RPSBLAST alignment of GI: 254780953 and protein with PDBid: 2k1s
>2k1s_A Inner membrane lipoprotein YIAD; abbababab, OMPA, alpha beta, palmitate, transmembrane, structural genomics, PSI-2; NMR {Escherichia coli K12} Length = 149
Score = 84.5 bits (208), Expect = 1e-17
Identities = 46/139 (33%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Query: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFVS-EVFLEKKFLPMLQLIATILNK 105
+D E + + +++ TG+ V+R GD I +P +V+F S L+ L +A +L +
Sbjct: 3 MDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKE 62
Query: 106 FPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDT 165
+P T + + +TDS G N+ +SQ+RAD + S LI +GV ++R +G PI +
Sbjct: 63 YPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIR-TQGLGPANPIAS 121
Query: 166 NDTKVGRQNNQRIEIQIFP 184
N T G+ N+R+EI + P
Sbjct: 122 NSTAEGKAQNRRVEITLSP 140