HHsearch alignment for GI: 254780954 and conserved domain: COG2982
>COG2982 AsmA Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=3.1e-34 Score=221.48 Aligned_cols=156 Identities=23% Similarity=0.414 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCEEEEECCCEEEEEEEEEEECCCCCCC-E
Q ss_conf 588999999999999999998855208588789999999998298199962148997363179994279826899876-0
Q gi|254780954|r 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF-E 80 (380)
Q Consensus 2 mk~ll~~~~~~lvl~~~~~~~~~~~~d~~~~k~~i~~~~s~~~g~~v~i~G~i~~~l~P~p~i~~~~v~i~~~~~~~~-~ 80 (380)
T Consensus 4 ~~~~l~~~l~~~i~~ia~~~~~~~lf~pN~~k~~i~q~v~a~t~~~l~i~Gdi~w~~~P~~~v~l~d~tLs~~g~~~p~~ 83 (648)
T COG2982 4 MRKVLVSLLGILILVIALLAAVLPLFDPNDFKDTIVQQVSAATGRPLAINGDLGWRLWPWPSVILEDITLSNPGAAEPHL 83 (648)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEECCCCEECCCCCCCCCE
T ss_conf 77889999999999999999986526822000899999999858964661676442277650250342634888888746
Q ss_pred EEEEEEEEEEEHHHHHCCCCCCCEEEEECCEEEEEECCCCCCCCCCCC----------CCCCCCCCEEEEEEEEECCEEE
Q ss_conf 678679999870265249710113899644899998888880555555----------5676655236534897287899
Q gi|254780954|r 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK----------STMDMIHNVILEKIHVKGGRIK 150 (380)
Q Consensus 81 ~~~~~~~v~i~l~~Ll~~~~~i~~i~L~~p~i~l~~~~~G~~n~~~~~----------~~~~~~~~~~l~~i~i~~g~i~ 150 (380)
T Consensus 84 v~~~~v~~sla~lpLl~~~l~i~~i~L~~p~i~L~r~~~g~~nw~~~~~~~~~~~~~~~~~~~~~~~~i~~l~v~~g~v~ 163 (648)
T COG2982 84 VSAERVGASLALLPLLSKQLQISQIRLDGPVIRLERLAEGRNNWDAPTAPQDPNTTPSSSSASAWSFDIGSLKVDDGRVI 163 (648)
T ss_pred EEEEEEEEEEEEHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEE
T ss_conf 88540135532003331566401589727557647843443462345676566666666665456756585565166799
Q ss_pred EEECCCC
Q ss_conf 9856888
Q gi|254780954|r 151 IIDQESD 157 (380)
Q Consensus 151 ~~D~~~~ 157 (380)
T Consensus 164 ~~d~~~~ 170 (648)
T COG2982 164 FQDKNSE 170 (648)
T ss_pred EECCCCC
T ss_conf 9524433