HHsearch alignment for GI: 254780954 and conserved domain: COG3164
>COG3164 Predicted membrane protein [Function unknown].
Probab=99.54 E-value=7.5e-13 Score=94.19 Aligned_cols=167 Identities=13% Similarity=0.137 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHCCEEEEECCEEEEECC-CEEEEEEEEEEECCCCCCCE
Q ss_conf 89999999999999999988552085--8878999999999829819996214899736-31799942798268998760
Q gi|254780954|r 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGSFE 80 (380)
Q Consensus 4 ~ll~~~~~~lvl~~~~~~~~~~~~d~--~~~k~~i~~~~s~~~g~~v~i~G~i~~~l~P-~p~i~~~~v~i~~~~~~~~~ 80 (380)
T Consensus 6 ril~~t~a~l~Vl~aL~Vs~lR~llP~v~~~r~qi~~~~~~~tg~pV~i-~~L~~sW~~fgP~l~aq~I~a~~~~g~~-- 82 (1271)
T COG3164 6 RILLLTGAALLVLAALLVSLLRQLLPLVNRYRPQIEDKISSVTGIPVRI-AQLQGSWRNFGPTLEAQDIRAGDPDGGR-- 82 (1271)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE-HHHCCEEECCCCCEEEEEEECCCCCCCE--
T ss_conf 8999998999999999999999988878777899999976531871787-0201513436661687300035876660--
Q ss_pred EEEEEEEEEEEHH-HHHCCCCCCCEEEEECCEEEEEECCCCCCCCCCC-CCCCCCCCC---EEEEEEEEECCEEEEEECC
Q ss_conf 6786799998702-6524971011389964489999888888055555-556766552---3653489728789998568
Q gi|254780954|r 81 SKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-KSTMDMIHN---VILEKIHVKGGRIKIIDQE 155 (380)
Q Consensus 81 ~~~~~~~v~i~l~-~Ll~~~~~i~~i~L~~p~i~l~~~~~G~~n~~~~-~~~~~~~~~---~~l~~i~i~~g~i~~~D~~ 155 (380)
T Consensus 83 l~~~rV~la~d~wqSLl~~q~~f~dLt~-g~~L~lr~~~~g~~s~~g~~~~~~~~~~d~fLrQ~d~fdlrds~is~lt~s 161 (1271)
T COG3164 83 LSAARVTLALDVWQSLLHRQWQFRDLTF-GLQLTLRRDTTGAWSVNGGDGREDGRLSDLFLRQLDRFDLRDSALSFLTPS 161 (1271)
T ss_pred EEEEEEEEHHHHHHHHHCCCEEEEEEEC-CEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCEEEEECCC
T ss_conf 5566665469888666314445102211-227998617864200068987555741689986337434305547873688
Q ss_pred CCCEEEEEEEEEEECCCCCC
Q ss_conf 88178762015662155455
Q gi|254780954|r 156 SDQVYFLSDLNLQISARFLN 175 (380)
Q Consensus 156 ~~~~~~i~~i~l~l~~~~~~ 175 (380)
T Consensus 162 ~-~~a~L~~~~ltw~n~~~R 180 (1271)
T COG3164 162 G-PRAELAIPQLTWLNSPLR 180 (1271)
T ss_pred C-CHHHHCCCCEEEECCCCC
T ss_conf 8-222213533144137754