RPSBLAST alignment of GI: 254780953 and protein with PDBid: 2zf8

>2zf8_A MOTY, component of sodium-driven polar flagellar motor; beta barrel, 2-layer sandwich, flagellum, structural protein; 2.85A {Vibrio alginolyticus} Length = 278
 Score = 96.5 bits (240), Expect = 3e-21
 Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 88  LEKKFLPMLQLIATILNKFPS-TVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGV 146
           L K     L  IA  +       ++ + ++TDS      +  +S+ RA+ ++ Y    G+
Sbjct: 173 LTKASKKRLSQIADYIRHNQDIDLVLVATYTDSTDGKSASQSLSERRAESLRDYFQSLGL 232

Query: 147 SSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
             +R I V+G+  + PI  N + +G+  N+R+ I +
Sbjct: 233 PEDR-IQVQGYGKRRPIADNGSPIGKDKNRRVVISL 267