RPSBLAST alignment of GI: 254780953 and SCOP domain: d1r1ma_

Alignment
>d1r1ma_ d.79.7.1 (A:) Outer membrane protein class 4, RmpM, C-terminal domain {Neisseria meningitidis [TaxId: 487]} Length = 140
 Score = 60.6 bits (146), Expect = 8e-11
 Identities = 26/137 (18%), Positives = 55/137 (40%), Gaps = 28/137 (20%)

Query: 75  YIPVHVSFVSEVF-------LEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNL 127
           Y+   +S  ++         L  +    L+++A  L++     + ++ HTD +G+ K N 
Sbjct: 3   YVDETISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTDFMGSDKYNQ 62

Query: 128 LISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGR--------------- 172
            +S+ RA V+ + L+  GV  +R IS  G        T   +                  
Sbjct: 63  ALSERRAYVVANNLVSNGVPVSR-ISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREA 121

Query: 173 -----QNNQRIEIQIFP 184
                + ++R++++I  
Sbjct: 122 LIACIEPDRRVDVKIRS 138

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: OmpA-like
family: OmpA-like
domain: Outer membrane protein class 4, RmpM, C-terminal domain
species: Neisseria meningitidis [TaxId: 487]