 2/110 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MIK+ L + +S CG A++ K + +L K+ + + ++D + +
Sbjct: 1 MIKKYFLISGCVLALSACGDATQSKIENYLTKAASKEGYQLKDVENIDGSYYATVKITNN 60
Query: 61 TGIVVSRIGDMITCYIPV-HVSFVSEVFLEKKFLPMLQLIATI-LNKFPS 108
+ MI F LE + + + +N P
Sbjct: 61 EINTFENMYQMIQSNRSNIENYFAQVDELESAYSKKMNNLCPPTMNDNPQ 110
>gi|331085148|ref|ZP_08334234.1| hypothetical protein HMPREF0987_00537 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330407931|gb|EGG87421.1| hypothetical protein HMPREF0987_00537 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 308
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/143 (11%), Positives = 38/143 (26%), Gaps = 24/143 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + L L ++ +SGC + S T++V D+ + ++
Sbjct: 1 MKRFLALICTMLILLSGCTDIQSTPEDTTKESSVQTEVVESNE----DEEQAAEGTEISA 56
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ D ++++ A L+ + + +
Sbjct: 57 ESASIETTED--------------------DGYRVIEVAAGDLSGYREANVKVDIGFGDR 96
Query: 121 GTLKNNLLISQERADVIKSYLIQ 143
Q K ++Q
Sbjct: 97 EYWAYTNEYGQLVRVTAKQIILQ 119
>gi|312900086|ref|ZP_07759403.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0470]
gi|311292843|gb|EFQ71399.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0470]
Length = 542
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|257087693|ref|ZP_05582054.1| oligopeptide ABC transporter [Enterococcus faecalis D6]
gi|256995723|gb|EEU83025.1| oligopeptide ABC transporter [Enterococcus faecalis D6]
gi|315025508|gb|EFT37440.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX2137]
Length = 542
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|256854024|ref|ZP_05559389.1| pheromone binding protein [Enterococcus faecalis T8]
gi|256710967|gb|EEU26010.1| pheromone binding protein [Enterococcus faecalis T8]
Length = 542
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|288934987|ref|YP_003439046.1| lipoprotein [Klebsiella variicola At-22]
gi|288889696|gb|ADC58014.1| putative lipoprotein [Klebsiella variicola At-22]
Length = 110
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 12/101 (11%), Positives = 28/101 (27%), Gaps = 9/101 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L + + + ISGC + + + + K E +Q+
Sbjct: 1 MKKLMIVIAGVLAISGCATKQYPQAPSVTSEE------SAALDCNAIKQEIAKTHSIQNE 54
Query: 62 GIVVSRIGDMITCYIPVHVSFVS---EVFLEKKFLPMLQLI 99
+ + + +K LQ +
Sbjct: 55 IETTGQFDGRTVLGALGDFGIGNGMAKSEARRKAQARLQQL 95
>gi|269964367|ref|ZP_06178609.1| hypothetical protein VMC_00390 [Vibrio alginolyticus 40B]
gi|269830864|gb|EEZ85081.1| hypothetical protein VMC_00390 [Vibrio alginolyticus 40B]
Length = 172
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 5/78 (6%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKS----NDTDIVNKRFGSSLDKAEDEFQM 56
M++ L L + +M +S C + + K + + + E
Sbjct: 1 MMRGLILGLVVML-VSACTTVTTDVDKQADFSAYRTFDFGAQAEAPTSIDGRRIEQGLAE 59
Query: 57 QLQDTGIVVSRIGDMITC 74
QL+ G++ G +
Sbjct: 60 QLEGKGLIKVNSGGDLYV 77
>gi|256957952|ref|ZP_05562123.1| extracellular solute-binding protein [Enterococcus faecalis DS5]
gi|300860158|ref|ZP_07106245.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TUSoD Ef11]
gi|256948448|gb|EEU65080.1| extracellular solute-binding protein [Enterococcus faecalis DS5]
gi|300849197|gb|EFK76947.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TUSoD Ef11]
gi|315035097|gb|EFT47029.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0027]
Length = 542
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|227486594|ref|ZP_03916910.1| possible thiamine biosynthesis lipoprotein [Anaerococcus
lactolyticus ATCC 51172]
gi|227235412|gb|EEI85427.1| possible thiamine biosynthesis lipoprotein [Anaerococcus
lactolyticus ATCC 51172]
Length = 377
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 3/95 (3%)
Query: 2 IKELGLSMFIMTTISGCGLA--SREKKKVFLHKSNDTDIVNKRFGSSLDKAE-DEFQMQL 58
+K+L + + + T+++ C S EK KV K + + K S + E +
Sbjct: 1 MKKLLMILALATSLTACANTKESVEKPKVEAVKEDSSQEEGKNTDSGEEVNNSGELEKHT 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
++ I + I L+ +
Sbjct: 61 ENIYEYFDTITNFIAYTKDQEEFDHYVKVLKDELK 95
>gi|261400463|ref|ZP_05986588.1| iron transporter, outer membrane receptor family [Neisseria
lactamica ATCC 23970]
gi|269209721|gb|EEZ76176.1| iron transporter, outer membrane receptor family [Neisseria
lactamica ATCC 23970]
Length = 499
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 20/67 (29%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K ++M + +S CG V + + ED Q Q
Sbjct: 16 MFKRSVIAMACIVALSACGGGGGGSPDVKSADTLSKPAAPVVAEKETEVKEDAPQAGSQG 75
Query: 61 TGIVVSR 67
G ++
Sbjct: 76 QGAPSTQ 82
>gi|23100843|ref|NP_694310.1| ABC transporter permease [Oceanobacillus iheyensis HTE831]
gi|22779077|dbj|BAC15344.1| ABC transporter permease [Oceanobacillus iheyensis HTE831]
Length = 374
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 9/116 (7%), Positives = 31/116 (26%), Gaps = 19/116 (16%)
Query: 2 IKE-----LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+K L + ++ CG + ++ + + + ++ D
Sbjct: 1 MKNHKFLLFVLVLTFGLFLAACGSSDEGEESDAGAEGTEEGTSGEGEATASDDYSIAMVT 60
Query: 57 QLQD-----------TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIAT 101
+ GI + ++ + ++ + ++P L
Sbjct: 61 DIGGVDDKSFNQSAWEGITAWGEVNGLS---QGNGFDYAQSSDKADYMPNLTRFVR 113
>gi|163940947|ref|YP_001645831.1| hypothetical protein BcerKBAB4_3022 [Bacillus weihenstephanensis
KBAB4]
gi|163863144|gb|ABY44203.1| hypothetical protein BcerKBAB4_3022 [Bacillus weihenstephanensis
KBAB4]
Length = 141
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 3/94 (3%)
Query: 1 MIKELGLSM-FIMTTISGCGLASREKKK--VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ L++ + ++ CG +K+ + T+ + E +
Sbjct: 1 MMKKSVLAVGLSVAMLAACGEKKVVQKEKPKAQQTTAKTEQPKNEQTRMMKSFERRTKEI 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ G V+ + V FV + L
Sbjct: 61 KEYFGGTVTAGELKKENNLYVLYVFVDKTALSNA 94
>gi|332671366|ref|YP_004454374.1| basic membrane lipoprotein [Cellulomonas fimi ATCC 484]
gi|332340404|gb|AEE46987.1| basic membrane lipoprotein [Cellulomonas fimi ATCC 484]
Length = 364
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Query: 1 MIKELGLSMF---IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K + ++ + T++ CG A E ++ S +D+ Q
Sbjct: 1 MKKIIRVAALGGAVALTLAACGSAPEETEETAGTGDAAASDFKACIVSDAGGFDDKSFNQ 60
Query: 58 LQDTG 62
L G
Sbjct: 61 LSYEG 65
>gi|323441254|gb|EGA98927.1| putative lipoprotein [Staphylococcus aureus O46]
Length = 52
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 15/39 (38%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV 39
M+K+ L + +SGC + E K + +
Sbjct: 1 MLKKAKLILIATLLLSGCSTTNNESNKETKSVPEEMEAS 39
>gi|229014707|ref|ZP_04171816.1| hypothetical protein bmyco0001_51040 [Bacillus mycoides DSM 2048]
gi|228746585|gb|EEL96479.1| hypothetical protein bmyco0001_51040 [Bacillus mycoides DSM 2048]
Length = 141
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 3/94 (3%)
Query: 1 MIKELGLSM-FIMTTISGCGLASREKKK--VFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M+K+ L++ + ++ CG +K+ + T+ + E +
Sbjct: 1 MMKKSVLAVGLSVAMLAACGEKEVVQKEKPKAQQTTAKTEQPKDEQTRMMKSFERRTKEI 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ G V+ + V FV + L
Sbjct: 61 KEYFGGTVTAGELKKENNLYVLYVFVDKTALSNA 94
>gi|223984365|ref|ZP_03634505.1| hypothetical protein HOLDEFILI_01799 [Holdemania filiformis DSM
12042]
gi|223963660|gb|EEF68032.1| hypothetical protein HOLDEFILI_01799 [Holdemania filiformis DSM
12042]
Length = 311
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 17/54 (31%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+K L + + I+GC + T+ G+S + +
Sbjct: 34 LKHLSVLLACAGLIAGCSTKPAAQPSAAPQDQTSTEKTVITIGASTSPHAEILE 87
>gi|70732594|ref|YP_262357.1| hypothetical protein PFL_5285 [Pseudomonas fluorescens Pf-5]
gi|68346893|gb|AAY94499.1| Domain of Unknown Function (DUF748) family [Pseudomonas fluorescens
Pf-5]
Length = 976
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/45 (15%), Positives = 15/45 (33%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ L K+ L +A L + P+ + I+ +
Sbjct: 789 DLSNVSFAPGSSDLSKESESALTTLAKALKERPTLRLEIEGTSAQ 833
>gi|46578930|ref|YP_009738.1| flagellar basal body L-ring protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603469|ref|YP_967869.1| flagellar basal body L-ring protein [Desulfovibrio vulgaris DP4]
gi|81567114|sp|Q72EQ4|FLGH_DESVH RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|166214820|sp|A1VG76|FLGH_DESVV RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|46448342|gb|AAS94997.1| flagellar L-ring protein FlgH [Desulfovibrio vulgaris str.
Hildenborough]
gi|120563698|gb|ABM29442.1| flagellar L-ring protein [Desulfovibrio vulgaris DP4]
gi|311232788|gb|ADP85642.1| flagellar L-ring protein [Desulfovibrio vulgaris RCH1]
Length = 238
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 36/91 (39%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
MI++ + + ++GC A ++ + T + ++ ++ ++ + L
Sbjct: 1 MIRKTLAASCAVLLMAGCNAARQQASPLPPVAPPQTYVEPEQAAANPGSMFNDAEADLMF 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
+ R+GD++ I + ++ +
Sbjct: 61 SDSRARRVGDIVLVKIVENAKAKNKADTTSE 91
>gi|310657921|ref|YP_003935642.1| phosphate ABC transporter phosphate-binding protein [Clostridium
sticklandii DSM 519]
gi|308824699|emb|CBH20737.1| phosphate abc transporter, phosphate-binding protein [Clostridium
sticklandii]
Length = 332
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 16/120 (13%), Positives = 35/120 (29%), Gaps = 15/120 (12%)
Query: 2 IKELGLSMFIMTTISG---CGLASRE-KKKVFLHKSNDTDIVNKRFGSSLDK-------- 49
+K+ ++ + + G C S E + S +++ +
Sbjct: 1 MKKWMAALLAVALMVGTVGCAGTSSESEGTQEEVASEASELSGQVIVDGSGTVYPLMANI 60
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCY--IPVHVSFVSEV-FLEKKFLPMLQLIATILNKF 106
AE+ + V R G IP + F ++ + L+ L +
Sbjct: 61 AENYMTSVQPGVSVQVGRAGSSAGFKKFIPGELDFADASRAIKDEEKAQLEEKGMKLGEN 120
>gi|294056617|ref|YP_003550275.1| hypothetical protein Caka_3092 [Coraliomargarita akajimensis DSM
45221]
gi|293615950|gb|ADE56105.1| hypothetical protein Caka_3092 [Coraliomargarita akajimensis DSM
45221]
Length = 191
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 6/91 (6%), Positives = 27/91 (29%), Gaps = 4/91 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ ++ ++ ++GCG ++ + L++ + +
Sbjct: 1 MKQILPTLILIALLAGCGKQHEPSSSESPVPETESPSQASESSAELEELSALLK---KGG 57
Query: 62 GIVVSRI-GDMITCYIPVHVSFVSEVFLEKK 91
V + + + ++
Sbjct: 58 AQDVKLDVDERSRIEALLKLVLPDSQYIGSD 88
>gi|288556862|ref|YP_003428797.1| phosphonate ABC transporter periplasmic phosphonate-binding protein
[Bacillus pseudofirmus OF4]
gi|288548022|gb|ADC51905.1| phosphonate ABC transporter, periplasmic phosphonate-binding
protein [Bacillus pseudofirmus OF4]
Length = 310
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 30/102 (29%), Gaps = 14/102 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTD-------------IVNKRFGSSLD 48
+K+ LS+ + T+S CG S+ + + L
Sbjct: 1 MKKWLLSIGLALTLSACGSGEDAPSTDEADTSSGGETSDEVFEVAVIPSQSTGEMETGLS 60
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
E L + V++ + ++ + + FL
Sbjct: 61 NLESHLTDAL-GREVEVNQYPNYNAVVEALNYNHIDLAFLGP 101
>gi|262368868|ref|ZP_06062197.1| curli production assembly/transport component CsgG [Acinetobacter
johnsonii SH046]
gi|262316546|gb|EEY97584.1| curli production assembly/transport component CsgG [Acinetobacter
johnsonii SH046]
Length = 223
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/39 (17%), Positives = 12/39 (30%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV 39
M K + L++ +S C K + V
Sbjct: 1 MNKSIFLAVLSGLALSACSTTETSKTIQSPQVTAAVATV 39
>gi|290892986|ref|ZP_06555976.1| conserved hypothetical protein [Listeria monocytogenes FSL
J2-071]
gi|290557562|gb|EFD91086.1| conserved hypothetical protein [Listeria monocytogenes FSL
J2-071]
Length = 220
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 1 MIKELG-LSMFIMTTISGCGLASREKKKVFLHKSNDTD--IVNKRFGSSLDKAEDEFQMQ 57
M K + + M + ++GC + K ++ + ++ G DE + +
Sbjct: 1 MKKIIFTVVMSLALVLTGCADVTNTVKVDKKGEATISFDIAISSVAGIFASSYSDEVESK 60
Query: 58 LQDTGIVVSRIGDMIT-CYIPVHVSFVSEVFLEKK 91
L++ G V + + + + ++ ++ +
Sbjct: 61 LKEAGFTVDKKSNTSYHIEKKLDKNETTKSDMKPE 95
>gi|256823540|ref|YP_003147503.1| FKBP-type peptidylprolyl isomerase [Kangiella koreensis DSM 16069]
gi|256797079|gb|ACV27735.1| peptidylprolyl isomerase FKBP-type [Kangiella koreensis DSM 16069]
Length = 328
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 28/96 (29%), Gaps = 10/96 (10%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK------RFGSSLDKAEDEFQ 55
+K+ L + + C ++ + + T+ + G + +
Sbjct: 18 MKKTTLVLAFSAALVACEQSNDVQSEKPEQTKQVTEFKGEYDKTAYAIGVNFSTQMGQNF 77
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
L++ G+ + D + F L +
Sbjct: 78 ESLKEYGVEI----DPQIVAEGIKDGFAGNAKLTDE 109
>gi|148266012|ref|YP_001232718.1| hypothetical protein Gura_4001 [Geobacter uraniireducens Rf4]
gi|146399512|gb|ABQ28145.1| hypothetical protein Gura_4001 [Geobacter uraniireducens Rf4]
Length = 110
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 1 MIKELG-LSMFIMTTISGCGLASREKKKVFLHKSNDTDIV 39
M+K+L L + ++GC A++ K + + V
Sbjct: 1 MLKKLVPLCLLACIALAGCSSANKITKDLLISSEPPGATV 40
>gi|315638115|ref|ZP_07893298.1| competence lipoprotein ComL [Campylobacter upsaliensis JV21]
gi|315481795|gb|EFU72416.1| competence lipoprotein ComL [Campylobacter upsaliensis JV21]
Length = 215
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 20/51 (39%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
M K L + I+T + C ++++ I+ L+KA+
Sbjct: 1 MKKNLLILSLIITFFTACSTKNKDELYNLSPSQWYAQIIKDLQDKDLEKAD 51
>gi|260551639|ref|ZP_05825713.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
gi|260405382|gb|EEW98876.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
Length = 213
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 33/128 (25%), Gaps = 12/128 (9%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF--------GSSLDKAED 52
M K L L + +SGC AS K + + K
Sbjct: 1 MKKYLTLFIIGSALLSGCSNASDNTKNSEVKTETPAPKALSAEDQKIINKHNEYVQKYSM 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP--MLQLIATILNKFPSTV 110
E + Q + D IT + ++ + + L L + P+
Sbjct: 61 EDKEVFQKHMREILPEVDKITDKRKRELLQMNIYMILNDYDKAHALND--KQLVEKPNDT 118
Query: 111 IAIQSHTD 118
+
Sbjct: 119 ARLTFRCQ 126
>gi|229188787|ref|ZP_04315822.1| hypothetical protein bcere0002_4790 [Bacillus cereus ATCC 10876]
gi|228594688|gb|EEK52472.1| hypothetical protein bcere0002_4790 [Bacillus cereus ATCC 10876]
Length = 173
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF 43
+K++G + + I+GC A + K ++ VN
Sbjct: 1 MKKIGTMLLLSFLITGCTQAQPDSKASKTEAVATSNQVNAPS 42
>gi|257791824|ref|YP_003182430.1| periplasmic binding protein [Eggerthella lenta DSM 2243]
gi|257475721|gb|ACV56041.1| periplasmic binding protein [Eggerthella lenta DSM 2243]
Length = 335
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/165 (8%), Positives = 39/165 (23%), Gaps = 13/165 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR--------FGSSLDKAEDEFQM 56
+ S+ ++GC A + ++ G+ + + +
Sbjct: 13 VAASLAATMMLAGCSAAQPNADADASAPQTEAPAASQAGAVTFTDDTGAEVTVDNPQRVV 72
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + + +S+ L+ + +Q + P+ I
Sbjct: 73 ACMGSFASIWELAGGTLVGASDDAFTLSDYDLKSE---NVQKVGDF--SNPNLESIIALE 127
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
D + + + + V FA
Sbjct: 128 PDFVIMTSGSGGRGGDSNQADLKAALAASNIPVACFQVTTFADYE 172
>gi|226314750|ref|YP_002774646.1| hypothetical protein BBR47_51650 [Brevibacillus brevis NBRC
100599]
gi|226097700|dbj|BAH46142.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 213
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 21/75 (28%), Gaps = 1/75 (1%)
Query: 1 MIKELGLSMFI-MTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M K + +++ + M +S C + K + + TD D +
Sbjct: 1 MKKLVSVALLLSMLAVSACSNKPADTKPAEQNAAQTTDAAKPTEAPKTDSTTPAATTSDK 60
Query: 60 DTGIVVSRIGDMITC 74
V I
Sbjct: 61 LEAKKVLNDKVEILI 75
>gi|206968203|ref|ZP_03229159.1| putative lipoprotein [Bacillus cereus AH1134]
gi|229177109|ref|ZP_04304498.1| hypothetical protein bcere0005_4850 [Bacillus cereus 172560W]
gi|206737123|gb|EDZ54270.1| putative lipoprotein [Bacillus cereus AH1134]
gi|228606290|gb|EEK63722.1| hypothetical protein bcere0005_4850 [Bacillus cereus 172560W]
Length = 173
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF 43
+K++G + + I+GC A + K ++ VN
Sbjct: 1 MKKIGTMLLLSFLITGCTQAQPDSKASKTEAVATSNQVNAPS 42
>gi|222056862|ref|YP_002539224.1| protein of unknown function DUF748 [Geobacter sp. FRC-32]
gi|221566151|gb|ACM22123.1| protein of unknown function DUF748 [Geobacter sp. FRC-32]
Length = 992
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 14/54 (25%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLL 128
+ L L +A LN P+ IA+ D +
Sbjct: 802 DLSSVGFTPGSAELSPAEREKLLKLAAALNDRPALKIAVTGFVDREHDDEGYRN 855
>gi|332826497|gb|EGJ99326.1| hypothetical protein HMPREF9455_00359 [Dysgonomonas gadei ATCC
BAA-286]
Length = 619
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 40/127 (31%), Gaps = 25/127 (19%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNK---FPSTVIAIQSHTDSIGTLKNNLLISQ 131
+ + L + L+ L + + I + D +GT N +S+
Sbjct: 494 SLLSVYFDFDKSVLLPSAIQELK---MWLAETDLHNIESLIIDGYADEMGTEDYNYDLSR 550
Query: 132 ERADVIKSYLIQRGVSSNRFISVRGFAY-----KYPI-----DTNDTKVGR-------QN 174
RA+V+ + + R V G P+ + N +
Sbjct: 551 RRAEVVAQ-WLSQQGIKARA-RVTGKGKIFVNSDSPLEVPFYNDNRNTSIWNHKIWMNRK 608
Query: 175 NQRIEIQ 181
+R++I+
Sbjct: 609 ARRVDIK 615
>gi|329894097|ref|ZP_08270082.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [gamma
proteobacterium IMCC3088]
gi|328923269|gb|EGG30589.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [gamma
proteobacterium IMCC3088]
Length = 228
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 28/96 (29%), Gaps = 1/96 (1%)
Query: 2 IKELGLSMFIMTTISGC-GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K L S+ T++GC + + D + ++
Sbjct: 1 MKALIASLLATLTLAGCISDTGINPTESSASIAKPQTSEAVNVILETDLGDMILRVDTDK 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
I + +I + +F L+ + P L
Sbjct: 61 APITSAYFLRIIDNGLYNGATFYRSASLDGEAGPQL 96
>gi|317489824|ref|ZP_07948321.1| periplasmic binding protein [Eggerthella sp. 1_3_56FAA]
gi|316911073|gb|EFV32685.1| periplasmic binding protein [Eggerthella sp. 1_3_56FAA]
Length = 335
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/165 (8%), Positives = 39/165 (23%), Gaps = 13/165 (7%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKR--------FGSSLDKAEDEFQM 56
+ S+ ++GC A + ++ G+ + + +
Sbjct: 13 VAASLAATMMLAGCSAAQPNADADASAPQTEAPAASQAGAVTFTDDTGAEVTVDNPQRVV 72
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ + + +S+ L+ + +Q + P+ I
Sbjct: 73 ACMGSFASIWELAGGTLVGASDDAFTLSDYDLKSE---NVQKVGDF--SNPNLESIIALE 127
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
D + + + + V FA
Sbjct: 128 PDFVIMTSGSGGRGGDSNQADLKAALAASNIPVACFQVTTFADYE 172
>gi|306820654|ref|ZP_07454282.1| ABC superfamily ATP binding cassette transporter, binding protein
[Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304551264|gb|EFM39227.1| ABC superfamily ATP binding cassette transporter, binding protein
[Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 289
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/40 (17%), Positives = 16/40 (40%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN 40
+ K L L++ + ++ CG S + + + N
Sbjct: 5 IKKILTLALSSILLLTACGSTSNTQSENKDNTQNSNKTAT 44
>gi|262190209|ref|ZP_06048485.1| hypothetical protein VIH_000580 [Vibrio cholerae CT 5369-93]
gi|262033906|gb|EEY52370.1| hypothetical protein VIH_000580 [Vibrio cholerae CT 5369-93]
Length = 174
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/95 (11%), Positives = 27/95 (28%), Gaps = 5/95 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L++ I+GC ++ + K + F+++
Sbjct: 1 MKKIVLAIASSLAIAGCASNDIGDAVNNGVNGAINGVLGSVGAGDVVKNDKSFKVER--- 57
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
V G +++ K L
Sbjct: 58 --EVMSTGSAKKMSRDYGTITITKTEKNPKSKTEL 90
>gi|213965161|ref|ZP_03393359.1| phosphatase [Corynebacterium amycolatum SK46]
gi|213952275|gb|EEB63659.1| phosphatase [Corynebacterium amycolatum SK46]
Length = 725
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 49/190 (25%), Gaps = 19/190 (10%)
Query: 6 GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE-DEFQMQLQDTGIV 64
L++ ++ C S + G S + D + +D ++
Sbjct: 70 ALAVGGGAVLAACSSDGSGSAAGGSDASGTAAAGDGSKGESPEGMRFDAVKPNTEDAVVI 129
Query: 65 VSRIGDMITCYIPVHV------SFVSEVFLEKKFLP--MLQLIATILNKFPSTVIAIQSH 116
+ + + E + A ++ T++ + SH
Sbjct: 130 PDGYEQNVLIRWGDPIHEGGPEFDFDKQTPENQKKQFGFNNDFAGLIKAEDGTLLYVCSH 189
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
+ + ++ + + + + PI ++ N+
Sbjct: 190 EYTTEPMMFRAYKKEDATKEQVDIGLAAHGQTILAVEEDDKGFLKPILSDK------RNR 243
Query: 177 RI----EIQI 182
RI E +
Sbjct: 244 RITGFTEFTV 253
>gi|213023658|ref|ZP_03338105.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 67
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 17/51 (33%), Gaps = 9/51 (17%)
Query: 141 LIQRGVSSNRFISVRGFAYKYPIDTNDTK---------VGRQNNQRIEIQI 182
+ + IS RG P+ N ++R+EI++
Sbjct: 5 YLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV 55
>gi|251794244|ref|YP_003008975.1| periplasmic binding protein [Paenibacillus sp. JDR-2]
gi|247541870|gb|ACS98888.1| periplasmic binding protein [Paenibacillus sp. JDR-2]
Length = 318
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/116 (12%), Positives = 33/116 (28%), Gaps = 17/116 (14%)
Query: 1 MIKE-----LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M+++ + L M ++ +S CG + + S + ++ D
Sbjct: 1 MMRKKKSTIMLLLMALVIVLSACGQNNNKTSGNNGAASPAAEQSGGSGAAATDAV----- 55
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
++ I V+ + V K L +A L +
Sbjct: 56 PKIASLSIHVTNDLLALDITAAGSVMGG-------KAKDFLSHVADRLKNTEKLGV 104
>gi|253573922|ref|ZP_04851264.1| extracellular solute-binding protein, family 1 [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251846399|gb|EES74405.1| extracellular solute-binding protein, family 1 [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 363
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 6/46 (13%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS 46
M+K L + + I+ CG + + ++ + +
Sbjct: 4 MMKALAMVVLSCLVITACGS--NNSGNAGGNSAASSENQGSQVKNE 47
>gi|225023855|ref|ZP_03713047.1| hypothetical protein EIKCOROL_00721 [Eikenella corrodens ATCC
23834]
gi|224943329|gb|EEG24538.1| hypothetical protein EIKCOROL_00721 [Eikenella corrodens ATCC
23834]
Length = 269
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 34/115 (29%), Gaps = 17/115 (14%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L + +S C S + + S+DK E +++
Sbjct: 1 MKKILLVTGLAVMLSACSSTST---------TAVSQDAQITQDWSVDKLYAEAHDEMESR 51
Query: 62 GIV-----VSRIGDMITCYIPVHVSFVSEVFL--EKKFLP-MLQLIATILNKFPS 108
+ S + ++ + + P L + L +P+
Sbjct: 52 NYSRSVRLYEILRARFPNTRQAVQSRLDTAYVYYKDEQQPQALAHVEQFLKLYPN 106
>gi|161950161|ref|YP_402007.2| hypothetical protein SDY_0299 [Shigella dysenteriae Sd197]
gi|309787025|ref|ZP_07681637.1| uncharacterized lipofamily protein [Shigella dysenteriae 1617]
gi|308924603|gb|EFP70098.1| uncharacterized lipofamily protein [Shigella dysenteriae 1617]
Length = 192
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 1 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRNDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQIVTLTASRDLRF 78
>gi|57242172|ref|ZP_00370112.1| competence lipoprotein (comL) [Campylobacter upsaliensis RM3195]
gi|57017364|gb|EAL54145.1| competence lipoprotein (comL) [Campylobacter upsaliensis RM3195]
Length = 215
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 21/51 (41%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
M K L + I+T + C ++++ T I+ L+KA+
Sbjct: 1 MKKNLLILSLIITFFTACSTKNKDELYNLSSSQWYTQIIKDLQDKDLEKAD 51
>gi|324324167|gb|ADY19427.1| ABC transporter, substrate-binding protein, putative [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 270
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Query: 2 IKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K++ LS+ + +S C S ++ K K + +K ++
Sbjct: 1 MKKVLLSIVSGAVLLLSACSGNSDKEVKALDEKKITVGVTGGPHEQIFEKVKEVAAKDGL 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ I V + V+ +
Sbjct: 61 EIDIKVFNDYVAPNVSLDEKSLDVNSYQTKS 91
>gi|320529699|ref|ZP_08030778.1| lipoprotein, YaeC family [Selenomonas artemidis F0399]
gi|320138060|gb|EFW29963.1| lipoprotein, YaeC family [Selenomonas artemidis F0399]
Length = 268
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/113 (9%), Positives = 36/113 (31%), Gaps = 12/113 (10%)
Query: 2 IKELGLSMFIMTTIS--GCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L + + ++ GCG K + K + + + + + +L+
Sbjct: 1 MKKLLTLVLAIAALAMVGCGGTDNNAKSEKVVKVGASPVPHAEIL-------EAIKPELE 53
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
G+ + + ++ ++ F + + + P +
Sbjct: 54 KDGVKLEIVEFNDYVQPN---LATNDKEIDANFFQHEPYLKNFMQEHPEVKLV 103
>gi|226951457|ref|ZP_03821921.1| lipoprotein [Acinetobacter sp. ATCC 27244]
gi|294650980|ref|ZP_06728320.1| lipoprotein [Acinetobacter haemolyticus ATCC 19194]
gi|226837750|gb|EEH70133.1| lipoprotein [Acinetobacter sp. ATCC 27244]
gi|292823081|gb|EFF81944.1| lipoprotein [Acinetobacter haemolyticus ATCC 19194]
Length = 155
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 4/44 (9%), Positives = 12/44 (27%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG 44
M K + + C K + + + ++ +
Sbjct: 1 MKKSIIALSLASVFLVACSKNDNTKNEEQMPTTAASEAIAADNA 44
>gi|225386728|ref|ZP_03756492.1| hypothetical protein CLOSTASPAR_00476 [Clostridium asparagiforme
DSM 15981]
gi|225047170|gb|EEG57416.1| hypothetical protein CLOSTASPAR_00476 [Clostridium asparagiforme
DSM 15981]
Length = 472
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 22/170 (12%), Positives = 52/170 (30%), Gaps = 40/170 (23%)
Query: 2 IKELGL--SMF---IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+K++ L ++ MT ++GCG + E ++ + S ++
Sbjct: 29 MKKIWLWRALACAGAMTLLAGCGAKTGET-----PETAAQTQAGQTGQSEAGTTKEGGAG 83
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSH 116
+L ++++ + A + + P I
Sbjct: 84 ELTGKLVIMTNASGGTFEAMNEVF-------------------ARFMEENPGVEIE---- 120
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYK-YPIDT 165
S G L+ ++ A+ + G S NR ++ P++
Sbjct: 121 YSSQGKDYEQLMKAKMAANDLPDLFATHGWSVNR------YSEYLRPLND 164
>gi|239626274|ref|ZP_04669305.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47_FAA]
gi|239520504|gb|EEQ60370.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47FAA]
Length = 430
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
M K + L+ ++T ++GCG ++ + ++ ++ + + + D AE+
Sbjct: 1 MKKYLSILLAAAVVTGLAGCGGSNTGTTQAPATQATESKAPDAQADTQADDAEE 54
>gi|150002861|ref|YP_001297605.1| lipoprotein [Bacteroides vulgatus ATCC 8482]
gi|149931285|gb|ABR37983.1| lipoprotein [Bacteroides vulgatus ATCC 8482]
Length = 142
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 38/139 (27%), Gaps = 15/139 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + I+ C S+ +SLD +
Sbjct: 1 MMKKLFILACVCLLITSCNSNSKNTNDSATSTET---TDMHNAENSLD-----YDGTYTG 52
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
T G +T I +F L ++ + ++ + + T
Sbjct: 53 TFPAADCPGINMTLTIKKDKTF----ELISEY---IDRQDATFKEYGTYSVEGNIITLIN 105
Query: 121 GTLKNNLLISQERADVIKS 139
G K + + +
Sbjct: 106 GEDKQYYKVGENTLTALNQ 124
>gi|126435742|ref|YP_001071433.1| hypothetical protein Mjls_3163 [Mycobacterium sp. JLS]
gi|126235542|gb|ABN98942.1| protein of unknown function DUF1214 [Mycobacterium sp. JLS]
Length = 479
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDK 49
MI+ L +++ +T ++GC + + + S V+ ++ K
Sbjct: 1 MIRRL-IALVAVTALAGCAQSGQTDEPAPATSSAPPAAVSPEEARAIAK 48
>gi|12657479|emb|CAC27792.1| putative ABC-transporter [Paenibacillus durus]
Length = 374
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 16/60 (26%), Gaps = 2/60 (3%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K L L ++ CG + + + S + + +L
Sbjct: 1 MKKSVNLLLIFMFCLLLAACGNGNSPASEAANGGAASPAPAETGGQSEAQSSPEAANEKL 60
>gi|291515426|emb|CBK64636.1| Fibrobacter succinogenes major domain (Fib_succ_major) [Alistipes
shahii WAL 8301]
Length = 545
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 23/215 (10%), Positives = 45/215 (20%), Gaps = 44/215 (20%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+L + + GC S + ++
Sbjct: 1 MMKKLFVICSWALLLGGCKSESGASDPD---GDKPVPPPSAELLQKIEDLNAGLVSLKTL 57
Query: 61 TGIVVSRIGDMITCYIPVH-VSFVSEVFLE----KKFLPMLQLIA--------------- 100
G V + ++F + L IA
Sbjct: 58 AGAVSQSEVRSLAETEDGVRLTFCDGTEVTVACNAAAEAPLIGIAVDGDAYYWTLAAEKD 117
Query: 101 -TILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159
L + + +G A V + G
Sbjct: 118 IPWLKDAAGAKMPVSGPVPVVGRDDKGFWTVTTDAAVTPWQI--------------GDGS 163
Query: 160 KYPIDTNDTKV------GRQNNQRIEIQIFPRGNI 188
P++ + + N R+EI + G +
Sbjct: 164 GNPVEATGDEQVELFRSVKAGNGRVEIALTDGGTL 198
>gi|257469068|ref|ZP_05633162.1| dipeptide-binding protein [Fusobacterium ulcerans ATCC 49185]
gi|317063314|ref|ZP_07927799.1| dipeptide-binding protein [Fusobacterium ulcerans ATCC 49185]
gi|313688990|gb|EFS25825.1| dipeptide-binding protein [Fusobacterium ulcerans ATCC 49185]
Length = 505
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/135 (9%), Positives = 41/135 (30%), Gaps = 25/135 (18%)
Query: 2 IKELGLSMFIMTTISGCGL-------ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
+K++ +M + GC + KK+ L + +
Sbjct: 1 MKKVFFIFLVMLGLVGCSDKEEKTVGTEKTKKEQVLRVGLNGKPKGVDPHMYSEVIGGIM 60
Query: 55 QMQLQDTGIVVSRIGD---------------MITCYIPVHVSFVSEVFLEKKFLPMLQLI 99
Q+ ++ + + G+ + + V F + L+ ++ +
Sbjct: 61 SQQIFNSLVEIDENGNIIPELAESWEFKDPTTLVFNLQKGVKFHNGDELKAS--DVVFSV 118
Query: 100 ATILNKFPSTVIAIQ 114
+ P++++ +
Sbjct: 119 -NRMKNKPASMVMVD 132
>gi|224541409|ref|ZP_03681948.1| hypothetical protein CATMIT_00571 [Catenibacterium mitsuokai DSM
15897]
gi|224525655|gb|EEF94760.1| hypothetical protein CATMIT_00571 [Catenibacterium mitsuokai DSM
15897]
Length = 299
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 1 MIKELGLSMFIM-TTISGCGLASREKKKVFLHK 32
++K+ +++ +SGCG + +E F
Sbjct: 28 IMKKTLITLAAAALVLSGCGSSPKEDDNTFTVG 60
>gi|160939606|ref|ZP_02086954.1| hypothetical protein CLOBOL_04498 [Clostridium bolteae ATCC
BAA-613]
gi|158437397|gb|EDP15161.1| hypothetical protein CLOBOL_04498 [Clostridium bolteae ATCC
BAA-613]
Length = 481
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 43/155 (27%), Gaps = 12/155 (7%)
Query: 1 MIKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K L ++ ++ ++GCG + S S D Q
Sbjct: 1 MKKRLIGYAAALLAVSMLAGCGAPAAGTGTAADPGSQAGASQPGTSQSGTS-QADASQTG 59
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHT 117
T S + + + V+ L+ + N + I +++
Sbjct: 60 TSQTDASQSAGAEGASITFWHSMGGVNG--------EALEYLVNKFNSENTMGIQVEAQY 111
Query: 118 DSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152
N L S + ++ + + + I
Sbjct: 112 QGEYDDAINKLKSAQIGNMGADLVQIYDIGTRFMI 146
>gi|71906029|ref|YP_283616.1| hypothetical protein Daro_0387 [Dechloromonas aromatica RCB]
gi|71845650|gb|AAZ45146.1| conserved hypothetical protein [Dechloromonas aromatica RCB]
Length = 152
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 14/47 (29%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSL 47
M K++ I+GC E K+ + G +
Sbjct: 1 MFKKIASVAIFAAFITGCASVPMESKEASDQAKRFPAPSQGQAGLYI 47
>gi|58013361|gb|AAW63035.1| VcgE [Vibrio vulnificus]
Length = 164
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/51 (13%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLH--KSNDTDIVNKRFGSSLDK 49
M K++ ++ F+ + GC S++ + + + K
Sbjct: 1 MYKKIAIAAFVSVALMGCQTTSKQAQTGIESGYGEMANAALMSAVQTWSQK 51
>gi|304321652|ref|YP_003855295.1| Polysaccharide export protein [Parvularcula bermudensis HTCC2503]
gi|303300554|gb|ADM10153.1| Polysaccharide export protein [Parvularcula bermudensis HTCC2503]
Length = 235
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 32/110 (29%), Gaps = 8/110 (7%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF-QMQLQDTGIVV 65
+ + + +S C S + + D + D+ E + + T + V
Sbjct: 36 MILGALFALSACAGTSPQPLGGTGTGAEDFAATPQYLIGPYDELEVFVWRAEELSTEVTV 95
Query: 66 SRIGDMITCYIPVHVSFVSE--VFLEKKFLPMLQLIATILNKFPSTVIAI 113
G I+ + + + L +L K P + +
Sbjct: 96 RPDG-RISTPLVSDMLAAGKTPSQLSDDIAKVLSKYV----KTPEVTVIV 140
>gi|126175073|ref|YP_001051222.1| lipoprotein [Shewanella baltica OS155]
gi|125998278|gb|ABN62353.1| lipoprotein [Shewanella baltica OS155]
Length = 149
Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKV----FLHKSNDTDIVNKRFGSSLD 48
M K L + + C A +E+ V ++ + V +SLD
Sbjct: 1 MKKSLCYIALLALFTTACSEAPKEETAVDTAQAQTEAAKSAPVGDTSQNSLD 52
>gi|322385853|ref|ZP_08059496.1| peptidyl-prolyl cis-trans isomerase [Streptococcus cristatus ATCC
51100]
gi|321270138|gb|EFX53055.1| peptidyl-prolyl cis-trans isomerase [Streptococcus cristatus ATCC
51100]
Length = 376
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 36/102 (35%), Gaps = 6/102 (5%)
Query: 1 MIKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIV-NKRFGSSLDKAEDEFQM 56
M K++ +++F + ++ C +++K V + T + ++ + QM
Sbjct: 19 MKKKILTGAVTLFSVVALAACSQTAKDKDIVTMKGETITVSEFYDQVKNNGSSQQVLLQM 78
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
++ + + G +T + F +L
Sbjct: 79 AIKQ--VFEEKYGKKVTDKEVEEAFEKMKSAYGSAFQNVLAQ 118
>gi|270340124|ref|ZP_06007126.2| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332471|gb|EFA43257.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 226
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/150 (10%), Positives = 50/150 (33%), Gaps = 8/150 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K++ + + ++G + + + K+ + D + E +
Sbjct: 6 VMKKIIVLLLACLPLAGMA-----QNTWEIPQEEAQQSQLKQKKAVFDTKKKENAKYMVG 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
V + + + V ++ + +K ++ I N+FP + IA+ + ++
Sbjct: 61 A---VPEVDGKVVFTLDKAVPGMTAADIYQKVYGVISAITKEDNQFPQSKIAVVNKSEHT 117
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNR 150
+ + + + + R
Sbjct: 118 IAARMKEWLVFRNSFLSLDRTVFNYTLIAR 147
>gi|227874801|ref|ZP_03992954.1| peptide ABC superfamily ATP binding cassette transporter
peptide-binding protein [Mobiluncus mulieris ATCC 35243]
gi|269976780|ref|ZP_06183755.1| ABC-type transporter, periplasmic component [Mobiluncus mulieris
28-1]
gi|306818093|ref|ZP_07451824.1| dipeptide ABC superfamily ATP binding cassette transporter
peptide-binding protein [Mobiluncus mulieris ATCC 35239]
gi|227844576|gb|EEJ54732.1| peptide ABC superfamily ATP binding cassette transporter
peptide-binding protein [Mobiluncus mulieris ATCC 35243]
gi|269934977|gb|EEZ91536.1| ABC-type transporter, periplasmic component [Mobiluncus mulieris
28-1]
gi|304649057|gb|EFM46351.1| dipeptide ABC superfamily ATP binding cassette transporter
peptide-binding protein [Mobiluncus mulieris ATCC 35239]
Length = 552
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 21/162 (12%)
Query: 1 MIKELG----LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDEFQ 55
M K+L L+ + T+S CG AS + K K TD V +
Sbjct: 1 MKKKLLSTMALTAAMALTLSACGGASADTDKKADDKPVKTDAVITVNNTEPQHPLIPGNT 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
++ ++ D I + + ++K L +A + + I+
Sbjct: 61 NEVAGGLVI-----DHIYAGLQSY---------DEKGETQL-EMAESIKSDDNQTWTIKI 105
Query: 116 HTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
D + + + + Q VS++ F SV G+
Sbjct: 106 KPDQKFSDGSAVNAKSFVDAW-NQTVKQNMVSASFFESVEGY 146
>gi|253701957|ref|YP_003023146.1| hypothetical protein GM21_3363 [Geobacter sp. M21]
gi|251776807|gb|ACT19388.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 135
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 31/126 (24%), Gaps = 15/126 (11%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG----SSLDKAE----- 51
M K L L + GC + + + G + L E
Sbjct: 1 MKKTLVLLAIVAVAAVGCKKKEEAPQTTAPEAAPAGQMPAAAPGGDPHAGLKPQEVKPGA 60
Query: 52 ---DEFQMQLQDTG---IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
+ + G + + G + V + PM+ + L +
Sbjct: 61 GHKGKVLETMDSGGYTYVQIEENGQKLWVAAMQTPVKVGDTVEFPDSPPMVNFQSKTLKR 120
Query: 106 FPSTVI 111
+I
Sbjct: 121 TFDKII 126
>gi|153806043|ref|ZP_01958711.1| hypothetical protein BACCAC_00294 [Bacteroides caccae ATCC 43185]
gi|149130720|gb|EDM21926.1| hypothetical protein BACCAC_00294 [Bacteroides caccae ATCC 43185]
Length = 383
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 4/32 (12%), Positives = 12/32 (37%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKS 33
+K++ TI+ C + + + +
Sbjct: 1 MKKITFVALAALTITACSSGPKFQVNGDISGA 32
>gi|70725180|ref|YP_252094.1| ribose ABC transporter ribose-binding protein [Staphylococcus
haemolyticus JCSC1435]
gi|68445904|dbj|BAE03488.1| ribose ABC transporter (ribose-binding protein) [Staphylococcus
haemolyticus JCSC1435]
Length = 305
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 5/119 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L +++ ++ ++ C L S K + + G S+ + F +++++
Sbjct: 1 MKKLLAITLALVLFLAACSLES--PLKNDKNGKTNKKKSEITIGVSISTLNNPFFVKIKN 58
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ + + V + ++Q L P+ AI S +S
Sbjct: 59 G---IEKDAKAQGMKVKVVDARDDSAKQTNDIEDLIQQQVDYLIVNPTDSSAISSAVES 114
>gi|307132048|ref|YP_003884064.1| hypothetical protein Dda3937_04377 [Dickeya dadantii 3937]
gi|306529577|gb|ADM99507.1| hypothetical protein Dda3937_04377 [Dickeya dadantii 3937]
Length = 114
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 31/102 (30%), Gaps = 9/102 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K+L +++ I +++GC + + +K F + E +Q+
Sbjct: 9 LMKKLFITVMISLSLAGCATKQYAQAPSVTPEE------SKEFDCKVINQEIAKTRSIQN 62
Query: 61 TGIVVSRIGDMITCYIPVHVSFVS---EVFLEKKFLPMLQLI 99
+ + + KK L +
Sbjct: 63 EIESTGQFDGRTVLGFMGDFGIGNGMAKSEARKKAQARLSQL 104
>gi|299144938|ref|ZP_07038006.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
gi|298515429|gb|EFI39310.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
Length = 321
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 18/50 (36%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
+K++ L++ I+GC + + N V + D +
Sbjct: 1 MKKILLAVTAALAITGCSQNEEFEAPSQKAEINFNTAVTRATELDTDGLK 50
>gi|294650460|ref|ZP_06727819.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292823603|gb|EFF82447.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 158
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 4/28 (14%), Positives = 13/28 (46%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVF 29
+K+L ++ ++ GC ++ +
Sbjct: 1 MKKLLIAGLFTFSLVGCASTPQQPQTTA 28
>gi|295401112|ref|ZP_06811086.1| protein of unknown function DUF534 [Geobacillus thermoglucosidasius
C56-YS93]
gi|312112112|ref|YP_003990428.1| hypothetical protein GY4MC1_3140 [Geobacillus sp. Y4.1MC1]
gi|294976905|gb|EFG52509.1| protein of unknown function DUF534 [Geobacillus thermoglucosidasius
C56-YS93]
gi|311217213|gb|ADP75817.1| protein of unknown function DUF534 [Geobacillus sp. Y4.1MC1]
Length = 330
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 34/113 (30%), Gaps = 15/113 (13%)
Query: 1 MIKE-----LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M+K+ L +SGCG K K+ + SLD A + F+
Sbjct: 1 MMKKRIQQIAMLCSASFLLLSGCGAKETSKSDGNKEKTYQIGVTQFVEHPSLDAALEGFK 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHV-----SFVSEVFL-----EKKFLPMLQL 98
L+D G+ VS + + +V L L
Sbjct: 61 QALKDKGLSVSYDVQNAQGDMNNNQTIANNFASDQVDLIFANSTPSAQAALNA 113
>gi|226954256|ref|ZP_03824720.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|226834984|gb|EEH67367.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
Length = 158
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 4/28 (14%), Positives = 13/28 (46%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVF 29
+K+L ++ ++ GC ++ +
Sbjct: 1 MKKLLIAGLFTFSLVGCASTPQQPQTTA 28
>gi|254506681|ref|ZP_05118821.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
gi|219550262|gb|EED27247.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
Length = 395
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 31/97 (31%), Gaps = 8/97 (8%)
Query: 1 MIKELGLSMFIMTTISGCGL-----ASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
M K + LS ++GC + ++ + + +D E +
Sbjct: 1 MKKTIILSALSTLALAGCQSDEAKVTDTSNARANDITQTKRELALQLSKNYVD-IESTLR 59
Query: 56 MQL--QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
++ QDT I VS + +++ +
Sbjct: 60 KEITAQDTSIAVSEFVEQQPLSKFSQRLEIADEQIRS 96
>gi|196042487|ref|ZP_03109728.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196026644|gb|EDX65310.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
Length = 213
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 31/100 (31%), Gaps = 3/100 (3%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K+ + L+ + +++ CG + V + K+ S K E +
Sbjct: 1 MYKKMGTIALAGALAFSLAACGSNEKTSNGVETKEKEQPKQETKKDNSKEGKTESTKGNR 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ D + + +E L +++
Sbjct: 61 SNPIAFNETASIDDVILNTDGGEFKKFKAKVEVSVLEVIR 100
>gi|254303422|ref|ZP_04970780.1| hypothetical protein FNP_1073 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323614|gb|EDK88864.1| hypothetical protein FNP_1073 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 148
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 10/81 (12%), Positives = 27/81 (33%), Gaps = 6/81 (7%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ LS+ ++ C + K T + + E + + L++
Sbjct: 1 MKKIFLSILMLFAFVACSSTQFVHDAKPITKEEKTVL----IQYFPSEFEIDLEKALENN 56
Query: 62 --GIVVSRIGDMITCYIPVHV 80
+ V D + + +
Sbjct: 57 FWKVSVVSNKDTSSPSLKSNF 77
>gi|90411743|ref|ZP_01219752.1| putative heat shock protein HslJ [Photobacterium profundum 3TCK]
gi|90327305|gb|EAS43669.1| putative heat shock protein HslJ [Photobacterium profundum 3TCK]
Length = 145
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/114 (9%), Positives = 32/114 (28%), Gaps = 6/114 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + + ++ C E KV + + +D + +
Sbjct: 1 MKKRLLAVLALPIILAACASNDSEATKVASEGDLVNNNW---VLTQVDSKALDLPEPFKA 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ ++ + L+ ++ + + P +A++
Sbjct: 58 PNLELTDGLGANGHSGCNRYF--GQAELK-DGKLRIEKMGMTMMACPEPAMAME 108
>gi|81427805|ref|YP_394804.1| lipoprotein precursor [Lactobacillus sakei subsp. sakei 23K]
gi|78609446|emb|CAI54492.1| Hypothetical lipoprotein precursor [Lactobacillus sakei subsp.
sakei 23K]
Length = 330
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/109 (11%), Positives = 26/109 (23%), Gaps = 8/109 (7%)
Query: 2 IKEL-----GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
+K+L L ++GC + + V K D +
Sbjct: 1 MKKLTHVLLMLMASCFVILAGCQNKTTVPAAATKTEDQIEQYVQKVNQLYADADHKKPAK 60
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK 105
+ + + I ++ L K + L +
Sbjct: 61 LTANKKNEIIESAQKLDHKISDNLYM---SALSSKSKTAFKAAQKDLKR 106
>gi|330447604|ref|ZP_08311252.1| putative uncharacterized protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491795|dbj|GAA05749.1| putative uncharacterized protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 132
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/128 (10%), Positives = 30/128 (23%), Gaps = 13/128 (10%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L L+ I GC + + + D + Q
Sbjct: 1 MKKLFLTTLASLLIVGCTSKPVMNLNNVYVPTAVSGQQHTAE----DVQKAILTAAEQRG 56
Query: 62 GIVVSRIGDMITCYIP--------VHVSFVSEVFLEKKFLPMLQLIATIL-NKFPSTVIA 112
+I I + ++ K L T + + + V+
Sbjct: 57 WSARVIKPGLILANISVRTHSATIEIPYSSTSYSIDYKDSQNLDYDGTDIHRNYNNWVVR 116
Query: 113 IQSHTDSI 120
+
Sbjct: 117 LSRSIQQQ 124
>gi|313205213|ref|YP_004043870.1| peptidyL-dipeptidase dcp [Paludibacter propionicigenes WB4]
gi|312444529|gb|ADQ80885.1| peptidyl-dipeptidase Dcp [Paludibacter propionicigenes WB4]
Length = 697
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/121 (10%), Positives = 35/121 (28%), Gaps = 14/121 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVN--------------KRFGSSL 47
+K++ L++ + + GC + + +K K+ + +
Sbjct: 1 MKKILLTLTMGILLMGCAKNDNPFFETYKNKYGAPPFDKIKNEHYMPAFKEGIKKHQAEI 60
Query: 48 DKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFP 107
D + D I + + + K+ + I+ IL++
Sbjct: 61 DSIAESKDAPTFDNTIAAMDFSGELLKKVSSVFFNLYSSNTNKEMDKIANEISPILSEHN 120
Query: 108 S 108
Sbjct: 121 D 121
>gi|299143738|ref|ZP_07036818.1| 15 kDa lipoprotein [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518223|gb|EFI41962.1| 15 kDa lipoprotein [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 143
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 8/130 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREK------KKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ 55
+K+L L M ++ ++GCG ++ K +D D + L + + +
Sbjct: 1 MKKLALLMILIFVLAGCGNNKEQEESTISYKDGEYTAQSDPDDWGGKIVLRLTVKDGKIE 60
Query: 56 MQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATIL--NKFPSTVIAI 113
QD + + I +S + + + + +L + + V I
Sbjct: 61 TCEQDNLDSSGQEKNEEYGKIDGKISNPGLYKIAQGAVEATKEYPNMLIDKQDINKVEVI 120
Query: 114 QSHTDSIGTL 123
T S
Sbjct: 121 SGATVSHKCF 130
>gi|298384387|ref|ZP_06993947.1| glucuronyl hydrolase [Bacteroides sp. 1_1_14]
gi|298262666|gb|EFI05530.1| glucuronyl hydrolase [Bacteroides sp. 1_1_14]
Length = 434
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 15/48 (31%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD 48
M K+L L + ++ C +E + + +D
Sbjct: 4 MKKKLVLFASVAIALASCQTTPKEDYSWIKKGLDVASAQLQLTAEEID 51
>gi|269795361|ref|YP_003314816.1| amino acid-binding protein [Sanguibacter keddieii DSM 10542]
gi|269097546|gb|ACZ21982.1| amino acid-binding protein [Sanguibacter keddieii DSM 10542]
Length = 413
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/138 (9%), Positives = 35/138 (25%), Gaps = 3/138 (2%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L + + ++ CG S + + ++ + + + +++
Sbjct: 12 LAIVLATTLVLTACGQKSTDDETGSSPGASASATGGLSIVPLVQIDPEGVEVEASTGDTA 71
Query: 65 VSRIGDMITCYIPVHVSFVSEVFLEKKF---LPMLQLIATILNKFPSTVIAIQSHTDSIG 121
V GD ++ +L L+K Q
Sbjct: 72 VDPAGDGTATCAEGTTIAMAGALTGPNAALGQNILNGAQLALDKHNEANADCQVALKQFD 131
Query: 122 TLKNNLLISQERADVIKS 139
T + +Q ++
Sbjct: 132 TEGDPQKATQVAPQIVGD 149
>gi|226223142|ref|YP_002757249.1| phosphoglycerate mutase [Listeria monocytogenes Clip81459]
gi|225875604|emb|CAS04307.1| Putative phosphoglycerate mutase [Listeria monocytogenes serotype
4b str. CLIP 80459]
Length = 271
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 9/95 (9%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV------NKRFGSSLDKAE 51
M K +L +++ + I+GCG ++ KK D + K ++ D+ +
Sbjct: 1 MKKNIFKLMMALCAVLLIAGCGNSTTADKKETKETKEDGTVTFYVVRHGKTMLNTTDRVQ 60
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
L G V + + ++ S+
Sbjct: 61 GWSDAVLTPAGEEVVKSAGKGLKDVDFSAAYSSDS 95
>gi|29350066|ref|NP_813569.1| glucuronyl hydrolase [Bacteroides thetaiotaomicron VPI-5482]
gi|253571529|ref|ZP_04848935.1| glucuronyl hydrolase [Bacteroides sp. 1_1_6]
gi|29341978|gb|AAO79763.1| glucuronyl hydrolase [Bacteroides thetaiotaomicron VPI-5482]
gi|251838737|gb|EES66822.1| glucuronyl hydrolase [Bacteroides sp. 1_1_6]
Length = 434
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 15/48 (31%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD 48
M K+L L + ++ C +E + + +D
Sbjct: 4 MKKKLVLFASVAIALASCQTTPKEDYSWIKKGLDVASAQLQLTAEEID 51
>gi|302866126|ref|YP_003834763.1| hypothetical protein Micau_1632 [Micromonospora aurantiaca ATCC
27029]
gi|302568985|gb|ADL45187.1| hypothetical protein Micau_1632 [Micromonospora aurantiaca ATCC
27029]
Length = 225
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKS--NDTDIVNKRFGSSLDKAED 52
M + L ++ ++T ++GC A+ + + + D+
Sbjct: 1 MTRRLIIAAALVTVLAGCSPATEPGAATAPDPALVAPSPTDGGAAAALRDRYAA 54
>gi|257057761|ref|YP_003135593.1| hypothetical protein Svir_38220 [Saccharomonospora viridis DSM
43017]
gi|256587633|gb|ACU98766.1| protein of unknown function (DUF1994) [Saccharomonospora viridis
DSM 43017]
Length = 228
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
+G+ ++GC A ++ + + + + E+ + QL D +
Sbjct: 8 RIGIITASFALLAGCA-AQKDAEAGSPTSNAGGSTAPAGSSAPDNADEEAARKQLADLTV 66
Query: 64 VVSRIGDM 71
D
Sbjct: 67 APEGSLDG 74
>gi|228908639|ref|ZP_04072476.1| hypothetical protein bthur0013_27970 [Bacillus thuringiensis IBL
200]
gi|228850980|gb|EEM95797.1| hypothetical protein bthur0013_27970 [Bacillus thuringiensis IBL
200]
Length = 223
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 24/65 (36%), Gaps = 6/65 (9%)
Query: 1 MIKE------LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
M+K L L++ M ++ C +K+ ++N + N +A+
Sbjct: 1 MMKGYLKIVMLFLALACMFALTACKGTDEKKETNPTSENNKNEQSNSSEEQKNPEAKPSN 60
Query: 55 QMQLQ 59
+ +
Sbjct: 61 EKTTK 65
>gi|317505064|ref|ZP_07963011.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315663842|gb|EFV03562.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length = 182
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 30/106 (28%), Gaps = 7/106 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKS--NDTDIVNKRFGSSLDKAEDE-FQMQL 58
+K+ F++ +S C E + K + +D
Sbjct: 1 MKKYYFIFFLIMALSSCQKTKNETANNLVEKGFKAMQKAGEEVEIIKMDSLTPASLTFDE 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSF----VSEVFLEKKFLPMLQLIA 100
G+ + R D + + + F ++ + + IA
Sbjct: 61 TSKGVNMRRSIDHLKGEVSEKLQFLKPWAGVTNIKPELQEVNDKIA 106
>gi|253576262|ref|ZP_04853593.1| transcriptional regulator [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251844389|gb|EES72406.1| transcriptional regulator [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 456
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 34/105 (32%), Gaps = 12/105 (11%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K+ L + + +S CG + + + N G++ + E + +
Sbjct: 19 MKKKWMSLLAVVMLTGLLSACGSSGGNSSN-----EANGNQTNLNNGNTGTQTEQPAEPE 73
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSF----VSEVFLEKKFLPMLQL 98
+ T ++ DMI + ++ + + L
Sbjct: 74 ISGTVTFLTNRTDMIGKEYDDYAKRFKEKYPNAEIKFEAVTDLDK 118
>gi|284030630|ref|YP_003380561.1| extracellular solute-binding protein family 5 protein [Kribbella
flavida DSM 17836]
gi|283809923|gb|ADB31762.1| extracellular solute-binding protein family 5 [Kribbella flavida
DSM 17836]
Length = 586
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 22/84 (26%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+ ++ +M T++ CG S + + K S+ E + +
Sbjct: 4 KRITAVAATVMLTVAACGSPSSNNNTGGSNTGDAGTAQEKATDPSVKGPAPEIEGAKKGG 63
Query: 62 GIVVSRIGDMITCYIPVHVSFVSE 85
I V T
Sbjct: 64 TITVLSDVTPDTFDPTNIYYTDGN 87
>gi|225376852|ref|ZP_03754073.1| hypothetical protein ROSEINA2194_02494 [Roseburia inulinivorans
DSM 16841]
gi|225211348|gb|EEG93702.1| hypothetical protein ROSEINA2194_02494 [Roseburia inulinivorans
DSM 16841]
Length = 468
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Query: 1 MIKELGLSMF----IMTTISGC-GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
M K++ ++ + T ++GC G + + + + D DE
Sbjct: 1 MKKKIISALLCASMVATMVAGCGGSSDTTSTDNSNSGAAAPATESGFDAAETDTTGDE 58
>gi|187732550|ref|YP_001879144.1| hypothetical protein SbBS512_E0356 [Shigella boydii CDC 3083-94]
gi|187429542|gb|ACD08816.1| putative lipoprotein [Shigella boydii CDC 3083-94]
Length = 192
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 1 MFKKILFPLVALFMLAGCAKPPTTIEISPTITLPQQDPSLMGVTVSINGADQRTDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQIVTLTASRDLRF 78
>gi|329726441|gb|EGG62904.1| ABC transporter, substrate-binding protein, family 5
[Staphylococcus epidermidis VCU144]
Length = 491
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/109 (10%), Positives = 31/109 (28%), Gaps = 11/109 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL-- 58
M K + L + I ++ CG S K + + + + +
Sbjct: 1 MKKLITLIVMISFVLASCGGTSSTDKDTLNVEIPLKTKSIAPYETDIPVKTGALESLFKM 60
Query: 59 -QDTGIVV-------SRIGDMITCYIPVHVSFVSEVFLEKKF-LPMLQL 98
++ + + + + ++ F + L + L+
Sbjct: 61 SKNGKVKPLLVKNYHQVSDNQLELTLKDNIKFQNGHHLTGEAVKRSLEE 109
>gi|300790891|ref|YP_003771182.1| hypothetical protein AMED_9091 [Amycolatopsis mediterranei U32]
gi|299800405|gb|ADJ50780.1| hypothetical protein AMED_9091 [Amycolatopsis mediterranei U32]
Length = 377
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 34/118 (28%), Gaps = 12/118 (10%)
Query: 73 TCYIPVHVSFVSEVFLEKKFLPMLQLIA----TILNKFPSTVIAIQSHTDS-IGTLKNNL 127
T L L +L+ +A L P V+ ++ + G+
Sbjct: 260 TVSDSALGFTGDSAVLSPGALDLLRTLAGSITAALAGRPGAVVTVRGYAADPPGSTAAGR 319
Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYP----IDTND-TKVGRQNNQRIEI 180
+ + S +++ R + G P + + +R+EI
Sbjct: 320 QALADLRAQVVSDALRQAGVRQR-VDAAGVG-TQPDRTAMAGGRFDEAAAAAMRRVEI 375
>gi|296535657|ref|ZP_06897833.1| OmpA family domain protein [Roseomonas cervicalis ATCC 49957]
gi|296264008|gb|EFH10457.1| OmpA family domain protein [Roseomonas cervicalis ATCC 49957]
Length = 137
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 15/111 (13%)
Query: 76 IPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERAD 135
+ V L++ ++ +A P + + D G N +S RA+
Sbjct: 31 VQVVFFTEDSAALDEAAQGVVAQVARAAQAQPGAPVQVLGFADPDGGRAYNQALSAARAE 90
Query: 136 VIKSYLIQRGVSSNRFISVRGFA----YKYPIDTNDTKVGRQNNQRIEIQI 182
+ + L + + I V P+++ +R+EI+I
Sbjct: 91 NVAAALRAQ-GIAPARIRVAPRGPVPFEMMPLES----------RRVEIRI 130
>gi|288554624|ref|YP_003426559.1| oligopeptide ABC transporter oligopeptide-binding protein [Bacillus
pseudofirmus OF4]
gi|288545784|gb|ADC49667.1| oligopeptide ABC transporter (oligopeptide-binding protein)
[Bacillus pseudofirmus OF4]
Length = 538
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/137 (8%), Positives = 29/137 (21%), Gaps = 38/137 (27%)
Query: 1 MIKE----LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFG------------ 44
M K L+M + ++ C + + +
Sbjct: 3 MSKNSLFAFLLAMVLAFVLAACASEPDSSGEPAGDADGEDTEAAEGAEGGNLVIATLSDA 62
Query: 45 ---------------------SSLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV 83
+L ++ +++ + I V+F
Sbjct: 63 VSLDPASSNDVPSSNVIANIFETLVYQNEDLELEPGLAEDWEMIDDNTWEFKIREGVTFH 122
Query: 84 SEVFLEKK-FLPMLQLI 99
+ L + L I
Sbjct: 123 DDSELNAEVVKANLDRI 139
>gi|257081711|ref|ZP_05576072.1| oligopeptide ABC transporter [Enterococcus faecalis E1Sol]
gi|256989741|gb|EEU77043.1| oligopeptide ABC transporter [Enterococcus faecalis E1Sol]
Length = 542
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGD 70
+ G+
Sbjct: 66 GEGLFSFDEKGE 77
>gi|194334908|ref|YP_002016768.1| cytochrome c class I [Prosthecochloris aestuarii DSM 271]
gi|194312726|gb|ACF47121.1| cytochrome c class I [Prosthecochloris aestuarii DSM 271]
Length = 141
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 21/53 (39%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
M K + + F + GCG A + ++ + + +T + + AE
Sbjct: 1 MKKFIPAATFCALFVIGCGGADKPAEESAVDTATETIVEEAVVEETAPGAEAA 53
>gi|42779532|ref|NP_976779.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus ATCC 10987]
gi|42735448|gb|AAS39387.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus ATCC 10987]
Length = 305
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 39/117 (33%), Gaps = 5/117 (4%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L +S+ + +S C S +KK ++T G A + + L
Sbjct: 1 MKKLFISLTVLFVLVMSACSNGSTDKKNDAKGSKSETITYQSENGKVEVPANPKRVVVLS 60
Query: 60 DTGIVVSRIGDMIT-CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQ 114
V +G + + + L+ + + + P +I ++
Sbjct: 61 SFAGNVMSLGVNLVGVDSWSKQNPRFDSKLKDVA-EVSDENVEKIAELNPDLIIGLE 116
>gi|293370011|ref|ZP_06616578.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
gi|294646041|ref|ZP_06723706.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
gi|294810530|ref|ZP_06769183.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
gi|292634929|gb|EFF53451.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
gi|292638612|gb|EFF56965.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
gi|294442294|gb|EFG11108.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
Length = 251
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 23/153 (15%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + L++ + ++GC KV K +D DK + +
Sbjct: 46 MKTILLAVGTLCLMAGCSS------KVASSKGIVSDATMNTVTIVTDKNDTLSFSTIDAN 99
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
V + + + V + + +P A+ L ++P + I + D G
Sbjct: 100 KDEV----NGLLLNDTLEVFYTGKYTP---GMP-----ASKLVQYPQSPI-VGGDRDEHG 146
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+ + ++ I+ R SV
Sbjct: 147 C----IGSAGYVWCEVQKDCIRLFEKGIRTESV 175
>gi|255974871|ref|ZP_05425457.1| oligopeptide ABC transporter [Enterococcus faecalis T2]
gi|307278727|ref|ZP_07559794.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0860]
gi|255967743|gb|EET98365.1| oligopeptide ABC transporter [Enterococcus faecalis T2]
gi|306504588|gb|EFM73791.1| bacterial extracellular solute-binding protein, family 5
[Enterococcus faecalis TX0860]
Length = 542
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLH---KSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+ L L+ ++ +SGCG +E KK D+++ ++D + Q+
Sbjct: 6 KQRLSLAAIMVLLLSGCGSVGKETKKQEQQVLRVGIDSELSTADVSFAMDNTAADVMSQV 65
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSE-----VFLEKKFL 93
+ G+ V ++ + K
Sbjct: 66 GEGLFSFDEKGEAKPALATEKVQPSNDGLSYTFTIRKDAK 105
>gi|237713717|ref|ZP_04544198.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262409377|ref|ZP_06085920.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294644918|ref|ZP_06722654.1| efflux transporter, RND family, MFP subunit [Bacteroides ovatus
SD CC 2a]
gi|294808814|ref|ZP_06767544.1| efflux transporter, RND family, MFP subunit [Bacteroides
xylanisolvens SD CC 1b]
gi|229446164|gb|EEO51955.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262352829|gb|EEZ01926.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639731|gb|EFF58013.1| efflux transporter, RND family, MFP subunit [Bacteroides ovatus
SD CC 2a]
gi|294443986|gb|EFG12723.1| efflux transporter, RND family, MFP subunit [Bacteroides
xylanisolvens SD CC 1b]
Length = 351
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 6/31 (19%), Positives = 10/31 (32%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLH 31
M K+ G + ++GCG
Sbjct: 1 MKKKFGFVLAAAILLAGCGQKKETTTTTARP 31
>gi|297584179|ref|YP_003699959.1| peptidylprolyl isomerase [Bacillus selenitireducens MLS10]
gi|297142636|gb|ADH99393.1| Peptidylprolyl isomerase [Bacillus selenitireducens MLS10]
Length = 247
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 25/81 (30%), Gaps = 6/81 (7%)
Query: 1 MIKEL----GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K L TI+GC E +N + + SL + +
Sbjct: 1 MKKYTRSLSVLLAASALTIAGCQNGDEETANHTEADTNQAEEAVEDNEESLS--YPQLKD 58
Query: 57 QLQDTGIVVSRIGDMITCYIP 77
+ + + V +M ++
Sbjct: 59 GVGEDEVEVVMETNMGDIHLK 79
>gi|160885048|ref|ZP_02066051.1| hypothetical protein BACOVA_03045 [Bacteroides ovatus ATCC 8483]
gi|299147735|ref|ZP_07040798.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
gi|156109398|gb|EDO11143.1| hypothetical protein BACOVA_03045 [Bacteroides ovatus ATCC 8483]
gi|298513918|gb|EFI37804.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
Length = 251
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 23/153 (15%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + L++ + ++GC KV K +D DK + +
Sbjct: 46 MKTILLAVGTLCLMAGCSS------KVASSKGIVSDATMNTVTIVTDKNDTLSFSTIDAN 99
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
V + + + V + + +P A+ L ++P + I + D G
Sbjct: 100 KDEV----NGLLLNDTLEVFYTGKYTP---GMP-----ASKLVQYPQSPI-VGGDRDEHG 146
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+ + ++ I+ R SV
Sbjct: 147 C----IGSAGYVWCEVQKDCIRLFEKGIRTESV 175
>gi|59800727|ref|YP_207439.1| ComL [Neisseria gonorrhoeae FA 1090]
gi|194097999|ref|YP_002001047.1| ComL, competence lipoprotein [Neisseria gonorrhoeae NCCP11945]
gi|239998465|ref|ZP_04718389.1| ComL, competence lipoprotein [Neisseria gonorrhoeae 35/02]
gi|240013590|ref|ZP_04720503.1| ComL, competence lipoprotein [Neisseria gonorrhoeae DGI18]
gi|240016029|ref|ZP_04722569.1| ComL, competence lipoprotein [Neisseria gonorrhoeae FA6140]
gi|240080170|ref|ZP_04724713.1| ComL, competence lipoprotein [Neisseria gonorrhoeae FA19]
gi|240112384|ref|ZP_04726874.1| ComL, competence lipoprotein [Neisseria gonorrhoeae MS11]
gi|240115124|ref|ZP_04729186.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID18]
gi|240117407|ref|ZP_04731469.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID1]
gi|240120660|ref|ZP_04733622.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID24-1]
gi|240122964|ref|ZP_04735920.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID332]
gi|240125215|ref|ZP_04738101.1| ComL, competence lipoprotein [Neisseria gonorrhoeae SK-92-679]
gi|240127669|ref|ZP_04740330.1| ComL, competence lipoprotein [Neisseria gonorrhoeae SK-93-1035]
gi|254493185|ref|ZP_05106356.1| competence lipoprotein comL [Neisseria gonorrhoeae 1291]
gi|260441059|ref|ZP_05794875.1| ComL, competence lipoprotein [Neisseria gonorrhoeae DGI2]
gi|268594326|ref|ZP_06128493.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae 35/02]
gi|268596321|ref|ZP_06130488.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae FA19]
gi|268598445|ref|ZP_06132612.1| competence lipoprotein comL [Neisseria gonorrhoeae MS11]
gi|268600799|ref|ZP_06134966.1| competence lipoprotein comL [Neisseria gonorrhoeae PID18]
gi|268603104|ref|ZP_06137271.1| competence lipoprotein comL [Neisseria gonorrhoeae PID1]
gi|268681585|ref|ZP_06148447.1| competence lipoprotein comL [Neisseria gonorrhoeae PID332]
gi|268683813|ref|ZP_06150675.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-92-679]
gi|268686055|ref|ZP_06152917.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-93-1035]
gi|291044391|ref|ZP_06570100.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae DGI2]
gi|293399572|ref|ZP_06643725.1| lipoprotein [Neisseria gonorrhoeae F62]
gi|5921830|sp|Q50985|COML_NEIGO RecName: Full=Competence lipoprotein ComL; Flags: Precursor
gi|1107833|emb|CAA90076.1| ComL, competence lipoprotein [Neisseria gonorrhoeae]
gi|59717622|gb|AAW89027.1| competence lipoprotein [Neisseria gonorrhoeae FA 1090]
gi|193933289|gb|ACF29113.1| ComL, competence lipoprotein [Neisseria gonorrhoeae NCCP11945]
gi|226512225|gb|EEH61570.1| competence lipoprotein comL [Neisseria gonorrhoeae 1291]
gi|268547715|gb|EEZ43133.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae 35/02]
gi|268550109|gb|EEZ45128.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae FA19]
gi|268582576|gb|EEZ47252.1| competence lipoprotein comL [Neisseria gonorrhoeae MS11]
gi|268584930|gb|EEZ49606.1| competence lipoprotein comL [Neisseria gonorrhoeae PID18]
gi|268587235|gb|EEZ51911.1| competence lipoprotein comL [Neisseria gonorrhoeae PID1]
gi|268621869|gb|EEZ54269.1| competence lipoprotein comL [Neisseria gonorrhoeae PID332]
gi|268624097|gb|EEZ56497.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-92-679]
gi|268626339|gb|EEZ58739.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-93-1035]
gi|291011285|gb|EFE03281.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae DGI2]
gi|291610141|gb|EFF39263.1| lipoprotein [Neisseria gonorrhoeae F62]
gi|317163747|gb|ADV07288.1| ComL [Neisseria gonorrhoeae TCDC-NG08107]
gi|1588996|prf||2209423A lipoprotein
Length = 267
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/113 (9%), Positives = 35/113 (30%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L++ + +S C K + + + + L+ + ++L +
Sbjct: 1 MKKILLTVSLGLALSACATQGTADKDAQITQDWSVEKLYAEAQDELNSSNYTRAVKLYEI 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + K L ++ + + P+ A+
Sbjct: 61 LESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALY 113
>gi|298377708|ref|ZP_06987659.1| lipoprotein [Bacteroides sp. 3_1_19]
gi|298265411|gb|EFI07073.1| lipoprotein [Bacteroides sp. 3_1_19]
Length = 263
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
++++ + ++GC +K L S D ++++ D + + +
Sbjct: 1 MRKIASLFVALLLLAGCSSVPLTGRKQVLLVS-DQEVLSSSLTQYNDYIKTAKKSTNANK 59
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVF 87
+V+R+G I ++
Sbjct: 60 SAMVTRVGKKIAAATEDYLRANGMAD 85
>gi|238754231|ref|ZP_04615588.1| Uncharacterized lipoprotein yajG [Yersinia ruckeri ATCC 29473]
gi|238707478|gb|EEP99838.1| Uncharacterized lipoprotein yajG [Yersinia ruckeri ATCC 29473]
Length = 192
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + ++GC +S + D S++ A+ L
Sbjct: 1 MLKKILFPLLAAFILAGCTTSSNTLEVTPKIVLPAQDPTLMGVTISINGADQRQDAALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G ++ + F
Sbjct: 60 ---KVNRDGQLVALTPSRDLRF 78
>gi|254362195|ref|ZP_04978310.1| possible lipoprotein [Mannheimia haemolytica PHL213]
gi|261492211|ref|ZP_05988777.1| putative lipoprotein [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495102|ref|ZP_05991567.1| putative lipoprotein [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|153093767|gb|EDN74706.1| possible lipoprotein [Mannheimia haemolytica PHL213]
gi|261309237|gb|EEY10475.1| putative lipoprotein [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312131|gb|EEY13268.1| putative lipoprotein [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 166
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 18/60 (30%), Gaps = 5/60 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + I + GC S E + +T N + S+ +
Sbjct: 1 MKKSLFVLSLISFALVGCSSNSGES-----TSAVETTEANATWQSADSIQTAPMPASMNQ 55
>gi|60683277|ref|YP_213421.1| putative lipoprotein [Bacteroides fragilis NCTC 9343]
gi|60494711|emb|CAH09513.1| putative lipoprotein [Bacteroides fragilis NCTC 9343]
Length = 406
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 10/158 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQ-MQLQD 60
+K L L + +++ + C +S+++K ++ + F E E + D
Sbjct: 1 MKNLYL-ILVLSALVACTGSSQKEKPACVNTPVEPFTGLPVFDLQEQYPEKEIILQDIAD 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
VV GD I + FL + + ++ S + S+
Sbjct: 60 VRYVVLETGDSSLVGIRPILM-------TDSFLVTVNKKSDVIFFDKSGKYLHSFNHTSM 112
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFA 158
+ ++S D + +R I V G+
Sbjct: 113 SGEEYGDIVSGYCIDEKAREIFIYDGLQSR-IQVYGYG 149
>gi|37679498|ref|NP_934107.1| hypothetical protein VV1314 [Vibrio vulnificus YJ016]
gi|37198242|dbj|BAC94078.1| hypothetical protein [Vibrio vulnificus YJ016]
Length = 855
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 39/135 (28%), Gaps = 25/135 (18%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ ++ ++GC ++ E+ + +
Sbjct: 8 MNKKILSTIIPAMLLAGCSTEENVANTTTGSSTSVVASSQAG--------ENAIITRFIN 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFL----EKKFLPMLQLIATILNKFPSTVIAIQSH 116
+ R D F SE L + ++ L ++P + A+
Sbjct: 60 ANVYADRNQDG----------FPSESELLGTTNAEGQFLVD---NELKQYPLLLQAVAYQ 106
Query: 117 TDSIGTLKNNLLISQ 131
T S+ L+ S
Sbjct: 107 TKSVTKPDEVLIKSA 121
>gi|313675033|ref|YP_004053029.1| hypothetical protein Ftrac_0919 [Marivirga tractuosa DSM 4126]
gi|312941731|gb|ADR20921.1| protein of unknown function DUF1080 [Marivirga tractuosa DSM
4126]
Length = 271
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 7/45 (15%), Positives = 13/45 (28%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS 45
M K L + + I C +E + + V +
Sbjct: 1 MKKSLFIGFIALMAIYACSSEKKENTEDSKDTEAIAEDVQEIAEE 45
>gi|308814885|emb|CBM95496.1| neisserial heparin binding antigen [Neisseria meningitidis]
Length = 494
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Query: 1 MIKELGLSMFIMTTISGC---GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K ++M + +S C G S + K +V + G + E + +
Sbjct: 1 MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPAAPVVTEDVGEEVLPKEKKDEEA 60
Query: 58 LQDTGIVVSRIG 69
+ ++
Sbjct: 61 VSGAPQADTQDA 72
>gi|293606422|ref|ZP_06688781.1| outer membrane multidrug efflux protein OprB [Achromobacter
piechaudii ATCC 43553]
gi|292815180|gb|EFF74302.1| outer membrane multidrug efflux protein OprB [Achromobacter
piechaudii ATCC 43553]
Length = 505
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 3/80 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA---EDEFQMQ 57
MIK+ LS F+ ++GC LA ++ D ++G +
Sbjct: 5 MIKQSALSAFVAVALAGCSLAPDYQRPDAPVTGVWPDQPKVQYGGYNNPTSLGTQPASAV 64
Query: 58 LQDTGIVVSRIGDMITCYIP 77
+ + GI + +G P
Sbjct: 65 VPEAGIPAADLGWREFFRDP 84
>gi|293367110|ref|ZP_06613782.1| ABC superfamily ATP binding cassette transporter, binding protein
[Staphylococcus epidermidis M23864:W2(grey)]
gi|291318840|gb|EFE59214.1| ABC superfamily ATP binding cassette transporter, binding protein
[Staphylococcus epidermidis M23864:W2(grey)]
Length = 491
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/109 (11%), Positives = 31/109 (28%), Gaps = 11/109 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL-- 58
M K + L + I ++ CG S K + + + + +
Sbjct: 1 MKKLITLIVMISFVLASCGGTSSTDKDTLNVEIPLKTKSIAPYETDIPVKTGALESLFKM 60
Query: 59 -QDTGIVV-------SRIGDMITCYIPVHVSFVSEVFLEKKF-LPMLQL 98
++ + + + I ++ F + L + L+
Sbjct: 61 SKNGKVKPLLVKNYHQVSDNQLELTIKDNIKFQNGHHLTGEAVKRSLEE 109
>gi|295401595|ref|ZP_06811563.1| extracellular solute-binding protein family 1 [Geobacillus
thermoglucosidasius C56-YS93]
gi|312110888|ref|YP_003989204.1| extracellular solute-binding protein family 1 [Geobacillus sp.
Y4.1MC1]
gi|294976362|gb|EFG51972.1| extracellular solute-binding protein family 1 [Geobacillus
thermoglucosidasius C56-YS93]
gi|311215989|gb|ADP74593.1| extracellular solute-binding protein family 1 [Geobacillus sp.
Y4.1MC1]
Length = 462
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 9/74 (12%)
Query: 1 MIKELGLSM----FIMTTISGC----GLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED 52
M K + + + +SGC + E KV K+ R + L KA +
Sbjct: 4 MRKRIAVLLSTLLMAAGVLSGCGKSDSSGNEENGKVVTIKAQTIGAELTRVEN-LKKAAE 62
Query: 53 EFQMQLQDTGIVVS 66
+ +L++ G +
Sbjct: 63 KLNQELKEQGKDIQ 76
>gi|57865477|ref|YP_189550.1| ABC transporter substrate-binding protein [Staphylococcus
epidermidis RP62A]
gi|251811892|ref|ZP_04826365.1| ABC superfamily ATP binding cassette transporter, binding protein
[Staphylococcus epidermidis BCM-HMP0060]
gi|57636135|gb|AAW52923.1| ABC transporter, substrate-binding protein [Staphylococcus
epidermidis RP62A]
gi|251804571|gb|EES57228.1| ABC superfamily ATP binding cassette transporter, binding protein
[Staphylococcus epidermidis BCM-HMP0060]
gi|329734548|gb|EGG70859.1| ABC transporter, substrate-binding protein, family 5
[Staphylococcus epidermidis VCU045]
Length = 491
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/109 (10%), Positives = 31/109 (28%), Gaps = 11/109 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL-- 58
M K + L + I ++ CG S K + + + + +
Sbjct: 1 MKKLITLIVMISFVLASCGGTSSTDKDTLNVEIPLKTKSIAPYETDIPVKTGALESLFKM 60
Query: 59 -QDTGIVV-------SRIGDMITCYIPVHVSFVSEVFLEKKF-LPMLQL 98
++ + + + + ++ F + L + L+
Sbjct: 61 SKNGKVKPLLVKNYHQVSDNQLELTLKDNIKFQNGHHLTGEAVKRSLEE 109
>gi|27468899|ref|NP_765536.1| nickel ABC transporter nickel-binding protein [Staphylococcus
epidermidis ATCC 12228]
gi|27316447|gb|AAO05622.1|AE016750_227 nickel ABC transporter nickel-binding protein [Staphylococcus
epidermidis ATCC 12228]
gi|329733824|gb|EGG70148.1| ABC transporter, substrate-binding protein, family 5
[Staphylococcus epidermidis VCU028]
Length = 491
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/109 (10%), Positives = 31/109 (28%), Gaps = 11/109 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL-- 58
M K + L + I ++ CG S K + + + + +
Sbjct: 1 MKKLITLIVMISFVLASCGGTSSTDKDTLNVEIPLKTKSIAPYETDIPVKTGALESLFKM 60
Query: 59 -QDTGIVV-------SRIGDMITCYIPVHVSFVSEVFLEKKF-LPMLQL 98
++ + + + + ++ F + L + L+
Sbjct: 61 SKNGKVKPLLVKNYHQVSDNQLELTLKDNIKFQNGHHLTGEAVKRSLEE 109
>gi|323344909|ref|ZP_08085133.1| hypothetical protein HMPREF0663_11669 [Prevotella oralis ATCC
33269]
gi|323094179|gb|EFZ36756.1| hypothetical protein HMPREF0663_11669 [Prevotella oralis ATCC
33269]
Length = 162
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 1 MIK--ELGLSMFIMTTISGCGLASREKKK 27
M+K +L L F++ ++ C +S +
Sbjct: 1 MMKTIKLFLLAFVLCLLAACSSSSDDNGT 29
>gi|304316247|ref|YP_003851392.1| extracellular solute-binding protein family 1
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302777749|gb|ADL68308.1| extracellular solute-binding protein family 1
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 440
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 4/89 (4%)
Query: 5 LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIV 64
L L M ISGCG S ++ K T+ NK + + + E + LQ+
Sbjct: 12 LVLLMAFSVLISGCGSKSTDQNNTSQSK---TETTNKSVTLDIFQFKVEIKDALQNAINT 68
Query: 65 VSRIGDMITCYIPVHVSFVS-EVFLEKKF 92
+ + + L+ KF
Sbjct: 69 YMKENPNVKINLETVGGGQDYGAALKAKF 97
>gi|242243797|ref|ZP_04798241.1| ABC superfamily ATP binding cassette transporter, binding protein
[Staphylococcus epidermidis W23144]
gi|242232765|gb|EES35077.1| ABC superfamily ATP binding cassette transporter, binding protein
[Staphylococcus epidermidis W23144]
Length = 491
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 11/109 (10%), Positives = 31/109 (28%), Gaps = 11/109 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL-- 58
M K + L + I ++ CG S K + + + + +
Sbjct: 1 MKKLITLIVMISFVLASCGGTSSTDKDTLNVEIPLKTKSIAPYETDIPVKTGALESLFKM 60
Query: 59 -QDTGIVV-------SRIGDMITCYIPVHVSFVSEVFLEKKF-LPMLQL 98
++ + + + + ++ F + L + L+
Sbjct: 61 SKNGKVKPLLVKKYHQVSDNQLELTLKDNIKFQNGHHLTGEAVKRSLEE 109
>gi|229148942|ref|ZP_04277187.1| hypothetical protein bcere0011_5110 [Bacillus cereus m1550]
gi|228634482|gb|EEK91066.1| hypothetical protein bcere0011_5110 [Bacillus cereus m1550]
Length = 173
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 10/127 (7%), Positives = 35/127 (27%), Gaps = 10/127 (7%)
Query: 1 MIKELGLSMF-----IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAED--- 52
M+K + F +M +SGC ++ +K +++ + ++ ++
Sbjct: 1 MMKRISSLFFSSLLVLMLILSGCAGKEQKTEKQTGNQATSVEKISDNILDEMEGPPKNGH 60
Query: 53 EFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVF--LEKKFLPMLQLIATILNKFPSTV 110
+ + + + ++ + I L
Sbjct: 61 TIERHVGKSEEDLKNRLKTDKVSAASTYYDKETATKAVKDSLKQHDKEIQDWLKNSKEAR 120
Query: 111 IAIQSHT 117
+ + +
Sbjct: 121 LVLNTTH 127
>gi|319401693|gb|EFV89902.1| bacterial extracellular solute-binding s, family 5 Middle family
protein [Staphylococcus epidermidis FRI909]
Length = 491
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 11/109 (10%), Positives = 31/109 (28%), Gaps = 11/109 (10%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL-- 58
M K + L + I ++ CG S K + + + + +
Sbjct: 1 MKKLITLIVMISFVLASCGGTSSTDKDTLNVEIPLKTKSIAPYETDIPVKTGALESLFKM 60
Query: 59 -QDTGIVV-------SRIGDMITCYIPVHVSFVSEVFLEKKF-LPMLQL 98
++ + + + + ++ F + L + L+
Sbjct: 61 SKNGKVKPLLVKKYHQVSDNQLELTLKDNIKFQNGHHLTGEAVKRSLEE 109
>gi|301383150|ref|ZP_07231568.1| hypothetical protein PsyrptM_10962 [Pseudomonas syringae pv. tomato
Max13]
gi|302063738|ref|ZP_07255279.1| hypothetical protein PsyrptK_27459 [Pseudomonas syringae pv. tomato
K40]
gi|302133788|ref|ZP_07259778.1| hypothetical protein PsyrptN_20459 [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 987
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 800 DLGSVSFAPGASDLSVEAKKALDKLSAALKERPDLKLEIEG 840
>gi|325679959|ref|ZP_08159528.1| putative lipoprotein [Ruminococcus albus 8]
gi|324108397|gb|EGC02644.1| putative lipoprotein [Ruminococcus albus 8]
Length = 174
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 28/87 (32%), Gaps = 2/87 (2%)
Query: 2 IKELGL--SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K++ + ++ + + GCG +KK + D + G + + +
Sbjct: 1 MKKMIVLTAVCMALMLCGCGSKGSAEKKEDVTALTTADEMMTSDGHTTENFSIPPRETFA 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEV 86
+ + D + I +
Sbjct: 61 EVPAEAEQSFDSVIQIIDKTFPKAKKS 87
>gi|307731300|ref|YP_003908524.1| hypothetical protein BC1003_3286 [Burkholderia sp. CCGE1003]
gi|307585835|gb|ADN59233.1| Protein of unknown function DUF2242 [Burkholderia sp. CCGE1003]
Length = 270
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 21/72 (29%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ K S + ++ C K + L ++ + S D E + L
Sbjct: 5 LFKTTVASFCGLMLLAACSSTPTPKFQQELFETGASPYARNFNSSVTDTCEAARRALLSQ 64
Query: 61 TGIVVSRIGDMI 72
+ D +
Sbjct: 65 GYLTTMTRNDTV 76
>gi|262276120|ref|ZP_06053929.1| hypothetical protein VHA_003103 [Grimontia hollisae CIP 101886]
gi|262219928|gb|EEY71244.1| hypothetical protein VHA_003103 [Grimontia hollisae CIP 101886]
Length = 253
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 34/79 (43%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+ GL + +SGC + S+E+ + L+ ++ + + + L+++ Q Q+
Sbjct: 1 MLTRSGLLILFSAALSGCSVTSQEQHQQTLNAISNIETNIQANYALLNESVKSQQAQIAT 60
Query: 61 TGIVVSRIGDMITCYIPVH 79
V+ + D +
Sbjct: 61 LEQQVANMSDTLKIMRQNQ 79
>gi|213966640|ref|ZP_03394791.1| hypothetical protein PSPTOT1_0398 [Pseudomonas syringae pv. tomato
T1]
gi|213928490|gb|EEB62034.1| hypothetical protein PSPTOT1_0398 [Pseudomonas syringae pv. tomato
T1]
Length = 1002
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 815 DLGSVSFAPGASDLSVEAKKALDKLSAALKERPDLKLEIEG 855
>gi|160874731|ref|YP_001554047.1| decaheme cytochrome c MtrF [Shewanella baltica OS195]
gi|160860253|gb|ABX48787.1| decaheme cytochrome c MtrF [Shewanella baltica OS195]
gi|315266973|gb|ADT93826.1| decaheme c-type cytochrome, OmcA/MtrC family [Shewanella baltica
OS678]
Length = 639
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 25/93 (26%), Gaps = 5/93 (5%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + L + +++ +S CG + + + +DK +
Sbjct: 7 MSTQFSLMLALVSLLSACGGDKGQDGNPGEP-AKPPALTITSLNVMVDKV--AVTDGIAK 63
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL 93
VS D +P L +
Sbjct: 64 VDFQVSNQDDEAVIGVPSATFIA--AQLLPQGY 94
>gi|28871617|ref|NP_794236.1| hypothetical protein PSPTO_4482 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28854869|gb|AAO57931.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 1002
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 815 DLGSVSFAPGASDLSVEAKKALDKLSAALKERPDLKLEIEG 855
>gi|15644750|ref|NP_206920.1| hypothetical protein HP0120 [Helicobacter pylori 26695]
gi|2313211|gb|AAD07196.1| predicted coding region HP0120 [Helicobacter pylori 26695]
Length = 398
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 37/111 (33%), Gaps = 6/111 (5%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K GL++ ++ C +K+ + + + R S + E E + + +G
Sbjct: 103 KYSGLTIAASLLLAACSAGDTDKQIELEQEKKEAENARDRANKSGIELEQE-RQKTNKSG 161
Query: 63 IV-----VSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
I + + + S + LE++ + ++ +
Sbjct: 162 IELANSQIKAEQERQKTEQEKQKANKSAIELEQQKQKTINTQRDLIKEQKD 212
>gi|109897907|ref|YP_661162.1| peptidyl-dipeptidase Dcp [Pseudoalteromonas atlantica T6c]
gi|109700188|gb|ABG40108.1| peptidyl-dipeptidase Dcp, Metallo peptidase, MEROPS family M03A
[Pseudoalteromonas atlantica T6c]
Length = 736
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 35/142 (24%), Gaps = 12/142 (8%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + + ++ C + + + + + K
Sbjct: 1 MKKALLSPVALAVMLAACQPDTASQTNQNAAQQKASQQDTSPLNGDITKNNPLLAESNAP 60
Query: 61 TGI------VVSRIGDMITCYIPVHVSFVSEVFLEKKF------LPMLQLIATILNKFPS 108
G+ + I + + ++ L + + ++ LN +
Sbjct: 61 FGVPEFSKIKIEHYEPAFDFAIAQNQQEIDDIALSSEAPTFENTIEAMEKSGQALNHVAT 120
Query: 109 TVIAIQSHTDSIGTLKNNLLIS 130
A+ S +S
Sbjct: 121 VFYALNGTDTSTEMQSIAKKMS 142
>gi|322386554|ref|ZP_08060181.1| hypothetical protein HMPREF9422_1546 [Streptococcus cristatus
ATCC 51100]
gi|321269473|gb|EFX52406.1| hypothetical protein HMPREF9422_1546 [Streptococcus cristatus
ATCC 51100]
Length = 185
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 1/99 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS-LDKAEDEFQMQLQ 59
M K + L M + ++ CG S K S L++ +
Sbjct: 1 MKKSVVLLMASLAVLTACGQQSHSGKAGSNQSVQSKAKDKSVTKSYQLNQKVQGLDQTMT 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQL 98
T + + + I ++ ++ L + L LQ
Sbjct: 61 LTVTYAGKKYEKVNIAISQNLPEEAKSALASQDLSSLQE 99
>gi|269122271|ref|YP_003310448.1| redoxin [Sebaldella termitidis ATCC 33386]
gi|268616149|gb|ACZ10517.1| Redoxin domain protein [Sebaldella termitidis ATCC 33386]
Length = 223
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ ++ + I CG+ ++ + K+ +T V+ +L K + ++
Sbjct: 1 MKKFMIAAMTIFLIFSCGVK---EEGAAVEKTTETKEVSAPEKETLKKEKVPESEKVTVD 57
Query: 62 GIVVSRIGDMITC 74
GI V+ I
Sbjct: 58 GIEVTIENKRIKV 70
>gi|228950055|ref|ZP_04112240.1| hypothetical protein bthur0007_61270 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228809582|gb|EEM56018.1| hypothetical protein bthur0007_61270 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 156
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 3/116 (2%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + + ++GCG + SL+ A+ +F++ +
Sbjct: 1 MKKVSILLVAVCFFLTGCGEDPENTISNIASTIEKNTGIQNLHTLSLENAKKQFKISEEV 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEK---KFLPMLQLIATILNKFPSTVIAI 113
VV E +L+ K Q +A+ + K ++ I
Sbjct: 61 ETFVVRTTYTDADLTEYGVFYVNDEKYLKDVKNKIKKHTQEVASRMKKVDNSYYDI 116
>gi|163741431|ref|ZP_02148822.1| Outer membrane protein, OmpA/MotB family [Phaeobacter gallaeciensis
2.10]
gi|161385165|gb|EDQ09543.1| Outer membrane protein, OmpA/MotB family [Phaeobacter gallaeciensis
2.10]
Length = 624
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 4/92 (4%)
Query: 74 CYIPVHVSFVSEVFLEKKFLPML----QLIATILNKFPSTVIAIQSHTDSIGTLKNNLLI 129
+ + L + ++ + P V I+ HTD++G NL +
Sbjct: 505 ITVQSINFETGSAVIRAAEAEELAALGNALRDMIAQNPQEVFLIEGHTDAVGAAPFNLAL 564
Query: 130 SQERADVIKSYLIQRGVSSNRFISVRGFAYKY 161
S RA+ + L + + V+G+
Sbjct: 565 SDRRAESVALALTEYFKVPPENMVVQGYGETD 596
>gi|3628769|gb|AAD05536.1| deca-heme c-type cytochrome [Shewanella putrefaciens]
Length = 639
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 21/86 (24%), Gaps = 5/86 (5%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
L + I T +S CG + + ++ + + VS
Sbjct: 13 LMLLIATLLSACGGSDGD---DGSPGEPGKPPAMTISSLNISVDKVAISDGIAQVDYQVS 69
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKF 92
+ IP L +
Sbjct: 70 NQENQAVVGIPSATFIA--AQLLPQG 93
>gi|24373346|ref|NP_717389.1| decaheme cytochrome c MtrF [Shewanella oneidensis MR-1]
gi|24347603|gb|AAN54833.1|AE015622_2 decaheme cytochrome c MtrF [Shewanella oneidensis MR-1]
Length = 639
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 21/86 (24%), Gaps = 5/86 (5%)
Query: 7 LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVS 66
L + I T +S CG + + ++ + + VS
Sbjct: 13 LMLLIATLLSACGGSDGD---DGSPGEPGKPPAMTISSLNISVDKVAISDGIAQVDYQVS 69
Query: 67 RIGDMITCYIPVHVSFVSEVFLEKKF 92
+ IP L +
Sbjct: 70 NQENQAVVGIPSATFIA--AQLLPQG 93
>gi|89100236|ref|ZP_01173103.1| possible D-amino acid dehydrogenase, large subunit [Bacillus sp.
NRRL B-14911]
gi|89085086|gb|EAR64220.1| possible D-amino acid dehydrogenase, large subunit [Bacillus sp.
NRRL B-14911]
Length = 476
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 35/111 (31%), Gaps = 12/111 (10%)
Query: 1 MIKE-LGLSMFIMTTISGCG---LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M+K+ + L + ++ ++GC + + S D + K + DE
Sbjct: 1 MLKKYMLLMLTVLFVLAGCSGEKKVDKAEPARSDAGSADQKMAGKDNEEEGSEVTDEIST 60
Query: 57 QLQDTGIVVSRIGDMITCYIPVHV--------SFVSEVFLEKKFLPMLQLI 99
+ + + R + F + + + F +Q +
Sbjct: 61 VVIPSTVEEFRNAEPGLLTKDFSYEKETALWPDFNTLSGIREDFEGHMQKV 111
>gi|299541710|ref|ZP_07052040.1| amino-acid ABC transporter extracellular-binding protein yqiX
precursor [Lysinibacillus fusiformis ZC1]
gi|298725805|gb|EFI66439.1| amino-acid ABC transporter extracellular-binding protein yqiX
precursor [Lysinibacillus fusiformis ZC1]
Length = 264
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 10/92 (10%), Positives = 27/92 (29%), Gaps = 7/92 (7%)
Query: 1 MIKELGLSMFIMT--TISGCGLASREKKKVFLHKSNDTDIV----NKRFGSSLDKAEDEF 54
M +L + M ++ ++ CG + V + + +
Sbjct: 1 MKNKLFIMMLVLVIGVLAACGTKDNNASDTGSTTDTEGKQVLKVGTSADYAPFEYVDAAK 60
Query: 55 QMQLQDTGIV-VSRIGDMITCYIPVHVSFVSE 85
++ I + +G+ I + V +
Sbjct: 61 GEEIIGFDIDLIKLVGEKIGVDMQVQDMDFNS 92
>gi|239993443|ref|ZP_04713967.1| metalloendopeptidase PepO [Alteromonas macleodii ATCC 27126]
Length = 688
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 5/51 (9%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 1 MIKELGLSMFIMTTISGCG---LASREKKKVFLHKSNDTDIVNKRFGSSLD 48
M++ + LS+ + ++ C ++ ++ + + + + ++D
Sbjct: 1 MLRSV-LSLSVALALTACSPQNSSTEQQTQSAATEEAQQQLSSGVIKENMD 50
>gi|228937469|ref|ZP_04100113.1| hypothetical protein bthur0008_1530 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228970357|ref|ZP_04131014.1| hypothetical protein bthur0003_1530 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228976927|ref|ZP_04137337.1| hypothetical protein bthur0002_1530 [Bacillus thuringiensis
Bt407]
gi|228782779|gb|EEM30947.1| hypothetical protein bthur0002_1530 [Bacillus thuringiensis
Bt407]
gi|228789349|gb|EEM37271.1| hypothetical protein bthur0003_1530 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228822188|gb|EEM68172.1| hypothetical protein bthur0008_1530 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326937961|gb|AEA13857.1| ABC transporter substrate-binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 270
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Query: 2 IKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K++ LS+ + + C +S ++ K K + +K ++
Sbjct: 1 MKKVLLSIVSGAVLLLGACSASSDKEVKALDEKKITVGVTGGPHEQIFEKVKEVAAKDGL 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ I V + V+ +
Sbjct: 61 EIDIKVFNDYVAPNVSLDEKSLDVNSYQTKS 91
>gi|228954815|ref|ZP_04116835.1| Periplasmic binding protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229072048|ref|ZP_04205257.1| Periplasmic binding protein [Bacillus cereus F65185]
gi|229081799|ref|ZP_04214291.1| Periplasmic binding protein [Bacillus cereus Rock4-2]
gi|228701387|gb|EEL53881.1| Periplasmic binding protein [Bacillus cereus Rock4-2]
gi|228710982|gb|EEL62948.1| Periplasmic binding protein [Bacillus cereus F65185]
gi|228804804|gb|EEM51403.1| Periplasmic binding protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 291
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ I+GC +E K +S + + +D E +
Sbjct: 1 MKKIASVLMAIILLMGIAGCSSPKKESAKQVKSESKEHVVATTVAVTEIMDALEVDL 57
>gi|197118152|ref|YP_002138579.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
gi|197087512|gb|ACH38783.1| TPR domain lipoprotein [Geobacter bemidjiensis Bem]
Length = 882
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
M+K+ L + I+ T +GC ++E + + + E +
Sbjct: 1 MMKKFCLVLVILLTCAGCSSKTKESLYNEGKQQLEASNPGAAVVFFKNALEKD 53
>gi|301051909|ref|YP_003790120.1| ABC transporter substrate-binding protein [Bacillus anthracis CI]
gi|300374078|gb|ADK02982.1| ABC transporter, substrate-binding protein [Bacillus cereus
biovar anthracis str. CI]
Length = 270
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 10/91 (10%), Positives = 27/91 (29%), Gaps = 2/91 (2%)
Query: 2 IKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K++ LS+ + + C S ++ K K + +K ++
Sbjct: 1 MKKVLLSIVSGAVLLLGACSAGSDKEVKALDEKKITVGVTGGPHEQIFEKVKEVAAKDGL 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ + V + V+ +
Sbjct: 61 EIDVKVFNDYVAPNVSLDEKGLDVNSYQTKS 91
>gi|291522874|emb|CBK81167.1| ABC-type metal ion transport system, periplasmic component/surface
antigen [Coprococcus catus GD/7]
Length = 300
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 12/108 (11%), Positives = 27/108 (25%), Gaps = 24/108 (22%)
Query: 1 MIKELGLSMFIMTT----ISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K L + ++ CG ++ + ++ + G
Sbjct: 1 MKKRLLAGVLAGVLAVGALTACGSSNPQSSTAAQTEAGTEAAGTEAAGE----------- 49
Query: 57 QLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILN 104
+ + I V S + ++ P+L L
Sbjct: 50 ---------TTAANGELTPIKVAASATPHAEILEQAKPLLAEQGYDLQ 88
>gi|237744189|ref|ZP_04574670.1| acriflavin resistance periplasmic protein [Fusobacterium sp. 7_1]
gi|229431418|gb|EEO41630.1| acriflavin resistance periplasmic protein [Fusobacterium sp. 7_1]
Length = 369
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 20/51 (39%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE 51
M K L + + + + CG EKK+ ++ TD + + +
Sbjct: 1 MKKILTIFLAVSLLLVACGKDKEEKKETTKQEATVTDEQKSVKSVEVAEVK 51
>gi|227512905|ref|ZP_03942954.1| possible pheromone lipoprotein CamS [Lactobacillus buchneri ATCC
11577]
gi|227083905|gb|EEI19217.1| possible pheromone lipoprotein CamS [Lactobacillus buchneri ATCC
11577]
Length = 385
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 34/106 (32%), Gaps = 13/106 (12%)
Query: 1 MIKELGLSMFIMT---TISGCGLA---SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
++K++ L + ++ +S CG S + K+ G ++
Sbjct: 5 ILKKIFLGISVILTGILLSACGSVDNLSNDTNSSGSSKAKTQLTGQTNTGYYQGVIKNGR 64
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVS-------FVSEVFLEKKFL 93
+ G+ V + + + F ++ ++ ++
Sbjct: 65 YQTSKSRGVSVQQESNQFNIKGFENGLLNISKKQFSTKKYIFQEGQ 110
>gi|222529891|ref|YP_002573773.1| hypothetical protein Athe_1912 [Caldicellulosiruptor bescii DSM
6725]
gi|222456738|gb|ACM61000.1| conserved hypothetical protein [Caldicellulosiruptor bescii DSM
6725]
Length = 198
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 1 MIKE----------LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA 50
M+K+ + L++F++ T++GC +S + K I ++ + +
Sbjct: 1 MMKQTCKLVRISAVITLAIFLVFTLAGCSSSSDDINKKVRIVLVGNFIGDENAQKLISEL 60
Query: 51 EDEFQMQL 58
E + ++
Sbjct: 61 EKKSGDKV 68
>gi|160941180|ref|ZP_02088517.1| hypothetical protein CLOBOL_06073 [Clostridium bolteae ATCC
BAA-613]
gi|158435741|gb|EDP13508.1| hypothetical protein CLOBOL_06073 [Clostridium bolteae ATCC
BAA-613]
Length = 555
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Query: 1 MIKELGLSMFIMT---TISGCGLASREKK-KVFLHKSNDTDIVNKRFGSSL 47
M K+L L + T++GCG A +++ + G +
Sbjct: 1 MKKKLSLLLCAALTATTLAGCGQAQSSPAGTDAGTEASAAGTAGSKEGEKI 51
>gi|154497103|ref|ZP_02035799.1| hypothetical protein BACCAP_01396 [Bacteroides capillosus ATCC
29799]
gi|150273502|gb|EDN00630.1| hypothetical protein BACCAP_01396 [Bacteroides capillosus ATCC
29799]
Length = 700
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 1 MIKELG---LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS 45
M K+L L + ++ +++ C + E T+ G+
Sbjct: 1 MKKKLLAFVLCLAMVFSLAACTTGTTEPSGTPSASPEGTEATGGVSGT 48
>gi|331016657|gb|EGH96713.1| hypothetical protein PLA106_11510 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 987
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 800 DLGSVSFAPGASDLSVEAKKALDKLSAALKERPDLKLEIEG 840
>gi|313680703|ref|YP_004058442.1| hypothetical protein Ocepr_1817 [Oceanithermus profundus DSM
14977]
gi|313153418|gb|ADR37269.1| hypothetical protein Ocepr_1817 [Oceanithermus profundus DSM
14977]
Length = 328
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 20/76 (26%), Gaps = 6/76 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M + G+ ++ ++ C L D + L+ F+
Sbjct: 1 MKRYFGMMALLVLVLAACSTT------GTLGDGESLDAEQLAIETDLNLDAAIFEDLGGA 54
Query: 61 TGIVVSRIGDMITCYI 76
V + D +
Sbjct: 55 AAASVQSVEDQDVADL 70
>gi|302185439|ref|ZP_07262112.1| hypothetical protein Psyrps6_03814 [Pseudomonas syringae pv.
syringae 642]
Length = 994
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 807 DLGSVSFAPGASDLSAEAQNALDKLSVALKERPDLKLEIEG 847
>gi|323527648|ref|YP_004229801.1| hypothetical protein BC1001_3327 [Burkholderia sp. CCGE1001]
gi|323384650|gb|ADX56741.1| Protein of unknown function DUF2242 [Burkholderia sp. CCGE1001]
Length = 242
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 23/72 (31%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+ K S+ + ++ C A K + L ++ + S D E + L
Sbjct: 5 LFKTAAASLCGLFMLAACSSAPTPKFQQELFETGASPYARNFNSSVTDTCEAARRALLSQ 64
Query: 61 TGIVVSRIGDMI 72
+ D +
Sbjct: 65 GYLTTMTRNDTV 76
>gi|298345479|ref|YP_003718166.1| ABC transporter [Mobiluncus curtisii ATCC 43063]
gi|298235540|gb|ADI66672.1| ABC superfamily ATP binding cassette transporter [Mobiluncus
curtisii ATCC 43063]
Length = 327
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 34/114 (29%), Gaps = 14/114 (12%)
Query: 2 IKELGLSMFI---MTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEFQMQ 57
++ + +S+F+ ++ C + K + + LD+A F+
Sbjct: 1 MRRIIVSIFVGVAALALASCSSSDGAKGGAAGSDGGYKVAIAQYASFPPLDEAVAGFKDA 60
Query: 58 LQDTGIVVSRI-----GDMITCYIPVHVSFVSEVFL-----EKKFLPMLQLIAT 101
+Q G+ VS GD + L + Q +
Sbjct: 61 VQQAGLDVSYDVSNAQGDQTNVNSIASKYASGDYDLVFAIATPMAQSIAQNVVD 114
>gi|34498238|ref|NP_902453.1| hypothetical protein CV_2783 [Chromobacterium violaceum ATCC
12472]
gi|34104091|gb|AAQ60451.1| hypothetical protein CV_2783 [Chromobacterium violaceum ATCC
12472]
Length = 61
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 6/57 (10%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDT---DIVNKRFGSSLDKAEDEFQ 55
+K+ + + + ++GC K + G++++K+ + +
Sbjct: 1 MKKTMVCLSLALLLAGCNTVQGIKADAKEGGQAVGHGLQKAGQAVGNAVEKSGEAIK 57
>gi|46907054|ref|YP_013443.1| hypothetical protein LMOf2365_0840 [Listeria monocytogenes
serotype 4b str. F2365]
gi|47093893|ref|ZP_00231634.1| lipoprotein, putative [Listeria monocytogenes str. 4b H7858]
gi|226223441|ref|YP_002757548.1| hypothetical protein Lm4b_00839 [Listeria monocytogenes
Clip81459]
gi|254823909|ref|ZP_05228910.1| conserved hypothetical protein [Listeria monocytogenes FSL
J1-194]
gi|254852314|ref|ZP_05241662.1| conserved hypothetical protein [Listeria monocytogenes FSL
R2-503]
gi|254931204|ref|ZP_05264563.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|255521440|ref|ZP_05388677.1| hypothetical protein LmonocFSL_09480 [Listeria monocytogenes FSL
J1-175]
gi|300765814|ref|ZP_07075789.1| lipoprotein [Listeria monocytogenes FSL N1-017]
gi|46880320|gb|AAT03620.1| conserved hypothetical protein [Listeria monocytogenes serotype
4b str. F2365]
gi|47017736|gb|EAL08528.1| lipoprotein, putative [Listeria monocytogenes str. 4b H7858]
gi|225875903|emb|CAS04607.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258605620|gb|EEW18228.1| conserved hypothetical protein [Listeria monocytogenes FSL
R2-503]
gi|293582752|gb|EFF94784.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|293593135|gb|EFG00896.1| conserved hypothetical protein [Listeria monocytogenes FSL
J1-194]
gi|300513508|gb|EFK40580.1| lipoprotein [Listeria monocytogenes FSL N1-017]
gi|328467098|gb|EGF38188.1| hypothetical protein LM1816_04983 [Listeria monocytogenes 1816]
gi|328475525|gb|EGF46284.1| hypothetical protein LM220_13027 [Listeria monocytogenes 220]
gi|332311228|gb|EGJ24323.1| Lipoprotein [Listeria monocytogenes str. Scott A]
Length = 220
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 10/99 (10%), Positives = 33/99 (33%), Gaps = 12/99 (12%)
Query: 1 MIKELGLSMF-IMTTISGCGLASREKKKVFLHKSN------DTDIVNKRFGSSLDKAEDE 53
M K + + ++ ++GC + K ++ + + S D+ E +
Sbjct: 1 MKKIIFAVVLSLVLILAGCADVTNTVKVDKKGEATISFDIDISSVAGIFASSYSDEVEAK 60
Query: 54 FQMQLQDTGIVVSRIGDMIT-CYIPVHVSFVSEVFLEKK 91
+ G V + + + + ++ ++ +
Sbjct: 61 LKEA----GFTVDKKSNTSYHIEKKLDKNETTKSDMKPE 95
>gi|226946301|ref|YP_002801374.1| hypothetical protein Avin_42760 [Azotobacter vinelandii DJ]
gi|226721228|gb|ACO80399.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
Length = 981
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 5/45 (11%), Positives = 12/45 (26%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDS 119
+ L+ L + L + P + I+ +
Sbjct: 794 DLSQVEFGPGSSELDAAAQRSLDALGKALKERPQLRLEIEGTSVQ 838
>gi|332289962|ref|YP_004420814.1| hypothetical protein UMN179_01902 [Gallibacterium anatis UMN179]
gi|330432858|gb|AEC17917.1| hypothetical protein UMN179_01902 [Gallibacterium anatis UMN179]
Length = 133
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 23/70 (32%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ + I+T ++ C L +++ + + D+ + D
Sbjct: 1 MKKFLIVFSIVTLLTACALTPEQQRAREEAQIRQQQALQVALAKQCDEETAYLMKRQFDQ 60
Query: 62 GIVVSRIGDM 71
I ++
Sbjct: 61 DIGLTEKEQK 70
>gi|257415840|ref|ZP_05592834.1| predicted protein [Enterococcus faecalis AR01/DG]
gi|257157668|gb|EEU87628.1| predicted protein [Enterococcus faecalis ARO1/DG]
Length = 134
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K LGL + I+ ++GC + +++V + KS + D + + + +
Sbjct: 1 MSKCLGL-LVILFVLTGCSGSRNSQQEVVIEKSANNDKARQFVDQKNPHLGTQLEAESYT 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVS 84
+ + + + +
Sbjct: 60 KQEAIEFLQNGLGIPTNDSAFHYT 83
>gi|238919008|ref|YP_002932522.1| hypothetical protein NT01EI_1075 [Edwardsiella ictaluri 93-146]
gi|238868576|gb|ACR68287.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 194
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K+ + + + ++GC S D + + S++ A+ L
Sbjct: 3 MLKKFFIPLLALIALAGCASHSTTLNINPQMALPQQDPMLRGITISINGADMRQDKALA- 61
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R G ++T + F
Sbjct: 62 ---KVNRDGQLVTLTAQRDLRF 80
>gi|228475600|ref|ZP_04060318.1| manganese ABC transporter substrate-binding lipoprotein
[Staphylococcus hominis SK119]
gi|228270382|gb|EEK11817.1| manganese ABC transporter substrate-binding lipoprotein
[Staphylococcus hominis SK119]
Length = 309
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 1 MIKELGLSMFIMTTISGCGLASREK 25
M K + L + +M ++ C S E+
Sbjct: 1 MKKFIPLLIALMLVLAACSSNSNEQ 25
>gi|227523033|ref|ZP_03953082.1| possible pheromone lipoprotein CamS [Lactobacillus hilgardii ATCC
8290]
gi|227089851|gb|EEI25163.1| possible pheromone lipoprotein CamS [Lactobacillus hilgardii ATCC
8290]
Length = 385
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 34/106 (32%), Gaps = 13/106 (12%)
Query: 1 MIKELGLSMFIMT---TISGCGLA---SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
++K++ L + ++ +S CG S + K+ G ++
Sbjct: 5 ILKKIFLGISVILTGILLSACGSVDNLSNDTNSSGSSKAKTQLTGQTNTGYYQGVIKNGR 64
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVS-------FVSEVFLEKKFL 93
+ G+ V + + + F ++ ++ ++
Sbjct: 65 YQTSKSRGVSVQQESNQFNIKGFENGLLNISKKQFSTKKYIFQEGQ 110
>gi|254825050|ref|ZP_05230051.1| lipoprotein [Listeria monocytogenes FSL J1-194]
gi|255520897|ref|ZP_05388134.1| lipoprotein, putative [Listeria monocytogenes FSL J1-175]
gi|293594292|gb|EFG02053.1| lipoprotein [Listeria monocytogenes FSL J1-194]
Length = 120
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 6/43 (13%), Positives = 14/43 (32%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF 43
M K + F ++ C ++E + + + V
Sbjct: 1 MKKTSIIFTFCALLLTACSTTTKETPRQTTEATGTIEQVETES 43
>gi|302388436|ref|YP_003824258.1| hypothetical protein Closa_4129 [Clostridium saccharolyticum WM1]
gi|302199064|gb|ADL06635.1| hypothetical protein Closa_4129 [Clostridium saccharolyticum WM1]
Length = 215
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 7/98 (7%), Positives = 29/98 (29%), Gaps = 15/98 (15%)
Query: 2 IKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K+ + +++ + CG + + + V + T +A + +
Sbjct: 1 MKKTWMIVMAVCAAFLFTACGKSEKNTESVANTGTETTAPAT--------EATEAVSQEA 52
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPML 96
G + + + + ++ ++
Sbjct: 53 PGNGAEFKILTGKVREVADN----LGSMTIQSGDKELI 86
>gi|253584023|ref|ZP_04861221.1| predicted protein [Fusobacterium varium ATCC 27725]
gi|251834595|gb|EES63158.1| predicted protein [Fusobacterium varium ATCC 27725]
Length = 136
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 18/112 (16%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + T + GC K + + K E + +D
Sbjct: 6 MYKKIATFLAVGTLLVGCSSIGSGKNNIKNIE----------------KQEFLLTNKYKD 49
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIA 112
I ++ GD + + V+ F ++ + +L +A+ + P +
Sbjct: 50 ANITIAFEGDKVYGFSGVNRYFGG-AKIDGDNIEVLN-VASTMMAGPEDRMQ 99
>gi|229100118|ref|ZP_04231021.1| hypothetical protein bcere0020_53200 [Bacillus cereus Rock3-29]
gi|229119408|ref|ZP_04248706.1| hypothetical protein bcere0017_56390 [Bacillus cereus Rock1-3]
gi|228664041|gb|EEL19584.1| hypothetical protein bcere0017_56390 [Bacillus cereus Rock1-3]
gi|228683282|gb|EEL37257.1| hypothetical protein bcere0020_53200 [Bacillus cereus Rock3-29]
Length = 213
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 31/100 (31%), Gaps = 3/100 (3%)
Query: 1 MIKE---LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M K+ + L+ + +++ CG + V + K+ S K E +
Sbjct: 1 MYKKLGTIALTGALAFSLAACGSNEKTSNGVETKEKEQPKQETKKDNSKEGKTESAKGNR 60
Query: 58 LQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQ 97
+ D + + +E L +++
Sbjct: 61 SNPIAFNETASIDDVILNTDGGEFKKFKAKVEVSILEVIR 100
>gi|229194681|ref|ZP_04321474.1| CamS sex pheromone cAM373 [Bacillus cereus m1293]
gi|228588784|gb|EEK46809.1| CamS sex pheromone cAM373 [Bacillus cereus m1293]
Length = 397
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Query: 2 IKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K++ L++ + +SGC + + +KV + S D+ +
Sbjct: 1 MKKIALAVLSLGLLVSGCSAGADKDEKVVEKSGKAKEQAIVPNYSISDEYYKTTIPFVGG 60
Query: 61 T--GIVVSRIGDMITCY 75
G+VV + + +
Sbjct: 61 NARGLVVQGVSNRLDID 77
>gi|119472685|ref|ZP_01614655.1| putative peptidase M13 family protein [Alteromonadales bacterium
TW-7]
gi|119444810|gb|EAW26112.1| putative peptidase M13 family protein [Alteromonadales bacterium
TW-7]
Length = 692
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRF 43
M K L + T I+GC +V + +T + NK
Sbjct: 1 MKKSLIAAALAATFITGCSEPQTTSSQVQTASTENTVVSNKAE 43
>gi|320577098|gb|ADW54058.1| outer membrane protein A [Sodalis glossinidius]
gi|320577102|gb|ADW54060.1| outer membrane protein A [Sodalis glossinidius]
Length = 207
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLIS 130
+ + L+ + L + + L+ + + +TD IGT + N +S
Sbjct: 152 SDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRIGTEQYNQKLS 207
>gi|320577074|gb|ADW54046.1| outer membrane protein A [Sodalis glossinidius]
Length = 238
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 77 PVHVSFVSEVFLEKKFLPMLQLIATILNKF--PSTVIAIQSHTDSIGTLKNNLLIS 130
+ + L+ + L + + L+ + + +TD IGT + N +S
Sbjct: 183 SDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRIGTEQYNQKLS 238
>gi|227509972|ref|ZP_03940021.1| pheromone lipoprotein CamS [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227190578|gb|EEI70645.1| pheromone lipoprotein CamS [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 385
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 34/106 (32%), Gaps = 13/106 (12%)
Query: 1 MIKELGLSMFIMT---TISGCGLA---SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEF 54
++K++ L + ++ +S CG S + K+ G ++
Sbjct: 5 ILKKIFLGISVILTGILLSACGSVDNLSNDTNSSGSSKAKTQLTGQTNTGYYQGVIKNGR 64
Query: 55 QMQLQDTGIVVSRIGDMITCYIPVHVS-------FVSEVFLEKKFL 93
+ G+ V + + + F ++ ++ ++
Sbjct: 65 YQTSKSRGVSVQQESNQFNIKGFENGLLNISKKQFSTKKYIFQEGQ 110
>gi|218703717|ref|YP_002411236.1| hypothetical protein ECUMN_0473 [Escherichia coli UMN026]
gi|293403554|ref|ZP_06647645.1| hypothetical protein ECGG_04270 [Escherichia coli FVEC1412]
gi|298379166|ref|ZP_06989047.1| lipoprotein yajG [Escherichia coli FVEC1302]
gi|300900503|ref|ZP_07118670.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|301022574|ref|ZP_07186446.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|331661813|ref|ZP_08362736.1| YajG [Escherichia coli TA143]
gi|218430814|emb|CAR11688.1| putative lipoprotein [Escherichia coli UMN026]
gi|284920244|emb|CBG33303.1| putative lipoprotein [Escherichia coli 042]
gi|291429407|gb|EFF02427.1| hypothetical protein ECGG_04270 [Escherichia coli FVEC1412]
gi|298280279|gb|EFI21783.1| lipoprotein yajG [Escherichia coli FVEC1302]
gi|300355984|gb|EFJ71854.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300397455|gb|EFJ80993.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|331060235|gb|EGI32199.1| YajG [Escherichia coli TA143]
Length = 192
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 1 MFKKILFPLVALFMLAGCAKPPTTIEVSPTMTLPQQDPSLMGVTVSINGADQRTDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQIVTLTASRDLRF 78
>gi|196038444|ref|ZP_03105753.1| putative lipoprotein [Bacillus cereus NVH0597-99]
gi|196030852|gb|EDX69450.1| putative lipoprotein [Bacillus cereus NVH0597-99]
Length = 303
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 48/169 (28%), Gaps = 21/169 (12%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K + + + + +SGCG + + G +A+ E Q + +
Sbjct: 6 KGILVGVLCVAVVSGCGTKVSD------------VALVSDIGGHTVEAKAEVQDSI--SL 51
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ ++ + F E KF + +A+ + K +
Sbjct: 52 VDGRTGTEVKKLDLSSLGYFEDEA----KFKKSVTKVASEVGKSVDKKMVPSRVAPDGSW 107
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +++ L S+ + + K P T G
Sbjct: 108 QEGKPSYELMEQELVDKLLNVGMWDSSYQLPIV---EKKPTATLSDAQG 153
>gi|163795889|ref|ZP_02189853.1| 17 kDa surface antigen precursor [alpha proteobacterium BAL199]
gi|159178922|gb|EDP63458.1| 17 kDa surface antigen precursor [alpha proteobacterium BAL199]
Length = 155
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 21/63 (33%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+++L + + +++ C ++ L + +FG K L
Sbjct: 1 MMQKLAVVTALAVSLAACSGTGPKQTGGALLGGVGGAVAGAQFGQGTGKLAAVAAGTLLG 60
Query: 61 TGI 63
I
Sbjct: 61 ALI 63
>gi|38703867|ref|NP_308515.2| hypothetical protein ECs0488 [Escherichia coli O157:H7 str.
Sakai]
gi|161367638|ref|NP_286176.2| hypothetical protein Z0537 [Escherichia coli O157:H7 EDL933]
gi|168768386|ref|ZP_02793393.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4486]
gi|168783301|ref|ZP_02808308.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4076]
gi|168786282|ref|ZP_02811289.1| putative lipoprotein [Escherichia coli O157:H7 str. EC869]
gi|208814939|ref|ZP_03256118.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4045]
gi|209399405|ref|YP_002269080.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4115]
gi|254791618|ref|YP_003076455.1| hypothetical protein ECSP_0502 [Escherichia coli O157:H7 str.
TW14359]
gi|261223915|ref|ZP_05938196.1| predicted lipoprotein [Escherichia coli O157:H7 str. FRIK2000]
gi|261256371|ref|ZP_05948904.1| predicted lipoprotein [Escherichia coli O157:H7 str. FRIK966]
gi|291281341|ref|YP_003498159.1| hypothetical protein G2583_0546 [Escherichia coli O55:H7 str.
CB9615]
gi|188999338|gb|EDU68324.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4076]
gi|189362363|gb|EDU80782.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4486]
gi|189373485|gb|EDU91901.1| putative lipoprotein [Escherichia coli O157:H7 str. EC869]
gi|208731587|gb|EDZ80275.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4045]
gi|209160805|gb|ACI38238.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4115]
gi|254591018|gb|ACT70379.1| predicted lipoprotein [Escherichia coli O157:H7 str. TW14359]
gi|290761214|gb|ADD55175.1| hypothetical protein G2583_0546 [Escherichia coli O55:H7 str.
CB9615]
gi|320192848|gb|EFW67488.1| Hypothetical lipoprotein YajG precursor [Escherichia coli O157:H7
str. EC1212]
gi|320638428|gb|EFX08142.1| hypothetical protein ECO5101_18115 [Escherichia coli O157:H7 str.
G5101]
gi|320643808|gb|EFX12931.1| hypothetical protein ECO9389_22476 [Escherichia coli O157:H- str.
493-89]
gi|320649159|gb|EFX17737.1| hypothetical protein ECO2687_23523 [Escherichia coli O157:H- str.
H 2687]
gi|320656052|gb|EFX23968.1| hypothetical protein ECO7815_11288 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661202|gb|EFX28633.1| hypothetical protein ECO5905_16263 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320665178|gb|EFX32271.1| hypothetical protein ECOSU61_23000 [Escherichia coli O157:H7 str.
LSU-61]
gi|326341196|gb|EGD64988.1| Hypothetical lipoprotein YajG precursor [Escherichia coli O157:H7
str. 1044]
gi|326346029|gb|EGD69768.1| Hypothetical lipoprotein YajG precursor [Escherichia coli O157:H7
str. 1125]
Length = 192
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 1 MFKKILFPLVALFMLAGCARPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQIVTLTASRDLRF 78
>gi|42779417|ref|NP_976664.1| putative lipoprotein [Bacillus cereus ATCC 10987]
gi|42735333|gb|AAS39272.1| lipoprotein, putative [Bacillus cereus ATCC 10987]
Length = 397
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 38/118 (32%), Gaps = 10/118 (8%)
Query: 2 IKELGLSMF-IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K++ L++ + +SGC + + +KV + S D+
Sbjct: 1 MKKIALAVLSLGLLVSGCSAGADKDEKVVEKSGKAKEQAIVPNYSISDEYYKTTIPFEGG 60
Query: 61 T--GIVVSRIGDMITCYIPVHVS-------FVSEVFLEKKFLPMLQLIATILNKFPST 109
G+VV + + + F ++ + K + +L K T
Sbjct: 61 NARGLVVQGVSNRLDIDEFETGLMRIAKESFSTKDNVLKGGKALDTQHIQMLVKRKRT 118
>gi|66047400|ref|YP_237241.1| hypothetical protein Psyr_4173 [Pseudomonas syringae pv. syringae
B728a]
gi|63258107|gb|AAY39203.1| Protein of unknown function DUF748 [Pseudomonas syringae pv.
syringae B728a]
Length = 1009
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 75 YIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ L + L ++ L + P + I+
Sbjct: 822 DLGSVSFAPGTSDLSAEAQNALDKLSVALKERPDLKLEIEG 862
>gi|16802560|ref|NP_464045.1| hypothetical protein lmo0517 [Listeria monocytogenes EGD-e]
gi|47094743|ref|ZP_00232358.1| phosphoglycerate mutase family protein [Listeria monocytogenes
str. 1/2a F6854]
gi|224500388|ref|ZP_03668737.1| hypothetical protein LmonF1_12259 [Listeria monocytogenes Finland
1988]
gi|224502182|ref|ZP_03670489.1| hypothetical protein LmonFR_06627 [Listeria monocytogenes FSL
R2-561]
gi|254829390|ref|ZP_05234077.1| phosphoglycerate mutase [Listeria monocytogenes FSL N3-165]
gi|254900257|ref|ZP_05260181.1| hypothetical protein LmonJ_10600 [Listeria monocytogenes J0161]
gi|254911189|ref|ZP_05261201.1| phosphoglycerate mutase family protein [Listeria monocytogenes
J2818]
gi|254935517|ref|ZP_05267214.1| phosphoglycerate mutase [Listeria monocytogenes F6900]
gi|284800792|ref|YP_003412657.1| hypothetical protein LM5578_0540 [Listeria monocytogenes 08-5578]
gi|284993978|ref|YP_003415746.1| hypothetical protein LM5923_0539 [Listeria monocytogenes 08-5923]
gi|16409893|emb|CAC98596.1| lmo0517 [Listeria monocytogenes EGD-e]
gi|47016883|gb|EAL07801.1| phosphoglycerate mutase family protein [Listeria monocytogenes
str. 1/2a F6854]
gi|258601804|gb|EEW15129.1| phosphoglycerate mutase [Listeria monocytogenes FSL N3-165]
gi|258608096|gb|EEW20704.1| phosphoglycerate mutase [Listeria monocytogenes F6900]
gi|284056354|gb|ADB67295.1| hypothetical protein LM5578_0540 [Listeria monocytogenes 08-5578]
gi|284059445|gb|ADB70384.1| hypothetical protein LM5923_0539 [Listeria monocytogenes 08-5923]
gi|293589119|gb|EFF97453.1| phosphoglycerate mutase family protein [Listeria monocytogenes
J2818]
Length = 271
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 9/95 (9%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV------NKRFGSSLDKAE 51
M K +L +++ + I+GCG ++ KK D + K ++ D+ +
Sbjct: 1 MKKNIFKLLMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFYVVRHGKTMLNTTDRVQ 60
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
L G V + + ++ S+
Sbjct: 61 GWSDAVLTPAGEEVVKSAGKGLKDVDFSAAYSSDS 95
>gi|237713332|ref|ZP_04543813.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262406707|ref|ZP_06083256.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|229446571|gb|EEO52362.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262355410|gb|EEZ04501.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
Length = 206
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 23/153 (15%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + L++ + ++GC KV K +D DK + +
Sbjct: 1 MKTILLAVGTLCLMAGCSS------KVASSKGIVSDATMNTVTIVTDKNDTLSFSTIDAN 54
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
V + + + V + + +P A+ L ++P + I + D G
Sbjct: 55 KDEV----NGLLLNDTLEVFYTGKYTP---GMP-----ASKLVQYPQSPI-VGGDRDEHG 101
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+ + ++ I+ R SV
Sbjct: 102 C----IGSAGYVWCEVQKDCIRLFEKGIRTESV 130
>gi|30263481|ref|NP_845858.1| putative lipoprotein [Bacillus anthracis str. Ames]
gi|47778178|ref|YP_020223.2| putative lipoprotein [Bacillus anthracis str. 'Ames Ancestor']
gi|49186332|ref|YP_029584.1| putative lipoprotein [Bacillus anthracis str. Sterne]
gi|49479284|ref|YP_037613.1| lipoprotein [Bacillus thuringiensis serovar konkukian str. 97-27]
gi|118478784|ref|YP_895935.1| lipoprotein [Bacillus thuringiensis str. Al Hakam]
gi|165872348|ref|ZP_02216984.1| putative lipoprotein [Bacillus anthracis str. A0488]
gi|167632122|ref|ZP_02390449.1| putative lipoprotein [Bacillus anthracis str. A0442]
gi|167637150|ref|ZP_02395430.1| putative lipoprotein [Bacillus anthracis str. A0193]
gi|170689073|ref|ZP_02880272.1| putative lipoprotein [Bacillus anthracis str. A0465]
gi|170708544|ref|ZP_02898985.1| putative lipoprotein [Bacillus anthracis str. A0389]
gi|177654606|ref|ZP_02936430.1| putative lipoprotein [Bacillus anthracis str. A0174]
gi|190564707|ref|ZP_03017628.1| putative lipoprotein [Bacillus anthracis Tsiankovskii-I]
gi|196035544|ref|ZP_03102948.1| putative lipoprotein [Bacillus cereus W]
gi|218904658|ref|YP_002452492.1| putative lipoprotein [Bacillus cereus AH820]
gi|225865496|ref|YP_002750874.1| putative lipoprotein [Bacillus cereus 03BB102]
gi|227813640|ref|YP_002813649.1| putative lipoprotein [Bacillus anthracis str. CDC 684]
gi|228934807|ref|ZP_04097638.1| VanW [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228947148|ref|ZP_04109442.1| VanW [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|229092495|ref|ZP_04223652.1| VanW [Bacillus cereus Rock3-42]
gi|229123049|ref|ZP_04252256.1| VanW [Bacillus cereus 95/8201]
gi|229600907|ref|YP_002867727.1| putative lipoprotein [Bacillus anthracis str. A0248]
gi|254686098|ref|ZP_05149957.1| putative lipoprotein [Bacillus anthracis str. CNEVA-9066]
gi|254738571|ref|ZP_05196274.1| putative lipoprotein [Bacillus anthracis str. Western North America
USA6153]
gi|254744870|ref|ZP_05202548.1| putative lipoprotein [Bacillus anthracis str. Kruger B]
gi|254752889|ref|ZP_05204925.1| putative lipoprotein [Bacillus anthracis str. Vollum]
gi|254759161|ref|ZP_05211187.1| putative lipoprotein [Bacillus anthracis str. Australia 94]
gi|30258116|gb|AAP27344.1| putative lipoprotein [Bacillus anthracis str. Ames]
gi|47551883|gb|AAT32698.2| putative lipoprotein [Bacillus anthracis str. 'Ames Ancestor']
gi|49180259|gb|AAT55635.1| lipoprotein, putative [Bacillus anthracis str. Sterne]
gi|49330840|gb|AAT61486.1| possible lipoprotein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|118418009|gb|ABK86428.1| possible lipoprotein [Bacillus thuringiensis str. Al Hakam]
gi|164711901|gb|EDR17442.1| putative lipoprotein [Bacillus anthracis str. A0488]
gi|167514657|gb|EDR90023.1| putative lipoprotein [Bacillus anthracis str. A0193]
gi|167532420|gb|EDR95056.1| putative lipoprotein [Bacillus anthracis str. A0442]
gi|170126546|gb|EDS95432.1| putative lipoprotein [Bacillus anthracis str. A0389]
gi|170666940|gb|EDT17704.1| putative lipoprotein [Bacillus anthracis str. A0465]
gi|172080571|gb|EDT65655.1| putative lipoprotein [Bacillus anthracis str. A0174]
gi|190564024|gb|EDV17988.1| putative lipoprotein [Bacillus anthracis Tsiankovskii-I]
gi|195991845|gb|EDX55809.1| putative lipoprotein [Bacillus cereus W]
gi|218537002|gb|ACK89400.1| putative lipoprotein [Bacillus cereus AH820]
gi|225787289|gb|ACO27506.1| putative lipoprotein [Bacillus cereus 03BB102]
gi|227002513|gb|ACP12256.1| putative lipoprotein [Bacillus anthracis str. CDC 684]
gi|228660343|gb|EEL15976.1| VanW [Bacillus cereus 95/8201]
gi|228690900|gb|EEL44674.1| VanW [Bacillus cereus Rock3-42]
gi|228812395|gb|EEM58722.1| VanW [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228824707|gb|EEM70508.1| VanW [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1]
gi|229265315|gb|ACQ46952.1| putative lipoprotein [Bacillus anthracis str. A0248]
Length = 303
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 48/169 (28%), Gaps = 21/169 (12%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K + + + + +SGCG + + G +A+ E Q + +
Sbjct: 6 KGILVGVLCVAVVSGCGTKVSD------------VALVSDIGGHTVEAKAEVQDSI--SL 51
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ ++ + F E KF + +A+ + K +
Sbjct: 52 VDGRTGTEVKKLDLSSLGYFEDEA----KFKKSVTKVASEVGKSVDKKMVPSRVAPDGSW 107
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +++ L S+ + + K P T G
Sbjct: 108 QEGKPSYELMEKELVDKLLNVGMWDSSYQLPIV---EKKPTATLSDAQG 153
>gi|172058452|ref|YP_001814912.1| extracellular solute-binding protein [Exiguobacterium sibiricum
255-15]
gi|171990973|gb|ACB61895.1| extracellular solute-binding protein family 5 [Exiguobacterium
sibiricum 255-15]
Length = 504
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 6/27 (22%), Positives = 10/27 (37%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKK 27
M K L ++ ++GC E
Sbjct: 1 MKKTLIAAVSTAFLLAGCSTTDTETAT 27
>gi|318606581|emb|CBY28079.1| putative lipoprotein [Yersinia enterocolitica subsp. palearctica
Y11]
Length = 56
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Query: 1 MIKELGLS--MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS 46
M+K++ L+ + +SGC S +V S T R
Sbjct: 4 MMKKIFLATTLITTVLLSGCATESSRSLEVAKVASYGTQYNGPRSPQY 51
>gi|304387999|ref|ZP_07370171.1| competence lipoprotein ComL [Neisseria meningitidis ATCC 13091]
gi|304337998|gb|EFM04136.1| competence lipoprotein ComL [Neisseria meningitidis ATCC 13091]
Length = 267
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 11/113 (9%), Positives = 35/113 (30%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L++ + +S C K + + + + L+ + ++L +
Sbjct: 1 MKKILLTVSLGLALSACATQGTVDKDAQITQDWSVEKLYAEAQDELNSSNYTRAVKLYEI 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + K L ++ + + P+ A+
Sbjct: 61 LESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALY 113
>gi|317056076|ref|YP_004104543.1| transglutaminase domain-containing protein [Ruminococcus albus 7]
gi|315448345|gb|ADU21909.1| transglutaminase domain-containing protein [Ruminococcus albus 7]
Length = 302
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ L ++GCG E K+ + +S D + + DT
Sbjct: 1 MKKAMLITIFAVLLTGCGSTGTENA-DAETKAVSQVTMTSHVTTSSDSEIETVPAETTDT 59
Query: 62 GIV 64
I
Sbjct: 60 TIK 62
>gi|303251610|ref|ZP_07337784.1| hypothetical protein APP6_0813 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302649608|gb|EFL79790.1| hypothetical protein APP6_0813 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 256
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 20/59 (33%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K+L L + ++ CG S SLD D+ + Q++
Sbjct: 1 MKKLLLVSALGLVLTACGSGGGGSSSANTTNSVKPTPAPVVAPKSLDGVRDDLKEQVKA 59
>gi|228916146|ref|ZP_04079716.1| VanW [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|300117659|ref|ZP_07055441.1| putative lipoprotein [Bacillus cereus SJ1]
gi|228843344|gb|EEM88422.1| VanW [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|298724992|gb|EFI65652.1| putative lipoprotein [Bacillus cereus SJ1]
Length = 303
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 48/169 (28%), Gaps = 21/169 (12%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K + + + + +SGCG + + G +A+ E Q + +
Sbjct: 6 KGILVGVLCVAVVSGCGTKVSD------------VALVSDIGGHTVEAKAEVQDSI--SL 51
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ ++ + F E KF + +A+ + K +
Sbjct: 52 VDGRTGTEVKKLDLSSLGYFEDEA----KFKKSVTKVASEVGKSVDKKMVPSRVAPDGSW 107
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +++ L S+ + + K P T G
Sbjct: 108 QEGKPSYELMEKELVDKLLNVGMWDSSYQLPIV---EKKPTATLSDAQG 153
>gi|34495888|ref|NP_900103.1| outer membrane efflux protein [Chromobacterium violaceum ATCC
12472]
gi|34101743|gb|AAQ58111.1| outer membrane efflux protein [Chromobacterium violaceum ATCC
12472]
Length = 466
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASR-EKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K + + + +S C + + KV L ++ + +D QL
Sbjct: 1 MLKRALIPVAVALAVSACAVGPDYSRPKVELPETQAGARAPAVDAGWWKRFDDPVLNQLI 60
Query: 60 DTGIV 64
+ +
Sbjct: 61 EEAVK 65
>gi|121634500|ref|YP_974745.1| competence lipoprotein [Neisseria meningitidis FAM18]
gi|218767825|ref|YP_002342337.1| competence lipoprotein [Neisseria meningitidis Z2491]
gi|254804586|ref|YP_003082807.1| DNA uptake lipoprotein [Neisseria meningitidis alpha14]
gi|18203141|sp|Q9JVB7|COML_NEIMA RecName: Full=Competence lipoprotein ComL; Flags: Precursor
gi|120866206|emb|CAM09946.1| competence lipoprotein [Neisseria meningitidis FAM18]
gi|121051833|emb|CAM08139.1| competence lipoprotein [Neisseria meningitidis Z2491]
gi|254668129|emb|CBA04725.1| DNA uptake lipoprotein [Neisseria meningitidis alpha14]
gi|254670507|emb|CBA06261.1| competence lipoprotein ComL [Neisseria meningitidis alpha153]
gi|261392925|emb|CAX50510.1| competence lipoprotein ComL [Neisseria meningitidis 8013]
gi|308388891|gb|ADO31211.1| competence lipoprotein [Neisseria meningitidis alpha710]
gi|319410075|emb|CBY90409.1| competence lipoprotein ComL [Neisseria meningitidis WUE 2594]
gi|325131844|gb|EGC54544.1| competence lipoprotein comL [Neisseria meningitidis M6190]
gi|325136075|gb|EGC58685.1| competence lipoprotein comL [Neisseria meningitidis M0579]
gi|325137894|gb|EGC60469.1| competence lipoprotein comL [Neisseria meningitidis ES14902]
gi|325139919|gb|EGC62449.1| competence lipoprotein comL [Neisseria meningitidis CU385]
gi|325141925|gb|EGC64365.1| competence lipoprotein comL [Neisseria meningitidis 961-5945]
gi|325197922|gb|ADY93378.1| competence lipoprotein comL [Neisseria meningitidis G2136]
gi|325202502|gb|ADY97956.1| competence lipoprotein comL [Neisseria meningitidis M01-240149]
gi|325207747|gb|ADZ03199.1| competence lipoprotein comL [Neisseria meningitidis NZ-05/33]
Length = 267
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 11/113 (9%), Positives = 35/113 (30%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L++ + +S C K + + + + L+ + ++L +
Sbjct: 1 MKKILLTVSLGLALSACATQGTVDKDAQITQDWSVEKLYAEAQDELNSSNYTRAVKLYEI 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + K L ++ + + P+ A+
Sbjct: 61 LESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALY 113
>gi|86132751|ref|ZP_01051343.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
gi|85816705|gb|EAQ37891.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
Length = 374
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 37/125 (29%), Gaps = 4/125 (3%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
IK L LS T + C + + ++ SN++ + +S + + + +
Sbjct: 11 IKSLSLSALAATLLVACSASQQVYDDDGIYSSNESANATSQEETSSNGSNTQVYKNYFEK 70
Query: 62 GIV--VSRIGDMITCYIPVHVSFVSEVFL--EKKFLPMLQLIATILNKFPSTVIAIQSHT 117
G G+ S + + ++ + I +++
Sbjct: 71 GAQELGELEGEGAIFTDIEEYSSEDSNAIYVDGTDFESATGYGAWGDEVQDVQVTIYNNS 130
Query: 118 DSIGT 122
G
Sbjct: 131 PIWGW 135
>gi|325920600|ref|ZP_08182516.1| RND family efflux transporter, MFP subunit [Xanthomonas gardneri
ATCC 19865]
gi|325548918|gb|EGD19856.1| RND family efflux transporter, MFP subunit [Xanthomonas gardneri
ATCC 19865]
Length = 423
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 9/84 (10%)
Query: 2 IKELGLS-MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K ++ + + +SGCG S ++ H + + G +K
Sbjct: 1 MKRFLIAPLVLALLLSGCGGNSGNSEEAHDHATPGAEGEADAHGEEAEK--------GAH 52
Query: 61 TGIVVSRIGDMITCYIPVHVSFVS 84
G ++ + GD + I + +
Sbjct: 53 GGRLLEQDGDSVELAIAEDGTPPT 76
>gi|315639941|ref|ZP_07895072.1| oligopeptide ABC superfamily ATP binding cassette transporter,
binding protein [Enterococcus italicus DSM 15952]
gi|315484366|gb|EFU74831.1| oligopeptide ABC superfamily ATP binding cassette transporter,
binding protein [Enterococcus italicus DSM 15952]
Length = 551
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 11/80 (13%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREK--------KKVFLHKSNDTDIVNKRFGSSLDKA 50
M K L L++ T+S C + + K ++ S ++ G D
Sbjct: 8 MKKRLLGYLAI-AALTLSACSTTGKNETTTSTDSSSKQVINVSTSGELTTLDSGQYSDVN 66
Query: 51 EDEFQMQLQDTGIVVSRIGD 70
+ Q+ + + GD
Sbjct: 67 SSDMIGQVTEGLYRTDKNGD 86
>gi|295134570|ref|YP_003585246.1| hypothetical protein ZPR_2728 [Zunongwangia profunda SM-A87]
gi|294982585|gb|ADF53050.1| conserved hypothetical protein [Zunongwangia profunda SM-A87]
Length = 400
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 6/85 (7%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K L LS+ + +SG +A L + + V + L + L
Sbjct: 1 MMKNLTLSLSLFVALSGSAVAQS------LSSTASNERVTDQVLKELSRERALLSQNLDF 54
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSE 85
+ + + I + +
Sbjct: 55 RIKEIDSKINNLDESIKNSRNASDK 79
>gi|239993338|ref|ZP_04713862.1| putative lipoprotein [Alteromonas macleodii ATCC 27126]
Length = 141
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 44/137 (32%), Gaps = 7/137 (5%)
Query: 1 MIKELGL-SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL- 58
M L L ++ ++GCG A ++ + + D + G E E + +L
Sbjct: 1 MKNRLVLSAIASALLLAGCGDAETNIVELDPIEVPEDDHDHDHDGDHGSDYEIESEGRLV 60
Query: 59 ----QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFL-PMLQLIATILNKFPSTVIAI 113
+ V + D S V + ++ A L +F +
Sbjct: 61 VADAASNTLTVFDLDDNSVLDTFSATFDGSSVSASADYRFAVINSRANGLTEFLDGGLWR 120
Query: 114 QSHTDSIGTLKNNLLIS 130
+ H + + + +S
Sbjct: 121 EDHVEHLHDYEEAPSLS 137
>gi|229546105|ref|ZP_04434830.1| lipoprotein [Enterococcus faecalis TX1322]
gi|229550294|ref|ZP_04439019.1| lipoprotein [Enterococcus faecalis ATCC 29200]
gi|255973067|ref|ZP_05423653.1| predicted protein [Enterococcus faecalis T1]
gi|256852864|ref|ZP_05558234.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|257422873|ref|ZP_05599863.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|300860129|ref|ZP_07106217.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|229304557|gb|EEN70553.1| lipoprotein [Enterococcus faecalis ATCC 29200]
gi|229308801|gb|EEN74788.1| lipoprotein [Enterococcus faecalis TX1322]
gi|255964085|gb|EET96561.1| predicted protein [Enterococcus faecalis T1]
gi|256711323|gb|EEU26361.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|257164697|gb|EEU94657.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|300850947|gb|EFK78696.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|327534842|gb|AEA93676.1| putative lipoprotein [Enterococcus faecalis OG1RF]
Length = 134
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 1/84 (1%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K LGL M + +SGC + +++V + KS + D + + + +
Sbjct: 1 MSKCLGLLMIL-FVLSGCSGSRNSQQEVVIEKSANNDKARQFVDQKNPHLGTQLEAESYT 59
Query: 61 TGIVVSRIGDMITCYIPVHVSFVS 84
+ + + + +
Sbjct: 60 KQEAIEFLQNGLGIPTNDSAFHYT 83
>gi|229085777|ref|ZP_04218005.1| chromosome segregation protein [Bacillus cereus Rock3-44]
gi|228697576|gb|EEL50333.1| chromosome segregation protein [Bacillus cereus Rock3-44]
Length = 113
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 2 IKELGLSMFIMTTISGCGLASRE------KKKVFLHKSNDTDIVNKRFGSS---LDKAED 52
+K++ L++F M I GC A+++ L +++ T + ++K+ D
Sbjct: 1 MKKIFLTLFSMLLIVGCSSANKDLESFYHSTDKLLEEASLTSPDKGKVKKELGNMEKSVD 60
Query: 53 EFQMQLQDTGIV 64
+ + ++ D +
Sbjct: 61 KMKGEVSDKKVE 72
>gi|296140005|ref|YP_003647248.1| molybdenum ABC transporter periplasmic molybdate-binding protein
[Tsukamurella paurometabola DSM 20162]
gi|296028139|gb|ADG78909.1| molybdenum ABC transporter, periplasmic molybdate-binding protein
[Tsukamurella paurometabola DSM 20162]
Length = 255
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 9/81 (11%), Positives = 23/81 (28%)
Query: 4 ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGI 63
L ++ ++ ++S C + T ++ +K EF + + +
Sbjct: 5 RLTAAVLLIASVSACSTSGTGASPDPADGGTVTVYAAASLQATFEKLAKEFSARYPGSTV 64
Query: 64 VVSRIGDMITCYIPVHVSFVS 84
S G +
Sbjct: 65 KFSFGGSSGLLTQLTQGAPAD 85
>gi|218549898|ref|YP_002383689.1| hypothetical protein EFER_2583 [Escherichia fergusonii ATCC
35469]
gi|218357439|emb|CAQ90078.1| putative lipoprotein [Escherichia fergusonii ATCC 35469]
gi|324114661|gb|EGC08629.1| hypothetical protein ERIG_00655 [Escherichia fergusonii B253]
Length = 192
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + M ++GC + D S++ A+ L
Sbjct: 1 MLKKILFPLITMVMLAGCATPPTTIEVSPTMTLPQQDPSLMGVTVSINGADQRPDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQIVTLTASRDLRF 78
>gi|161869645|ref|YP_001598811.1| competence lipoprotein [Neisseria meningitidis 053442]
gi|161595198|gb|ABX72858.1| competence lipoprotein [Neisseria meningitidis 053442]
gi|325127791|gb|EGC50699.1| competence lipoprotein comL [Neisseria meningitidis N1568]
gi|325133783|gb|EGC56439.1| competence lipoprotein comL [Neisseria meningitidis M13399]
gi|325203790|gb|ADY99243.1| competence lipoprotein comL [Neisseria meningitidis M01-240355]
Length = 267
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 11/113 (9%), Positives = 35/113 (30%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K++ L++ + +S C K + + + + L+ + ++L +
Sbjct: 1 MKKILLTVSLGLALSACATQGTVDKDAQITQDWSVEKLYAEAQDELNSSNYTRAVKLYEI 60
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQ 114
+ + K L ++ + + P+ A+
Sbjct: 61 LESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALY 113
>gi|251791952|ref|YP_003006672.1| NlpB protein [Aggregatibacter aphrophilus NJ8700]
gi|247533339|gb|ACS96585.1| NlpB protein [Aggregatibacter aphrophilus NJ8700]
Length = 334
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 15/129 (11%), Positives = 37/129 (28%), Gaps = 15/129 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSND-------TDIVNKRFGSSLDKAEDEF 54
+K+ L+ ++ +S C ++ K++ T + + E +
Sbjct: 1 MKKWLLTAAMIAVLSACSTSNESKQQAGDTYQKSNAELPSFTPLASGGVNLPAQSPEYQL 60
Query: 55 QMQLQDTGIVVSRIGDMITCYI--PVHVSFVSEVFL---EKKFLPM--LQLIATILNKFP 107
+ V I I F E L + L+ + +L +
Sbjct: 61 PQVKINKSETVDIRPPSIPLAIISNSVTQFDGERALIAYTPDKQSVYNLRQVERLLKE-Q 119
Query: 108 STVIAIQSH 116
++ +
Sbjct: 120 DIGYTVEGN 128
>gi|195938500|ref|ZP_03083882.1| hypothetical protein EscherichcoliO157_19067 [Escherichia coli
O157:H7 str. EC4024]
Length = 192
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ + + ++GC + D S++ A+ L
Sbjct: 1 MFKKILFPLVALFMLAGCARPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALA- 59
Query: 61 TGIVVSRIGDMITCYIPVHVSF 82
V+R ++T + F
Sbjct: 60 ---KVTRDNQIVTLTASRDLRF 78
>gi|27381673|ref|NP_773202.1| hypothetical protein blr6562 [Bradyrhizobium japonicum USDA 110]
gi|27354842|dbj|BAC51827.1| blr6562 [Bradyrhizobium japonicum USDA 110]
Length = 389
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 53/181 (29%), Gaps = 17/181 (9%)
Query: 1 MI--KELGLS----MFIMTTISGCGLASREKKKVFLH-------KSNDTDIVNKRFGSSL 47
M+ K L + M ++G A + + +
Sbjct: 166 MMRAKGLTTAGLGIALGMALLAGAASAQTTPPTRDDIVGKLNHFEEAAEIDLPALKQQVM 225
Query: 48 DKAEDEFQMQLQD-TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKF 106
++A+ + ++ + + ++ + IA L
Sbjct: 226 ERAKARIKNDPGPVNRPPIAPDLAKLPAFNAQIQFDADTPIIQPASYQTVGRIADALVHA 285
Query: 107 P--STVIAIQSHTDSI-GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPI 163
I H +S T + N ++SQ RAD I+ L+ S + + G + +
Sbjct: 286 SLLPYTFLIVGHVESNAKTREANAILSQRRADAIRDVLVNTFKISTKRLHPIGLGEEQFL 345
Query: 164 D 164
D
Sbjct: 346 D 346
>gi|320527202|ref|ZP_08028388.1| FAD binding domain protein [Solobacterium moorei F0204]
gi|320132393|gb|EFW24937.1| FAD binding domain protein [Solobacterium moorei F0204]
Length = 620
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 11/100 (11%), Positives = 29/100 (29%), Gaps = 8/100 (8%)
Query: 1 MIKELGLS-MFIMTTISGCGLASREKKKVFLHKSNDTD------IVNKRFGSSLDKAEDE 53
M K L + + + ++GC K ++ + + E +
Sbjct: 1 MNKRLFAACLSVGMLLAGCSTKKSTTVKDGTYEETVDGRNGKVTVSTTISSGKITNVEVK 60
Query: 54 FQMQLQD-TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+ + G ++ + I +V V+ +
Sbjct: 61 DNEETPEIAGTAITELPKKIVEKNSPNVDGVTGATITSDA 100
>gi|299771859|ref|YP_003733885.1| hypothetical protein AOLE_18140 [Acinetobacter sp. DR1]
gi|298701947|gb|ADI92512.1| hypothetical protein AOLE_18140 [Acinetobacter sp. DR1]
Length = 361
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 1 MIKE-LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
M+K+ L +SM ++GC S + + V + + ++ SS + Q
Sbjct: 1 MMKKVLMMSMCSALLLAGCNKTSEQDQTVSKDQKSTEQKATQKQDSSCLQIMVAMHTINQ 60
Query: 60 DTGIV 64
++ I
Sbjct: 61 NSKIE 65
>gi|298483171|ref|ZP_07001351.1| conserved hypothetical protein [Bacteroides sp. D22]
gi|298270688|gb|EFI12269.1| conserved hypothetical protein [Bacteroides sp. D22]
Length = 206
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 23/153 (15%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K + L++ + ++GC KV K +D DK + +
Sbjct: 1 MKTILLAVGTLCLMAGCSS------KVASSKGIVSDATMNTVTIVTDKNDTLSFSTMDAN 54
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIG 121
V + + + V + + +P A+ L ++P + I + D G
Sbjct: 55 KDEV----NGLLLNDTLEVFYTGKYTP---GMP-----ASKLVQYPQSPI-VGGDRDGHG 101
Query: 122 TLKNNLLISQERADVIKSYLIQRGVSSNRFISV 154
+ + ++ I+ R SV
Sbjct: 102 C----IGSAGYVWCEVQKDCIRLFEKGIRTESV 130
>gi|228931677|ref|ZP_04094582.1| hypothetical protein bthur0009_1690 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228827970|gb|EEM73699.1| hypothetical protein bthur0009_1690 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 270
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 10/91 (10%), Positives = 27/91 (29%), Gaps = 2/91 (2%)
Query: 2 IKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K++ LS+ + + C S ++ K K + +K ++
Sbjct: 1 MKKVLLSIVSGAVLLLGACSAGSDKEVKALDAKKITVGVTGGPHEQIFEKVKEVAAKDGL 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ + V + V+ +
Sbjct: 61 EIDVKVFNDYVAPNVSLDEKSLDVNSYQTKS 91
>gi|223984874|ref|ZP_03634981.1| hypothetical protein HOLDEFILI_02280 [Holdemania filiformis DSM
12042]
gi|223963167|gb|EEF67572.1| hypothetical protein HOLDEFILI_02280 [Holdemania filiformis DSM
12042]
Length = 688
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 32/116 (27%), Gaps = 8/116 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ + ++ SGC + S++ + D+ + QL
Sbjct: 1 MKKWKCLLALLIMASGCTAQPQ------PTPSSEPAPDTAGLTQTADQLAEMLVSQLGAA 54
Query: 62 GIVVS-RIGDMITCYIPVHVSFVSEVF-LEKKFLPMLQLIATILNKFPSTVIAIQS 115
+ + GD I V L + ++ + + +
Sbjct: 55 SVQYALMDGDTILVSGQRGVFAKGSDQALSADDQYAIGSVSKMFTAAAVMKLQEEG 110
>gi|220921474|ref|YP_002496775.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219946080|gb|ACL56472.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
Length = 612
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 19/73 (26%)
Query: 49 KAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS 108
+ + + R L+ F P L +AT+ P
Sbjct: 460 EVSVRAKDEAPAFDAATCRTAFAERIEPRTVRFAPGSADLQADFYPTLDDLATLARTCPG 519
Query: 109 TVIAIQSHTDSIG 121
I + H D G
Sbjct: 520 ARIEVAGHDDPPG 532
>gi|209696249|ref|YP_002264179.1| putative lipoprotein [Aliivibrio salmonicida LFI1238]
gi|208010202|emb|CAQ80529.1| putative lipoprotein [Aliivibrio salmonicida LFI1238]
Length = 234
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 4/45 (8%), Positives = 15/45 (33%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS 46
+K + ++ + + GC +++++ I
Sbjct: 1 MKRILSTLLLSAFLFGCSSNPLDEQRIKPTVLTGGQIQGDATSYY 45
>gi|194367508|ref|YP_002030118.1| hypothetical protein Smal_3736 [Stenotrophomonas maltophilia
R551-3]
gi|194350312|gb|ACF53435.1| conserved hypothetical protein [Stenotrophomonas maltophilia
R551-3]
Length = 217
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 6/47 (12%), Positives = 17/47 (36%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD 48
+K L ++ ++ +++ CG ++ + S D
Sbjct: 1 MKHLPIAGLLLLSLTACGGQDKQGAAGSGSDTPAETAAATGPAQSTD 47
>gi|170728236|ref|YP_001762262.1| endothelin-converting protein 1 [Shewanella woodyi ATCC 51908]
gi|169813583|gb|ACA88167.1| Endothelin-converting enzyme 1 [Shewanella woodyi ATCC 51908]
Length = 690
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLA--SREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQM 56
M K L T ++ CG + + + ++ T FG L + +
Sbjct: 1 MKKSLIAIALASTFLAACGTSEVKNSDVEKAVTAASSTKAELGSFGVDLSARNEAVKP 58
>gi|294141457|ref|YP_003557435.1| hypothetical protein SVI_2686 [Shewanella violacea DSS12]
gi|293327926|dbj|BAJ02657.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 129
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ---L 58
+K++ L + + C + V + + I N F S + + + + Q L
Sbjct: 1 MKKIVLVLASALIFTACA---QHTAGVMGSSTGEVRIDNSSFASDVGVEQLKARQQGGLL 57
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLP 94
Q TG++VS++ + ++ LE + P
Sbjct: 58 QGTGMIVSKVSTDLRVQYKFTWYDINGSTLEDEASP 93
>gi|261868164|ref|YP_003256086.1| NlpB protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413496|gb|ACX82867.1| NlpB protein [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 334
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSND-------TDIVNKRFGSSLDKAEDEF 54
+K+ L++ I+T +S C + K++ T + + AE +
Sbjct: 1 MKKWLLTVAIVTALSACSTGNESKQQAGDTYQKSNSELPYFTPLASGGVNLPAQSAEYQL 60
Query: 55 QMQLQD--TGIVVSRIGDMITCYIPVHVSFVSEVFL---EKKFLPM--LQLIATILNKFP 107
G+ + + F E L + L + +L +
Sbjct: 61 PPVKISRTDGVDIRPPSLPLAIISNSVTQFDGERALIAYTPDKQSVYNLTQVERLLKE-Q 119
Query: 108 STVIAIQSH 116
++ +
Sbjct: 120 DISYTVEGN 128
>gi|254884423|ref|ZP_05257133.1| lipoprotein [Bacteroides sp. 4_3_47FAA]
gi|319642450|ref|ZP_07997101.1| lipoprotein [Bacteroides sp. 3_1_40A]
gi|254837216|gb|EET17525.1| lipoprotein [Bacteroides sp. 4_3_47FAA]
gi|317385906|gb|EFV66834.1| lipoprotein [Bacteroides sp. 3_1_40A]
Length = 142
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 6/35 (17%), Positives = 12/35 (34%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSND 35
M+K+L + + I+ C S+
Sbjct: 1 MMKKLFILACVCLLITSCNSNSKNTNDSATSTETT 35
>gi|218461676|ref|ZP_03501767.1| flagellar motor protein MotB [Rhizobium etli Kim 5]
Length = 75
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 117 TDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQ 176
G N +S +RA L++ G+ R V GFA + + N+
Sbjct: 9 RQYKGAQNENWRLSMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLP--AEPFNAANR 66
Query: 177 RIEIQI 182
RIEI +
Sbjct: 67 RIEILV 72
>gi|149921420|ref|ZP_01909873.1| hypothetical protein PPSIR1_26688 [Plesiocystis pacifica SIR-1]
gi|149817740|gb|EDM77205.1| hypothetical protein PPSIR1_26688 [Plesiocystis pacifica SIR-1]
Length = 180
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 55/155 (35%), Gaps = 7/155 (4%)
Query: 9 MFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTGIVVSRI 68
+ +++ ++G A V + D+ K + Q + +
Sbjct: 12 LAVLSLVAGLSQALACSTVVEVKPEFPIDVSAKPPAKPIADLPAVPQPPPPRVRLEGTTT 71
Query: 69 GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLKNNL 127
++ ++F + L + +++ +A L K P T + +++ + G+ + +
Sbjct: 72 -----VWVDEALTFTEDGVLSPEHADIIEALAKWLAKHPEVTTLRVEAQSIGSGSKRAHK 126
Query: 128 LISQERADVIKSYLIQRGVSSNRFISV-RGFAYKY 161
S A I L G+ + R +V G +
Sbjct: 127 KRSAGLAQQIVDQLTTEGIEAGRLEAVGAGRSEDE 161
>gi|332981775|ref|YP_004463216.1| family 5 extracellular solute-binding protein [Mahella
australiensis 50-1 BON]
gi|332699453|gb|AEE96394.1| extracellular solute-binding protein family 5 [Mahella
australiensis 50-1 BON]
Length = 669
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 22/57 (38%), Gaps = 8/57 (14%)
Query: 2 IKEL--------GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKA 50
+K+L +++ + T ++GCG ++ +K+ TD +
Sbjct: 1 MKKLRLFVIWLLAVALLLPTVLAGCGTSTEGEKQPAETGEQTTDQEEQVENKPEQTQ 57
>gi|332799016|ref|YP_004460515.1| hypothetical protein TepRe1_1060 [Tepidanaerobacter sp. Re1]
gi|332696751|gb|AEE91208.1| hypothetical protein TepRe1_1060 [Tepidanaerobacter sp. Re1]
Length = 162
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K L + ++ ++GC E + + + D+ + + ++
Sbjct: 1 MKKILIICFIVLLVLTGCSATKDESDNN--QNAIADKVGEENIEKKKDEQAEVKESEI 56
>gi|291558063|emb|CBL35180.1| Beta-xylosidase [Eubacterium siraeum V10Sc8a]
Length = 710
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Query: 1 MIKELG--LSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
M K++ + M +SGC + +S+ + + + DK ++E +
Sbjct: 6 MNKKITALICAAAMLLVSGCSEQNGSNDSSVQTESSADSVDSVSKAETSDKPDNETIIDS 65
Query: 59 QDTGIVVSRIGDMITCYIPV 78
+ GI++ + +
Sbjct: 66 LNNGIIIDEVSGNVYKNESN 85
>gi|255525672|ref|ZP_05392605.1| phosphate binding protein [Clostridium carboxidivorans P7]
gi|296185430|ref|ZP_06853840.1| putative thr operon leader peptide [Clostridium carboxidivorans P7]
gi|255510658|gb|EET86965.1| phosphate binding protein [Clostridium carboxidivorans P7]
gi|296050264|gb|EFG89688.1| putative thr operon leader peptide [Clostridium carboxidivorans P7]
Length = 296
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 35/121 (28%), Gaps = 10/121 (8%)
Query: 1 MIKE---LGLSMFIMTTI----SGCGLASREKKKVF--LHKSNDTDIVNKRFGSSLDKAE 51
M K+ + ++ +T + +GCG + + T + D+A
Sbjct: 1 MKKKSLKIIIAALAVTMVTGVFAGCGSKEQSSSGDTKKEVSGSITLAGSTALQPLADQAG 60
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYI-PVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+F + I V G + + + + + + A L
Sbjct: 61 KKFTEKNSKATINVQGGGSGTGIKLVAEGTADIGNSDITAEAAKLDAQKAKELVDHKVCA 120
Query: 111 I 111
I
Sbjct: 121 I 121
>gi|300362140|ref|ZP_07058317.1| conserved hypothetical protein [Lactobacillus gasseri JV-V03]
gi|300354759|gb|EFJ70630.1| conserved hypothetical protein [Lactobacillus gasseri JV-V03]
Length = 195
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 6/26 (23%), Positives = 12/26 (46%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKK 27
+K+L L +F ++ C S +
Sbjct: 1 MKKLVLVLFSTILLTACSNTSSNNTE 26
>gi|212639957|ref|YP_002316477.1| oligopeptide ABC transporter periplasmic protein [Anoxybacillus
flavithermus WK1]
gi|212561437|gb|ACJ34492.1| ABC-type oligopeptide transport system, periplasmic component
[Anoxybacillus flavithermus WK1]
Length = 563
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Query: 1 MIKEL----GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAE-DEFQ 55
M K+L L + ++ CG +K + ++ + LD +E
Sbjct: 15 MKKKLSAFFALLLVASMVLAACGGKKEDKTANEGEQPAQEQPAKEQVLNLLDSSEIPSLD 74
Query: 56 MQLQDTGIVVSRIGD 70
L + + +
Sbjct: 75 STLATDSVSFRVMNN 89
>gi|167770291|ref|ZP_02442344.1| hypothetical protein ANACOL_01634 [Anaerotruncus colihominis DSM
17241]
gi|167667613|gb|EDS11743.1| hypothetical protein ANACOL_01634 [Anaerotruncus colihominis DSM
17241]
Length = 377
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 15/55 (27%), Gaps = 5/55 (9%)
Query: 2 IKELG----LSMFIMTTISGCGLASREKKK-VFLHKSNDTDIVNKRFGSSLDKAE 51
+K+L ++ ++ CG E T G AE
Sbjct: 1 MKKLLSSVLAAILAAGMLTACGSKPAESTTSQAPAGDASTAQSAAPAGDEASAAE 55
>gi|169857640|ref|XP_001835468.1| hypothetical protein CC1G_05430 [Coprinopsis cinerea okayama7#130]
gi|116503541|gb|EAU86436.1| hypothetical protein CC1G_05430 [Coprinopsis cinerea okayama7#130]
Length = 229
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/175 (12%), Positives = 45/175 (25%), Gaps = 10/175 (5%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K L + + T++G A + G +
Sbjct: 4 KSLTSLVLLAFTLTGVAAAPAPTTPCAQVHIIAARASTEPPGPGIVGQLITQIQNQSSQT 63
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ + T S L+ L A N+ P+ I + ++
Sbjct: 64 VSTDSVDYPATLENYNESSSAGTAALKTH----LTNQA---NRCPNQKIVLIGYSQGAHI 116
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
+ + L ++ I +NR ++V F + G +R
Sbjct: 117 IGDTLAGGGGGLLGTRTPAID-SSIANRVVAVAKFGDPRHVAGKSYNEGTA--RR 168
>gi|119775459|ref|YP_928199.1| hypothetical protein Sama_2324 [Shewanella amazonensis SB2B]
gi|119767959|gb|ABM00530.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 151
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 12/124 (9%), Positives = 39/124 (31%), Gaps = 12/124 (9%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ---- 57
+K+ + + ++GC + + + + L + Q +
Sbjct: 1 MKKWIYTCLALVFLAGCASSDDRYVQWETEAPASFPKLTAIGYAPLATQPAKTQAEKVLM 60
Query: 58 -LQDTGIVVSRI------GDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTV 110
+Q + + R G I+ V+ + ++ +++ A ++ +P
Sbjct: 61 AMQASKLAAYRELAEQVYGQKISAGASVNDWAMGSDSIKASVSGVIRG-ARVVKAYPVGE 119
Query: 111 IAIQ 114
+
Sbjct: 120 HYVT 123
>gi|312892288|ref|ZP_07751784.1| hypothetical protein MucpaDRAFT_4375 [Mucilaginibacter paludis
DSM 18603]
gi|311295263|gb|EFQ72436.1| hypothetical protein MucpaDRAFT_4375 [Mucilaginibacter paludis
DSM 18603]
Length = 210
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+L + + ++GC +S K + + ++ + +K + +
Sbjct: 1 MKKLVNILAVALVLAGCSQSSTRSGKSADAPQLNQEQLDSV--ARYNKYKSTLNVVFGKV 58
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFLEKKF 92
+S V S + F
Sbjct: 59 TFGISPQEFKKLVGDKPVVVGNSSYSADPSF 89
>gi|317056051|ref|YP_004104518.1| GumN family protein [Ruminococcus albus 7]
gi|315448320|gb|ADU21884.1| GumN family protein [Ruminococcus albus 7]
Length = 368
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 8/90 (8%), Positives = 23/90 (25%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K++ ++ + C ++ + + S + A
Sbjct: 1 MEKKILIAALAIVMAFSCASCGKKDDDSSSKADTVSSAADTTVTSDEETAVTTADETAVT 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
T + G+ F+ ++
Sbjct: 61 TSDETAPAGENSFGSTADINEFIKTKEIDP 90
>gi|294141129|ref|YP_003557107.1| hypothetical protein SVI_2358 [Shewanella violacea DSS12]
gi|293327598|dbj|BAJ02329.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 254
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 35/111 (31%), Gaps = 17/111 (15%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M+K++ + +TT++GC + +K + + +SL K + + +Q
Sbjct: 1 MLKQIF-CIAAITTLAGCASTTTTEKHLQPIDAA-------ALETSLAKQQADLVAVIQT 52
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVI 111
+ + L L++ L P I
Sbjct: 53 DLVTAIDENTQAQAA---------SYKVLSTQLTALEIQIAQLKLEPKENI 94
>gi|238021800|ref|ZP_04602226.1| hypothetical protein GCWU000324_01703 [Kingella oralis ATCC 51147]
gi|237866414|gb|EEP67456.1| hypothetical protein GCWU000324_01703 [Kingella oralis ATCC 51147]
Length = 276
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 23/177 (12%), Positives = 59/177 (33%), Gaps = 26/177 (14%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
++K+ L + + ++GC + KK + + D+ +E + +L
Sbjct: 4 LMKKSLLFIALAVALTGCAFKDKAKKVKIDSDTIAAQNWSN------DQLYNEARSELNA 57
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI 120
+ I + + L+ + A N+ P+ +A+ S +
Sbjct: 58 KNYDRANKLYEILRARQAPGRYTEQSLLDAAY-------AHYKNEEPAKALALLSRFEHN 110
Query: 121 GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQR 177
++ + ++ L S R ++ + ++ + P Q N+R
Sbjct: 111 YPASIDMDYALYLRGLV---LFDEDQSFLRKLASQDWSDRDP----------QANRR 154
>gi|229525214|ref|ZP_04414619.1| protease insulinase family protein [Vibrio cholerae bv. albensis
VL426]
gi|229338795|gb|EEO03812.1| protease insulinase family protein [Vibrio cholerae bv. albensis
VL426]
Length = 952
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 5/23 (21%), Positives = 13/23 (56%)
Query: 1 MIKELGLSMFIMTTISGCGLASR 23
M++++ L F + ++GC +
Sbjct: 1 MMRKITLFGFSLLLLAGCSSSDS 23
>gi|227485927|ref|ZP_03916243.1| hypothetical protein HMPREF0072_1330 [Anaerococcus lactolyticus
ATCC 51172]
gi|227236160|gb|EEI86175.1| hypothetical protein HMPREF0072_1330 [Anaerococcus lactolyticus
ATCC 51172]
Length = 295
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 25/87 (28%), Gaps = 12/87 (13%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDT 61
+K+ + + +S CG D + S +++ + + ++ D
Sbjct: 1 MKKFLWILALALCLSACGN------------EVDKANDGAKGVSQVNEDKAKDDEKVSDD 48
Query: 62 GIVVSRIGDMITCYIPVHVSFVSEVFL 88
+ + F S L
Sbjct: 49 KKAKEAEDSSVQASLKEDDFFFSNHDL 75
>gi|218898624|ref|YP_002447035.1| putative lipoprotein [Bacillus cereus G9842]
gi|228905051|ref|ZP_04069090.1| VanW [Bacillus thuringiensis IBL 4222]
gi|228912175|ref|ZP_04075890.1| VanW [Bacillus thuringiensis IBL 200]
gi|228968889|ref|ZP_04129843.1| VanW [Bacillus thuringiensis serovar sotto str. T04001]
gi|218543010|gb|ACK95404.1| putative lipoprotein [Bacillus cereus G9842]
gi|228790812|gb|EEM38459.1| VanW [Bacillus thuringiensis serovar sotto str. T04001]
gi|228847512|gb|EEM92451.1| VanW [Bacillus thuringiensis IBL 200]
gi|228854596|gb|EEM99215.1| VanW [Bacillus thuringiensis IBL 4222]
Length = 303
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 19/169 (11%), Positives = 46/169 (27%), Gaps = 21/169 (12%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K + + + + +SGCG + + G +A+ E Q + +
Sbjct: 6 KGILVGVLCVAVVSGCGTKVSD------------VALVSDIGGHTVEAKAEVQDTI--SL 51
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ ++ + F E KF + + + K +
Sbjct: 52 VDGRTGTEVKKLDLSGLGYFEDEA----KFKKSVTKVVGEVGKSVDKKMVPSRIAPDGSW 107
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +++ L + + + K P+ T G
Sbjct: 108 QEGKPSYELMEKELVDKLLNVGMWDATYQLPIV---EKKPVATLSDAQG 153
>gi|152981001|ref|YP_001354628.1| drug efflux lipoprotein [Janthinobacterium sp. Marseille]
gi|151281078|gb|ABR89488.1| drug efflux lipoprotein [Janthinobacterium sp. Marseille]
Length = 481
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 5/44 (11%), Positives = 15/44 (34%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGS 45
+K + L++ +S C +A + + ++
Sbjct: 1 MKTITLALLAAGVLSACSMAPKYVRPDAPVAADYGVPSKADNNQ 44
>gi|326569870|gb|EGE19920.1| protein-disulfide isomerase-like protein [Moraxella catarrhalis
BC8]
Length = 272
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 24/88 (27%), Gaps = 9/88 (10%)
Query: 2 IKELGL-------SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLD-KAEDE 53
++++ + M +S C + K T + D
Sbjct: 1 MRQIFMHRLLPPTLMASFLLLSACSSGNSHAKDTSNASQPTTQTQTSAKSAQSDTTLVKT 60
Query: 54 FQMQLQDTGIVVSRIGDMITCYIPVHVS 81
Q L G+ ++ + + +P
Sbjct: 61 LQDNLTQAGVDITVT-NALPTTMPDIYW 87
>gi|326336577|ref|ZP_08202746.1| hypothetical protein HMPREF9071_2212 [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325691242|gb|EGD33212.1| hypothetical protein HMPREF9071_2212 [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 308
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 36/126 (28%), Gaps = 23/126 (18%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV------------------NKR 42
M K + + ++GC S+ K +
Sbjct: 1 MKKIILTLVLAGALLAGCNSNSKGKNPFDSISGQNQANEVIGFYNDALEFYKRNSSYTDD 60
Query: 43 FGSSLDKAEDEFQMQLQDT-GIVVSRIGDMITCYIPVHVS----FVSEVFLEKKFLPMLQ 97
+D+A++ Q + I R MIT ++ F + + +K L+
Sbjct: 61 VVDYVDEAQEFLQKKASGGVAIKPIRPMKMITVSAKDNLKVPDGFGDKKEIIEKAFEALK 120
Query: 98 LIATIL 103
+ +
Sbjct: 121 THSDKI 126
>gi|306820548|ref|ZP_07454181.1| ABC superfamily ATP binding cassette transporter, binding protein
[Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304551462|gb|EFM39420.1| ABC superfamily ATP binding cassette transporter, binding protein
[Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 393
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Query: 1 MIKELGL---SMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQ 57
M +L L + + ++S CG +++ K + + D+
Sbjct: 1 MKNKLALIFAATLVAFSLSACGGGDKQQADNNGQKQQNAATQQQGENDKKDEENKAKGSS 60
Query: 58 LQDTGIVVSRI 68
I V+
Sbjct: 61 DSAFDIEVTDD 71
>gi|228905962|ref|ZP_04069857.1| hypothetical protein bthur0013_1520 [Bacillus thuringiensis IBL
200]
gi|228853649|gb|EEM98411.1| hypothetical protein bthur0013_1520 [Bacillus thuringiensis IBL
200]
Length = 270
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 29/91 (31%), Gaps = 2/91 (2%)
Query: 2 IKELGLSMF--IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K++ LS+ + + C ++S ++ K K + +K ++
Sbjct: 1 MKKVLLSIISGAVLLLGACSVSSNKEVKALDEKKITVGVTGGPHEQIFEKVKEVAAKDGL 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSEVFLEK 90
+ I V + V+ +
Sbjct: 61 EIDIKVFNDYVAPNVSLDEKSLDVNSYQTKS 91
>gi|228928570|ref|ZP_04091607.1| VanW [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228831082|gb|EEM76682.1| VanW [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 303
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 48/169 (28%), Gaps = 21/169 (12%)
Query: 3 KELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQDTG 62
K + + + + +SGCG + + G +A+ E Q + +
Sbjct: 6 KGILVGVLCVAVVSGCGTKVSD------------VALVSDIGGHTVEAKAEVQDSI--SL 51
Query: 63 IVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGT 122
+ ++ + F E KF + +A+ + K +
Sbjct: 52 VDGRTGTEVKKLDLSSLGYFEDEA----KFKKSVTKVASEVGKSVDKKMVPSRVAPDGSW 107
Query: 123 LKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVG 171
+ +++ L S+ + + K P T G
Sbjct: 108 QEGKPSYELMEKELVDKLLNVGMWDSSYQLPIV---EKKPTATLSDAQG 153
>gi|229095053|ref|ZP_04226049.1| Ferrichrome-binding periplasmic protein [Bacillus cereus Rock3-29]
gi|229101155|ref|ZP_04231921.1| Ferrichrome-binding periplasmic protein [Bacillus cereus Rock3-28]
gi|229114007|ref|ZP_04243433.1| Ferrichrome-binding periplasmic protein [Bacillus cereus Rock1-3]
gi|228669466|gb|EEL24882.1| Ferrichrome-binding periplasmic protein [Bacillus cereus Rock1-3]
gi|228682283|gb|EEL36394.1| Ferrichrome-binding periplasmic protein [Bacillus cereus Rock3-28]
gi|228688383|gb|EEL42265.1| Ferrichrome-binding periplasmic protein [Bacillus cereus Rock3-29]
Length = 305
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 40/117 (34%), Gaps = 5/117 (4%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L +S+ + +S C S +KK ++T G A + + L
Sbjct: 1 MKKLFISLTVLFVLVMSACSNGSTDKKNDAKGSKSETITYQSENGKVEVPANPKRVVVLS 60
Query: 60 DTGIVVSRIG-DMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQ 114
V +G +++ + + L+ + + + P +I +
Sbjct: 61 SFAGNVMSLGVNVVGVDSWSKQNPRFDSKLKDVA-EVSDENVEKIAELNPDLIIGLS 116
>gi|227501011|ref|ZP_03931060.1| siderophore ABC superfamily ATP binding cassette transporter,
binding protein [Anaerococcus tetradius ATCC 35098]
gi|227216784|gb|EEI82182.1| siderophore ABC superfamily ATP binding cassette transporter,
binding protein [Anaerococcus tetradius ATCC 35098]
Length = 411
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 43/122 (35%), Gaps = 14/122 (11%)
Query: 1 MIKE-----LGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE-- 53
++K+ L L + +S CG +++ +K ++ + V + +D+
Sbjct: 4 IMKKFNLRNLSLIAILALMLSACGSNNQKSEKTDKEETKVEENVKDDSKKEASEKKDDKK 63
Query: 54 -----FQMQLQDTGIVVSRIGDMITCY-IPVHVSFVSEVFLEKK-FLPMLQLIATILNKF 106
+ + + + D + F+ ++L+K F + + L K
Sbjct: 64 TEGKIVIEDVLGRKVELDKPLDKVIIQGSGSGGPFMQMMYLDKDNFYKKIAAMDDGLRKN 123
Query: 107 PS 108
+
Sbjct: 124 RN 125
>gi|282932385|ref|ZP_06337816.1| cell surface hydrolase [Lactobacillus jensenii 208-1]
gi|297206417|ref|ZP_06923812.1| cell surface hydrolase [Lactobacillus jensenii JV-V16]
gi|281303499|gb|EFA95670.1| cell surface hydrolase [Lactobacillus jensenii 208-1]
gi|297149543|gb|EFH29841.1| cell surface hydrolase [Lactobacillus jensenii JV-V16]
Length = 287
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 16/120 (13%), Positives = 45/120 (37%), Gaps = 16/120 (13%)
Query: 1 MIKELGLS---MFIMTTISGCGLASREKKKVFLHKSNDTDIVNK--------RFGSSLDK 49
M+K++ + T++ C + +K + + +K +GSS++
Sbjct: 1 MMKKILKIFYCIVACLTLTACSSTKKAEKSASSVPATNAKQADKRVVTFFFHGWGSSIN- 59
Query: 50 AEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPST 109
AE + + G+ D++T + + + + K+ + + + N+ +
Sbjct: 60 AEKQMVNAAKKAGVT----KDVLTVIVDSNGVAHIQNAISKQAKNPIVKVGYLDNENTNY 115
>gi|30260521|ref|NP_842898.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. Ames]
gi|47525618|ref|YP_016967.1| iron compound ABC transporter iron compound-binding protein
[Bacillus anthracis str. 'Ames Ancestor']
gi|49183364|ref|YP_026616.1| iron compound ABC transporter iron compound-binding protein
[Bacillus anthracis str. Sterne]
gi|52144898|ref|YP_081932.1| ferrichrome-binding periplasmic protein [Bacillus cereus E33L]
gi|118476099|ref|YP_893250.1| ferrichrome-binding, periplasmic protein [Bacillus thuringiensis
str. Al Hakam]
gi|165871379|ref|ZP_02216027.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. A0488]
gi|167634216|ref|ZP_02392538.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. A0442]
gi|170688365|ref|ZP_02879574.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. A0465]
gi|170708913|ref|ZP_02899346.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. A0389]
gi|190567483|ref|ZP_03020396.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis Tsiankovskii-I]
gi|196034785|ref|ZP_03102193.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus W]
gi|196040176|ref|ZP_03107478.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus NVH0597-99]
gi|218901541|ref|YP_002449375.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus AH820]
gi|227813016|ref|YP_002813025.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. CDC 684]
gi|228913086|ref|ZP_04076725.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228925594|ref|ZP_04088683.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228931840|ref|ZP_04094736.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228944146|ref|ZP_04106525.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229089467|ref|ZP_04220737.1| Ferrichrome-binding periplasmic protein [Bacillus cereus Rock3-42]
gi|229119997|ref|ZP_04249252.1| Ferrichrome-binding periplasmic protein [Bacillus cereus 95/8201]
gi|229154102|ref|ZP_04282227.1| Ferrichrome-binding periplasmic protein [Bacillus cereus ATCC 4342]
gi|229600743|ref|YP_002864966.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. A0248]
gi|254686735|ref|ZP_05150593.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. CNEVA-9066]
gi|254724811|ref|ZP_05186594.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. A1055]
gi|254740765|ref|ZP_05198455.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. Kruger B]
gi|254756114|ref|ZP_05208143.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. Vollum]
gi|254761932|ref|ZP_05213781.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. Australia 94]
gi|300118970|ref|ZP_07056681.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus SJ1]
gi|30253889|gb|AAP24384.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. Ames]
gi|47500766|gb|AAT29442.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. 'Ames Ancestor']
gi|49177291|gb|AAT52667.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. Sterne]
gi|51978367|gb|AAU19917.1| ferrichrome-binding periplasmic protein [Bacillus cereus E33L]
gi|118415324|gb|ABK83743.1| ferrichrome-binding, periplasmic protein [Bacillus thuringiensis
str. Al Hakam]
gi|164712863|gb|EDR18392.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. A0488]
gi|167530530|gb|EDR93245.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. A0442]
gi|170126146|gb|EDS95040.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. A0389]
gi|170667697|gb|EDT18451.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. A0465]
gi|190561270|gb|EDV15242.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis Tsiankovskii-I]
gi|195992828|gb|EDX56788.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus W]
gi|196029031|gb|EDX67636.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus NVH0597-99]
gi|218536190|gb|ACK88588.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus AH820]
gi|227006872|gb|ACP16615.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. CDC 684]
gi|228629382|gb|EEK86084.1| Ferrichrome-binding periplasmic protein [Bacillus cereus ATCC 4342]
gi|228663463|gb|EEL19048.1| Ferrichrome-binding periplasmic protein [Bacillus cereus 95/8201]
gi|228693853|gb|EEL47546.1| Ferrichrome-binding periplasmic protein [Bacillus cereus Rock3-42]
gi|228815535|gb|EEM61777.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228827820|gb|EEM73558.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228834072|gb|EEM79620.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228846491|gb|EEM91504.1| Ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|229265151|gb|ACQ46788.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. A0248]
gi|298723586|gb|EFI64317.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus SJ1]
Length = 305
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 38/117 (32%), Gaps = 5/117 (4%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L +S+ + +S C S +KK ++T G A + + L
Sbjct: 1 MKKLFISLTVLFVLVMSACSNGSTDKKNDAKGSKSETITYQSENGKVEVPANPKRVVVLS 60
Query: 60 DTGIVVSRIGDMIT-CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQ 114
V +G + + + L+ + + + P +I +
Sbjct: 61 SFAGNVMSLGVNLVGVDSWSKQNPRFDSKLKDVA-EVSDENVEKIAELNPDLIIGLS 116
>gi|85711856|ref|ZP_01042911.1| Predicted O-methyltransferase [Idiomarina baltica OS145]
gi|85694253|gb|EAQ32196.1| Predicted O-methyltransferase [Idiomarina baltica OS145]
Length = 283
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 19/53 (35%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDE 53
M +L LS+ T+S CG AS E + R + + E
Sbjct: 1 MKTKLMLSIATALTLSACGQASNEGSVGSSMTLEKAVQDDSRTERYVKRDEAR 53
>gi|316934251|ref|YP_004109233.1| hypothetical protein Rpdx1_2917 [Rhodopseudomonas palustris DX-1]
gi|315601965|gb|ADU44500.1| hypothetical protein Rpdx1_2917 [Rhodopseudomonas palustris DX-1]
Length = 145
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 7/45 (15%), Positives = 17/45 (37%)
Query: 2 IKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSS 46
++ LG ++ +SGC +R + + + G+
Sbjct: 1 MRSLGGAVLAALLLSGCASVTRGTTENISIATTPSGAKADVSGTE 45
>gi|317127811|ref|YP_004094093.1| hypothetical protein Bcell_1092 [Bacillus cellulosilyticus DSM
2522]
gi|315472759|gb|ADU29362.1| hypothetical protein Bcell_1092 [Bacillus cellulosilyticus DSM
2522]
Length = 166
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
++++ +++ + ISGC +++ +L + + GS +++ +
Sbjct: 1 MRKVLIALVTISLLFISGCSQTNKDVAIEYLAEKGYDVDTYEGSGSMYQLTKEKIIDEFP 60
Query: 60 DTGIVVSRIGDMITCYIPVHVSFVSE 85
+ GD I I V
Sbjct: 61 IWALQTFEPGDYIGKEIETEYFRVDN 86
>gi|285016827|ref|YP_003374538.1| peptidase precursor [Xanthomonas albilineans GPE PC73]
gi|283472045|emb|CBA14552.1| putative peptidase precursor protein [Xanthomonas albilineans]
Length = 268
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 23/79 (29%), Gaps = 1/79 (1%)
Query: 2 IKELGLSMFIMTTISGCG-LASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
+K++ L I ++ C S + + + + + E
Sbjct: 1 MKQVVLGASIAMLLAACATTTSPTGRTQVVGGISQQQLDQMGVQAFAQAKAKETLDADPK 60
Query: 61 TGIVVSRIGDMITCYIPVH 79
V + + + +P H
Sbjct: 61 HNAYVRCVVNTLVAQLPDH 79
>gi|254933535|ref|ZP_05266894.1| phosphoglycerate mutase [Listeria monocytogenes HPB2262]
gi|293585099|gb|EFF97131.1| phosphoglycerate mutase [Listeria monocytogenes HPB2262]
Length = 270
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 9/95 (9%)
Query: 1 MIK---ELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIV------NKRFGSSLDKAE 51
M K +L +++ + I+GCG ++ KK D + K ++ D+ +
Sbjct: 1 MKKNIFKLMMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFYVVRHGKTMLNTTDRVQ 60
Query: 52 DEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVSEV 86
L G V + + ++ S+
Sbjct: 61 GWSDAVLTPAGEEVVKSAGKGLKDVDFSAAYSSDS 95
>gi|241889510|ref|ZP_04776809.1| phosphonates-binding protein [Gemella haemolysans ATCC 10379]
gi|241863817|gb|EER68200.1| phosphonates-binding protein [Gemella haemolysans ATCC 10379]
Length = 294
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 53/159 (33%), Gaps = 10/159 (6%)
Query: 2 IKELGLSMF---IMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQL 58
+K++ L++F ++ ++ GC S K++ L +++ L+ +L
Sbjct: 1 MKKIFLAIFSVVLLFSLIGCSQKSSTKEEKILKLGVVPSSNSEKLVDDLEPFAKALGEKL 60
Query: 59 QDTGIVVSRIGDMITCYIPVHVSFVSEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTD 118
+ V I I S + L F +L + + I + +
Sbjct: 61 -GMKVEVFTASSYIGV-IEGIGSGSVDFGLVPPFSAVLSN-----KQSNTKNILVGTSRT 113
Query: 119 SIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGF 157
+ + ++ + L + V+ S G+
Sbjct: 114 GKPGYYAEIFVRKDSNIKSLADLKGKKVAFVDPSSASGY 152
>gi|229112009|ref|ZP_04241552.1| Periplasmic binding protein [Bacillus cereus Rock1-15]
gi|228671332|gb|EEL26633.1| Periplasmic binding protein [Bacillus cereus Rock1-15]
Length = 291
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 2 IKEL---GLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNK-RFGSSLDKAEDEF 54
+K++ +++ ++ +I+GC +E K +S + + +D E +
Sbjct: 1 MKKIASVLMAIILLMSIAGCSSPKKEIAKQVKSESKERVVATTVAVTEIMDALEVDL 57
>gi|196045212|ref|ZP_03112444.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus 03BB108]
gi|229182732|ref|ZP_04309972.1| Ferrichrome-binding periplasmic protein [Bacillus cereus BGSC 6E1]
gi|196023796|gb|EDX62471.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus cereus 03BB108]
gi|228600705|gb|EEK58285.1| Ferrichrome-binding periplasmic protein [Bacillus cereus BGSC 6E1]
Length = 305
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 38/117 (32%), Gaps = 5/117 (4%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L +S+ + +S C S +KK ++T G A + + L
Sbjct: 1 MKKLFISLTVLFVLVMSACSNGSTDKKNDAKGSKSETITYQSENGKVEVPANPKRVVVLS 60
Query: 60 DTGIVVSRIGDMIT-CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQ 114
V +G + + + L+ + + + P +I +
Sbjct: 61 SFAGNVMSLGVNLVGVDSWSKQNPRFDSKLKDVA-EVSDENVEKIAELNPDLIIGLS 116
>gi|167640162|ref|ZP_02398429.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. A0193]
gi|177653686|ref|ZP_02935825.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. A0174]
gi|254739041|ref|ZP_05196743.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. Western North America USA6153]
gi|167511973|gb|EDR87352.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. A0193]
gi|172081266|gb|EDT66341.1| iron compound ABC transporter, iron compound-binding protein
[Bacillus anthracis str. A0174]
Length = 305
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 38/117 (32%), Gaps = 5/117 (4%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L +S+ + +S C S +KK ++T G A + + L
Sbjct: 1 MKKLFISLTVLFVLVMSACSNGSTDKKNDAKGSKSETITYQSENGKVEVPANPKRVVVLS 60
Query: 60 DTGIVVSRIGDMIT-CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQ 114
V +G + + + L+ + + + P +I +
Sbjct: 61 SFAGNVMSLGVNLVGVDSWSKQNPRFDSKLKDVA-EVSDENVEKIAELNPDLIIGLS 116
>gi|116871887|ref|YP_848668.1| putative lipoprotein [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116740765|emb|CAK19885.1| putative lipoprotein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 192
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%)
Query: 1 MIKELGLSMFIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQD 60
M K L + +F++ + C L +++ K N + + D + ++
Sbjct: 1 MKKMLVMMLFLVIVSASCSLQNQKVSKNTKIAKNISTQADYEIPKDFDDLVANSKDIVKV 60
Query: 61 TGIVVSRIGDMITCYIPVHVSFVSEVFLEKK 91
I IGD + V + + L+K
Sbjct: 61 KFIKNKDIGDNGSTTSEVEILKAYKGDLKKA 91
>gi|49480054|ref|YP_034670.1| ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49331610|gb|AAT62256.1| ferrichrome-binding periplasmic protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
Length = 305
Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 38/117 (32%), Gaps = 5/117 (4%)
Query: 2 IKELGLSM--FIMTTISGCGLASREKKKVFLHKSNDTDIVNKRFGSSLDKAEDEFQMQLQ 59
+K+L +S+ + +S C S +KK ++T G A + + L
Sbjct: 1 MKKLFISLTVLFVLVMSACSNGSTDKKNDAKGSKSETITYQSENGKVEVPANPKRVVVLS 60
Query: 60 DTGIVVSRIGDMIT-CYIPVHVSFVSEVFLEKKFLPMLQLIATILNK-FPSTVIAIQ 114
V +G + + + L+ + + + P +I +
Sbjct: 61 SFAGNVMSLGVNLVGVDSWSKQNPRFDSKLKDVA-EVSDENVEKIAELNPDLIIGLS 116
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.313 0.137 0.367
Lambda K H
0.267 0.0419 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,190,912,492
Number of Sequences: 14124377
Number of extensions: 36440169
Number of successful extensions: 343449
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 9581
Number of HSP's successfully gapped in prelim test: 6798
Number of HSP's that attempted gapping in prelim test: 324655
Number of HSP's gapped (non-prelim): 18429
length of query: 190
length of database: 4,842,793,630
effective HSP length: 131
effective length of query: 59
effective length of database: 2,992,500,243
effective search space: 176557514337
effective search space used: 176557514337
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 77 (34.2 bits)