HHsearch alignment for GI: 254780954 and conserved domain: pfam01203
>pfam01203 GSPII_N Bacterial type II secretion system protein N.
Probab=94.88 E-value=0.22 Score=25.93 Aligned_cols=81 Identities=17% Similarity=0.234 Sum_probs=49.0
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCEEEEECCCEEEEEEEEEEECCCCCCCE
Q ss_conf 588-9999999999999999988552085887899999999982981999621489973631799942798268998760
Q gi|254780954|r 2 LRR-VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFE 80 (380)
Q Consensus 2 mk~-ll~~~~~~lvl~~~~~~~~~~~~d~~~~k~~i~~~~s~~~g~~v~i~G~i~~~l~P~p~i~~~~v~i~~~~~~~~~ 80 (380)
T Consensus 1 Mk~~~~~~~l~~~~~l~~Li~~lPA~--------~v~~~~--~lp~~v~l~-gvsGTlW---~G~a~~v~~~---~---- 59 (251)
T pfam01203 1 MKRKIVIGLLFVVAYLVFLLAHLPAR--------LVLSLA--PLPAGVSLS-GVSGTLW---QGRAKRVSWQ---N---- 59 (251)
T ss_pred CCEEEHHHHHHHHHHHHHHHHHHHHH--------HHHHHC--CCCCCEEEE-CCCCCEE---ECEEEEEEEC---C----
T ss_conf 94453137899999999999985799--------998517--799853894-5455657---1347388998---6----
Q ss_pred EEEEEEEEEEEHHHHHCCCCCCC
Q ss_conf 67867999987026524971011
Q gi|254780954|r 81 SKIEGLSMRAEFLPLLSGEIRVF 103 (380)
Q Consensus 81 ~~~~~~~v~i~l~~Ll~~~~~i~ 103 (380)
T Consensus 60 ~~lg~V~W~l~p~~Ll~G~~~~~ 82 (251)
T pfam01203 60 LPLGRVSWSLSPLSLLTGRLKLD 82 (251)
T ss_pred EECCEEEEEEEHHHHHCCCEEEE
T ss_conf 83200799962899717875899